xref: /petsc/src/mat/impls/aij/mpi/mumps/mumps.c (revision ec4f40fd36cac85945928acca3e625f8e6c4f8a0)
11c2a3de1SBarry Smith 
2397b6df1SKris Buschelman /*
3c2b5dc30SHong Zhang     Provides an interface to the MUMPS sparse solver
4397b6df1SKris Buschelman */
551d5961aSHong Zhang 
6c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> /*I  "petscmat.h"  I*/
7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h>
87ee00b23SStefano Zampini #include <../src/mat/impls/sell/mpi/mpisell.h>
9397b6df1SKris Buschelman 
10397b6df1SKris Buschelman EXTERN_C_BEGIN
11397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX)
122907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE)
132907cef9SHong Zhang #include <cmumps_c.h>
142907cef9SHong Zhang #else
15c6db04a5SJed Brown #include <zmumps_c.h>
162907cef9SHong Zhang #endif
172907cef9SHong Zhang #else
182907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE)
192907cef9SHong Zhang #include <smumps_c.h>
20397b6df1SKris Buschelman #else
21c6db04a5SJed Brown #include <dmumps_c.h>
22397b6df1SKris Buschelman #endif
232907cef9SHong Zhang #endif
24397b6df1SKris Buschelman EXTERN_C_END
25397b6df1SKris Buschelman #define JOB_INIT -1
263d472b54SHong Zhang #define JOB_FACTSYMBOLIC 1
273d472b54SHong Zhang #define JOB_FACTNUMERIC 2
283d472b54SHong Zhang #define JOB_SOLVE 3
29397b6df1SKris Buschelman #define JOB_END -2
303d472b54SHong Zhang 
312907cef9SHong Zhang /* calls to MUMPS */
322907cef9SHong Zhang #if defined(PETSC_USE_COMPLEX)
332907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE)
343ab56b82SJunchao Zhang #define MUMPS_c cmumps_c
352907cef9SHong Zhang #else
363ab56b82SJunchao Zhang #define MUMPS_c zmumps_c
372907cef9SHong Zhang #endif
382907cef9SHong Zhang #else
392907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE)
403ab56b82SJunchao Zhang #define MUMPS_c smumps_c
412907cef9SHong Zhang #else
423ab56b82SJunchao Zhang #define MUMPS_c dmumps_c
432907cef9SHong Zhang #endif
442907cef9SHong Zhang #endif
452907cef9SHong Zhang 
46217d3b1eSJunchao Zhang /* if using PETSc OpenMP support, we only call MUMPS on master ranks. Before/after the call, we change/restore CPUs the master ranks can run on */
473ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT)
483ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \
493ab56b82SJunchao Zhang   do { \
503ab56b82SJunchao Zhang     if (mumps->use_petsc_omp_support) { \
513ab56b82SJunchao Zhang       if (mumps->is_omp_master) { \
523ab56b82SJunchao Zhang         ierr = PetscOmpCtrlOmpRegionOnMasterBegin(mumps->omp_ctrl);CHKERRQ(ierr); \
533ab56b82SJunchao Zhang         MUMPS_c(&mumps->id); \
543ab56b82SJunchao Zhang         ierr = PetscOmpCtrlOmpRegionOnMasterEnd(mumps->omp_ctrl);CHKERRQ(ierr); \
553ab56b82SJunchao Zhang       } \
563ab56b82SJunchao Zhang       ierr = PetscOmpCtrlBarrier(mumps->omp_ctrl);CHKERRQ(ierr); \
573ab56b82SJunchao Zhang     } else { \
583ab56b82SJunchao Zhang       MUMPS_c(&mumps->id); \
593ab56b82SJunchao Zhang     } \
603ab56b82SJunchao Zhang   } while(0)
613ab56b82SJunchao Zhang #else
623ab56b82SJunchao Zhang #define PetscMUMPS_c(mumps) \
633ab56b82SJunchao Zhang   do { MUMPS_c(&mumps->id); } while (0)
643ab56b82SJunchao Zhang #endif
653ab56b82SJunchao Zhang 
66940cd9d6SSatish Balay /* declare MumpsScalar */
67940cd9d6SSatish Balay #if defined(PETSC_USE_COMPLEX)
68940cd9d6SSatish Balay #if defined(PETSC_USE_REAL_SINGLE)
69940cd9d6SSatish Balay #define MumpsScalar mumps_complex
70940cd9d6SSatish Balay #else
71940cd9d6SSatish Balay #define MumpsScalar mumps_double_complex
72940cd9d6SSatish Balay #endif
73940cd9d6SSatish Balay #else
74940cd9d6SSatish Balay #define MumpsScalar PetscScalar
75940cd9d6SSatish Balay #endif
763d472b54SHong Zhang 
77397b6df1SKris Buschelman /* macros s.t. indices match MUMPS documentation */
78397b6df1SKris Buschelman #define ICNTL(I) icntl[(I)-1]
79397b6df1SKris Buschelman #define CNTL(I) cntl[(I)-1]
80397b6df1SKris Buschelman #define INFOG(I) infog[(I)-1]
81a7aca84bSHong Zhang #define INFO(I) info[(I)-1]
82397b6df1SKris Buschelman #define RINFOG(I) rinfog[(I)-1]
83adc1d99fSHong Zhang #define RINFO(I) rinfo[(I)-1]
84397b6df1SKris Buschelman 
85397b6df1SKris Buschelman typedef struct {
86397b6df1SKris Buschelman #if defined(PETSC_USE_COMPLEX)
872907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE)
882907cef9SHong Zhang   CMUMPS_STRUC_C id;
892907cef9SHong Zhang #else
90397b6df1SKris Buschelman   ZMUMPS_STRUC_C id;
912907cef9SHong Zhang #endif
922907cef9SHong Zhang #else
932907cef9SHong Zhang #if defined(PETSC_USE_REAL_SINGLE)
942907cef9SHong Zhang   SMUMPS_STRUC_C id;
95397b6df1SKris Buschelman #else
96397b6df1SKris Buschelman   DMUMPS_STRUC_C id;
97397b6df1SKris Buschelman #endif
982907cef9SHong Zhang #endif
992907cef9SHong Zhang 
100397b6df1SKris Buschelman   MatStructure matstruc;
1012d4298aeSJunchao Zhang   PetscMPIInt  myid,petsc_size;
102a5e57a09SHong Zhang   PetscInt     *irn,*jcn,nz,sym;
103397b6df1SKris Buschelman   PetscScalar  *val;
1042d4298aeSJunchao Zhang   MPI_Comm     mumps_comm;
105a5e57a09SHong Zhang   PetscInt     ICNTL9_pre;           /* check if ICNTL(9) is changed from previous MatSolve */
106801fbe65SHong Zhang   VecScatter   scat_rhs, scat_sol;   /* used by MatSolve() */
107801fbe65SHong Zhang   Vec          b_seq,x_seq;
108b34f08ffSHong Zhang   PetscInt     ninfo,*info;          /* display INFO */
109b5fa320bSStefano Zampini   PetscInt     sizeredrhs;
11059ac8732SStefano Zampini   PetscScalar  *schur_sol;
11159ac8732SStefano Zampini   PetscInt     schur_sizesol;
1122205254eSKarl Rupp 
1133ab56b82SJunchao Zhang   PetscBool    use_petsc_omp_support;
1143ab56b82SJunchao Zhang   PetscOmpCtrl omp_ctrl;             /* an OpenMP controler that blocked processes will release their CPU (MPI_Barrier does not have this guarantee) */
1153ab56b82SJunchao Zhang   MPI_Comm     petsc_comm,omp_comm;  /* petsc_comm is petsc matrix's comm */
1163ab56b82SJunchao Zhang   PetscMPIInt  mpinz;                /* on master rank, nz = sum(mpinz) over omp_comm; on other ranks, mpinz = nz*/
1173ab56b82SJunchao Zhang   PetscMPIInt  omp_comm_size;
1183ab56b82SJunchao Zhang   PetscBool    is_omp_master;        /* is this rank the master of omp_comm */
1193ab56b82SJunchao Zhang   PetscMPIInt  *recvcount,*displs;
1203ab56b82SJunchao Zhang 
121bccb9932SShri Abhyankar   PetscErrorCode (*ConvertToTriples)(Mat, int, MatReuse, int*, int**, int**, PetscScalar**);
122f0c56d0fSKris Buschelman } Mat_MUMPS;
123f0c56d0fSKris Buschelman 
12409573ac7SBarry Smith extern PetscErrorCode MatDuplicate_MUMPS(Mat,MatDuplicateOption,Mat*);
125b24902e0SBarry Smith 
12659ac8732SStefano Zampini static PetscErrorCode MatMumpsResetSchur_Private(Mat_MUMPS* mumps)
127b5fa320bSStefano Zampini {
128b5fa320bSStefano Zampini   PetscErrorCode ierr;
129b5fa320bSStefano Zampini 
130b5fa320bSStefano Zampini   PetscFunctionBegin;
13159ac8732SStefano Zampini   ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr);
13259ac8732SStefano Zampini   ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr);
13359ac8732SStefano Zampini   ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr);
13459ac8732SStefano Zampini   mumps->id.size_schur = 0;
135b3cb21ddSStefano Zampini   mumps->id.schur_lld  = 0;
13659ac8732SStefano Zampini   mumps->id.ICNTL(19)  = 0;
13759ac8732SStefano Zampini   PetscFunctionReturn(0);
13859ac8732SStefano Zampini }
13959ac8732SStefano Zampini 
140b3cb21ddSStefano Zampini /* solve with rhs in mumps->id.redrhs and return in the same location */
141b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsSolveSchur_Private(Mat F)
14259ac8732SStefano Zampini {
143b3cb21ddSStefano Zampini   Mat_MUMPS            *mumps=(Mat_MUMPS*)F->data;
144b3cb21ddSStefano Zampini   Mat                  S,B,X;
145b3cb21ddSStefano Zampini   MatFactorSchurStatus schurstatus;
146b3cb21ddSStefano Zampini   PetscInt             sizesol;
14759ac8732SStefano Zampini   PetscErrorCode       ierr;
14859ac8732SStefano Zampini 
14959ac8732SStefano Zampini   PetscFunctionBegin;
150b3cb21ddSStefano Zampini   ierr = MatFactorFactorizeSchurComplement(F);CHKERRQ(ierr);
151b3cb21ddSStefano Zampini   ierr = MatFactorGetSchurComplement(F,&S,&schurstatus);CHKERRQ(ierr);
152b3cb21ddSStefano Zampini   ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&B);CHKERRQ(ierr);
153b3cb21ddSStefano Zampini   switch (schurstatus) {
154b3cb21ddSStefano Zampini   case MAT_FACTOR_SCHUR_FACTORED:
155b3cb21ddSStefano Zampini     ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,(PetscScalar*)mumps->id.redrhs,&X);CHKERRQ(ierr);
156b3cb21ddSStefano Zampini     if (!mumps->id.ICNTL(9)) { /* transpose solve */
157b3cb21ddSStefano Zampini       ierr = MatMatSolveTranspose(S,B,X);CHKERRQ(ierr);
15859ac8732SStefano Zampini     } else {
159b3cb21ddSStefano Zampini       ierr = MatMatSolve(S,B,X);CHKERRQ(ierr);
16059ac8732SStefano Zampini     }
161b3cb21ddSStefano Zampini     break;
162b3cb21ddSStefano Zampini   case MAT_FACTOR_SCHUR_INVERTED:
163b3cb21ddSStefano Zampini     sizesol = mumps->id.nrhs*mumps->id.size_schur;
16459ac8732SStefano Zampini     if (!mumps->schur_sol || sizesol > mumps->schur_sizesol) {
16559ac8732SStefano Zampini       ierr = PetscFree(mumps->schur_sol);CHKERRQ(ierr);
16659ac8732SStefano Zampini       ierr = PetscMalloc1(sizesol,&mumps->schur_sol);CHKERRQ(ierr);
16759ac8732SStefano Zampini       mumps->schur_sizesol = sizesol;
168b5fa320bSStefano Zampini     }
169b3cb21ddSStefano Zampini     ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.nrhs,mumps->schur_sol,&X);CHKERRQ(ierr);
17059ac8732SStefano Zampini     if (!mumps->id.ICNTL(9)) { /* transpose solve */
171b3cb21ddSStefano Zampini       ierr = MatTransposeMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr);
172b5fa320bSStefano Zampini     } else {
173b3cb21ddSStefano Zampini       ierr = MatMatMult(S,B,MAT_REUSE_MATRIX,PETSC_DEFAULT,&X);CHKERRQ(ierr);
174b5fa320bSStefano Zampini     }
175b3cb21ddSStefano Zampini     ierr = MatCopy(X,B,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
176b3cb21ddSStefano Zampini     break;
177b3cb21ddSStefano Zampini   default:
178b3cb21ddSStefano Zampini     SETERRQ1(PetscObjectComm((PetscObject)F),PETSC_ERR_SUP,"Unhandled MatFactorSchurStatus %D",F->schur_status);
179b3cb21ddSStefano Zampini     break;
18059ac8732SStefano Zampini   }
181b3cb21ddSStefano Zampini   ierr = MatFactorRestoreSchurComplement(F,&S,schurstatus);CHKERRQ(ierr);
182b3cb21ddSStefano Zampini   ierr = MatDestroy(&B);CHKERRQ(ierr);
183b3cb21ddSStefano Zampini   ierr = MatDestroy(&X);CHKERRQ(ierr);
184b5fa320bSStefano Zampini   PetscFunctionReturn(0);
185b5fa320bSStefano Zampini }
186b5fa320bSStefano Zampini 
187b3cb21ddSStefano Zampini static PetscErrorCode MatMumpsHandleSchur_Private(Mat F, PetscBool expansion)
188b5fa320bSStefano Zampini {
189b3cb21ddSStefano Zampini   Mat_MUMPS     *mumps=(Mat_MUMPS*)F->data;
190b5fa320bSStefano Zampini   PetscErrorCode ierr;
191b5fa320bSStefano Zampini 
192b5fa320bSStefano Zampini   PetscFunctionBegin;
193b5fa320bSStefano Zampini   if (!mumps->id.ICNTL(19)) { /* do nothing when Schur complement has not been computed */
194b5fa320bSStefano Zampini     PetscFunctionReturn(0);
195b5fa320bSStefano Zampini   }
196b8f61ee1SStefano Zampini   if (!expansion) { /* prepare for the condensation step */
197b5fa320bSStefano Zampini     PetscInt sizeredrhs = mumps->id.nrhs*mumps->id.size_schur;
198b5fa320bSStefano Zampini     /* allocate MUMPS internal array to store reduced right-hand sides */
199b5fa320bSStefano Zampini     if (!mumps->id.redrhs || sizeredrhs > mumps->sizeredrhs) {
200b5fa320bSStefano Zampini       ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr);
201b5fa320bSStefano Zampini       mumps->id.lredrhs = mumps->id.size_schur;
202b5fa320bSStefano Zampini       ierr = PetscMalloc1(mumps->id.nrhs*mumps->id.lredrhs,&mumps->id.redrhs);CHKERRQ(ierr);
203b5fa320bSStefano Zampini       mumps->sizeredrhs = mumps->id.nrhs*mumps->id.lredrhs;
204b5fa320bSStefano Zampini     }
205b5fa320bSStefano Zampini     mumps->id.ICNTL(26) = 1; /* condensation phase */
206b5fa320bSStefano Zampini   } else { /* prepare for the expansion step */
207b8f61ee1SStefano Zampini     /* solve Schur complement (this has to be done by the MUMPS user, so basically us) */
208b3cb21ddSStefano Zampini     ierr = MatMumpsSolveSchur_Private(F);CHKERRQ(ierr);
209b5fa320bSStefano Zampini     mumps->id.ICNTL(26) = 2; /* expansion phase */
2103ab56b82SJunchao Zhang     PetscMUMPS_c(mumps);
211b5fa320bSStefano Zampini     if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1));
212b5fa320bSStefano Zampini     /* restore defaults */
213b5fa320bSStefano Zampini     mumps->id.ICNTL(26) = -1;
214d3d598ffSStefano Zampini     /* free MUMPS internal array for redrhs if we have solved for multiple rhs in order to save memory space */
215d3d598ffSStefano Zampini     if (mumps->id.nrhs > 1) {
216d3d598ffSStefano Zampini       ierr = PetscFree(mumps->id.redrhs);CHKERRQ(ierr);
217d3d598ffSStefano Zampini       mumps->id.lredrhs = 0;
218d3d598ffSStefano Zampini       mumps->sizeredrhs = 0;
219d3d598ffSStefano Zampini     }
220b5fa320bSStefano Zampini   }
221b5fa320bSStefano Zampini   PetscFunctionReturn(0);
222b5fa320bSStefano Zampini }
223b5fa320bSStefano Zampini 
224397b6df1SKris Buschelman /*
225d341cd04SHong Zhang   MatConvertToTriples_A_B - convert Petsc matrix to triples: row[nz], col[nz], val[nz]
226d341cd04SHong Zhang 
227397b6df1SKris Buschelman   input:
22875480915SPierre Jolivet     A       - matrix in aij,baij or sbaij format
229397b6df1SKris Buschelman     shift   - 0: C style output triple; 1: Fortran style output triple.
230bccb9932SShri Abhyankar     reuse   - MAT_INITIAL_MATRIX: spaces are allocated and values are set for the triple
231bccb9932SShri Abhyankar               MAT_REUSE_MATRIX:   only the values in v array are updated
232397b6df1SKris Buschelman   output:
233397b6df1SKris Buschelman     nnz     - dim of r, c, and v (number of local nonzero entries of A)
234397b6df1SKris Buschelman     r, c, v - row and col index, matrix values (matrix triples)
235eb9baa12SBarry Smith 
236eb9baa12SBarry Smith   The returned values r, c, and sometimes v are obtained in a single PetscMalloc(). Then in MatDestroy_MUMPS() it is
2377ee00b23SStefano Zampini   freed with PetscFree(mumps->irn);  This is not ideal code, the fact that v is ONLY sometimes part of mumps->irn means
238eb9baa12SBarry Smith   that the PetscMalloc() cannot easily be replaced with a PetscMalloc3().
239eb9baa12SBarry Smith 
240397b6df1SKris Buschelman  */
24116ebf90aSShri Abhyankar 
242bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
243b24902e0SBarry Smith {
244185f6596SHong Zhang   const PetscInt *ai,*aj,*ajj,M=A->rmap->n;
24567877ebaSShri Abhyankar   PetscInt       nz,rnz,i,j;
246dfbe8321SBarry Smith   PetscErrorCode ierr;
247c1490034SHong Zhang   PetscInt       *row,*col;
24816ebf90aSShri Abhyankar   Mat_SeqAIJ     *aa=(Mat_SeqAIJ*)A->data;
249397b6df1SKris Buschelman 
250397b6df1SKris Buschelman   PetscFunctionBegin;
25116ebf90aSShri Abhyankar   *v=aa->a;
252bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
2532205254eSKarl Rupp     nz   = aa->nz;
2542205254eSKarl Rupp     ai   = aa->i;
2552205254eSKarl Rupp     aj   = aa->j;
25616ebf90aSShri Abhyankar     *nnz = nz;
257785e854fSJed Brown     ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr);
258185f6596SHong Zhang     col  = row + nz;
259185f6596SHong Zhang 
26016ebf90aSShri Abhyankar     nz = 0;
26116ebf90aSShri Abhyankar     for (i=0; i<M; i++) {
26216ebf90aSShri Abhyankar       rnz = ai[i+1] - ai[i];
26367877ebaSShri Abhyankar       ajj = aj + ai[i];
26467877ebaSShri Abhyankar       for (j=0; j<rnz; j++) {
26567877ebaSShri Abhyankar         row[nz] = i+shift; col[nz++] = ajj[j] + shift;
26616ebf90aSShri Abhyankar       }
26716ebf90aSShri Abhyankar     }
26816ebf90aSShri Abhyankar     *r = row; *c = col;
26916ebf90aSShri Abhyankar   }
27016ebf90aSShri Abhyankar   PetscFunctionReturn(0);
27116ebf90aSShri Abhyankar }
272397b6df1SKris Buschelman 
2737ee00b23SStefano Zampini PetscErrorCode MatConvertToTriples_seqsell_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
2747ee00b23SStefano Zampini {
2757ee00b23SStefano Zampini   Mat_SeqSELL *a=(Mat_SeqSELL*)A->data;
2767ee00b23SStefano Zampini   PetscInt    *ptr;
2777ee00b23SStefano Zampini 
2787ee00b23SStefano Zampini   PetscFunctionBegin;
2797ee00b23SStefano Zampini   *v = a->val;
2807ee00b23SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
2817ee00b23SStefano Zampini     PetscInt       nz,i,j,row;
2827ee00b23SStefano Zampini     PetscErrorCode ierr;
2837ee00b23SStefano Zampini 
2847ee00b23SStefano Zampini     nz   = a->sliidx[a->totalslices];
2857ee00b23SStefano Zampini     *nnz = nz;
2867ee00b23SStefano Zampini     ierr = PetscMalloc1(2*nz, &ptr);CHKERRQ(ierr);
2877ee00b23SStefano Zampini     *r   = ptr;
2887ee00b23SStefano Zampini     *c   = ptr + nz;
2897ee00b23SStefano Zampini 
2907ee00b23SStefano Zampini     for (i=0; i<a->totalslices; i++) {
2917ee00b23SStefano Zampini       for (j=a->sliidx[i],row=0; j<a->sliidx[i+1]; j++,row=((row+1)&0x07)) {
2927ee00b23SStefano Zampini         *ptr++ = 8*i + row + shift;
2937ee00b23SStefano Zampini       }
2947ee00b23SStefano Zampini     }
2957ee00b23SStefano Zampini     for (i=0;i<nz;i++) *ptr++ = a->colidx[i] + shift;
2967ee00b23SStefano Zampini   }
2977ee00b23SStefano Zampini   PetscFunctionReturn(0);
2987ee00b23SStefano Zampini }
2997ee00b23SStefano Zampini 
300bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqbaij_seqaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
30167877ebaSShri Abhyankar {
30267877ebaSShri Abhyankar   Mat_SeqBAIJ    *aa=(Mat_SeqBAIJ*)A->data;
30333d57670SJed Brown   const PetscInt *ai,*aj,*ajj,bs2 = aa->bs2;
30433d57670SJed Brown   PetscInt       bs,M,nz,idx=0,rnz,i,j,k,m;
30567877ebaSShri Abhyankar   PetscErrorCode ierr;
30667877ebaSShri Abhyankar   PetscInt       *row,*col;
30767877ebaSShri Abhyankar 
30867877ebaSShri Abhyankar   PetscFunctionBegin;
30933d57670SJed Brown   ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr);
31033d57670SJed Brown   M = A->rmap->N/bs;
311cf3759fdSShri Abhyankar   *v = aa->a;
312bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
313cf3759fdSShri Abhyankar     ai   = aa->i; aj = aa->j;
31467877ebaSShri Abhyankar     nz   = bs2*aa->nz;
31567877ebaSShri Abhyankar     *nnz = nz;
316785e854fSJed Brown     ierr = PetscMalloc1(2*nz, &row);CHKERRQ(ierr);
317185f6596SHong Zhang     col  = row + nz;
318185f6596SHong Zhang 
31967877ebaSShri Abhyankar     for (i=0; i<M; i++) {
32067877ebaSShri Abhyankar       ajj = aj + ai[i];
32167877ebaSShri Abhyankar       rnz = ai[i+1] - ai[i];
32267877ebaSShri Abhyankar       for (k=0; k<rnz; k++) {
32367877ebaSShri Abhyankar         for (j=0; j<bs; j++) {
32467877ebaSShri Abhyankar           for (m=0; m<bs; m++) {
32567877ebaSShri Abhyankar             row[idx]   = i*bs + m + shift;
326cf3759fdSShri Abhyankar             col[idx++] = bs*(ajj[k]) + j + shift;
32767877ebaSShri Abhyankar           }
32867877ebaSShri Abhyankar         }
32967877ebaSShri Abhyankar       }
33067877ebaSShri Abhyankar     }
331cf3759fdSShri Abhyankar     *r = row; *c = col;
33267877ebaSShri Abhyankar   }
33367877ebaSShri Abhyankar   PetscFunctionReturn(0);
33467877ebaSShri Abhyankar }
33567877ebaSShri Abhyankar 
336bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqsbaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r,int **c,PetscScalar **v)
33716ebf90aSShri Abhyankar {
33875480915SPierre Jolivet   const PetscInt *ai, *aj,*ajj;
33975480915SPierre Jolivet   PetscInt        nz,rnz,i,j,k,m,bs;
34016ebf90aSShri Abhyankar   PetscErrorCode  ierr;
34116ebf90aSShri Abhyankar   PetscInt        *row,*col;
34275480915SPierre Jolivet   PetscScalar     *val;
34316ebf90aSShri Abhyankar   Mat_SeqSBAIJ    *aa=(Mat_SeqSBAIJ*)A->data;
34475480915SPierre Jolivet   const PetscInt  bs2=aa->bs2,mbs=aa->mbs;
34538548759SBarry Smith #if defined(PETSC_USE_COMPLEX)
34638548759SBarry Smith   PetscBool      hermitian;
34738548759SBarry Smith #endif
34816ebf90aSShri Abhyankar 
34916ebf90aSShri Abhyankar   PetscFunctionBegin;
35038548759SBarry Smith #if defined(PETSC_USE_COMPLEX)
35138548759SBarry Smith   ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr);
35238548759SBarry Smith   if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy");
35338548759SBarry Smith #endif
3542205254eSKarl Rupp   ai   = aa->i;
3552205254eSKarl Rupp   aj   = aa->j;
35675480915SPierre Jolivet   ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr);
35775480915SPierre Jolivet   if (reuse == MAT_INITIAL_MATRIX) {
35875480915SPierre Jolivet     nz   = aa->nz;
359a81fe166SPierre Jolivet     ierr = PetscMalloc((2*bs2*nz*sizeof(PetscInt)+(bs>1?bs2*nz*sizeof(PetscScalar):0)), &row);CHKERRQ(ierr);
36075480915SPierre Jolivet     col  = row + bs2*nz;
361a81fe166SPierre Jolivet     if (bs>1)
36275480915SPierre Jolivet       val = (PetscScalar*)(col + bs2*nz);
363a81fe166SPierre Jolivet     else
364a81fe166SPierre Jolivet       val = aa->a;
36575480915SPierre Jolivet 
36675480915SPierre Jolivet     *r = row; *c = col; *v = val;
36775480915SPierre Jolivet   } else {
36875480915SPierre Jolivet     row = *r; col = *c; val = *v;
36975480915SPierre Jolivet   }
370185f6596SHong Zhang 
37116ebf90aSShri Abhyankar   nz = 0;
372a81fe166SPierre Jolivet   if (bs>1) {
37375480915SPierre Jolivet     for (i=0; i<mbs; i++) {
37416ebf90aSShri Abhyankar       rnz = ai[i+1] - ai[i];
37567877ebaSShri Abhyankar       ajj = aj + ai[i];
37675480915SPierre Jolivet       for (j=0; j<rnz; j++) {
37775480915SPierre Jolivet         for (k=0; k<bs; k++) {
37875480915SPierre Jolivet           for (m=0; m<bs; m++) {
379*ec4f40fdSPierre Jolivet             if (ajj[j]>i || k>=m) {
38075480915SPierre Jolivet               if (reuse == MAT_INITIAL_MATRIX) {
38175480915SPierre Jolivet                 row[nz] = i*bs + m + shift;
38275480915SPierre Jolivet                 col[nz] = ajj[j]*bs + k + shift;
38375480915SPierre Jolivet               }
38475480915SPierre Jolivet               val[nz++] = aa->a[(ai[i]+j)*bs2 + m + k*bs];
38575480915SPierre Jolivet             }
38675480915SPierre Jolivet           }
38775480915SPierre Jolivet         }
38875480915SPierre Jolivet       }
38975480915SPierre Jolivet     }
390a81fe166SPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) {
391a81fe166SPierre Jolivet     for (i=0; i<mbs; i++) {
392a81fe166SPierre Jolivet       rnz = ai[i+1] - ai[i];
393a81fe166SPierre Jolivet       ajj = aj + ai[i];
394a81fe166SPierre Jolivet       for (j=0; j<rnz; j++) {
395a81fe166SPierre Jolivet         row[nz] = i+shift; col[nz++] = ajj[j] + shift;
396a81fe166SPierre Jolivet       }
397a81fe166SPierre Jolivet     }
398a81fe166SPierre Jolivet     if (nz != aa->nz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Different numbers of nonzeros %D != %D",nz,aa->nz);
39975480915SPierre Jolivet   }
40075480915SPierre Jolivet   *nnz = nz;
40116ebf90aSShri Abhyankar   PetscFunctionReturn(0);
40216ebf90aSShri Abhyankar }
40316ebf90aSShri Abhyankar 
404bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_seqaij_seqsbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
40516ebf90aSShri Abhyankar {
40667877ebaSShri Abhyankar   const PetscInt    *ai,*aj,*ajj,*adiag,M=A->rmap->n;
40767877ebaSShri Abhyankar   PetscInt          nz,rnz,i,j;
40867877ebaSShri Abhyankar   const PetscScalar *av,*v1;
40916ebf90aSShri Abhyankar   PetscScalar       *val;
41016ebf90aSShri Abhyankar   PetscErrorCode    ierr;
41116ebf90aSShri Abhyankar   PetscInt          *row,*col;
412829b1710SHong Zhang   Mat_SeqAIJ        *aa=(Mat_SeqAIJ*)A->data;
41329b521d4Sstefano_zampini   PetscBool         missing;
41438548759SBarry Smith #if defined(PETSC_USE_COMPLEX)
41538548759SBarry Smith   PetscBool         hermitian;
41638548759SBarry Smith #endif
41716ebf90aSShri Abhyankar 
41816ebf90aSShri Abhyankar   PetscFunctionBegin;
41938548759SBarry Smith #if defined(PETSC_USE_COMPLEX)
42038548759SBarry Smith   ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr);
42138548759SBarry Smith   if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy");
42238548759SBarry Smith #endif
42316ebf90aSShri Abhyankar   ai    = aa->i; aj = aa->j; av = aa->a;
42416ebf90aSShri Abhyankar   adiag = aa->diag;
42529b521d4Sstefano_zampini   ierr  = MatMissingDiagonal_SeqAIJ(A,&missing,&i);CHKERRQ(ierr);
426bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
4277ee00b23SStefano Zampini     /* count nz in the upper triangular part of A */
428829b1710SHong Zhang     nz = 0;
42929b521d4Sstefano_zampini     if (missing) {
43029b521d4Sstefano_zampini       for (i=0; i<M; i++) {
43129b521d4Sstefano_zampini         if (PetscUnlikely(adiag[i] >= ai[i+1])) {
43229b521d4Sstefano_zampini           for (j=ai[i];j<ai[i+1];j++) {
43329b521d4Sstefano_zampini             if (aj[j] < i) continue;
43429b521d4Sstefano_zampini             nz++;
43529b521d4Sstefano_zampini           }
43629b521d4Sstefano_zampini         } else {
43729b521d4Sstefano_zampini           nz += ai[i+1] - adiag[i];
43829b521d4Sstefano_zampini         }
43929b521d4Sstefano_zampini       }
44029b521d4Sstefano_zampini     } else {
441829b1710SHong Zhang       for (i=0; i<M; i++) nz += ai[i+1] - adiag[i];
44229b521d4Sstefano_zampini     }
44316ebf90aSShri Abhyankar     *nnz = nz;
444829b1710SHong Zhang 
445185f6596SHong Zhang     ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr);
446185f6596SHong Zhang     col  = row + nz;
447185f6596SHong Zhang     val  = (PetscScalar*)(col + nz);
448185f6596SHong Zhang 
44916ebf90aSShri Abhyankar     nz = 0;
45029b521d4Sstefano_zampini     if (missing) {
45129b521d4Sstefano_zampini       for (i=0; i<M; i++) {
45229b521d4Sstefano_zampini         if (PetscUnlikely(adiag[i] >= ai[i+1])) {
45329b521d4Sstefano_zampini           for (j=ai[i];j<ai[i+1];j++) {
45429b521d4Sstefano_zampini             if (aj[j] < i) continue;
45529b521d4Sstefano_zampini             row[nz] = i+shift;
45629b521d4Sstefano_zampini             col[nz] = aj[j]+shift;
45729b521d4Sstefano_zampini             val[nz] = av[j];
