13bf14a46SMatthew Knepley /* 23bf14a46SMatthew Knepley Provides an interface to the PaStiX sparse solver 33bf14a46SMatthew Knepley */ 4c6db04a5SJed Brown #include <../src/mat/impls/aij/seq/aij.h> 5c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> 6c6db04a5SJed Brown #include <../src/mat/impls/sbaij/seq/sbaij.h> 7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> 83bf14a46SMatthew Knepley 9dbbbd53dSSatish Balay #if defined(PETSC_USE_COMPLEX) 105ec454cfSSatish Balay #define _H_COMPLEX 115ec454cfSSatish Balay #endif 125ec454cfSSatish Balay 133bf14a46SMatthew Knepley EXTERN_C_BEGIN 14c6db04a5SJed Brown #include <pastix.h> 153bf14a46SMatthew Knepley EXTERN_C_END 163bf14a46SMatthew Knepley 17519f805aSKarl Rupp #if defined(PETSC_USE_COMPLEX) 18519f805aSKarl Rupp #if defined(PETSC_USE_REAL_SINGLE) 195ec454cfSSatish Balay #define PASTIX_CALL c_pastix 205ec454cfSSatish Balay #else 215ec454cfSSatish Balay #define PASTIX_CALL z_pastix 225ec454cfSSatish Balay #endif 23d41469e0Sxavier lacoste 24d41469e0Sxavier lacoste #else /* PETSC_USE_COMPLEX */ 25d41469e0Sxavier lacoste 26519f805aSKarl Rupp #if defined(PETSC_USE_REAL_SINGLE) 275ec454cfSSatish Balay #define PASTIX_CALL s_pastix 285ec454cfSSatish Balay #else 295ec454cfSSatish Balay #define PASTIX_CALL d_pastix 305ec454cfSSatish Balay #endif 31d41469e0Sxavier lacoste 32d41469e0Sxavier lacoste #endif /* PETSC_USE_COMPLEX */ 33d41469e0Sxavier lacoste 34dbbbd53dSSatish Balay typedef PetscScalar PastixScalar; 35dbbbd53dSSatish Balay 363bf14a46SMatthew Knepley typedef struct Mat_Pastix_ { 373bf14a46SMatthew Knepley pastix_data_t *pastix_data; /* Pastix data storage structure */ 383bf14a46SMatthew Knepley MatStructure matstruc; 393bf14a46SMatthew Knepley PetscInt n; /* Number of columns in the matrix */ 403bf14a46SMatthew Knepley PetscInt *colptr; /* Index of first element of each column in row and val */ 413bf14a46SMatthew Knepley PetscInt *row; /* Row of each element of the matrix */ 423bf14a46SMatthew Knepley PetscScalar *val; /* Value of each element of the matrix */ 433bf14a46SMatthew Knepley PetscInt *perm; /* Permutation tabular */ 443bf14a46SMatthew Knepley PetscInt *invp; /* Reverse permutation tabular */ 453bf14a46SMatthew Knepley PetscScalar *rhs; /* Rhight-hand-side member */ 463bf14a46SMatthew Knepley PetscInt rhsnbr; /* Rhight-hand-side number (must be 1) */ 47baed9decSBarry Smith PetscInt iparm[IPARM_SIZE]; /* Integer parameters */ 48baed9decSBarry Smith double dparm[DPARM_SIZE]; /* Floating point parameters */ 493bf14a46SMatthew Knepley MPI_Comm pastix_comm; /* PaStiX MPI communicator */ 503bf14a46SMatthew Knepley PetscMPIInt commRank; /* MPI rank */ 513bf14a46SMatthew Knepley PetscMPIInt commSize; /* MPI communicator size */ 52ace3abfcSBarry Smith PetscBool CleanUpPastix; /* Boolean indicating if we call PaStiX clean step */ 533bf14a46SMatthew Knepley VecScatter scat_rhs; 543bf14a46SMatthew Knepley VecScatter scat_sol; 55f31ce8a6SBarry Smith Vec b_seq; 563bf14a46SMatthew Knepley } Mat_Pastix; 573bf14a46SMatthew Knepley 5809573ac7SBarry Smith extern PetscErrorCode MatDuplicate_Pastix(Mat,MatDuplicateOption,Mat*); 593bf14a46SMatthew Knepley 603bf14a46SMatthew Knepley /* 613bf14a46SMatthew Knepley convert Petsc seqaij matrix to CSC: colptr[n], row[nz], val[nz] 623bf14a46SMatthew Knepley 633bf14a46SMatthew Knepley input: 643bf14a46SMatthew Knepley A - matrix in seqaij or mpisbaij (bs=1) format 653bf14a46SMatthew Knepley valOnly - FALSE: spaces are allocated and values are set for the CSC 663bf14a46SMatthew Knepley TRUE: Only fill values 673bf14a46SMatthew Knepley output: 683bf14a46SMatthew Knepley n - Size of the matrix 693bf14a46SMatthew Knepley colptr - Index of first element of each column in row and val 703bf14a46SMatthew Knepley row - Row of each element of the matrix 713bf14a46SMatthew Knepley values - Value of each element of the matrix 723bf14a46SMatthew Knepley */ 73ace3abfcSBarry Smith PetscErrorCode MatConvertToCSC(Mat A,PetscBool valOnly,PetscInt *n,PetscInt **colptr,PetscInt **row,PetscScalar **values) 7441c8de11SBarry Smith { 753bf14a46SMatthew Knepley Mat_SeqAIJ *aa = (Mat_SeqAIJ*)A->data; 763bf14a46SMatthew Knepley PetscInt *rowptr = aa->i; 773bf14a46SMatthew Knepley PetscInt *col = aa->j; 783bf14a46SMatthew Knepley PetscScalar *rvalues = aa->a; 793bf14a46SMatthew Knepley PetscInt m = A->rmap->N; 80745c78f7SBarry Smith PetscInt nnz; 813bf14a46SMatthew Knepley PetscInt i,j, k; 823bf14a46SMatthew Knepley PetscInt base = 1; 833bf14a46SMatthew Knepley PetscInt idx; 843bf14a46SMatthew Knepley PetscInt colidx; 853bf14a46SMatthew Knepley PetscInt *colcount; 86ace3abfcSBarry Smith PetscBool isSBAIJ; 87ace3abfcSBarry Smith PetscBool isSeqSBAIJ; 88ace3abfcSBarry Smith PetscBool isMpiSBAIJ; 89ace3abfcSBarry Smith PetscBool isSym; 903bf14a46SMatthew Knepley 913bf14a46SMatthew Knepley PetscFunctionBegin; 929566063dSJacob Faibussowitsch PetscCall(MatIsSymmetric(A,0.0,&isSym)); 939566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A,MATSBAIJ,&isSBAIJ)); 949566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ)); 959566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A,MATMPISBAIJ,&isMpiSBAIJ)); 963bf14a46SMatthew Knepley 97745c78f7SBarry Smith *n = A->cmap->N; 98745c78f7SBarry Smith 99745c78f7SBarry Smith /* PaStiX only needs triangular matrix if matrix is symmetric 100745c78f7SBarry Smith */ 1012205254eSKarl Rupp if (isSym && !