13bf14a46SMatthew Knepley /* 23bf14a46SMatthew Knepley Provides an interface to the PaStiX sparse solver 33bf14a46SMatthew Knepley */ 4c6db04a5SJed Brown #include <../src/mat/impls/aij/seq/aij.h> 5c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> 6c6db04a5SJed Brown #include <../src/mat/impls/sbaij/seq/sbaij.h> 7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> 83bf14a46SMatthew Knepley 9dbbbd53dSSatish Balay #if defined(PETSC_USE_COMPLEX) 105ec454cfSSatish Balay #define _H_COMPLEX 115ec454cfSSatish Balay #endif 125ec454cfSSatish Balay 133bf14a46SMatthew Knepley EXTERN_C_BEGIN 14c6db04a5SJed Brown #include <pastix.h> 153bf14a46SMatthew Knepley EXTERN_C_END 163bf14a46SMatthew Knepley 17519f805aSKarl Rupp #if defined(PETSC_USE_COMPLEX) 18519f805aSKarl Rupp #if defined(PETSC_USE_REAL_SINGLE) 195ec454cfSSatish Balay #define PASTIX_CALL c_pastix 205ec454cfSSatish Balay #else 215ec454cfSSatish Balay #define PASTIX_CALL z_pastix 225ec454cfSSatish Balay #endif 23d41469e0Sxavier lacoste 24d41469e0Sxavier lacoste #else /* PETSC_USE_COMPLEX */ 25d41469e0Sxavier lacoste 26519f805aSKarl Rupp #if defined(PETSC_USE_REAL_SINGLE) 275ec454cfSSatish Balay #define PASTIX_CALL s_pastix 285ec454cfSSatish Balay #else 295ec454cfSSatish Balay #define PASTIX_CALL d_pastix 305ec454cfSSatish Balay #endif 31d41469e0Sxavier lacoste 32d41469e0Sxavier lacoste #endif /* PETSC_USE_COMPLEX */ 33d41469e0Sxavier lacoste 34dbbbd53dSSatish Balay typedef PetscScalar PastixScalar; 35dbbbd53dSSatish Balay 363bf14a46SMatthew Knepley typedef struct Mat_Pastix_ { 373bf14a46SMatthew Knepley pastix_data_t *pastix_data; /* Pastix data storage structure */ 383bf14a46SMatthew Knepley MatStructure matstruc; 393bf14a46SMatthew Knepley PetscInt n; /* Number of columns in the matrix */ 403bf14a46SMatthew Knepley PetscInt *colptr; /* Index of first element of each column in row and val */ 413bf14a46SMatthew Knepley PetscInt *row; /* Row of each element of the matrix */ 423bf14a46SMatthew Knepley PetscScalar *val; /* Value of each element of the matrix */ 433bf14a46SMatthew Knepley PetscInt *perm; /* Permutation tabular */ 443bf14a46SMatthew Knepley PetscInt *invp; /* Reverse permutation tabular */ 453bf14a46SMatthew Knepley PetscScalar *rhs; /* Rhight-hand-side member */ 463bf14a46SMatthew Knepley PetscInt rhsnbr; /* Rhight-hand-side number (must be 1) */ 47baed9decSBarry Smith PetscInt iparm[IPARM_SIZE]; /* Integer parameters */ 48baed9decSBarry Smith double dparm[DPARM_SIZE]; /* Floating point parameters */ 493bf14a46SMatthew Knepley MPI_Comm pastix_comm; /* PaStiX MPI communicator */ 503bf14a46SMatthew Knepley PetscMPIInt commRank; /* MPI rank */ 513bf14a46SMatthew Knepley PetscMPIInt commSize; /* MPI communicator size */ 52ace3abfcSBarry Smith PetscBool CleanUpPastix; /* Boolean indicating if we call PaStiX clean step */ 533bf14a46SMatthew Knepley VecScatter scat_rhs; 543bf14a46SMatthew Knepley VecScatter scat_sol; 55f31ce8a6SBarry Smith Vec b_seq; 563bf14a46SMatthew Knepley } Mat_Pastix; 573bf14a46SMatthew Knepley 5809573ac7SBarry Smith extern PetscErrorCode MatDuplicate_Pastix(Mat, MatDuplicateOption, Mat *); 593bf14a46SMatthew Knepley 603bf14a46SMatthew Knepley /* 613bf14a46SMatthew Knepley convert Petsc seqaij matrix to CSC: colptr[n], row[nz], val[nz] 623bf14a46SMatthew Knepley 633bf14a46SMatthew Knepley input: 643bf14a46SMatthew Knepley A - matrix in seqaij or mpisbaij (bs=1) format 653bf14a46SMatthew Knepley valOnly - FALSE: spaces are allocated and values are set for the CSC 663bf14a46SMatthew Knepley TRUE: Only fill values 673bf14a46SMatthew Knepley output: 683bf14a46SMatthew Knepley n - Size of the matrix 693bf14a46SMatthew Knepley colptr - Index of first element of each column in row and val 703bf14a46SMatthew Knepley row - Row of each element of the matrix 713bf14a46SMatthew Knepley values - Value of each element of the matrix 723bf14a46SMatthew Knepley */ 73d71ae5a4SJacob Faibussowitsch PetscErrorCode MatConvertToCSC(Mat A, PetscBool valOnly, PetscInt *n, PetscInt **colptr, PetscInt **row, PetscScalar **values) 74d71ae5a4SJacob Faibussowitsch { 753bf14a46SMatthew Knepley Mat_SeqAIJ *aa = (Mat_SeqAIJ *)A->data; 763bf14a46SMatthew Knepley PetscInt *rowptr = aa->i; 773bf14a46SMatthew Knepley PetscInt *col = aa->j; 783bf14a46SMatthew Knepley PetscScalar *rvalues = aa->a; 793bf14a46SMatthew Knepley PetscInt m = A->rmap->N; 80745c78f7SBarry Smith PetscInt nnz; 813bf14a46SMatthew Knepley PetscInt i, j, k; 823bf14a46SMatthew Knepley PetscInt base = 1; 833bf14a46SMatthew Knepley PetscInt idx; 843bf14a46SMatthew Knepley PetscInt colidx; 853bf14a46SMatthew Knepley PetscInt *colcount; 86ace3abfcSBarry Smith PetscBool isSBAIJ; 87ace3abfcSBarry Smith PetscBool isSeqSBAIJ; 88ace3abfcSBarry Smith PetscBool isMpiSBAIJ; 89ace3abfcSBarry Smith PetscBool isSym; 903bf14a46SMatthew Knepley 913bf14a46SMatthew Knepley PetscFunctionBegin; 929566063dSJacob Faibussowitsch PetscCall(MatIsSymmetric(A, 0.0, &isSym)); 939566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSBAIJ, &isSBAIJ)); 949566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQSBAIJ, &isSeqSBAIJ)); 959566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPISBAIJ, &isMpiSBAIJ)); 963bf14a46SMatthew Knepley 97745c78f7SBarry Smith *n = A->cmap->N; 98745c78f7SBarry Smith 99745c78f7SBarry Smith /* PaStiX only needs triangular matrix if matrix is symmetric 100745c78f7SBarry Smith */ 1012205254eSKarl Rupp if (isSym && !(isSBAIJ || isSeqSBAIJ || isMpiSBAIJ)) nnz = (aa->nz - *n) / 2 + *n; 1022205254eSKarl Rupp else nnz = aa->nz; 1033bf14a46SMatthew Knepley 1043bf14a46SMatthew Knepley if (!valOnly) { 1059566063dSJacob Faibussowitsch PetscCall(PetscMalloc1((*n) + 1, colptr)); 1069566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nnz, row)); 1079566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nnz, values)); 1083bf14a46SMatthew Knepley 10941c8de11SBarry Smith if (isSBAIJ || isSeqSBAIJ || isMpiSBAIJ) { 1109566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(*colptr, rowptr, (*n) + 1)); 1112205254eSKarl Rupp for (i = 0; i < *n + 1; i++) (*colptr)[i] += base; 1129566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(*row, col, nnz)); 1132205254eSKarl Rupp for (i = 0; i < nnz; i++) (*row)[i] += base; 1149566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(*values, rvalues, nnz)); 11541c8de11SBarry Smith } else { 1169566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(*n, &colcount)); 11741c8de11SBarry Smith 118f31ce8a6SBarry Smith for (i = 0; i < m; i++) colcount[i] = 0; 1193bf14a46SMatthew Knepley /* Fill-in colptr */ 120f31ce8a6SBarry Smith for (i = 0; i < m; i++) { 121f31ce8a6SBarry Smith for (j = rowptr[i]; j < rowptr[i + 1]; j++) { 122f31ce8a6SBarry Smith if (!isSym || col[j] <= i) colcount[col[j]]++; 123f31ce8a6SBarry Smith } 124f31ce8a6SBarry Smith } 125745c78f7SBarry Smith 1263bf14a46SMatthew Knepley (*colptr)[0] = base; 1273bf14a46SMatthew Knepley for (j = 0; j < *n; j++) { 1283bf14a46SMatthew Knepley (*colptr)[j + 1] = (*colptr)[j] + colcount[j]; 129745c78f7SBarry Smith /* in next loop we fill starting from (*colptr)[colidx] - base */ 1303bf14a46SMatthew Knepley colcount[j] = -base; 1313bf14a46SMatthew Knepley } 1323bf14a46SMatthew Knepley 1333bf14a46SMatthew Knepley /* Fill-in rows and values */ 1343bf14a46SMatthew Knepley for (i = 0; i < m; i++) { 1353bf14a46SMatthew Knepley for (j = rowptr[i]; j < rowptr[i + 1]; j++) { 13641c8de11SBarry Smith if (!isSym || col[j] <= i) { 1373bf14a46SMatthew Knepley colidx = col[j]; 1383bf14a46SMatthew Knepley idx = (*colptr)[colidx] + colcount[colidx]; 1393bf14a46SMatthew Knepley (*row)[idx] = i + base; 1403bf14a46SMatthew Knepley (*values)[idx] = rvalues[j]; 1413bf14a46SMatthew Knepley colcount[colidx]++; 1423bf14a46SMatthew Knepley } 1433bf14a46SMatthew Knepley } 1443bf14a46SMatthew Knepley } 1459566063dSJacob Faibussowitsch PetscCall(PetscFree(colcount)); 146745c78f7SBarry Smith } 14741c8de11SBarry Smith } else { 148745c78f7SBarry Smith /* Fill-in only values */ 1493bf14a46SMatthew Knepley for (i = 0; i < m; i++) { 1503bf14a46SMatthew Knepley for (j = rowptr[i]; j < rowptr[i + 1]; j++) { 1513bf14a46SMatthew Knepley colidx = col[j]; 1522205254eSKarl Rupp if ((isSBAIJ || isSeqSBAIJ || isMpiSBAIJ) || !isSym || col[j] <= i) { 153745c78f7SBarry Smith /* look for the value to fill */ 154f31ce8a6SBarry Smith for (k = (*colptr)[colidx] - base; k < (*colptr)[colidx + 1] - base; k++) { 155eb1f6c34SBarry Smith if (((*row)[k] - base) == i) { 1563bf14a46SMatthew Knepley (*values)[k] = rvalues[j]; 1573bf14a46SMatthew Knepley break; 1583bf14a46SMatthew Knepley } 1593bf14a46SMatthew Knepley } 160f31ce8a6SBarry Smith /* data structure of sparse matrix has changed */ 161aed4548fSBarry Smith PetscCheck(k != (*colptr)[colidx + 1] - base, PETSC_COMM_SELF, PETSC_ERR_PLIB, "overflow on k %" PetscInt_FMT, k); 1623bf14a46SMatthew Knepley } 1633bf14a46SMatthew Knepley } 1643bf14a46SMatthew Knepley } 165745c78f7SBarry Smith } 1663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1673bf14a46SMatthew Knepley } 1683bf14a46SMatthew Knepley 1693bf14a46SMatthew Knepley /* 1703bf14a46SMatthew Knepley Call clean step of PaStiX if lu->CleanUpPastix == true. 1713bf14a46SMatthew Knepley Free the CSC matrix. 