45829b521d4Sstefano_zampini             nz++;
45929b521d4Sstefano_zampini           }
46029b521d4Sstefano_zampini         } else {
46129b521d4Sstefano_zampini           rnz = ai[i+1] - adiag[i];
46229b521d4Sstefano_zampini           ajj = aj + adiag[i];
46329b521d4Sstefano_zampini           v1  = av + adiag[i];
46429b521d4Sstefano_zampini           for (j=0; j<rnz; j++) {
46529b521d4Sstefano_zampini             row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j];
46629b521d4Sstefano_zampini           }
46729b521d4Sstefano_zampini         }
46829b521d4Sstefano_zampini       }
46929b521d4Sstefano_zampini     } else {
47016ebf90aSShri Abhyankar       for (i=0; i<M; i++) {
47116ebf90aSShri Abhyankar         rnz = ai[i+1] - adiag[i];
47267877ebaSShri Abhyankar         ajj = aj + adiag[i];
473cf3759fdSShri Abhyankar         v1  = av + adiag[i];
47467877ebaSShri Abhyankar         for (j=0; j<rnz; j++) {
47567877ebaSShri Abhyankar           row[nz] = i+shift; col[nz] = ajj[j] + shift; val[nz++] = v1[j];
47616ebf90aSShri Abhyankar         }
47716ebf90aSShri Abhyankar       }
47829b521d4Sstefano_zampini     }
47916ebf90aSShri Abhyankar     *r = row; *c = col; *v = val;
480397b6df1SKris Buschelman   } else {
48116ebf90aSShri Abhyankar     nz = 0; val = *v;
48229b521d4Sstefano_zampini     if (missing) {
48316ebf90aSShri Abhyankar       for (i=0; i <M; i++) {
48429b521d4Sstefano_zampini         if (PetscUnlikely(adiag[i] >= ai[i+1])) {
48529b521d4Sstefano_zampini           for (j=ai[i];j<ai[i+1];j++) {
48629b521d4Sstefano_zampini             if (aj[j] < i) continue;
48729b521d4Sstefano_zampini             val[nz++] = av[j];
48829b521d4Sstefano_zampini           }
48929b521d4Sstefano_zampini         } else {
49016ebf90aSShri Abhyankar           rnz = ai[i+1] - adiag[i];
49167877ebaSShri Abhyankar           v1  = av + adiag[i];
49267877ebaSShri Abhyankar           for (j=0; j<rnz; j++) {
49367877ebaSShri Abhyankar             val[nz++] = v1[j];
49416ebf90aSShri Abhyankar           }
49516ebf90aSShri Abhyankar         }
49616ebf90aSShri Abhyankar       }
49729b521d4Sstefano_zampini     } else {
49816ebf90aSShri Abhyankar       for (i=0; i <M; i++) {
49916ebf90aSShri Abhyankar         rnz = ai[i+1] - adiag[i];
50016ebf90aSShri Abhyankar         v1  = av + adiag[i];
50116ebf90aSShri Abhyankar         for (j=0; j<rnz; j++) {
50216ebf90aSShri Abhyankar           val[nz++] = v1[j];
50316ebf90aSShri Abhyankar         }
50416ebf90aSShri Abhyankar       }
50516ebf90aSShri Abhyankar     }
50629b521d4Sstefano_zampini   }
50716ebf90aSShri Abhyankar   PetscFunctionReturn(0);
50816ebf90aSShri Abhyankar }
50916ebf90aSShri Abhyankar 
510bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpisbaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r,int **c, PetscScalar **v)
51116ebf90aSShri Abhyankar {
512*ec4f40fdSPierre Jolivet   const PetscInt    *ai,*aj,*bi,*bj,*garray,*ajj,*bjj;
51316ebf90aSShri Abhyankar   PetscErrorCode    ierr;
514*ec4f40fdSPierre Jolivet   PetscInt          rstart,nz,bs,i,j,k,m,jj,irow,countA,countB;
51516ebf90aSShri Abhyankar   PetscInt          *row,*col;
51616ebf90aSShri Abhyankar   const PetscScalar *av,*bv,*v1,*v2;
51716ebf90aSShri Abhyankar   PetscScalar       *val;
518397b6df1SKris Buschelman   Mat_MPISBAIJ      *mat = (Mat_MPISBAIJ*)A->data;
519397b6df1SKris Buschelman   Mat_SeqSBAIJ      *aa  = (Mat_SeqSBAIJ*)(mat->A)->data;
520397b6df1SKris Buschelman   Mat_SeqBAIJ       *bb  = (Mat_SeqBAIJ*)(mat->B)->data;
521*ec4f40fdSPierre Jolivet   const PetscInt    bs2=aa->bs2,mbs=aa->mbs;
52238548759SBarry Smith #if defined(PETSC_USE_COMPLEX)
52338548759SBarry Smith   PetscBool         hermitian;
52438548759SBarry Smith #endif
52516ebf90aSShri Abhyankar 
52616ebf90aSShri Abhyankar   PetscFunctionBegin;
52738548759SBarry Smith #if defined(PETSC_USE_COMPLEX)
52838548759SBarry Smith   ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr);
52938548759SBarry Smith   if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy");
53038548759SBarry Smith #endif
531*ec4f40fdSPierre Jolivet   ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr);
53238548759SBarry Smith   rstart = A->rmap->rstart;
53338548759SBarry Smith   ai = aa->i;
53438548759SBarry Smith   aj = aa->j;
53538548759SBarry Smith   bi = bb->i;
53638548759SBarry Smith   bj = bb->j;
53738548759SBarry Smith   av = aa->a;
53838548759SBarry Smith   bv = bb->a;
539397b6df1SKris Buschelman 
5402205254eSKarl Rupp   garray = mat->garray;
5412205254eSKarl Rupp 
542bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
54316ebf90aSShri Abhyankar     nz   = aa->nz + bb->nz;
544*ec4f40fdSPierre Jolivet     ierr = PetscMalloc((2*bs2*nz*sizeof(PetscInt)+bs2*nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr);
545*ec4f40fdSPierre Jolivet     col  = row + bs2*nz;
546*ec4f40fdSPierre Jolivet     val  = (PetscScalar*)(col + bs2*nz);
547185f6596SHong Zhang 
548397b6df1SKris Buschelman     *r = row; *c = col; *v = val;
549397b6df1SKris Buschelman   } else {
550397b6df1SKris Buschelman     row = *r; col = *c; val = *v;
551397b6df1SKris Buschelman   }
552397b6df1SKris Buschelman 
553028e57e8SHong Zhang   jj = 0; irow = rstart;
554*ec4f40fdSPierre Jolivet   for (i=0; i<mbs; i++) {
555397b6df1SKris Buschelman     ajj    = aj + ai[i];                 /* ptr to the beginning of this row */
556397b6df1SKris Buschelman     countA = ai[i+1] - ai[i];
557397b6df1SKris Buschelman     countB = bi[i+1] - bi[i];
558397b6df1SKris Buschelman     bjj    = bj + bi[i];
559*ec4f40fdSPierre Jolivet     v1     = av + ai[i]*bs2;
560*ec4f40fdSPierre Jolivet     v2     = bv + bi[i]*bs2;
561397b6df1SKris Buschelman 
562*ec4f40fdSPierre Jolivet     if (bs>1) {
563*ec4f40fdSPierre Jolivet       /* A-part */
564*ec4f40fdSPierre Jolivet       for (j=0; j<countA; j++) {
565*ec4f40fdSPierre Jolivet         for (k=0; k<bs; k++) {
566*ec4f40fdSPierre Jolivet           for (m=0; m<bs; m++) {
567*ec4f40fdSPierre Jolivet             if (rstart + ajj[j]*bs>irow || k>=m) {
568*ec4f40fdSPierre Jolivet               if (reuse == MAT_INITIAL_MATRIX) {
569*ec4f40fdSPierre Jolivet                 row[jj] = irow + m + shift; col[jj] = rstart + ajj[j]*bs + k + shift;
570*ec4f40fdSPierre Jolivet               }
571*ec4f40fdSPierre Jolivet               val[jj++] = v1[j*bs2 + m + k*bs];
572*ec4f40fdSPierre Jolivet             }
573*ec4f40fdSPierre Jolivet           }
574*ec4f40fdSPierre Jolivet         }
575*ec4f40fdSPierre Jolivet       }
576*ec4f40fdSPierre Jolivet 
577*ec4f40fdSPierre Jolivet       /* B-part */
578*ec4f40fdSPierre Jolivet       for (j=0; j < countB; j++) {
579*ec4f40fdSPierre Jolivet         for (k=0; k<bs; k++) {
580*ec4f40fdSPierre Jolivet           for (m=0; m<bs; m++) {
581*ec4f40fdSPierre Jolivet             if (reuse == MAT_INITIAL_MATRIX) {
582*ec4f40fdSPierre Jolivet               row[jj] = irow + m + shift; col[jj] = garray[bjj[j]]*bs + k + shift;
583*ec4f40fdSPierre Jolivet             }
584*ec4f40fdSPierre Jolivet             val[jj++] = v2[j*bs2 + m + k*bs];
585*ec4f40fdSPierre Jolivet           }
586*ec4f40fdSPierre Jolivet         }
587*ec4f40fdSPierre Jolivet       }
588*ec4f40fdSPierre Jolivet     } else {
589397b6df1SKris Buschelman       /* A-part */
590397b6df1SKris Buschelman       for (j=0; j<countA; j++) {
591bccb9932SShri Abhyankar         if (reuse == MAT_INITIAL_MATRIX) {
592397b6df1SKris Buschelman           row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift;
593397b6df1SKris Buschelman         }
59416ebf90aSShri Abhyankar         val[jj++] = v1[j];
595397b6df1SKris Buschelman       }
59616ebf90aSShri Abhyankar 
59716ebf90aSShri Abhyankar       /* B-part */
59816ebf90aSShri Abhyankar       for (j=0; j < countB; j++) {
599bccb9932SShri Abhyankar         if (reuse == MAT_INITIAL_MATRIX) {
600397b6df1SKris Buschelman           row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift;
601397b6df1SKris Buschelman         }
60216ebf90aSShri Abhyankar         val[jj++] = v2[j];
60316ebf90aSShri Abhyankar       }
60416ebf90aSShri Abhyankar     }
605*ec4f40fdSPierre Jolivet     irow+=bs;
606*ec4f40fdSPierre Jolivet   }
607*ec4f40fdSPierre Jolivet   *nnz = jj;
60816ebf90aSShri Abhyankar   PetscFunctionReturn(0);
60916ebf90aSShri Abhyankar }
61016ebf90aSShri Abhyankar 
611bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
61216ebf90aSShri Abhyankar {
61316ebf90aSShri Abhyankar   const PetscInt    *ai, *aj, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj;
61416ebf90aSShri Abhyankar   PetscErrorCode    ierr;
61516ebf90aSShri Abhyankar   PetscInt          rstart,nz,i,j,jj,irow,countA,countB;
61616ebf90aSShri Abhyankar   PetscInt          *row,*col;
61716ebf90aSShri Abhyankar   const PetscScalar *av, *bv,*v1,*v2;
61816ebf90aSShri Abhyankar   PetscScalar       *val;
61916ebf90aSShri Abhyankar   Mat_MPIAIJ        *mat = (Mat_MPIAIJ*)A->data;
62016ebf90aSShri Abhyankar   Mat_SeqAIJ        *aa  = (Mat_SeqAIJ*)(mat->A)->data;
62116ebf90aSShri Abhyankar   Mat_SeqAIJ        *bb  = (Mat_SeqAIJ*)(mat->B)->data;
62216ebf90aSShri Abhyankar 
62316ebf90aSShri Abhyankar   PetscFunctionBegin;
62438548759SBarry Smith   rstart = A->rmap->rstart;
62538548759SBarry Smith   ai = aa->i;
62638548759SBarry Smith   aj = aa->j;
62738548759SBarry Smith   bi = bb->i;
62838548759SBarry Smith   bj = bb->j;
62938548759SBarry Smith   av = aa->a;
63038548759SBarry Smith   bv = bb->a;
63116ebf90aSShri Abhyankar 
6322205254eSKarl Rupp   garray = mat->garray;
6332205254eSKarl Rupp 
634bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
63516ebf90aSShri Abhyankar     nz   = aa->nz + bb->nz;
63616ebf90aSShri Abhyankar     *nnz = nz;
637185f6596SHong Zhang     ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr);
638185f6596SHong Zhang     col  = row + nz;
639185f6596SHong Zhang     val  = (PetscScalar*)(col + nz);
640185f6596SHong Zhang 
64116ebf90aSShri Abhyankar     *r = row; *c = col; *v = val;
64216ebf90aSShri Abhyankar   } else {
64316ebf90aSShri Abhyankar     row = *r; col = *c; val = *v;
64416ebf90aSShri Abhyankar   }
64516ebf90aSShri Abhyankar 
64616ebf90aSShri Abhyankar   jj = 0; irow = rstart;
64716ebf90aSShri Abhyankar   for (i=0; i<m; i++) {
64816ebf90aSShri Abhyankar     ajj    = aj + ai[i];                 /* ptr to the beginning of this row */
64916ebf90aSShri Abhyankar     countA = ai[i+1] - ai[i];
65016ebf90aSShri Abhyankar     countB = bi[i+1] - bi[i];
65116ebf90aSShri Abhyankar     bjj    = bj + bi[i];
65216ebf90aSShri Abhyankar     v1     = av + ai[i];
65316ebf90aSShri Abhyankar     v2     = bv + bi[i];
65416ebf90aSShri Abhyankar 
65516ebf90aSShri Abhyankar     /* A-part */
65616ebf90aSShri Abhyankar     for (j=0; j<countA; j++) {
657bccb9932SShri Abhyankar       if (reuse == MAT_INITIAL_MATRIX) {
65816ebf90aSShri Abhyankar         row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift;
65916ebf90aSShri Abhyankar       }
66016ebf90aSShri Abhyankar       val[jj++] = v1[j];
66116ebf90aSShri Abhyankar     }
66216ebf90aSShri Abhyankar 
66316ebf90aSShri Abhyankar     /* B-part */
66416ebf90aSShri Abhyankar     for (j=0; j < countB; j++) {
665bccb9932SShri Abhyankar       if (reuse == MAT_INITIAL_MATRIX) {
66616ebf90aSShri Abhyankar         row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift;
66716ebf90aSShri Abhyankar       }
66816ebf90aSShri Abhyankar       val[jj++] = v2[j];
66916ebf90aSShri Abhyankar     }
67016ebf90aSShri Abhyankar     irow++;
67116ebf90aSShri Abhyankar   }
67216ebf90aSShri Abhyankar   PetscFunctionReturn(0);
67316ebf90aSShri Abhyankar }
67416ebf90aSShri Abhyankar 
675bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpibaij_mpiaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
67667877ebaSShri Abhyankar {
67767877ebaSShri Abhyankar   Mat_MPIBAIJ       *mat    = (Mat_MPIBAIJ*)A->data;
67867877ebaSShri Abhyankar   Mat_SeqBAIJ       *aa     = (Mat_SeqBAIJ*)(mat->A)->data;
67967877ebaSShri Abhyankar   Mat_SeqBAIJ       *bb     = (Mat_SeqBAIJ*)(mat->B)->data;
68067877ebaSShri Abhyankar   const PetscInt    *ai     = aa->i, *bi = bb->i, *aj = aa->j, *bj = bb->j,*ajj, *bjj;
681d985c460SShri Abhyankar   const PetscInt    *garray = mat->garray,mbs=mat->mbs,rstart=A->rmap->rstart;
68233d57670SJed Brown   const PetscInt    bs2=mat->bs2;
68367877ebaSShri Abhyankar   PetscErrorCode    ierr;
68433d57670SJed Brown   PetscInt          bs,nz,i,j,k,n,jj,irow,countA,countB,idx;
68567877ebaSShri Abhyankar   PetscInt          *row,*col;
68667877ebaSShri Abhyankar   const PetscScalar *av=aa->a, *bv=bb->a,*v1,*v2;
68767877ebaSShri Abhyankar   PetscScalar       *val;
68867877ebaSShri Abhyankar 
68967877ebaSShri Abhyankar   PetscFunctionBegin;
69033d57670SJed Brown   ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr);
691bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
69267877ebaSShri Abhyankar     nz   = bs2*(aa->nz + bb->nz);
69367877ebaSShri Abhyankar     *nnz = nz;
694185f6596SHong Zhang     ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr);
695185f6596SHong Zhang     col  = row + nz;
696185f6596SHong Zhang     val  = (PetscScalar*)(col + nz);
697185f6596SHong Zhang 
69867877ebaSShri Abhyankar     *r = row; *c = col; *v = val;
69967877ebaSShri Abhyankar   } else {
70067877ebaSShri Abhyankar     row = *r; col = *c; val = *v;
70167877ebaSShri Abhyankar   }
70267877ebaSShri Abhyankar 
703d985c460SShri Abhyankar   jj = 0; irow = rstart;
70467877ebaSShri Abhyankar   for (i=0; i<mbs; i++) {
70567877ebaSShri Abhyankar     countA = ai[i+1] - ai[i];
70667877ebaSShri Abhyankar     countB = bi[i+1] - bi[i];
70767877ebaSShri Abhyankar     ajj    = aj + ai[i];
70867877ebaSShri Abhyankar     bjj    = bj + bi[i];
70967877ebaSShri Abhyankar     v1     = av + bs2*ai[i];
71067877ebaSShri Abhyankar     v2     = bv + bs2*bi[i];
71167877ebaSShri Abhyankar 
71267877ebaSShri Abhyankar     idx = 0;
71367877ebaSShri Abhyankar     /* A-part */
71467877ebaSShri Abhyankar     for (k=0; k<countA; k++) {
71567877ebaSShri Abhyankar       for (j=0; j<bs; j++) {
71667877ebaSShri Abhyankar         for (n=0; n<bs; n++) {
717bccb9932SShri Abhyankar           if (reuse == MAT_INITIAL_MATRIX) {
718d985c460SShri Abhyankar             row[jj] = irow + n + shift;
719d985c460SShri Abhyankar             col[jj] = rstart + bs*ajj[k] + j + shift;
72067877ebaSShri Abhyankar           }
72167877ebaSShri Abhyankar           val[jj++] = v1[idx++];
72267877ebaSShri Abhyankar         }
72367877ebaSShri Abhyankar       }
72467877ebaSShri Abhyankar     }
72567877ebaSShri Abhyankar 
72667877ebaSShri Abhyankar     idx = 0;
72767877ebaSShri Abhyankar     /* B-part */
72867877ebaSShri Abhyankar     for (k=0; k<countB; k++) {
72967877ebaSShri Abhyankar       for (j=0; j<bs; j++) {
73067877ebaSShri Abhyankar         for (n=0; n<bs; n++) {
731bccb9932SShri Abhyankar           if (reuse == MAT_INITIAL_MATRIX) {
732d985c460SShri Abhyankar             row[jj] = irow + n + shift;
733d985c460SShri Abhyankar             col[jj] = bs*garray[bjj[k]] + j + shift;
73467877ebaSShri Abhyankar           }
735d985c460SShri Abhyankar           val[jj++] = v2[idx++];
73667877ebaSShri Abhyankar         }
73767877ebaSShri Abhyankar       }
73867877ebaSShri Abhyankar     }
739d985c460SShri Abhyankar     irow += bs;
74067877ebaSShri Abhyankar   }
74167877ebaSShri Abhyankar   PetscFunctionReturn(0);
74267877ebaSShri Abhyankar }
74367877ebaSShri Abhyankar 
744bccb9932SShri Abhyankar PetscErrorCode MatConvertToTriples_mpiaij_mpisbaij(Mat A,int shift,MatReuse reuse,int *nnz,int **r, int **c, PetscScalar **v)
74516ebf90aSShri Abhyankar {
74616ebf90aSShri Abhyankar   const PetscInt    *ai, *aj,*adiag, *bi, *bj,*garray,m=A->rmap->n,*ajj,*bjj;
74716ebf90aSShri Abhyankar   PetscErrorCode    ierr;
748e0bace9bSHong Zhang   PetscInt          rstart,nz,nza,nzb,i,j,jj,irow,countA,countB;
74916ebf90aSShri Abhyankar   PetscInt          *row,*col;
75016ebf90aSShri Abhyankar   const PetscScalar *av, *bv,*v1,*v2;
75116ebf90aSShri Abhyankar   PetscScalar       *val;
75216ebf90aSShri Abhyankar   Mat_MPIAIJ        *mat =  (Mat_MPIAIJ*)A->data;
75316ebf90aSShri Abhyankar   Mat_SeqAIJ        *aa  =(Mat_SeqAIJ*)(mat->A)->data;
75416ebf90aSShri Abhyankar   Mat_SeqAIJ        *bb  =(Mat_SeqAIJ*)(mat->B)->data;
75538548759SBarry Smith #if defined(PETSC_USE_COMPLEX)
75638548759SBarry Smith   PetscBool         hermitian;
75738548759SBarry Smith #endif
75816ebf90aSShri Abhyankar 
75916ebf90aSShri Abhyankar   PetscFunctionBegin;
76038548759SBarry Smith #if defined(PETSC_USE_COMPLEX)
76138548759SBarry Smith   ierr = MatGetOption(A,MAT_HERMITIAN,&hermitian);CHKERRQ(ierr);
76238548759SBarry Smith   if (hermitian) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MUMPS does not support Hermitian symmetric matrices for Choleksy");
76338548759SBarry Smith #endif
76438548759SBarry Smith   ai     = aa->i;
76538548759SBarry Smith   aj     = aa->j;
76638548759SBarry Smith   adiag  = aa->diag;
76738548759SBarry Smith   bi     = bb->i;
76838548759SBarry Smith   bj     = bb->j;
76938548759SBarry Smith   garray = mat->garray;
77038548759SBarry Smith   av     = aa->a;
77138548759SBarry Smith   bv     = bb->a;
7722205254eSKarl Rupp 
77316ebf90aSShri Abhyankar   rstart = A->rmap->rstart;
77416ebf90aSShri Abhyankar 
775bccb9932SShri Abhyankar   if (reuse == MAT_INITIAL_MATRIX) {
776e0bace9bSHong Zhang     nza = 0;    /* num of upper triangular entries in mat->A, including diagonals */
777e0bace9bSHong Zhang     nzb = 0;    /* num of upper triangular entries in mat->B */
77816ebf90aSShri Abhyankar     for (i=0; i<m; i++) {
779e0bace9bSHong Zhang       nza   += (ai[i+1] - adiag[i]);
78016ebf90aSShri Abhyankar       countB = bi[i+1] - bi[i];
78116ebf90aSShri Abhyankar       bjj    = bj + bi[i];
782e0bace9bSHong Zhang       for (j=0; j<countB; j++) {
783e0bace9bSHong Zhang         if (garray[bjj[j]] > rstart) nzb++;
784e0bace9bSHong Zhang       }
785e0bace9bSHong Zhang     }
78616ebf90aSShri Abhyankar 
787e0bace9bSHong Zhang     nz   = nza + nzb; /* total nz of upper triangular part of mat */
78816ebf90aSShri Abhyankar     *nnz = nz;
789185f6596SHong Zhang     ierr = PetscMalloc((2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar)), &row);CHKERRQ(ierr);
790185f6596SHong Zhang     col  = row + nz;
791185f6596SHong Zhang     val  = (PetscScalar*)(col + nz);
792185f6596SHong Zhang 
79316ebf90aSShri Abhyankar     *r = row; *c = col; *v = val;
79416ebf90aSShri Abhyankar   } else {
79516ebf90aSShri Abhyankar     row = *r; col = *c; val = *v;
79616ebf90aSShri Abhyankar   }
79716ebf90aSShri Abhyankar 
79816ebf90aSShri Abhyankar   jj = 0; irow = rstart;
79916ebf90aSShri Abhyankar   for (i=0; i<m; i++) {
80016ebf90aSShri Abhyankar     ajj    = aj + adiag[i];                 /* ptr to the beginning of the diagonal of this row */
80116ebf90aSShri Abhyankar     v1     = av + adiag[i];
80216ebf90aSShri Abhyankar     countA = ai[i+1] - adiag[i];
80316ebf90aSShri Abhyankar     countB = bi[i+1] - bi[i];
80416ebf90aSShri Abhyankar     bjj    = bj + bi[i];
80516ebf90aSShri Abhyankar     v2     = bv + bi[i];
80616ebf90aSShri Abhyankar 
80716ebf90aSShri Abhyankar     /* A-part */
80816ebf90aSShri Abhyankar     for (j=0; j<countA; j++) {
809bccb9932SShri Abhyankar       if (reuse == MAT_INITIAL_MATRIX) {
81016ebf90aSShri Abhyankar         row[jj] = irow + shift; col[jj] = rstart + ajj[j] + shift;
81116ebf90aSShri Abhyankar       }
81216ebf90aSShri Abhyankar       val[jj++] = v1[j];
81316ebf90aSShri Abhyankar     }
81416ebf90aSShri Abhyankar 
81516ebf90aSShri Abhyankar     /* B-part */
81616ebf90aSShri Abhyankar     for (j=0; j < countB; j++) {
81716ebf90aSShri Abhyankar       if (garray[bjj[j]] > rstart) {
818bccb9932SShri Abhyankar         if (reuse == MAT_INITIAL_MATRIX) {
81916ebf90aSShri Abhyankar           row[jj] = irow + shift; col[jj] = garray[bjj[j]] + shift;
82016ebf90aSShri Abhyankar         }
82116ebf90aSShri Abhyankar         val[jj++] = v2[j];
82216ebf90aSShri Abhyankar       }
823397b6df1SKris Buschelman     }
824397b6df1SKris Buschelman     irow++;
825397b6df1SKris Buschelman   }
826397b6df1SKris Buschelman   PetscFunctionReturn(0);
827397b6df1SKris Buschelman }
828397b6df1SKris Buschelman 
829dfbe8321SBarry Smith PetscErrorCode MatDestroy_MUMPS(Mat A)
830dfbe8321SBarry Smith {
831e69c285eSBarry Smith   Mat_MUMPS      *mumps=(Mat_MUMPS*)A->data;
832dfbe8321SBarry Smith   PetscErrorCode ierr;
833b24902e0SBarry Smith 
834397b6df1SKris Buschelman   PetscFunctionBegin;
835a5e57a09SHong Zhang   ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr);
836a5e57a09SHong Zhang   ierr = VecScatterDestroy(&mumps->scat_rhs);CHKERRQ(ierr);
837a5e57a09SHong Zhang   ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr);
838801fbe65SHong Zhang   ierr = VecDestroy(&mumps->b_seq);CHKERRQ(ierr);
839a5e57a09SHong Zhang   ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr);
840a5e57a09SHong Zhang   ierr = PetscFree(mumps->id.perm_in);CHKERRQ(ierr);
841a5e57a09SHong Zhang   ierr = PetscFree(mumps->irn);CHKERRQ(ierr);
842b34f08ffSHong Zhang   ierr = PetscFree(mumps->info);CHKERRQ(ierr);
84359ac8732SStefano Zampini   ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr);
844a5e57a09SHong Zhang   mumps->id.job = JOB_END;
8453ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
8463ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT)
8473ab56b82SJunchao Zhang   if (mumps->use_petsc_omp_support) { ierr = PetscOmpCtrlDestroy(&mumps->omp_ctrl);CHKERRQ(ierr); }
8483ab56b82SJunchao Zhang #endif
8493ab56b82SJunchao Zhang   ierr = PetscFree2(mumps->recvcount,mumps->displs);CHKERRQ(ierr);
850e69c285eSBarry Smith   ierr = PetscFree(A->data);CHKERRQ(ierr);
851bf0cc555SLisandro Dalcin 
85297969023SHong Zhang   /* clear composed functions */
8533ca39a21SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr);
8545a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr);
8555a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr);
856bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetIcntl_C",NULL);CHKERRQ(ierr);
857bc6112feSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetIcntl_C",NULL);CHKERRQ(ierr);
858bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsSetCntl_C",NULL);CHKERRQ(ierr);
859bc6112feSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetCntl_C",NULL);CHKERRQ(ierr);
860ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfo_C",NULL);CHKERRQ(ierr);
861ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInfog_C",NULL);CHKERRQ(ierr);
862ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfo_C",NULL);CHKERRQ(ierr);
863ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetRinfog_C",NULL);CHKERRQ(ierr);
86489a9c03aSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverse_C",NULL);CHKERRQ(ierr);
8650e6b8875SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMumpsGetInverseTranspose_C",NULL);CHKERRQ(ierr);
866397b6df1SKris Buschelman   PetscFunctionReturn(0);
867397b6df1SKris Buschelman }
868397b6df1SKris Buschelman 
869b24902e0SBarry Smith PetscErrorCode MatSolve_MUMPS(Mat A,Vec b,Vec x)
870b24902e0SBarry Smith {
871e69c285eSBarry Smith   Mat_MUMPS        *mumps=(Mat_MUMPS*)A->data;
872d54de34fSKris Buschelman   PetscScalar      *array;
87367877ebaSShri Abhyankar   Vec              b_seq;
874329ec9b3SHong Zhang   IS               is_iden,is_petsc;
875dfbe8321SBarry Smith   PetscErrorCode   ierr;
876329ec9b3SHong Zhang   PetscInt         i;
877cc86f929SStefano Zampini   PetscBool        second_solve = PETSC_FALSE;
878883f2eb9SBarry Smith   static PetscBool cite1 = PETSC_FALSE,cite2 = PETSC_FALSE;
879397b6df1SKris Buschelman 
880397b6df1SKris Buschelman   PetscFunctionBegin;
881883f2eb9SBarry Smith   ierr = PetscCitationsRegister("@article{MUMPS01,\n  author = {P.~R. Amestoy and I.~S. Duff and J.-Y. L'Excellent and J. Koster},\n  title = {A fully asynchronous multifrontal solver using distributed dynamic scheduling},\n  journal = {SIAM Journal on Matrix Analysis and Applications},\n  volume = {23},\n  number = {1},\n  pages = {15--41},\n  year = {2001}\n}\n",&cite1);CHKERRQ(ierr);
882883f2eb9SBarry Smith   ierr = PetscCitationsRegister("@article{MUMPS02,\n  author = {P.~R. Amestoy and A. Guermouche and J.-Y. L'Excellent and S. Pralet},\n  title = {Hybrid scheduling for the parallel solution of linear systems},\n  journal = {Parallel Computing},\n  volume = {32},\n  number = {2},\n  pages = {136--156},\n  year = {2006}\n}\n",&cite2);CHKERRQ(ierr);
8832aca8efcSHong Zhang 
884603e8f96SBarry Smith   if (A->factorerrortype) {
8852aca8efcSHong Zhang     ierr = PetscInfo2(A,"MatSolve is called with singular matrix factor, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
8862aca8efcSHong Zhang     ierr = VecSetInf(x);CHKERRQ(ierr);
8872aca8efcSHong Zhang     PetscFunctionReturn(0);
8882aca8efcSHong Zhang   }
8892aca8efcSHong Zhang 
890be818407SHong Zhang   mumps->id.ICNTL(20)= 0; /* dense RHS */
891a5e57a09SHong Zhang   mumps->id.nrhs     = 1;
892a5e57a09SHong Zhang   b_seq          = mumps->b_seq;
8932d4298aeSJunchao Zhang   if (mumps->petsc_size > 1) {
894329ec9b3SHong Zhang     /* MUMPS only supports centralized rhs. Scatter b into a seqential rhs vector */
895a5e57a09SHong Zhang     ierr = VecScatterBegin(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
896a5e57a09SHong Zhang     ierr = VecScatterEnd(mumps->scat_rhs,b,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
897a5e57a09SHong Zhang     if (!mumps->myid) {ierr = VecGetArray(b_seq,&array);CHKERRQ(ierr);}
8983ab56b82SJunchao Zhang   } else {  /* petsc_size == 1 */
899397b6df1SKris Buschelman     ierr = VecCopy(b,x);CHKERRQ(ierr);
900397b6df1SKris Buschelman     ierr = VecGetArray(x,&array);CHKERRQ(ierr);
901397b6df1SKris Buschelman   }
902a5e57a09SHong Zhang   if (!mumps->myid) { /* define rhs on the host */
903a5e57a09SHong Zhang     mumps->id.nrhs = 1;
904940cd9d6SSatish Balay     mumps->id.rhs = (MumpsScalar*)array;
905397b6df1SKris Buschelman   }
906397b6df1SKris Buschelman 
907cc86f929SStefano Zampini   /*
908cc86f929SStefano Zampini      handle condensation step of Schur complement (if any)
909cc86f929SStefano Zampini      We set by default ICNTL(26) == -1 when Schur indices have been provided by the user.