(isSBAIJ || isSeqSBAIJ || isMpiSBAIJ)) nnz = (aa->nz - *n)/2 + *n; 1022205254eSKarl Rupp else nnz = aa->nz; 1033bf14a46SMatthew Knepley 1043bf14a46SMatthew Knepley if (!valOnly) { 1059566063dSJacob Faibussowitsch PetscCall(PetscMalloc1((*n)+1,colptr)); 1069566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nnz,row)); 1079566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nnz,values)); 1083bf14a46SMatthew Knepley 10941c8de11SBarry Smith if (isSBAIJ || isSeqSBAIJ || isMpiSBAIJ) { 1109566063dSJacob Faibussowitsch PetscCall(PetscArraycpy (*colptr, rowptr, (*n)+1)); 1112205254eSKarl Rupp for (i = 0; i < *n+1; i++) (*colptr)[i] += base; 1129566063dSJacob Faibussowitsch PetscCall(PetscArraycpy (*row, col, nnz)); 1132205254eSKarl Rupp for (i = 0; i < nnz; i++) (*row)[i] += base; 1149566063dSJacob Faibussowitsch PetscCall(PetscArraycpy (*values, rvalues, nnz)); 11541c8de11SBarry Smith } else { 1169566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(*n,&colcount)); 11741c8de11SBarry Smith 118f31ce8a6SBarry Smith for (i = 0; i < m; i++) colcount[i] = 0; 1193bf14a46SMatthew Knepley /* Fill-in colptr */ 120f31ce8a6SBarry Smith for (i = 0; i < m; i++) { 121f31ce8a6SBarry Smith for (j = rowptr[i]; j < rowptr[i+1]; j++) { 122f31ce8a6SBarry Smith if (!isSym || col[j] <= i) colcount[col[j]]++; 123f31ce8a6SBarry Smith } 124f31ce8a6SBarry Smith } 125745c78f7SBarry Smith 1263bf14a46SMatthew Knepley (*colptr)[0] = base; 1273bf14a46SMatthew Knepley for (j = 0; j < *n; j++) { 1283bf14a46SMatthew Knepley (*colptr)[j+1] = (*colptr)[j] + colcount[j]; 129745c78f7SBarry Smith /* in next loop we fill starting from (*colptr)[colidx] - base */ 1303bf14a46SMatthew Knepley colcount[j] = -base; 1313bf14a46SMatthew Knepley } 1323bf14a46SMatthew Knepley 1333bf14a46SMatthew Knepley /* Fill-in rows and values */ 1343bf14a46SMatthew Knepley for (i = 0; i < m; i++) { 1353bf14a46SMatthew Knepley for (j = rowptr[i]; j < rowptr[i+1]; j++) { 13641c8de11SBarry Smith if (!isSym || col[j] <= i) { 1373bf14a46SMatthew Knepley colidx = col[j]; 1383bf14a46SMatthew Knepley idx = (*colptr)[colidx] + colcount[colidx]; 1393bf14a46SMatthew Knepley (*row)[idx] = i + base; 1403bf14a46SMatthew Knepley (*values)[idx] = rvalues[j]; 1413bf14a46SMatthew Knepley colcount[colidx]++; 1423bf14a46SMatthew Knepley } 1433bf14a46SMatthew Knepley } 1443bf14a46SMatthew Knepley } 1459566063dSJacob Faibussowitsch PetscCall(PetscFree(colcount)); 146745c78f7SBarry Smith } 14741c8de11SBarry Smith } else { 148745c78f7SBarry Smith /* Fill-in only values */ 1493bf14a46SMatthew Knepley for (i = 0; i < m; i++) { 1503bf14a46SMatthew Knepley for (j = rowptr[i]; j < rowptr[i+1]; j++) { 1513bf14a46SMatthew Knepley colidx = col[j]; 1522205254eSKarl Rupp if ((isSBAIJ || isSeqSBAIJ || isMpiSBAIJ) ||!isSym || col[j] <= i) { 153745c78f7SBarry Smith /* look for the value to fill */ 154f31ce8a6SBarry Smith for (k = (*colptr)[colidx] - base; k < (*colptr)[colidx + 1] - base; k++) { 155eb1f6c34SBarry Smith if (((*row)[k]-base) == i) { 1563bf14a46SMatthew Knepley (*values)[k] = rvalues[j]; 1573bf14a46SMatthew Knepley break; 1583bf14a46SMatthew Knepley } 1593bf14a46SMatthew Knepley } 160f31ce8a6SBarry Smith /* data structure of sparse matrix has changed */ 161aed4548fSBarry Smith PetscCheck(k != (*colptr)[colidx + 1] - base,PETSC_COMM_SELF,PETSC_ERR_PLIB,"overflow on k %" PetscInt_FMT,k); 1623bf14a46SMatthew Knepley } 1633bf14a46SMatthew Knepley } 1643bf14a46SMatthew Knepley } 165745c78f7SBarry Smith } 1663bf14a46SMatthew Knepley PetscFunctionReturn(0); 1673bf14a46SMatthew Knepley } 1683bf14a46SMatthew Knepley 1693bf14a46SMatthew Knepley /* 1703bf14a46SMatthew Knepley Call clean step of PaStiX if lu->CleanUpPastix == true. 1713bf14a46SMatthew Knepley Free the CSC matrix. 