1723bf14a46SMatthew Knepley */ 173d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDestroy_Pastix(Mat A) 174d71ae5a4SJacob Faibussowitsch { 17558c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)A->data; 176745c78f7SBarry Smith 1773bf14a46SMatthew Knepley PetscFunctionBegin; 17858c95f1bSBarry Smith if (lu->CleanUpPastix) { 1793bf14a46SMatthew Knepley /* Terminate instance, deallocate memories */ 1809566063dSJacob Faibussowitsch PetscCall(VecScatterDestroy(&lu->scat_rhs)); 1819566063dSJacob Faibussowitsch PetscCall(VecDestroy(&lu->b_seq)); 1829566063dSJacob Faibussowitsch PetscCall(VecScatterDestroy(&lu->scat_sol)); 1833bf14a46SMatthew Knepley 1843bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_CLEAN; 1853bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_CLEAN; 1863bf14a46SMatthew Knepley 1879371c9d4SSatish Balay PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 18808401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in destroy: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 1899566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->colptr)); 1909566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->row)); 1919566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->val)); 1929566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->perm)); 1939566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->invp)); 1949566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_free(&(lu->pastix_comm))); 1953bf14a46SMatthew Knepley } 1962e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatFactorGetSolverType_C", NULL)); 1979566063dSJacob Faibussowitsch PetscCall(PetscFree(A->data)); 1983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1993bf14a46SMatthew Knepley } 2003bf14a46SMatthew Knepley 2013bf14a46SMatthew Knepley /* 2023bf14a46SMatthew Knepley Gather right-hand-side. 2033bf14a46SMatthew Knepley Call for Solve step. 2043bf14a46SMatthew Knepley Scatter solution. 2053bf14a46SMatthew Knepley */ 206d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSolve_PaStiX(Mat A, Vec b, Vec x) 207d71ae5a4SJacob Faibussowitsch { 20858c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)A->data; 2093bf14a46SMatthew Knepley PetscScalar *array; 2103bf14a46SMatthew Knepley Vec x_seq; 2113bf14a46SMatthew Knepley 2123bf14a46SMatthew Knepley PetscFunctionBegin; 2133bf14a46SMatthew Knepley lu->rhsnbr = 1; 2143bf14a46SMatthew Knepley x_seq = lu->b_seq; 2153bf14a46SMatthew Knepley if (lu->commSize > 1) { 21641ffd417SStefano Zampini /* PaStiX only supports centralized rhs. Scatter b into a sequential rhs vector */ 2179566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(lu->scat_rhs, b, x_seq, INSERT_VALUES, SCATTER_FORWARD)); 2189566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(lu->scat_rhs, b, x_seq, INSERT_VALUES, SCATTER_FORWARD)); 2199566063dSJacob Faibussowitsch PetscCall(VecGetArray(x_seq, &array)); 22041c8de11SBarry Smith } else { /* size == 1 */ 2219566063dSJacob Faibussowitsch PetscCall(VecCopy(b, x)); 2229566063dSJacob Faibussowitsch PetscCall(VecGetArray(x, &array)); 2233bf14a46SMatthew Knepley } 2243bf14a46SMatthew Knepley lu->rhs = array; 2253bf14a46SMatthew Knepley if (lu->commSize == 1) { 2269566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x, &array)); 2273bf14a46SMatthew Knepley } else { 2289566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x_seq, &array)); 2293bf14a46SMatthew Knepley } 2303bf14a46SMatthew Knepley 2313bf14a46SMatthew Knepley /* solve phase */ 2323bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_SOLVE; 2333bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_REFINE; 234745c78f7SBarry Smith lu->iparm[IPARM_RHS_MAKING] = API_RHS_B; 2353bf14a46SMatthew Knepley 2369371c9d4SSatish Balay PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 23708401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in solve phase: lu->iparm[IPARM_ERROR_NUMBER] = %" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 2383bf14a46SMatthew Knepley 2393bf14a46SMatthew Knepley if (lu->commSize == 1) { 2409566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x, &(lu->rhs))); 2413bf14a46SMatthew Knepley } else { 2429566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x_seq, &(lu->rhs))); 2433bf14a46SMatthew Knepley } 2443bf14a46SMatthew Knepley 2453bf14a46SMatthew Knepley if (lu->commSize > 1) { /* convert PaStiX centralized solution to petsc mpi x */ 2469566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(lu->scat_sol, x_seq, x, INSERT_VALUES, SCATTER_FORWARD)); 2479566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(lu->scat_sol, x_seq, x, INSERT_VALUES, SCATTER_FORWARD)); 2483bf14a46SMatthew Knepley } 2493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2503bf14a46SMatthew Knepley } 2513bf14a46SMatthew Knepley 2523bf14a46SMatthew Knepley /* 2533bf14a46SMatthew Knepley Numeric factorisation using PaStiX solver. 