11c2a3de1SBarry Smith 2397b6df1SKris Buschelman /* 3c2b5dc30SHong Zhang Provides an interface to the MUMPS sparse solver 4397b6df1SKris Buschelman */ 551d5961aSHong Zhang 6c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> /*I "petscmat.h" I*/ 7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> 87ee00b23SStefano Zampini #include <../src/mat/impls/sell/mpi/mpisell.h> 9397b6df1SKris Buschelman 10397b6df1SKris Buschelman EXTERN_C_BEGIN 11397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 122907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 132907cef9SHong Zhang #include <cmumps_c.h> 142907cef9SHong Zhang #else 15c6db04a5SJed Brown #include <zmumps_c.h> 162907cef9SHong Zhang #endif 172907cef9SHong Zhang #else 182907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 192907cef9SHong Zhang #include <smumps_c.h> 20397b6df1SKris Buschelman #else 21c6db04a5SJed Brown #include <dmumps_c.h> 22397b6df1SKris Buschelman #endif 232907cef9SHong Zhang #endif 24397b6df1SKris Buschelman EXTERN_C_END 25397b6df1SKris Buschelman #define JOB_INIT -1 263d472b54SHong Zhang #define JOB_FACTSYMBOLIC 1 273d472b54SHong Zhang #define JOB_FACTNUMERIC 2 283d472b54SHong Zhang #define JOB_SOLVE 3 29397b6df1SKris Buschelman #define JOB_END -2 303d472b54SHong Zhang 312907cef9SHong Zhang /* calls to MUMPS */ 322907cef9SHong Zhang #if defined(PETSC_USE_COMPLEX) 332907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 343ab56b82SJunchao Zhang #define MUMPS_c cmumps_c 352907cef9SHong Zhang #else 363ab56b82SJunchao Zhang #define MUMPS_c zmumps_c 372907cef9SHong Zhang #endif 382907cef9SHong Zhang #else 392907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 403ab56b82SJunchao Zhang #define MUMPS_c smumps_c 412907cef9SHong Zhang #else 423ab56b82SJunchao Zhang #define MUMPS_c dmumps_c 432907cef9SHong Zhang #endif 442907cef9SHong Zhang #endif 452907cef9SHong Zhang 46217d3b1eSJunchao Zhang /* if using PETSc OpenMP support, we only call MUMPS on master ranks. Before/after the call, we change/restore CPUs the master ranks can run on */ 473ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 483ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 493ab56b82SJunchao Zhang do { \ 503ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { \ 513ab56b82SJunchao Zhang if (mumps->is_omp_master) { \ 523ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterBegin(mumps->omp_ctrl);CHKERRQ(ierr); \ 533ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 543ab56b82SJunchao Zhang ierr = PetscOmpCtrlOmpRegionOnMasterEnd(mumps->omp_ctrl);CHKERRQ(ierr); \ 553ab56b82SJunchao Zhang } \ 563ab56b82SJunchao Zhang ierr = PetscOmpCtrlBarrier(mumps->omp_ctrl);CHKERRQ(ierr); \ 57*c3714a1dSJunchao Zhang /* Global info is same on all processes so we Bcast it within omp_comm. Local info is specific \ 58*c3714a1dSJunchao Zhang to processes, so we only Bcast info[1], an error code and leave others (since they do not have \ 59*c3714a1dSJunchao Zhang an easy translation between omp_comm and petsc_comm). See MUMPS-5.1.2 manual p82. \ 60*c3714a1dSJunchao Zhang omp_comm is a small shared memory communicator, hence doing multiple Bcast as shown below is OK. \ 61*c3714a1dSJunchao Zhang */ \ 62*c3714a1dSJunchao Zhang ierr = MPI_Bcast(mumps->id.infog, 40,MPI_INT, 0,mumps->omp_comm);CHKERRQ(ierr); \ 63*c3714a1dSJunchao Zhang ierr = MPI_Bcast(mumps->id.rinfog,20,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); \ 64*c3714a1dSJunchao Zhang ierr = MPI_Bcast(mumps->id.info, 1, MPI_INT, 0,mumps->omp_comm);CHKERRQ(ierr); \ 653ab56b82SJunchao Zhang } else { \ 663ab56b82SJunchao Zhang MUMPS_c(&mumps->id); \ 673ab56b82SJunchao Zhang } \ 683ab56b82SJunchao Zhang } while(0) 693ab56b82SJunchao Zhang #else 703ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \ 713ab56b82SJunchao Zhang do { MUMPS_c(&mumps->id); } while (0) 723ab56b82SJunchao Zhang #endif 733ab56b82SJunchao Zhang 74940cd9d6SSatish Balay /* declare MumpsScalar */ 75940cd9d6SSatish Balay #if defined(PETSC_USE_COMPLEX) 76940cd9d6SSatish Balay #if defined(PETSC_USE_REAL_SINGLE) 77940cd9d6SSatish Balay #define MumpsScalar mumps_complex 78940cd9d6SSatish Balay #else 79940cd9d6SSatish Balay #define MumpsScalar mumps_double_complex 80940cd9d6SSatish Balay #endif 81940cd9d6SSatish Balay #else 82940cd9d6SSatish Balay #define MumpsScalar PetscScalar 83940cd9d6SSatish Balay #endif 843d472b54SHong Zhang 85397b6df1SKris Buschelman /* macros s.t. indices match MUMPS documentation */ 86397b6df1SKris Buschelman #define ICNTL(I) icntl[(I)-1] 87397b6df1SKris Buschelman #define CNTL(I) cntl[(I)-1] 88397b6df1SKris Buschelman #define INFOG(I) infog[(I)-1] 89a7aca84bSHong Zhang #define INFO(I) info[(I)-1] 90397b6df1SKris Buschelman #define RINFOG(I) rinfog[(I)-1] 91adc1d99fSHong Zhang #define RINFO(I) rinfo[(I)-1] 92397b6df1SKris Buschelman 93397b6df1SKris Buschelman typedef struct { 94397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX) 952907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 962907cef9SHong Zhang CMUMPS_STRUC_C id; 972907cef9SHong Zhang #else 98397b6df1SKris Buschelman ZMUMPS_STRUC_C id; 992907cef9SHong Zhang #endif 1002907cef9SHong Zhang #else 1012907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE) 1022907cef9SHong Zhang SMUMPS_STRUC_C id; 103397b6df1SKris Buschelman #else 104397b6df1SKris Buschelman DMUMPS_STRUC_C id; 105397b6df1SKris Buschelman #endif 1062907cef9SHong Zhang #endif 1072907cef9SHong Zhang 108397b6df1SKris Buschelman MatStructure matstruc; 1092d4298aeSJunchao Zhang PetscMPIInt myid,petsc_size; 110a5e57a09SHong Zhang PetscInt *irn,*jcn,nz,sym; 111397b6df1SKris Buschelman PetscScalar *val; 1122d4298aeSJunchao Zhang MPI_Comm mumps_comm; 113a5e57a09SHong Zhang PetscInt ICNTL9_pre; /* check if ICNTL(9) is changed from previous MatSolve */ 114801fbe65SHong Zhang VecScatter scat_rhs, scat_sol; /* used by MatSolve() */ 115801fbe65SHong Zhang Vec b_seq,x_seq; 116b34f08ffSHong Zhang PetscInt ninfo,*info; /* display INFO */ 117b5fa320bSStefano Zampini PetscInt sizeredrhs; 11859ac8732SStefano Zampini PetscScalar *schur_sol; 11959ac8732SStefano Zampini PetscInt schur_sizesol; 1202205254eSKarl Rupp 1213ab56b82SJunchao Zhang PetscBool use_petsc_omp_support; 1223ab56b82SJunchao Zhang PetscOmpCtrl omp_ctrl; /* an OpenMP controler that blocked processes will release their CPU (MPI_Barrier does not have this guarantee) */ 1233ab56b82SJunchao Zhang MPI_Comm petsc_comm,omp_comm; /* petsc_comm is petsc matrix's comm */ 1243ab56b82SJunchao Zhang PetscMPIInt mpinz; /* on master rank, nz = sum(mpinz) over omp_comm; on other ranks, mpinz = nz*/ 1253ab56b82SJunchao Zhang PetscMPIInt omp_comm_size; 1263ab56b82SJunchao Zhang PetscBool is_omp_master; /* is this rank the master of omp_comm */ 1273ab56b82SJunchao Zhang PetscMPIInt *recvcount,*displs; 1283ab56b82SJunchao Zhang 129bccb9932SShri Abhyankar PetscErrorCode (*ConvertToTriples)(Mat, int, MatReuse, int*, int**, int**, PetscScalar**); 130f0c56d0fSKris Buschelman } Mat_MUMPS; 131f0c56d0fSKris Buschelman 13209573ac7SBarry Smith extern PetscErrorCode MatDuplicate_MUMPS(Mat,MatDuplicateOption,Mat*); 133b24902e0SBarry Smith 13459ac8732SStefano Zampini static PetscErrorCode MatMumpsResetSchur_Private(Mat_MUMPS* mumps) 135b5fa320bSStefano Zampini { 136b5fa320bSStefano Zampini PetscErrorCode ierr; 137b5fa320bSStefano Zampini 138b5fa320bSStefano Zampini PetscFunctionBegin; 139a3d589ffSStefano Zampini ierr = PetscFree(mumps->id.listvar_schur);CHKERRQ(ierr); 14059ac8732SStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 14159ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 14259ac8732SStefano Zampini mumps->id.size_schur = 0; 143b3cb21ddSStefano Zampini mumps->id.schur_lld = 0; 14459ac8732SStefano Zampini mumps->id.ICNTL(19) = 0; 14559ac8732SStefano Zampini PetscFunctionReturn(0); 14659ac8732SStefano Zampini } 14759ac8732SStefano Zampini 148b3cb21ddSStefano Zampini /* solve with rhs in mumps->id.redrhs and return in the same location */ 149b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsSolveSchur_Private(Mat F) 15059ac8732SStefano Zampini { 151b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 152b3cb21ddSStefano Zampini Mat S,B,X; 153b3cb21ddSStefano Zampini MatFactorSchurStatus schurstatus; 154b3cb21ddSStefano Zampini PetscInt sizesol; 15559ac8732SStefano Zampini PetscErrorCode ierr; 15659ac8732SStefano Zampini 15759ac8732SStefano Zampini PetscFunctionBegin; 158b3cb21ddSStefano Zampini ierr = MatFactorFactorizeSchurComplement(F);CHKERRQ(ierr); 159b3cb21ddSStefano Zampini ierr = MatFactorGetSchurComplement(F,&S,&schurstatus);CHKERRQ(ierr); 160b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&B);CHKERRQ(ierr); 161c4163675SStefano Zampini ierr = MatSetType(B,((PetscObject)S)->type_name);CHKERRQ(ierr); 162a3d589ffSStefano Zampini #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) 163a3d589ffSStefano Zampini ierr = MatPinToCPU(B,S->pinnedtocpu);CHKERRQ(ierr); 164a3d589ffSStefano Zampini #endif 165b3cb21ddSStefano Zampini switch (schurstatus) { 166b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_FACTORED: 167b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&X);CHKERRQ(ierr); 168c4163675SStefano Zampini ierr = MatSetType(X,((PetscObject)S)->type_name);CHKERRQ(ierr); 169a3d589ffSStefano Zampini #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) 170a3d589ffSStefano Zampini ierr = MatPinToCPU(X,S->pinnedtocpu);CHKERRQ(ierr); 171a3d589ffSStefano Zampini #endif 172b3cb21ddSStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 173b3cb21ddSStefano Zampini ierr = MatMatSolveTranspose(S,B,X);CHKERRQ(ierr); 17459ac8732SStefano Zampini } else { 175b3cb21ddSStefano Zampini ierr = MatMatSolve(S,B,X);CHKERRQ(ierr); 17659ac8732SStefano Zampini } 177b3cb21ddSStefano Zampini break; 178b3cb21ddSStefano Zampini case MAT_FACTOR_SCHUR_INVERTED: 179b3cb21ddSStefano Zampini sizesol = mumps->id.nrhs*mumps->id.size_schur; 18059ac8732SStefano Zampini if (!mumps->schur_sol || sizesol > mumps->schur_sizesol) { 18159ac8732SStefano Zampini ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr); 18259ac8732SStefano Zampini ierr = PetscMalloc1(sizesol,&mumps->schur_sol);CHKERRQ(ierr); 18359ac8732SStefano Zampini mumps->schur_sizesol = sizesol; 184b5fa320bSStefano Zampini } 185b3cb21ddSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,mumps->schur_sol,&X);CHKERRQ(ierr); 186c4163675SStefano Zampini ierr = MatSetType(X,((PetscObject)S)->type_name);CHKERRQ(ierr); 187a3d589ffSStefano Zampini #if defined(PETSC_HAVE_VIENNACL) || defined(PETSC_HAVE_CUDA) 188a3d589ffSStefano Zampini ierr = MatPinToCPU(X,S->pinnedtocpu);CHKERRQ(ierr); 189a3d589ffSStefano Zampini #endif 19059ac8732SStefano Zampini if (!mumps->id.ICNTL(9)) { /* transpose solve */ 191b3cb21ddSStefano Zampini ierr = MatTransposeMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 192b5fa320bSStefano Zampini } else { 193b3cb21ddSStefano Zampini ierr = MatMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr); 194b5fa320bSStefano Zampini } 195b3cb21ddSStefano Zampini ierr = MatCopy(X,B,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 196b3cb21ddSStefano Zampini break; 197b3cb21ddSStefano Zampini default: 198b3cb21ddSStefano Zampini SETERRQ1(PetscObjectComm((PetscObject)F),PETSC_ERR_SUP,"Unhandled MatFactorSchurStatus %D",F->schur_status); 199b3cb21ddSStefano Zampini break; 20059ac8732SStefano Zampini } 201b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,&S,schurstatus);CHKERRQ(ierr); 202b3cb21ddSStefano Zampini ierr = MatDestroy(&B);CHKERRQ(ierr); 203b3cb21ddSStefano Zampini ierr = MatDestroy(&X);CHKERRQ(ierr); 204b5fa320bSStefano Zampini PetscFunctionReturn(0); 205b5fa320bSStefano Zampini } 206b5fa320bSStefano Zampini 207b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsHandleSchur_Private(Mat F, PetscBool expansion) 208b5fa320bSStefano Zampini { 209b3cb21ddSStefano Zampini Mat_MUMPS *mumps=(Mat_MUMPS*)F->data; 210b5fa320bSStefano Zampini PetscErrorCode ierr; 211b5fa320bSStefano Zampini 212b5fa320bSStefano Zampini PetscFunctionBegin; 213b5fa320bSStefano Zampini if (!mumps->id.ICNTL(19)) { /* do nothing when Schur complement has not been computed */ 214b5fa320bSStefano Zampini PetscFunctionReturn(0); 215b5fa320bSStefano Zampini } 216b8f61ee1SStefano Zampini if (!expansion) { /* prepare for the condensation step */ 217b5fa320bSStefano Zampini PetscInt sizeredrhs = mumps->id.nrhs*mumps->id.size_schur; 218b5fa320bSStefano Zampini /* allocate MUMPS internal array to store reduced right-hand sides */ 219b5fa320bSStefano Zampini if (!mumps->id.redrhs || sizeredrhs > mumps->sizeredrhs) { 220b5fa320bSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 221b5fa320bSStefano Zampini mumps->id.lredrhs = mumps->id.size_schur; 222b5fa320bSStefano Zampini ierr = PetscMalloc1(mumps->id.nrhs*mumps->id.lredrhs,&mumps->id.redrhs);CHKERRQ(ierr); 223b5fa320bSStefano Zampini mumps->sizeredrhs = mumps->id.nrhs*mumps->id.lredrhs; 224b5fa320bSStefano Zampini } 225b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 1; /* condensation phase */ 226b5fa320bSStefano Zampini } else { /* prepare for the expansion step */ 227b8f61ee1SStefano Zampini /* solve Schur complement (this has to be done by the MUMPS user, so basically us) */ 228b3cb21ddSStefano Zampini ierr = MatMumpsSolveSchur_Private(F);CHKERRQ(ierr); 229b5fa320bSStefano Zampini mumps->id.ICNTL(26) = 2; /* expansion phase */ 2303ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 231b5fa320bSStefano Zampini if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 232b5fa320bSStefano Zampini /* restore defaults */ 233b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 234d3d598ffSStefano Zampini /* free MUMPS internal array for redrhs if we have solved for multiple rhs in order to save memory space */ 235d3d598ffSStefano Zampini if (mumps->id.nrhs > 1) { 236d3d598ffSStefano Zampini ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr); 237d3d598ffSStefano Zampini mumps->id.lredrhs = 0; 238d3d598ffSStefano Zampini mumps->sizeredrhs = 0; 239d3d598ffSStefano Zampini } 240b5fa320bSStefano Zampini } 241b5fa320bSStefano Zampini PetscFunctionReturn(0); 242b5fa320bSStefano Zampini } 243b5fa320bSStefano Zampini 244397b6df1SKris Buschelman /* 245d341cd04SHong Zhang MatConvertToTriples_A_B - convert Petsc matrix to triples: row[nz], col[nz], val[nz] 246d341cd04SHong Zhang 247397b6df1SKris Buschelman input: 24875480915SPierre Jolivet A - matrix in aij,baij or sbaij format 249397b6df1SKris Buschelman shift - 0: C style output triple; 1: Fortran style output triple. 250bccb9932SShri Abhyankar reuse - MAT_INITIAL_MATRIX: spaces are allocated and values are set for the triple 251bccb9932SShri Abhyankar MAT_REUSE_MATRIX: only the values in v array are updated 252397b6df1SKris Buschelman output: 253397b6df1SKris Buschelman nnz - dim of r, c, and v (number of local nonzero entries of A) 254397b6df1SKris Buschelman r, c, v - row and col index, matrix values (matrix triples) 255eb9baa12SBarry Smith 256eb9baa12SBarry Smith The returned values r, c, and sometimes v are obtained in a single PetscMalloc(). Then in MatDestroy_MUMPS() it is 2577ee00b23SStefano Zampini freed with PetscFree(mumps->irn); This is not ideal code, the fact that v is ONLY sometimes part of mumps->irn means 258eb9baa12SBarry Smith that the PetscMalloc() cannot easily be replaced with a PetscMalloc3(). 259eb9baa12SBarry Smith 260397b6df1SKris Buschelman */ 26116ebf90aSShri Abhyankar 262bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 263b24902e0SBarry Smith { 264a3d589ffSStefano Zampini const PetscScalar *av; 265185f6596SHong Zhang const PetscInt *ai,*aj,*ajj,M=A->rmap->n; 26667877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 267dfbe8321SBarry Smith PetscErrorCode ierr; 268c1490034SHong Zhang PetscInt *row,*col; 26916ebf90aSShri Abhyankar Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 270397b6df1SKris Buschelman 271397b6df1SKris Buschelman PetscFunctionBegin; 272a3d589ffSStefano Zampini ierr = MatSeqAIJGetArrayRead(A,&av);CHKERRQ(ierr); 273a3d589ffSStefano Zampini *v = (PetscScalar*)av; 274bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 2752205254eSKarl Rupp nz = aa->nz; 2762205254eSKarl Rupp ai = aa->i; 2772205254eSKarl Rupp aj = aa->j; 27816ebf90aSShri Abhyankar *nnz = nz; 279785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 280185f6596SHong Zhang col = row + nz; 281185f6596SHong Zhang 28216ebf90aSShri Abhyankar nz = 0; 28316ebf90aSShri Abhyankar for (i=0; i<M; i++) { 28416ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 28567877ebaSShri Abhyankar ajj = aj + ai[i]; 28667877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 28767877ebaSShri Abhyankar row[nz] = i+shift; col[nz++] = ajj[j] + shift; 28816ebf90aSShri Abhyankar } 28916ebf90aSShri Abhyankar } 29016ebf90aSShri Abhyankar *r = row; *c = col; 29116ebf90aSShri Abhyankar } 292a3d589ffSStefano Zampini ierr = MatSeqAIJRestoreArrayRead(A,&av);CHKERRQ(ierr); 29316ebf90aSShri Abhyankar PetscFunctionReturn(0); 29416ebf90aSShri Abhyankar } 295397b6df1SKris Buschelman 2967ee00b23SStefano Zampini PetscErrorCode MatConvertToTriples_seqsell_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 2977ee00b23SStefano Zampini { 2987ee00b23SStefano Zampini Mat_SeqSELL *a=(Mat_SeqSELL*)A->data; 2997ee00b23SStefano Zampini PetscInt *ptr; 3007ee00b23SStefano Zampini 3017ee00b23SStefano Zampini PetscFunctionBegin; 3027ee00b23SStefano Zampini *v = a->val; 3037ee00b23SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 3047ee00b23SStefano Zampini PetscInt nz,i,j,row; 3057ee00b23SStefano Zampini PetscErrorCode ierr; 3067ee00b23SStefano Zampini 3077ee00b23SStefano Zampini nz = a->sliidx[a->totalslices]; 3087ee00b23SStefano Zampini *nnz = nz; 3097ee00b23SStefano Zampini ierr = PetscMalloc1(2*nz, &ptr);CHKERRQ(ierr); 3107ee00b23SStefano Zampini *r = ptr; 3117ee00b23SStefano Zampini *c = ptr + nz; 3127ee00b23SStefano Zampini 3137ee00b23SStefano Zampini for (i=0; i<a->totalslices; i++) { 3147ee00b23SStefano Zampini for (j=a->sliidx[i],row=0; j<a->sliidx[i+1]; j++,row=((row+1)&0x07)) { 3157ee00b23SStefano Zampini *ptr++ = 8*i + row + shift; 3167ee00b23SStefano Zampini } 3177ee00b23SStefano Zampini } 3187ee00b23SStefano Zampini for (i=0;i<nz;i++) *ptr++ = a->colidx[i] + shift; 3197ee00b23SStefano Zampini } 3207ee00b23SStefano Zampini PetscFunctionReturn(0); 3217ee00b23SStefano Zampini } 3227ee00b23SStefano Zampini 323bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqbaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 32467877ebaSShri Abhyankar { 32567877ebaSShri Abhyankar Mat_SeqBAIJ *aa=(Mat_SeqBAIJ*)A->data; 32633d57670SJed Brown const PetscInt *ai,*aj,*ajj,bs2 = aa->bs2; 32733d57670SJed Brown PetscInt bs,M,nz,idx=0,rnz,i,j,k,m; 32867877ebaSShri Abhyankar PetscErrorCode ierr; 32967877ebaSShri Abhyankar PetscInt *row,*col; 33067877ebaSShri Abhyankar 33167877ebaSShri Abhyankar PetscFunctionBegin; 33233d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 33333d57670SJed Brown M = A->rmap->N/bs; 334cf3759fdSShri Abhyankar *v = aa->a; 335bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 336cf3759fdSShri Abhyankar ai = aa->i; aj = aa->j; 33767877ebaSShri Abhyankar nz = bs2*aa->nz; 33867877ebaSShri Abhyankar *nnz = nz; 339785e854fSJed Brown ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr); 340185f6596SHong Zhang col = row + nz; 341185f6596SHong Zhang 34267877ebaSShri Abhyankar for (i=0; i<M; i++) { 34367877ebaSShri Abhyankar ajj = aj + ai[i]; 34467877ebaSShri Abhyankar rnz = ai[i+1] - ai[i]; 34567877ebaSShri Abhyankar for (k=0; k<rnz; k++) { 34667877ebaSShri Abhyankar for (j=0; j<bs; j++) { 34767877ebaSShri Abhyankar for (m=0; m<bs; m++) { 34867877ebaSShri Abhyankar row[idx] = i*bs + m + shift; 349cf3759fdSShri Abhyankar col[idx++] = bs*(ajj[k]) + j + shift; 35067877ebaSShri Abhyankar } 35167877ebaSShri Abhyankar } 35267877ebaSShri Abhyankar } 35367877ebaSShri Abhyankar } 354cf3759fdSShri Abhyankar *r = row; *c = col; 35567877ebaSShri Abhyankar } 35667877ebaSShri Abhyankar PetscFunctionReturn(0); 35767877ebaSShri Abhyankar } 35867877ebaSShri Abhyankar 359bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqsbaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r,int **c,PetscScalar **v) 36016ebf90aSShri Abhyankar { 36175480915SPierre Jolivet const PetscInt *ai, *aj,*ajj; 36275480915SPierre Jolivet PetscInt nz,rnz,i,j,k,m,bs; 36316ebf90aSShri Abhyankar PetscErrorCode ierr; 36416ebf90aSShri Abhyankar PetscInt *row,*col; 36575480915SPierre Jolivet PetscScalar *val; 36616ebf90aSShri Abhyankar Mat_SeqSBAIJ *aa=(Mat_SeqSBAIJ*)A->data; 36775480915SPierre Jolivet const PetscInt bs2=aa->bs2,mbs=aa->mbs; 36838548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 36938548759SBarry Smith PetscBool hermitian; 37038548759SBarry Smith #endif 37116ebf90aSShri Abhyankar 37216ebf90aSShri Abhyankar PetscFunctionBegin; 37338548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 37438548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 37538548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 37638548759SBarry Smith #endif 3772205254eSKarl Rupp ai = aa->i; 3782205254eSKarl Rupp aj = aa->j; 37975480915SPierre Jolivet ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 38075480915SPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) { 38175480915SPierre Jolivet nz = aa->nz; 382a81fe166SPierre Jolivet ierr = PetscMalloc((2*bs2*nz*sizeof(PetscInt)+(bs>1?bs2*nz*sizeof(PetscScalar):0)), &row);CHKERRQ(ierr); 38375480915SPierre Jolivet col = row + bs2*nz; 384574ea4fdSPierre Jolivet if (bs>1) val = (PetscScalar*)(col + bs2*nz); 385574ea4fdSPierre Jolivet else val = aa->a; 38675480915SPierre Jolivet 38775480915SPierre Jolivet *r = row; *c = col; *v = val; 38875480915SPierre Jolivet } else { 389574ea4fdSPierre Jolivet if (bs == 1) *v = aa->a; 39075480915SPierre Jolivet row = *r; col = *c; val = *v; 39175480915SPierre Jolivet } 392185f6596SHong Zhang 39316ebf90aSShri Abhyankar nz = 0; 394a81fe166SPierre Jolivet if (bs>1) { 39575480915SPierre Jolivet for (i=0; i<mbs; i++) { 39616ebf90aSShri Abhyankar rnz = ai[i+1] - ai[i]; 39767877ebaSShri Abhyankar ajj = aj + ai[i]; 39875480915SPierre Jolivet for (j=0; j<rnz; j++) { 39975480915SPierre Jolivet for (k=0; k<bs; k++) { 40075480915SPierre Jolivet for (m=0; m<bs; m++) { 401ec4f40fdSPierre Jolivet if (ajj[j]>i || k>=m) { 40275480915SPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) { 