1723bf14a46SMatthew Knepley */ 1733bf14a46SMatthew Knepley PetscErrorCode MatDestroy_Pastix(Mat A) 1743bf14a46SMatthew Knepley { 17558c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix*)A->data; 176745c78f7SBarry Smith 1773bf14a46SMatthew Knepley PetscFunctionBegin; 17858c95f1bSBarry Smith if (lu->CleanUpPastix) { 1793bf14a46SMatthew Knepley /* Terminate instance, deallocate memories */ 1809566063dSJacob Faibussowitsch PetscCall(VecScatterDestroy(&lu->scat_rhs)); 1819566063dSJacob Faibussowitsch PetscCall(VecDestroy(&lu->b_seq)); 1829566063dSJacob Faibussowitsch PetscCall(VecScatterDestroy(&lu->scat_sol)); 1833bf14a46SMatthew Knepley 1843bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK]=API_TASK_CLEAN; 1853bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] =API_TASK_CLEAN; 1863bf14a46SMatthew Knepley 187d41469e0Sxavier lacoste PASTIX_CALL(&(lu->pastix_data), 1883bf14a46SMatthew Knepley lu->pastix_comm, 189d41469e0Sxavier lacoste lu->n, 190d41469e0Sxavier lacoste lu->colptr, 191d41469e0Sxavier lacoste lu->row, 1925ec454cfSSatish Balay (PastixScalar*)lu->val, 193d41469e0Sxavier lacoste lu->perm, 194d41469e0Sxavier lacoste lu->invp, 1955ec454cfSSatish Balay (PastixScalar*)lu->rhs, 196d41469e0Sxavier lacoste lu->rhsnbr, 197d41469e0Sxavier lacoste lu->iparm, 1983bf14a46SMatthew Knepley lu->dparm); 19908401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0,PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by PaStiX in destroy: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT,lu->iparm[IPARM_ERROR_NUMBER]); 2009566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->colptr)); 2019566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->row)); 2029566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->val)); 2039566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->perm)); 2049566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->invp)); 2059566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_free(&(lu->pastix_comm))); 2063bf14a46SMatthew Knepley } 207*2e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL)); 2089566063dSJacob Faibussowitsch PetscCall(PetscFree(A->data)); 2093bf14a46SMatthew Knepley PetscFunctionReturn(0); 2103bf14a46SMatthew Knepley } 2113bf14a46SMatthew Knepley 2123bf14a46SMatthew Knepley /* 2133bf14a46SMatthew Knepley Gather right-hand-side. 2143bf14a46SMatthew Knepley Call for Solve step. 2153bf14a46SMatthew Knepley Scatter solution. 2163bf14a46SMatthew Knepley */ 2173bf14a46SMatthew Knepley PetscErrorCode MatSolve_PaStiX(Mat A,Vec b,Vec x) 2183bf14a46SMatthew Knepley { 21958c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix*)A->data; 2203bf14a46SMatthew Knepley PetscScalar *array; 2213bf14a46SMatthew Knepley Vec x_seq; 2223bf14a46SMatthew Knepley 2233bf14a46SMatthew Knepley PetscFunctionBegin; 2243bf14a46SMatthew Knepley lu->rhsnbr = 1; 2253bf14a46SMatthew Knepley x_seq = lu->b_seq; 2263bf14a46SMatthew Knepley if (lu->commSize > 1) { 22741ffd417SStefano Zampini /* PaStiX only supports centralized rhs. Scatter b into a sequential rhs vector */ 2289566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(lu->scat_rhs,b,x_seq,INSERT_VALUES,SCATTER_FORWARD)); 2299566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(lu->scat_rhs,b,x_seq,INSERT_VALUES,SCATTER_FORWARD)); 2309566063dSJacob Faibussowitsch PetscCall(VecGetArray(x_seq,&array)); 23141c8de11SBarry Smith } else { /* size == 1 */ 2329566063dSJacob Faibussowitsch PetscCall(VecCopy(b,x)); 2339566063dSJacob Faibussowitsch PetscCall(VecGetArray(x,&array)); 2343bf14a46SMatthew Knepley } 2353bf14a46SMatthew Knepley lu->rhs = array; 2363bf14a46SMatthew Knepley if (lu->commSize == 1) { 2379566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x,&array)); 2383bf14a46SMatthew Knepley } else { 2399566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x_seq,&array)); 2403bf14a46SMatthew Knepley } 2413bf14a46SMatthew Knepley 2423bf14a46SMatthew Knepley /* solve phase */ 2433bf14a46SMatthew Knepley /*-------------*/ 2443bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_SOLVE; 2453bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_REFINE; 246745c78f7SBarry Smith lu->iparm[IPARM_RHS_MAKING] = API_RHS_B; 2473bf14a46SMatthew Knepley 248d41469e0Sxavier lacoste PASTIX_CALL(&(lu->pastix_data), 249d41469e0Sxavier lacoste lu->pastix_comm, 250d41469e0Sxavier lacoste lu->n, 251d41469e0Sxavier lacoste lu->colptr, 252d41469e0Sxavier lacoste lu->row, 2535ec454cfSSatish Balay (PastixScalar*)lu->val, 254d41469e0Sxavier lacoste lu->perm, 255d41469e0Sxavier lacoste lu->invp, 2565ec454cfSSatish Balay (PastixScalar*)lu->rhs, 257d41469e0Sxavier lacoste lu->rhsnbr, 258d41469e0Sxavier lacoste lu->iparm, 259d41469e0Sxavier lacoste lu->dparm); 26008401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0,PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by PaStiX in solve phase: lu->iparm[IPARM_ERROR_NUMBER] = %" PetscInt_FMT,lu->iparm[IPARM_ERROR_NUMBER]); 2613bf14a46SMatthew Knepley 2623bf14a46SMatthew Knepley if (lu->commSize == 1) { 2639566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x,&(lu->rhs))); 2643bf14a46SMatthew Knepley } else { 2659566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x_seq,&(lu->rhs))); 2663bf14a46SMatthew Knepley } 2673bf14a46SMatthew Knepley 2683bf14a46SMatthew Knepley if (lu->commSize > 1) { /* convert PaStiX centralized solution to petsc mpi x */ 2699566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(lu->scat_sol,x_seq,x,INSERT_VALUES,SCATTER_FORWARD)); 2709566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(lu->scat_sol,x_seq,x,INSERT_VALUES,SCATTER_FORWARD)); 2713bf14a46SMatthew Knepley } 2723bf14a46SMatthew Knepley PetscFunctionReturn(0); 2733bf14a46SMatthew Knepley } 2743bf14a46SMatthew Knepley 2753bf14a46SMatthew Knepley /* 2763bf14a46SMatthew Knepley Numeric factorisation using PaStiX solver. 