2543bf14a46SMatthew Knepley 2553bf14a46SMatthew Knepley */ 256d71ae5a4SJacob Faibussowitsch PetscErrorCode MatFactorNumeric_PaStiX(Mat F, Mat A, const MatFactorInfo *info) 257d71ae5a4SJacob Faibussowitsch { 25858c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)(F)->data; 25941c8de11SBarry Smith Mat *tseq; 260b5e56a35SBarry Smith PetscInt icntl; 261b5e56a35SBarry Smith PetscInt M = A->rmap->N; 262ace3abfcSBarry Smith PetscBool valOnly, flg, isSym; 2633bf14a46SMatthew Knepley IS is_iden; 2643bf14a46SMatthew Knepley Vec b; 2653bf14a46SMatthew Knepley IS isrow; 26651a30905SBarry Smith PetscBool isSeqAIJ, isSeqSBAIJ, isMPIAIJ; 2673bf14a46SMatthew Knepley 2683bf14a46SMatthew Knepley PetscFunctionBegin; 2699566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQAIJ, &isSeqAIJ)); 2709566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIAIJ, &isMPIAIJ)); 2719566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQSBAIJ, &isSeqSBAIJ)); 2723bf14a46SMatthew Knepley if (lu->matstruc == DIFFERENT_NONZERO_PATTERN) { 2733bf14a46SMatthew Knepley (F)->ops->solve = MatSolve_PaStiX; 2743bf14a46SMatthew Knepley 2753bf14a46SMatthew Knepley /* Initialize a PASTIX instance */ 2769566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_dup(PetscObjectComm((PetscObject)A), &(lu->pastix_comm))); 2779566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(lu->pastix_comm, &lu->commRank)); 2789566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(lu->pastix_comm, &lu->commSize)); 2793bf14a46SMatthew Knepley 2803bf14a46SMatthew Knepley /* Set pastix options */ 2813bf14a46SMatthew Knepley lu->iparm[IPARM_MODIFY_PARAMETER] = API_NO; 2823bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_INIT; 2833bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_INIT; 2842205254eSKarl Rupp 2853bf14a46SMatthew Knepley lu->rhsnbr = 1; 2863bf14a46SMatthew Knepley 2873bf14a46SMatthew Knepley /* Call to set default pastix options */ 2889371c9d4SSatish Balay PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 28908401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in MatFactorNumeric: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 2903bf14a46SMatthew Knepley 29126cc229bSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)F), ((PetscObject)F)->prefix, "PaStiX Options", "Mat"); 2923bf14a46SMatthew Knepley icntl = -1; 29341c8de11SBarry Smith lu->iparm[IPARM_VERBOSE] = API_VERBOSE_NOT; 2949566063dSJacob Faibussowitsch PetscCall(PetscOptionsInt("-mat_pastix_verbose", "iparm[IPARM_VERBOSE] : level of printing (0 to 2)", "None", lu->iparm[IPARM_VERBOSE], &icntl, &flg)); 295ad540459SPierre Jolivet if ((flg && icntl >= 0) || PetscLogPrintInfo) lu->iparm[IPARM_VERBOSE] = icntl; 2963bf14a46SMatthew Knepley icntl = -1; 2979566063dSJacob Faibussowitsch PetscCall(PetscOptionsInt("-mat_pastix_threadnbr", "iparm[IPARM_THREAD_NBR] : Number of thread by MPI node", "None", lu->iparm[IPARM_THREAD_NBR], &icntl, &flg)); 298ad540459SPierre Jolivet if ((flg && icntl > 0)) lu->iparm[IPARM_THREAD_NBR] = icntl; 299d0609cedSBarry Smith PetscOptionsEnd(); 3003bf14a46SMatthew Knepley valOnly = PETSC_FALSE; 30141c8de11SBarry Smith } else { 3025d6241c8SBarry Smith if (isSeqAIJ || isMPIAIJ) { 3039566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->colptr)); 3049566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->row)); 3059566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->val)); 3065d6241c8SBarry Smith valOnly = PETSC_FALSE; 3075d6241c8SBarry Smith } else valOnly = PETSC_TRUE; 3083bf14a46SMatthew Knepley } 3093bf14a46SMatthew Knepley 3103bf14a46SMatthew Knepley lu->iparm[IPARM_MATRIX_VERIFICATION] = API_YES; 3113bf14a46SMatthew Knepley 3123bf14a46SMatthew Knepley /* convert mpi A to seq mat A */ 3139566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, M, 0, 1, &isrow)); 3149566063dSJacob Faibussowitsch