40375480915SPierre Jolivet row[nz] = i*bs + m + shift; 40475480915SPierre Jolivet col[nz] = ajj[j]*bs + k + shift; 40575480915SPierre Jolivet } 40675480915SPierre Jolivet val[nz++] = aa->a[(ai[i]+j)*bs2 + m + k*bs]; 40775480915SPierre Jolivet } 40875480915SPierre Jolivet } 40975480915SPierre Jolivet } 41075480915SPierre Jolivet } 41175480915SPierre Jolivet } 412a81fe166SPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) { 413a81fe166SPierre Jolivet for (i=0; i<mbs; i++) { 414a81fe166SPierre Jolivet rnz = ai[i+1] - ai[i]; 415a81fe166SPierre Jolivet ajj = aj + ai[i]; 416a81fe166SPierre Jolivet for (j=0; j<rnz; j++) { 417a81fe166SPierre Jolivet row[nz] = i+shift; col[nz++] = ajj[j] + shift; 418a81fe166SPierre Jolivet } 419a81fe166SPierre Jolivet } 420a81fe166SPierre Jolivet if (nz != aa->nz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Different numbers of nonzeros %D != %D",nz,aa->nz); 42175480915SPierre Jolivet } 422574ea4fdSPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) *nnz = nz; 42316ebf90aSShri Abhyankar PetscFunctionReturn(0); 42416ebf90aSShri Abhyankar } 42516ebf90aSShri Abhyankar 426bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 42716ebf90aSShri Abhyankar { 42867877ebaSShri Abhyankar const PetscInt *ai,*aj,*ajj,*adiag,M=A->rmap->n; 42967877ebaSShri Abhyankar PetscInt nz,rnz,i,j; 43067877ebaSShri Abhyankar const PetscScalar *av,*v1; 43116ebf90aSShri Abhyankar PetscScalar *val; 43216ebf90aSShri Abhyankar PetscErrorCode ierr; 43316ebf90aSShri Abhyankar PetscInt *row,*col; 434829b1710SHong Zhang Mat_SeqAIJ *aa=(Mat_SeqAIJ*)A->data; 43529b521d4Sstefano_zampini PetscBool missing; 43638548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 43738548759SBarry Smith PetscBool hermitian; 43838548759SBarry Smith #endif 43916ebf90aSShri Abhyankar 44016ebf90aSShri Abhyankar PetscFunctionBegin; 44138548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 44238548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 44338548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 44438548759SBarry Smith #endif 445a3d589ffSStefano Zampini ierr = MatSeqAIJGetArrayRead(A,&av);CHKERRQ(ierr); 446a3d589ffSStefano Zampini ai = aa->i; aj = aa->j; 44716ebf90aSShri Abhyankar adiag = aa->diag; 44829b521d4Sstefano_zampini ierr = MatMissingDiagonal_SeqAIJ(A,&missing,&i);CHKERRQ(ierr); 449bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 4507ee00b23SStefano Zampini /* count nz in the upper triangular part of A */ 451829b1710SHong Zhang nz = 0; 45229b521d4Sstefano_zampini if (missing) { 45329b521d4Sstefano_zampini for (i=0; i<M; i++) { 45429b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 45529b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 45629b521d4Sstefano_zampini if (aj[j] < i) continue; 45729b521d4Sstefano_zampini nz++; 45829b521d4Sstefano_zampini } 45929b521d4Sstefano_zampini } else { 46029b521d4Sstefano_zampini nz += ai[i+1] - adiag[i]; 46129b521d4Sstefano_zampini } 46229b521d4Sstefano_zampini } 46329b521d4Sstefano_zampini } else { 464829b1710SHong Zhang for (i=0; i<M; i++) nz += ai[i+1] - adiag[i]; 46529b521d4Sstefano_zampini } 46616ebf90aSShri Abhyankar *nnz = nz; 467829b1710SHong Zhang 468185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 469185f6596SHong Zhang col = row + nz; 470185f6596SHong Zhang val = (PetscScalar*)(col + nz); 471185f6596SHong Zhang 47216ebf90aSShri Abhyankar nz = 0; 47329b521d4Sstefano_zampini if (missing) { 47429b521d4Sstefano_zampini for (i=0; i<M; i++) { 47529b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 47629b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 47729b521d4Sstefano_zampini if (aj[j] < i) continue; 47829b521d4Sstefano_zampini row[nz] = i+shift; 47929b521d4Sstefano_zampini col[nz] = aj[j]+shift; 48029b521d4Sstefano_zampini val[nz] = av[j]; 48129b521d4Sstefano_zampini nz++; 48229b521d4Sstefano_zampini } 48329b521d4Sstefano_zampini } else { 48429b521d4Sstefano_zampini rnz = ai[i+1] - adiag[i]; 48529b521d4Sstefano_zampini ajj = aj + adiag[i]; 48629b521d4Sstefano_zampini v1 = av + adiag[i]; 48729b521d4Sstefano_zampini for (j=0; j<rnz; j++) { 48829b521d4Sstefano_zampini row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 48929b521d4Sstefano_zampini } 49029b521d4Sstefano_zampini } 49129b521d4Sstefano_zampini } 49229b521d4Sstefano_zampini } else { 49316ebf90aSShri Abhyankar for (i=0; i<M; i++) { 49416ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 49567877ebaSShri Abhyankar ajj = aj + adiag[i]; 496cf3759fdSShri Abhyankar v1 = av + adiag[i]; 49767877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 49867877ebaSShri Abhyankar row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j]; 49916ebf90aSShri Abhyankar } 50016ebf90aSShri Abhyankar } 50129b521d4Sstefano_zampini } 50216ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 503397b6df1SKris Buschelman } else { 50416ebf90aSShri Abhyankar nz = 0; val = *v; 50529b521d4Sstefano_zampini if (missing) { 50616ebf90aSShri Abhyankar for (i=0; i <M; i++) { 50729b521d4Sstefano_zampini if (PetscUnlikely(adiag[i] >= ai[i+1])) { 50829b521d4Sstefano_zampini for (j=ai[i];j<ai[i+1];j++) { 50929b521d4Sstefano_zampini if (aj[j] < i) continue; 51029b521d4Sstefano_zampini val[nz++] = av[j]; 51129b521d4Sstefano_zampini } 51229b521d4Sstefano_zampini } else { 51316ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 51467877ebaSShri Abhyankar v1 = av + adiag[i]; 51567877ebaSShri Abhyankar for (j=0; j<rnz; j++) { 51667877ebaSShri Abhyankar val[nz++] = v1[j]; 51716ebf90aSShri Abhyankar } 51816ebf90aSShri Abhyankar } 51916ebf90aSShri Abhyankar } 52029b521d4Sstefano_zampini } else { 52116ebf90aSShri Abhyankar for (i=0; i <M; i++) { 52216ebf90aSShri Abhyankar rnz = ai[i+1] - adiag[i]; 52316ebf90aSShri Abhyankar v1 = av + adiag[i]; 52416ebf90aSShri Abhyankar for (j=0; j<rnz; j++) { 52516ebf90aSShri Abhyankar val[nz++] = v1[j]; 52616ebf90aSShri Abhyankar } 52716ebf90aSShri Abhyankar } 52816ebf90aSShri Abhyankar } 52929b521d4Sstefano_zampini } 530a3d589ffSStefano Zampini ierr = MatSeqAIJRestoreArrayRead(A,&av);CHKERRQ(ierr); 53116ebf90aSShri Abhyankar PetscFunctionReturn(0); 53216ebf90aSShri Abhyankar } 53316ebf90aSShri Abhyankar 534bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpisbaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r,int **c, PetscScalar **v) 53516ebf90aSShri Abhyankar { 536ec4f40fdSPierre Jolivet const PetscInt *ai,*aj,*bi,*bj,*garray,*ajj,*bjj; 53716ebf90aSShri Abhyankar PetscErrorCode ierr; 538ec4f40fdSPierre Jolivet PetscInt rstart,nz,bs,i,j,k,m,jj,irow,countA,countB; 53916ebf90aSShri Abhyankar PetscInt *row,*col; 54016ebf90aSShri Abhyankar const PetscScalar *av,*bv,*v1,*v2; 54116ebf90aSShri Abhyankar PetscScalar *val; 542397b6df1SKris Buschelman Mat_MPISBAIJ *mat = (Mat_MPISBAIJ*)A->data; 543397b6df1SKris Buschelman Mat_SeqSBAIJ *aa = (Mat_SeqSBAIJ*)(mat->A)->data; 544397b6df1SKris Buschelman Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 545ec4f40fdSPierre Jolivet const PetscInt bs2=aa->bs2,mbs=aa->mbs; 54638548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 54738548759SBarry Smith PetscBool hermitian; 54838548759SBarry Smith #endif 54916ebf90aSShri Abhyankar 55016ebf90aSShri Abhyankar PetscFunctionBegin; 55138548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 55238548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 55338548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 55438548759SBarry Smith #endif 555ec4f40fdSPierre Jolivet ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 55638548759SBarry Smith rstart = A->rmap->rstart; 55738548759SBarry Smith ai = aa->i; 55838548759SBarry Smith aj = aa->j; 55938548759SBarry Smith bi = bb->i; 56038548759SBarry Smith bj = bb->j; 56138548759SBarry Smith av = aa->a; 56238548759SBarry Smith bv = bb->a; 563397b6df1SKris Buschelman 5642205254eSKarl Rupp garray = mat->garray; 5652205254eSKarl Rupp 566bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 56716ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 568ec4f40fdSPierre Jolivet ierr = PetscMalloc((2*bs2*nz*sizeof(PetscInt)+bs2*nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 569ec4f40fdSPierre Jolivet col = row + bs2*nz; 570ec4f40fdSPierre Jolivet val = (PetscScalar*)(col + bs2*nz); 571185f6596SHong Zhang 572397b6df1SKris Buschelman *r = row; *c = col; *v = val; 573397b6df1SKris Buschelman } else { 574397b6df1SKris Buschelman row = *r; col = *c; val = *v; 575397b6df1SKris Buschelman } 576397b6df1SKris Buschelman 577028e57e8SHong Zhang jj = 0; irow = rstart; 578ec4f40fdSPierre Jolivet for (i=0; i<mbs; i++) { 579397b6df1SKris Buschelman ajj = aj + ai[i]; /* ptr to the beginning of this row */ 580397b6df1SKris Buschelman countA = ai[i+1] - ai[i]; 581397b6df1SKris Buschelman countB = bi[i+1] - bi[i]; 582397b6df1SKris Buschelman bjj = bj + bi[i]; 583ec4f40fdSPierre Jolivet v1 = av + ai[i]*bs2; 584ec4f40fdSPierre Jolivet v2 = bv + bi[i]*bs2; 585397b6df1SKris Buschelman 586ec4f40fdSPierre Jolivet if (bs>1) { 587ec4f40fdSPierre Jolivet /* A-part */ 588ec4f40fdSPierre Jolivet for (j=0; j<countA; j++) { 589ec4f40fdSPierre Jolivet for (k=0; k<bs; k++) { 590ec4f40fdSPierre Jolivet for (m=0; m<bs; m++) { 591ec4f40fdSPierre Jolivet if (rstart + ajj[j]*bs>irow || k>=m) { 592ec4f40fdSPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) { 593ec4f40fdSPierre Jolivet row[jj] = irow + m + shift; col[jj] = rstart + ajj[j]*bs + k + shift; 594ec4f40fdSPierre Jolivet } 595ec4f40fdSPierre Jolivet val[jj++] = v1[j*bs2 + m + k*bs]; 596ec4f40fdSPierre Jolivet } 597ec4f40fdSPierre Jolivet } 598ec4f40fdSPierre Jolivet } 599ec4f40fdSPierre Jolivet } 600ec4f40fdSPierre Jolivet 601ec4f40fdSPierre Jolivet /* B-part */ 602ec4f40fdSPierre Jolivet for (j=0; j < countB; j++) { 603ec4f40fdSPierre Jolivet for (k=0; k<bs; k++) { 604ec4f40fdSPierre Jolivet for (m=0; m<bs; m++) { 605ec4f40fdSPierre Jolivet if (reuse == MAT_INITIAL_MATRIX) { 606ec4f40fdSPierre Jolivet row[jj] = irow + m + shift; col[jj] = garray[bjj[j]]*bs + k + shift; 607ec4f40fdSPierre Jolivet } 608ec4f40fdSPierre Jolivet val[jj++] = v2[j*bs2 + m + k*bs]; 609ec4f40fdSPierre Jolivet } 610ec4f40fdSPierre Jolivet } 611ec4f40fdSPierre Jolivet } 612ec4f40fdSPierre Jolivet } else { 613397b6df1SKris Buschelman /* A-part */ 614397b6df1SKris Buschelman for (j=0; j<countA; j++) { 615bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 616397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 617397b6df1SKris Buschelman } 61816ebf90aSShri Abhyankar val[jj++] = v1[j]; 619397b6df1SKris Buschelman } 62016ebf90aSShri Abhyankar 62116ebf90aSShri Abhyankar /* B-part */ 62216ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 623bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 624397b6df1SKris Buschelman row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 625397b6df1SKris Buschelman } 62616ebf90aSShri Abhyankar val[jj++] = v2[j]; 62716ebf90aSShri Abhyankar } 62816ebf90aSShri Abhyankar } 629ec4f40fdSPierre Jolivet irow+=bs; 630ec4f40fdSPierre Jolivet } 631ec4f40fdSPierre Jolivet *nnz = jj; 63216ebf90aSShri Abhyankar PetscFunctionReturn(0); 63316ebf90aSShri Abhyankar } 63416ebf90aSShri Abhyankar 635bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 63616ebf90aSShri Abhyankar { 63716ebf90aSShri Abhyankar const PetscInt *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 63816ebf90aSShri Abhyankar PetscErrorCode ierr; 63916ebf90aSShri Abhyankar PetscInt rstart,nz,i,j,jj,irow,countA,countB; 64016ebf90aSShri Abhyankar PetscInt *row,*col; 64116ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 64216ebf90aSShri Abhyankar PetscScalar *val; 643a3d589ffSStefano Zampini Mat Ad,Ao; 644a3d589ffSStefano Zampini Mat_SeqAIJ *aa; 645a3d589ffSStefano Zampini Mat_SeqAIJ *bb; 64616ebf90aSShri Abhyankar 64716ebf90aSShri Abhyankar PetscFunctionBegin; 648a3d589ffSStefano Zampini ierr = MatMPIAIJGetSeqAIJ(A,&Ad,&Ao,&garray);CHKERRQ(ierr); 649a3d589ffSStefano Zampini ierr = MatSeqAIJGetArrayRead(Ad,&av);CHKERRQ(ierr); 650a3d589ffSStefano Zampini ierr = MatSeqAIJGetArrayRead(Ao,&bv);CHKERRQ(ierr); 651a3d589ffSStefano Zampini 652a3d589ffSStefano Zampini aa = (Mat_SeqAIJ*)(Ad)->data; 653a3d589ffSStefano Zampini bb = (Mat_SeqAIJ*)(Ao)->data; 65438548759SBarry Smith ai = aa->i; 65538548759SBarry Smith aj = aa->j; 65638548759SBarry Smith bi = bb->i; 65738548759SBarry Smith bj = bb->j; 65816ebf90aSShri Abhyankar 659a3d589ffSStefano Zampini rstart = A->rmap->rstart; 6602205254eSKarl Rupp 661bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 66216ebf90aSShri Abhyankar nz = aa->nz + bb->nz; 66316ebf90aSShri Abhyankar *nnz = nz; 664185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 665185f6596SHong Zhang col = row + nz; 666185f6596SHong Zhang val = (PetscScalar*)(col + nz); 667185f6596SHong Zhang 66816ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 66916ebf90aSShri Abhyankar } else { 67016ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 67116ebf90aSShri Abhyankar } 67216ebf90aSShri Abhyankar 67316ebf90aSShri Abhyankar jj = 0; irow = rstart; 67416ebf90aSShri Abhyankar for (i=0; i<m; i++) { 67516ebf90aSShri Abhyankar ajj = aj + ai[i]; /* ptr to the beginning of this row */ 67616ebf90aSShri Abhyankar countA = ai[i+1] - ai[i]; 67716ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 67816ebf90aSShri Abhyankar bjj = bj + bi[i]; 67916ebf90aSShri Abhyankar v1 = av + ai[i]; 68016ebf90aSShri Abhyankar v2 = bv + bi[i]; 68116ebf90aSShri Abhyankar 68216ebf90aSShri Abhyankar /* A-part */ 68316ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 684bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 68516ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 68616ebf90aSShri Abhyankar } 68716ebf90aSShri Abhyankar val[jj++] = v1[j]; 68816ebf90aSShri Abhyankar } 68916ebf90aSShri Abhyankar 69016ebf90aSShri Abhyankar /* B-part */ 69116ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 692bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 69316ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 69416ebf90aSShri Abhyankar } 69516ebf90aSShri Abhyankar val[jj++] = v2[j]; 69616ebf90aSShri Abhyankar } 69716ebf90aSShri Abhyankar irow++; 69816ebf90aSShri Abhyankar } 699a3d589ffSStefano Zampini ierr = MatSeqAIJRestoreArrayRead(Ad,&av);CHKERRQ(ierr); 700a3d589ffSStefano Zampini ierr = MatSeqAIJRestoreArrayRead(Ao,&bv);CHKERRQ(ierr); 70116ebf90aSShri Abhyankar PetscFunctionReturn(0); 70216ebf90aSShri Abhyankar } 70316ebf90aSShri Abhyankar 704bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpibaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 70567877ebaSShri Abhyankar { 70667877ebaSShri Abhyankar Mat_MPIBAIJ *mat = (Mat_MPIBAIJ*)A->data; 70767877ebaSShri Abhyankar Mat_SeqBAIJ *aa = (Mat_SeqBAIJ*)(mat->A)->data; 70867877ebaSShri Abhyankar Mat_SeqBAIJ *bb = (Mat_SeqBAIJ*)(mat->B)->data; 70967877ebaSShri Abhyankar const PetscInt *ai = aa->i, *bi = bb->i, *aj = aa->j, *bj = bb->j,*ajj, *bjj; 710d985c460SShri Abhyankar const PetscInt *garray = mat->garray,mbs=mat->mbs,rstart=A->rmap->rstart; 71133d57670SJed Brown const PetscInt bs2=mat->bs2; 71267877ebaSShri Abhyankar PetscErrorCode ierr; 71333d57670SJed Brown PetscInt bs,nz,i,j,k,n,jj,irow,countA,countB,idx; 71467877ebaSShri Abhyankar PetscInt *row,*col; 71567877ebaSShri Abhyankar const PetscScalar *av=aa->a, *bv=bb->a,*v1,*v2; 71667877ebaSShri Abhyankar PetscScalar *val; 71767877ebaSShri Abhyankar 71867877ebaSShri Abhyankar PetscFunctionBegin; 71933d57670SJed Brown ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 720bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 72167877ebaSShri Abhyankar nz = bs2*(aa->nz + bb->nz); 72267877ebaSShri Abhyankar *nnz = nz; 723185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 724185f6596SHong Zhang col = row + nz; 725185f6596SHong Zhang val = (PetscScalar*)(col + nz); 726185f6596SHong Zhang 72767877ebaSShri Abhyankar *r = row; *c = col; *v = val; 72867877ebaSShri Abhyankar } else { 72967877ebaSShri Abhyankar row = *r; col = *c; val = *v; 73067877ebaSShri Abhyankar } 73167877ebaSShri Abhyankar 732d985c460SShri Abhyankar jj = 0; irow = rstart; 73367877ebaSShri Abhyankar for (i=0; i<mbs; i++) { 73467877ebaSShri Abhyankar countA = ai[i+1] - ai[i]; 73567877ebaSShri Abhyankar countB = bi[i+1] - bi[i]; 73667877ebaSShri Abhyankar ajj = aj + ai[i]; 73767877ebaSShri Abhyankar bjj = bj + bi[i]; 73867877ebaSShri Abhyankar v1 = av + bs2*ai[i]; 73967877ebaSShri Abhyankar v2 = bv + bs2*bi[i]; 74067877ebaSShri Abhyankar 74167877ebaSShri Abhyankar idx = 0; 74267877ebaSShri Abhyankar /* A-part */ 74367877ebaSShri Abhyankar for (k=0; k<countA; k++) { 74467877ebaSShri Abhyankar for (j=0; j<bs; j++) { 74567877ebaSShri Abhyankar for (n=0; n<bs; n++) { 746bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 747d985c460SShri Abhyankar row[jj] = irow + n + shift; 748d985c460SShri Abhyankar col[jj] = rstart + bs*ajj[k] + j + shift; 74967877ebaSShri Abhyankar } 75067877ebaSShri Abhyankar val[jj++] = v1[idx++]; 75167877ebaSShri Abhyankar } 75267877ebaSShri Abhyankar } 75367877ebaSShri Abhyankar } 75467877ebaSShri Abhyankar 75567877ebaSShri Abhyankar idx = 0; 75667877ebaSShri Abhyankar /* B-part */ 75767877ebaSShri Abhyankar for (k=0; k<countB; k++) { 75867877ebaSShri Abhyankar for (j=0; j<bs; j++) { 75967877ebaSShri Abhyankar for (n=0; n<bs; n++) { 760bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 761d985c460SShri Abhyankar row[jj] = irow + n + shift; 762d985c460SShri Abhyankar col[jj] = bs*garray[bjj[k]] + j + shift; 76367877ebaSShri Abhyankar } 764d985c460SShri Abhyankar val[jj++] = v2[idx++]; 76567877ebaSShri Abhyankar } 76667877ebaSShri Abhyankar } 76767877ebaSShri Abhyankar } 768d985c460SShri Abhyankar irow += bs; 76967877ebaSShri Abhyankar } 77067877ebaSShri Abhyankar PetscFunctionReturn(0); 77167877ebaSShri Abhyankar } 77267877ebaSShri Abhyankar 773bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v) 77416ebf90aSShri Abhyankar { 77516ebf90aSShri Abhyankar const PetscInt *ai, *aj,*adiag, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj; 77616ebf90aSShri Abhyankar PetscErrorCode ierr; 777e0bace9bSHong Zhang PetscInt rstart,nz,nza,nzb,i,j,jj,irow,countA,countB; 77816ebf90aSShri Abhyankar PetscInt *row,*col; 77916ebf90aSShri Abhyankar const PetscScalar *av, *bv,*v1,*v2; 78016ebf90aSShri Abhyankar PetscScalar *val; 781a3d589ffSStefano Zampini Mat Ad,Ao; 782a3d589ffSStefano Zampini Mat_SeqAIJ *aa; 783a3d589ffSStefano Zampini Mat_SeqAIJ *bb; 78438548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 78538548759SBarry Smith PetscBool hermitian; 78638548759SBarry Smith #endif 78716ebf90aSShri Abhyankar 78816ebf90aSShri Abhyankar PetscFunctionBegin; 78938548759SBarry Smith #if defined(PETSC_USE_COMPLEX) 79038548759SBarry Smith ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr); 79138548759SBarry Smith if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy"); 79238548759SBarry Smith #endif 793a3d589ffSStefano Zampini ierr = MatMPIAIJGetSeqAIJ(A,&Ad,&Ao,&garray);CHKERRQ(ierr); 794a3d589ffSStefano Zampini ierr = MatSeqAIJGetArrayRead(Ad,&av);CHKERRQ(ierr); 795a3d589ffSStefano Zampini ierr = MatSeqAIJGetArrayRead(Ao,&bv);CHKERRQ(ierr); 796a3d589ffSStefano Zampini 797a3d589ffSStefano Zampini aa = (Mat_SeqAIJ*)(Ad)->data; 798a3d589ffSStefano Zampini bb = (Mat_SeqAIJ*)(Ao)->data; 79938548759SBarry Smith ai = aa->i; 80038548759SBarry Smith aj = aa->j; 80138548759SBarry Smith adiag = aa->diag; 80238548759SBarry Smith bi = bb->i; 80338548759SBarry Smith bj = bb->j; 8042205254eSKarl Rupp 80516ebf90aSShri Abhyankar rstart = A->rmap->rstart; 80616ebf90aSShri Abhyankar 807bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 808e0bace9bSHong Zhang nza = 0; /* num of upper triangular entries in mat->A, including diagonals */ 809e0bace9bSHong Zhang nzb = 0; /* num of upper triangular entries in mat->B */ 81016ebf90aSShri Abhyankar for (i=0; i<m; i++) { 811e0bace9bSHong Zhang nza += (ai[i+1] - adiag[i]); 81216ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 81316ebf90aSShri Abhyankar bjj = bj + bi[i]; 814e0bace9bSHong Zhang for (j=0; j<countB; j++) { 815e0bace9bSHong Zhang if (garray[bjj[j]] > rstart) nzb++; 816e0bace9bSHong Zhang } 817e0bace9bSHong Zhang } 81816ebf90aSShri Abhyankar 819e0bace9bSHong Zhang nz = nza + nzb; /* total nz of upper triangular part of mat */ 82016ebf90aSShri Abhyankar *nnz = nz; 821185f6596SHong Zhang ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr); 822185f6596SHong Zhang col = row + nz; 823185f6596SHong Zhang val = (PetscScalar*)(col + nz); 824185f6596SHong Zhang 82516ebf90aSShri Abhyankar *r = row; *c = col; *v = val; 82616ebf90aSShri Abhyankar } else { 82716ebf90aSShri Abhyankar row = *r; col = *c; val = *v; 82816ebf90aSShri Abhyankar } 82916ebf90aSShri Abhyankar 83016ebf90aSShri Abhyankar jj = 0; irow = rstart; 83116ebf90aSShri Abhyankar for (i=0; i<m; i++) { 83216ebf90aSShri Abhyankar ajj = aj + adiag[i]; /* ptr to the beginning of the diagonal of this row */ 83316ebf90aSShri Abhyankar v1 = av + adiag[i]; 83416ebf90aSShri Abhyankar countA = ai[i+1] - adiag[i]; 83516ebf90aSShri Abhyankar countB = bi[i+1] - bi[i]; 83616ebf90aSShri Abhyankar bjj = bj + bi[i]; 83716ebf90aSShri Abhyankar v2 = bv + bi[i]; 83816ebf90aSShri Abhyankar 83916ebf90aSShri Abhyankar /* A-part */ 84016ebf90aSShri Abhyankar for (j=0; j<countA; j++) { 841bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 84216ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift; 84316ebf90aSShri Abhyankar } 84416ebf90aSShri Abhyankar val[jj++] = v1[j]; 84516ebf90aSShri Abhyankar } 84616ebf90aSShri Abhyankar 84716ebf90aSShri Abhyankar /* B-part */ 84816ebf90aSShri Abhyankar for (j=0; j < countB; j++) { 84916ebf90aSShri Abhyankar if (garray[bjj[j]] > rstart) { 850bccb9932SShri Abhyankar if (reuse == MAT_INITIAL_MATRIX) { 85116ebf90aSShri Abhyankar row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift; 85216ebf90aSShri Abhyankar } 85316ebf90aSShri Abhyankar val[jj++] = v2[j]; 85416ebf90aSShri Abhyankar } 855397b6df1SKris Buschelman } 856397b6df1SKris Buschelman irow++; 857397b6df1SKris Buschelman } 858a3d589ffSStefano Zampini ierr = MatSeqAIJRestoreArrayRead(Ad,&av);CHKERRQ(ierr); 859a3d589ffSStefano Zampini ierr = MatSeqAIJRestoreArrayRead(Ao,&bv);CHKERRQ(ierr); 860397b6df1SKris Buschelman PetscFunctionReturn(0); 861397b6df1SKris Buschelman } 862397b6df1SKris Buschelman 863dfbe8321SBarry