2773bf14a46SMatthew Knepley 2783bf14a46SMatthew Knepley */ 2793bf14a46SMatthew Knepley PetscErrorCode MatFactorNumeric_PaStiX(Mat F,Mat A,const MatFactorInfo *info) 2803bf14a46SMatthew Knepley { 28158c95f1bSBarry Smith Mat_Pastix *lu =(Mat_Pastix*)(F)->data; 28241c8de11SBarry Smith Mat *tseq; 283b5e56a35SBarry Smith PetscInt icntl; 284b5e56a35SBarry Smith PetscInt M=A->rmap->N; 285ace3abfcSBarry Smith PetscBool valOnly,flg, isSym; 2863bf14a46SMatthew Knepley IS is_iden; 2873bf14a46SMatthew Knepley Vec b; 2883bf14a46SMatthew Knepley IS isrow; 28951a30905SBarry Smith PetscBool isSeqAIJ,isSeqSBAIJ,isMPIAIJ; 2903bf14a46SMatthew Knepley 2913bf14a46SMatthew Knepley PetscFunctionBegin; 2929566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ)); 2939566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&isMPIAIJ)); 2949566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ)); 2953bf14a46SMatthew Knepley if (lu->matstruc == DIFFERENT_NONZERO_PATTERN) { 2963bf14a46SMatthew Knepley (F)->ops->solve = MatSolve_PaStiX; 2973bf14a46SMatthew Knepley 2983bf14a46SMatthew Knepley /* Initialize a PASTIX instance */ 2999566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_dup(PetscObjectComm((PetscObject)A),&(lu->pastix_comm))); 3009566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(lu->pastix_comm, &lu->commRank)); 3019566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(lu->pastix_comm, &lu->commSize)); 3023bf14a46SMatthew Knepley 3033bf14a46SMatthew Knepley /* Set pastix options */ 3043bf14a46SMatthew Knepley lu->iparm[IPARM_MODIFY_PARAMETER] = API_NO; 3053bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_INIT; 3063bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_INIT; 3072205254eSKarl Rupp 3083bf14a46SMatthew Knepley lu->rhsnbr = 1; 3093bf14a46SMatthew Knepley 3103bf14a46SMatthew Knepley /* Call to set default pastix options */ 311d41469e0Sxavier lacoste PASTIX_CALL(&(lu->pastix_data), 312d41469e0Sxavier lacoste lu->pastix_comm, 313d41469e0Sxavier lacoste lu->n, 314d41469e0Sxavier lacoste lu->colptr, 315d41469e0Sxavier lacoste lu->row, 3165ec454cfSSatish Balay (PastixScalar*)lu->val, 317d41469e0Sxavier lacoste lu->perm, 318d41469e0Sxavier lacoste lu->invp, 3195ec454cfSSatish Balay (PastixScalar*)lu->rhs, 320d41469e0Sxavier lacoste lu->rhsnbr, 321d41469e0Sxavier lacoste lu->iparm, 322d41469e0Sxavier lacoste lu->dparm); 32308401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0,PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by PaStiX in MatFactorNumeric: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT,lu->iparm[IPARM_ERROR_NUMBER]); 3243bf14a46SMatthew Knepley 325d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"PaStiX Options","Mat"); 3263bf14a46SMatthew Knepley icntl = -1; 32741c8de11SBarry Smith lu->iparm[IPARM_VERBOSE] = API_VERBOSE_NOT; 3289566063dSJacob Faibussowitsch PetscCall(PetscOptionsInt("-mat_pastix_verbose","iparm[IPARM_VERBOSE] : level of printing (0 to 2)","None",lu->iparm[IPARM_VERBOSE],&icntl,&flg)); 329d41469e0Sxavier lacoste if ((flg && icntl >= 0) || PetscLogPrintInfo) { 3303bf14a46SMatthew Knepley lu->iparm[IPARM_VERBOSE] = icntl; 3313bf14a46SMatthew Knepley } 3323bf14a46SMatthew Knepley icntl=-1; 3339566063dSJacob Faibussowitsch PetscCall(PetscOptionsInt("-mat_pastix_threadnbr","iparm[IPARM_THREAD_NBR] : Number of thread by MPI node","None",lu->iparm[IPARM_THREAD_NBR],&icntl,&flg)); 3343bf14a46SMatthew Knepley if ((flg && icntl > 0)) { 3353bf14a46SMatthew Knepley lu->iparm[IPARM_THREAD_NBR] = icntl; 3363bf14a46SMatthew Knepley } 337d0609cedSBarry Smith PetscOptionsEnd(); 3383bf14a46SMatthew Knepley valOnly = PETSC_FALSE; 33941c8de11SBarry Smith } else { 3405d6241c8SBarry Smith if (isSeqAIJ || isMPIAIJ) { 3419566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->colptr)); 3429566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->row)); 3439566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->val)); 3445d6241c8SBarry Smith valOnly = PETSC_FALSE; 3455d6241c8SBarry Smith } else valOnly = PETSC_TRUE; 3463bf14a46SMatthew Knepley } 3473bf14a46SMatthew Knepley 3483bf14a46SMatthew Knepley lu->iparm[IPARM_MATRIX_VERIFICATION] = API_YES; 