PetscCall(MatCreateSubMatrices(A, 1, &isrow, &isrow, MAT_INITIAL_MATRIX, &tseq)); 3159566063dSJacob Faibussowitsch PetscCall(ISDestroy(&isrow)); 3163bf14a46SMatthew Knepley 3179566063dSJacob Faibussowitsch PetscCall(MatConvertToCSC(*tseq, valOnly, &lu->n, &lu->colptr, &lu->row, &lu->val)); 3189566063dSJacob Faibussowitsch PetscCall(MatIsSymmetric(*tseq, 0.0, &isSym)); 3199566063dSJacob Faibussowitsch PetscCall(MatDestroyMatrices(1, &tseq)); 32041c8de11SBarry Smith 3215d6241c8SBarry Smith if (!lu->perm) { 3229566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(lu->n, &(lu->perm))); 3239566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(lu->n, &(lu->invp))); 3245d6241c8SBarry Smith } 3253bf14a46SMatthew Knepley 3263bf14a46SMatthew Knepley if (isSym) { 327745c78f7SBarry Smith /* On symmetric matrix, LLT */ 3283bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_YES; 32941c8de11SBarry Smith lu->iparm[IPARM_FACTORIZATION] = API_FACT_LDLT; 330f31ce8a6SBarry Smith } else { 331745c78f7SBarry Smith /* On unsymmetric matrix, LU */ 3323bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_NO; 3333bf14a46SMatthew Knepley lu->iparm[IPARM_FACTORIZATION] = API_FACT_LU; 3343bf14a46SMatthew Knepley } 3353bf14a46SMatthew Knepley 3363bf14a46SMatthew Knepley if (lu->matstruc == DIFFERENT_NONZERO_PATTERN) { 33758c95f1bSBarry Smith if (!(isSeqAIJ || isSeqSBAIJ) && !lu->b_seq) { 3383bf14a46SMatthew Knepley /* PaStiX only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 3399566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF, A->cmap->N, &lu->b_seq)); 3409566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, A->cmap->N, 0, 1, &is_iden)); 3419566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A, NULL, &b)); 3429566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(b, is_iden, lu->b_seq, is_iden, &lu->scat_rhs)); 3439566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(lu->b_seq, is_iden, b, is_iden, &lu->scat_sol)); 3449566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is_iden)); 3459566063dSJacob Faibussowitsch PetscCall(VecDestroy(&b)); 3463bf14a46SMatthew Knepley } 3473bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_ORDERING; 3483bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_NUMFACT; 3493bf14a46SMatthew Knepley 3509371c9d4SSatish Balay PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 35108401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in analysis phase: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 35241c8de11SBarry Smith } else { 3533bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_NUMFACT; 3543bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_NUMFACT; 3559371c9d4SSatish Balay PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 35608401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in analysis phase: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 3573bf14a46SMatthew Knepley } 3583bf14a46SMatthew Knepley 3593bf14a46SMatthew Knepley (F)->assembled = PETSC_TRUE; 3603bf14a46SMatthew Knepley lu->matstruc = SAME_NONZERO_PATTERN; 3613bf14a46SMatthew Knepley lu->CleanUpPastix = PETSC_TRUE; 3623ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3633bf14a46SMatthew Knepley } 3643bf14a46SMatthew Knepley 3653bf14a46SMatthew Knepley /* Note the Petsc r and c permutations are ignored */ 366d71ae5a4SJacob Faibussowitsch PetscErrorCode MatLUFactorSymbolic_AIJPASTIX(Mat F, Mat A, IS r, IS c, const MatFactorInfo *info) 367d71ae5a4SJacob Faibussowitsch { 36858c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)F->data; 3693bf14a46SMatthew Knepley 3703bf14a46SMatthew Knepley PetscFunctionBegin; 3713bf14a46SMatthew Knepley lu->iparm[IPARM_FACTORIZATION] = API_FACT_LU; 3723bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_YES; 3733bf14a46SMatthew Knepley lu->matstruc = DIFFERENT_NONZERO_PATTERN; 3743bf14a46SMatthew Knepley F->ops->lufactornumeric = MatFactorNumeric_PaStiX; 3753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3763bf14a46SMatthew Knepley } 3773bf14a46SMatthew Knepley 378d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCholeskyFactorSymbolic_SBAIJPASTIX(Mat F, Mat A, IS r, const MatFactorInfo *info) 379d71ae5a4SJacob Faibussowitsch { 38058c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)(F)->data; 3813bf14a46SMatthew Knepley 3823bf14a46SMatthew Knepley PetscFunctionBegin; 3833bf14a46SMatthew Knepley lu->iparm[IPARM_FACTORIZATION] = API_FACT_LLT; 3843bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_NO; 