Smith PetscErrorCode MatDestroy_MUMPS(Mat A) 864dfbe8321SBarry Smith { 865e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 866dfbe8321SBarry Smith PetscErrorCode ierr; 867b24902e0SBarry Smith 868397b6df1SKris Buschelman PetscFunctionBegin; 869a5e57a09SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 870a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_rhs);CHKERRQ(ierr); 871a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 872801fbe65SHong Zhang ierr = VecDestroy(&mumps->b_seq);CHKERRQ(ierr); 873a5e57a09SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 874a5e57a09SHong Zhang ierr = PetscFree(mumps->id.perm_in);CHKERRQ(ierr); 875a5e57a09SHong Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); 876b34f08ffSHong Zhang ierr = PetscFree(mumps->info);CHKERRQ(ierr); 87759ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 878a5e57a09SHong Zhang mumps->id.job = JOB_END; 8793ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 8806c62bb2dSHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in MatDestroy_MUMPS: INFOG(1)=%d\n",mumps->id.INFOG(1)); 8813ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 8823ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { ierr = PetscOmpCtrlDestroy(&mumps->omp_ctrl);CHKERRQ(ierr); } 8833ab56b82SJunchao Zhang #endif 8843ab56b82SJunchao Zhang ierr = PetscFree2(mumps->recvcount,mumps->displs);CHKERRQ(ierr); 885e69c285eSBarry Smith ierr = PetscFree(A->data);CHKERRQ(ierr); 886bf0cc555SLisandro Dalcin 88797969023SHong Zhang /* clear composed functions */ 8883ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 8895a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr); 8905a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr); 891bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetIcntl_C",NULL);CHKERRQ(ierr); 892bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetIcntl_C",NULL);CHKERRQ(ierr); 893bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetCntl_C",NULL);CHKERRQ(ierr); 894bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetCntl_C",NULL);CHKERRQ(ierr); 895ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfo_C",NULL);CHKERRQ(ierr); 896ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfog_C",NULL);CHKERRQ(ierr); 897ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfo_C",NULL);CHKERRQ(ierr); 898ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfog_C",NULL);CHKERRQ(ierr); 89989a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverse_C",NULL);CHKERRQ(ierr); 9000e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverseTranspose_C",NULL);CHKERRQ(ierr); 901397b6df1SKris Buschelman PetscFunctionReturn(0); 902397b6df1SKris Buschelman } 903397b6df1SKris Buschelman 904b24902e0SBarry Smith PetscErrorCode MatSolve_MUMPS(Mat A,Vec b,Vec x) 905b24902e0SBarry Smith { 906e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 907d54de34fSKris Buschelman PetscScalar *array; 90867877ebaSShri Abhyankar Vec b_seq; 909329ec9b3SHong Zhang IS is_iden,is_petsc; 910dfbe8321SBarry Smith PetscErrorCode ierr; 911329ec9b3SHong Zhang PetscInt i; 912cc86f929SStefano Zampini PetscBool second_solve = PETSC_FALSE; 913883f2eb9SBarry Smith static PetscBool cite1 = PETSC_FALSE,cite2 = PETSC_FALSE; 914397b6df1SKris Buschelman 915397b6df1SKris Buschelman PetscFunctionBegin; 916883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS01,\n author = {P.~R. Amestoy and I.~S. Duff and J.-Y. L'Excellent and J. Koster},\n title = {A fully asynchronous multifrontal solver using distributed dynamic scheduling},\n journal = {SIAM Journal on Matrix Analysis and Applications},\n volume = {23},\n number = {1},\n pages = {15--41},\n year = {2001}\n}\n",&cite1);CHKERRQ(ierr); 917883f2eb9SBarry Smith ierr = PetscCitationsRegister("@article{MUMPS02,\n author = {P.~R. Amestoy and A. Guermouche and J.-Y. L'Excellent and S. Pralet},\n title = {Hybrid scheduling for the parallel solution of linear systems},\n journal = {Parallel Computing},\n volume = {32},\n number = {2},\n pages = {136--156},\n year = {2006}\n}\n",&cite2);CHKERRQ(ierr); 9182aca8efcSHong Zhang 919603e8f96SBarry Smith if (A->factorerrortype) { 9202aca8efcSHong Zhang ierr = PetscInfo2(A,"MatSolve is called with singular matrix factor, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 9212aca8efcSHong Zhang ierr = VecSetInf(x);CHKERRQ(ierr); 9222aca8efcSHong Zhang PetscFunctionReturn(0); 9232aca8efcSHong Zhang } 9242aca8efcSHong Zhang 925be818407SHong Zhang mumps->id.ICNTL(20) = 0; /* dense RHS */ 926a5e57a09SHong Zhang mumps->id.nrhs = 1; 927a5e57a09SHong Zhang b_seq = mumps->b_seq; 9282d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 929329ec9b3SHong Zhang /* MUMPS only supports centralized rhs. Scatter b into a seqential rhs vector */ 930a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 931a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 932a5e57a09SHong Zhang if (!mumps->myid) {ierr = VecGetArray(b_seq,&array);CHKERRQ(ierr);} 9333ab56b82SJunchao Zhang } else { /* petsc_size == 1 */ 934397b6df1SKris Buschelman ierr = VecCopy(b,x);CHKERRQ(ierr); 935397b6df1SKris Buschelman ierr = VecGetArray(x,&array);CHKERRQ(ierr); 936397b6df1SKris Buschelman } 937a5e57a09SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 938a5e57a09SHong Zhang mumps->id.nrhs = 1; 939940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)array; 940397b6df1SKris Buschelman } 941397b6df1SKris Buschelman 942cc86f929SStefano Zampini /* 943cc86f929SStefano Zampini handle condensation step of Schur complement (if any) 944cc86f929SStefano Zampini We set by default ICNTL(26) == -1 when Schur indices have been provided by the user. 945cc86f929SStefano Zampini According to MUMPS (5.0.0) manual, any value should be harmful during the factorization phase 946cc86f929SStefano Zampini Unless the user provides a valid value for ICNTL(26), MatSolve and MatMatSolve routines solve the full system. 947cc86f929SStefano Zampini This requires an extra call to PetscMUMPS_c and the computation of the factors for S 948cc86f929SStefano Zampini */ 949583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 9502d4298aeSJunchao Zhang if (mumps->petsc_size > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 951cc86f929SStefano Zampini second_solve = PETSC_TRUE; 952b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 953cc86f929SStefano Zampini } 954397b6df1SKris Buschelman /* solve phase */ 955329ec9b3SHong Zhang /*-------------*/ 956a5e57a09SHong Zhang mumps->id.job = JOB_SOLVE; 9573ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 958a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 959397b6df1SKris Buschelman 960b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 961cc86f929SStefano Zampini if (second_solve) { 962b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 963cc86f929SStefano Zampini } 964b5fa320bSStefano Zampini 9652d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { /* convert mumps distributed solution to petsc mpi x */ 966a5e57a09SHong Zhang if (mumps->scat_sol && mumps->ICNTL9_pre != mumps->id.ICNTL(9)) { 967a5e57a09SHong Zhang /* when id.ICNTL(9) changes, the contents of lsol_loc may change (not its size, lsol_loc), recreates scat_sol */ 968a5e57a09SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 969397b6df1SKris Buschelman } 970a5e57a09SHong Zhang if (!mumps->scat_sol) { /* create scatter scat_sol */ 971a5e57a09SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,mumps->id.lsol_loc,0,1,&is_iden);CHKERRQ(ierr); /* from */ 972a5e57a09SHong Zhang for (i=0; i<mumps->id.lsol_loc; i++) { 973a5e57a09SHong Zhang mumps->id.isol_loc[i] -= 1; /* change Fortran style to C style */ 974a5e57a09SHong Zhang } 975a5e57a09SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,mumps->id.lsol_loc,mumps->id.isol_loc,PETSC_COPY_VALUES,&is_petsc);CHKERRQ(ierr); /* to */ 9769448b7f1SJunchao Zhang ierr = VecScatterCreate(mumps->x_seq,is_iden,x,is_petsc,&mumps->scat_sol);CHKERRQ(ierr); 9776bf464f9SBarry Smith ierr = ISDestroy(&is_iden);CHKERRQ(ierr); 9786bf464f9SBarry Smith ierr = ISDestroy(&is_petsc);CHKERRQ(ierr); 9792205254eSKarl Rupp 980a5e57a09SHong Zhang mumps->ICNTL9_pre = mumps->id.ICNTL(9); /* save current value of id.ICNTL(9) */ 981397b6df1SKris Buschelman } 982a5e57a09SHong Zhang 983a5e57a09SHong Zhang ierr = VecScatterBegin(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 984a5e57a09SHong Zhang ierr = VecScatterEnd(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 985329ec9b3SHong Zhang } 986353d7d71SJunchao Zhang 987353d7d71SJunchao Zhang if (mumps->petsc_size > 1) {if (!mumps->myid) {ierr = VecRestoreArray(b_seq,&array);CHKERRQ(ierr);}} 988353d7d71SJunchao Zhang else {ierr = VecRestoreArray(x,&array);CHKERRQ(ierr);} 989353d7d71SJunchao Zhang 9909880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*mumps->id.RINFO(3));CHKERRQ(ierr); 991397b6df1SKris Buschelman PetscFunctionReturn(0); 992397b6df1SKris Buschelman } 993397b6df1SKris Buschelman 99451d5961aSHong Zhang PetscErrorCode MatSolveTranspose_MUMPS(Mat A,Vec b,Vec x) 99551d5961aSHong Zhang { 996e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 99751d5961aSHong Zhang PetscErrorCode ierr; 99851d5961aSHong Zhang 99951d5961aSHong Zhang PetscFunctionBegin; 1000a5e57a09SHong Zhang mumps->id.ICNTL(9) = 0; 10010ad0caddSJed Brown ierr = MatSolve_MUMPS(A,b,x);CHKERRQ(ierr); 1002a5e57a09SHong Zhang mumps->id.ICNTL(9) = 1; 100351d5961aSHong Zhang PetscFunctionReturn(0); 100451d5961aSHong Zhang } 100551d5961aSHong Zhang 1006e0b74bf9SHong Zhang PetscErrorCode MatMatSolve_MUMPS(Mat A,Mat B,Mat X) 1007e0b74bf9SHong Zhang { 1008bda8bf91SBarry Smith PetscErrorCode ierr; 1009b8491c3eSStefano Zampini Mat Bt = NULL; 1010b8491c3eSStefano Zampini PetscBool flg, flgT; 1011e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 1012334c5f61SHong Zhang PetscInt i,nrhs,M; 10131683a169SBarry Smith PetscScalar *array; 10141683a169SBarry Smith const PetscScalar *rbray; 10155b7de3c2SKarl Rupp PetscInt lsol_loc,nlsol_loc,*isol_loc,*idxx,*isol_loc_save,iidx = 0; 10161683a169SBarry Smith PetscScalar *bray,*sol_loc,*sol_loc_save; 1017be818407SHong Zhang IS is_to,is_from; 1018beae5ec0SHong Zhang PetscInt k,proc,j,m,myrstart; 1019be818407SHong Zhang const PetscInt *rstart; 1020beae5ec0SHong Zhang Vec v_mpi,b_seq,msol_loc; 1021be818407SHong Zhang VecScatter scat_rhs,scat_sol; 1022be818407SHong Zhang PetscScalar *aa; 1023be818407SHong Zhang PetscInt spnr,*ia,*ja; 1024d56c302dSHong Zhang Mat_MPIAIJ *b = NULL; 1025bda8bf91SBarry Smith 1026e0b74bf9SHong Zhang PetscFunctionBegin; 1027be818407SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)X,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 1028be818407SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_ARG_WRONG,"Matrix X must be MATDENSE matrix"); 1029be818407SHong Zhang 10300298fd71SBarry Smith ierr = PetscObjectTypeCompareAny((PetscObject)B,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr); 1031be818407SHong Zhang if (flg) { /* dense B */ 1032c0be3364SHong Zhang if (B->rmap->n != X->rmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Matrix B and X must have same row distribution"); 1033be818407SHong Zhang mumps->id.ICNTL(20)= 0; /* dense RHS */ 10340e6b8875SHong Zhang } else { /* sparse B */ 1035be818407SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)B,MATTRANSPOSEMAT,&flgT);CHKERRQ(ierr); 10360e6b8875SHong Zhang if (flgT) { /* input B is transpose of actural RHS matrix, 10370e6b8875SHong Zhang because mumps requires sparse compressed COLUMN storage! See MatMatTransposeSolve_MUMPS() */ 1038be818407SHong Zhang ierr = MatTransposeGetMat(B,&Bt);CHKERRQ(ierr); 10390f52d626SJunchao Zhang } else SETERRQ(PetscObjectComm((PetscObject)B),PETSC_ERR_ARG_WRONG,"Matrix B must be MATTRANSPOSEMAT matrix"); 1040be818407SHong Zhang mumps->id.ICNTL(20)= 1; /* sparse RHS */ 1041b8491c3eSStefano Zampini } 104287b22cf4SHong Zhang 10439481e6e9SHong Zhang ierr = MatGetSize(B,&M,&nrhs);CHKERRQ(ierr); 10449481e6e9SHong Zhang mumps->id.nrhs = nrhs; 10459481e6e9SHong Zhang mumps->id.lrhs = M; 10462b691707SHong Zhang mumps->id.rhs = NULL; 10479481e6e9SHong Zhang 10482d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 1049b8491c3eSStefano Zampini PetscScalar *aa; 1050b8491c3eSStefano Zampini PetscInt spnr,*ia,*ja; 1051e94cce23SStefano Zampini PetscBool second_solve = PETSC_FALSE; 1052b8491c3eSStefano Zampini 10532cd7d884SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 1054b8491c3eSStefano Zampini mumps->id.rhs = (MumpsScalar*)array; 10552b691707SHong Zhang 10562b691707SHong Zhang if (!Bt) { /* dense B */ 10572b691707SHong Zhang /* copy B to X */ 10581683a169SBarry Smith ierr = MatDenseGetArrayRead(B,&rbray);CHKERRQ(ierr); 1059580bdb30SBarry Smith ierr = PetscArraycpy(array,rbray,M*nrhs);CHKERRQ(ierr); 10601683a169SBarry Smith ierr = MatDenseRestoreArrayRead(B,&rbray);CHKERRQ(ierr); 10612b691707SHong Zhang } else { /* sparse B */ 1062b8491c3eSStefano Zampini ierr = MatSeqAIJGetArray(Bt,&aa);CHKERRQ(ierr); 1063be818407SHong Zhang ierr = MatGetRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1064c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 10652b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 1066b8491c3eSStefano Zampini mumps->id.irhs_ptr = ia; 1067b8491c3eSStefano Zampini mumps->id.irhs_sparse = ja; 1068b8491c3eSStefano Zampini mumps->id.nz_rhs = ia[spnr] - 1; 1069b8491c3eSStefano Zampini mumps->id.rhs_sparse = (MumpsScalar*)aa; 1070b8491c3eSStefano Zampini } 1071e94cce23SStefano Zampini /* handle condensation step of Schur complement (if any) */ 1072583f777eSStefano Zampini if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) { 1073e94cce23SStefano Zampini second_solve = PETSC_TRUE; 1074b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr); 1075e94cce23SStefano Zampini } 10762cd7d884SHong Zhang /* solve phase */ 10772cd7d884SHong Zhang /*-------------*/ 10782cd7d884SHong Zhang mumps->id.job = JOB_SOLVE; 10793ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 10802cd7d884SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 1081b5fa320bSStefano Zampini 1082b5fa320bSStefano Zampini /* handle expansion step of Schur complement (if any) */ 1083e94cce23SStefano Zampini if (second_solve) { 1084b3cb21ddSStefano Zampini ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr); 1085e94cce23SStefano Zampini } 10862b691707SHong Zhang if (Bt) { /* sparse B */ 1087b8491c3eSStefano Zampini ierr = MatSeqAIJRestoreArray(Bt,&aa);CHKERRQ(ierr); 1088be818407SHong Zhang ierr = MatRestoreRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1089c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 1090b8491c3eSStefano Zampini } 10912cd7d884SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 1092be818407SHong Zhang PetscFunctionReturn(0); 1093be818407SHong Zhang } 1094801fbe65SHong Zhang 1095be818407SHong Zhang /*--------- parallel case: MUMPS requires rhs B to be centralized on the host! --------*/ 10962d4298aeSJunchao Zhang if (mumps->petsc_size > 1 && mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n"); 1097241dbb5eSStefano Zampini 1098beae5ec0SHong Zhang /* create msol_loc to hold mumps local solution */ 10991683a169SBarry Smith isol_loc_save = mumps->id.isol_loc; /* save it for MatSolve() */ 11001683a169SBarry Smith sol_loc_save = (PetscScalar*)mumps->id.sol_loc; 1101801fbe65SHong Zhang 1102a1dfcbd9SJunchao Zhang lsol_loc = mumps->id.lsol_loc; 110371aed81dSHong Zhang nlsol_loc = nrhs*lsol_loc; /* length of sol_loc */ 1104a1dfcbd9SJunchao Zhang ierr = PetscMalloc2(nlsol_loc,&sol_loc,lsol_loc,&isol_loc);CHKERRQ(ierr); 1105940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1106801fbe65SHong Zhang mumps->id.isol_loc = isol_loc; 1107801fbe65SHong Zhang 1108beae5ec0SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,nlsol_loc,(PetscScalar*)sol_loc,&msol_loc);CHKERRQ(ierr); 11092cd7d884SHong Zhang 11102b691707SHong Zhang if (!Bt) { /* dense B */ 111180577c12SJunchao Zhang /* TODO: Because of non-contiguous indices, the created vecscatter scat_rhs is not done in MPI_Gather, resulting in 111280577c12SJunchao Zhang very inefficient communication. An optimization is to use VecScatterCreateToZero to gather B to rank 0. Then on rank 111380577c12SJunchao Zhang 0, re-arrange B into desired order, which is a local operation. 111480577c12SJunchao Zhang */ 111580577c12SJunchao Zhang 1116beae5ec0SHong Zhang /* scatter v_mpi to b_seq because MUMPS only supports centralized rhs */ 1117be818407SHong Zhang /* wrap dense rhs matrix B into a vector v_mpi */ 11182b691707SHong Zhang ierr = MatGetLocalSize(B,&m,NULL);CHKERRQ(ierr); 11192b691707SHong Zhang ierr = MatDenseGetArray(B,&bray);CHKERRQ(ierr); 11202b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)B),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 11212b691707SHong Zhang ierr = MatDenseRestoreArray(B,&bray);CHKERRQ(ierr); 11222b691707SHong Zhang 1123be818407SHong Zhang /* scatter v_mpi to b_seq in proc[0]. MUMPS requires rhs to be centralized on the host! */ 1124801fbe65SHong Zhang if (!mumps->myid) { 1125beae5ec0SHong Zhang PetscInt *idx; 1126beae5ec0SHong Zhang /* idx: maps from k-th index of v_mpi to (i,j)-th global entry of B */ 1127beae5ec0SHong Zhang ierr = PetscMalloc1(nrhs*M,&idx);CHKERRQ(ierr); 1128be818407SHong Zhang ierr = MatGetOwnershipRanges(B,&rstart);CHKERRQ(ierr); 1129be818407SHong Zhang k = 0; 11302d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1131be818407SHong Zhang for (j=0; j<nrhs; j++){ 1132beae5ec0SHong Zhang for (i=rstart[proc]; i<rstart[proc+1]; i++) idx[k++] = j*M + i; 1133be818407SHong Zhang } 1134be818407SHong Zhang } 1135be818407SHong Zhang 1136334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,nrhs*M,&b_seq);CHKERRQ(ierr); 1137beae5ec0SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nrhs*M,idx,PETSC_OWN_POINTER,&is_to);CHKERRQ(ierr); 1138801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nrhs*M,0,1,&is_from);CHKERRQ(ierr); 1139801fbe65SHong Zhang } else { 1140334c5f61SHong Zhang ierr = VecCreateSeq(PETSC_COMM_SELF,0,&b_seq);CHKERRQ(ierr); 1141801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_to);CHKERRQ(ierr); 1142801fbe65SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_from);CHKERRQ(ierr); 1143801fbe65SHong Zhang } 11449448b7f1SJunchao Zhang ierr = VecScatterCreate(v_mpi,is_from,b_seq,is_to,&scat_rhs);CHKERRQ(ierr); 1145334c5f61SHong Zhang ierr = VecScatterBegin(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1146801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1147801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1148334c5f61SHong Zhang ierr = VecScatterEnd(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1149801fbe65SHong Zhang 1150801fbe65SHong Zhang if (!mumps->myid) { /* define rhs on the host */ 1151334c5f61SHong Zhang ierr = VecGetArray(b_seq,&bray);CHKERRQ(ierr); 1152940cd9d6SSatish Balay mumps->id.rhs = (MumpsScalar*)bray; 1153334c5f61SHong Zhang ierr = VecRestoreArray(b_seq,&bray);CHKERRQ(ierr); 1154801fbe65SHong Zhang } 1155801fbe65SHong Zhang 11562b691707SHong Zhang } else { /* sparse B */ 11572b691707SHong Zhang b = (Mat_MPIAIJ*)Bt->data; 11582b691707SHong Zhang 1159be818407SHong Zhang /* wrap dense X into a vector v_mpi */ 11602b691707SHong Zhang ierr = MatGetLocalSize(X,&m,NULL);CHKERRQ(ierr); 11612b691707SHong Zhang ierr = MatDenseGetArray(X,&bray);CHKERRQ(ierr); 11622b691707SHong Zhang ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)X),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr); 11632b691707SHong Zhang ierr = MatDenseRestoreArray(X,&bray);CHKERRQ(ierr); 11642b691707SHong Zhang 11652b691707SHong Zhang if (!mumps->myid) { 11662b691707SHong Zhang ierr = MatSeqAIJGetArray(b->A,&aa);CHKERRQ(ierr); 1167be818407SHong Zhang ierr = MatGetRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1168c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 11692b691707SHong Zhang /* mumps requires ia and ja start at 1! */ 11702b691707SHong Zhang mumps->id.irhs_ptr = ia; 11712b691707SHong Zhang mumps->id.irhs_sparse = ja; 11722b691707SHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 11732b691707SHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 11742b691707SHong Zhang } else { 11752b691707SHong Zhang mumps->id.irhs_ptr = NULL; 11762b691707SHong Zhang mumps->id.irhs_sparse = NULL; 11772b691707SHong Zhang mumps->id.nz_rhs = 0; 11782b691707SHong Zhang mumps->id.rhs_sparse = NULL; 11792b691707SHong Zhang } 11802b691707SHong Zhang } 11812b691707SHong Zhang 1182801fbe65SHong Zhang /* solve phase */ 1183801fbe65SHong Zhang /*-------------*/ 1184801fbe65SHong Zhang mumps->id.job = JOB_SOLVE; 11853ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1186801fbe65SHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 1187801fbe65SHong Zhang 1188334c5f61SHong Zhang /* scatter mumps distributed solution to petsc vector v_mpi, which shares local arrays with solution matrix X */ 118974f0fcc7SHong Zhang ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr); 119074f0fcc7SHong Zhang ierr = VecPlaceArray(v_mpi,array);CHKERRQ(ierr); 1191801fbe65SHong Zhang 1192334c5f61SHong Zhang /* create scatter scat_sol */ 1193be818407SHong Zhang ierr = MatGetOwnershipRanges(X,&rstart);CHKERRQ(ierr); 1194beae5ec0SHong Zhang /* iidx: index for scatter mumps solution to petsc X */ 1195beae5ec0SHong Zhang 1196beae5ec0SHong Zhang ierr = ISCreateStride(PETSC_COMM_SELF,nlsol_loc,0,1,&is_from);CHKERRQ(ierr); 1197beae5ec0SHong Zhang ierr = PetscMalloc1(nlsol_loc,&idxx);CHKERRQ(ierr); 1198beae5ec0SHong Zhang for (i=0; i<lsol_loc; i++) { 1199beae5ec0SHong Zhang isol_loc[i] -= 1; /* change Fortran style to C style. isol_loc[i+j*lsol_loc] contains x[isol_loc[i]] in j-th vector */ 1200beae5ec0SHong Zhang 12012d4298aeSJunchao Zhang for (proc=0; proc<mumps->petsc_size; proc++){ 1202beae5ec0SHong Zhang if (isol_loc[i] >= rstart[proc] && isol_loc[i] < rstart[proc+1]) { 1203beae5ec0SHong Zhang myrstart = rstart[proc]; 1204beae5ec0SHong Zhang k = isol_loc[i] - myrstart; /* local index on 1st column of petsc vector X */ 1205beae5ec0SHong Zhang iidx = k + myrstart*nrhs; /* maps mumps isol_loc[i] to petsc index in X */ 1206beae5ec0SHong Zhang m = rstart[proc+1] - rstart[proc]; /* rows of X for this proc */ 1207beae5ec0SHong Zhang break; 1208be818407SHong Zhang } 1209be818407SHong Zhang } 1210be818407SHong Zhang 1211beae5ec0SHong Zhang for (j=0; j<nrhs; j++) idxx[i+j*lsol_loc] = iidx + j*m; 1212801fbe65SHong Zhang } 1213be818407SHong Zhang ierr = ISCreateGeneral(PETSC_COMM_SELF,nlsol_loc,idxx,PETSC_COPY_VALUES,&is_to);CHKERRQ(ierr); 1214beae5ec0SHong Zhang ierr = VecScatterCreate(msol_loc,is_from,v_mpi,is_to,&scat_sol);CHKERRQ(ierr); 1215beae5ec0SHong Zhang ierr = VecScatterBegin(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1216801fbe65SHong Zhang ierr = ISDestroy(&is_from);CHKERRQ(ierr); 1217801fbe65SHong Zhang ierr = ISDestroy(&is_to);CHKERRQ(ierr); 1218beae5ec0SHong Zhang ierr = VecScatterEnd(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr); 1219801fbe65SHong Zhang ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr); 122071aed81dSHong Zhang 122171aed81dSHong Zhang /* free spaces */ 12221683a169SBarry Smith mumps->id.sol_loc = (MumpsScalar*)sol_loc_save; 122371aed81dSHong Zhang mumps->id.isol_loc = isol_loc_save; 122471aed81dSHong Zhang 122571aed81dSHong Zhang ierr = PetscFree2(sol_loc,isol_loc);CHKERRQ(ierr); 1226801fbe65SHong Zhang ierr = PetscFree(idxx);CHKERRQ(ierr); 1227beae5ec0SHong Zhang ierr = VecDestroy(&msol_loc);CHKERRQ(ierr); 122874f0fcc7SHong Zhang ierr = VecDestroy(&v_mpi);CHKERRQ(ierr); 12292b691707SHong Zhang if (Bt) { 12302b691707SHong Zhang if (!mumps->myid) { 1231d56c302dSHong Zhang b = (Mat_MPIAIJ*)Bt->data; 12322b691707SHong Zhang ierr = MatSeqAIJRestoreArray(b->A,&aa);CHKERRQ(ierr); 1233be818407SHong Zhang ierr = MatRestoreRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 1234c0be3364SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure"); 12352b691707SHong Zhang } 12362b691707SHong Zhang } else { 1237334c5f61SHong Zhang ierr = VecDestroy(&b_seq);CHKERRQ(ierr); 1238334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_rhs);CHKERRQ(ierr); 12392b691707SHong Zhang } 1240334c5f61SHong Zhang ierr = VecScatterDestroy(&scat_sol);CHKERRQ(ierr); 12419880c9b4SStefano Zampini ierr = PetscLogFlops(2.0*nrhs*mumps->id.RINFO(3));CHKERRQ(ierr); 1242e0b74bf9SHong Zhang PetscFunctionReturn(0); 1243e0b74bf9SHong Zhang } 1244e0b74bf9SHong Zhang 1245eb3ef3b2SHong Zhang PetscErrorCode MatMatTransposeSolve_MUMPS(Mat A,Mat Bt,Mat X) 1246eb3ef3b2SHong Zhang { 1247eb3ef3b2SHong Zhang PetscErrorCode ierr; 1248eb3ef3b2SHong Zhang PetscBool flg; 1249eb3ef3b2SHong Zhang Mat B; 1250eb3ef3b2SHong Zhang 1251eb3ef3b2SHong Zhang PetscFunctionBegin; 1252eb3ef3b2SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)Bt,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 1253eb3ef3b2SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)Bt),PETSC_ERR_ARG_WRONG,"Matrix Bt must be MATAIJ matrix"); 1254eb3ef3b2SHong Zhang 1255eb3ef3b2SHong Zhang /* Create B=Bt^T that uses Bt's data structure */ 1256eb3ef3b2SHong Zhang ierr = MatCreateTranspose(Bt,&B);CHKERRQ(ierr); 1257eb3ef3b2SHong Zhang 12580e6b8875SHong Zhang ierr = MatMatSolve_MUMPS(A,B,X);CHKERRQ(ierr); 1259eb3ef3b2SHong Zhang ierr = MatDestroy(&B);CHKERRQ(ierr); 1260eb3ef3b2SHong Zhang PetscFunctionReturn(0); 1261eb3ef3b2SHong Zhang } 1262eb3ef3b2SHong Zhang 1263ace3df97SHong Zhang #if !defined(PETSC_USE_COMPLEX) 1264a58c3f20SHong Zhang /* 1265a58c3f20SHong Zhang input: 1266a58c3f20SHong Zhang F: numeric factor 1267a58c3f20SHong Zhang output: 1268a58c3f20SHong Zhang nneg: total number of negative pivots 126919d49a3bSHong Zhang nzero: total number of zero pivots 127019d49a3bSHong Zhang npos: (global dimension of F) - nneg - nzero 1271a58c3f20SHong Zhang */ 1272dfbe8321SBarry Smith PetscErrorCode MatGetInertia_SBAIJMUMPS(Mat F,int *nneg,int *nzero,int *npos) 1273a58c3f20SHong Zhang { 1274e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1275dfbe8321SBarry Smith PetscErrorCode ierr; 1276c1490034SHong Zhang PetscMPIInt size; 1277a58c3f20SHong Zhang 1278a58c3f20SHong Zhang PetscFunctionBegin; 1279ce94432eSBarry Smith ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&size);CHKERRQ(ierr); 1280bcb30aebSHong Zhang /* MUMPS 4.3.1 calls ScaLAPACK when ICNTL(13)=0 (default), which does not offer the possibility to compute the inertia of a dense matrix. Set ICNTL(13)=1 to skip ScaLAPACK */ 1281a5e57a09SHong Zhang if (size > 1 && mumps->id.ICNTL(13) != 1) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"ICNTL(13)=%d. -mat_mumps_icntl_13 must be set as 1 for correct global matrix inertia\n",mumps->id.INFOG(13)); 1282ed85ac9fSHong Zhang 1283710ac8efSHong Zhang if (nneg) *nneg = mumps->id.INFOG(12); 1284ed85ac9fSHong Zhang if (nzero || npos) { 1285ed85ac9fSHong Zhang if (mumps->id.ICNTL(24) != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"-mat_mumps_icntl_24 must be set as 1 for null pivot row detection"); 1286710ac8efSHong Zhang if (nzero) *nzero = mumps->id.INFOG(28); 1287710ac8efSHong Zhang if (npos) *npos = F->rmap->N - (mumps->id.INFOG(12) + mumps->id.INFOG(28)); 1288a58c3f20SHong Zhang } 1289a58c3f20SHong Zhang PetscFunctionReturn(0); 1290a58c3f20SHong Zhang } 129119d49a3bSHong Zhang #endif 1292a58c3f20SHong Zhang 12933ab56b82SJunchao Zhang PetscErrorCode MatMumpsGatherNonzerosOnMaster(MatReuse reuse,Mat_MUMPS *mumps) 12943ab56b82SJunchao Zhang { 12953ab56b82SJunchao Zhang PetscErrorCode ierr; 12966ac9f4daSSatish Balay PetscInt i,nz=0,*irn,*jcn=0; 12976ac9f4daSSatish Balay PetscScalar *val=0; 12983ab56b82SJunchao Zhang PetscMPIInt mpinz,*recvcount=NULL,*displs=NULL; 12993ab56b82SJunchao Zhang 13003ab56b82SJunchao Zhang PetscFunctionBegin; 13013ab56b82SJunchao Zhang if (mumps->omp_comm_size > 1) { 13023ab56b82SJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { 13033ab56b82SJunchao Zhang /* master first gathers counts of nonzeros to receive */ 13043ab56b82SJunchao Zhang if (mumps->is_omp_master) { ierr = PetscMalloc2(mumps->omp_comm_size,&recvcount,mumps->omp_comm_size,&displs);CHKERRQ(ierr); } 13053ab56b82SJunchao Zhang ierr = PetscMPIIntCast(mumps->nz,&mpinz);CHKERRQ(ierr); 13063ab56b82SJunchao Zhang ierr = MPI_Gather(&mpinz,1,MPI_INT,recvcount,1,MPI_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 13073ab56b82SJunchao Zhang 13083ab56b82SJunchao Zhang /* master allocates memory to receive nonzeros */ 13093ab56b82SJunchao Zhang if (mumps->is_omp_master) { 13103ab56b82SJunchao Zhang displs[0] = 0; 13113ab56b82SJunchao Zhang for (i=1; i<mumps->omp_comm_size; i++) displs[i] = displs[i-1] + recvcount[i-1]; 13123ab56b82SJunchao Zhang nz = displs[mumps->omp_comm_size-1] + recvcount[mumps->omp_comm_size-1]; 13133ab56b82SJunchao Zhang ierr = PetscMalloc(2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar),&irn);CHKERRQ(ierr); 13143ab56b82SJunchao Zhang jcn = irn + nz; 13153ab56b82SJunchao Zhang val = (PetscScalar*)(jcn + nz); 13163ab56b82SJunchao Zhang } 13173ab56b82SJunchao Zhang 13183ab56b82SJunchao Zhang /* save the gatherv plan */ 13193ab56b82SJunchao Zhang mumps->mpinz = mpinz; /* used as send count */ 13203ab56b82SJunchao Zhang mumps->recvcount = recvcount; 13213ab56b82SJunchao Zhang mumps->displs = displs; 13223ab56b82SJunchao Zhang 13233ab56b82SJunchao Zhang /* master gathers nonzeros */ 13243ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->irn,mpinz,MPIU_INT,irn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 13253ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->jcn,mpinz,MPIU_INT,jcn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 13263ab56b82SJunchao Zhang ierr = MPI_Gatherv(mumps->val,mpinz,MPIU_SCALAR,val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 13273ab56b82SJunchao Zhang 13283ab56b82SJunchao Zhang /* master frees its row/col/val and replaces them with bigger arrays */ 13293ab56b82SJunchao Zhang if (mumps->is_omp_master) { 13303ab56b82SJunchao Zhang ierr = PetscFree(mumps->irn);CHKERRQ(ierr); /* irn/jcn/val are allocated together so free only irn */ 13313ab56b82SJunchao Zhang mumps->nz = nz; /* it is a sum of mpinz over omp_comm */ 13323ab56b82SJunchao Zhang mumps->irn = irn; 13333ab56b82SJunchao Zhang mumps->jcn = jcn; 13343ab56b82SJunchao Zhang mumps->val = val; 13353ab56b82SJunchao Zhang } 13363ab56b82SJunchao Zhang } else { 13373ab56b82SJunchao Zhang ierr = MPI_Gatherv((mumps->is_omp_master?MPI_IN_PLACE:mumps->val),mumps->mpinz,MPIU_SCALAR,mumps->val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr); 13383ab56b82SJunchao Zhang } 13393ab56b82SJunchao Zhang } 13403ab56b82SJunchao Zhang PetscFunctionReturn(0); 13413ab56b82SJunchao Zhang } 13423ab56b82SJunchao Zhang 13430481f469SBarry Smith PetscErrorCode MatFactorNumeric_MUMPS(Mat F,Mat A,const MatFactorInfo *info) 1344af281ebdSHong Zhang { 1345e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)(F)->data; 13466849ba73SBarry Smith PetscErrorCode ierr; 1347ace3abfcSBarry Smith PetscBool isMPIAIJ; 1348397b6df1SKris Buschelman 1349397b6df1SKris Buschelman PetscFunctionBegin; 13506baea169SHong Zhang if (mumps->id.INFOG(1) < 0) { 13512aca8efcSHong Zhang if (mumps->id.INFOG(1) == -6) { 13522aca8efcSHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called with singular matrix structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 13536baea169SHong Zhang } 13546baea169SHong Zhang ierr = PetscInfo2(A,"MatFactorNumeric is called after analysis phase fails, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 13552aca8efcSHong Zhang PetscFunctionReturn(0); 13562aca8efcSHong Zhang } 13576baea169SHong Zhang 1358a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_REUSE_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 13593ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_REUSE_MATRIX,mumps);CHKERRQ(ierr); 1360397b6df1SKris Buschelman 1361397b6df1SKris Buschelman /* numerical factorization phase */ 1362329ec9b3SHong Zhang /*-------------------------------*/ 1363a5e57a09SHong Zhang mumps->id.job = JOB_FACTNUMERIC; 13644e34a73bSHong Zhang if (!mumps->id.ICNTL(18)) { /* A is centralized */ 1365a5e57a09SHong Zhang if (!mumps->myid) { 1366940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 1367397b6df1SKris Buschelman } 1368397b6df1SKris Buschelman } else { 1369940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 1370397b6df1SKris Buschelman } 13713ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 1372a5e57a09SHong Zhang if (mumps->id.INFOG(1) < 0) { 1373c0d63f2fSHong Zhang if (A->erroriffailure) { 1374c0d63f2fSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 1375151787a6SHong Zhang } else { 1376c0d63f2fSHong Zhang if (mumps->id.INFOG(1) == -10) { /* numerically singular matrix */ 13772aca8efcSHong Zhang ierr = PetscInfo2(F,"matrix is numerically singular, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1378603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 1379c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -13) { 1380c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, cannot allocate required memory %d megabytes\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1381603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 1382c0d63f2fSHong Zhang } else if (mumps->id.INFOG(1) == -8 || mumps->id.INFOG(1) == -9 || (-16 < mumps->id.INFOG(1) && mumps->id.INFOG(1) < -10) ) { 1383c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d, problem with workarray \n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1384603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 13852aca8efcSHong Zhang } else { 1386c0d63f2fSHong Zhang ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1387603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 1388151787a6SHong Zhang } 13892aca8efcSHong Zhang } 1390397b6df1SKris Buschelman } 1391a5e57a09SHong Zhang if (!mumps->myid && mumps->id.ICNTL(16) > 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB," mumps->id.ICNTL(16):=%d\n",mumps->id.INFOG(16)); 1392397b6df1SKris Buschelman 1393b3cb21ddSStefano Zampini F->assembled = PETSC_TRUE; 1394a5e57a09SHong Zhang mumps->matstruc = SAME_NONZERO_PATTERN; 1395b3cb21ddSStefano Zampini if (F->schur) { /* reset Schur status to unfactored */ 13963cb7dd0eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 1397c70f7ee4SJunchao Zhang F->schur->offloadmask = PETSC_OFFLOAD_CPU; 13983cb7dd0eSStefano Zampini #endif 1399b3cb21ddSStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 1400b3cb21ddSStefano Zampini mumps->id.ICNTL(19) = 2; 1401b3cb21ddSStefano Zampini ierr = MatTranspose(F->schur,MAT_INPLACE_MATRIX,&F->schur);CHKERRQ(ierr); 1402b3cb21ddSStefano Zampini } 1403b3cb21ddSStefano Zampini ierr = MatFactorRestoreSchurComplement(F,NULL,MAT_FACTOR_SCHUR_UNFACTORED);CHKERRQ(ierr); 1404b3cb21ddSStefano Zampini } 140567877ebaSShri Abhyankar 1406066565c5SStefano Zampini /* just to be sure that ICNTL(19) value returned by a call from MatMumpsGetIcntl is always consistent */ 1407066565c5SStefano Zampini if (!mumps->sym && mumps->id.ICNTL(19) && mumps->id.ICNTL(19) != 1) mumps->id.ICNTL(19) = 3; 1408066565c5SStefano Zampini 14093ab56b82SJunchao Zhang if (!mumps->is_omp_master) mumps->id.INFO(23) = 0; 14102d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 141167877ebaSShri Abhyankar PetscInt lsol_loc; 141267877ebaSShri Abhyankar PetscScalar *sol_loc; 14132205254eSKarl Rupp 1414c2093ab7SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&isMPIAIJ);CHKERRQ(ierr); 1415c2093ab7SHong Zhang 1416c2093ab7SHong Zhang /* distributed solution; Create x_seq=sol_loc for repeated use */ 1417c2093ab7SHong Zhang if (mumps->x_seq) { 1418c2093ab7SHong Zhang ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr); 1419c2093ab7SHong Zhang ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr); 1420c2093ab7SHong Zhang ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr); 1421c2093ab7SHong Zhang } 1422a5e57a09SHong Zhang lsol_loc = mumps->id.INFO(23); /* length of sol_loc */ 1423dcca6d9dSJed Brown ierr = PetscMalloc2(lsol_loc,&sol_loc,lsol_loc,&mumps->id.isol_loc);CHKERRQ(ierr); 1424a5e57a09SHong Zhang mumps->id.lsol_loc = lsol_loc; 1425940cd9d6SSatish Balay mumps->id.sol_loc = (MumpsScalar*)sol_loc; 1426a5e57a09SHong Zhang ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,lsol_loc,sol_loc,&mumps->x_seq);CHKERRQ(ierr); 142767877ebaSShri Abhyankar } 14289880c9b4SStefano Zampini ierr = PetscLogFlops(mumps->id.RINFO(2));CHKERRQ(ierr); 1429397b6df1SKris Buschelman PetscFunctionReturn(0); 1430397b6df1SKris Buschelman } 1431397b6df1SKris Buschelman 14329a2535b5SHong Zhang /* Sets MUMPS options from the options database */ 14339a2535b5SHong Zhang PetscErrorCode PetscSetMUMPSFromOptions(Mat F, Mat A) 1434dcd589f8SShri Abhyankar { 1435e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1436dcd589f8SShri Abhyankar PetscErrorCode ierr; 1437a0e18203SThibaut Appel PetscInt icntl,info[80],i,ninfo=80; 1438ace3abfcSBarry Smith PetscBool flg; 1439dcd589f8SShri Abhyankar 1440dcd589f8SShri Abhyankar PetscFunctionBegin; 1441ce94432eSBarry Smith ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MUMPS Options","Mat");CHKERRQ(ierr); 14429a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_1","ICNTL(1): output stream for error messages","None",mumps->id.ICNTL(1),&icntl,&flg);CHKERRQ(ierr); 14439a2535b5SHong Zhang if (flg) mumps->id.ICNTL(1) = icntl; 14449a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_2","ICNTL(2): output stream for diagnostic printing, statistics, and warning","None",mumps->id.ICNTL(2),&icntl,&flg);CHKERRQ(ierr); 14459a2535b5SHong Zhang if (flg) mumps->id.ICNTL(2) = icntl; 14469a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_3","ICNTL(3): output stream for global information, collected on the host","None",mumps->id.ICNTL(3),&icntl,&flg);CHKERRQ(ierr); 14479a2535b5SHong Zhang if (flg) mumps->id.ICNTL(3) = icntl; 1448dcd589f8SShri Abhyankar 14499a2535b5SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_4","ICNTL(4): level of printing (0 to 4)","None",mumps->id.ICNTL(4),&icntl,&flg);CHKERRQ(ierr); 14509a2535b5SHong Zhang if (flg) mumps->id.ICNTL(4) = icntl; 14519a2535b5SHong Zhang if (mumps->id.ICNTL(4) || PetscLogPrintInfo) mumps->id.ICNTL(3) = 6; /* resume MUMPS default id.ICNTL(3) = 6 */ 14529a2535b5SHong Zhang 1453d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_6","ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7)","None",mumps->id.ICNTL(6),&icntl,&flg);CHKERRQ(ierr); 14549a2535b5SHong Zhang if (flg) mumps->id.ICNTL(6) = icntl; 14559a2535b5SHong Zhang 1456d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_7","ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis","None",mumps->id.ICNTL(7),&icntl,&flg);CHKERRQ(ierr); 1457dcd589f8SShri Abhyankar if (flg) { 14582d4298aeSJunchao Zhang if (icntl== 1 && mumps->petsc_size > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"pivot order be set by the user in PERM_IN -- not supported by the PETSc/MUMPS interface\n"); 14592205254eSKarl Rupp else mumps->id.ICNTL(7) = icntl; 1460dcd589f8SShri Abhyankar } 1461e0b74bf9SHong Zhang 14620298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_8","ICNTL(8): scaling strategy (-2 to 8 or 77)","None",mumps->id.ICNTL(8),&mumps->id.ICNTL(8),NULL);CHKERRQ(ierr); 1463d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_9","ICNTL(9): computes the solution using A or A^T","None",mumps->id.ICNTL(9),&mumps->id.ICNTL(9),NULL);CHKERRQ(ierr); handled by MatSolveTranspose_MUMPS() */ 14640298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_10","ICNTL(10): max num of refinements","None",mumps->id.ICNTL(10),&mumps->id.ICNTL(10),NULL);CHKERRQ(ierr); 1465d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_11","ICNTL(11): statistics related to an error analysis (via -ksp_view)","None",mumps->id.ICNTL(11),&mumps->id.ICNTL(11),NULL);CHKERRQ(ierr); 1466d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_12","ICNTL(12): an ordering strategy for symmetric matrices (0 to 3)","None",mumps->id.ICNTL(12),&mumps->id.ICNTL(12),NULL);CHKERRQ(ierr); 1467d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_13","ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting","None",mumps->id.ICNTL(13),&mumps->id.ICNTL(13),NULL);CHKERRQ(ierr); 1468d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_14","ICNTL(14): percentage increase in the estimated working space","None",mumps->id.ICNTL(14),&mumps->id.ICNTL(14),NULL);CHKERRQ(ierr); 1469d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_19","ICNTL(19): computes the Schur complement","None",mumps->id.ICNTL(19),&mumps->id.ICNTL(19),NULL);CHKERRQ(ierr); 147059ac8732SStefano Zampini if (mumps->id.ICNTL(19) <= 0 || mumps->id.ICNTL(19) > 3) { /* reset any schur data (if any) */ 1471b3cb21ddSStefano Zampini ierr = MatDestroy(&F->schur);CHKERRQ(ierr); 147259ac8732SStefano Zampini ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr); 147359ac8732SStefano Zampini } 14744e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_20","ICNTL(20): the format (dense or sparse) of the right-hand sides","None",mumps->id.ICNTL(20),&mumps->id.ICNTL(20),NULL);CHKERRQ(ierr); -- sparse rhs is not supported in PETSc API */ 1475d341cd04SHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_21","ICNTL(21): the distribution (centralized or distributed) of the solution vectors","None",mumps->id.ICNTL(21),&mumps->id.ICNTL(21),NULL);CHKERRQ(ierr); we only use distributed solution vector */ 14769a2535b5SHong Zhang 1477d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_22","ICNTL(22): in-core/out-of-core factorization and solve (0 or 1)","None",mumps->id.ICNTL(22),&mumps->id.ICNTL(22),NULL);CHKERRQ(ierr); 14780298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_23","ICNTL(23): max size of the working memory (MB) that can allocate per processor","None",mumps->id.ICNTL(23),&mumps->id.ICNTL(23),NULL);CHKERRQ(ierr); 14790298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_24","ICNTL(24): detection of null pivot rows (0 or 1)","None",mumps->id.ICNTL(24),&mumps->id.ICNTL(24),NULL);CHKERRQ(ierr); 14809a2535b5SHong Zhang if (mumps->id.ICNTL(24)) { 14819a2535b5SHong Zhang mumps->id.ICNTL(13) = 1; /* turn-off ScaLAPACK to help with the correct detection of null pivots */ 1482d7ebd59bSHong Zhang } 1483d7ebd59bSHong Zhang 1484b4ed93dbSHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_25","ICNTL(25): computes a solution of a deficient matrix and a null space basis","None",mumps->id.ICNTL(25),&mumps->id.ICNTL(25),NULL);CHKERRQ(ierr); 1485d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_26","ICNTL(26): drives the solution phase if a Schur complement matrix","None",mumps->id.ICNTL(26),&mumps->id.ICNTL(26),NULL);CHKERRQ(ierr); 14862cd7d884SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_27","ICNTL(27): the blocking size for multiple right-hand sides","None",mumps->id.ICNTL(27),&mumps->id.ICNTL(27),NULL);CHKERRQ(ierr); 14870298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_28","ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering","None",mumps->id.ICNTL(28),&mumps->id.ICNTL(28),NULL);CHKERRQ(ierr); 1488d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_29","ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis","None",mumps->id.ICNTL(29),&mumps->id.ICNTL(29),NULL);CHKERRQ(ierr); 148989a9c03aSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_30","ICNTL(30): compute user-specified set of entries in inv(A)","None",mumps->id.ICNTL(30),&mumps->id.ICNTL(30),NULL);CHKERRQ(ierr); */ /* call MatMumpsGetInverse() directly */ 1490d341cd04SHong Zhang ierr = PetscOptionsInt("-mat_mumps_icntl_31","ICNTL(31): indicates which factors may be discarded during factorization","None",mumps->id.ICNTL(31),&mumps->id.ICNTL(31),NULL);CHKERRQ(ierr); 14914e34a73bSHong Zhang /* ierr = PetscOptionsInt("-mat_mumps_icntl_32","ICNTL(32): performs the forward elemination of the right-hand sides during factorization","None",mumps->id.ICNTL(32),&mumps->id.ICNTL(32),NULL);CHKERRQ(ierr); -- not supported by PETSc API */ 14920298fd71SBarry Smith ierr = PetscOptionsInt("-mat_mumps_icntl_33","ICNTL(33): compute determinant","None",mumps->id.ICNTL(33),&mumps->id.ICNTL(33),NULL);CHKERRQ(ierr); 1493a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_35","ICNTL(35): activates Block Low Rank (BLR) based factorization","None",mumps->id.ICNTL(35),&mumps->id.ICNTL(35),NULL);CHKERRQ(ierr); 1494a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_36","ICNTL(36): choice of BLR factorization variant","None",mumps->id.ICNTL(36),&mumps->id.ICNTL(36),NULL);CHKERRQ(ierr); 1495a0e18203SThibaut Appel ierr = PetscOptionsInt("-mat_mumps_icntl_38","ICNTL(38): estimated compression rate of LU factors with BLR","None",mumps->id.ICNTL(38),&mumps->id.ICNTL(38),NULL);CHKERRQ(ierr); 