910cc86f929SStefano Zampini      According to MUMPS (5.0.0) manual, any value should be harmful during the factorization phase
911cc86f929SStefano Zampini      Unless the user provides a valid value for ICNTL(26), MatSolve and MatMatSolve routines solve the full system.
912cc86f929SStefano Zampini      This requires an extra call to PetscMUMPS_c and the computation of the factors for S
913cc86f929SStefano Zampini   */
914583f777eSStefano Zampini   if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) {
9152d4298aeSJunchao Zhang     if (mumps->petsc_size > 1) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n");
916cc86f929SStefano Zampini     second_solve = PETSC_TRUE;
917b3cb21ddSStefano Zampini     ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr);
918cc86f929SStefano Zampini   }
919397b6df1SKris Buschelman   /* solve phase */
920329ec9b3SHong Zhang   /*-------------*/
921a5e57a09SHong Zhang   mumps->id.job = JOB_SOLVE;
9223ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
923a5e57a09SHong Zhang   if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1));
924397b6df1SKris Buschelman 
925b5fa320bSStefano Zampini   /* handle expansion step of Schur complement (if any) */
926cc86f929SStefano Zampini   if (second_solve) {
927b3cb21ddSStefano Zampini     ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr);
928cc86f929SStefano Zampini   }
929b5fa320bSStefano Zampini 
9302d4298aeSJunchao Zhang   if (mumps->petsc_size > 1) { /* convert mumps distributed solution to petsc mpi x */
931a5e57a09SHong Zhang     if (mumps->scat_sol && mumps->ICNTL9_pre != mumps->id.ICNTL(9)) {
932a5e57a09SHong Zhang       /* when id.ICNTL(9) changes, the contents of lsol_loc may change (not its size, lsol_loc), recreates scat_sol */
933a5e57a09SHong Zhang       ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr);
934397b6df1SKris Buschelman     }
935a5e57a09SHong Zhang     if (!mumps->scat_sol) { /* create scatter scat_sol */
936a5e57a09SHong Zhang       ierr = ISCreateStride(PETSC_COMM_SELF,mumps->id.lsol_loc,0,1,&is_iden);CHKERRQ(ierr); /* from */
937a5e57a09SHong Zhang       for (i=0; i<mumps->id.lsol_loc; i++) {
938a5e57a09SHong Zhang         mumps->id.isol_loc[i] -= 1; /* change Fortran style to C style */
939a5e57a09SHong Zhang       }
940a5e57a09SHong Zhang       ierr = ISCreateGeneral(PETSC_COMM_SELF,mumps->id.lsol_loc,mumps->id.isol_loc,PETSC_COPY_VALUES,&is_petsc);CHKERRQ(ierr);  /* to */
9419448b7f1SJunchao Zhang       ierr = VecScatterCreate(mumps->x_seq,is_iden,x,is_petsc,&mumps->scat_sol);CHKERRQ(ierr);
9426bf464f9SBarry Smith       ierr = ISDestroy(&is_iden);CHKERRQ(ierr);
9436bf464f9SBarry Smith       ierr = ISDestroy(&is_petsc);CHKERRQ(ierr);
9442205254eSKarl Rupp 
945a5e57a09SHong Zhang       mumps->ICNTL9_pre = mumps->id.ICNTL(9); /* save current value of id.ICNTL(9) */
946397b6df1SKris Buschelman     }
947a5e57a09SHong Zhang 
948a5e57a09SHong Zhang     ierr = VecScatterBegin(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
949a5e57a09SHong Zhang     ierr = VecScatterEnd(mumps->scat_sol,mumps->x_seq,x,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
950329ec9b3SHong Zhang   }
951353d7d71SJunchao Zhang 
952353d7d71SJunchao Zhang   if (mumps->petsc_size > 1) {if (!mumps->myid) {ierr = VecRestoreArray(b_seq,&array);CHKERRQ(ierr);}}
953353d7d71SJunchao Zhang   else {ierr = VecRestoreArray(x,&array);CHKERRQ(ierr);}
954353d7d71SJunchao Zhang 
9559880c9b4SStefano Zampini   ierr = PetscLogFlops(2.0*mumps->id.RINFO(3));CHKERRQ(ierr);
956397b6df1SKris Buschelman   PetscFunctionReturn(0);
957397b6df1SKris Buschelman }
958397b6df1SKris Buschelman 
95951d5961aSHong Zhang PetscErrorCode MatSolveTranspose_MUMPS(Mat A,Vec b,Vec x)
96051d5961aSHong Zhang {
961e69c285eSBarry Smith   Mat_MUMPS      *mumps=(Mat_MUMPS*)A->data;
96251d5961aSHong Zhang   PetscErrorCode ierr;
96351d5961aSHong Zhang 
96451d5961aSHong Zhang   PetscFunctionBegin;
965a5e57a09SHong Zhang   mumps->id.ICNTL(9) = 0;
9660ad0caddSJed Brown   ierr = MatSolve_MUMPS(A,b,x);CHKERRQ(ierr);
967a5e57a09SHong Zhang   mumps->id.ICNTL(9) = 1;
96851d5961aSHong Zhang   PetscFunctionReturn(0);
96951d5961aSHong Zhang }
97051d5961aSHong Zhang 
971e0b74bf9SHong Zhang PetscErrorCode MatMatSolve_MUMPS(Mat A,Mat B,Mat X)
972e0b74bf9SHong Zhang {
973bda8bf91SBarry Smith   PetscErrorCode    ierr;
974b8491c3eSStefano Zampini   Mat               Bt = NULL;
975b8491c3eSStefano Zampini   PetscBool         flg, flgT;
976e69c285eSBarry Smith   Mat_MUMPS         *mumps=(Mat_MUMPS*)A->data;
977334c5f61SHong Zhang   PetscInt          i,nrhs,M;
9781683a169SBarry Smith   PetscScalar       *array;
9791683a169SBarry Smith   const PetscScalar *rbray;
9805b7de3c2SKarl Rupp   PetscInt          lsol_loc,nlsol_loc,*isol_loc,*idxx,*isol_loc_save,iidx = 0;
9811683a169SBarry Smith   PetscScalar       *bray,*sol_loc,*sol_loc_save;
982be818407SHong Zhang   IS                is_to,is_from;
983beae5ec0SHong Zhang   PetscInt          k,proc,j,m,myrstart;
984be818407SHong Zhang   const PetscInt    *rstart;
985beae5ec0SHong Zhang   Vec               v_mpi,b_seq,msol_loc;
986be818407SHong Zhang   VecScatter        scat_rhs,scat_sol;
987be818407SHong Zhang   PetscScalar       *aa;
988be818407SHong Zhang   PetscInt          spnr,*ia,*ja;
989d56c302dSHong Zhang   Mat_MPIAIJ        *b = NULL;
990bda8bf91SBarry Smith 
991e0b74bf9SHong Zhang   PetscFunctionBegin;
992be818407SHong Zhang   ierr = PetscObjectTypeCompareAny((PetscObject)X,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr);
993be818407SHong Zhang   if (!flg) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_ARG_WRONG,"Matrix X must be MATDENSE matrix");
994be818407SHong Zhang 
9950298fd71SBarry Smith   ierr = PetscObjectTypeCompareAny((PetscObject)B,&flg,MATSEQDENSE,MATMPIDENSE,NULL);CHKERRQ(ierr);
996be818407SHong Zhang   if (flg) { /* dense B */
997c0be3364SHong Zhang     if (B->rmap->n != X->rmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Matrix B and X must have same row distribution");
998be818407SHong Zhang     mumps->id.ICNTL(20)= 0; /* dense RHS */
9990e6b8875SHong Zhang   } else { /* sparse B */
1000be818407SHong Zhang     ierr = PetscObjectTypeCompare((PetscObject)B,MATTRANSPOSEMAT,&flgT);CHKERRQ(ierr);
10010e6b8875SHong Zhang     if (flgT) { /* input B is transpose of actural RHS matrix,
10020e6b8875SHong Zhang                  because mumps requires sparse compressed COLUMN storage! See MatMatTransposeSolve_MUMPS() */
1003be818407SHong Zhang       ierr = MatTransposeGetMat(B,&Bt);CHKERRQ(ierr);
10040f52d626SJunchao Zhang     } else SETERRQ(PetscObjectComm((PetscObject)B),PETSC_ERR_ARG_WRONG,"Matrix B must be MATTRANSPOSEMAT matrix");
1005be818407SHong Zhang     mumps->id.ICNTL(20)= 1; /* sparse RHS */
1006b8491c3eSStefano Zampini   }
100787b22cf4SHong Zhang 
10089481e6e9SHong Zhang   ierr = MatGetSize(B,&M,&nrhs);CHKERRQ(ierr);
10099481e6e9SHong Zhang   mumps->id.nrhs = nrhs;
10109481e6e9SHong Zhang   mumps->id.lrhs = M;
10112b691707SHong Zhang   mumps->id.rhs  = NULL;
10129481e6e9SHong Zhang 
10132d4298aeSJunchao Zhang   if (mumps->petsc_size == 1) {
1014b8491c3eSStefano Zampini     PetscScalar *aa;
1015b8491c3eSStefano Zampini     PetscInt    spnr,*ia,*ja;
1016e94cce23SStefano Zampini     PetscBool   second_solve = PETSC_FALSE;
1017b8491c3eSStefano Zampini 
10182cd7d884SHong Zhang     ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr);
1019b8491c3eSStefano Zampini     mumps->id.rhs = (MumpsScalar*)array;
10202b691707SHong Zhang 
10212b691707SHong Zhang     if (!Bt) { /* dense B */
10222b691707SHong Zhang       /* copy B to X */
10231683a169SBarry Smith       ierr = MatDenseGetArrayRead(B,&rbray);CHKERRQ(ierr);
1024580bdb30SBarry Smith       ierr = PetscArraycpy(array,rbray,M*nrhs);CHKERRQ(ierr);
10251683a169SBarry Smith       ierr = MatDenseRestoreArrayRead(B,&rbray);CHKERRQ(ierr);
10262b691707SHong Zhang     } else { /* sparse B */
1027b8491c3eSStefano Zampini       ierr = MatSeqAIJGetArray(Bt,&aa);CHKERRQ(ierr);
1028be818407SHong Zhang       ierr = MatGetRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr);
1029c0be3364SHong Zhang       if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure");
10302b691707SHong Zhang       /* mumps requires ia and ja start at 1! */
1031b8491c3eSStefano Zampini       mumps->id.irhs_ptr    = ia;
1032b8491c3eSStefano Zampini       mumps->id.irhs_sparse = ja;
1033b8491c3eSStefano Zampini       mumps->id.nz_rhs      = ia[spnr] - 1;
1034b8491c3eSStefano Zampini       mumps->id.rhs_sparse  = (MumpsScalar*)aa;
1035b8491c3eSStefano Zampini     }
1036e94cce23SStefano Zampini     /* handle condensation step of Schur complement (if any) */
1037583f777eSStefano Zampini     if (mumps->id.size_schur > 0 && (mumps->id.ICNTL(26) < 0 || mumps->id.ICNTL(26) > 2)) {
1038e94cce23SStefano Zampini       second_solve = PETSC_TRUE;
1039b3cb21ddSStefano Zampini       ierr = MatMumpsHandleSchur_Private(A,PETSC_FALSE);CHKERRQ(ierr);
1040e94cce23SStefano Zampini     }
10412cd7d884SHong Zhang     /* solve phase */
10422cd7d884SHong Zhang     /*-------------*/
10432cd7d884SHong Zhang     mumps->id.job = JOB_SOLVE;
10443ab56b82SJunchao Zhang     PetscMUMPS_c(mumps);
10452cd7d884SHong Zhang     if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1));
1046b5fa320bSStefano Zampini 
1047b5fa320bSStefano Zampini     /* handle expansion step of Schur complement (if any) */
1048e94cce23SStefano Zampini     if (second_solve) {
1049b3cb21ddSStefano Zampini       ierr = MatMumpsHandleSchur_Private(A,PETSC_TRUE);CHKERRQ(ierr);
1050e94cce23SStefano Zampini     }
10512b691707SHong Zhang     if (Bt) { /* sparse B */
1052b8491c3eSStefano Zampini       ierr = MatSeqAIJRestoreArray(Bt,&aa);CHKERRQ(ierr);
1053be818407SHong Zhang       ierr = MatRestoreRowIJ(Bt,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr);
1054c0be3364SHong Zhang       if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure");
1055b8491c3eSStefano Zampini     }
10562cd7d884SHong Zhang     ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr);
1057be818407SHong Zhang     PetscFunctionReturn(0);
1058be818407SHong Zhang   }
1059801fbe65SHong Zhang 
1060be818407SHong Zhang   /*--------- parallel case: MUMPS requires rhs B to be centralized on the host! --------*/
10612d4298aeSJunchao Zhang   if (mumps->petsc_size > 1 && mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Parallel Schur complements not yet supported from PETSc\n");
1062241dbb5eSStefano Zampini 
1063beae5ec0SHong Zhang   /* create msol_loc to hold mumps local solution */
10641683a169SBarry Smith   isol_loc_save = mumps->id.isol_loc; /* save it for MatSolve() */
10651683a169SBarry Smith   sol_loc_save  = (PetscScalar*)mumps->id.sol_loc;
1066801fbe65SHong Zhang 
1067a1dfcbd9SJunchao Zhang   lsol_loc  = mumps->id.lsol_loc;
106871aed81dSHong Zhang   nlsol_loc = nrhs*lsol_loc;     /* length of sol_loc */
1069a1dfcbd9SJunchao Zhang   ierr = PetscMalloc2(nlsol_loc,&sol_loc,lsol_loc,&isol_loc);CHKERRQ(ierr);
1070940cd9d6SSatish Balay   mumps->id.sol_loc  = (MumpsScalar*)sol_loc;
1071801fbe65SHong Zhang   mumps->id.isol_loc = isol_loc;
1072801fbe65SHong Zhang 
1073beae5ec0SHong Zhang   ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,nlsol_loc,(PetscScalar*)sol_loc,&msol_loc);CHKERRQ(ierr);
10742cd7d884SHong Zhang 
10752b691707SHong Zhang   if (!Bt) { /* dense B */
107680577c12SJunchao Zhang     /* TODO: Because of non-contiguous indices, the created vecscatter scat_rhs is not done in MPI_Gather, resulting in
107780577c12SJunchao Zhang        very inefficient communication. An optimization is to use VecScatterCreateToZero to gather B to rank 0. Then on rank
107880577c12SJunchao Zhang        0, re-arrange B into desired order, which is a local operation.