3853bf14a46SMatthew Knepley lu->matstruc = DIFFERENT_NONZERO_PATTERN; 3863bf14a46SMatthew Knepley (F)->ops->choleskyfactornumeric = MatFactorNumeric_PaStiX; 3873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3883bf14a46SMatthew Knepley } 3893bf14a46SMatthew Knepley 390d71ae5a4SJacob Faibussowitsch PetscErrorCode MatView_PaStiX(Mat A, PetscViewer viewer) 391d71ae5a4SJacob Faibussowitsch { 392ace3abfcSBarry Smith PetscBool iascii; 3933bf14a46SMatthew Knepley PetscViewerFormat format; 3943bf14a46SMatthew Knepley 3953bf14a46SMatthew Knepley PetscFunctionBegin; 3969566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 3973bf14a46SMatthew Knepley if (iascii) { 3989566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 3993bf14a46SMatthew Knepley if (format == PETSC_VIEWER_ASCII_INFO) { 40058c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)A->data; 401b5e56a35SBarry Smith 4029566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "PaStiX run parameters:\n")); 4039566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, " Matrix type : %s \n", ((lu->iparm[IPARM_SYM] == API_SYM_YES) ? "Symmetric" : "Unsymmetric"))); 4049566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, " Level of printing (0,1,2): %" PetscInt_FMT " \n", lu->iparm[IPARM_VERBOSE])); 4059566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, " Number of refinements iterations : %" PetscInt_FMT " \n", lu->iparm[IPARM_NBITER])); 4069566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF, " Error : %g \n", lu->dparm[DPARM_RELATIVE_ERROR])); 4073bf14a46SMatthew Knepley } 4083bf14a46SMatthew Knepley } 4093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4103bf14a46SMatthew Knepley } 4113bf14a46SMatthew Knepley 4123bf14a46SMatthew Knepley /*MC 4132692d6eeSBarry Smith MATSOLVERPASTIX - A solver package providing direct solvers (LU) for distributed 4143bf14a46SMatthew Knepley and sequential matrices via the external package PaStiX. 4153bf14a46SMatthew Knepley 416*2ef1f0ffSBarry Smith Use `./configure` `--download-pastix` `--download-ptscotch` to have PETSc installed with PasTiX 417c2b89b5dSBarry Smith 418*2ef1f0ffSBarry Smith Use `-pc_type lu` `-pc_factor_mat_solver_type pastix` to use this direct solver 4193bf14a46SMatthew Knepley 4203bf14a46SMatthew Knepley Options Database Keys: 421*2ef1f0ffSBarry Smith + -mat_pastix_verbose <0,1,2> - print level of information messages from PaStiX 422*2ef1f0ffSBarry Smith - -mat_pastix_threadnbr <integer> - Set the number of threads for each MPI process 4233bf14a46SMatthew Knepley 42495452b02SPatrick Sanan Notes: 42595452b02SPatrick Sanan This only works for matrices with symmetric nonzero structure, if you pass it a matrix with 426*2ef1f0ffSBarry Smith nonsymmetric structure PasTiX, and hence, PETSc return with an error. 427baed9decSBarry Smith 4283bf14a46SMatthew Knepley Level: beginner 4293bf14a46SMatthew Knepley 430*2ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `PCFactorSetMatSolverType()`, `MatSolverType`, `MatGetFactor()` 4313bf14a46SMatthew Knepley M*/ 4323bf14a46SMatthew Knepley 433d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetInfo_PaStiX(Mat A, MatInfoType flag, MatInfo *info) 434d71ae5a4SJacob Faibussowitsch { 43558c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)A->data; 4363bf14a46SMatthew Knepley 4373bf14a46SMatthew Knepley PetscFunctionBegin; 4383bf14a46SMatthew Knepley info->block_size = 1.0; 4393bf14a46SMatthew Knepley info->nz_allocated = lu->iparm[IPARM_NNZEROS]; 4403bf14a46SMatthew Knepley info->nz_used = lu->iparm[IPARM_NNZEROS]; 4413bf14a46SMatthew Knepley info->nz_unneeded = 0.0; 4423bf14a46SMatthew Knepley info->assemblies = 0.0; 4433bf14a46SMatthew Knepley info->mallocs = 0.0; 4443bf14a46SMatthew Knepley info->memory = 0.0; 4453bf14a46SMatthew Knepley info->fill_ratio_given = 0; 4463bf14a46SMatthew Knepley info->fill_ratio_needed = 0; 4473bf14a46SMatthew Knepley info->factor_mallocs = 0; 4483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4493bf14a46SMatthew Knepley } 4503bf14a46SMatthew Knepley 451d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatFactorGetSolverType_pastix(Mat A, MatSolverType *type) 452d71ae5a4SJacob Faibussowitsch { 4533bf14a46SMatthew Knepley PetscFunctionBegin; 4542692d6eeSBarry Smith *type = MATSOLVERPASTIX; 4553ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4563bf14a46SMatthew Knepley } 4573bf14a46SMatthew Knepley 4583bf14a46SMatthew Knepley /* 4593bf14a46SMatthew Knepley The seq and mpi versions of this