1496dcd589f8SShri Abhyankar 14970298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr); 14980298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr); 14990298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr); 15000298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr); 15010298fd71SBarry Smith ierr = PetscOptionsReal("-mat_mumps_cntl_5","CNTL(5): fixation for null pivots","None",mumps->id.CNTL(5),&mumps->id.CNTL(5),NULL);CHKERRQ(ierr); 1502b4ed93dbSHong Zhang ierr = PetscOptionsReal("-mat_mumps_cntl_7","CNTL(7): dropping parameter used during BLR","None",mumps->id.CNTL(7),&mumps->id.CNTL(7),NULL);CHKERRQ(ierr); 1503e5bb22a1SHong Zhang 15042a808120SBarry Smith ierr = PetscOptionsString("-mat_mumps_ooc_tmpdir", "out of core directory", "None", mumps->id.ooc_tmpdir, mumps->id.ooc_tmpdir, 256, NULL);CHKERRQ(ierr); 1505b34f08ffSHong Zhang 150616d797efSHong Zhang ierr = PetscOptionsIntArray("-mat_mumps_view_info","request INFO local to each processor","",info,&ninfo,NULL);CHKERRQ(ierr); 1507b34f08ffSHong Zhang if (ninfo) { 1508a0e18203SThibaut Appel if (ninfo > 80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"number of INFO %d must <= 80\n",ninfo); 1509b34f08ffSHong Zhang ierr = PetscMalloc1(ninfo,&mumps->info);CHKERRQ(ierr); 1510b34f08ffSHong Zhang mumps->ninfo = ninfo; 1511b34f08ffSHong Zhang for (i=0; i<ninfo; i++) { 1512a0e18203SThibaut Appel if (info[i] < 0 || info[i]>80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"index of INFO %d must between 1 and 80\n",ninfo); 15132a808120SBarry Smith else mumps->info[i] = info[i]; 1514b34f08ffSHong Zhang } 1515b34f08ffSHong Zhang } 1516b34f08ffSHong Zhang 15172a808120SBarry Smith ierr = PetscOptionsEnd();CHKERRQ(ierr); 1518dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1519dcd589f8SShri Abhyankar } 1520dcd589f8SShri Abhyankar 1521f697e70eSHong Zhang PetscErrorCode PetscInitializeMUMPS(Mat A,Mat_MUMPS *mumps) 1522dcd589f8SShri Abhyankar { 1523dcd589f8SShri Abhyankar PetscErrorCode ierr; 15247c405c4aSJunchao Zhang PetscInt nthreads=0; 1525dcd589f8SShri Abhyankar 1526dcd589f8SShri Abhyankar PetscFunctionBegin; 15273ab56b82SJunchao Zhang mumps->petsc_comm = PetscObjectComm((PetscObject)A); 15283ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->petsc_comm,&mumps->petsc_size);CHKERRQ(ierr); 15293ab56b82SJunchao Zhang ierr = MPI_Comm_rank(mumps->petsc_comm,&mumps->myid);CHKERRQ(ierr); /* so that code like "if (!myid)" still works even if mumps_comm is different */ 15303ab56b82SJunchao Zhang 15317c405c4aSJunchao Zhang ierr = PetscOptionsHasName(NULL,NULL,"-mat_mumps_use_omp_threads",&mumps->use_petsc_omp_support);CHKERRQ(ierr); 15327c405c4aSJunchao Zhang if (mumps->use_petsc_omp_support) nthreads = -1; /* -1 will let PetscOmpCtrlCreate() guess a proper value when user did not supply one */ 15337c405c4aSJunchao Zhang ierr = PetscOptionsGetInt(NULL,NULL,"-mat_mumps_use_omp_threads",&nthreads,NULL);CHKERRQ(ierr); 15343ab56b82SJunchao Zhang if (mumps->use_petsc_omp_support) { 15353ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT) 15363ab56b82SJunchao Zhang ierr = PetscOmpCtrlCreate(mumps->petsc_comm,nthreads,&mumps->omp_ctrl);CHKERRQ(ierr); 15373ab56b82SJunchao Zhang ierr = PetscOmpCtrlGetOmpComms(mumps->omp_ctrl,&mumps->omp_comm,&mumps->mumps_comm,&mumps->is_omp_master);CHKERRQ(ierr); 15383ab56b82SJunchao Zhang #else 1539217d3b1eSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"the system does not have PETSc OpenMP support but you added the -mat_mumps_use_omp_threads option. Configure PETSc with --with-openmp --download-hwloc (or --with-hwloc) to enable it, see more in MATSOLVERMUMPS manual\n"); 15403ab56b82SJunchao Zhang #endif 15413ab56b82SJunchao Zhang } else { 15423ab56b82SJunchao Zhang mumps->omp_comm = PETSC_COMM_SELF; 15433ab56b82SJunchao Zhang mumps->mumps_comm = mumps->petsc_comm; 15443ab56b82SJunchao Zhang mumps->is_omp_master = PETSC_TRUE; 15453ab56b82SJunchao Zhang } 15463ab56b82SJunchao Zhang ierr = MPI_Comm_size(mumps->omp_comm,&mumps->omp_comm_size);CHKERRQ(ierr); 15472205254eSKarl Rupp 15482d4298aeSJunchao Zhang mumps->id.comm_fortran = MPI_Comm_c2f(mumps->mumps_comm); 1549f697e70eSHong Zhang mumps->id.job = JOB_INIT; 1550f697e70eSHong Zhang mumps->id.par = 1; /* host participates factorizaton and solve */ 1551f697e70eSHong Zhang mumps->id.sym = mumps->sym; 15523ab56b82SJunchao Zhang 15533ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 15546c62bb2dSHong Zhang if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in PetscInitializeMUMPS: INFOG(1)=%d\n",mumps->id.INFOG(1)); 15553ab56b82SJunchao Zhang 15563ab56b82SJunchao Zhang /* copy MUMPS default control values from master to slaves. Although slaves do not call MUMPS, they may access these values in code. 15573ab56b82SJunchao Zhang For example, ICNTL(9) is initialized to 1 by MUMPS and slaves check ICNTL(9) in MatSolve_MUMPS. 15583ab56b82SJunchao Zhang */ 1559*c3714a1dSJunchao Zhang ierr = MPI_Bcast(mumps->id.icntl,40,MPI_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 Manual Section 9 */ 15603ab56b82SJunchao Zhang ierr = MPI_Bcast(mumps->id.cntl, 15,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr); 1561f697e70eSHong Zhang 15620298fd71SBarry Smith mumps->scat_rhs = NULL; 15630298fd71SBarry Smith mumps->scat_sol = NULL; 15649a2535b5SHong Zhang 156570544d5fSHong Zhang /* set PETSc-MUMPS default options - override MUMPS default */ 15669a2535b5SHong Zhang mumps->id.ICNTL(3) = 0; 15679a2535b5SHong Zhang mumps->id.ICNTL(4) = 0; 15682d4298aeSJunchao Zhang if (mumps->petsc_size == 1) { 15699a2535b5SHong Zhang mumps->id.ICNTL(18) = 0; /* centralized assembled matrix input */ 15709a2535b5SHong Zhang } else { 15719a2535b5SHong Zhang mumps->id.ICNTL(18) = 3; /* distributed assembled matrix input */ 15724e34a73bSHong Zhang mumps->id.ICNTL(20) = 0; /* rhs is in dense format */ 157370544d5fSHong Zhang mumps->id.ICNTL(21) = 1; /* distributed solution */ 15749a2535b5SHong Zhang } 15756444a565SStefano Zampini 15766444a565SStefano Zampini /* schur */ 15776444a565SStefano Zampini mumps->id.size_schur = 0; 15786444a565SStefano Zampini mumps->id.listvar_schur = NULL; 15796444a565SStefano Zampini mumps->id.schur = NULL; 1580b5fa320bSStefano Zampini mumps->sizeredrhs = 0; 158159ac8732SStefano Zampini mumps->schur_sol = NULL; 158259ac8732SStefano Zampini mumps->schur_sizesol = 0; 1583dcd589f8SShri Abhyankar PetscFunctionReturn(0); 1584dcd589f8SShri Abhyankar } 1585dcd589f8SShri Abhyankar 15869a625307SHong Zhang PetscErrorCode MatFactorSymbolic_MUMPS_ReportIfError(Mat F,Mat A,const MatFactorInfo *info,Mat_MUMPS *mumps) 15875cd7cf9dSHong Zhang { 15885cd7cf9dSHong Zhang PetscErrorCode ierr; 15895cd7cf9dSHong Zhang 15905cd7cf9dSHong Zhang PetscFunctionBegin; 15915cd7cf9dSHong Zhang if (mumps->id.INFOG(1) < 0) { 15925cd7cf9dSHong Zhang if (A->erroriffailure) { 15935cd7cf9dSHong Zhang SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in analysis phase: INFOG(1)=%d\n",mumps->id.INFOG(1)); 15945cd7cf9dSHong Zhang } else { 15955cd7cf9dSHong Zhang if (mumps->id.INFOG(1) == -6) { 15965cd7cf9dSHong Zhang ierr = PetscInfo2(F,"matrix is singular in structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1597603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_STRUCT_ZEROPIVOT; 15985cd7cf9dSHong Zhang } else if (mumps->id.INFOG(1) == -5 || mumps->id.INFOG(1) == -7) { 15995cd7cf9dSHong Zhang ierr = PetscInfo2(F,"problem of workspace, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1600603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OUTMEMORY; 16015cd7cf9dSHong Zhang } else { 16025cd7cf9dSHong Zhang ierr = PetscInfo2(F,"Error reported by MUMPS in analysis phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr); 1603603e8f96SBarry Smith F->factorerrortype = MAT_FACTOR_OTHER; 16045cd7cf9dSHong Zhang } 16055cd7cf9dSHong Zhang } 16065cd7cf9dSHong Zhang } 16075cd7cf9dSHong Zhang PetscFunctionReturn(0); 16085cd7cf9dSHong Zhang } 16095cd7cf9dSHong Zhang 1610a5e57a09SHong Zhang /* Note Petsc r(=c) permutation is used when mumps->id.ICNTL(7)==1 with centralized assembled matrix input; otherwise r and c are ignored */ 16110481f469SBarry Smith PetscErrorCode MatLUFactorSymbolic_AIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1612b24902e0SBarry Smith { 1613e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1614dcd589f8SShri Abhyankar PetscErrorCode ierr; 161567877ebaSShri Abhyankar Vec b; 161667877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1617397b6df1SKris Buschelman 1618397b6df1SKris Buschelman PetscFunctionBegin; 1619a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1620dcd589f8SShri Abhyankar 16219a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16229a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1623dcd589f8SShri Abhyankar 1624a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16253ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1626dcd589f8SShri Abhyankar 162767877ebaSShri Abhyankar /* analysis phase */ 162867877ebaSShri Abhyankar /*----------------*/ 1629a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1630a5e57a09SHong Zhang mumps->id.n = M; 1631a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 163267877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1633a5e57a09SHong Zhang if (!mumps->myid) { 1634a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1635a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1636940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 163767877ebaSShri Abhyankar } 1638a5e57a09SHong Zhang if (mumps->id.ICNTL(7) == 1) { /* use user-provide matrix ordering - assuming r = c ordering */ 16395248a706SHong Zhang /* 16405248a706SHong Zhang PetscBool flag; 16415248a706SHong Zhang ierr = ISEqual(r,c,&flag);CHKERRQ(ierr); 16425248a706SHong Zhang if (!flag) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"row_perm != col_perm"); 16435248a706SHong Zhang ierr = ISView(r,PETSC_VIEWER_STDOUT_SELF); 16445248a706SHong Zhang */ 1645a5e57a09SHong Zhang if (!mumps->myid) { 1646e0b74bf9SHong Zhang const PetscInt *idx; 1647e0b74bf9SHong Zhang PetscInt i,*perm_in; 16482205254eSKarl Rupp 1649785e854fSJed Brown ierr = PetscMalloc1(M,&perm_in);CHKERRQ(ierr); 1650e0b74bf9SHong Zhang ierr = ISGetIndices(r,&idx);CHKERRQ(ierr); 16512205254eSKarl Rupp 1652a5e57a09SHong Zhang mumps->id.perm_in = perm_in; 1653e0b74bf9SHong Zhang for (i=0; i<M; i++) perm_in[i] = idx[i]+1; /* perm_in[]: start from 1, not 0! */ 1654e0b74bf9SHong Zhang ierr = ISRestoreIndices(r,&idx);CHKERRQ(ierr); 1655e0b74bf9SHong Zhang } 1656e0b74bf9SHong Zhang } 165767877ebaSShri Abhyankar } 165867877ebaSShri Abhyankar break; 165967877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1660a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1661a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1662a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1663940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 166467877ebaSShri Abhyankar } 166567877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 16662a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 166794b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 16686bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 166967877ebaSShri Abhyankar break; 167067877ebaSShri Abhyankar } 16713ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 16725cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 167367877ebaSShri Abhyankar 1674719d5645SBarry Smith F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1675dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 167651d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 16774e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 1678eb3ef3b2SHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 1679b24902e0SBarry Smith PetscFunctionReturn(0); 1680b24902e0SBarry Smith } 1681b24902e0SBarry Smith 1682450b117fSShri Abhyankar /* Note the Petsc r and c permutations are ignored */ 1683450b117fSShri Abhyankar PetscErrorCode MatLUFactorSymbolic_BAIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1684450b117fSShri Abhyankar { 1685e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1686dcd589f8SShri Abhyankar PetscErrorCode ierr; 168767877ebaSShri Abhyankar Vec b; 168867877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1689450b117fSShri Abhyankar 1690450b117fSShri Abhyankar PetscFunctionBegin; 1691a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1692dcd589f8SShri Abhyankar 16939a2535b5SHong Zhang /* Set MUMPS options from the options database */ 16949a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1695dcd589f8SShri Abhyankar 1696a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 16973ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 169867877ebaSShri Abhyankar 169967877ebaSShri Abhyankar /* analysis phase */ 170067877ebaSShri Abhyankar /*----------------*/ 1701a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1702a5e57a09SHong Zhang mumps->id.n = M; 1703a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 170467877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1705a5e57a09SHong Zhang if (!mumps->myid) { 1706a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1707a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1708940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 170967877ebaSShri Abhyankar } 171067877ebaSShri Abhyankar } 171167877ebaSShri Abhyankar break; 171267877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1713a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1714a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1715a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1716940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 171767877ebaSShri Abhyankar } 171867877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 17192a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 172094b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 17216bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 172267877ebaSShri Abhyankar break; 172367877ebaSShri Abhyankar } 17243ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 17255cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 172667877ebaSShri Abhyankar 1727450b117fSShri Abhyankar F->ops->lufactornumeric = MatFactorNumeric_MUMPS; 1728dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 172951d5961aSHong Zhang F->ops->solvetranspose = MatSolveTranspose_MUMPS; 1730450b117fSShri Abhyankar PetscFunctionReturn(0); 1731450b117fSShri Abhyankar } 1732b24902e0SBarry Smith 1733141f4205SHong Zhang /* Note the Petsc r permutation and factor info are ignored */ 173467877ebaSShri Abhyankar PetscErrorCode MatCholeskyFactorSymbolic_MUMPS(Mat F,Mat A,IS r,const MatFactorInfo *info) 1735b24902e0SBarry Smith { 1736e69c285eSBarry Smith Mat_MUMPS *mumps = (Mat_MUMPS*)F->data; 1737dcd589f8SShri Abhyankar PetscErrorCode ierr; 173867877ebaSShri Abhyankar Vec b; 173967877ebaSShri Abhyankar const PetscInt M = A->rmap->N; 1740397b6df1SKris Buschelman 1741397b6df1SKris Buschelman PetscFunctionBegin; 1742a5e57a09SHong Zhang mumps->matstruc = DIFFERENT_NONZERO_PATTERN; 1743dcd589f8SShri Abhyankar 17449a2535b5SHong Zhang /* Set MUMPS options from the options database */ 17459a2535b5SHong Zhang ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr); 1746dcd589f8SShri Abhyankar 1747a5e57a09SHong Zhang ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr); 17483ab56b82SJunchao Zhang ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr); 1749dcd589f8SShri Abhyankar 175067877ebaSShri Abhyankar /* analysis phase */ 175167877ebaSShri Abhyankar /*----------------*/ 1752a5e57a09SHong Zhang mumps->id.job = JOB_FACTSYMBOLIC; 1753a5e57a09SHong Zhang mumps->id.n = M; 1754a5e57a09SHong Zhang switch (mumps->id.ICNTL(18)) { 175567877ebaSShri Abhyankar case 0: /* centralized assembled matrix input */ 1756a5e57a09SHong Zhang if (!mumps->myid) { 1757a5e57a09SHong Zhang mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn; 1758a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1759940cd9d6SSatish Balay mumps->id.a = (MumpsScalar*)mumps->val; 176067877ebaSShri Abhyankar } 176167877ebaSShri Abhyankar } 176267877ebaSShri Abhyankar break; 176367877ebaSShri Abhyankar case 3: /* distributed assembled matrix input (size>1) */ 1764a5e57a09SHong Zhang mumps->id.nz_loc = mumps->nz; 1765a5e57a09SHong Zhang mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn; 1766a5e57a09SHong Zhang if (mumps->id.ICNTL(6)>1) { 1767940cd9d6SSatish Balay mumps->id.a_loc = (MumpsScalar*)mumps->val; 176867877ebaSShri Abhyankar } 176967877ebaSShri Abhyankar /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 17702a7a6963SBarry Smith ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr); 177194b42a18SJunchao Zhang ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr); 17726bf464f9SBarry Smith ierr = VecDestroy(&b);CHKERRQ(ierr); 177367877ebaSShri Abhyankar break; 177467877ebaSShri Abhyankar } 17753ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 17765cd7cf9dSHong Zhang ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr); 17775cd7cf9dSHong Zhang 17782792810eSHong Zhang F->ops->choleskyfactornumeric = MatFactorNumeric_MUMPS; 1779dcd589f8SShri Abhyankar F->ops->solve = MatSolve_MUMPS; 178051d5961aSHong Zhang F->ops->solvetranspose = MatSolve_MUMPS; 17814e34a73bSHong Zhang F->ops->matsolve = MatMatSolve_MUMPS; 178223a5080aSHong Zhang F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS; 17834e34a73bSHong Zhang #if defined(PETSC_USE_COMPLEX) 17840298fd71SBarry Smith F->ops->getinertia = NULL; 17854e34a73bSHong Zhang #else 17864e34a73bSHong Zhang F->ops->getinertia = MatGetInertia_SBAIJMUMPS; 1787db4efbfdSBarry Smith #endif 1788b24902e0SBarry Smith PetscFunctionReturn(0); 1789b24902e0SBarry Smith } 1790b24902e0SBarry Smith 179164e6c443SBarry Smith PetscErrorCode MatView_MUMPS(Mat A,PetscViewer viewer) 179274ed9c26SBarry Smith { 1793f6c57405SHong Zhang PetscErrorCode ierr; 179464e6c443SBarry Smith PetscBool iascii; 179564e6c443SBarry Smith PetscViewerFormat format; 1796e69c285eSBarry Smith Mat_MUMPS *mumps=(Mat_MUMPS*)A->data; 1797f6c57405SHong Zhang 1798f6c57405SHong Zhang PetscFunctionBegin; 179964e6c443SBarry Smith /* check if matrix is mumps type */ 180064e6c443SBarry Smith if (A->ops->solve != MatSolve_MUMPS) PetscFunctionReturn(0); 180164e6c443SBarry Smith 1802251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 180364e6c443SBarry Smith if (iascii) { 180464e6c443SBarry Smith ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 180564e6c443SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO) { 180664e6c443SBarry Smith ierr = PetscViewerASCIIPrintf(viewer,"MUMPS run parameters:\n");CHKERRQ(ierr); 1807a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," SYM (matrix type): %d \n",mumps->id.sym);CHKERRQ(ierr); 1808a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," PAR (host participation): %d \n",mumps->id.par);CHKERRQ(ierr); 1809a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(1) (output for error): %d \n",mumps->id.ICNTL(1));CHKERRQ(ierr); 1810a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(2) (output of diagnostic msg): %d \n",mumps->id.ICNTL(2));CHKERRQ(ierr); 1811a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(3) (output for global info): %d \n",mumps->id.ICNTL(3));CHKERRQ(ierr); 1812a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(4) (level of printing): %d \n",mumps->id.ICNTL(4));CHKERRQ(ierr); 1813a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(5) (input mat struct): %d \n",mumps->id.ICNTL(5));CHKERRQ(ierr); 1814a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(6) (matrix prescaling): %d \n",mumps->id.ICNTL(6));CHKERRQ(ierr); 1815d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(7) (sequential matrix ordering):%d \n",mumps->id.ICNTL(7));CHKERRQ(ierr); 1816d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(8) (scaling strategy): %d \n",mumps->id.ICNTL(8));CHKERRQ(ierr); 1817a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(10) (max num of refinements): %d \n",mumps->id.ICNTL(10));CHKERRQ(ierr); 1818a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(11) (error analysis): %d \n",mumps->id.ICNTL(11));CHKERRQ(ierr); 1819a5e57a09SHong Zhang if (mumps->id.ICNTL(11)>0) { 1820a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(4) (inf norm of input mat): %g\n",mumps->id.RINFOG(4));CHKERRQ(ierr); 1821a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(5) (inf norm of solution): %g\n",mumps->id.RINFOG(5));CHKERRQ(ierr); 1822a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(6) (inf norm of residual): %g\n",mumps->id.RINFOG(6));CHKERRQ(ierr); 1823a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(7),RINFOG(8) (backward error est): %g, %g\n",mumps->id.RINFOG(7),mumps->id.RINFOG(8));CHKERRQ(ierr); 1824a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(9) (error estimate): %g \n",mumps->id.RINFOG(9));CHKERRQ(ierr); 1825a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(10),RINFOG(11)(condition numbers): %g, %g\n",mumps->id.RINFOG(10),mumps->id.RINFOG(11));CHKERRQ(ierr); 1826f6c57405SHong Zhang } 1827a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(12) (efficiency control): %d \n",mumps->id.ICNTL(12));CHKERRQ(ierr); 1828a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(13) (efficiency control): %d \n",mumps->id.ICNTL(13));CHKERRQ(ierr); 1829a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(14) (percentage of estimated workspace increase): %d \n",mumps->id.ICNTL(14));CHKERRQ(ierr); 1830f6c57405SHong Zhang /* ICNTL(15-17) not used */ 1831a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(18) (input mat struct): %d \n",mumps->id.ICNTL(18));CHKERRQ(ierr); 1832d4ed72bbSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(19) (Schur complement info): %d \n",mumps->id.ICNTL(19));CHKERRQ(ierr); 1833a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(20) (rhs sparse pattern): %d \n",mumps->id.ICNTL(20));CHKERRQ(ierr); 1834ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," ICNTL(21) (solution struct): %d \n",mumps->id.ICNTL(21));CHKERRQ(ierr); 1835a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(22) (in-core/out-of-core facility): %d \n",mumps->id.ICNTL(22));CHKERRQ(ierr); 1836a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(23) (max size of memory can be allocated locally):%d \n",mumps->id.ICNTL(23));CHKERRQ(ierr); 1837c0165424SHong