107980577c12SJunchao Zhang      */
108080577c12SJunchao Zhang 
1081beae5ec0SHong Zhang     /* scatter v_mpi to b_seq because MUMPS only supports centralized rhs */
1082be818407SHong Zhang     /* wrap dense rhs matrix B into a vector v_mpi */
10832b691707SHong Zhang     ierr = MatGetLocalSize(B,&m,NULL);CHKERRQ(ierr);
10842b691707SHong Zhang     ierr = MatDenseGetArray(B,&bray);CHKERRQ(ierr);
10852b691707SHong Zhang     ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)B),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr);
10862b691707SHong Zhang     ierr = MatDenseRestoreArray(B,&bray);CHKERRQ(ierr);
10872b691707SHong Zhang 
1088be818407SHong Zhang     /* scatter v_mpi to b_seq in proc[0]. MUMPS requires rhs to be centralized on the host! */
1089801fbe65SHong Zhang     if (!mumps->myid) {
1090beae5ec0SHong Zhang       PetscInt *idx;
1091beae5ec0SHong Zhang       /* idx: maps from k-th index of v_mpi to (i,j)-th global entry of B */
1092beae5ec0SHong Zhang       ierr = PetscMalloc1(nrhs*M,&idx);CHKERRQ(ierr);
1093be818407SHong Zhang       ierr = MatGetOwnershipRanges(B,&rstart);CHKERRQ(ierr);
1094be818407SHong Zhang       k = 0;
10952d4298aeSJunchao Zhang       for (proc=0; proc<mumps->petsc_size; proc++){
1096be818407SHong Zhang         for (j=0; j<nrhs; j++){
1097beae5ec0SHong Zhang           for (i=rstart[proc]; i<rstart[proc+1]; i++) idx[k++] = j*M + i;
1098be818407SHong Zhang         }
1099be818407SHong Zhang       }
1100be818407SHong Zhang 
1101334c5f61SHong Zhang       ierr = VecCreateSeq(PETSC_COMM_SELF,nrhs*M,&b_seq);CHKERRQ(ierr);
1102beae5ec0SHong Zhang       ierr = ISCreateGeneral(PETSC_COMM_SELF,nrhs*M,idx,PETSC_OWN_POINTER,&is_to);CHKERRQ(ierr);
1103801fbe65SHong Zhang       ierr = ISCreateStride(PETSC_COMM_SELF,nrhs*M,0,1,&is_from);CHKERRQ(ierr);
1104801fbe65SHong Zhang     } else {
1105334c5f61SHong Zhang       ierr = VecCreateSeq(PETSC_COMM_SELF,0,&b_seq);CHKERRQ(ierr);
1106801fbe65SHong Zhang       ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_to);CHKERRQ(ierr);
1107801fbe65SHong Zhang       ierr = ISCreateStride(PETSC_COMM_SELF,0,0,1,&is_from);CHKERRQ(ierr);
1108801fbe65SHong Zhang     }
11099448b7f1SJunchao Zhang     ierr = VecScatterCreate(v_mpi,is_from,b_seq,is_to,&scat_rhs);CHKERRQ(ierr);
1110334c5f61SHong Zhang     ierr = VecScatterBegin(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1111801fbe65SHong Zhang     ierr = ISDestroy(&is_to);CHKERRQ(ierr);
1112801fbe65SHong Zhang     ierr = ISDestroy(&is_from);CHKERRQ(ierr);
1113334c5f61SHong Zhang     ierr = VecScatterEnd(scat_rhs,v_mpi,b_seq,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1114801fbe65SHong Zhang 
1115801fbe65SHong Zhang     if (!mumps->myid) { /* define rhs on the host */
1116334c5f61SHong Zhang       ierr = VecGetArray(b_seq,&bray);CHKERRQ(ierr);
1117940cd9d6SSatish Balay       mumps->id.rhs = (MumpsScalar*)bray;
1118334c5f61SHong Zhang       ierr = VecRestoreArray(b_seq,&bray);CHKERRQ(ierr);
1119801fbe65SHong Zhang     }
1120801fbe65SHong Zhang 
11212b691707SHong Zhang   } else { /* sparse B */
11222b691707SHong Zhang     b = (Mat_MPIAIJ*)Bt->data;
11232b691707SHong Zhang 
1124be818407SHong Zhang     /* wrap dense X into a vector v_mpi */
11252b691707SHong Zhang     ierr = MatGetLocalSize(X,&m,NULL);CHKERRQ(ierr);
11262b691707SHong Zhang     ierr = MatDenseGetArray(X,&bray);CHKERRQ(ierr);
11272b691707SHong Zhang     ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)X),1,nrhs*m,nrhs*M,(const PetscScalar*)bray,&v_mpi);CHKERRQ(ierr);
11282b691707SHong Zhang     ierr = MatDenseRestoreArray(X,&bray);CHKERRQ(ierr);
11292b691707SHong Zhang 
11302b691707SHong Zhang     if (!mumps->myid) {
11312b691707SHong Zhang       ierr = MatSeqAIJGetArray(b->A,&aa);CHKERRQ(ierr);
1132be818407SHong Zhang       ierr = MatGetRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr);
1133c0be3364SHong Zhang       if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure");
11342b691707SHong Zhang       /* mumps requires ia and ja start at 1! */
11352b691707SHong Zhang       mumps->id.irhs_ptr    = ia;
11362b691707SHong Zhang       mumps->id.irhs_sparse = ja;
11372b691707SHong Zhang       mumps->id.nz_rhs      = ia[spnr] - 1;
11382b691707SHong Zhang       mumps->id.rhs_sparse  = (MumpsScalar*)aa;
11392b691707SHong Zhang     } else {
11402b691707SHong Zhang       mumps->id.irhs_ptr    = NULL;
11412b691707SHong Zhang       mumps->id.irhs_sparse = NULL;
11422b691707SHong Zhang       mumps->id.nz_rhs      = 0;
11432b691707SHong Zhang       mumps->id.rhs_sparse  = NULL;
11442b691707SHong Zhang     }
11452b691707SHong Zhang   }
11462b691707SHong Zhang 
1147801fbe65SHong Zhang   /* solve phase */
1148801fbe65SHong Zhang   /*-------------*/
1149801fbe65SHong Zhang   mumps->id.job = JOB_SOLVE;
11503ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
1151801fbe65SHong Zhang   if (mumps->id.INFOG(1) < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d\n",mumps->id.INFOG(1));
1152801fbe65SHong Zhang 
1153334c5f61SHong Zhang   /* scatter mumps distributed solution to petsc vector v_mpi, which shares local arrays with solution matrix X */
115474f0fcc7SHong Zhang   ierr = MatDenseGetArray(X,&array);CHKERRQ(ierr);
115574f0fcc7SHong Zhang   ierr = VecPlaceArray(v_mpi,array);CHKERRQ(ierr);
1156801fbe65SHong Zhang 
1157334c5f61SHong Zhang   /* create scatter scat_sol */
1158be818407SHong Zhang   ierr = MatGetOwnershipRanges(X,&rstart);CHKERRQ(ierr);
1159beae5ec0SHong Zhang   /* iidx: index for scatter mumps solution to petsc X */
1160beae5ec0SHong Zhang 
1161beae5ec0SHong Zhang   ierr = ISCreateStride(PETSC_COMM_SELF,nlsol_loc,0,1,&is_from);CHKERRQ(ierr);
1162beae5ec0SHong Zhang   ierr = PetscMalloc1(nlsol_loc,&idxx);CHKERRQ(ierr);
1163beae5ec0SHong Zhang   for (i=0; i<lsol_loc; i++) {
1164beae5ec0SHong Zhang     isol_loc[i] -= 1; /* change Fortran style to C style. isol_loc[i+j*lsol_loc] contains x[isol_loc[i]] in j-th vector */
1165beae5ec0SHong Zhang 
11662d4298aeSJunchao Zhang     for (proc=0; proc<mumps->petsc_size; proc++){
1167beae5ec0SHong Zhang       if (isol_loc[i] >= rstart[proc] && isol_loc[i] < rstart[proc+1]) {
1168beae5ec0SHong Zhang         myrstart = rstart[proc];
1169beae5ec0SHong Zhang         k        = isol_loc[i] - myrstart;        /* local index on 1st column of petsc vector X */
1170beae5ec0SHong Zhang         iidx     = k + myrstart*nrhs;             /* maps mumps isol_loc[i] to petsc index in X */
1171beae5ec0SHong Zhang         m        = rstart[proc+1] - rstart[proc]; /* rows of X for this proc */
1172beae5ec0SHong Zhang         break;
1173be818407SHong Zhang       }
1174be818407SHong Zhang     }
1175be818407SHong Zhang 
1176beae5ec0SHong Zhang     for (j=0; j<nrhs; j++) idxx[i+j*lsol_loc] = iidx + j*m;
1177801fbe65SHong Zhang   }
1178be818407SHong Zhang   ierr = ISCreateGeneral(PETSC_COMM_SELF,nlsol_loc,idxx,PETSC_COPY_VALUES,&is_to);CHKERRQ(ierr);
1179beae5ec0SHong Zhang   ierr = VecScatterCreate(msol_loc,is_from,v_mpi,is_to,&scat_sol);CHKERRQ(ierr);
1180beae5ec0SHong Zhang   ierr = VecScatterBegin(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1181801fbe65SHong Zhang   ierr = ISDestroy(&is_from);CHKERRQ(ierr);
1182801fbe65SHong Zhang   ierr = ISDestroy(&is_to);CHKERRQ(ierr);
1183beae5ec0SHong Zhang   ierr = VecScatterEnd(scat_sol,msol_loc,v_mpi,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
1184801fbe65SHong Zhang   ierr = MatDenseRestoreArray(X,&array);CHKERRQ(ierr);
118571aed81dSHong Zhang 
118671aed81dSHong Zhang   /* free spaces */
11871683a169SBarry Smith   mumps->id.sol_loc  = (MumpsScalar*)sol_loc_save;
118871aed81dSHong Zhang   mumps->id.isol_loc = isol_loc_save;
118971aed81dSHong Zhang 
119071aed81dSHong Zhang   ierr = PetscFree2(sol_loc,isol_loc);CHKERRQ(ierr);
1191801fbe65SHong Zhang   ierr = PetscFree(idxx);CHKERRQ(ierr);
1192beae5ec0SHong Zhang   ierr = VecDestroy(&msol_loc);CHKERRQ(ierr);
119374f0fcc7SHong Zhang   ierr = VecDestroy(&v_mpi);CHKERRQ(ierr);
11942b691707SHong Zhang   if (Bt) {
11952b691707SHong Zhang     if (!mumps->myid) {
1196d56c302dSHong Zhang       b = (Mat_MPIAIJ*)Bt->data;
11972b691707SHong Zhang       ierr = MatSeqAIJRestoreArray(b->A,&aa);CHKERRQ(ierr);
1198be818407SHong Zhang       ierr = MatRestoreRowIJ(b->A,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr);
1199c0be3364SHong Zhang       if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot restore IJ structure");
12002b691707SHong Zhang     }
12012b691707SHong Zhang   } else {
1202334c5f61SHong Zhang     ierr = VecDestroy(&b_seq);CHKERRQ(ierr);
1203334c5f61SHong Zhang     ierr = VecScatterDestroy(&scat_rhs);CHKERRQ(ierr);
12042b691707SHong Zhang   }
1205334c5f61SHong Zhang   ierr = VecScatterDestroy(&scat_sol);CHKERRQ(ierr);
12069880c9b4SStefano Zampini   ierr = PetscLogFlops(2.0*nrhs*mumps->id.RINFO(3));CHKERRQ(ierr);
1207e0b74bf9SHong Zhang   PetscFunctionReturn(0);
1208e0b74bf9SHong Zhang }
1209e0b74bf9SHong Zhang 
1210eb3ef3b2SHong Zhang PetscErrorCode MatMatTransposeSolve_MUMPS(Mat A,Mat Bt,Mat X)
1211eb3ef3b2SHong Zhang {
1212eb3ef3b2SHong Zhang   PetscErrorCode ierr;
1213eb3ef3b2SHong Zhang   PetscBool      flg;
1214eb3ef3b2SHong Zhang   Mat            B;
1215eb3ef3b2SHong Zhang 
1216eb3ef3b2SHong Zhang   PetscFunctionBegin;
1217eb3ef3b2SHong Zhang   ierr = PetscObjectTypeCompareAny((PetscObject)Bt,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr);
1218eb3ef3b2SHong Zhang   if (!flg) SETERRQ(PetscObjectComm((PetscObject)Bt),PETSC_ERR_ARG_WRONG,"Matrix Bt must be MATAIJ matrix");
1219eb3ef3b2SHong Zhang 
1220eb3ef3b2SHong Zhang   /* Create B=Bt^T that uses Bt's data structure */
1221eb3ef3b2SHong Zhang   ierr = MatCreateTranspose(Bt,&B);CHKERRQ(ierr);
1222eb3ef3b2SHong Zhang 
12230e6b8875SHong Zhang   ierr = MatMatSolve_MUMPS(A,B,X);CHKERRQ(ierr);
1224eb3ef3b2SHong Zhang   ierr = MatDestroy(&B);CHKERRQ(ierr);
1225eb3ef3b2SHong Zhang   PetscFunctionReturn(0);
1226eb3ef3b2SHong Zhang }
1227eb3ef3b2SHong Zhang 
1228ace3df97SHong Zhang #if !defined(PETSC_USE_COMPLEX)
1229a58c3f20SHong Zhang /*
1230a58c3f20SHong Zhang   input:
1231a58c3f20SHong Zhang    F:        numeric factor
1232a58c3f20SHong Zhang   output:
1233a58c3f20SHong Zhang    nneg:     total number of negative pivots
123419d49a3bSHong Zhang    nzero:    total number of zero pivots
123519d49a3bSHong Zhang    npos:     (global dimension of F) - nneg - nzero
1236a58c3f20SHong Zhang */
1237dfbe8321SBarry Smith PetscErrorCode MatGetInertia_SBAIJMUMPS(Mat F,int *nneg,int *nzero,int *npos)
1238a58c3f20SHong Zhang {
1239e69c285eSBarry Smith   Mat_MUMPS      *mumps =(Mat_MUMPS*)F->data;
1240dfbe8321SBarry Smith   PetscErrorCode ierr;
1241c1490034SHong Zhang   PetscMPIInt    size;
1242a58c3f20SHong Zhang 
1243a58c3f20SHong Zhang   PetscFunctionBegin;
1244ce94432eSBarry Smith   ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&size);CHKERRQ(ierr);
1245bcb30aebSHong Zhang   /* MUMPS 4.3.1 calls ScaLAPACK when ICNTL(13)=0 (default), which does not offer the possibility to compute the inertia of a dense matrix. Set ICNTL(13)=1 to skip ScaLAPACK */
1246a5e57a09SHong Zhang   if (size > 1 && mumps->id.ICNTL(13) != 1) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"ICNTL(13)=%d. -mat_mumps_icntl_13 must be set as 1 for correct global matrix inertia\n",mumps->id.INFOG(13));
1247ed85ac9fSHong Zhang 
1248710ac8efSHong Zhang   if (nneg) *nneg = mumps->id.INFOG(12);
1249ed85ac9fSHong Zhang   if (nzero || npos) {
1250ed85ac9fSHong Zhang     if (mumps->id.ICNTL(24) != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"-mat_mumps_icntl_24 must be set as 1 for null pivot row detection");
1251710ac8efSHong Zhang     if (nzero) *nzero = mumps->id.INFOG(28);
1252710ac8efSHong Zhang     if (npos) *npos   = F->rmap->N - (mumps->id.INFOG(12) + mumps->id.INFOG(28));
1253a58c3f20SHong Zhang   }
1254a58c3f20SHong Zhang   PetscFunctionReturn(0);
1255a58c3f20SHong Zhang }
125619d49a3bSHong Zhang #endif
1257a58c3f20SHong Zhang 
12583ab56b82SJunchao Zhang PetscErrorCode MatMumpsGatherNonzerosOnMaster(MatReuse reuse,Mat_MUMPS *mumps)
12593ab56b82SJunchao Zhang {
12603ab56b82SJunchao Zhang   PetscErrorCode ierr;
12616ac9f4daSSatish Balay   PetscInt       i,nz=0,*irn,*jcn=0;
12626ac9f4daSSatish Balay   PetscScalar    *val=0;
12633ab56b82SJunchao Zhang   PetscMPIInt    mpinz,*recvcount=NULL,*displs=NULL;
12643ab56b82SJunchao Zhang 
12653ab56b82SJunchao Zhang   PetscFunctionBegin;
12663ab56b82SJunchao Zhang   if (mumps->omp_comm_size > 1) {
12673ab56b82SJunchao Zhang     if (reuse == MAT_INITIAL_MATRIX) {
12683ab56b82SJunchao Zhang       /* master first gathers counts of nonzeros to receive */
12693ab56b82SJunchao Zhang       if (mumps->is_omp_master) { ierr = PetscMalloc2(mumps->omp_comm_size,&recvcount,mumps->omp_comm_size,&displs);CHKERRQ(ierr); }
12703ab56b82SJunchao Zhang       ierr = PetscMPIIntCast(mumps->nz,&mpinz);CHKERRQ(ierr);
12713ab56b82SJunchao Zhang       ierr = MPI_Gather(&mpinz,1,MPI_INT,recvcount,1,MPI_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr);
12723ab56b82SJunchao Zhang 
12733ab56b82SJunchao Zhang       /* master allocates memory to receive nonzeros */
12743ab56b82SJunchao Zhang       if (mumps->is_omp_master) {
12753ab56b82SJunchao Zhang         displs[0] = 0;
12763ab56b82SJunchao Zhang         for (i=1; i<mumps->omp_comm_size; i++) displs[i] = displs[i-1] + recvcount[i-1];
12773ab56b82SJunchao Zhang         nz   = displs[mumps->omp_comm_size-1] + recvcount[mumps->omp_comm_size-1];
12783ab56b82SJunchao Zhang         ierr = PetscMalloc(2*nz*sizeof(PetscInt)+nz*sizeof(PetscScalar),&irn);CHKERRQ(ierr);
12793ab56b82SJunchao Zhang         jcn  = irn + nz;
12803ab56b82SJunchao Zhang         val  = (PetscScalar*)(jcn + nz);
12813ab56b82SJunchao Zhang       }
12823ab56b82SJunchao Zhang 
12833ab56b82SJunchao Zhang       /* save the gatherv plan */
12843ab56b82SJunchao Zhang       mumps->mpinz     = mpinz; /* used as send count */
12853ab56b82SJunchao Zhang       mumps->recvcount = recvcount;
12863ab56b82SJunchao Zhang       mumps->displs    = displs;
12873ab56b82SJunchao Zhang 
12883ab56b82SJunchao Zhang       /* master gathers nonzeros */
12893ab56b82SJunchao Zhang       ierr = MPI_Gatherv(mumps->irn,mpinz,MPIU_INT,irn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr);
12903ab56b82SJunchao Zhang       ierr = MPI_Gatherv(mumps->jcn,mpinz,MPIU_INT,jcn,mumps->recvcount,mumps->displs,MPIU_INT,0/*root*/,mumps->omp_comm);CHKERRQ(ierr);
12913ab56b82SJunchao Zhang       ierr = MPI_Gatherv(mumps->val,mpinz,MPIU_SCALAR,val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr);
12923ab56b82SJunchao Zhang 
12933ab56b82SJunchao Zhang       /* master frees its row/col/val and replaces them with bigger arrays */
12943ab56b82SJunchao Zhang       if (mumps->is_omp_master) {
12953ab56b82SJunchao Zhang         ierr = PetscFree(mumps->irn);CHKERRQ(ierr); /* irn/jcn/val are allocated together so free only irn */
12963ab56b82SJunchao Zhang         mumps->nz  = nz; /* it is a sum of mpinz over omp_comm */
12973ab56b82SJunchao Zhang         mumps->irn = irn;
12983ab56b82SJunchao Zhang         mumps->jcn = jcn;
12993ab56b82SJunchao Zhang         mumps->val = val;
13003ab56b82SJunchao Zhang       }
13013ab56b82SJunchao Zhang     } else {
13023ab56b82SJunchao Zhang       ierr = MPI_Gatherv((mumps->is_omp_master?MPI_IN_PLACE:mumps->val),mumps->mpinz,MPIU_SCALAR,mumps->val,mumps->recvcount,mumps->displs,MPIU_SCALAR,0/*root*/,mumps->omp_comm);CHKERRQ(ierr);
13033ab56b82SJunchao Zhang     }
13043ab56b82SJunchao Zhang   }
13053ab56b82SJunchao Zhang   PetscFunctionReturn(0);
13063ab56b82SJunchao Zhang }
13073ab56b82SJunchao Zhang 
13080481f469SBarry Smith PetscErrorCode MatFactorNumeric_MUMPS(Mat F,Mat A,const MatFactorInfo *info)
1309af281ebdSHong Zhang {
1310e69c285eSBarry Smith   Mat_MUMPS      *mumps =(Mat_MUMPS*)(F)->data;
13116849ba73SBarry Smith   PetscErrorCode ierr;
1312ace3abfcSBarry Smith   PetscBool      isMPIAIJ;
1313397b6df1SKris Buschelman 
1314397b6df1SKris Buschelman   PetscFunctionBegin;
13156baea169SHong Zhang   if (mumps->id.INFOG(1) < 0) {
13162aca8efcSHong Zhang     if (mumps->id.INFOG(1) == -6) {
13172aca8efcSHong Zhang       ierr = PetscInfo2(A,"MatFactorNumeric is called with singular matrix structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
13186baea169SHong Zhang     }
13196baea169SHong Zhang     ierr = PetscInfo2(A,"MatFactorNumeric is called after analysis phase fails, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
13202aca8efcSHong Zhang     PetscFunctionReturn(0);
13212aca8efcSHong Zhang   }
13226baea169SHong Zhang 
1323a5e57a09SHong Zhang   ierr = (*mumps->ConvertToTriples)(A, 1, MAT_REUSE_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr);
13243ab56b82SJunchao Zhang   ierr = MatMumpsGatherNonzerosOnMaster(MAT_REUSE_MATRIX,mumps);CHKERRQ(ierr);
1325397b6df1SKris Buschelman 
1326397b6df1SKris Buschelman   /* numerical factorization phase */
1327329ec9b3SHong Zhang   /*-------------------------------*/
1328a5e57a09SHong Zhang   mumps->id.job = JOB_FACTNUMERIC;
13294e34a73bSHong Zhang   if (!mumps->id.ICNTL(18)) { /* A is centralized */
1330a5e57a09SHong Zhang     if (!mumps->myid) {
1331940cd9d6SSatish Balay       mumps->id.a = (MumpsScalar*)mumps->val;
1332397b6df1SKris Buschelman     }
1333397b6df1SKris Buschelman   } else {
1334940cd9d6SSatish Balay     mumps->id.a_loc = (MumpsScalar*)mumps->val;
1335397b6df1SKris Buschelman   }
13363ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
1337a5e57a09SHong Zhang   if (mumps->id.INFOG(1) < 0) {
1338c0d63f2fSHong Zhang     if (A->erroriffailure) {
1339c0d63f2fSHong Zhang       SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));
1340151787a6SHong Zhang     } else {
1341c0d63f2fSHong Zhang       if (mumps->id.INFOG(1) == -10) { /* numerically singular matrix */
13422aca8efcSHong Zhang         ierr = PetscInfo2(F,"matrix is numerically singular, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1343603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT;
1344c0d63f2fSHong Zhang       } else if (mumps->id.INFOG(1) == -13) {
1345c0d63f2fSHong Zhang         ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, cannot allocate required memory %d megabytes\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1346603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_OUTMEMORY;
1347c0d63f2fSHong Zhang       } else if (mumps->id.INFOG(1) == -8 || mumps->id.INFOG(1) == -9 || (-16 < mumps->id.INFOG(1) && mumps->id.INFOG(1) < -10) ) {
1348c0d63f2fSHong Zhang         ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d, problem with workarray \n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1349603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_OUTMEMORY;
13502aca8efcSHong Zhang       } else {
1351c0d63f2fSHong Zhang         ierr = PetscInfo2(F,"MUMPS in numerical factorization phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1352603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_OTHER;
1353151787a6SHong Zhang       }
13542aca8efcSHong Zhang     }
1355397b6df1SKris Buschelman   }
1356a5e57a09SHong Zhang   if (!mumps->myid && mumps->id.ICNTL(16) > 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"  mumps->id.ICNTL(16):=%d\n",mumps->id.INFOG(16));
1357397b6df1SKris Buschelman 
1358b3cb21ddSStefano Zampini   F->assembled    = PETSC_TRUE;
1359a5e57a09SHong Zhang   mumps->matstruc = SAME_NONZERO_PATTERN;
1360b3cb21ddSStefano Zampini   if (F->schur) { /* reset Schur status to unfactored */
13613cb7dd0eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
13623cb7dd0eSStefano Zampini     F->schur->valid_GPU_matrix = PETSC_OFFLOAD_CPU;
13633cb7dd0eSStefano Zampini #endif
1364b3cb21ddSStefano Zampini     if (mumps->id.ICNTL(19) == 1) { /* stored by rows */
1365b3cb21ddSStefano Zampini       mumps->id.ICNTL(19) = 2;
1366b3cb21ddSStefano Zampini       ierr = MatTranspose(F->schur,MAT_INPLACE_MATRIX,&F->schur);CHKERRQ(ierr);
1367b3cb21ddSStefano Zampini     }
1368b3cb21ddSStefano Zampini     ierr = MatFactorRestoreSchurComplement(F,NULL,MAT_FACTOR_SCHUR_UNFACTORED);CHKERRQ(ierr);
1369b3cb21ddSStefano Zampini   }
137067877ebaSShri Abhyankar 
1371066565c5SStefano Zampini   /* just to be sure that ICNTL(19) value returned by a call from MatMumpsGetIcntl is always consistent */
1372066565c5SStefano Zampini   if (!mumps->sym && mumps->id.ICNTL(19) && mumps->id.ICNTL(19) != 1) mumps->id.ICNTL(19) = 3;
1373066565c5SStefano Zampini 
13743ab56b82SJunchao Zhang   if (!mumps->is_omp_master) mumps->id.INFO(23) = 0;
13752d4298aeSJunchao Zhang   if (mumps->petsc_size > 1) {
137667877ebaSShri Abhyankar     PetscInt    lsol_loc;
137767877ebaSShri Abhyankar     PetscScalar *sol_loc;
13782205254eSKarl Rupp 
1379c2093ab7SHong Zhang     ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&isMPIAIJ);CHKERRQ(ierr);
1380c2093ab7SHong Zhang 
1381c2093ab7SHong Zhang     /* distributed solution; Create x_seq=sol_loc for repeated use */
1382c2093ab7SHong Zhang     if (mumps->x_seq) {
1383c2093ab7SHong Zhang       ierr = VecScatterDestroy(&mumps->scat_sol);CHKERRQ(ierr);
1384c2093ab7SHong Zhang       ierr = PetscFree2(mumps->id.sol_loc,mumps->id.isol_loc);CHKERRQ(ierr);
1385c2093ab7SHong Zhang       ierr = VecDestroy(&mumps->x_seq);CHKERRQ(ierr);
1386c2093ab7SHong Zhang     }
1387a5e57a09SHong Zhang     lsol_loc = mumps->id.INFO(23); /* length of sol_loc */
1388dcca6d9dSJed Brown     ierr = PetscMalloc2(lsol_loc,&sol_loc,lsol_loc,&mumps->id.isol_loc);CHKERRQ(ierr);
1389a5e57a09SHong Zhang     mumps->id.lsol_loc = lsol_loc;
1390940cd9d6SSatish Balay     mumps->id.sol_loc = (MumpsScalar*)sol_loc;
1391a5e57a09SHong Zhang     ierr = VecCreateSeqWithArray(PETSC_COMM_SELF,1,lsol_loc,sol_loc,&mumps->x_seq);CHKERRQ(ierr);
139267877ebaSShri Abhyankar   }
13939880c9b4SStefano Zampini   ierr = PetscLogFlops(mumps->id.RINFO(2));CHKERRQ(ierr);
1394397b6df1SKris Buschelman   PetscFunctionReturn(0);
1395397b6df1SKris Buschelman }
1396397b6df1SKris Buschelman 
13979a2535b5SHong Zhang /* Sets MUMPS options from the options database */
13989a2535b5SHong Zhang PetscErrorCode PetscSetMUMPSFromOptions(Mat F, Mat A)
1399dcd589f8SShri Abhyankar {
1400e69c285eSBarry Smith   Mat_MUMPS      *mumps = (Mat_MUMPS*)F->data;
1401dcd589f8SShri Abhyankar   PetscErrorCode ierr;
1402a0e18203SThibaut Appel   PetscInt       icntl,info[80],i,ninfo=80;
1403ace3abfcSBarry Smith   PetscBool      flg;
1404dcd589f8SShri Abhyankar 
1405dcd589f8SShri Abhyankar   PetscFunctionBegin;
1406ce94432eSBarry Smith   ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MUMPS Options","Mat");CHKERRQ(ierr);
14079a2535b5SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_1","ICNTL(1): output stream for error messages","None",mumps->id.ICNTL(1),&icntl,&flg);CHKERRQ(ierr);
14089a2535b5SHong Zhang   if (flg) mumps->id.ICNTL(1) = icntl;
14099a2535b5SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_2","ICNTL(2): output stream for diagnostic printing, statistics, and warning","None",mumps->id.ICNTL(2),&icntl,&flg);CHKERRQ(ierr);
14109a2535b5SHong Zhang   if (flg) mumps->id.ICNTL(2) = icntl;
14119a2535b5SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_3","ICNTL(3): output stream for global information, collected on the host","None",mumps->id.ICNTL(3),&icntl,&flg);CHKERRQ(ierr);
14129a2535b5SHong Zhang   if (flg) mumps->id.ICNTL(3) = icntl;
1413dcd589f8SShri Abhyankar 
14149a2535b5SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_4","ICNTL(4): level of printing (0 to 4)","None",mumps->id.ICNTL(4),&icntl,&flg);CHKERRQ(ierr);
14159a2535b5SHong Zhang   if (flg) mumps->id.ICNTL(4) = icntl;
14169a2535b5SHong Zhang   if (mumps->id.ICNTL(4) || PetscLogPrintInfo) mumps->id.ICNTL(3) = 6; /* resume MUMPS default id.ICNTL(3) = 6 */
14179a2535b5SHong Zhang 
1418d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_6","ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7)","None",mumps->id.ICNTL(6),&icntl,&flg);CHKERRQ(ierr);
14199a2535b5SHong Zhang   if (flg) mumps->id.ICNTL(6) = icntl;
14209a2535b5SHong Zhang 
1421d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_7","ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis","None",mumps->id.ICNTL(7),&icntl,&flg);CHKERRQ(ierr);
1422dcd589f8SShri Abhyankar   if (flg) {
14232d4298aeSJunchao Zhang     if (icntl== 1 && mumps->petsc_size > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"pivot order be set by the user in PERM_IN -- not supported by the PETSc/MUMPS interface\n");
14242205254eSKarl Rupp     else mumps->id.ICNTL(7) = icntl;
1425dcd589f8SShri Abhyankar   }
1426e0b74bf9SHong Zhang 
14270298fd71SBarry Smith   ierr = PetscOptionsInt("-mat_mumps_icntl_8","ICNTL(8): scaling strategy (-2 to 8 or 77)","None",mumps->id.ICNTL(8),&mumps->id.ICNTL(8),NULL);CHKERRQ(ierr);
1428d341cd04SHong Zhang   /* ierr = PetscOptionsInt("-mat_mumps_icntl_9","ICNTL(9): computes the solution using A or A^T","None",mumps->id.ICNTL(9),&mumps->id.ICNTL(9),NULL);CHKERRQ(ierr); handled by MatSolveTranspose_MUMPS() */
14290298fd71SBarry Smith   ierr = PetscOptionsInt("-mat_mumps_icntl_10","ICNTL(10): max num of refinements","None",mumps->id.ICNTL(10),&mumps->id.ICNTL(10),NULL);CHKERRQ(ierr);
1430d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_11","ICNTL(11): statistics related to an error analysis (via -ksp_view)","None",mumps->id.ICNTL(11),&mumps->id.ICNTL(11),NULL);CHKERRQ(ierr);