function are the same 4603bf14a46SMatthew Knepley */ 461d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetFactor_seqaij_pastix(Mat A, MatFactorType ftype, Mat *F) 462d71ae5a4SJacob Faibussowitsch { 4633bf14a46SMatthew Knepley Mat B; 4643bf14a46SMatthew Knepley Mat_Pastix *pastix; 4653bf14a46SMatthew Knepley 4663bf14a46SMatthew Knepley PetscFunctionBegin; 4675f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_LU, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc AIJ matrices with PaStiX Cholesky, use SBAIJ matrix"); 4683bf14a46SMatthew Knepley /* Create the factorization matrix */ 4699566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 4709566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 4719566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name)); 4729566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 4733bf14a46SMatthew Knepley 47466e17bc3SBarry Smith B->trivialsymbolic = PETSC_TRUE; 4753bf14a46SMatthew Knepley B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJPASTIX; 4763bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 4773bf14a46SMatthew Knepley B->ops->getinfo = MatGetInfo_PaStiX; 4782205254eSKarl Rupp 4799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix)); 4802205254eSKarl Rupp 481d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 4823bf14a46SMatthew Knepley 48300c67f3bSHong Zhang /* set solvertype */ 4849566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 4859566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype)); 48600c67f3bSHong Zhang 4874dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&pastix)); 4882205254eSKarl Rupp 4893bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 4900298fd71SBarry Smith pastix->scat_rhs = NULL; 4910298fd71SBarry Smith pastix->scat_sol = NULL; 49258c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_External; 4933bf14a46SMatthew Knepley B->ops->destroy = MatDestroy_Pastix; 49458c95f1bSBarry Smith B->data = (void *)pastix; 4953bf14a46SMatthew Knepley 4963bf14a46SMatthew Knepley *F = B; 4973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4983bf14a46SMatthew Knepley } 4993bf14a46SMatthew Knepley 500d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetFactor_mpiaij_pastix(Mat A, MatFactorType ftype, Mat *F) 501d71ae5a4SJacob Faibussowitsch { 5023bf14a46SMatthew Knepley Mat B; 5033bf14a46SMatthew Knepley Mat_Pastix *pastix; 5043bf14a46SMatthew Knepley 5053bf14a46SMatthew Knepley PetscFunctionBegin; 5065f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_LU, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc AIJ matrices with PaStiX Cholesky, use SBAIJ matrix"); 5073bf14a46SMatthew Knepley /* Create the factorization matrix */ 5089566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 5099566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 5109566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name)); 5119566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 5123bf14a46SMatthew Knepley 51366e17bc3SBarry Smith B->trivialsymbolic = PETSC_TRUE; 5143bf14a46SMatthew Knepley B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJPASTIX; 5153bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 51658c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_PaStiX; 5179566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix)); 5182205254eSKarl Rupp 519d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 5203bf14a46SMatthew Knepley 52100c67f3bSHong Zhang /* set solvertype */ 5229566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 5239566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype)); 52400c67f3bSHong Zhang 5254dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&pastix)); 5262205254eSKarl Rupp 5273bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 5280298fd71SBarry Smith pastix->scat_rhs = NULL; 5290298fd71SBarry Smith pastix->scat_sol = NULL; 53058c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_External; 5313bf14a46SMatthew Knepley B->ops->destroy = MatDestroy_Pastix; 53258c95f1bSBarry Smith B->data = (void *)pastix; 5333bf14a46SMatthew Knepley 5343bf14a46SMatthew Knepley *F = B; 5353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5363bf14a46SMatthew Knepley } 5373bf14a46SMatthew Knepley 538d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetFactor_seqsbaij_pastix(Mat A, MatFactorType ftype, Mat *F) 539d71ae5a4SJacob Faibussowitsch { 5403bf14a46SMatthew Knepley Mat B; 5413bf14a46SMatthew Knepley Mat_Pastix *pastix; 5423bf14a46SMatthew