Zhang 1838a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(24) (detection of null pivot rows): %d \n",mumps->id.ICNTL(24));CHKERRQ(ierr); 1839a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(25) (computation of a null space basis): %d \n",mumps->id.ICNTL(25));CHKERRQ(ierr); 1840a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(26) (Schur options for rhs or solution): %d \n",mumps->id.ICNTL(26));CHKERRQ(ierr); 1841a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(27) (experimental parameter): %d \n",mumps->id.ICNTL(27));CHKERRQ(ierr); 1842a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(28) (use parallel or sequential ordering): %d \n",mumps->id.ICNTL(28));CHKERRQ(ierr); 1843a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(29) (parallel ordering): %d \n",mumps->id.ICNTL(29));CHKERRQ(ierr); 184442179a6aSHong Zhang 1845a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(30) (user-specified set of entries in inv(A)): %d \n",mumps->id.ICNTL(30));CHKERRQ(ierr); 1846a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(31) (factors is discarded in the solve phase): %d \n",mumps->id.ICNTL(31));CHKERRQ(ierr); 1847a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(33) (compute determinant): %d \n",mumps->id.ICNTL(33));CHKERRQ(ierr); 18486e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ICNTL(35) (activate BLR based factorization): %d \n",mumps->id.ICNTL(35));CHKERRQ(ierr); 1849a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(36) (choice of BLR factorization variant): %d \n",mumps->id.ICNTL(36));CHKERRQ(ierr); 1850a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," ICNTL(38) (estimated compression rate of LU factors): %d \n",mumps->id.ICNTL(38));CHKERRQ(ierr); 1851f6c57405SHong Zhang 1852a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(1) (relative pivoting threshold): %g \n",mumps->id.CNTL(1));CHKERRQ(ierr); 1853a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(2) (stopping criterion of refinement): %g \n",mumps->id.CNTL(2));CHKERRQ(ierr); 1854ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(3) (absolute pivoting threshold): %g \n",mumps->id.CNTL(3));CHKERRQ(ierr); 1855ca3dc52bSPierre Jolivet ierr = PetscViewerASCIIPrintf(viewer," CNTL(4) (value of static pivoting): %g \n",mumps->id.CNTL(4));CHKERRQ(ierr); 1856a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(5) (fixation for null pivots): %g \n",mumps->id.CNTL(5));CHKERRQ(ierr); 18576e32de5dSHong Zhang ierr = PetscViewerASCIIPrintf(viewer," CNTL(7) (dropping parameter for BLR): %g \n",mumps->id.CNTL(7));CHKERRQ(ierr); 1858f6c57405SHong Zhang 1859f6c57405SHong Zhang /* infomation local to each processor */ 186034ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(1) (local estimated flops for the elimination after analysis): \n");CHKERRQ(ierr); 18611575c14dSBarry Smith ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr); 1862a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(1));CHKERRQ(ierr); 18632a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 186434ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(2) (local estimated flops for the assembly after factorization): \n");CHKERRQ(ierr); 1865a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(2));CHKERRQ(ierr); 18662a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 186734ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " RINFO(3) (local estimated flops for the elimination after factorization): \n");CHKERRQ(ierr); 1868a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %g \n",mumps->myid,mumps->id.RINFO(3));CHKERRQ(ierr); 18692a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1870f6c57405SHong Zhang 187134ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(15) (estimated size of (in MB) MUMPS internal data for running numerical factorization): \n");CHKERRQ(ierr); 1872a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(15));CHKERRQ(ierr); 18732a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1874f6c57405SHong Zhang 187534ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(16) (size of (in MB) MUMPS internal data used during numerical factorization): \n");CHKERRQ(ierr); 1876a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(16));CHKERRQ(ierr); 18772a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1878f6c57405SHong Zhang 187934ed7027SBarry Smith ierr = PetscViewerASCIIPrintf(viewer, " INFO(23) (num of pivots eliminated on this processor after factorization): \n");CHKERRQ(ierr); 1880a5e57a09SHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(23));CHKERRQ(ierr); 18812a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1882b34f08ffSHong Zhang 1883a0e18203SThibaut Appel if (mumps->ninfo && mumps->ninfo <= 80){ 1884b34f08ffSHong Zhang PetscInt i; 1885b34f08ffSHong Zhang for (i=0; i<mumps->ninfo; i++){ 1886b34f08ffSHong Zhang ierr = PetscViewerASCIIPrintf(viewer, " INFO(%d): \n",mumps->info[i]);CHKERRQ(ierr); 1887b34f08ffSHong Zhang ierr = PetscViewerASCIISynchronizedPrintf(viewer," [%d] %d \n",mumps->myid,mumps->id.INFO(mumps->info[i]));CHKERRQ(ierr); 18882a808120SBarry Smith ierr = PetscViewerFlush(viewer);CHKERRQ(ierr); 1889b34f08ffSHong Zhang } 1890b34f08ffSHong Zhang } 18911575c14dSBarry Smith ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr); 1892f6c57405SHong Zhang 1893a5e57a09SHong Zhang if (!mumps->myid) { /* information from the host */ 1894a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(1) (global estimated flops for the elimination after analysis): %g \n",mumps->id.RINFOG(1));CHKERRQ(ierr); 1895a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(2) (global estimated flops for the assembly after factorization): %g \n",mumps->id.RINFOG(2));CHKERRQ(ierr); 1896a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RINFOG(3) (global estimated flops for the elimination after factorization): %g \n",mumps->id.RINFOG(3));CHKERRQ(ierr); 1897a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," (RINFOG(12) RINFOG(13))*2^INFOG(34) (determinant): (%g,%g)*(2^%d)\n",mumps->id.RINFOG(12),mumps->id.RINFOG(13),mumps->id.INFOG(34));CHKERRQ(ierr); 1898f6c57405SHong Zhang 1899a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(3) (estimated real workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(3));CHKERRQ(ierr); 1900a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(4) (estimated integer workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(4));CHKERRQ(ierr); 1901a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(5) (estimated maximum front size in the complete tree): %d \n",mumps->id.INFOG(5));CHKERRQ(ierr); 1902a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(6) (number of nodes in the complete tree): %d \n",mumps->id.INFOG(6));CHKERRQ(ierr); 1903a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(7) (ordering option effectively use after analysis): %d \n",mumps->id.INFOG(7));CHKERRQ(ierr); 1904a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(8) (structural symmetry in percent of the permuted matrix after analysis): %d \n",mumps->id.INFOG(8));CHKERRQ(ierr); 1905a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(9) (total real/complex workspace to store the matrix factors after factorization): %d \n",mumps->id.INFOG(9));CHKERRQ(ierr); 1906a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(10) (total integer space store the matrix factors after factorization): %d \n",mumps->id.INFOG(10));CHKERRQ(ierr); 1907a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(11) (order of largest frontal matrix after factorization): %d \n",mumps->id.INFOG(11));CHKERRQ(ierr); 1908a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(12) (number of off-diagonal pivots): %d \n",mumps->id.INFOG(12));CHKERRQ(ierr); 1909a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(13) (number of delayed pivots after factorization): %d \n",mumps->id.INFOG(13));CHKERRQ(ierr); 1910a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(14) (number of memory compress after factorization): %d \n",mumps->id.INFOG(14));CHKERRQ(ierr); 1911a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(15) (number of steps of iterative refinement after solution): %d \n",mumps->id.INFOG(15));CHKERRQ(ierr); 1912a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(16) (estimated size (in MB) of all MUMPS internal data for factorization after analysis: value on the most memory consuming processor): %d \n",mumps->id.INFOG(16));CHKERRQ(ierr); 1913a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(17) (estimated size of all MUMPS internal data for factorization after analysis: sum over all processors): %d \n",mumps->id.INFOG(17));CHKERRQ(ierr); 1914a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(18) (size of all MUMPS internal data allocated during factorization: value on the most memory consuming processor): %d \n",mumps->id.INFOG(18));CHKERRQ(ierr); 1915a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(19) (size of all MUMPS internal data allocated during factorization: sum over all processors): %d \n",mumps->id.INFOG(19));CHKERRQ(ierr); 1916a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(20) (estimated number of entries in the factors): %d \n",mumps->id.INFOG(20));CHKERRQ(ierr); 1917a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(21) (size in MB of memory effectively used during factorization - value on the most memory consuming processor): %d \n",mumps->id.INFOG(21));CHKERRQ(ierr); 1918a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(22) (size in MB of memory effectively used during factorization - sum over all processors): %d \n",mumps->id.INFOG(22));CHKERRQ(ierr); 1919a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(23) (after analysis: value of ICNTL(6) effectively used): %d \n",mumps->id.INFOG(23));CHKERRQ(ierr); 1920a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(24) (after analysis: value of ICNTL(12) effectively used): %d \n",mumps->id.INFOG(24));CHKERRQ(ierr); 1921a5e57a09SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(25) (after factorization: number of pivots modified by static pivoting): %d \n",mumps->id.INFOG(25));CHKERRQ(ierr); 192240d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(28) (after factorization: number of null pivots encountered): %d\n",mumps->id.INFOG(28));CHKERRQ(ierr); 192340d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(29) (after factorization: effective number of entries in the factors (sum over all processors)): %d\n",mumps->id.INFOG(29));CHKERRQ(ierr); 192440d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(30, 31) (after solution: size in Mbytes of memory used during solution phase): %d, %d\n",mumps->id.INFOG(30),mumps->id.INFOG(31));CHKERRQ(ierr); 192540d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(32) (after analysis: type of analysis done): %d\n",mumps->id.INFOG(32));CHKERRQ(ierr); 192640d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(33) (value used for ICNTL(8)): %d\n",mumps->id.INFOG(33));CHKERRQ(ierr); 192740d435e3SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," INFOG(34) (exponent of the determinant if determinant is requested): %d\n",mumps->id.INFOG(34));CHKERRQ(ierr); 1928a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(35) (after factorization: number of entries taking into account BLR factor compression - sum over all processors): %d\n",mumps->id.INFOG(35));CHKERRQ(ierr); 1929a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(36) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(36));CHKERRQ(ierr); 1930a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(37) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - sum over all processors): %d \n",mumps->id.INFOG(37));CHKERRQ(ierr); 1931a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(38) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(38));CHKERRQ(ierr); 1932a0e18203SThibaut Appel ierr = PetscViewerASCIIPrintf(viewer," INFOG(39) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - sum over all processors): %d \n",mumps->id.INFOG(39));CHKERRQ(ierr); 1933f6c57405SHong Zhang } 1934f6c57405SHong Zhang } 1935cb828f0fSHong Zhang } 1936f6c57405SHong Zhang PetscFunctionReturn(0); 1937f6c57405SHong Zhang } 1938f6c57405SHong Zhang 193935bd34faSBarry Smith PetscErrorCode MatGetInfo_MUMPS(Mat A,MatInfoType flag,MatInfo *info) 194035bd34faSBarry Smith { 1941e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)A->data; 194235bd34faSBarry Smith 194335bd34faSBarry Smith PetscFunctionBegin; 194435bd34faSBarry Smith info->block_size = 1.0; 1945cb828f0fSHong Zhang info->nz_allocated = mumps->id.INFOG(20); 1946cb828f0fSHong Zhang info->nz_used = mumps->id.INFOG(20); 194735bd34faSBarry Smith info->nz_unneeded = 0.0; 194835bd34faSBarry Smith info->assemblies = 0.0; 194935bd34faSBarry Smith info->mallocs = 0.0; 195035bd34faSBarry Smith info->memory = 0.0; 195135bd34faSBarry Smith info->fill_ratio_given = 0; 195235bd34faSBarry Smith info->fill_ratio_needed = 0; 195335bd34faSBarry Smith info->factor_mallocs = 0; 195435bd34faSBarry Smith PetscFunctionReturn(0); 195535bd34faSBarry Smith } 195635bd34faSBarry Smith 19575ccb76cbSHong Zhang /* -------------------------------------------------------------------------------------------*/ 19588e7ba810SStefano Zampini PetscErrorCode MatFactorSetSchurIS_MUMPS(Mat F, IS is) 19596444a565SStefano Zampini { 1960e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 1961a3d589ffSStefano Zampini const PetscScalar *arr; 19628e7ba810SStefano Zampini const PetscInt *idxs; 19638e7ba810SStefano Zampini PetscInt size,i; 19646444a565SStefano Zampini PetscErrorCode ierr; 19656444a565SStefano Zampini 19666444a565SStefano Zampini PetscFunctionBegin; 1967b3cb21ddSStefano Zampini ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr); 19682d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 19693ab56b82SJunchao Zhang PetscBool ls,gs; /* gs is false if any rank other than root has non-empty IS */ 1970241dbb5eSStefano Zampini 19713ab56b82SJunchao Zhang ls = mumps->myid ? (size ? PETSC_FALSE : PETSC_TRUE) : PETSC_TRUE; /* always true on root; false on others if their size != 0 */ 19723ab56b82SJunchao Zhang ierr = MPI_Allreduce(&ls,&gs,1,MPIU_BOOL,MPI_LAND,mumps->petsc_comm);CHKERRQ(ierr); 1973241dbb5eSStefano Zampini if (!gs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MUMPS distributed parallel Schur complements not yet supported from PETSc\n"); 1974241dbb5eSStefano Zampini } 1975b3cb21ddSStefano Zampini 1976b3cb21ddSStefano Zampini /* Schur complement matrix */ 1977a3d589ffSStefano Zampini ierr = MatDestroy(&F->schur);CHKERRQ(ierr); 1978a3d589ffSStefano Zampini ierr = MatCreateSeqDense(PETSC_COMM_SELF,size,size,NULL,&F->schur);CHKERRQ(ierr); 1979a3d589ffSStefano Zampini ierr = MatDenseGetArrayRead(F->schur,&arr);CHKERRQ(ierr); 1980a3d589ffSStefano Zampini mumps->id.schur = (MumpsScalar*)arr; 1981a3d589ffSStefano Zampini mumps->id.size_schur = size; 1982a3d589ffSStefano Zampini mumps->id.schur_lld = size; 1983a3d589ffSStefano Zampini ierr = MatDenseRestoreArrayRead(F->schur,&arr);CHKERRQ(ierr); 1984b3cb21ddSStefano Zampini if (mumps->sym == 1) { 1985b3cb21ddSStefano Zampini ierr = MatSetOption(F->schur,MAT_SPD,PETSC_TRUE);CHKERRQ(ierr); 1986b3cb21ddSStefano Zampini } 1987b3cb21ddSStefano Zampini 1988b3cb21ddSStefano Zampini /* MUMPS expects Fortran style indices */ 1989a3d589ffSStefano Zampini ierr = PetscFree(mumps->id.listvar_schur);CHKERRQ(ierr); 1990a3d589ffSStefano Zampini ierr = PetscMalloc1(size,&mumps->id.listvar_schur);CHKERRQ(ierr); 19918e7ba810SStefano Zampini ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr); 1992580bdb30SBarry Smith ierr = PetscArraycpy(mumps->id.listvar_schur,idxs,size);CHKERRQ(ierr); 19938e7ba810SStefano Zampini for (i=0;i<size;i++) mumps->id.listvar_schur[i]++; 19948e7ba810SStefano Zampini ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr); 19952d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 1996241dbb5eSStefano Zampini mumps->id.ICNTL(19) = 1; /* MUMPS returns Schur centralized on the host */ 1997241dbb5eSStefano Zampini } else { 19986444a565SStefano Zampini if (F->factortype == MAT_FACTOR_LU) { 199959ac8732SStefano Zampini mumps->id.ICNTL(19) = 3; /* MUMPS returns full matrix */ 20006444a565SStefano Zampini } else { 200159ac8732SStefano Zampini mumps->id.ICNTL(19) = 2; /* MUMPS returns lower triangular part */ 20026444a565SStefano Zampini } 2003241dbb5eSStefano Zampini } 200459ac8732SStefano Zampini /* set a special value of ICNTL (not handled my MUMPS) to be used in the solve phase by PETSc */ 2005b5fa320bSStefano Zampini mumps->id.ICNTL(26) = -1; 20066444a565SStefano Zampini PetscFunctionReturn(0); 20076444a565SStefano Zampini } 200859ac8732SStefano Zampini 20096444a565SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 20105a05ddb0SStefano Zampini PetscErrorCode MatFactorCreateSchurComplement_MUMPS(Mat F,Mat* S) 20116444a565SStefano Zampini { 20126444a565SStefano Zampini Mat St; 2013e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 20146444a565SStefano Zampini PetscScalar *array; 20156444a565SStefano Zampini #if defined(PETSC_USE_COMPLEX) 20168ac429a0SStefano Zampini PetscScalar im = PetscSqrtScalar((PetscScalar)-1.0); 20176444a565SStefano Zampini #endif 20186444a565SStefano Zampini PetscErrorCode ierr; 20196444a565SStefano Zampini 20206444a565SStefano Zampini PetscFunctionBegin; 20215a05ddb0SStefano Zampini if (!mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it"); 2022241dbb5eSStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,&St);CHKERRQ(ierr); 20236444a565SStefano Zampini ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mumps->id.size_schur,mumps->id.size_schur);CHKERRQ(ierr); 20246444a565SStefano Zampini ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr); 20256444a565SStefano Zampini ierr = MatSetUp(St);CHKERRQ(ierr); 20266444a565SStefano Zampini ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr); 202759ac8732SStefano Zampini if (!mumps->sym) { /* MUMPS always return a full matrix */ 20286444a565SStefano Zampini if (mumps->id.ICNTL(19) == 1) { /* stored by rows */ 20296444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 20306444a565SStefano Zampini for (i=0;i<N;i++) { 20316444a565SStefano Zampini for (j=0;j<N;j++) { 20326444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 20336444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 20346444a565SStefano Zampini #else 20356444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 20366444a565SStefano Zampini #endif 20376444a565SStefano Zampini array[j*N+i] = val; 20386444a565SStefano Zampini } 20396444a565SStefano Zampini } 20406444a565SStefano Zampini } else { /* stored by columns */ 2041580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 20426444a565SStefano Zampini } 20436444a565SStefano Zampini } else { /* either full or lower-triangular (not packed) */ 20446444a565SStefano Zampini if (mumps->id.ICNTL(19) == 2) { /* lower triangular stored by columns */ 20456444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 20466444a565SStefano Zampini for (i=0;i<N;i++) { 20476444a565SStefano Zampini for (j=i;j<N;j++) { 20486444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 20496444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 20506444a565SStefano Zampini #else 20516444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 20526444a565SStefano Zampini #endif 20536444a565SStefano Zampini array[i*N+j] = val; 20546444a565SStefano Zampini array[j*N+i] = val; 20556444a565SStefano Zampini } 20566444a565SStefano Zampini } 20576444a565SStefano Zampini } else if (mumps->id.ICNTL(19) == 3) { /* full matrix */ 2058580bdb30SBarry Smith ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr); 20596444a565SStefano Zampini } else { /* ICNTL(19) == 1 lower triangular stored by rows */ 20606444a565SStefano Zampini PetscInt i,j,N=mumps->id.size_schur; 20616444a565SStefano Zampini for (i=0;i<N;i++) { 20626444a565SStefano Zampini for (j=0;j<i+1;j++) { 20636444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX) 20646444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j]; 20656444a565SStefano Zampini #else 20666444a565SStefano Zampini PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i; 20676444a565SStefano Zampini #endif 20686444a565SStefano Zampini array[i*N+j] = val; 20696444a565SStefano Zampini array[j*N+i] = val; 20706444a565SStefano Zampini } 20716444a565SStefano Zampini } 20726444a565SStefano Zampini } 20736444a565SStefano Zampini } 20746444a565SStefano Zampini ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr); 20756444a565SStefano Zampini *S = St; 20766444a565SStefano Zampini PetscFunctionReturn(0); 20776444a565SStefano Zampini } 20786444a565SStefano Zampini 207959ac8732SStefano Zampini /* -------------------------------------------------------------------------------------------*/ 20805ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt ival) 20815ccb76cbSHong Zhang { 2082e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 20835ccb76cbSHong Zhang 20845ccb76cbSHong Zhang PetscFunctionBegin; 2085a5e57a09SHong Zhang mumps->id.ICNTL(icntl) = ival; 20865ccb76cbSHong Zhang PetscFunctionReturn(0); 20875ccb76cbSHong Zhang } 20885ccb76cbSHong Zhang 2089bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt *ival) 2090bc6112feSHong Zhang { 2091e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2092bc6112feSHong Zhang 2093bc6112feSHong Zhang PetscFunctionBegin; 2094bc6112feSHong Zhang *ival = mumps->id.ICNTL(icntl); 2095bc6112feSHong Zhang PetscFunctionReturn(0); 2096bc6112feSHong Zhang } 2097bc6112feSHong Zhang 20985ccb76cbSHong Zhang /*@ 20995ccb76cbSHong Zhang MatMumpsSetIcntl - Set MUMPS parameter ICNTL() 21005ccb76cbSHong Zhang 21015ccb76cbSHong Zhang Logically Collective on Mat 21025ccb76cbSHong Zhang 21035ccb76cbSHong Zhang Input Parameters: 21045ccb76cbSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 21055ccb76cbSHong Zhang . icntl - index of MUMPS parameter array ICNTL() 21065ccb76cbSHong Zhang - ival - value of MUMPS ICNTL(icntl) 21075ccb76cbSHong Zhang 21085ccb76cbSHong Zhang Options Database: 21095ccb76cbSHong Zhang . -mat_mumps_icntl_<icntl> <ival> 21105ccb76cbSHong Zhang 21115ccb76cbSHong Zhang Level: beginner 21125ccb76cbSHong Zhang 211396a0c994SBarry Smith References: 211496a0c994SBarry Smith . MUMPS Users' Guide 21155ccb76cbSHong Zhang 