1431d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_12","ICNTL(12): an ordering strategy for symmetric matrices (0 to 3)","None",mumps->id.ICNTL(12),&mumps->id.ICNTL(12),NULL);CHKERRQ(ierr);
1432d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_13","ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting","None",mumps->id.ICNTL(13),&mumps->id.ICNTL(13),NULL);CHKERRQ(ierr);
1433d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_14","ICNTL(14): percentage increase in the estimated working space","None",mumps->id.ICNTL(14),&mumps->id.ICNTL(14),NULL);CHKERRQ(ierr);
1434d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_19","ICNTL(19): computes the Schur complement","None",mumps->id.ICNTL(19),&mumps->id.ICNTL(19),NULL);CHKERRQ(ierr);
143559ac8732SStefano Zampini   if (mumps->id.ICNTL(19) <= 0 || mumps->id.ICNTL(19) > 3) { /* reset any schur data (if any) */
1436b3cb21ddSStefano Zampini     ierr = MatDestroy(&F->schur);CHKERRQ(ierr);
143759ac8732SStefano Zampini     ierr = MatMumpsResetSchur_Private(mumps);CHKERRQ(ierr);
143859ac8732SStefano Zampini   }
14394e34a73bSHong Zhang   /* ierr = PetscOptionsInt("-mat_mumps_icntl_20","ICNTL(20): the format (dense or sparse) of the right-hand sides","None",mumps->id.ICNTL(20),&mumps->id.ICNTL(20),NULL);CHKERRQ(ierr); -- sparse rhs is not supported in PETSc API */
1440d341cd04SHong Zhang   /* ierr = PetscOptionsInt("-mat_mumps_icntl_21","ICNTL(21): the distribution (centralized or distributed) of the solution vectors","None",mumps->id.ICNTL(21),&mumps->id.ICNTL(21),NULL);CHKERRQ(ierr); we only use distributed solution vector */
14419a2535b5SHong Zhang 
1442d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_22","ICNTL(22): in-core/out-of-core factorization and solve (0 or 1)","None",mumps->id.ICNTL(22),&mumps->id.ICNTL(22),NULL);CHKERRQ(ierr);
14430298fd71SBarry Smith   ierr = PetscOptionsInt("-mat_mumps_icntl_23","ICNTL(23): max size of the working memory (MB) that can allocate per processor","None",mumps->id.ICNTL(23),&mumps->id.ICNTL(23),NULL);CHKERRQ(ierr);
14440298fd71SBarry Smith   ierr = PetscOptionsInt("-mat_mumps_icntl_24","ICNTL(24): detection of null pivot rows (0 or 1)","None",mumps->id.ICNTL(24),&mumps->id.ICNTL(24),NULL);CHKERRQ(ierr);
14459a2535b5SHong Zhang   if (mumps->id.ICNTL(24)) {
14469a2535b5SHong Zhang     mumps->id.ICNTL(13) = 1; /* turn-off ScaLAPACK to help with the correct detection of null pivots */
1447d7ebd59bSHong Zhang   }
1448d7ebd59bSHong Zhang 
1449b4ed93dbSHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_25","ICNTL(25): computes a solution of a deficient matrix and a null space basis","None",mumps->id.ICNTL(25),&mumps->id.ICNTL(25),NULL);CHKERRQ(ierr);
1450d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_26","ICNTL(26): drives the solution phase if a Schur complement matrix","None",mumps->id.ICNTL(26),&mumps->id.ICNTL(26),NULL);CHKERRQ(ierr);
14512cd7d884SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_27","ICNTL(27): the blocking size for multiple right-hand sides","None",mumps->id.ICNTL(27),&mumps->id.ICNTL(27),NULL);CHKERRQ(ierr);
14520298fd71SBarry Smith   ierr = PetscOptionsInt("-mat_mumps_icntl_28","ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering","None",mumps->id.ICNTL(28),&mumps->id.ICNTL(28),NULL);CHKERRQ(ierr);
1453d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_29","ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis","None",mumps->id.ICNTL(29),&mumps->id.ICNTL(29),NULL);CHKERRQ(ierr);
145489a9c03aSHong Zhang   /* ierr = PetscOptionsInt("-mat_mumps_icntl_30","ICNTL(30): compute user-specified set of entries in inv(A)","None",mumps->id.ICNTL(30),&mumps->id.ICNTL(30),NULL);CHKERRQ(ierr); */ /* call MatMumpsGetInverse() directly */
1455d341cd04SHong Zhang   ierr = PetscOptionsInt("-mat_mumps_icntl_31","ICNTL(31): indicates which factors may be discarded during factorization","None",mumps->id.ICNTL(31),&mumps->id.ICNTL(31),NULL);CHKERRQ(ierr);
14564e34a73bSHong Zhang   /* ierr = PetscOptionsInt("-mat_mumps_icntl_32","ICNTL(32): performs the forward elemination of the right-hand sides during factorization","None",mumps->id.ICNTL(32),&mumps->id.ICNTL(32),NULL);CHKERRQ(ierr);  -- not supported by PETSc API */
14570298fd71SBarry Smith   ierr = PetscOptionsInt("-mat_mumps_icntl_33","ICNTL(33): compute determinant","None",mumps->id.ICNTL(33),&mumps->id.ICNTL(33),NULL);CHKERRQ(ierr);
1458a0e18203SThibaut Appel   ierr = PetscOptionsInt("-mat_mumps_icntl_35","ICNTL(35): activates Block Low Rank (BLR) based factorization","None",mumps->id.ICNTL(35),&mumps->id.ICNTL(35),NULL);CHKERRQ(ierr);
1459a0e18203SThibaut Appel   ierr = PetscOptionsInt("-mat_mumps_icntl_36","ICNTL(36): choice of BLR factorization variant","None",mumps->id.ICNTL(36),&mumps->id.ICNTL(36),NULL);CHKERRQ(ierr);
1460a0e18203SThibaut Appel   ierr = PetscOptionsInt("-mat_mumps_icntl_38","ICNTL(38): estimated compression rate of LU factors with BLR","None",mumps->id.ICNTL(38),&mumps->id.ICNTL(38),NULL);CHKERRQ(ierr);
1461dcd589f8SShri Abhyankar 
14620298fd71SBarry Smith   ierr = PetscOptionsReal("-mat_mumps_cntl_1","CNTL(1): relative pivoting threshold","None",mumps->id.CNTL(1),&mumps->id.CNTL(1),NULL);CHKERRQ(ierr);
14630298fd71SBarry Smith   ierr = PetscOptionsReal("-mat_mumps_cntl_2","CNTL(2): stopping criterion of refinement","None",mumps->id.CNTL(2),&mumps->id.CNTL(2),NULL);CHKERRQ(ierr);
14640298fd71SBarry Smith   ierr = PetscOptionsReal("-mat_mumps_cntl_3","CNTL(3): absolute pivoting threshold","None",mumps->id.CNTL(3),&mumps->id.CNTL(3),NULL);CHKERRQ(ierr);
14650298fd71SBarry Smith   ierr = PetscOptionsReal("-mat_mumps_cntl_4","CNTL(4): value for static pivoting","None",mumps->id.CNTL(4),&mumps->id.CNTL(4),NULL);CHKERRQ(ierr);
14660298fd71SBarry Smith   ierr = PetscOptionsReal("-mat_mumps_cntl_5","CNTL(5): fixation for null pivots","None",mumps->id.CNTL(5),&mumps->id.CNTL(5),NULL);CHKERRQ(ierr);
1467b4ed93dbSHong Zhang   ierr = PetscOptionsReal("-mat_mumps_cntl_7","CNTL(7): dropping parameter used during BLR","None",mumps->id.CNTL(7),&mumps->id.CNTL(7),NULL);CHKERRQ(ierr);
1468e5bb22a1SHong Zhang 
14692a808120SBarry Smith   ierr = PetscOptionsString("-mat_mumps_ooc_tmpdir", "out of core directory", "None", mumps->id.ooc_tmpdir, mumps->id.ooc_tmpdir, 256, NULL);CHKERRQ(ierr);
1470b34f08ffSHong Zhang 
147116d797efSHong Zhang   ierr = PetscOptionsIntArray("-mat_mumps_view_info","request INFO local to each processor","",info,&ninfo,NULL);CHKERRQ(ierr);
1472b34f08ffSHong Zhang   if (ninfo) {
1473a0e18203SThibaut Appel     if (ninfo > 80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"number of INFO %d must <= 80\n",ninfo);
1474b34f08ffSHong Zhang     ierr = PetscMalloc1(ninfo,&mumps->info);CHKERRQ(ierr);
1475b34f08ffSHong Zhang     mumps->ninfo = ninfo;
1476b34f08ffSHong Zhang     for (i=0; i<ninfo; i++) {
1477a0e18203SThibaut Appel       if (info[i] < 0 || info[i]>80) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_USER,"index of INFO %d must between 1 and 80\n",ninfo);
14782a808120SBarry Smith       else  mumps->info[i] = info[i];
1479b34f08ffSHong Zhang     }
1480b34f08ffSHong Zhang   }
1481b34f08ffSHong Zhang 
14822a808120SBarry Smith   ierr = PetscOptionsEnd();CHKERRQ(ierr);
1483dcd589f8SShri Abhyankar   PetscFunctionReturn(0);
1484dcd589f8SShri Abhyankar }
1485dcd589f8SShri Abhyankar 
1486f697e70eSHong Zhang PetscErrorCode PetscInitializeMUMPS(Mat A,Mat_MUMPS *mumps)
1487dcd589f8SShri Abhyankar {
1488dcd589f8SShri Abhyankar   PetscErrorCode ierr;
14897c405c4aSJunchao Zhang   PetscInt       nthreads=0;
1490dcd589f8SShri Abhyankar 
1491dcd589f8SShri Abhyankar   PetscFunctionBegin;
14923ab56b82SJunchao Zhang   mumps->petsc_comm = PetscObjectComm((PetscObject)A);
14933ab56b82SJunchao Zhang   ierr = MPI_Comm_size(mumps->petsc_comm,&mumps->petsc_size);CHKERRQ(ierr);
14943ab56b82SJunchao Zhang   ierr = MPI_Comm_rank(mumps->petsc_comm,&mumps->myid);CHKERRQ(ierr); /* so that code like "if (!myid)" still works even if mumps_comm is different */
14953ab56b82SJunchao Zhang 
14967c405c4aSJunchao Zhang   ierr = PetscOptionsHasName(NULL,NULL,"-mat_mumps_use_omp_threads",&mumps->use_petsc_omp_support);CHKERRQ(ierr);
14977c405c4aSJunchao Zhang   if (mumps->use_petsc_omp_support) nthreads = -1; /* -1 will let PetscOmpCtrlCreate() guess a proper value when user did not supply one */
14987c405c4aSJunchao Zhang   ierr = PetscOptionsGetInt(NULL,NULL,"-mat_mumps_use_omp_threads",&nthreads,NULL);CHKERRQ(ierr);
14993ab56b82SJunchao Zhang   if (mumps->use_petsc_omp_support) {
15003ab56b82SJunchao Zhang #if defined(PETSC_HAVE_OPENMP_SUPPORT)
15013ab56b82SJunchao Zhang     ierr = PetscOmpCtrlCreate(mumps->petsc_comm,nthreads,&mumps->omp_ctrl);CHKERRQ(ierr);
15023ab56b82SJunchao Zhang     ierr = PetscOmpCtrlGetOmpComms(mumps->omp_ctrl,&mumps->omp_comm,&mumps->mumps_comm,&mumps->is_omp_master);CHKERRQ(ierr);
15033ab56b82SJunchao Zhang #else
1504217d3b1eSJunchao Zhang     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP_SYS,"the system does not have PETSc OpenMP support but you added the -mat_mumps_use_omp_threads option. Configure PETSc with --with-openmp --download-hwloc (or --with-hwloc) to enable it, see more in MATSOLVERMUMPS manual\n");
15053ab56b82SJunchao Zhang #endif
15063ab56b82SJunchao Zhang   } else {
15073ab56b82SJunchao Zhang     mumps->omp_comm      = PETSC_COMM_SELF;
15083ab56b82SJunchao Zhang     mumps->mumps_comm    = mumps->petsc_comm;
15093ab56b82SJunchao Zhang     mumps->is_omp_master = PETSC_TRUE;
15103ab56b82SJunchao Zhang   }
15113ab56b82SJunchao Zhang   ierr = MPI_Comm_size(mumps->omp_comm,&mumps->omp_comm_size);CHKERRQ(ierr);
15122205254eSKarl Rupp 
15132d4298aeSJunchao Zhang   mumps->id.comm_fortran = MPI_Comm_c2f(mumps->mumps_comm);
1514f697e70eSHong Zhang   mumps->id.job = JOB_INIT;
1515f697e70eSHong Zhang   mumps->id.par = 1;  /* host participates factorizaton and solve */
1516f697e70eSHong Zhang   mumps->id.sym = mumps->sym;
15173ab56b82SJunchao Zhang 
15183ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
15193ab56b82SJunchao Zhang 
15203ab56b82SJunchao Zhang   /* copy MUMPS default control values from master to slaves. Although slaves do not call MUMPS, they may access these values in code.
15213ab56b82SJunchao Zhang      For example, ICNTL(9) is initialized to 1 by MUMPS and slaves check ICNTL(9) in MatSolve_MUMPS.
15223ab56b82SJunchao Zhang    */
1523a0e18203SThibaut Appel   ierr = MPI_Bcast(mumps->id.icntl,60,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 Manual Section 9 */
15243ab56b82SJunchao Zhang   ierr = MPI_Bcast(mumps->id.cntl, 15,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr);
1525f697e70eSHong Zhang 
15260298fd71SBarry Smith   mumps->scat_rhs     = NULL;
15270298fd71SBarry Smith   mumps->scat_sol     = NULL;
15289a2535b5SHong Zhang 
152970544d5fSHong Zhang   /* set PETSc-MUMPS default options - override MUMPS default */
15309a2535b5SHong Zhang   mumps->id.ICNTL(3) = 0;
15319a2535b5SHong Zhang   mumps->id.ICNTL(4) = 0;
15322d4298aeSJunchao Zhang   if (mumps->petsc_size == 1) {
15339a2535b5SHong Zhang     mumps->id.ICNTL(18) = 0;   /* centralized assembled matrix input */
15349a2535b5SHong Zhang   } else {
15359a2535b5SHong Zhang     mumps->id.ICNTL(18) = 3;   /* distributed assembled matrix input */
15364e34a73bSHong Zhang     mumps->id.ICNTL(20) = 0;   /* rhs is in dense format */
153770544d5fSHong Zhang     mumps->id.ICNTL(21) = 1;   /* distributed solution */
15389a2535b5SHong Zhang   }
15396444a565SStefano Zampini 
15406444a565SStefano Zampini   /* schur */
15416444a565SStefano Zampini   mumps->id.size_schur      = 0;
15426444a565SStefano Zampini   mumps->id.listvar_schur   = NULL;
15436444a565SStefano Zampini   mumps->id.schur           = NULL;
1544b5fa320bSStefano Zampini   mumps->sizeredrhs         = 0;
154559ac8732SStefano Zampini   mumps->schur_sol          = NULL;
154659ac8732SStefano Zampini   mumps->schur_sizesol      = 0;
1547dcd589f8SShri Abhyankar   PetscFunctionReturn(0);
1548dcd589f8SShri Abhyankar }
1549dcd589f8SShri Abhyankar 
15509a625307SHong Zhang PetscErrorCode MatFactorSymbolic_MUMPS_ReportIfError(Mat F,Mat A,const MatFactorInfo *info,Mat_MUMPS *mumps)
15515cd7cf9dSHong Zhang {
15525cd7cf9dSHong Zhang   PetscErrorCode ierr;
15535cd7cf9dSHong Zhang 
15545cd7cf9dSHong Zhang   PetscFunctionBegin;
1555a0e18203SThibaut Appel   ierr = MPI_Bcast(mumps->id.infog, 80,MPIU_INT, 0,mumps->omp_comm);CHKERRQ(ierr); /* see MUMPS-5.1.2 manual p82 */
15563ab56b82SJunchao Zhang   ierr = MPI_Bcast(mumps->id.rinfog,20,MPIU_REAL,0,mumps->omp_comm);CHKERRQ(ierr);
15575cd7cf9dSHong Zhang   if (mumps->id.INFOG(1) < 0) {
15585cd7cf9dSHong Zhang     if (A->erroriffailure) {
15595cd7cf9dSHong Zhang       SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in analysis phase: INFOG(1)=%d\n",mumps->id.INFOG(1));
15605cd7cf9dSHong Zhang     } else {
15615cd7cf9dSHong Zhang       if (mumps->id.INFOG(1) == -6) {
15625cd7cf9dSHong Zhang         ierr = PetscInfo2(F,"matrix is singular in structure, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1563603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_STRUCT_ZEROPIVOT;
15645cd7cf9dSHong Zhang       } else if (mumps->id.INFOG(1) == -5 || mumps->id.INFOG(1) == -7) {
15655cd7cf9dSHong Zhang         ierr = PetscInfo2(F,"problem of workspace, INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1566603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_OUTMEMORY;
15675cd7cf9dSHong Zhang       } else {
15685cd7cf9dSHong Zhang         ierr = PetscInfo2(F,"Error reported by MUMPS in analysis phase: INFOG(1)=%d, INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));CHKERRQ(ierr);
1569603e8f96SBarry Smith         F->factorerrortype = MAT_FACTOR_OTHER;
15705cd7cf9dSHong Zhang       }
15715cd7cf9dSHong Zhang     }
15725cd7cf9dSHong Zhang   }
15735cd7cf9dSHong Zhang   PetscFunctionReturn(0);
15745cd7cf9dSHong Zhang }
15755cd7cf9dSHong Zhang 
1576a5e57a09SHong Zhang /* Note Petsc r(=c) permutation is used when mumps->id.ICNTL(7)==1 with centralized assembled matrix input; otherwise r and c are ignored */
15770481f469SBarry Smith PetscErrorCode MatLUFactorSymbolic_AIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info)
1578b24902e0SBarry Smith {
1579e69c285eSBarry Smith   Mat_MUMPS      *mumps = (Mat_MUMPS*)F->data;
1580dcd589f8SShri Abhyankar   PetscErrorCode ierr;
158167877ebaSShri Abhyankar   Vec            b;
158267877ebaSShri Abhyankar   const PetscInt M = A->rmap->N;
1583397b6df1SKris Buschelman 
1584397b6df1SKris Buschelman   PetscFunctionBegin;
1585a5e57a09SHong Zhang   mumps->matstruc = DIFFERENT_NONZERO_PATTERN;
1586dcd589f8SShri Abhyankar 
15879a2535b5SHong Zhang   /* Set MUMPS options from the options database */
15889a2535b5SHong Zhang   ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr);
1589dcd589f8SShri Abhyankar 
1590a5e57a09SHong Zhang   ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr);
15913ab56b82SJunchao Zhang   ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr);
1592dcd589f8SShri Abhyankar 
159367877ebaSShri Abhyankar   /* analysis phase */
159467877ebaSShri Abhyankar   /*----------------*/
1595a5e57a09SHong Zhang   mumps->id.job = JOB_FACTSYMBOLIC;
1596a5e57a09SHong Zhang   mumps->id.n   = M;
1597a5e57a09SHong Zhang   switch (mumps->id.ICNTL(18)) {
159867877ebaSShri Abhyankar   case 0:  /* centralized assembled matrix input */
1599a5e57a09SHong Zhang     if (!mumps->myid) {
1600a5e57a09SHong Zhang       mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn;
1601a5e57a09SHong Zhang       if (mumps->id.ICNTL(6)>1) {
1602940cd9d6SSatish Balay         mumps->id.a = (MumpsScalar*)mumps->val;
160367877ebaSShri Abhyankar       }
1604a5e57a09SHong Zhang       if (mumps->id.ICNTL(7) == 1) { /* use user-provide matrix ordering - assuming r = c ordering */
16055248a706SHong Zhang         /*
16065248a706SHong Zhang         PetscBool      flag;
16075248a706SHong Zhang         ierr = ISEqual(r,c,&flag);CHKERRQ(ierr);
16085248a706SHong Zhang         if (!flag) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_USER,"row_perm != col_perm");
16095248a706SHong Zhang         ierr = ISView(r,PETSC_VIEWER_STDOUT_SELF);
16105248a706SHong Zhang          */
1611a5e57a09SHong Zhang         if (!mumps->myid) {
1612e0b74bf9SHong Zhang           const PetscInt *idx;
1613e0b74bf9SHong Zhang           PetscInt       i,*perm_in;
16142205254eSKarl Rupp 
1615785e854fSJed Brown           ierr = PetscMalloc1(M,&perm_in);CHKERRQ(ierr);
1616e0b74bf9SHong Zhang           ierr = ISGetIndices(r,&idx);CHKERRQ(ierr);
16172205254eSKarl Rupp 
1618a5e57a09SHong Zhang           mumps->id.perm_in = perm_in;
1619e0b74bf9SHong Zhang           for (i=0; i<M; i++) perm_in[i] = idx[i]+1; /* perm_in[]: start from 1, not 0! */
1620e0b74bf9SHong Zhang           ierr = ISRestoreIndices(r,&idx);CHKERRQ(ierr);
1621e0b74bf9SHong Zhang         }
1622e0b74bf9SHong Zhang       }
162367877ebaSShri Abhyankar     }
162467877ebaSShri Abhyankar     break;
162567877ebaSShri Abhyankar   case 3:  /* distributed assembled matrix input (size>1) */
1626a5e57a09SHong Zhang     mumps->id.nz_loc = mumps->nz;
1627a5e57a09SHong Zhang     mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn;
1628a5e57a09SHong Zhang     if (mumps->id.ICNTL(6)>1) {
1629940cd9d6SSatish Balay       mumps->id.a_loc = (MumpsScalar*)mumps->val;
163067877ebaSShri Abhyankar     }
163167877ebaSShri Abhyankar     /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */
16322a7a6963SBarry Smith     ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr);
163394b42a18SJunchao Zhang     ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr);
16346bf464f9SBarry Smith     ierr = VecDestroy(&b);CHKERRQ(ierr);
163567877ebaSShri Abhyankar     break;
163667877ebaSShri Abhyankar   }
16373ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
16385cd7cf9dSHong Zhang   ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr);
163967877ebaSShri Abhyankar 
1640719d5645SBarry Smith   F->ops->lufactornumeric = MatFactorNumeric_MUMPS;
1641dcd589f8SShri Abhyankar   F->ops->solve           = MatSolve_MUMPS;
164251d5961aSHong Zhang   F->ops->solvetranspose  = MatSolveTranspose_MUMPS;
16434e34a73bSHong Zhang   F->ops->matsolve        = MatMatSolve_MUMPS;
1644eb3ef3b2SHong Zhang   F->ops->mattransposesolve = MatMatTransposeSolve_MUMPS;
1645b24902e0SBarry Smith   PetscFunctionReturn(0);
1646b24902e0SBarry Smith }
1647b24902e0SBarry Smith 
1648450b117fSShri Abhyankar /* Note the Petsc r and c permutations are ignored */
1649450b117fSShri Abhyankar PetscErrorCode MatLUFactorSymbolic_BAIJMUMPS(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info)
1650450b117fSShri Abhyankar {
1651e69c285eSBarry Smith   Mat_MUMPS      *mumps = (Mat_MUMPS*)F->data;
1652dcd589f8SShri Abhyankar   PetscErrorCode ierr;
165367877ebaSShri Abhyankar   Vec            b;
165467877ebaSShri Abhyankar   const PetscInt M = A->rmap->N;
1655450b117fSShri Abhyankar 
1656450b117fSShri Abhyankar   PetscFunctionBegin;
1657a5e57a09SHong Zhang   mumps->matstruc = DIFFERENT_NONZERO_PATTERN;
1658dcd589f8SShri Abhyankar 
16599a2535b5SHong Zhang   /* Set MUMPS options from the options database */
16609a2535b5SHong Zhang   ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr);
1661dcd589f8SShri Abhyankar 
1662a5e57a09SHong Zhang   ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr);
16633ab56b82SJunchao Zhang   ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr);
166467877ebaSShri Abhyankar 
166567877ebaSShri Abhyankar   /* analysis phase */
166667877ebaSShri Abhyankar   /*----------------*/
1667a5e57a09SHong Zhang   mumps->id.job = JOB_FACTSYMBOLIC;
1668a5e57a09SHong Zhang   mumps->id.n   = M;
1669a5e57a09SHong Zhang   switch (mumps->id.ICNTL(18)) {
167067877ebaSShri Abhyankar   case 0:  /* centralized assembled matrix input */
1671a5e57a09SHong Zhang     if (!mumps->myid) {
1672a5e57a09SHong Zhang       mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn;
1673a5e57a09SHong Zhang       if (mumps->id.ICNTL(6)>1) {
1674940cd9d6SSatish Balay         mumps->id.a = (MumpsScalar*)mumps->val;
167567877ebaSShri Abhyankar       }
167667877ebaSShri Abhyankar     }
167767877ebaSShri Abhyankar     break;
167867877ebaSShri Abhyankar   case 3:  /* distributed assembled matrix input (size>1) */
1679a5e57a09SHong Zhang     mumps->id.nz_loc = mumps->nz;
1680a5e57a09SHong Zhang     mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn;
1681a5e57a09SHong Zhang     if (mumps->id.ICNTL(6)>1) {
1682940cd9d6SSatish Balay       mumps->id.a_loc = (MumpsScalar*)mumps->val;
168367877ebaSShri Abhyankar     }
168467877ebaSShri Abhyankar     /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */
16852a7a6963SBarry Smith     ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr);
168694b42a18SJunchao Zhang     ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr);
16876bf464f9SBarry Smith     ierr = VecDestroy(&b);CHKERRQ(ierr);
168867877ebaSShri Abhyankar     break;
168967877ebaSShri Abhyankar   }
16903ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
16915cd7cf9dSHong Zhang   ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr);
169267877ebaSShri Abhyankar 
1693450b117fSShri Abhyankar   F->ops->lufactornumeric = MatFactorNumeric_MUMPS;
1694dcd589f8SShri Abhyankar   F->ops->solve           = MatSolve_MUMPS;
169551d5961aSHong Zhang   F->ops->solvetranspose  = MatSolveTranspose_MUMPS;
1696450b117fSShri Abhyankar   PetscFunctionReturn(0);
1697450b117fSShri Abhyankar }
1698b24902e0SBarry Smith 
1699141f4205SHong Zhang /* Note the Petsc r permutation and factor info are ignored */
170067877ebaSShri Abhyankar PetscErrorCode MatCholeskyFactorSymbolic_MUMPS(Mat F,Mat A,IS r,const MatFactorInfo *info)
1701b24902e0SBarry Smith {
1702e69c285eSBarry Smith   Mat_MUMPS      *mumps = (Mat_MUMPS*)F->data;
1703dcd589f8SShri Abhyankar   PetscErrorCode ierr;
170467877ebaSShri Abhyankar   Vec            b;
170567877ebaSShri Abhyankar   const PetscInt M = A->rmap->N;
1706397b6df1SKris Buschelman 
1707397b6df1SKris Buschelman   PetscFunctionBegin;
1708a5e57a09SHong Zhang   mumps->matstruc = DIFFERENT_NONZERO_PATTERN;
1709dcd589f8SShri Abhyankar 
17109a2535b5SHong Zhang   /* Set MUMPS options from the options database */
17119a2535b5SHong Zhang   ierr = PetscSetMUMPSFromOptions(F,A);CHKERRQ(ierr);
1712dcd589f8SShri Abhyankar 
1713a5e57a09SHong Zhang   ierr = (*mumps->ConvertToTriples)(A, 1, MAT_INITIAL_MATRIX, &mumps->nz, &mumps->irn, &mumps->jcn, &mumps->val);CHKERRQ(ierr);
17143ab56b82SJunchao Zhang   ierr = MatMumpsGatherNonzerosOnMaster(MAT_INITIAL_MATRIX,mumps);CHKERRQ(ierr);
1715dcd589f8SShri Abhyankar 
171667877ebaSShri Abhyankar   /* analysis phase */
171767877ebaSShri Abhyankar   /*----------------*/
1718a5e57a09SHong Zhang   mumps->id.job = JOB_FACTSYMBOLIC;
1719a5e57a09SHong Zhang   mumps->id.n   = M;
1720a5e57a09SHong Zhang   switch (mumps->id.ICNTL(18)) {
172167877ebaSShri Abhyankar   case 0:  /* centralized assembled matrix input */
1722a5e57a09SHong Zhang     if (!mumps->myid) {
1723a5e57a09SHong Zhang       mumps->id.nz =mumps->nz; mumps->id.irn=mumps->irn; mumps->id.jcn=mumps->jcn;
1724a5e57a09SHong Zhang       if (mumps->id.ICNTL(6)>1) {
1725940cd9d6SSatish Balay         mumps->id.a = (MumpsScalar*)mumps->val;
172667877ebaSShri Abhyankar       }
172767877ebaSShri Abhyankar     }
172867877ebaSShri Abhyankar     break;
172967877ebaSShri Abhyankar   case 3:  /* distributed assembled matrix input (size>1) */
1730a5e57a09SHong Zhang     mumps->id.nz_loc = mumps->nz;
1731a5e57a09SHong Zhang     mumps->id.irn_loc=mumps->irn; mumps->id.jcn_loc=mumps->jcn;
1732a5e57a09SHong Zhang     if (mumps->id.ICNTL(6)>1) {
1733940cd9d6SSatish Balay       mumps->id.a_loc = (MumpsScalar*)mumps->val;
173467877ebaSShri Abhyankar     }
173567877ebaSShri Abhyankar     /* MUMPS only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */
17362a7a6963SBarry Smith     ierr = MatCreateVecs(A,NULL,&b);CHKERRQ(ierr);
173794b42a18SJunchao Zhang     ierr = VecScatterCreateToZero(b,&mumps->scat_rhs,&mumps->b_seq);CHKERRQ(ierr);
17386bf464f9SBarry Smith     ierr = VecDestroy(&b);CHKERRQ(ierr);
173967877ebaSShri Abhyankar     break;
174067877ebaSShri Abhyankar   }
17413ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
17425cd7cf9dSHong Zhang   ierr = MatFactorSymbolic_MUMPS_ReportIfError(F,A,info,mumps);CHKERRQ(ierr);
17435cd7cf9dSHong Zhang 
17442792810eSHong Zhang   F->ops->choleskyfactornumeric = MatFactorNumeric_MUMPS;
1745dcd589f8SShri Abhyankar   F->ops->solve                 = MatSolve_MUMPS;
174651d5961aSHong Zhang   F->ops->solvetranspose        = MatSolve_MUMPS;
17474e34a73bSHong Zhang   F->ops->matsolve              = MatMatSolve_MUMPS;
174823a5080aSHong Zhang   F->ops->mattransposesolve     = MatMatTransposeSolve_MUMPS;
17494e34a73bSHong Zhang #if defined(PETSC_USE_COMPLEX)
17500298fd71SBarry Smith   F->ops->getinertia = NULL;
17514e34a73bSHong Zhang #else
17524e34a73bSHong Zhang   F->ops->getinertia = MatGetInertia_SBAIJMUMPS;
1753db4efbfdSBarry Smith #endif
1754b24902e0SBarry Smith   PetscFunctionReturn(0);
1755b24902e0SBarry Smith }
1756b24902e0SBarry Smith 
175764e6c443SBarry Smith PetscErrorCode MatView_MUMPS(Mat A,PetscViewer viewer)
175874ed9c26SBarry Smith {
1759f6c57405SHong Zhang   PetscErrorCode    ierr;
176064e6c443SBarry Smith   PetscBool         iascii;
176164e6c443SBarry Smith   PetscViewerFormat format;