Knepley 5433bf14a46SMatthew Knepley PetscFunctionBegin; 5445f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_CHOLESKY, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc SBAIJ matrices with PaStiX LU, use AIJ matrix"); 5453bf14a46SMatthew Knepley /* Create the factorization matrix */ 5469566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 5479566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 5489566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name)); 5499566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 5503bf14a46SMatthew Knepley 55166e17bc3SBarry Smith B->trivialsymbolic = PETSC_TRUE; 5523bf14a46SMatthew Knepley B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJPASTIX; 5533bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 55458c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_PaStiX; 5559566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix)); 5562205254eSKarl Rupp 557d5f3da31SBarry Smith B->factortype = MAT_FACTOR_CHOLESKY; 5583bf14a46SMatthew Knepley 55900c67f3bSHong Zhang /* set solvertype */ 5609566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 5619566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype)); 56200c67f3bSHong Zhang 5634dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&pastix)); 5642205254eSKarl Rupp 5653bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 5660298fd71SBarry Smith pastix->scat_rhs = NULL; 5670298fd71SBarry Smith pastix->scat_sol = NULL; 56858c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_External; 5693bf14a46SMatthew Knepley B->ops->destroy = MatDestroy_Pastix; 57058c95f1bSBarry Smith B->data = (void *)pastix; 5713bf14a46SMatthew Knepley *F = B; 5723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5733bf14a46SMatthew Knepley } 5743bf14a46SMatthew Knepley 575d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetFactor_mpisbaij_pastix(Mat A, MatFactorType ftype, Mat *F) 576d71ae5a4SJacob Faibussowitsch { 5773bf14a46SMatthew Knepley Mat B; 5783bf14a46SMatthew Knepley Mat_Pastix *pastix; 5793bf14a46SMatthew Knepley 5803bf14a46SMatthew Knepley PetscFunctionBegin; 5815f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_CHOLESKY, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc SBAIJ matrices with PaStiX LU, use AIJ matrix"); 58241c8de11SBarry Smith 5833bf14a46SMatthew Knepley /* Create the factorization matrix */ 5849566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 5859566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 5869566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name)); 5879566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 5883bf14a46SMatthew Knepley 5893bf14a46SMatthew Knepley B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJPASTIX; 5903bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 59158c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_PaStiX; 59258c95f1bSBarry Smith B->ops->destroy = MatDestroy_Pastix; 5939566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix)); 5942205254eSKarl Rupp 595d5f3da31SBarry Smith B->factortype = MAT_FACTOR_CHOLESKY; 5963bf14a46SMatthew Knepley 59700c67f3bSHong Zhang /* set solvertype */ 5989566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 5999566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype)); 60000c67f3bSHong Zhang 6014dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&pastix)); 6022205254eSKarl Rupp 6033bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 6040298fd71SBarry Smith pastix->scat_rhs = NULL; 6050298fd71SBarry Smith pastix->scat_sol = NULL; 60658c95f1bSBarry Smith B->data = (void *)pastix; 6073bf14a46SMatthew Knepley 6083bf14a46SMatthew Knepley *F = B; 6093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6103bf14a46SMatthew Knepley } 611f7a08781SBarry Smith 612d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_Pastix(void) 613d71ae5a4SJacob Faibussowitsch { 61442c9c57cSBarry Smith PetscFunctionBegin; 6159566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATMPIAIJ, MAT_FACTOR_LU, MatGetFactor_mpiaij_pastix)); 6169566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATSEQAIJ, MAT_FACTOR_LU, MatGetFactor_seqaij_pastix)); 6179566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATMPISBAIJ, MAT_FACTOR_CHOLESKY, MatGetFactor_mpisbaij_pastix)); 6189566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATSEQSBAIJ, MAT_FACTOR_CHOLESKY, MatGetFactor_seqsbaij_pastix)); 6193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 62042c9c57cSBarry Smith } 621