3493bf14a46SMatthew Knepley 3503bf14a46SMatthew Knepley /* convert mpi A to seq mat A */ 3519566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF,M,0,1,&isrow)); 3529566063dSJacob Faibussowitsch PetscCall(MatCreateSubMatrices(A,1,&isrow,&isrow,MAT_INITIAL_MATRIX,&tseq)); 3539566063dSJacob Faibussowitsch PetscCall(ISDestroy(&isrow)); 3543bf14a46SMatthew Knepley 3559566063dSJacob Faibussowitsch PetscCall(MatConvertToCSC(*tseq,valOnly, &lu->n, &lu->colptr, &lu->row, &lu->val)); 3569566063dSJacob Faibussowitsch PetscCall(MatIsSymmetric(*tseq,0.0,&isSym)); 3579566063dSJacob Faibussowitsch PetscCall(MatDestroyMatrices(1,&tseq)); 35841c8de11SBarry Smith 3595d6241c8SBarry Smith if (!lu->perm) { 3609566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(lu->n,&(lu->perm))); 3619566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(lu->n,&(lu->invp))); 3625d6241c8SBarry Smith } 3633bf14a46SMatthew Knepley 3643bf14a46SMatthew Knepley if (isSym) { 365745c78f7SBarry Smith /* On symmetric matrix, LLT */ 3663bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_YES; 36741c8de11SBarry Smith lu->iparm[IPARM_FACTORIZATION] = API_FACT_LDLT; 368f31ce8a6SBarry Smith } else { 369745c78f7SBarry Smith /* On unsymmetric matrix, LU */ 3703bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_NO; 3713bf14a46SMatthew Knepley lu->iparm[IPARM_FACTORIZATION] = API_FACT_LU; 3723bf14a46SMatthew Knepley } 3733bf14a46SMatthew Knepley 3743bf14a46SMatthew Knepley /*----------------*/ 3753bf14a46SMatthew Knepley if (lu->matstruc == DIFFERENT_NONZERO_PATTERN) { 37658c95f1bSBarry Smith if (!(isSeqAIJ || isSeqSBAIJ) && !lu->b_seq) { 3773bf14a46SMatthew Knepley /* PaStiX only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 3789566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF,A->cmap->N,&lu->b_seq)); 3799566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF,A->cmap->N,0,1,&is_iden)); 3809566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A,NULL,&b)); 3819566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(b,is_iden,lu->b_seq,is_iden,&lu->scat_rhs)); 3829566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(lu->b_seq,is_iden,b,is_iden,&lu->scat_sol)); 3839566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is_iden)); 3849566063dSJacob Faibussowitsch PetscCall(VecDestroy(&b)); 3853bf14a46SMatthew Knepley } 3863bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_ORDERING; 3873bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_NUMFACT; 3883bf14a46SMatthew Knepley 389d41469e0Sxavier lacoste PASTIX_CALL(&(lu->pastix_data), 390d41469e0Sxavier lacoste lu->pastix_comm, 391d41469e0Sxavier lacoste lu->n, 392d41469e0Sxavier lacoste lu->colptr, 393d41469e0Sxavier lacoste lu->row, 3945ec454cfSSatish Balay (PastixScalar*)lu->val, 395d41469e0Sxavier lacoste lu->perm, 396d41469e0Sxavier lacoste lu->invp, 3975ec454cfSSatish Balay (PastixScalar*)lu->rhs, 398d41469e0Sxavier lacoste lu->rhsnbr, 399d41469e0Sxavier lacoste lu->iparm, 400d41469e0Sxavier lacoste lu->dparm); 40108401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0,PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by PaStiX in analysis phase: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT,lu->iparm[IPARM_ERROR_NUMBER]); 40241c8de11SBarry Smith } else { 4033bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_NUMFACT; 4043bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_NUMFACT; 405d41469e0Sxavier lacoste PASTIX_CALL(&(lu->pastix_data), 406d41469e0Sxavier lacoste lu->pastix_comm, 407d41469e0Sxavier lacoste lu->n, 408d41469e0Sxavier lacoste lu->colptr, 409d41469e0Sxavier lacoste lu->row, 4105ec454cfSSatish Balay (PastixScalar*)lu->val, 411d41469e0Sxavier lacoste lu->perm, 412d41469e0Sxavier lacoste lu->invp, 4135ec454cfSSatish Balay (PastixScalar*)lu->rhs, 414d41469e0Sxavier lacoste lu->rhsnbr, 415d41469e0Sxavier lacoste lu->iparm, 416d41469e0Sxavier lacoste lu->dparm); 41708401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0,PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by PaStiX in analysis phase: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT,lu->iparm[IPARM_ERROR_NUMBER]); 4183bf14a46SMatthew Knepley } 4193bf14a46SMatthew Knepley 4203bf14a46SMatthew Knepley (F)->assembled = PETSC_TRUE; 4213bf14a46SMatthew Knepley lu->matstruc = SAME_NONZERO_PATTERN; 4223bf14a46SMatthew Knepley lu->CleanUpPastix = PETSC_TRUE; 4233bf14a46SMatthew Knepley PetscFunctionReturn(0); 4243bf14a46SMatthew Knepley } 4253bf14a46SMatthew Knepley 4263bf14a46SMatthew Knepley /* Note the Petsc r and c permutations are ignored */ 4273bf14a46SMatthew Knepley PetscErrorCode MatLUFactorSymbolic_AIJPASTIX(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 4283bf14a46SMatthew Knepley { 42958c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix*)F->data; 