1762e69c285eSBarry Smith   Mat_MUMPS         *mumps=(Mat_MUMPS*)A->data;
1763f6c57405SHong Zhang 
1764f6c57405SHong Zhang   PetscFunctionBegin;
176564e6c443SBarry Smith   /* check if matrix is mumps type */
176664e6c443SBarry Smith   if (A->ops->solve != MatSolve_MUMPS) PetscFunctionReturn(0);
176764e6c443SBarry Smith 
1768251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
176964e6c443SBarry Smith   if (iascii) {
177064e6c443SBarry Smith     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
177164e6c443SBarry Smith     if (format == PETSC_VIEWER_ASCII_INFO) {
177264e6c443SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"MUMPS run parameters:\n");CHKERRQ(ierr);
1773a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  SYM (matrix type):                   %d \n",mumps->id.sym);CHKERRQ(ierr);
1774a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  PAR (host participation):            %d \n",mumps->id.par);CHKERRQ(ierr);
1775a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(1) (output for error):         %d \n",mumps->id.ICNTL(1));CHKERRQ(ierr);
1776a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(2) (output of diagnostic msg): %d \n",mumps->id.ICNTL(2));CHKERRQ(ierr);
1777a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(3) (output for global info):   %d \n",mumps->id.ICNTL(3));CHKERRQ(ierr);
1778a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(4) (level of printing):        %d \n",mumps->id.ICNTL(4));CHKERRQ(ierr);
1779a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(5) (input mat struct):         %d \n",mumps->id.ICNTL(5));CHKERRQ(ierr);
1780a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(6) (matrix prescaling):        %d \n",mumps->id.ICNTL(6));CHKERRQ(ierr);
1781d4ed72bbSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(7) (sequential matrix ordering):%d \n",mumps->id.ICNTL(7));CHKERRQ(ierr);
1782d4ed72bbSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(8) (scaling strategy):        %d \n",mumps->id.ICNTL(8));CHKERRQ(ierr);
1783a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(10) (max num of refinements):  %d \n",mumps->id.ICNTL(10));CHKERRQ(ierr);
1784a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(11) (error analysis):          %d \n",mumps->id.ICNTL(11));CHKERRQ(ierr);
1785a5e57a09SHong Zhang       if (mumps->id.ICNTL(11)>0) {
1786a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"    RINFOG(4) (inf norm of input mat):        %g\n",mumps->id.RINFOG(4));CHKERRQ(ierr);
1787a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"    RINFOG(5) (inf norm of solution):         %g\n",mumps->id.RINFOG(5));CHKERRQ(ierr);
1788a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"    RINFOG(6) (inf norm of residual):         %g\n",mumps->id.RINFOG(6));CHKERRQ(ierr);
1789a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"    RINFOG(7),RINFOG(8) (backward error est): %g, %g\n",mumps->id.RINFOG(7),mumps->id.RINFOG(8));CHKERRQ(ierr);
1790a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"    RINFOG(9) (error estimate):               %g \n",mumps->id.RINFOG(9));CHKERRQ(ierr);
1791a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"    RINFOG(10),RINFOG(11)(condition numbers): %g, %g\n",mumps->id.RINFOG(10),mumps->id.RINFOG(11));CHKERRQ(ierr);
1792f6c57405SHong Zhang       }
1793a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(12) (efficiency control):                         %d \n",mumps->id.ICNTL(12));CHKERRQ(ierr);
1794a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(13) (efficiency control):                         %d \n",mumps->id.ICNTL(13));CHKERRQ(ierr);
1795a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(14) (percentage of estimated workspace increase): %d \n",mumps->id.ICNTL(14));CHKERRQ(ierr);
1796f6c57405SHong Zhang       /* ICNTL(15-17) not used */
1797a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(18) (input mat struct):                           %d \n",mumps->id.ICNTL(18));CHKERRQ(ierr);
1798d4ed72bbSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(19) (Schur complement info):                      %d \n",mumps->id.ICNTL(19));CHKERRQ(ierr);
1799a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(20) (rhs sparse pattern):                         %d \n",mumps->id.ICNTL(20));CHKERRQ(ierr);
1800ca3dc52bSPierre Jolivet       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(21) (solution struct):                            %d \n",mumps->id.ICNTL(21));CHKERRQ(ierr);
1801a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(22) (in-core/out-of-core facility):               %d \n",mumps->id.ICNTL(22));CHKERRQ(ierr);
1802a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(23) (max size of memory can be allocated locally):%d \n",mumps->id.ICNTL(23));CHKERRQ(ierr);
1803c0165424SHong Zhang 
1804a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(24) (detection of null pivot rows):               %d \n",mumps->id.ICNTL(24));CHKERRQ(ierr);
1805a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(25) (computation of a null space basis):          %d \n",mumps->id.ICNTL(25));CHKERRQ(ierr);
1806a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(26) (Schur options for rhs or solution):          %d \n",mumps->id.ICNTL(26));CHKERRQ(ierr);
1807a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(27) (experimental parameter):                     %d \n",mumps->id.ICNTL(27));CHKERRQ(ierr);
1808a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(28) (use parallel or sequential ordering):        %d \n",mumps->id.ICNTL(28));CHKERRQ(ierr);
1809a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(29) (parallel ordering):                          %d \n",mumps->id.ICNTL(29));CHKERRQ(ierr);
181042179a6aSHong Zhang 
1811a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(30) (user-specified set of entries in inv(A)):    %d \n",mumps->id.ICNTL(30));CHKERRQ(ierr);
1812a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(31) (factors is discarded in the solve phase):    %d \n",mumps->id.ICNTL(31));CHKERRQ(ierr);
1813a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(33) (compute determinant):                        %d \n",mumps->id.ICNTL(33));CHKERRQ(ierr);
18146e32de5dSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(35) (activate BLR based factorization):           %d \n",mumps->id.ICNTL(35));CHKERRQ(ierr);
1815a0e18203SThibaut Appel       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(36) (choice of BLR factorization variant):        %d \n",mumps->id.ICNTL(36));CHKERRQ(ierr);
1816a0e18203SThibaut Appel       ierr = PetscViewerASCIIPrintf(viewer,"  ICNTL(38) (estimated compression rate of LU factors):   %d \n",mumps->id.ICNTL(38));CHKERRQ(ierr);
1817f6c57405SHong Zhang 
1818a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  CNTL(1) (relative pivoting threshold):      %g \n",mumps->id.CNTL(1));CHKERRQ(ierr);
1819a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  CNTL(2) (stopping criterion of refinement): %g \n",mumps->id.CNTL(2));CHKERRQ(ierr);
1820ca3dc52bSPierre Jolivet       ierr = PetscViewerASCIIPrintf(viewer,"  CNTL(3) (absolute pivoting threshold):      %g \n",mumps->id.CNTL(3));CHKERRQ(ierr);
1821ca3dc52bSPierre Jolivet       ierr = PetscViewerASCIIPrintf(viewer,"  CNTL(4) (value of static pivoting):         %g \n",mumps->id.CNTL(4));CHKERRQ(ierr);
1822a5e57a09SHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  CNTL(5) (fixation for null pivots):         %g \n",mumps->id.CNTL(5));CHKERRQ(ierr);
18236e32de5dSHong Zhang       ierr = PetscViewerASCIIPrintf(viewer,"  CNTL(7) (dropping parameter for BLR):       %g \n",mumps->id.CNTL(7));CHKERRQ(ierr);
1824f6c57405SHong Zhang 
1825f6c57405SHong Zhang       /* infomation local to each processor */
182634ed7027SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer, "  RINFO(1) (local estimated flops for the elimination after analysis): \n");CHKERRQ(ierr);
18271575c14dSBarry Smith       ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr);
1828a5e57a09SHong Zhang       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"    [%d] %g \n",mumps->myid,mumps->id.RINFO(1));CHKERRQ(ierr);
18292a808120SBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
183034ed7027SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer, "  RINFO(2) (local estimated flops for the assembly after factorization): \n");CHKERRQ(ierr);
1831a5e57a09SHong Zhang       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"    [%d]  %g \n",mumps->myid,mumps->id.RINFO(2));CHKERRQ(ierr);
18322a808120SBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
183334ed7027SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer, "  RINFO(3) (local estimated flops for the elimination after factorization): \n");CHKERRQ(ierr);
1834a5e57a09SHong Zhang       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"    [%d]  %g \n",mumps->myid,mumps->id.RINFO(3));CHKERRQ(ierr);
18352a808120SBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
1836f6c57405SHong Zhang 
183734ed7027SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer, "  INFO(15) (estimated size of (in MB) MUMPS internal data for running numerical factorization): \n");CHKERRQ(ierr);
1838a5e57a09SHong Zhang       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"  [%d] %d \n",mumps->myid,mumps->id.INFO(15));CHKERRQ(ierr);
18392a808120SBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
1840f6c57405SHong Zhang 
184134ed7027SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer, "  INFO(16) (size of (in MB) MUMPS internal data used during numerical factorization): \n");CHKERRQ(ierr);
1842a5e57a09SHong Zhang       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"    [%d] %d \n",mumps->myid,mumps->id.INFO(16));CHKERRQ(ierr);
18432a808120SBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
1844f6c57405SHong Zhang 
184534ed7027SBarry Smith       ierr = PetscViewerASCIIPrintf(viewer, "  INFO(23) (num of pivots eliminated on this processor after factorization): \n");CHKERRQ(ierr);
1846a5e57a09SHong Zhang       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"    [%d] %d \n",mumps->myid,mumps->id.INFO(23));CHKERRQ(ierr);
18472a808120SBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
1848b34f08ffSHong Zhang 
1849a0e18203SThibaut Appel       if (mumps->ninfo && mumps->ninfo <= 80){
1850b34f08ffSHong Zhang         PetscInt i;
1851b34f08ffSHong Zhang         for (i=0; i<mumps->ninfo; i++){
1852b34f08ffSHong Zhang           ierr = PetscViewerASCIIPrintf(viewer, "  INFO(%d): \n",mumps->info[i]);CHKERRQ(ierr);
1853b34f08ffSHong Zhang           ierr = PetscViewerASCIISynchronizedPrintf(viewer,"    [%d] %d \n",mumps->myid,mumps->id.INFO(mumps->info[i]));CHKERRQ(ierr);
18542a808120SBarry Smith           ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
1855b34f08ffSHong Zhang         }
1856b34f08ffSHong Zhang       }
18571575c14dSBarry Smith       ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr);
1858f6c57405SHong Zhang 
1859a5e57a09SHong Zhang       if (!mumps->myid) { /* information from the host */
1860a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  RINFOG(1) (global estimated flops for the elimination after analysis): %g \n",mumps->id.RINFOG(1));CHKERRQ(ierr);
1861a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  RINFOG(2) (global estimated flops for the assembly after factorization): %g \n",mumps->id.RINFOG(2));CHKERRQ(ierr);
1862a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  RINFOG(3) (global estimated flops for the elimination after factorization): %g \n",mumps->id.RINFOG(3));CHKERRQ(ierr);
1863a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  (RINFOG(12) RINFOG(13))*2^INFOG(34) (determinant): (%g,%g)*(2^%d)\n",mumps->id.RINFOG(12),mumps->id.RINFOG(13),mumps->id.INFOG(34));CHKERRQ(ierr);
1864f6c57405SHong Zhang 
1865a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(3) (estimated real workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(3));CHKERRQ(ierr);
1866a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(4) (estimated integer workspace for factors on all processors after analysis): %d \n",mumps->id.INFOG(4));CHKERRQ(ierr);
1867a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(5) (estimated maximum front size in the complete tree): %d \n",mumps->id.INFOG(5));CHKERRQ(ierr);
1868a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(6) (number of nodes in the complete tree): %d \n",mumps->id.INFOG(6));CHKERRQ(ierr);
1869a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(7) (ordering option effectively use after analysis): %d \n",mumps->id.INFOG(7));CHKERRQ(ierr);
1870a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(8) (structural symmetry in percent of the permuted matrix after analysis): %d \n",mumps->id.INFOG(8));CHKERRQ(ierr);
1871a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(9) (total real/complex workspace to store the matrix factors after factorization): %d \n",mumps->id.INFOG(9));CHKERRQ(ierr);
1872a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(10) (total integer space store the matrix factors after factorization): %d \n",mumps->id.INFOG(10));CHKERRQ(ierr);
1873a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(11) (order of largest frontal matrix after factorization): %d \n",mumps->id.INFOG(11));CHKERRQ(ierr);
1874a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(12) (number of off-diagonal pivots): %d \n",mumps->id.INFOG(12));CHKERRQ(ierr);
1875a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(13) (number of delayed pivots after factorization): %d \n",mumps->id.INFOG(13));CHKERRQ(ierr);
1876a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(14) (number of memory compress after factorization): %d \n",mumps->id.INFOG(14));CHKERRQ(ierr);
1877a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(15) (number of steps of iterative refinement after solution): %d \n",mumps->id.INFOG(15));CHKERRQ(ierr);
1878a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(16) (estimated size (in MB) of all MUMPS internal data for factorization after analysis: value on the most memory consuming processor): %d \n",mumps->id.INFOG(16));CHKERRQ(ierr);
1879a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(17) (estimated size of all MUMPS internal data for factorization after analysis: sum over all processors): %d \n",mumps->id.INFOG(17));CHKERRQ(ierr);
1880a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(18) (size of all MUMPS internal data allocated during factorization: value on the most memory consuming processor): %d \n",mumps->id.INFOG(18));CHKERRQ(ierr);
1881a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(19) (size of all MUMPS internal data allocated during factorization: sum over all processors): %d \n",mumps->id.INFOG(19));CHKERRQ(ierr);
1882a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(20) (estimated number of entries in the factors): %d \n",mumps->id.INFOG(20));CHKERRQ(ierr);
1883a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(21) (size in MB of memory effectively used during factorization - value on the most memory consuming processor): %d \n",mumps->id.INFOG(21));CHKERRQ(ierr);
1884a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(22) (size in MB of memory effectively used during factorization - sum over all processors): %d \n",mumps->id.INFOG(22));CHKERRQ(ierr);
1885a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(23) (after analysis: value of ICNTL(6) effectively used): %d \n",mumps->id.INFOG(23));CHKERRQ(ierr);
1886a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(24) (after analysis: value of ICNTL(12) effectively used): %d \n",mumps->id.INFOG(24));CHKERRQ(ierr);
1887a5e57a09SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(25) (after factorization: number of pivots modified by static pivoting): %d \n",mumps->id.INFOG(25));CHKERRQ(ierr);
188840d435e3SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(28) (after factorization: number of null pivots encountered): %d\n",mumps->id.INFOG(28));CHKERRQ(ierr);
188940d435e3SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(29) (after factorization: effective number of entries in the factors (sum over all processors)): %d\n",mumps->id.INFOG(29));CHKERRQ(ierr);
189040d435e3SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(30, 31) (after solution: size in Mbytes of memory used during solution phase): %d, %d\n",mumps->id.INFOG(30),mumps->id.INFOG(31));CHKERRQ(ierr);
189140d435e3SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(32) (after analysis: type of analysis done): %d\n",mumps->id.INFOG(32));CHKERRQ(ierr);
189240d435e3SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(33) (value used for ICNTL(8)): %d\n",mumps->id.INFOG(33));CHKERRQ(ierr);
189340d435e3SHong Zhang         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(34) (exponent of the determinant if determinant is requested): %d\n",mumps->id.INFOG(34));CHKERRQ(ierr);
1894a0e18203SThibaut Appel         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(35) (after factorization: number of entries taking into account BLR factor compression - sum over all processors): %d\n",mumps->id.INFOG(35));CHKERRQ(ierr);
1895a0e18203SThibaut Appel         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(36) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(36));CHKERRQ(ierr);
1896a0e18203SThibaut Appel         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(37) (after analysis: estimated size of all MUMPS internal data for running BLR in-core - sum over all processors): %d \n",mumps->id.INFOG(37));CHKERRQ(ierr);
1897a0e18203SThibaut Appel         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(38) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - value on the most memory consuming processor): %d \n",mumps->id.INFOG(38));CHKERRQ(ierr);
1898a0e18203SThibaut Appel         ierr = PetscViewerASCIIPrintf(viewer,"  INFOG(39) (after analysis: estimated size of all MUMPS internal data for running BLR out-of-core - sum over all processors): %d \n",mumps->id.INFOG(39));CHKERRQ(ierr);
1899f6c57405SHong Zhang       }
1900f6c57405SHong Zhang     }
1901cb828f0fSHong Zhang   }
1902f6c57405SHong Zhang   PetscFunctionReturn(0);
1903f6c57405SHong Zhang }
1904f6c57405SHong Zhang 
190535bd34faSBarry Smith PetscErrorCode MatGetInfo_MUMPS(Mat A,MatInfoType flag,MatInfo *info)
190635bd34faSBarry Smith {
1907e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)A->data;
190835bd34faSBarry Smith 
190935bd34faSBarry Smith   PetscFunctionBegin;
191035bd34faSBarry Smith   info->block_size        = 1.0;
1911cb828f0fSHong Zhang   info->nz_allocated      = mumps->id.INFOG(20);
1912cb828f0fSHong Zhang   info->nz_used           = mumps->id.INFOG(20);
191335bd34faSBarry Smith   info->nz_unneeded       = 0.0;
191435bd34faSBarry Smith   info->assemblies        = 0.0;
191535bd34faSBarry Smith   info->mallocs           = 0.0;
191635bd34faSBarry Smith   info->memory            = 0.0;
191735bd34faSBarry Smith   info->fill_ratio_given  = 0;
191835bd34faSBarry Smith   info->fill_ratio_needed = 0;
191935bd34faSBarry Smith   info->factor_mallocs    = 0;
192035bd34faSBarry Smith   PetscFunctionReturn(0);
192135bd34faSBarry Smith }
192235bd34faSBarry Smith 
19235ccb76cbSHong Zhang /* -------------------------------------------------------------------------------------------*/
19248e7ba810SStefano Zampini PetscErrorCode MatFactorSetSchurIS_MUMPS(Mat F, IS is)
19256444a565SStefano Zampini {
1926e69c285eSBarry Smith   Mat_MUMPS      *mumps =(Mat_MUMPS*)F->data;
19278e7ba810SStefano Zampini   const PetscInt *idxs;
19288e7ba810SStefano Zampini   PetscInt       size,i;
19296444a565SStefano Zampini   PetscErrorCode ierr;
19306444a565SStefano Zampini 
19316444a565SStefano Zampini   PetscFunctionBegin;
1932b3cb21ddSStefano Zampini   ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr);
19332d4298aeSJunchao Zhang   if (mumps->petsc_size > 1) {
19343ab56b82SJunchao Zhang     PetscBool ls,gs; /* gs is false if any rank other than root has non-empty IS */
1935241dbb5eSStefano Zampini 
19363ab56b82SJunchao Zhang     ls   = mumps->myid ? (size ? PETSC_FALSE : PETSC_TRUE) : PETSC_TRUE; /* always true on root; false on others if their size != 0 */
19373ab56b82SJunchao Zhang     ierr = MPI_Allreduce(&ls,&gs,1,MPIU_BOOL,MPI_LAND,mumps->petsc_comm);CHKERRQ(ierr);
1938241dbb5eSStefano Zampini     if (!gs) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MUMPS distributed parallel Schur complements not yet supported from PETSc\n");
1939241dbb5eSStefano Zampini   }
19406444a565SStefano Zampini   if (mumps->id.size_schur != size) {
19416444a565SStefano Zampini     ierr = PetscFree2(mumps->id.listvar_schur,mumps->id.schur);CHKERRQ(ierr);
19426444a565SStefano Zampini     mumps->id.size_schur = size;
19436444a565SStefano Zampini     mumps->id.schur_lld  = size;
19446444a565SStefano Zampini     ierr = PetscMalloc2(size,&mumps->id.listvar_schur,size*size,&mumps->id.schur);CHKERRQ(ierr);
19456444a565SStefano Zampini   }
1946b3cb21ddSStefano Zampini 
1947b3cb21ddSStefano Zampini   /* Schur complement matrix */
1948b3cb21ddSStefano Zampini   ierr = MatCreateSeqDense(PETSC_COMM_SELF,mumps->id.size_schur,mumps->id.size_schur,(PetscScalar*)mumps->id.schur,&F->schur);CHKERRQ(ierr);
1949b3cb21ddSStefano Zampini   if (mumps->sym == 1) {
1950b3cb21ddSStefano Zampini     ierr = MatSetOption(F->schur,MAT_SPD,PETSC_TRUE);CHKERRQ(ierr);
1951b3cb21ddSStefano Zampini   }
1952b3cb21ddSStefano Zampini 
1953b3cb21ddSStefano Zampini   /* MUMPS expects Fortran style indices */
19548e7ba810SStefano Zampini   ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr);
1955580bdb30SBarry Smith   ierr = PetscArraycpy(mumps->id.listvar_schur,idxs,size);CHKERRQ(ierr);
19568e7ba810SStefano Zampini   for (i=0;i<size;i++) mumps->id.listvar_schur[i]++;
19578e7ba810SStefano Zampini   ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr);
19582d4298aeSJunchao Zhang   if (mumps->petsc_size > 1) {
1959241dbb5eSStefano Zampini     mumps->id.ICNTL(19) = 1; /* MUMPS returns Schur centralized on the host */
1960241dbb5eSStefano Zampini   } else {
19616444a565SStefano Zampini     if (F->factortype == MAT_FACTOR_LU) {
196259ac8732SStefano Zampini       mumps->id.ICNTL(19) = 3; /* MUMPS returns full matrix */
19636444a565SStefano Zampini     } else {
196459ac8732SStefano Zampini       mumps->id.ICNTL(19) = 2; /* MUMPS returns lower triangular part */
19656444a565SStefano Zampini     }
1966241dbb5eSStefano Zampini   }
196759ac8732SStefano Zampini   /* set a special value of ICNTL (not handled my MUMPS) to be used in the solve phase by PETSc */
1968b5fa320bSStefano Zampini   mumps->id.ICNTL(26) = -1;
19696444a565SStefano Zampini   PetscFunctionReturn(0);
19706444a565SStefano Zampini }
197159ac8732SStefano Zampini 
19726444a565SStefano Zampini /* -------------------------------------------------------------------------------------------*/
19735a05ddb0SStefano Zampini PetscErrorCode MatFactorCreateSchurComplement_MUMPS(Mat F,Mat* S)
19746444a565SStefano Zampini {
19756444a565SStefano Zampini   Mat            St;
1976e69c285eSBarry Smith   Mat_MUMPS      *mumps =(Mat_MUMPS*)F->data;
19776444a565SStefano Zampini   PetscScalar    *array;
19786444a565SStefano Zampini #if defined(PETSC_USE_COMPLEX)
19798ac429a0SStefano Zampini   PetscScalar    im = PetscSqrtScalar((PetscScalar)-1.0);
19806444a565SStefano Zampini #endif
19816444a565SStefano Zampini   PetscErrorCode ierr;
19826444a565SStefano Zampini 
19836444a565SStefano Zampini   PetscFunctionBegin;
19845a05ddb0SStefano Zampini   if (!mumps->id.ICNTL(19)) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it");
1985241dbb5eSStefano Zampini   ierr = MatCreate(PETSC_COMM_SELF,&St);CHKERRQ(ierr);
19866444a565SStefano Zampini   ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mumps->id.size_schur,mumps->id.size_schur);CHKERRQ(ierr);
19876444a565SStefano Zampini   ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr);
19886444a565SStefano Zampini   ierr = MatSetUp(St);CHKERRQ(ierr);
19896444a565SStefano Zampini   ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr);
199059ac8732SStefano Zampini   if (!mumps->sym) { /* MUMPS always return a full matrix */
19916444a565SStefano Zampini     if (mumps->id.ICNTL(19) == 1) { /* stored by rows */
19926444a565SStefano Zampini       PetscInt i,j,N=mumps->id.size_schur;
19936444a565SStefano Zampini       for (i=0;i<N;i++) {
19946444a565SStefano Zampini         for (j=0;j<N;j++) {
19956444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX)
19966444a565SStefano Zampini           PetscScalar val = mumps->id.schur[i*N+j];
19976444a565SStefano Zampini #else
19986444a565SStefano Zampini           PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i;
19996444a565SStefano Zampini #endif
20006444a565SStefano Zampini           array[j*N+i] = val;
20016444a565SStefano Zampini         }
20026444a565SStefano Zampini       }
20036444a565SStefano Zampini     } else { /* stored by columns */
2004580bdb30SBarry Smith       ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr);
20056444a565SStefano Zampini     }
20066444a565SStefano Zampini   } else { /* either full or lower-triangular (not packed) */
20076444a565SStefano Zampini     if (mumps->id.ICNTL(19) == 2) { /* lower triangular stored by columns */