21169fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 21175ccb76cbSHong Zhang @*/ 21185ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl(Mat F,PetscInt icntl,PetscInt ival) 21195ccb76cbSHong Zhang { 21205ccb76cbSHong Zhang PetscErrorCode ierr; 21215ccb76cbSHong Zhang 21225ccb76cbSHong Zhang PetscFunctionBegin; 21232989dfd4SHong Zhang PetscValidType(F,1); 21242989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 21255ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 21265ccb76cbSHong Zhang PetscValidLogicalCollectiveInt(F,ival,3); 21275ccb76cbSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetIcntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr); 21285ccb76cbSHong Zhang PetscFunctionReturn(0); 21295ccb76cbSHong Zhang } 21305ccb76cbSHong Zhang 2131a21f80fcSHong Zhang /*@ 2132a21f80fcSHong Zhang MatMumpsGetIcntl - Get MUMPS parameter ICNTL() 2133a21f80fcSHong Zhang 2134a21f80fcSHong Zhang Logically Collective on Mat 2135a21f80fcSHong Zhang 2136a21f80fcSHong Zhang Input Parameters: 2137a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2138a21f80fcSHong Zhang - icntl - index of MUMPS parameter array ICNTL() 2139a21f80fcSHong Zhang 2140a21f80fcSHong Zhang Output Parameter: 2141a21f80fcSHong Zhang . ival - value of MUMPS ICNTL(icntl) 2142a21f80fcSHong Zhang 2143a21f80fcSHong Zhang Level: beginner 2144a21f80fcSHong Zhang 214596a0c994SBarry Smith References: 214696a0c994SBarry Smith . MUMPS Users' Guide 2147a21f80fcSHong Zhang 21489fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2149a21f80fcSHong Zhang @*/ 2150bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl(Mat F,PetscInt icntl,PetscInt *ival) 2151bc6112feSHong Zhang { 2152bc6112feSHong Zhang PetscErrorCode ierr; 2153bc6112feSHong Zhang 2154bc6112feSHong Zhang PetscFunctionBegin; 21552989dfd4SHong Zhang PetscValidType(F,1); 21562989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2157bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2158bc6112feSHong Zhang PetscValidIntPointer(ival,3); 21592989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetIcntl_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2160bc6112feSHong Zhang PetscFunctionReturn(0); 2161bc6112feSHong Zhang } 2162bc6112feSHong Zhang 21638928b65cSHong Zhang /* -------------------------------------------------------------------------------------------*/ 21648928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal val) 21658928b65cSHong Zhang { 2166e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 21678928b65cSHong Zhang 21688928b65cSHong Zhang PetscFunctionBegin; 21698928b65cSHong Zhang mumps->id.CNTL(icntl) = val; 21708928b65cSHong Zhang PetscFunctionReturn(0); 21718928b65cSHong Zhang } 21728928b65cSHong Zhang 2173bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal *val) 2174bc6112feSHong Zhang { 2175e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2176bc6112feSHong Zhang 2177bc6112feSHong Zhang PetscFunctionBegin; 2178bc6112feSHong Zhang *val = mumps->id.CNTL(icntl); 2179bc6112feSHong Zhang PetscFunctionReturn(0); 2180bc6112feSHong Zhang } 2181bc6112feSHong Zhang 21828928b65cSHong Zhang /*@ 21838928b65cSHong Zhang MatMumpsSetCntl - Set MUMPS parameter CNTL() 21848928b65cSHong Zhang 21858928b65cSHong Zhang Logically Collective on Mat 21868928b65cSHong Zhang 21878928b65cSHong Zhang Input Parameters: 21888928b65cSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 21898928b65cSHong Zhang . icntl - index of MUMPS parameter array CNTL() 21908928b65cSHong Zhang - val - value of MUMPS CNTL(icntl) 21918928b65cSHong Zhang 21928928b65cSHong Zhang Options Database: 21938928b65cSHong Zhang . -mat_mumps_cntl_<icntl> <val> 21948928b65cSHong Zhang 21958928b65cSHong Zhang Level: beginner 21968928b65cSHong Zhang 219796a0c994SBarry Smith References: 219896a0c994SBarry Smith . MUMPS Users' Guide 21998928b65cSHong Zhang 22009fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 22018928b65cSHong Zhang @*/ 22028928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl(Mat F,PetscInt icntl,PetscReal val) 22038928b65cSHong Zhang { 22048928b65cSHong Zhang PetscErrorCode ierr; 22058928b65cSHong Zhang 22068928b65cSHong Zhang PetscFunctionBegin; 22072989dfd4SHong Zhang PetscValidType(F,1); 22082989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 22098928b65cSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2210bc6112feSHong Zhang PetscValidLogicalCollectiveReal(F,val,3); 22118928b65cSHong Zhang ierr = PetscTryMethod(F,"MatMumpsSetCntl_C",(Mat,PetscInt,PetscReal),(F,icntl,val));CHKERRQ(ierr); 22128928b65cSHong Zhang PetscFunctionReturn(0); 22138928b65cSHong Zhang } 22148928b65cSHong Zhang 2215a21f80fcSHong Zhang /*@ 2216a21f80fcSHong Zhang MatMumpsGetCntl - Get MUMPS parameter CNTL() 2217a21f80fcSHong Zhang 2218a21f80fcSHong Zhang Logically Collective on Mat 2219a21f80fcSHong Zhang 2220a21f80fcSHong Zhang Input Parameters: 2221a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2222a21f80fcSHong Zhang - icntl - index of MUMPS parameter array CNTL() 2223a21f80fcSHong Zhang 2224a21f80fcSHong Zhang Output Parameter: 2225a21f80fcSHong Zhang . val - value of MUMPS CNTL(icntl) 2226a21f80fcSHong Zhang 2227a21f80fcSHong Zhang Level: beginner 2228a21f80fcSHong Zhang 222996a0c994SBarry Smith References: 223096a0c994SBarry Smith . MUMPS Users' Guide 2231a21f80fcSHong Zhang 22329fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2233a21f80fcSHong Zhang @*/ 2234bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl(Mat F,PetscInt icntl,PetscReal *val) 2235bc6112feSHong Zhang { 2236bc6112feSHong Zhang PetscErrorCode ierr; 2237bc6112feSHong Zhang 2238bc6112feSHong Zhang PetscFunctionBegin; 22392989dfd4SHong Zhang PetscValidType(F,1); 22402989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2241bc6112feSHong Zhang PetscValidLogicalCollectiveInt(F,icntl,2); 2242bc6112feSHong Zhang PetscValidRealPointer(val,3); 22432989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetCntl_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2244bc6112feSHong Zhang PetscFunctionReturn(0); 2245bc6112feSHong Zhang } 2246bc6112feSHong Zhang 2247ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo_MUMPS(Mat F,PetscInt icntl,PetscInt *info) 2248bc6112feSHong Zhang { 2249e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2250bc6112feSHong Zhang 2251bc6112feSHong Zhang PetscFunctionBegin; 2252bc6112feSHong Zhang *info = mumps->id.INFO(icntl); 2253bc6112feSHong Zhang PetscFunctionReturn(0); 2254bc6112feSHong Zhang } 2255bc6112feSHong Zhang 2256ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog_MUMPS(Mat F,PetscInt icntl,PetscInt *infog) 2257bc6112feSHong Zhang { 2258e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2259bc6112feSHong Zhang 2260bc6112feSHong Zhang PetscFunctionBegin; 2261bc6112feSHong Zhang *infog = mumps->id.INFOG(icntl); 2262bc6112feSHong Zhang PetscFunctionReturn(0); 2263bc6112feSHong Zhang } 2264bc6112feSHong Zhang 2265ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfo) 2266bc6112feSHong Zhang { 2267e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2268bc6112feSHong Zhang 2269bc6112feSHong Zhang PetscFunctionBegin; 2270bc6112feSHong Zhang *rinfo = mumps->id.RINFO(icntl); 2271bc6112feSHong Zhang PetscFunctionReturn(0); 2272bc6112feSHong Zhang } 2273bc6112feSHong Zhang 2274ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfog) 2275bc6112feSHong Zhang { 2276e69c285eSBarry Smith Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2277bc6112feSHong Zhang 2278bc6112feSHong Zhang PetscFunctionBegin; 2279bc6112feSHong Zhang *rinfog = mumps->id.RINFOG(icntl); 2280bc6112feSHong Zhang PetscFunctionReturn(0); 2281bc6112feSHong Zhang } 2282bc6112feSHong Zhang 228389a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse_MUMPS(Mat F,Mat spRHS) 2284bb599dfdSHong Zhang { 2285bb599dfdSHong Zhang PetscErrorCode ierr; 22860e6b8875SHong Zhang Mat Bt = NULL,Btseq = NULL; 22870e6b8875SHong Zhang PetscBool flg; 2288bb599dfdSHong Zhang Mat_MUMPS *mumps =(Mat_MUMPS*)F->data; 2289bb599dfdSHong Zhang PetscScalar *aa; 2290bb599dfdSHong Zhang PetscInt spnr,*ia,*ja; 2291bb599dfdSHong Zhang 2292bb599dfdSHong Zhang PetscFunctionBegin; 2293e3f2db6aSHong Zhang PetscValidIntPointer(spRHS,2); 22940e6b8875SHong Zhang ierr = PetscObjectTypeCompare((PetscObject)spRHS,MATTRANSPOSEMAT,&flg);CHKERRQ(ierr); 22950e6b8875SHong Zhang if (flg) { 2296bb599dfdSHong Zhang ierr = MatTransposeGetMat(spRHS,&Bt);CHKERRQ(ierr); 22970e6b8875SHong Zhang } else SETERRQ(PetscObjectComm((PetscObject)spRHS),PETSC_ERR_ARG_WRONG,"Matrix spRHS must be type MATTRANSPOSEMAT matrix"); 2298bb599dfdSHong Zhang 2299bb599dfdSHong Zhang ierr = MatMumpsSetIcntl(F,30,1);CHKERRQ(ierr); 2300bb599dfdSHong Zhang 23012d4298aeSJunchao Zhang if (mumps->petsc_size > 1) { 23020e6b8875SHong Zhang Mat_MPIAIJ *b = (Mat_MPIAIJ*)Bt->data; 23030e6b8875SHong Zhang Btseq = b->A; 23040e6b8875SHong Zhang } else { 23050e6b8875SHong Zhang Btseq = Bt; 23060e6b8875SHong Zhang } 23070e6b8875SHong Zhang 2308e3f2db6aSHong Zhang if (!mumps->myid) { 23090e6b8875SHong Zhang ierr = MatSeqAIJGetArray(Btseq,&aa);CHKERRQ(ierr); 23100e6b8875SHong Zhang ierr = MatGetRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 23110e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2312bb599dfdSHong Zhang 2313bb599dfdSHong Zhang mumps->id.irhs_ptr = ia; 2314bb599dfdSHong Zhang mumps->id.irhs_sparse = ja; 2315bb599dfdSHong Zhang mumps->id.nz_rhs = ia[spnr] - 1; 2316bb599dfdSHong Zhang mumps->id.rhs_sparse = (MumpsScalar*)aa; 2317e3f2db6aSHong Zhang } else { 2318e3f2db6aSHong Zhang mumps->id.irhs_ptr = NULL; 2319e3f2db6aSHong Zhang mumps->id.irhs_sparse = NULL; 2320e3f2db6aSHong Zhang mumps->id.nz_rhs = 0; 2321e3f2db6aSHong Zhang mumps->id.rhs_sparse = NULL; 2322e3f2db6aSHong Zhang } 2323bb599dfdSHong Zhang mumps->id.ICNTL(20) = 1; /* rhs is sparse */ 2324e3f2db6aSHong Zhang mumps->id.ICNTL(21) = 0; /* solution is in assembled centralized format */ 2325bb599dfdSHong Zhang 2326bb599dfdSHong Zhang /* solve phase */ 2327bb599dfdSHong Zhang /*-------------*/ 2328bb599dfdSHong Zhang mumps->id.job = JOB_SOLVE; 23293ab56b82SJunchao Zhang PetscMUMPS_c(mumps); 2330e3f2db6aSHong Zhang if (mumps->id.INFOG(1) < 0) 2331e3f2db6aSHong Zhang SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2)); 233214267174SHong Zhang 2333e3f2db6aSHong Zhang if (!mumps->myid) { 23340e6b8875SHong Zhang ierr = MatSeqAIJRestoreArray(Btseq,&aa);CHKERRQ(ierr); 23350e6b8875SHong Zhang ierr = MatRestoreRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr); 23360e6b8875SHong Zhang if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure"); 2337e3f2db6aSHong Zhang } 2338bb599dfdSHong Zhang PetscFunctionReturn(0); 2339bb599dfdSHong Zhang } 2340bb599dfdSHong Zhang 2341bb599dfdSHong Zhang /*@ 234289a9c03aSHong Zhang MatMumpsGetInverse - Get user-specified set of entries in inverse of A 2343bb599dfdSHong Zhang 2344bb599dfdSHong Zhang Logically Collective on Mat 2345bb599dfdSHong Zhang 2346bb599dfdSHong Zhang Input Parameters: 2347bb599dfdSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2348e3f2db6aSHong Zhang - spRHS - sequential sparse matrix in MATTRANSPOSEMAT format holding specified indices in processor[0] 2349bb599dfdSHong Zhang 2350bb599dfdSHong Zhang Output Parameter: 2351e3f2db6aSHong Zhang . spRHS - requested entries of inverse of A 2352bb599dfdSHong Zhang 2353bb599dfdSHong Zhang Level: beginner 2354bb599dfdSHong Zhang 2355bb599dfdSHong Zhang References: 2356bb599dfdSHong Zhang . MUMPS Users' Guide 2357bb599dfdSHong Zhang 2358bb599dfdSHong Zhang .seealso: MatGetFactor(), MatCreateTranspose() 2359bb599dfdSHong Zhang @*/ 236089a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse(Mat F,Mat spRHS) 2361bb599dfdSHong Zhang { 2362bb599dfdSHong Zhang PetscErrorCode ierr; 2363bb599dfdSHong Zhang 2364bb599dfdSHong Zhang PetscFunctionBegin; 2365bb599dfdSHong Zhang PetscValidType(F,1); 2366bb599dfdSHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 236789a9c03aSHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverse_C",(Mat,Mat),(F,spRHS));CHKERRQ(ierr); 2368bb599dfdSHong Zhang PetscFunctionReturn(0); 2369bb599dfdSHong Zhang } 2370bb599dfdSHong Zhang 23710e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose_MUMPS(Mat F,Mat spRHST) 23720e6b8875SHong Zhang { 23730e6b8875SHong Zhang PetscErrorCode ierr; 23740e6b8875SHong Zhang Mat spRHS; 23750e6b8875SHong Zhang 23760e6b8875SHong Zhang PetscFunctionBegin; 23770e6b8875SHong Zhang ierr = MatCreateTranspose(spRHST,&spRHS);CHKERRQ(ierr); 23780e6b8875SHong Zhang ierr = MatMumpsGetInverse_MUMPS(F,spRHS);CHKERRQ(ierr); 23790e6b8875SHong Zhang ierr = MatDestroy(&spRHS);CHKERRQ(ierr); 23800e6b8875SHong Zhang PetscFunctionReturn(0); 23810e6b8875SHong Zhang } 23820e6b8875SHong Zhang 23830e6b8875SHong Zhang /*@ 2384eef1237cSHong Zhang MatMumpsGetInverseTranspose - Get user-specified set of entries in inverse of matrix A^T 23850e6b8875SHong Zhang 23860e6b8875SHong Zhang Logically Collective on Mat 23870e6b8875SHong Zhang 23880e6b8875SHong Zhang Input Parameters: 23890e6b8875SHong Zhang + F - the factored matrix of A obtained by calling MatGetFactor() from PETSc-MUMPS interface 23900e6b8875SHong Zhang - spRHST - sequential sparse matrix in MATAIJ format holding specified indices of A^T in processor[0] 23910e6b8875SHong Zhang 23920e6b8875SHong Zhang Output Parameter: 23930e6b8875SHong Zhang . spRHST - requested entries of inverse of A^T 23940e6b8875SHong Zhang 23950e6b8875SHong Zhang Level: beginner 23960e6b8875SHong Zhang 23970e6b8875SHong Zhang References: 23980e6b8875SHong Zhang . MUMPS Users' Guide 23990e6b8875SHong Zhang 24000e6b8875SHong Zhang .seealso: MatGetFactor(), MatCreateTranspose(), MatMumpsGetInverse() 24010e6b8875SHong Zhang @*/ 24020e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose(Mat F,Mat spRHST) 24030e6b8875SHong Zhang { 24040e6b8875SHong Zhang PetscErrorCode ierr; 24050e6b8875SHong Zhang PetscBool flg; 24060e6b8875SHong Zhang 24070e6b8875SHong Zhang PetscFunctionBegin; 24080e6b8875SHong Zhang PetscValidType(F,1); 24090e6b8875SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 24100e6b8875SHong Zhang ierr = PetscObjectTypeCompareAny((PetscObject)spRHST,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr); 24110e6b8875SHong Zhang if (!flg) SETERRQ(PetscObjectComm((PetscObject)spRHST),PETSC_ERR_ARG_WRONG,"Matrix spRHST must be MATAIJ matrix"); 24120e6b8875SHong Zhang 24130e6b8875SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInverseTranspose_C",(Mat,Mat),(F,spRHST));CHKERRQ(ierr); 24140e6b8875SHong Zhang PetscFunctionReturn(0); 24150e6b8875SHong Zhang } 24160e6b8875SHong Zhang 2417a21f80fcSHong Zhang /*@ 2418a21f80fcSHong Zhang MatMumpsGetInfo - Get MUMPS parameter INFO() 2419a21f80fcSHong Zhang 2420a21f80fcSHong Zhang Logically Collective on Mat 2421a21f80fcSHong Zhang 2422a21f80fcSHong Zhang Input Parameters: 2423a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2424a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFO() 2425a21f80fcSHong Zhang 2426a21f80fcSHong Zhang Output Parameter: 2427a21f80fcSHong Zhang . ival - value of MUMPS INFO(icntl) 2428a21f80fcSHong Zhang 2429a21f80fcSHong Zhang Level: beginner 2430a21f80fcSHong Zhang 243196a0c994SBarry Smith References: 243296a0c994SBarry Smith . MUMPS Users' Guide 2433a21f80fcSHong Zhang 24349fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2435a21f80fcSHong Zhang @*/ 2436ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo(Mat F,PetscInt icntl,PetscInt *ival) 2437bc6112feSHong Zhang { 2438bc6112feSHong Zhang PetscErrorCode ierr; 2439bc6112feSHong Zhang 2440bc6112feSHong Zhang PetscFunctionBegin; 24412989dfd4SHong Zhang PetscValidType(F,1); 24422989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2443ca810319SHong Zhang PetscValidIntPointer(ival,3); 24442989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfo_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2445bc6112feSHong Zhang PetscFunctionReturn(0); 2446bc6112feSHong Zhang } 2447bc6112feSHong Zhang 2448a21f80fcSHong Zhang /*@ 2449a21f80fcSHong Zhang MatMumpsGetInfog - Get MUMPS parameter INFOG() 2450a21f80fcSHong Zhang 2451a21f80fcSHong Zhang Logically Collective on Mat 2452a21f80fcSHong Zhang 2453a21f80fcSHong Zhang Input Parameters: 2454a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2455a21f80fcSHong Zhang - icntl - index of MUMPS parameter array INFOG() 2456a21f80fcSHong Zhang 2457a21f80fcSHong Zhang Output Parameter: 2458a21f80fcSHong Zhang . ival - value of MUMPS INFOG(icntl) 2459a21f80fcSHong Zhang 2460a21f80fcSHong Zhang Level: beginner 2461a21f80fcSHong Zhang 246296a0c994SBarry Smith References: 246396a0c994SBarry Smith . MUMPS Users' Guide 2464a21f80fcSHong Zhang 24659fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2466a21f80fcSHong Zhang @*/ 2467ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog(Mat F,PetscInt icntl,PetscInt *ival) 2468bc6112feSHong Zhang { 2469bc6112feSHong Zhang PetscErrorCode ierr; 2470bc6112feSHong Zhang 2471bc6112feSHong Zhang PetscFunctionBegin; 24722989dfd4SHong Zhang PetscValidType(F,1); 24732989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2474ca810319SHong Zhang PetscValidIntPointer(ival,3); 24752989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetInfog_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr); 2476bc6112feSHong Zhang PetscFunctionReturn(0); 2477bc6112feSHong Zhang } 2478bc6112feSHong Zhang 2479a21f80fcSHong Zhang /*@ 2480a21f80fcSHong Zhang MatMumpsGetRinfo - Get MUMPS parameter RINFO() 2481a21f80fcSHong Zhang 2482a21f80fcSHong Zhang Logically Collective on Mat 2483a21f80fcSHong Zhang 2484a21f80fcSHong Zhang Input Parameters: 2485a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2486a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFO() 2487a21f80fcSHong Zhang 2488a21f80fcSHong Zhang Output Parameter: 2489a21f80fcSHong Zhang . val - value of MUMPS RINFO(icntl) 2490a21f80fcSHong Zhang 2491a21f80fcSHong Zhang Level: beginner 2492a21f80fcSHong Zhang 249396a0c994SBarry Smith References: 249496a0c994SBarry Smith . MUMPS Users' Guide 2495a21f80fcSHong Zhang 24969fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2497a21f80fcSHong Zhang @*/ 2498ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo(Mat F,PetscInt icntl,PetscReal *val) 2499bc6112feSHong Zhang { 2500bc6112feSHong Zhang PetscErrorCode ierr; 2501bc6112feSHong Zhang 2502bc6112feSHong Zhang PetscFunctionBegin; 25032989dfd4SHong Zhang PetscValidType(F,1); 25042989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2505bc6112feSHong Zhang PetscValidRealPointer(val,3); 25062989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfo_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2507bc6112feSHong Zhang PetscFunctionReturn(0); 2508bc6112feSHong Zhang } 2509bc6112feSHong Zhang 2510a21f80fcSHong Zhang /*@ 2511a21f80fcSHong Zhang MatMumpsGetRinfog - Get MUMPS parameter RINFOG() 2512a21f80fcSHong Zhang 2513a21f80fcSHong Zhang Logically Collective on Mat 2514a21f80fcSHong Zhang 2515a21f80fcSHong Zhang Input Parameters: 2516a21f80fcSHong Zhang + F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface 2517a21f80fcSHong Zhang - icntl - index of MUMPS parameter array RINFOG() 2518a21f80fcSHong Zhang 2519a21f80fcSHong Zhang Output Parameter: 2520a21f80fcSHong Zhang . val - value of MUMPS RINFOG(icntl) 2521a21f80fcSHong Zhang 2522a21f80fcSHong Zhang Level: beginner 2523a21f80fcSHong Zhang 252496a0c994SBarry Smith References: 252596a0c994SBarry Smith . MUMPS Users' Guide 2526a21f80fcSHong Zhang 25279fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog() 2528a21f80fcSHong Zhang @*/ 2529ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog(Mat F,PetscInt icntl,PetscReal *val) 2530bc6112feSHong Zhang { 2531bc6112feSHong Zhang PetscErrorCode ierr; 2532bc6112feSHong Zhang 2533bc6112feSHong Zhang PetscFunctionBegin; 25342989dfd4SHong Zhang PetscValidType(F,1); 25352989dfd4SHong Zhang if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix"); 2536bc6112feSHong Zhang PetscValidRealPointer(val,3); 25372989dfd4SHong Zhang ierr = PetscUseMethod(F,"MatMumpsGetRinfog_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr); 2538bc6112feSHong Zhang PetscFunctionReturn(0); 2539bc6112feSHong Zhang } 2540bc6112feSHong Zhang 254124b6179bSKris Buschelman /*MC 25422692d6eeSBarry Smith MATSOLVERMUMPS - A matrix type providing direct solvers (LU and Cholesky) for 254324b6179bSKris Buschelman distributed and sequential matrices via the external package MUMPS. 254424b6179bSKris Buschelman 254541c8de11SBarry Smith Works with MATAIJ and MATSBAIJ matrices 254624b6179bSKris Buschelman 2547c2b89b5dSBarry Smith Use ./configure --download-mumps --download-scalapack --download-parmetis --download-metis --download-ptscotch to have PETSc installed with MUMPS 2548c2b89b5dSBarry Smith 2549217d3b1eSJunchao Zhang Use ./configure --with-openmp --download-hwloc (or --with-hwloc) to enable running MUMPS in MPI+OpenMP hybrid mode and non-MUMPS in flat-MPI mode. See details below. 