4303bf14a46SMatthew Knepley 4313bf14a46SMatthew Knepley PetscFunctionBegin; 4323bf14a46SMatthew Knepley lu->iparm[IPARM_FACTORIZATION] = API_FACT_LU; 4333bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_YES; 4343bf14a46SMatthew Knepley lu->matstruc = DIFFERENT_NONZERO_PATTERN; 4353bf14a46SMatthew Knepley F->ops->lufactornumeric = MatFactorNumeric_PaStiX; 4363bf14a46SMatthew Knepley PetscFunctionReturn(0); 4373bf14a46SMatthew Knepley } 4383bf14a46SMatthew Knepley 4393bf14a46SMatthew Knepley PetscErrorCode MatCholeskyFactorSymbolic_SBAIJPASTIX(Mat F,Mat A,IS r,const MatFactorInfo *info) 4403bf14a46SMatthew Knepley { 44158c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix*)(F)->data; 4423bf14a46SMatthew Knepley 4433bf14a46SMatthew Knepley PetscFunctionBegin; 4443bf14a46SMatthew Knepley lu->iparm[IPARM_FACTORIZATION] = API_FACT_LLT; 4453bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_NO; 4463bf14a46SMatthew Knepley lu->matstruc = DIFFERENT_NONZERO_PATTERN; 4473bf14a46SMatthew Knepley (F)->ops->choleskyfactornumeric = MatFactorNumeric_PaStiX; 4483bf14a46SMatthew Knepley PetscFunctionReturn(0); 4493bf14a46SMatthew Knepley } 4503bf14a46SMatthew Knepley 4513bf14a46SMatthew Knepley PetscErrorCode MatView_PaStiX(Mat A,PetscViewer viewer) 4523bf14a46SMatthew Knepley { 453ace3abfcSBarry Smith PetscBool iascii; 4543bf14a46SMatthew Knepley PetscViewerFormat format; 4553bf14a46SMatthew Knepley 4563bf14a46SMatthew Knepley PetscFunctionBegin; 4579566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii)); 4583bf14a46SMatthew Knepley if (iascii) { 4599566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer,&format)); 4603bf14a46SMatthew Knepley if (format == PETSC_VIEWER_ASCII_INFO) { 46158c95f1bSBarry Smith Mat_Pastix *lu=(Mat_Pastix*)A->data; 462b5e56a35SBarry Smith 4639566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer,"PaStiX run parameters:\n")); 4649566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer," Matrix type : %s \n",((lu->iparm[IPARM_SYM] == API_SYM_YES) ? "Symmetric" : "Unsymmetric"))); 4659566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer," Level of printing (0,1,2): %" PetscInt_FMT " \n",lu->iparm[IPARM_VERBOSE])); 4669566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer," Number of refinements iterations : %" PetscInt_FMT " \n",lu->iparm[IPARM_NBITER])); 4679566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF," Error : %g \n",lu->dparm[DPARM_RELATIVE_ERROR])); 4683bf14a46SMatthew Knepley } 4693bf14a46SMatthew Knepley } 4703bf14a46SMatthew Knepley PetscFunctionReturn(0); 4713bf14a46SMatthew Knepley } 4723bf14a46SMatthew Knepley 4733bf14a46SMatthew Knepley /*MC 4742692d6eeSBarry Smith MATSOLVERPASTIX - A solver package providing direct solvers (LU) for distributed 4753bf14a46SMatthew Knepley and sequential matrices via the external package PaStiX. 4763bf14a46SMatthew Knepley 47790b3b921SSatish Balay Use ./configure --download-pastix --download-ptscotch to have PETSc installed with PasTiX 478c2b89b5dSBarry Smith 4793ca39a21SBarry Smith Use -pc_type lu -pc_factor_mat_solver_type pastix to use this direct solver 4803bf14a46SMatthew Knepley 4813bf14a46SMatthew Knepley Options Database Keys: 482b5e56a35SBarry Smith + -mat_pastix_verbose <0,1,2> - print level 483b5e56a35SBarry Smith - -mat_pastix_threadnbr <integer> - Set the thread number by MPI task. 4843bf14a46SMatthew Knepley 48595452b02SPatrick Sanan Notes: 48695452b02SPatrick Sanan This only works for matrices with symmetric nonzero structure, if you pass it a matrix with 487baed9decSBarry Smith nonsymmetric structure PasTiX and hence PETSc return with an error. 488baed9decSBarry Smith 4893bf14a46SMatthew Knepley Level: beginner 4903bf14a46SMatthew Knepley 491db781477SPatrick Sanan .seealso: `PCFactorSetMatSolverType()`, `MatSolverType` 49241c8de11SBarry Smith 4933bf14a46SMatthew Knepley M*/ 4943bf14a46SMatthew Knepley 4953bf14a46SMatthew Knepley PetscErrorCode MatGetInfo_PaStiX(Mat A,MatInfoType flag,MatInfo *info) 4963bf14a46SMatthew Knepley { 49758c95f1bSBarry Smith Mat_Pastix *lu =(Mat_Pastix*)A->data; 4983bf14a46SMatthew Knepley 4993bf14a46SMatthew Knepley PetscFunctionBegin; 5003bf14a46SMatthew Knepley info->block_size = 1.0; 5013bf14a46SMatthew Knepley info->nz_allocated = lu->iparm[IPARM_NNZEROS]; 5023bf14a46SMatthew Knepley info->nz_used = lu->iparm[IPARM_NNZEROS]; 5033bf14a46SMatthew Knepley info->nz_unneeded = 0.0; 5043bf14a46SMatthew Knepley info->assemblies = 0.0; 5053bf14a46SMatthew Knepley info->mallocs = 0.0; 5063bf14a46SMatthew Knepley info->memory = 0.0; 5073bf14a46SMatthew Knepley info->fill_ratio_given = 0; 5083bf14a46SMatthew Knepley info->fill_ratio_needed = 0; 5093bf14a46SMatthew Knepley info->factor_mallocs = 0; 5103bf14a46SMatthew Knepley PetscFunctionReturn(0); 