20086444a565SStefano Zampini       PetscInt i,j,N=mumps->id.size_schur;
20096444a565SStefano Zampini       for (i=0;i<N;i++) {
20106444a565SStefano Zampini         for (j=i;j<N;j++) {
20116444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX)
20126444a565SStefano Zampini           PetscScalar val = mumps->id.schur[i*N+j];
20136444a565SStefano Zampini #else
20146444a565SStefano Zampini           PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i;
20156444a565SStefano Zampini #endif
20166444a565SStefano Zampini           array[i*N+j] = val;
20176444a565SStefano Zampini           array[j*N+i] = val;
20186444a565SStefano Zampini         }
20196444a565SStefano Zampini       }
20206444a565SStefano Zampini     } else if (mumps->id.ICNTL(19) == 3) { /* full matrix */
2021580bdb30SBarry Smith       ierr = PetscArraycpy(array,mumps->id.schur,mumps->id.size_schur*mumps->id.size_schur);CHKERRQ(ierr);
20226444a565SStefano Zampini     } else { /* ICNTL(19) == 1 lower triangular stored by rows */
20236444a565SStefano Zampini       PetscInt i,j,N=mumps->id.size_schur;
20246444a565SStefano Zampini       for (i=0;i<N;i++) {
20256444a565SStefano Zampini         for (j=0;j<i+1;j++) {
20266444a565SStefano Zampini #if !defined(PETSC_USE_COMPLEX)
20276444a565SStefano Zampini           PetscScalar val = mumps->id.schur[i*N+j];
20286444a565SStefano Zampini #else
20296444a565SStefano Zampini           PetscScalar val = mumps->id.schur[i*N+j].r + im*mumps->id.schur[i*N+j].i;
20306444a565SStefano Zampini #endif
20316444a565SStefano Zampini           array[i*N+j] = val;
20326444a565SStefano Zampini           array[j*N+i] = val;
20336444a565SStefano Zampini         }
20346444a565SStefano Zampini       }
20356444a565SStefano Zampini     }
20366444a565SStefano Zampini   }
20376444a565SStefano Zampini   ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr);
20386444a565SStefano Zampini   *S   = St;
20396444a565SStefano Zampini   PetscFunctionReturn(0);
20406444a565SStefano Zampini }
20416444a565SStefano Zampini 
204259ac8732SStefano Zampini /* -------------------------------------------------------------------------------------------*/
20435ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt ival)
20445ccb76cbSHong Zhang {
2045e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
20465ccb76cbSHong Zhang 
20475ccb76cbSHong Zhang   PetscFunctionBegin;
2048a5e57a09SHong Zhang   mumps->id.ICNTL(icntl) = ival;
20495ccb76cbSHong Zhang   PetscFunctionReturn(0);
20505ccb76cbSHong Zhang }
20515ccb76cbSHong Zhang 
2052bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl_MUMPS(Mat F,PetscInt icntl,PetscInt *ival)
2053bc6112feSHong Zhang {
2054e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
2055bc6112feSHong Zhang 
2056bc6112feSHong Zhang   PetscFunctionBegin;
2057bc6112feSHong Zhang   *ival = mumps->id.ICNTL(icntl);
2058bc6112feSHong Zhang   PetscFunctionReturn(0);
2059bc6112feSHong Zhang }
2060bc6112feSHong Zhang 
20615ccb76cbSHong Zhang /*@
20625ccb76cbSHong Zhang   MatMumpsSetIcntl - Set MUMPS parameter ICNTL()
20635ccb76cbSHong Zhang 
20645ccb76cbSHong Zhang    Logically Collective on Mat
20655ccb76cbSHong Zhang 
20665ccb76cbSHong Zhang    Input Parameters:
20675ccb76cbSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
20685ccb76cbSHong Zhang .  icntl - index of MUMPS parameter array ICNTL()
20695ccb76cbSHong Zhang -  ival - value of MUMPS ICNTL(icntl)
20705ccb76cbSHong Zhang 
20715ccb76cbSHong Zhang   Options Database:
20725ccb76cbSHong Zhang .   -mat_mumps_icntl_<icntl> <ival>
20735ccb76cbSHong Zhang 
20745ccb76cbSHong Zhang    Level: beginner
20755ccb76cbSHong Zhang 
207696a0c994SBarry Smith    References:
207796a0c994SBarry Smith .     MUMPS Users' Guide
20785ccb76cbSHong Zhang 
20799fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
20805ccb76cbSHong Zhang  @*/
20815ccb76cbSHong Zhang PetscErrorCode MatMumpsSetIcntl(Mat F,PetscInt icntl,PetscInt ival)
20825ccb76cbSHong Zhang {
20835ccb76cbSHong Zhang   PetscErrorCode ierr;
20845ccb76cbSHong Zhang 
20855ccb76cbSHong Zhang   PetscFunctionBegin;
20862989dfd4SHong Zhang   PetscValidType(F,1);
20872989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
20885ccb76cbSHong Zhang   PetscValidLogicalCollectiveInt(F,icntl,2);
20895ccb76cbSHong Zhang   PetscValidLogicalCollectiveInt(F,ival,3);
20905ccb76cbSHong Zhang   ierr = PetscTryMethod(F,"MatMumpsSetIcntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr);
20915ccb76cbSHong Zhang   PetscFunctionReturn(0);
20925ccb76cbSHong Zhang }
20935ccb76cbSHong Zhang 
2094a21f80fcSHong Zhang /*@
2095a21f80fcSHong Zhang   MatMumpsGetIcntl - Get MUMPS parameter ICNTL()
2096a21f80fcSHong Zhang 
2097a21f80fcSHong Zhang    Logically Collective on Mat
2098a21f80fcSHong Zhang 
2099a21f80fcSHong Zhang    Input Parameters:
2100a21f80fcSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2101a21f80fcSHong Zhang -  icntl - index of MUMPS parameter array ICNTL()
2102a21f80fcSHong Zhang 
2103a21f80fcSHong Zhang   Output Parameter:
2104a21f80fcSHong Zhang .  ival - value of MUMPS ICNTL(icntl)
2105a21f80fcSHong Zhang 
2106a21f80fcSHong Zhang    Level: beginner
2107a21f80fcSHong Zhang 
210896a0c994SBarry Smith    References:
210996a0c994SBarry Smith .     MUMPS Users' Guide
2110a21f80fcSHong Zhang 
21119fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
2112a21f80fcSHong Zhang @*/
2113bc6112feSHong Zhang PetscErrorCode MatMumpsGetIcntl(Mat F,PetscInt icntl,PetscInt *ival)
2114bc6112feSHong Zhang {
2115bc6112feSHong Zhang   PetscErrorCode ierr;
2116bc6112feSHong Zhang 
2117bc6112feSHong Zhang   PetscFunctionBegin;
21182989dfd4SHong Zhang   PetscValidType(F,1);
21192989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
2120bc6112feSHong Zhang   PetscValidLogicalCollectiveInt(F,icntl,2);
2121bc6112feSHong Zhang   PetscValidIntPointer(ival,3);
21222989dfd4SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetIcntl_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr);
2123bc6112feSHong Zhang   PetscFunctionReturn(0);
2124bc6112feSHong Zhang }
2125bc6112feSHong Zhang 
21268928b65cSHong Zhang /* -------------------------------------------------------------------------------------------*/
21278928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal val)
21288928b65cSHong Zhang {
2129e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
21308928b65cSHong Zhang 
21318928b65cSHong Zhang   PetscFunctionBegin;
21328928b65cSHong Zhang   mumps->id.CNTL(icntl) = val;
21338928b65cSHong Zhang   PetscFunctionReturn(0);
21348928b65cSHong Zhang }
21358928b65cSHong Zhang 
2136bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl_MUMPS(Mat F,PetscInt icntl,PetscReal *val)
2137bc6112feSHong Zhang {
2138e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
2139bc6112feSHong Zhang 
2140bc6112feSHong Zhang   PetscFunctionBegin;
2141bc6112feSHong Zhang   *val = mumps->id.CNTL(icntl);
2142bc6112feSHong Zhang   PetscFunctionReturn(0);
2143bc6112feSHong Zhang }
2144bc6112feSHong Zhang 
21458928b65cSHong Zhang /*@
21468928b65cSHong Zhang   MatMumpsSetCntl - Set MUMPS parameter CNTL()
21478928b65cSHong Zhang 
21488928b65cSHong Zhang    Logically Collective on Mat
21498928b65cSHong Zhang 
21508928b65cSHong Zhang    Input Parameters:
21518928b65cSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
21528928b65cSHong Zhang .  icntl - index of MUMPS parameter array CNTL()
21538928b65cSHong Zhang -  val - value of MUMPS CNTL(icntl)
21548928b65cSHong Zhang 
21558928b65cSHong Zhang   Options Database:
21568928b65cSHong Zhang .   -mat_mumps_cntl_<icntl> <val>
21578928b65cSHong Zhang 
21588928b65cSHong Zhang    Level: beginner
21598928b65cSHong Zhang 
216096a0c994SBarry Smith    References:
216196a0c994SBarry Smith .     MUMPS Users' Guide
21628928b65cSHong Zhang 
21639fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
21648928b65cSHong Zhang @*/
21658928b65cSHong Zhang PetscErrorCode MatMumpsSetCntl(Mat F,PetscInt icntl,PetscReal val)
21668928b65cSHong Zhang {
21678928b65cSHong Zhang   PetscErrorCode ierr;
21688928b65cSHong Zhang 
21698928b65cSHong Zhang   PetscFunctionBegin;
21702989dfd4SHong Zhang   PetscValidType(F,1);
21712989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
21728928b65cSHong Zhang   PetscValidLogicalCollectiveInt(F,icntl,2);
2173bc6112feSHong Zhang   PetscValidLogicalCollectiveReal(F,val,3);
21748928b65cSHong Zhang   ierr = PetscTryMethod(F,"MatMumpsSetCntl_C",(Mat,PetscInt,PetscReal),(F,icntl,val));CHKERRQ(ierr);
21758928b65cSHong Zhang   PetscFunctionReturn(0);
21768928b65cSHong Zhang }
21778928b65cSHong Zhang 
2178a21f80fcSHong Zhang /*@
2179a21f80fcSHong Zhang   MatMumpsGetCntl - Get MUMPS parameter CNTL()
2180a21f80fcSHong Zhang 
2181a21f80fcSHong Zhang    Logically Collective on Mat
2182a21f80fcSHong Zhang 
2183a21f80fcSHong Zhang    Input Parameters:
2184a21f80fcSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2185a21f80fcSHong Zhang -  icntl - index of MUMPS parameter array CNTL()
2186a21f80fcSHong Zhang 
2187a21f80fcSHong Zhang   Output Parameter:
2188a21f80fcSHong Zhang .  val - value of MUMPS CNTL(icntl)
2189a21f80fcSHong Zhang 
2190a21f80fcSHong Zhang    Level: beginner
2191a21f80fcSHong Zhang 
219296a0c994SBarry Smith    References:
219396a0c994SBarry Smith .      MUMPS Users' Guide
2194a21f80fcSHong Zhang 
21959fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
2196a21f80fcSHong Zhang @*/
2197bc6112feSHong Zhang PetscErrorCode MatMumpsGetCntl(Mat F,PetscInt icntl,PetscReal *val)
2198bc6112feSHong Zhang {
2199bc6112feSHong Zhang   PetscErrorCode ierr;
2200bc6112feSHong Zhang 
2201bc6112feSHong Zhang   PetscFunctionBegin;
22022989dfd4SHong Zhang   PetscValidType(F,1);
22032989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
2204bc6112feSHong Zhang   PetscValidLogicalCollectiveInt(F,icntl,2);
2205bc6112feSHong Zhang   PetscValidRealPointer(val,3);
22062989dfd4SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetCntl_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr);
2207bc6112feSHong Zhang   PetscFunctionReturn(0);
2208bc6112feSHong Zhang }
2209bc6112feSHong Zhang 
2210ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo_MUMPS(Mat F,PetscInt icntl,PetscInt *info)
2211bc6112feSHong Zhang {
2212e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
2213bc6112feSHong Zhang 
2214bc6112feSHong Zhang   PetscFunctionBegin;
2215bc6112feSHong Zhang   *info = mumps->id.INFO(icntl);
2216bc6112feSHong Zhang   PetscFunctionReturn(0);
2217bc6112feSHong Zhang }
2218bc6112feSHong Zhang 
2219ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog_MUMPS(Mat F,PetscInt icntl,PetscInt *infog)
2220bc6112feSHong Zhang {
2221e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
2222bc6112feSHong Zhang 
2223bc6112feSHong Zhang   PetscFunctionBegin;
2224bc6112feSHong Zhang   *infog = mumps->id.INFOG(icntl);
2225bc6112feSHong Zhang   PetscFunctionReturn(0);
2226bc6112feSHong Zhang }
2227bc6112feSHong Zhang 
2228ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfo)
2229bc6112feSHong Zhang {
2230e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
2231bc6112feSHong Zhang 
2232bc6112feSHong Zhang   PetscFunctionBegin;
2233bc6112feSHong Zhang   *rinfo = mumps->id.RINFO(icntl);
2234bc6112feSHong Zhang   PetscFunctionReturn(0);
2235bc6112feSHong Zhang }
2236bc6112feSHong Zhang 
2237ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog_MUMPS(Mat F,PetscInt icntl,PetscReal *rinfog)
2238bc6112feSHong Zhang {
2239e69c285eSBarry Smith   Mat_MUMPS *mumps =(Mat_MUMPS*)F->data;
2240bc6112feSHong Zhang 
2241bc6112feSHong Zhang   PetscFunctionBegin;
2242bc6112feSHong Zhang   *rinfog = mumps->id.RINFOG(icntl);
2243bc6112feSHong Zhang   PetscFunctionReturn(0);
2244bc6112feSHong Zhang }
2245bc6112feSHong Zhang 
224689a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse_MUMPS(Mat F,Mat spRHS)
2247bb599dfdSHong Zhang {
2248bb599dfdSHong Zhang   PetscErrorCode ierr;
22490e6b8875SHong Zhang   Mat            Bt = NULL,Btseq = NULL;
22500e6b8875SHong Zhang   PetscBool      flg;
2251bb599dfdSHong Zhang   Mat_MUMPS      *mumps =(Mat_MUMPS*)F->data;
2252bb599dfdSHong Zhang   PetscScalar    *aa;
2253bb599dfdSHong Zhang   PetscInt       spnr,*ia,*ja;
2254bb599dfdSHong Zhang 
2255bb599dfdSHong Zhang   PetscFunctionBegin;
2256e3f2db6aSHong Zhang   PetscValidIntPointer(spRHS,2);
22570e6b8875SHong Zhang   ierr = PetscObjectTypeCompare((PetscObject)spRHS,MATTRANSPOSEMAT,&flg);CHKERRQ(ierr);
22580e6b8875SHong Zhang   if (flg) {
2259bb599dfdSHong Zhang     ierr = MatTransposeGetMat(spRHS,&Bt);CHKERRQ(ierr);
22600e6b8875SHong Zhang   } else SETERRQ(PetscObjectComm((PetscObject)spRHS),PETSC_ERR_ARG_WRONG,"Matrix spRHS must be type MATTRANSPOSEMAT matrix");
2261bb599dfdSHong Zhang 
2262bb599dfdSHong Zhang   ierr = MatMumpsSetIcntl(F,30,1);CHKERRQ(ierr);
2263bb599dfdSHong Zhang 
22642d4298aeSJunchao Zhang   if (mumps->petsc_size > 1) {
22650e6b8875SHong Zhang     Mat_MPIAIJ *b = (Mat_MPIAIJ*)Bt->data;
22660e6b8875SHong Zhang     Btseq = b->A;
22670e6b8875SHong Zhang   } else {
22680e6b8875SHong Zhang     Btseq = Bt;
22690e6b8875SHong Zhang   }
22700e6b8875SHong Zhang 
2271e3f2db6aSHong Zhang   if (!mumps->myid) {
22720e6b8875SHong Zhang     ierr = MatSeqAIJGetArray(Btseq,&aa);CHKERRQ(ierr);
22730e6b8875SHong Zhang     ierr = MatGetRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr);
22740e6b8875SHong Zhang     if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure");
2275bb599dfdSHong Zhang 
2276bb599dfdSHong Zhang     mumps->id.irhs_ptr    = ia;
2277bb599dfdSHong Zhang     mumps->id.irhs_sparse = ja;
2278bb599dfdSHong Zhang     mumps->id.nz_rhs      = ia[spnr] - 1;
2279bb599dfdSHong Zhang     mumps->id.rhs_sparse  = (MumpsScalar*)aa;
2280e3f2db6aSHong Zhang   } else {
2281e3f2db6aSHong Zhang     mumps->id.irhs_ptr    = NULL;
2282e3f2db6aSHong Zhang     mumps->id.irhs_sparse = NULL;
2283e3f2db6aSHong Zhang     mumps->id.nz_rhs      = 0;
2284e3f2db6aSHong Zhang     mumps->id.rhs_sparse  = NULL;
2285e3f2db6aSHong Zhang   }
2286bb599dfdSHong Zhang   mumps->id.ICNTL(20)   = 1; /* rhs is sparse */
2287e3f2db6aSHong Zhang   mumps->id.ICNTL(21)   = 0; /* solution is in assembled centralized format */
2288bb599dfdSHong Zhang 
2289bb599dfdSHong Zhang   /* solve phase */
2290bb599dfdSHong Zhang   /*-------------*/
2291bb599dfdSHong Zhang   mumps->id.job = JOB_SOLVE;
22923ab56b82SJunchao Zhang   PetscMUMPS_c(mumps);
2293e3f2db6aSHong Zhang   if (mumps->id.INFOG(1) < 0)
2294e3f2db6aSHong Zhang     SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MUMPS in solve phase: INFOG(1)=%d INFO(2)=%d\n",mumps->id.INFOG(1),mumps->id.INFO(2));
229514267174SHong Zhang 
2296e3f2db6aSHong Zhang   if (!mumps->myid) {
22970e6b8875SHong Zhang     ierr = MatSeqAIJRestoreArray(Btseq,&aa);CHKERRQ(ierr);
22980e6b8875SHong Zhang     ierr = MatRestoreRowIJ(Btseq,1,PETSC_FALSE,PETSC_FALSE,&spnr,(const PetscInt**)&ia,(const PetscInt**)&ja,&flg);CHKERRQ(ierr);
22990e6b8875SHong Zhang     if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Cannot get IJ structure");
2300e3f2db6aSHong Zhang   }
2301bb599dfdSHong Zhang   PetscFunctionReturn(0);
2302bb599dfdSHong Zhang }
2303bb599dfdSHong Zhang 
2304bb599dfdSHong Zhang /*@
230589a9c03aSHong Zhang   MatMumpsGetInverse - Get user-specified set of entries in inverse of A
2306bb599dfdSHong Zhang 
2307bb599dfdSHong Zhang    Logically Collective on Mat
2308bb599dfdSHong Zhang 
2309bb599dfdSHong Zhang    Input Parameters:
2310bb599dfdSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2311e3f2db6aSHong Zhang -  spRHS - sequential sparse matrix in MATTRANSPOSEMAT format holding specified indices in processor[0]
2312bb599dfdSHong Zhang 
2313bb599dfdSHong Zhang   Output Parameter:
2314e3f2db6aSHong Zhang . spRHS - requested entries of inverse of A
2315bb599dfdSHong Zhang 
2316bb599dfdSHong Zhang    Level: beginner
2317bb599dfdSHong Zhang 
2318bb599dfdSHong Zhang    References:
2319bb599dfdSHong Zhang .      MUMPS Users' Guide
2320bb599dfdSHong Zhang 
2321bb599dfdSHong Zhang .seealso: MatGetFactor(), MatCreateTranspose()
2322bb599dfdSHong Zhang @*/
232389a9c03aSHong Zhang PetscErrorCode MatMumpsGetInverse(Mat F,Mat spRHS)
2324bb599dfdSHong Zhang {
2325bb599dfdSHong Zhang   PetscErrorCode ierr;
2326bb599dfdSHong Zhang 
2327bb599dfdSHong Zhang   PetscFunctionBegin;
2328bb599dfdSHong Zhang   PetscValidType(F,1);
2329bb599dfdSHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
233089a9c03aSHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetInverse_C",(Mat,Mat),(F,spRHS));CHKERRQ(ierr);
2331bb599dfdSHong Zhang   PetscFunctionReturn(0);
2332bb599dfdSHong Zhang }
2333bb599dfdSHong Zhang 
23340e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose_MUMPS(Mat F,Mat spRHST)
23350e6b8875SHong Zhang {
23360e6b8875SHong Zhang   PetscErrorCode ierr;
23370e6b8875SHong Zhang   Mat            spRHS;
23380e6b8875SHong Zhang 
23390e6b8875SHong Zhang   PetscFunctionBegin;
23400e6b8875SHong Zhang   ierr = MatCreateTranspose(spRHST,&spRHS);CHKERRQ(ierr);
23410e6b8875SHong Zhang   ierr = MatMumpsGetInverse_MUMPS(F,spRHS);CHKERRQ(ierr);
23420e6b8875SHong Zhang   ierr = MatDestroy(&spRHS);CHKERRQ(ierr);
23430e6b8875SHong Zhang   PetscFunctionReturn(0);
23440e6b8875SHong Zhang }
23450e6b8875SHong Zhang 
23460e6b8875SHong Zhang /*@
2347eef1237cSHong Zhang   MatMumpsGetInverseTranspose - Get user-specified set of entries in inverse of matrix A^T
23480e6b8875SHong Zhang 
23490e6b8875SHong Zhang    Logically Collective on Mat
23500e6b8875SHong Zhang 
23510e6b8875SHong Zhang    Input Parameters:
23520e6b8875SHong Zhang +  F - the factored matrix of A obtained by calling MatGetFactor() from PETSc-MUMPS interface
23530e6b8875SHong Zhang -  spRHST - sequential sparse matrix in MATAIJ format holding specified indices of A^T in processor[0]
23540e6b8875SHong Zhang 
23550e6b8875SHong Zhang   Output Parameter:
23560e6b8875SHong Zhang . spRHST - requested entries of inverse of A^T
23570e6b8875SHong Zhang 
23580e6b8875SHong Zhang    Level: beginner
23590e6b8875SHong Zhang 
23600e6b8875SHong Zhang    References:
23610e6b8875SHong Zhang .      MUMPS Users' Guide
23620e6b8875SHong Zhang 
23630e6b8875SHong Zhang .seealso: MatGetFactor(), MatCreateTranspose(), MatMumpsGetInverse()
23640e6b8875SHong Zhang @*/
23650e6b8875SHong Zhang PetscErrorCode MatMumpsGetInverseTranspose(Mat F,Mat spRHST)
23660e6b8875SHong Zhang {
23670e6b8875SHong Zhang   PetscErrorCode ierr;
23680e6b8875SHong Zhang   PetscBool      flg;
23690e6b8875SHong Zhang 
23700e6b8875SHong Zhang   PetscFunctionBegin;
23710e6b8875SHong Zhang   PetscValidType(F,1);
23720e6b8875SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
23730e6b8875SHong Zhang   ierr = PetscObjectTypeCompareAny((PetscObject)spRHST,&flg,MATSEQAIJ,MATMPIAIJ,NULL);CHKERRQ(ierr);
23740e6b8875SHong Zhang   if (!flg) SETERRQ(PetscObjectComm((PetscObject)spRHST),PETSC_ERR_ARG_WRONG,"Matrix spRHST must be MATAIJ matrix");
23750e6b8875SHong Zhang 
23760e6b8875SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetInverseTranspose_C",(Mat,Mat),(F,spRHST));CHKERRQ(ierr);
23770e6b8875SHong Zhang   PetscFunctionReturn(0);
23780e6b8875SHong Zhang }
23790e6b8875SHong Zhang 
2380a21f80fcSHong Zhang /*@
2381a21f80fcSHong Zhang   MatMumpsGetInfo - Get MUMPS parameter INFO()
2382a21f80fcSHong Zhang 
2383a21f80fcSHong Zhang    Logically Collective on Mat
2384a21f80fcSHong Zhang 
2385a21f80fcSHong Zhang    Input Parameters:
2386a21f80fcSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2387a21f80fcSHong Zhang -  icntl - index of MUMPS parameter array INFO()
2388a21f80fcSHong Zhang 
2389a21f80fcSHong Zhang   Output Parameter:
2390a21f80fcSHong Zhang .  ival - value of MUMPS INFO(icntl)
2391a21f80fcSHong Zhang 
2392a21f80fcSHong Zhang    Level: beginner
2393a21f80fcSHong Zhang 
239496a0c994SBarry Smith    References:
239596a0c994SBarry Smith .      MUMPS Users' Guide
2396a21f80fcSHong Zhang 
23979fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
2398a21f80fcSHong Zhang @*/
2399ca810319SHong Zhang PetscErrorCode MatMumpsGetInfo(Mat F,PetscInt icntl,PetscInt *ival)
2400bc6112feSHong Zhang {
2401bc6112feSHong Zhang   PetscErrorCode ierr;
2402bc6112feSHong Zhang 
2403bc6112feSHong Zhang   PetscFunctionBegin;
24042989dfd4SHong Zhang   PetscValidType(F,1);
24052989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
2406ca810319SHong Zhang   PetscValidIntPointer(ival,3);
24072989dfd4SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetInfo_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr);
2408bc6112feSHong Zhang   PetscFunctionReturn(0);
2409bc6112feSHong Zhang }
2410bc6112feSHong Zhang 
2411a21f80fcSHong Zhang /*@
2412a21f80fcSHong Zhang   MatMumpsGetInfog - Get MUMPS parameter INFOG()
2413a21f80fcSHong Zhang 
2414a21f80fcSHong Zhang    Logically Collective on Mat
2415a21f80fcSHong Zhang 
2416a21f80fcSHong Zhang    Input Parameters:
2417a21f80fcSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2418a21f80fcSHong Zhang -  icntl - index of MUMPS parameter array INFOG()
2419a21f80fcSHong Zhang 
2420a21f80fcSHong Zhang   Output Parameter:
2421a21f80fcSHong Zhang .  ival - value of MUMPS INFOG(icntl)
2422a21f80fcSHong Zhang 
2423a21f80fcSHong Zhang    Level: beginner
2424a21f80fcSHong Zhang 
242596a0c994SBarry Smith    References:
242696a0c994SBarry Smith .      MUMPS Users' Guide
2427a21f80fcSHong Zhang 
24289fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
2429a21f80fcSHong Zhang @*/
2430ca810319SHong Zhang PetscErrorCode MatMumpsGetInfog(Mat F,PetscInt icntl,PetscInt *ival)
2431bc6112feSHong Zhang {
2432bc6112feSHong Zhang   PetscErrorCode ierr;
2433bc6112feSHong Zhang 
2434bc6112feSHong Zhang   PetscFunctionBegin;
24352989dfd4SHong Zhang   PetscValidType(F,1);
24362989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
2437ca810319SHong Zhang   PetscValidIntPointer(ival,3);
24382989dfd4SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetInfog_C",(Mat,PetscInt,PetscInt*),(F,icntl,ival));CHKERRQ(ierr);
2439bc6112feSHong Zhang   PetscFunctionReturn(0);
2440bc6112feSHong Zhang }
2441bc6112feSHong Zhang 
2442a21f80fcSHong Zhang /*@
2443a21f80fcSHong Zhang   MatMumpsGetRinfo - Get MUMPS parameter RINFO()
2444a21f80fcSHong Zhang 
2445a21f80fcSHong Zhang    Logically Collective on Mat
2446a21f80fcSHong Zhang 
2447a21f80fcSHong Zhang    Input Parameters:
2448a21f80fcSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2449a21f80fcSHong Zhang -  icntl - index of MUMPS parameter array RINFO()
2450a21f80fcSHong Zhang 
2451a21f80fcSHong Zhang   Output Parameter:
2452a21f80fcSHong Zhang .  val - value of MUMPS RINFO(icntl)
2453a21f80fcSHong Zhang 
2454a21f80fcSHong Zhang    Level: beginner
2455a21f80fcSHong Zhang 
245696a0c994SBarry Smith    References:
245796a0c994SBarry Smith .       MUMPS Users' Guide
2458a21f80fcSHong Zhang 
24599fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
2460a21f80fcSHong Zhang @*/
2461ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfo(Mat F,PetscInt icntl,PetscReal *val)
2462bc6112feSHong Zhang {
2463bc6112feSHong Zhang   PetscErrorCode ierr;
2464bc6112feSHong Zhang 
2465bc6112feSHong Zhang   PetscFunctionBegin;
24662989dfd4SHong Zhang   PetscValidType(F,1);
24672989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
2468bc6112feSHong Zhang   PetscValidRealPointer(val,3);
24692989dfd4SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetRinfo_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr);
2470bc6112feSHong Zhang   PetscFunctionReturn(0);
2471bc6112feSHong Zhang }
2472bc6112feSHong Zhang 
2473a21f80fcSHong Zhang /*@
2474a21f80fcSHong Zhang   MatMumpsGetRinfog - Get MUMPS parameter RINFOG()
2475a21f80fcSHong Zhang 
2476a21f80fcSHong Zhang    Logically Collective on Mat
2477a21f80fcSHong Zhang 
2478a21f80fcSHong Zhang    Input Parameters:
2479a21f80fcSHong Zhang +  F - the factored matrix obtained by calling MatGetFactor() from PETSc-MUMPS interface
2480a21f80fcSHong Zhang -  icntl - index of MUMPS parameter array RINFOG()
2481a21f80fcSHong Zhang 
2482a21f80fcSHong Zhang   Output Parameter:
2483a21f80fcSHong Zhang .  val - value of MUMPS RINFOG(icntl)
2484a21f80fcSHong Zhang 
2485a21f80fcSHong Zhang    Level: beginner
2486a21f80fcSHong Zhang 
248796a0c994SBarry Smith    References:
248896a0c994SBarry Smith .      MUMPS Users' Guide
2489a21f80fcSHong Zhang 
24909fc87aa7SBarry Smith .seealso: MatGetFactor(), MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog()
2491a21f80fcSHong Zhang @*/
2492ca810319SHong Zhang PetscErrorCode MatMumpsGetRinfog(Mat F,PetscInt icntl,PetscReal *val)
2493bc6112feSHong Zhang {
2494bc6112feSHong Zhang   PetscErrorCode ierr;
2495bc6112feSHong Zhang 
2496bc6112feSHong Zhang   PetscFunctionBegin;
24972989dfd4SHong Zhang   PetscValidType(F,1);
24982989dfd4SHong Zhang   if (!F->factortype) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ARG_WRONGSTATE,"Only for factored matrix");
2499bc6112feSHong Zhang   PetscValidRealPointer(val,3);
25002989dfd4SHong Zhang   ierr = PetscUseMethod(F,"MatMumpsGetRinfog_C",(Mat,PetscInt,PetscReal*),(F,icntl,val));CHKERRQ(ierr);
2501bc6112feSHong Zhang   PetscFunctionReturn(0);
2502bc6112feSHong Zhang }
2503bc6112feSHong Zhang 
250424b6179bSKris Buschelman /*MC
25052692d6eeSBarry Smith   MATSOLVERMUMPS -  A matrix type providing direct solvers (LU and Cholesky) for
250624b6179bSKris Buschelman   distributed and sequential matrices via the external package MUMPS.