2550217d3b1eSJunchao Zhang 25513ca39a21SBarry Smith Use -pc_type cholesky or lu -pc_factor_mat_solver_type mumps to use this direct solver 2552c2b89b5dSBarry Smith 255324b6179bSKris Buschelman Options Database Keys: 25544422a9fcSPatrick Sanan + -mat_mumps_icntl_1 - ICNTL(1): output stream for error messages 25554422a9fcSPatrick Sanan . -mat_mumps_icntl_2 - ICNTL(2): output stream for diagnostic printing, statistics, and warning 25564422a9fcSPatrick Sanan . -mat_mumps_icntl_3 - ICNTL(3): output stream for global information, collected on the host 25574422a9fcSPatrick Sanan . -mat_mumps_icntl_4 - ICNTL(4): level of printing (0 to 4) 25584422a9fcSPatrick Sanan . -mat_mumps_icntl_6 - ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7) 25594422a9fcSPatrick Sanan . -mat_mumps_icntl_7 - ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis 25604422a9fcSPatrick Sanan . -mat_mumps_icntl_8 - ICNTL(8): scaling strategy (-2 to 8 or 77) 25614422a9fcSPatrick Sanan . -mat_mumps_icntl_10 - ICNTL(10): max num of refinements 25624422a9fcSPatrick Sanan . -mat_mumps_icntl_11 - ICNTL(11): statistics related to an error analysis (via -ksp_view) 25634422a9fcSPatrick Sanan . -mat_mumps_icntl_12 - ICNTL(12): an ordering strategy for symmetric matrices (0 to 3) 25644422a9fcSPatrick Sanan . -mat_mumps_icntl_13 - ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting 25654422a9fcSPatrick Sanan . -mat_mumps_icntl_14 - ICNTL(14): percentage increase in the estimated working space 25664422a9fcSPatrick Sanan . -mat_mumps_icntl_19 - ICNTL(19): computes the Schur complement 25674422a9fcSPatrick Sanan . -mat_mumps_icntl_22 - ICNTL(22): in-core/out-of-core factorization and solve (0 or 1) 25684422a9fcSPatrick Sanan . -mat_mumps_icntl_23 - ICNTL(23): max size of the working memory (MB) that can allocate per processor 25694422a9fcSPatrick Sanan . -mat_mumps_icntl_24 - ICNTL(24): detection of null pivot rows (0 or 1) 25704422a9fcSPatrick Sanan . -mat_mumps_icntl_25 - ICNTL(25): compute a solution of a deficient matrix and a null space basis 25714422a9fcSPatrick Sanan . -mat_mumps_icntl_26 - ICNTL(26): drives the solution phase if a Schur complement matrix 25724422a9fcSPatrick Sanan . -mat_mumps_icntl_28 - ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering 25734422a9fcSPatrick Sanan . -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis 25744422a9fcSPatrick Sanan . -mat_mumps_icntl_30 - ICNTL(30): compute user-specified set of entries in inv(A) 25754422a9fcSPatrick Sanan . -mat_mumps_icntl_31 - ICNTL(31): indicates which factors may be discarded during factorization 25764422a9fcSPatrick Sanan . -mat_mumps_icntl_33 - ICNTL(33): compute determinant 2577a0e18203SThibaut Appel . -mat_mumps_icntl_35 - ICNTL(35): level of activation of BLR (Block Low-Rank) feature 2578a0e18203SThibaut Appel . -mat_mumps_icntl_36 - ICNTL(36): controls the choice of BLR factorization variant 2579a0e18203SThibaut Appel . -mat_mumps_icntl_38 - ICNTL(38): sets the estimated compression rate of LU factors with BLR 25804422a9fcSPatrick Sanan . -mat_mumps_cntl_1 - CNTL(1): relative pivoting threshold 25814422a9fcSPatrick Sanan . -mat_mumps_cntl_2 - CNTL(2): stopping criterion of refinement 25824422a9fcSPatrick Sanan . -mat_mumps_cntl_3 - CNTL(3): absolute pivoting threshold 25834422a9fcSPatrick Sanan . -mat_mumps_cntl_4 - CNTL(4): value for static pivoting 2584217d3b1eSJunchao Zhang . -mat_mumps_cntl_5 - CNTL(5): fixation for null pivots 2585a0e18203SThibaut Appel . -mat_mumps_cntl_7 - CNTL(7): precision of the dropping parameter used during BLR factorization 2586217d3b1eSJunchao Zhang - -mat_mumps_use_omp_threads [m] - run MUMPS in MPI+OpenMP hybrid mode as if omp_set_num_threads(m) is called before calling MUMPS. 2587217d3b1eSJunchao Zhang Default might be the number of cores per CPU package (socket) as reported by hwloc and suggested by the MUMPS manual. 258824b6179bSKris Buschelman 258924b6179bSKris Buschelman Level: beginner 259024b6179bSKris Buschelman 259195452b02SPatrick Sanan Notes: 259238548759SBarry Smith MUMPS Cholesky does not handle (complex) Hermitian matrices http://mumps.enseeiht.fr/doc/userguide_5.2.1.pdf so using it will error if the matrix is Hermitian. 259338548759SBarry Smith 2594c0decd05SBarry Smith When a MUMPS factorization fails inside a KSP solve, for example with a KSP_DIVERGED_PC_FAILED, one can find the MUMPS information about the failure by calling 25959fc87aa7SBarry Smith $ KSPGetPC(ksp,&pc); 25969fc87aa7SBarry Smith $ PCFactorGetMatrix(pc,&mat); 25979fc87aa7SBarry Smith $ MatMumpsGetInfo(mat,....); 25989fc87aa7SBarry Smith $ MatMumpsGetInfog(mat,....); etc. 25999fc87aa7SBarry Smith Or you can run with -ksp_error_if_not_converged and the program will be stopped and the information printed in the error message. 26009fc87aa7SBarry Smith 26018fcaa860SBarry Smith Two modes to run MUMPS/PETSc with OpenMP 26028fcaa860SBarry Smith 26038fcaa860SBarry Smith $ Set OMP_NUM_THREADS and run with fewer MPI ranks than cores. For example, if you want to have 16 OpenMP 26048fcaa860SBarry Smith $ threads per rank, then you may use "export OMP_NUM_THREADS=16 && mpirun -n 4 ./test". 26058fcaa860SBarry Smith 26068fcaa860SBarry Smith $ -mat_mumps_use_omp_threads [m] and run your code with as many MPI ranks as the number of cores. For example, 26078fcaa860SBarry Smith $ if a compute node has 32 cores and you run on two nodes, you may use "mpirun -n 64 ./test -mat_mumps_use_omp_threads 16" 26088fcaa860SBarry Smith 26098fcaa860SBarry Smith To run MUMPS in MPI+OpenMP hybrid mode (i.e., enable multithreading in MUMPS), but still run the non-MUMPS part 2610217d3b1eSJunchao Zhang (i.e., PETSc part) of your code in the so-called flat-MPI (aka pure-MPI) mode, you need to configure PETSc with --with-openmp --download-hwloc 2611217d3b1eSJunchao Zhang (or --with-hwloc), and have an MPI that supports MPI-3.0's process shared memory (which is usually available). Since MUMPS calls BLAS 26128fcaa860SBarry Smith libraries, to really get performance, you should have multithreaded BLAS libraries such as Intel MKL, AMD ACML, Cray libSci or OpenBLAS 26138fcaa860SBarry Smith (PETSc will automatically try to utilized a threaded BLAS if --with-openmp is provided). 2614217d3b1eSJunchao Zhang 26158fcaa860SBarry Smith If you run your code through a job submission system, there are caveats in MPI rank mapping. We use MPI_Comm_split_type() to obtain MPI 2616217d3b1eSJunchao Zhang processes on each compute node. Listing the processes in rank ascending order, we split processes on a node into consecutive groups of 2617217d3b1eSJunchao Zhang size m and create a communicator called omp_comm for each group. Rank 0 in an omp_comm is called the master rank, and others in the omp_comm 2618217d3b1eSJunchao Zhang are called slave ranks (or slaves). Only master ranks are seen to MUMPS and slaves are not. We will free CPUs assigned to slaves (might be set 2619217d3b1eSJunchao Zhang by CPU binding policies in job scripts) and make the CPUs available to the master so that OMP threads spawned by MUMPS can run on the CPUs. 2620217d3b1eSJunchao Zhang In a multi-socket compute node, MPI rank mapping is an issue. Still use the above example and suppose your compute node has two sockets, 2621217d3b1eSJunchao Zhang if you interleave MPI ranks on the two sockets, in other words, even ranks are placed on socket 0, and odd ranks are on socket 1, and bind 2622217d3b1eSJunchao Zhang MPI ranks to cores, then with -mat_mumps_use_omp_threads 16, a master rank (and threads it spawns) will use half cores in socket 0, and half 2623217d3b1eSJunchao Zhang cores in socket 1, that definitely hurts locality. On the other hand, if you map MPI ranks consecutively on the two sockets, then the 2624217d3b1eSJunchao Zhang problem will not happen. Therefore, when you use -mat_mumps_use_omp_threads, you need to keep an eye on your MPI rank mapping and CPU binding. 26258fcaa860SBarry Smith For example, with the Slurm job scheduler, one can use srun --cpu-bind=verbose -m block:block to map consecutive MPI ranks to sockets and 2626217d3b1eSJunchao Zhang examine the mapping result. 2627217d3b1eSJunchao Zhang 2628217d3b1eSJunchao Zhang PETSc does not control thread binding in MUMPS. So to get best performance, one still has to set OMP_PROC_BIND and OMP_PLACES in job scripts, 2629217d3b1eSJunchao Zhang for example, export OMP_PLACES=threads and export OMP_PROC_BIND=spread. One does not need to export OMP_NUM_THREADS=m in job scripts as PETSc 2630217d3b1eSJunchao Zhang calls omp_set_num_threads(m) internally before calling MUMPS. 2631217d3b1eSJunchao Zhang 2632217d3b1eSJunchao Zhang References: 2633217d3b1eSJunchao Zhang + 1. - Heroux, Michael A., R. Brightwell, and Michael M. Wolf. "Bi-modal MPI and MPI+ threads computing on scalable multicore systems." IJHPCA (Submitted) (2011). 2634217d3b1eSJunchao Zhang - 2. - Gutierrez, Samuel K., et al. "Accommodating Thread-Level Heterogeneity in Coupled Parallel Applications." Parallel and Distributed Processing Symposium (IPDPS), 2017 IEEE International. IEEE, 2017. 2635217d3b1eSJunchao Zhang 26363ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog(), KSPGetPC(), PCGetFactor(), PCFactorGetMatrix() 263741c8de11SBarry Smith 263824b6179bSKris Buschelman M*/ 263924b6179bSKris Buschelman 2640ea799195SBarry Smith static PetscErrorCode MatFactorGetSolverType_mumps(Mat A,MatSolverType *type) 264135bd34faSBarry Smith { 264235bd34faSBarry Smith PetscFunctionBegin; 26432692d6eeSBarry Smith *type = MATSOLVERMUMPS; 264435bd34faSBarry Smith PetscFunctionReturn(0); 264535bd34faSBarry Smith } 264635bd34faSBarry Smith 2647bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI AIJ matrices */ 2648cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_aij_mumps(Mat A,MatFactorType ftype,Mat *F) 26492877fffaSHong Zhang { 26502877fffaSHong Zhang Mat B; 26512877fffaSHong Zhang PetscErrorCode ierr; 26522877fffaSHong Zhang Mat_MUMPS *mumps; 2653ace3abfcSBarry Smith PetscBool isSeqAIJ; 26542877fffaSHong Zhang 26552877fffaSHong Zhang PetscFunctionBegin; 26562877fffaSHong Zhang /* Create the factorization matrix */ 2657a3d589ffSStefano Zampini ierr = PetscObjectBaseTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr); 2658ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 26592877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2660e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2661e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 26622877fffaSHong Zhang 2663b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 26642205254eSKarl Rupp 26652877fffaSHong Zhang B->ops->view = MatView_MUMPS; 266635bd34faSBarry Smith B->ops->getinfo = MatGetInfo_MUMPS; 26672205254eSKarl Rupp 26683ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 26695a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 26705a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2671bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2672bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2673bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2674bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2675ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2676ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2677ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2678ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 267989a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 26800e6b8875SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 26816444a565SStefano Zampini 2682450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2683450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 2684d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 2685bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqaij; 2686bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpiaij; 2687746480a1SHong Zhang mumps->sym = 0; 2688dcd589f8SShri Abhyankar } else { 268967877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2690450b117fSShri Abhyankar B->factortype = MAT_FACTOR_CHOLESKY; 2691bccb9932SShri Abhyankar if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqsbaij; 2692bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpisbaij; 269359ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 269459ac8732SStefano Zampini mumps->sym = 2; 269559ac8732SStefano Zampini #else 26966fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 26976fdc2a6dSBarry Smith else mumps->sym = 2; 269859ac8732SStefano Zampini #endif 2699450b117fSShri Abhyankar } 27002877fffaSHong Zhang 270100c67f3bSHong Zhang /* set solvertype */ 270200c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 270300c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 270400c67f3bSHong Zhang 27052877fffaSHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2706e69c285eSBarry Smith B->data = (void*)mumps; 27072205254eSKarl Rupp 2708f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2709746480a1SHong Zhang 27102877fffaSHong Zhang *F = B; 27112877fffaSHong Zhang PetscFunctionReturn(0); 27122877fffaSHong Zhang } 27132877fffaSHong Zhang 2714bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI SBAIJ matrices */ 2715cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_sbaij_mumps(Mat A,MatFactorType ftype,Mat *F) 27162877fffaSHong Zhang { 27172877fffaSHong Zhang Mat B; 27182877fffaSHong Zhang PetscErrorCode ierr; 27192877fffaSHong Zhang Mat_MUMPS *mumps; 2720ace3abfcSBarry Smith PetscBool isSeqSBAIJ; 27212877fffaSHong Zhang 27222877fffaSHong Zhang PetscFunctionBegin; 2723ce94432eSBarry Smith if (ftype != MAT_FACTOR_CHOLESKY) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with MUMPS LU, use AIJ matrix"); 2724251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr); 27252877fffaSHong Zhang /* Create the factorization matrix */ 2726ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 27272877fffaSHong Zhang ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2728e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2729e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2730e69c285eSBarry Smith 2731b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2732bccb9932SShri Abhyankar if (isSeqSBAIJ) { 273316ebf90aSShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_seqsbaij_seqsbaij; 2734dcd589f8SShri Abhyankar } else { 2735bccb9932SShri Abhyankar mumps->ConvertToTriples = MatConvertToTriples_mpisbaij_mpisbaij; 2736bccb9932SShri Abhyankar } 2737bccb9932SShri Abhyankar 2738e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 273967877ebaSShri Abhyankar B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS; 2740bccb9932SShri Abhyankar B->ops->view = MatView_MUMPS; 27412205254eSKarl Rupp 27423ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 27435a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 27445a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2745b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2746b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2747b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2748b13644aeSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2749ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2750ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2751ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2752ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 275389a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2754eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 27552205254eSKarl Rupp 2756f4762488SHong Zhang B->factortype = MAT_FACTOR_CHOLESKY; 275759ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX) 275859ac8732SStefano Zampini mumps->sym = 2; 275959ac8732SStefano Zampini #else 27606fdc2a6dSBarry Smith if (A->spd_set && A->spd) mumps->sym = 1; 27616fdc2a6dSBarry Smith else mumps->sym = 2; 276259ac8732SStefano Zampini #endif 2763a214ac2aSShri Abhyankar 276400c67f3bSHong Zhang /* set solvertype */ 276500c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 276600c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 276700c67f3bSHong Zhang 2768f3c0ef26SHong Zhang B->ops->destroy = MatDestroy_MUMPS; 2769e69c285eSBarry Smith B->data = (void*)mumps; 27702205254eSKarl Rupp 2771f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2772746480a1SHong Zhang 27732877fffaSHong Zhang *F = B; 27742877fffaSHong Zhang PetscFunctionReturn(0); 27752877fffaSHong Zhang } 277697969023SHong Zhang 2777cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_baij_mumps(Mat A,MatFactorType ftype,Mat *F) 277867877ebaSShri Abhyankar { 277967877ebaSShri Abhyankar Mat B; 278067877ebaSShri Abhyankar PetscErrorCode ierr; 278167877ebaSShri Abhyankar Mat_MUMPS *mumps; 2782ace3abfcSBarry Smith PetscBool isSeqBAIJ; 278367877ebaSShri Abhyankar 278467877ebaSShri Abhyankar PetscFunctionBegin; 278567877ebaSShri Abhyankar /* Create the factorization matrix */ 2786251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr); 2787ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 278867877ebaSShri Abhyankar ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 2789e69c285eSBarry Smith ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 2790e69c285eSBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 2791450b117fSShri Abhyankar 2792b00a9115SJed Brown ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 2793450b117fSShri Abhyankar if (ftype == MAT_FACTOR_LU) { 2794450b117fSShri Abhyankar B->ops->lufactorsymbolic = MatLUFactorSymbolic_BAIJMUMPS; 2795450b117fSShri Abhyankar B->factortype = MAT_FACTOR_LU; 2796bccb9932SShri Abhyankar if (isSeqBAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqbaij_seqaij; 2797bccb9932SShri Abhyankar else mumps->ConvertToTriples = MatConvertToTriples_mpibaij_mpiaij; 2798746480a1SHong Zhang mumps->sym = 0; 2799f23aa3ddSBarry Smith } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc BAIJ matrices with MUMPS Cholesky, use SBAIJ or AIJ matrix instead\n"); 2800bccb9932SShri Abhyankar 2801e69c285eSBarry Smith B->ops->getinfo = MatGetInfo_External; 2802450b117fSShri Abhyankar B->ops->view = MatView_MUMPS; 28032205254eSKarl Rupp 28043ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 28055a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 28065a05ddb0SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 2807bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 2808bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 2809bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 2810bc6112feSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 2811ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 2812ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 2813ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 2814ca810319SHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 281589a9c03aSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr); 2816eef1237cSHong Zhang ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr); 2817450b117fSShri Abhyankar 281800c67f3bSHong Zhang /* set solvertype */ 281900c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 282000c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 282100c67f3bSHong Zhang 28227ee00b23SStefano Zampini B->ops->destroy = MatDestroy_MUMPS; 28237ee00b23SStefano Zampini B->data = (void*)mumps; 28247ee00b23SStefano Zampini 28257ee00b23SStefano Zampini ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 28267ee00b23SStefano Zampini 28277ee00b23SStefano Zampini *F = B; 28287ee00b23SStefano Zampini PetscFunctionReturn(0); 28297ee00b23SStefano Zampini } 28307ee00b23SStefano Zampini 28317ee00b23SStefano Zampini /* MatGetFactor for Seq and MPI SELL matrices */ 28327ee00b23SStefano Zampini static PetscErrorCode MatGetFactor_sell_mumps(Mat A,MatFactorType ftype,Mat *F) 28337ee00b23SStefano Zampini { 28347ee00b23SStefano Zampini Mat B; 28357ee00b23SStefano Zampini PetscErrorCode ierr; 28367ee00b23SStefano Zampini Mat_MUMPS *mumps; 28377ee00b23SStefano Zampini PetscBool isSeqSELL; 28387ee00b23SStefano Zampini 28397ee00b23SStefano Zampini PetscFunctionBegin; 28407ee00b23SStefano Zampini /* Create the factorization matrix */ 28417ee00b23SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSELL,&isSeqSELL);CHKERRQ(ierr); 28427ee00b23SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 28437ee00b23SStefano Zampini ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 28447ee00b23SStefano Zampini ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr); 28457ee00b23SStefano Zampini ierr = MatSetUp(B);CHKERRQ(ierr); 28467ee00b23SStefano Zampini 28477ee00b23SStefano Zampini ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr); 28487ee00b23SStefano Zampini 28497ee00b23SStefano Zampini B->ops->view = MatView_MUMPS; 28507ee00b23SStefano Zampini B->ops->getinfo = MatGetInfo_MUMPS; 28517ee00b23SStefano Zampini 28527ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr); 28537ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr); 28547ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr); 28557ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr); 28567ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr); 28577ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr); 28587ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr); 28597ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr); 28607ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr); 28617ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr); 28627ee00b23SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr); 28637ee00b23SStefano Zampini 28647ee00b23SStefano Zampini if (ftype == MAT_FACTOR_LU) { 28657ee00b23SStefano Zampini B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS; 28667ee00b23SStefano Zampini B->factortype = MAT_FACTOR_LU; 28677ee00b23SStefano Zampini if (isSeqSELL) mumps->ConvertToTriples = MatConvertToTriples_seqsell_seqaij; 28687ee00b23SStefano Zampini else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 28697ee00b23SStefano Zampini mumps->sym = 0; 28707ee00b23SStefano Zampini } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented"); 28717ee00b23SStefano Zampini 28727ee00b23SStefano Zampini /* set solvertype */ 28737ee00b23SStefano Zampini ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 28747ee00b23SStefano Zampini ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr); 28757ee00b23SStefano Zampini 2876450b117fSShri Abhyankar B->ops->destroy = MatDestroy_MUMPS; 2877e69c285eSBarry Smith B->data = (void*)mumps; 28782205254eSKarl Rupp 2879f697e70eSHong Zhang ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr); 2880746480a1SHong Zhang 2881450b117fSShri Abhyankar *F = B; 2882450b117fSShri Abhyankar PetscFunctionReturn(0); 2883450b117fSShri Abhyankar } 288442c9c57cSBarry Smith 28853ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_MUMPS(void) 288642c9c57cSBarry Smith { 288742c9c57cSBarry Smith PetscErrorCode ierr; 288842c9c57cSBarry Smith 288942c9c57cSBarry Smith PetscFunctionBegin; 28903ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28913ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28923ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28933ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28943ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPISBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 28953ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28963ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr); 28973ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28983ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr); 28993ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr); 29007ee00b23SStefano Zampini ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSELL,MAT_FACTOR_LU,MatGetFactor_sell_mumps);CHKERRQ(ierr); 290142c9c57cSBarry Smith PetscFunctionReturn(0); 290242c9c57cSBarry Smith } 290342c9c57cSBarry Smith 2904