5113bf14a46SMatthew Knepley } 5123bf14a46SMatthew Knepley 513ea799195SBarry Smith static PetscErrorCode MatFactorGetSolverType_pastix(Mat A,MatSolverType *type) 5143bf14a46SMatthew Knepley { 5153bf14a46SMatthew Knepley PetscFunctionBegin; 5162692d6eeSBarry Smith *type = MATSOLVERPASTIX; 5173bf14a46SMatthew Knepley PetscFunctionReturn(0); 5183bf14a46SMatthew Knepley } 5193bf14a46SMatthew Knepley 5203bf14a46SMatthew Knepley /* 5213bf14a46SMatthew Knepley The seq and mpi versions of this function are the same 5223bf14a46SMatthew Knepley */ 523cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_seqaij_pastix(Mat A,MatFactorType ftype,Mat *F) 5243bf14a46SMatthew Knepley { 5253bf14a46SMatthew Knepley Mat B; 5263bf14a46SMatthew Knepley Mat_Pastix *pastix; 5273bf14a46SMatthew Knepley 5283bf14a46SMatthew Knepley PetscFunctionBegin; 5295f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_LU,PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc AIJ matrices with PaStiX Cholesky, use SBAIJ matrix"); 5303bf14a46SMatthew Knepley /* Create the factorization matrix */ 5319566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&B)); 5329566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N)); 5339566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix",&((PetscObject)B)->type_name)); 5349566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 5353bf14a46SMatthew Knepley 53666e17bc3SBarry Smith B->trivialsymbolic = PETSC_TRUE; 5373bf14a46SMatthew Knepley B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJPASTIX; 5383bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 5393bf14a46SMatthew Knepley B->ops->getinfo = MatGetInfo_PaStiX; 5402205254eSKarl Rupp 5419566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_pastix)); 5422205254eSKarl Rupp 543d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 5443bf14a46SMatthew Knepley 54500c67f3bSHong Zhang /* set solvertype */ 5469566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 5479566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX,&B->solvertype)); 54800c67f3bSHong Zhang 5499566063dSJacob Faibussowitsch PetscCall(PetscNewLog(B,&pastix)); 5502205254eSKarl Rupp 5513bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 5520298fd71SBarry Smith pastix->scat_rhs = NULL; 5530298fd71SBarry Smith pastix->scat_sol = NULL; 55458c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_External; 5553bf14a46SMatthew Knepley B->ops->destroy = MatDestroy_Pastix; 55658c95f1bSBarry Smith B->data = (void*)pastix; 5573bf14a46SMatthew Knepley 5583bf14a46SMatthew Knepley *F = B; 5593bf14a46SMatthew Knepley PetscFunctionReturn(0); 5603bf14a46SMatthew Knepley } 5613bf14a46SMatthew Knepley 562cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_mpiaij_pastix(Mat A,MatFactorType ftype,Mat *F) 5633bf14a46SMatthew Knepley { 5643bf14a46SMatthew Knepley Mat B; 5653bf14a46SMatthew Knepley Mat_Pastix *pastix; 5663bf14a46SMatthew Knepley 5673bf14a46SMatthew Knepley PetscFunctionBegin; 5685f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_LU,PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc AIJ matrices with PaStiX Cholesky, use SBAIJ matrix"); 5693bf14a46SMatthew Knepley /* Create the factorization matrix */ 5709566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&B)); 5719566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N)); 5729566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix",&((PetscObject)B)->type_name)); 5739566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 5743bf14a46SMatthew Knepley 57566e17bc3SBarry Smith B->trivialsymbolic = PETSC_TRUE; 5763bf14a46SMatthew Knepley B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJPASTIX; 5773bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 57858c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_PaStiX; 5799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_pastix)); 5802205254eSKarl Rupp 581d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 5823bf14a46SMatthew Knepley 58300c67f3bSHong Zhang /* set solvertype */ 5849566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 5859566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX,&B->solvertype)); 58600c67f3bSHong Zhang 5879566063dSJacob Faibussowitsch PetscCall(PetscNewLog(B,&pastix)); 5882205254eSKarl Rupp 5893bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 5900298fd71SBarry Smith pastix->scat_rhs = NULL; 5910298fd71SBarry Smith pastix->scat_sol = NULL; 59258c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_External; 5933bf14a46SMatthew Knepley B->ops->destroy = MatDestroy_Pastix; 59458c95f1bSBarry Smith B->data = (void*)pastix; 5953bf14a46SMatthew Knepley 5963bf14a46SMatthew Knepley *F = B; 5973bf14a46SMatthew Knepley PetscFunctionReturn(0); 5983bf14a46SMatthew Knepley } 5993bf14a46SMatthew Knepley 600cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_seqsbaij_pastix(Mat A,MatFactorType ftype,Mat *F) 6013bf14a46SMatthew Knepley { 6023bf14a46SMatthew Knepley Mat B; 6033bf14a46SMatthew Knepley Mat_Pastix *pastix; 6043bf14a46SMatthew Knepley 6053bf14a46SMatthew Knepley PetscFunctionBegin; 6065f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_CHOLESKY,PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with PaStiX LU, use AIJ matrix"); 6073bf14a46SMatthew Knepley /* Create the factorization matrix */ 6089566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&B)); 6099566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N)); 6109566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix",&((PetscObject)B)->type_name)); 6119566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 6123bf14a46SMatthew Knepley 61366e17bc3SBarry Smith B->trivialsymbolic = PETSC_TRUE; 6143bf14a46SMatthew Knepley B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJPASTIX; 6153bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 61658c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_PaStiX; 6179566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_pastix)); 6182205254eSKarl Rupp 619d5f3da31SBarry Smith B->factortype = MAT_FACTOR_CHOLESKY; 6203bf14a46SMatthew Knepley 62100c67f3bSHong Zhang /* set solvertype */ 6229566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 6239566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX,&B->solvertype)); 62400c67f3bSHong Zhang 6259566063dSJacob Faibussowitsch PetscCall(PetscNewLog(B,&pastix)); 6262205254eSKarl Rupp 6273bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 6280298fd71SBarry Smith pastix->scat_rhs = NULL; 6290298fd71SBarry Smith pastix->scat_sol = NULL; 63058c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_External; 6313bf14a46SMatthew Knepley B->ops->destroy = MatDestroy_Pastix; 63258c95f1bSBarry Smith B->data = (void*)pastix; 6333bf14a46SMatthew Knepley *F = B; 6343bf14a46SMatthew Knepley PetscFunctionReturn(0); 6353bf14a46SMatthew Knepley } 6363bf14a46SMatthew Knepley 637cc2e6a90SBarry Smith static PetscErrorCode MatGetFactor_mpisbaij_pastix(Mat A,MatFactorType ftype,Mat *F) 6383bf14a46SMatthew Knepley { 6393bf14a46SMatthew Knepley Mat B; 6403bf14a46SMatthew Knepley Mat_Pastix *pastix; 6413bf14a46SMatthew Knepley 6423bf14a46SMatthew Knepley PetscFunctionBegin; 6435f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_CHOLESKY,PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use PETSc SBAIJ matrices with PaStiX LU, use AIJ matrix"); 64441c8de11SBarry Smith 6453bf14a46SMatthew Knepley /* Create the factorization matrix */ 6469566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&B)); 6479566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N)); 6489566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix",&((PetscObject)B)->type_name)); 6499566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 6503bf14a46SMatthew Knepley 6513bf14a46SMatthew Knepley B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJPASTIX; 6523bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 65358c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_PaStiX; 65458c95f1bSBarry Smith B->ops->destroy = MatDestroy_Pastix; 6559566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_pastix)); 6562205254eSKarl Rupp 657d5f3da31SBarry Smith B->factortype = MAT_FACTOR_CHOLESKY; 6583bf14a46SMatthew Knepley 65900c67f3bSHong Zhang /* set solvertype */ 6609566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 6619566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX,&B->solvertype)); 66200c67f3bSHong Zhang 6639566063dSJacob Faibussowitsch PetscCall(PetscNewLog(B,&pastix)); 6642205254eSKarl Rupp 6653bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 6660298fd71SBarry Smith pastix->scat_rhs = NULL; 6670298fd71SBarry Smith pastix->scat_sol = NULL; 66858c95f1bSBarry Smith B->data = (void*)pastix; 6693bf14a46SMatthew Knepley 6703bf14a46SMatthew Knepley *F = B; 6713bf14a46SMatthew Knepley PetscFunctionReturn(0); 6723bf14a46SMatthew Knepley } 673f7a08781SBarry Smith 6743ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_Pastix(void) 67542c9c57cSBarry Smith { 67642c9c57cSBarry Smith PetscFunctionBegin; 6779566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX,MATMPIAIJ, MAT_FACTOR_LU,MatGetFactor_mpiaij_pastix)); 6789566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX,MATSEQAIJ, MAT_FACTOR_LU,MatGetFactor_seqaij_pastix)); 6799566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX,MATMPISBAIJ, MAT_FACTOR_CHOLESKY,MatGetFactor_mpisbaij_pastix)); 6809566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX,MATSEQSBAIJ, MAT_FACTOR_CHOLESKY,MatGetFactor_seqsbaij_pastix)); 68142c9c57cSBarry Smith PetscFunctionReturn(0); 68242c9c57cSBarry Smith } 683