250724b6179bSKris Buschelman 
250841c8de11SBarry Smith   Works with MATAIJ and MATSBAIJ matrices
250924b6179bSKris Buschelman 
2510c2b89b5dSBarry Smith   Use ./configure --download-mumps --download-scalapack --download-parmetis --download-metis --download-ptscotch to have PETSc installed with MUMPS
2511c2b89b5dSBarry Smith 
2512217d3b1eSJunchao Zhang   Use ./configure --with-openmp --download-hwloc (or --with-hwloc) to enable running MUMPS in MPI+OpenMP hybrid mode and non-MUMPS in flat-MPI mode. See details below.
2513217d3b1eSJunchao Zhang 
25143ca39a21SBarry Smith   Use -pc_type cholesky or lu -pc_factor_mat_solver_type mumps to use this direct solver
2515c2b89b5dSBarry Smith 
251624b6179bSKris Buschelman   Options Database Keys:
25174422a9fcSPatrick Sanan +  -mat_mumps_icntl_1 - ICNTL(1): output stream for error messages
25184422a9fcSPatrick Sanan .  -mat_mumps_icntl_2 - ICNTL(2): output stream for diagnostic printing, statistics, and warning
25194422a9fcSPatrick Sanan .  -mat_mumps_icntl_3 -  ICNTL(3): output stream for global information, collected on the host
25204422a9fcSPatrick Sanan .  -mat_mumps_icntl_4 -  ICNTL(4): level of printing (0 to 4)
25214422a9fcSPatrick Sanan .  -mat_mumps_icntl_6 - ICNTL(6): permutes to a zero-free diagonal and/or scale the matrix (0 to 7)
25224422a9fcSPatrick Sanan .  -mat_mumps_icntl_7 - ICNTL(7): computes a symmetric permutation in sequential analysis (0 to 7). 3=Scotch, 4=PORD, 5=Metis
25234422a9fcSPatrick Sanan .  -mat_mumps_icntl_8  - ICNTL(8): scaling strategy (-2 to 8 or 77)
25244422a9fcSPatrick Sanan .  -mat_mumps_icntl_10  - ICNTL(10): max num of refinements
25254422a9fcSPatrick Sanan .  -mat_mumps_icntl_11  - ICNTL(11): statistics related to an error analysis (via -ksp_view)
25264422a9fcSPatrick Sanan .  -mat_mumps_icntl_12  - ICNTL(12): an ordering strategy for symmetric matrices (0 to 3)
25274422a9fcSPatrick Sanan .  -mat_mumps_icntl_13  - ICNTL(13): parallelism of the root node (enable ScaLAPACK) and its splitting
25284422a9fcSPatrick Sanan .  -mat_mumps_icntl_14  - ICNTL(14): percentage increase in the estimated working space
25294422a9fcSPatrick Sanan .  -mat_mumps_icntl_19  - ICNTL(19): computes the Schur complement
25304422a9fcSPatrick Sanan .  -mat_mumps_icntl_22  - ICNTL(22): in-core/out-of-core factorization and solve (0 or 1)
25314422a9fcSPatrick Sanan .  -mat_mumps_icntl_23  - ICNTL(23): max size of the working memory (MB) that can allocate per processor
25324422a9fcSPatrick Sanan .  -mat_mumps_icntl_24  - ICNTL(24): detection of null pivot rows (0 or 1)
25334422a9fcSPatrick Sanan .  -mat_mumps_icntl_25  - ICNTL(25): compute a solution of a deficient matrix and a null space basis
25344422a9fcSPatrick Sanan .  -mat_mumps_icntl_26  - ICNTL(26): drives the solution phase if a Schur complement matrix
25354422a9fcSPatrick Sanan .  -mat_mumps_icntl_28  - ICNTL(28): use 1 for sequential analysis and ictnl(7) ordering, or 2 for parallel analysis and ictnl(29) ordering
25364422a9fcSPatrick Sanan .  -mat_mumps_icntl_29 - ICNTL(29): parallel ordering 1 = ptscotch, 2 = parmetis
25374422a9fcSPatrick Sanan .  -mat_mumps_icntl_30 - ICNTL(30): compute user-specified set of entries in inv(A)
25384422a9fcSPatrick Sanan .  -mat_mumps_icntl_31 - ICNTL(31): indicates which factors may be discarded during factorization
25394422a9fcSPatrick Sanan .  -mat_mumps_icntl_33 - ICNTL(33): compute determinant
2540a0e18203SThibaut Appel .  -mat_mumps_icntl_35 - ICNTL(35): level of activation of BLR (Block Low-Rank) feature
2541a0e18203SThibaut Appel .  -mat_mumps_icntl_36 - ICNTL(36): controls the choice of BLR factorization variant
2542a0e18203SThibaut Appel .  -mat_mumps_icntl_38 - ICNTL(38): sets the estimated compression rate of LU factors with BLR
25434422a9fcSPatrick Sanan .  -mat_mumps_cntl_1  - CNTL(1): relative pivoting threshold
25444422a9fcSPatrick Sanan .  -mat_mumps_cntl_2  -  CNTL(2): stopping criterion of refinement
25454422a9fcSPatrick Sanan .  -mat_mumps_cntl_3 - CNTL(3): absolute pivoting threshold
25464422a9fcSPatrick Sanan .  -mat_mumps_cntl_4 - CNTL(4): value for static pivoting
2547217d3b1eSJunchao Zhang .  -mat_mumps_cntl_5 - CNTL(5): fixation for null pivots
2548a0e18203SThibaut Appel .  -mat_mumps_cntl_7 - CNTL(7): precision of the dropping parameter used during BLR factorization
2549217d3b1eSJunchao Zhang -  -mat_mumps_use_omp_threads [m] - run MUMPS in MPI+OpenMP hybrid mode as if omp_set_num_threads(m) is called before calling MUMPS.
2550217d3b1eSJunchao Zhang                                    Default might be the number of cores per CPU package (socket) as reported by hwloc and suggested by the MUMPS manual.
255124b6179bSKris Buschelman 
255224b6179bSKris Buschelman   Level: beginner
255324b6179bSKris Buschelman 
255495452b02SPatrick Sanan     Notes:
255538548759SBarry Smith     MUMPS Cholesky does not handle (complex) Hermitian matrices http://mumps.enseeiht.fr/doc/userguide_5.2.1.pdf so using it will error if the matrix is Hermitian.
255638548759SBarry Smith 
2557c0decd05SBarry Smith     When a MUMPS factorization fails inside a KSP solve, for example with a KSP_DIVERGED_PC_FAILED, one can find the MUMPS information about the failure by calling
25589fc87aa7SBarry Smith $          KSPGetPC(ksp,&pc);
25599fc87aa7SBarry Smith $          PCFactorGetMatrix(pc,&mat);
25609fc87aa7SBarry Smith $          MatMumpsGetInfo(mat,....);
25619fc87aa7SBarry Smith $          MatMumpsGetInfog(mat,....); etc.
25629fc87aa7SBarry Smith            Or you can run with -ksp_error_if_not_converged and the program will be stopped and the information printed in the error message.
25639fc87aa7SBarry Smith 
25648fcaa860SBarry Smith    Two modes to run MUMPS/PETSc with OpenMP
25658fcaa860SBarry Smith 
25668fcaa860SBarry Smith $     Set OMP_NUM_THREADS and run with fewer MPI ranks than cores. For example, if you want to have 16 OpenMP
25678fcaa860SBarry Smith $     threads per rank, then you may use "export OMP_NUM_THREADS=16 && mpirun -n 4 ./test".
25688fcaa860SBarry Smith 
25698fcaa860SBarry Smith $     -mat_mumps_use_omp_threads [m] and run your code with as many MPI ranks as the number of cores. For example,
25708fcaa860SBarry Smith $     if a compute node has 32 cores and you run on two nodes, you may use "mpirun -n 64 ./test -mat_mumps_use_omp_threads 16"
25718fcaa860SBarry Smith 
25728fcaa860SBarry Smith    To run MUMPS in MPI+OpenMP hybrid mode (i.e., enable multithreading in MUMPS), but still run the non-MUMPS part
2573217d3b1eSJunchao Zhang    (i.e., PETSc part) of your code in the so-called flat-MPI (aka pure-MPI) mode, you need to configure PETSc with --with-openmp --download-hwloc
2574217d3b1eSJunchao Zhang    (or --with-hwloc), and have an MPI that supports MPI-3.0's process shared memory (which is usually available). Since MUMPS calls BLAS
25758fcaa860SBarry Smith    libraries, to really get performance, you should have multithreaded BLAS libraries such as Intel MKL, AMD ACML, Cray libSci or OpenBLAS
25768fcaa860SBarry Smith    (PETSc will automatically try to utilized a threaded BLAS if --with-openmp is provided).
2577217d3b1eSJunchao Zhang 
25788fcaa860SBarry Smith    If you run your code through a job submission system, there are caveats in MPI rank mapping. We use MPI_Comm_split_type() to obtain MPI
2579217d3b1eSJunchao Zhang    processes on each compute node. Listing the processes in rank ascending order, we split processes on a node into consecutive groups of
2580217d3b1eSJunchao Zhang    size m and create a communicator called omp_comm for each group. Rank 0 in an omp_comm is called the master rank, and others in the omp_comm
2581217d3b1eSJunchao Zhang    are called slave ranks (or slaves). Only master ranks are seen to MUMPS and slaves are not. We will free CPUs assigned to slaves (might be set
2582217d3b1eSJunchao Zhang    by CPU binding policies in job scripts) and make the CPUs available to the master so that OMP threads spawned by MUMPS can run on the CPUs.
2583217d3b1eSJunchao Zhang    In a multi-socket compute node, MPI rank mapping is an issue. Still use the above example and suppose your compute node has two sockets,
2584217d3b1eSJunchao Zhang    if you interleave MPI ranks on the two sockets, in other words, even ranks are placed on socket 0, and odd ranks are on socket 1, and bind
2585217d3b1eSJunchao Zhang    MPI ranks to cores, then with -mat_mumps_use_omp_threads 16, a master rank (and threads it spawns) will use half cores in socket 0, and half
2586217d3b1eSJunchao Zhang    cores in socket 1, that definitely hurts locality. On the other hand, if you map MPI ranks consecutively on the two sockets, then the
2587217d3b1eSJunchao Zhang    problem will not happen. Therefore, when you use -mat_mumps_use_omp_threads, you need to keep an eye on your MPI rank mapping and CPU binding.
25888fcaa860SBarry Smith    For example, with the Slurm job scheduler, one can use srun --cpu-bind=verbose -m block:block to map consecutive MPI ranks to sockets and
2589217d3b1eSJunchao Zhang    examine the mapping result.
2590217d3b1eSJunchao Zhang 
2591217d3b1eSJunchao Zhang    PETSc does not control thread binding in MUMPS. So to get best performance, one still has to set OMP_PROC_BIND and OMP_PLACES in job scripts,
2592217d3b1eSJunchao Zhang    for example, export OMP_PLACES=threads and export OMP_PROC_BIND=spread. One does not need to export OMP_NUM_THREADS=m in job scripts as PETSc
2593217d3b1eSJunchao Zhang    calls omp_set_num_threads(m) internally before calling MUMPS.
2594217d3b1eSJunchao Zhang 
2595217d3b1eSJunchao Zhang    References:
2596217d3b1eSJunchao Zhang +   1. - Heroux, Michael A., R. Brightwell, and Michael M. Wolf. "Bi-modal MPI and MPI+ threads computing on scalable multicore systems." IJHPCA (Submitted) (2011).
2597217d3b1eSJunchao Zhang -   2. - Gutierrez, Samuel K., et al. "Accommodating Thread-Level Heterogeneity in Coupled Parallel Applications." Parallel and Distributed Processing Symposium (IPDPS), 2017 IEEE International. IEEE, 2017.
2598217d3b1eSJunchao Zhang 
25993ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatMumpsSetICntl(), MatMumpsGetIcntl(), MatMumpsSetCntl(), MatMumpsGetCntl(), MatMumpsGetInfo(), MatMumpsGetInfog(), MatMumpsGetRinfo(), MatMumpsGetRinfog(), KSPGetPC(), PCGetFactor(), PCFactorGetMatrix()
260041c8de11SBarry Smith 
260124b6179bSKris Buschelman M*/
260224b6179bSKris Buschelman 
2603ea799195SBarry Smith static PetscErrorCode MatFactorGetSolverType_mumps(Mat A,MatSolverType *type)
260435bd34faSBarry Smith {
260535bd34faSBarry Smith   PetscFunctionBegin;
26062692d6eeSBarry Smith   *type = MATSOLVERMUMPS;
260735bd34faSBarry Smith   PetscFunctionReturn(0);
260835bd34faSBarry Smith }
260935bd34faSBarry Smith 
2610bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI AIJ matrices */
2611cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_aij_mumps(Mat A,MatFactorType ftype,Mat *F)
26122877fffaSHong Zhang {
26132877fffaSHong Zhang   Mat            B;
26142877fffaSHong Zhang   PetscErrorCode ierr;
26152877fffaSHong Zhang   Mat_MUMPS      *mumps;
2616ace3abfcSBarry Smith   PetscBool      isSeqAIJ;
26172877fffaSHong Zhang 
26182877fffaSHong Zhang   PetscFunctionBegin;
26192877fffaSHong Zhang   /* Create the factorization matrix */
2620251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr);
2621ce94432eSBarry Smith   ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
26222877fffaSHong Zhang   ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
2623e69c285eSBarry Smith   ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr);
2624e69c285eSBarry Smith   ierr = MatSetUp(B);CHKERRQ(ierr);
26252877fffaSHong Zhang 
2626b00a9115SJed Brown   ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr);
26272205254eSKarl Rupp 
26282877fffaSHong Zhang   B->ops->view        = MatView_MUMPS;
262935bd34faSBarry Smith   B->ops->getinfo     = MatGetInfo_MUMPS;
26302205254eSKarl Rupp 
26313ca39a21SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr);
26325a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr);
26335a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr);
2634bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr);
2635bc6112feSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr);
2636bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr);
2637bc6112feSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr);
2638ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr);
2639ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr);
2640ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr);
2641ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr);
264289a9c03aSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr);
26430e6b8875SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr);
26446444a565SStefano Zampini 
2645450b117fSShri Abhyankar   if (ftype == MAT_FACTOR_LU) {
2646450b117fSShri Abhyankar     B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS;
2647d5f3da31SBarry Smith     B->factortype            = MAT_FACTOR_LU;
2648bccb9932SShri Abhyankar     if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqaij;
2649bccb9932SShri Abhyankar     else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpiaij;
2650746480a1SHong Zhang     mumps->sym = 0;
2651dcd589f8SShri Abhyankar   } else {
265267877ebaSShri Abhyankar     B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS;
2653450b117fSShri Abhyankar     B->factortype                  = MAT_FACTOR_CHOLESKY;
2654bccb9932SShri Abhyankar     if (isSeqAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqaij_seqsbaij;
2655bccb9932SShri Abhyankar     else mumps->ConvertToTriples = MatConvertToTriples_mpiaij_mpisbaij;
265659ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX)
265759ac8732SStefano Zampini     mumps->sym = 2;
265859ac8732SStefano Zampini #else
26596fdc2a6dSBarry Smith     if (A->spd_set && A->spd) mumps->sym = 1;
26606fdc2a6dSBarry Smith     else                      mumps->sym = 2;
266159ac8732SStefano Zampini #endif
2662450b117fSShri Abhyankar   }
26632877fffaSHong Zhang 
266400c67f3bSHong Zhang   /* set solvertype */
266500c67f3bSHong Zhang   ierr = PetscFree(B->solvertype);CHKERRQ(ierr);
266600c67f3bSHong Zhang   ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr);
266700c67f3bSHong Zhang 
26682877fffaSHong Zhang   B->ops->destroy = MatDestroy_MUMPS;
2669e69c285eSBarry Smith   B->data         = (void*)mumps;
26702205254eSKarl Rupp 
2671f697e70eSHong Zhang   ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr);
2672746480a1SHong Zhang 
26732877fffaSHong Zhang   *F = B;
26742877fffaSHong Zhang   PetscFunctionReturn(0);
26752877fffaSHong Zhang }
26762877fffaSHong Zhang 
2677bccb9932SShri Abhyankar /* MatGetFactor for Seq and MPI SBAIJ matrices */
2678cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_sbaij_mumps(Mat A,MatFactorType ftype,Mat *F)
26792877fffaSHong Zhang {
26802877fffaSHong Zhang   Mat            B;
26812877fffaSHong Zhang   PetscErrorCode ierr;
26822877fffaSHong Zhang   Mat_MUMPS      *mumps;
2683ace3abfcSBarry Smith   PetscBool      isSeqSBAIJ;
26842877fffaSHong Zhang 
26852877fffaSHong Zhang   PetscFunctionBegin;
2686ce94432eSBarry Smith   if (ftype != MAT_FACTOR_CHOLESKY) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with MUMPS LU, use AIJ matrix");
2687251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr);
26882877fffaSHong Zhang   /* Create the factorization matrix */
2689ce94432eSBarry Smith   ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
26902877fffaSHong Zhang   ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
2691e69c285eSBarry Smith   ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr);
2692e69c285eSBarry Smith   ierr = MatSetUp(B);CHKERRQ(ierr);
2693e69c285eSBarry Smith 
2694b00a9115SJed Brown   ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr);
2695bccb9932SShri Abhyankar   if (isSeqSBAIJ) {
269616ebf90aSShri Abhyankar     mumps->ConvertToTriples = MatConvertToTriples_seqsbaij_seqsbaij;
2697dcd589f8SShri Abhyankar   } else {
2698bccb9932SShri Abhyankar     mumps->ConvertToTriples = MatConvertToTriples_mpisbaij_mpisbaij;
2699bccb9932SShri Abhyankar   }
2700bccb9932SShri Abhyankar 
2701e69c285eSBarry Smith   B->ops->getinfo                = MatGetInfo_External;
270267877ebaSShri Abhyankar   B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_MUMPS;
2703bccb9932SShri Abhyankar   B->ops->view                   = MatView_MUMPS;
27042205254eSKarl Rupp 
27053ca39a21SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr);
27065a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr);
27075a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr);
2708b13644aeSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr);
2709b13644aeSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr);
2710b13644aeSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr);
2711b13644aeSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr);
2712ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr);
2713ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr);
2714ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr);
2715ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr);
271689a9c03aSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr);
2717eef1237cSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr);
27182205254eSKarl Rupp 
2719f4762488SHong Zhang   B->factortype = MAT_FACTOR_CHOLESKY;
272059ac8732SStefano Zampini #if defined(PETSC_USE_COMPLEX)
272159ac8732SStefano Zampini   mumps->sym = 2;
272259ac8732SStefano Zampini #else
27236fdc2a6dSBarry Smith   if (A->spd_set && A->spd) mumps->sym = 1;
27246fdc2a6dSBarry Smith   else                      mumps->sym = 2;
272559ac8732SStefano Zampini #endif
2726a214ac2aSShri Abhyankar 
272700c67f3bSHong Zhang   /* set solvertype */
272800c67f3bSHong Zhang   ierr = PetscFree(B->solvertype);CHKERRQ(ierr);
272900c67f3bSHong Zhang   ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr);
273000c67f3bSHong Zhang 
2731f3c0ef26SHong Zhang   B->ops->destroy = MatDestroy_MUMPS;
2732e69c285eSBarry Smith   B->data         = (void*)mumps;
27332205254eSKarl Rupp 
2734f697e70eSHong Zhang   ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr);
2735746480a1SHong Zhang 
27362877fffaSHong Zhang   *F = B;
27372877fffaSHong Zhang   PetscFunctionReturn(0);
27382877fffaSHong Zhang }
273997969023SHong Zhang 
2740cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_baij_mumps(Mat A,MatFactorType ftype,Mat *F)
274167877ebaSShri Abhyankar {
274267877ebaSShri Abhyankar   Mat            B;
274367877ebaSShri Abhyankar   PetscErrorCode ierr;
274467877ebaSShri Abhyankar   Mat_MUMPS      *mumps;
2745ace3abfcSBarry Smith   PetscBool      isSeqBAIJ;
274667877ebaSShri Abhyankar 
274767877ebaSShri Abhyankar   PetscFunctionBegin;
274867877ebaSShri Abhyankar   /* Create the factorization matrix */
2749251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr);
2750ce94432eSBarry Smith   ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
275167877ebaSShri Abhyankar   ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
2752e69c285eSBarry Smith   ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr);
2753e69c285eSBarry Smith   ierr = MatSetUp(B);CHKERRQ(ierr);
2754450b117fSShri Abhyankar 
2755b00a9115SJed Brown   ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr);
2756450b117fSShri Abhyankar   if (ftype == MAT_FACTOR_LU) {
2757450b117fSShri Abhyankar     B->ops->lufactorsymbolic = MatLUFactorSymbolic_BAIJMUMPS;
2758450b117fSShri Abhyankar     B->factortype            = MAT_FACTOR_LU;
2759bccb9932SShri Abhyankar     if (isSeqBAIJ) mumps->ConvertToTriples = MatConvertToTriples_seqbaij_seqaij;
2760bccb9932SShri Abhyankar     else mumps->ConvertToTriples = MatConvertToTriples_mpibaij_mpiaij;
2761746480a1SHong Zhang     mumps->sym = 0;
2762f23aa3ddSBarry Smith   } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc BAIJ matrices with MUMPS Cholesky, use SBAIJ or AIJ matrix instead\n");
2763bccb9932SShri Abhyankar 
2764e69c285eSBarry Smith   B->ops->getinfo     = MatGetInfo_External;
2765450b117fSShri Abhyankar   B->ops->view        = MatView_MUMPS;
27662205254eSKarl Rupp 
27673ca39a21SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr);
27685a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr);
27695a05ddb0SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr);
2770bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr);
2771bc6112feSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr);
2772bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr);
2773bc6112feSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr);
2774ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr);
2775ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr);
2776ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr);
2777ca810319SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr);
277889a9c03aSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverse_C",MatMumpsGetInverse_MUMPS);CHKERRQ(ierr);
2779eef1237cSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInverseTranspose_C",MatMumpsGetInverseTranspose_MUMPS);CHKERRQ(ierr);
2780450b117fSShri Abhyankar 
278100c67f3bSHong Zhang   /* set solvertype */
278200c67f3bSHong Zhang   ierr = PetscFree(B->solvertype);CHKERRQ(ierr);
278300c67f3bSHong Zhang   ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr);
278400c67f3bSHong Zhang 
27857ee00b23SStefano Zampini   B->ops->destroy = MatDestroy_MUMPS;
27867ee00b23SStefano Zampini   B->data         = (void*)mumps;
27877ee00b23SStefano Zampini 
27887ee00b23SStefano Zampini   ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr);
27897ee00b23SStefano Zampini 
27907ee00b23SStefano Zampini   *F = B;
27917ee00b23SStefano Zampini   PetscFunctionReturn(0);
27927ee00b23SStefano Zampini }
27937ee00b23SStefano Zampini 
27947ee00b23SStefano Zampini /* MatGetFactor for Seq and MPI SELL matrices */
27957ee00b23SStefano Zampini static PetscErrorCode MatGetFactor_sell_mumps(Mat A,MatFactorType ftype,Mat *F)
27967ee00b23SStefano Zampini {
27977ee00b23SStefano Zampini   Mat            B;
27987ee00b23SStefano Zampini   PetscErrorCode ierr;
27997ee00b23SStefano Zampini   Mat_MUMPS      *mumps;
28007ee00b23SStefano Zampini   PetscBool      isSeqSELL;
28017ee00b23SStefano Zampini 
28027ee00b23SStefano Zampini   PetscFunctionBegin;
28037ee00b23SStefano Zampini   /* Create the factorization matrix */
28047ee00b23SStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSELL,&isSeqSELL);CHKERRQ(ierr);
28057ee00b23SStefano Zampini   ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
28067ee00b23SStefano Zampini   ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
28077ee00b23SStefano Zampini   ierr = PetscStrallocpy("mumps",&((PetscObject)B)->type_name);CHKERRQ(ierr);
28087ee00b23SStefano Zampini   ierr = MatSetUp(B);CHKERRQ(ierr);
28097ee00b23SStefano Zampini 
28107ee00b23SStefano Zampini   ierr = PetscNewLog(B,&mumps);CHKERRQ(ierr);
28117ee00b23SStefano Zampini 
28127ee00b23SStefano Zampini   B->ops->view        = MatView_MUMPS;
28137ee00b23SStefano Zampini   B->ops->getinfo     = MatGetInfo_MUMPS;
28147ee00b23SStefano Zampini 
28157ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_mumps);CHKERRQ(ierr);
28167ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MUMPS);CHKERRQ(ierr);
28177ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MUMPS);CHKERRQ(ierr);
28187ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetIcntl_C",MatMumpsSetIcntl_MUMPS);CHKERRQ(ierr);
28197ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetIcntl_C",MatMumpsGetIcntl_MUMPS);CHKERRQ(ierr);
28207ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsSetCntl_C",MatMumpsSetCntl_MUMPS);CHKERRQ(ierr);
28217ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetCntl_C",MatMumpsGetCntl_MUMPS);CHKERRQ(ierr);
28227ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfo_C",MatMumpsGetInfo_MUMPS);CHKERRQ(ierr);
28237ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetInfog_C",MatMumpsGetInfog_MUMPS);CHKERRQ(ierr);
28247ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfo_C",MatMumpsGetRinfo_MUMPS);CHKERRQ(ierr);
28257ee00b23SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMumpsGetRinfog_C",MatMumpsGetRinfog_MUMPS);CHKERRQ(ierr);
28267ee00b23SStefano Zampini 
28277ee00b23SStefano Zampini   if (ftype == MAT_FACTOR_LU) {
28287ee00b23SStefano Zampini     B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMUMPS;
28297ee00b23SStefano Zampini     B->factortype            = MAT_FACTOR_LU;
28307ee00b23SStefano Zampini     if (isSeqSELL) mumps->ConvertToTriples = MatConvertToTriples_seqsell_seqaij;
28317ee00b23SStefano Zampini     else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented");
28327ee00b23SStefano Zampini     mumps->sym = 0;
28337ee00b23SStefano Zampini   } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"To be implemented");
28347ee00b23SStefano Zampini 
28357ee00b23SStefano Zampini   /* set solvertype */
28367ee00b23SStefano Zampini   ierr = PetscFree(B->solvertype);CHKERRQ(ierr);
28377ee00b23SStefano Zampini   ierr = PetscStrallocpy(MATSOLVERMUMPS,&B->solvertype);CHKERRQ(ierr);
28387ee00b23SStefano Zampini 
2839450b117fSShri Abhyankar   B->ops->destroy = MatDestroy_MUMPS;
2840e69c285eSBarry Smith   B->data         = (void*)mumps;
28412205254eSKarl Rupp 
2842f697e70eSHong Zhang   ierr = PetscInitializeMUMPS(A,mumps);CHKERRQ(ierr);
2843746480a1SHong Zhang 
2844450b117fSShri Abhyankar   *F = B;
2845450b117fSShri Abhyankar   PetscFunctionReturn(0);
2846450b117fSShri Abhyankar }
284742c9c57cSBarry Smith 
28483ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_MUMPS(void)
284942c9c57cSBarry Smith {
285042c9c57cSBarry Smith   PetscErrorCode ierr;
285142c9c57cSBarry Smith 
285242c9c57cSBarry Smith   PetscFunctionBegin;
28533ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr);
28543ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr);
28553ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr);
28563ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPIBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr);
28573ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATMPISBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr);
28583ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mumps);CHKERRQ(ierr);
28593ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mumps);CHKERRQ(ierr);
28603ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_LU,MatGetFactor_baij_mumps);CHKERRQ(ierr);
28613ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_baij_mumps);CHKERRQ(ierr);
28623ca39a21SBarry Smith   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_sbaij_mumps);CHKERRQ(ierr);
28637ee00b23SStefano Zampini   ierr = MatSolverTypeRegister(MATSOLVERMUMPS,MATSEQSELL,MAT_FACTOR_LU,MatGetFactor_sell_mumps);CHKERRQ(ierr);
286442c9c57cSBarry Smith   PetscFunctionReturn(0);
286542c9c57cSBarry Smith }
286642c9c57cSBarry Smith 
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