13bf14a46SMatthew Knepley /* 23bf14a46SMatthew Knepley Provides an interface to the PaStiX sparse solver 33bf14a46SMatthew Knepley */ 4c6db04a5SJed Brown #include <../src/mat/impls/aij/seq/aij.h> 5c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> 6c6db04a5SJed Brown #include <../src/mat/impls/sbaij/seq/sbaij.h> 7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> 83bf14a46SMatthew Knepley 9dbbbd53dSSatish Balay #if defined(PETSC_USE_COMPLEX) 105ec454cfSSatish Balay #define _H_COMPLEX 115ec454cfSSatish Balay #endif 125ec454cfSSatish Balay 133bf14a46SMatthew Knepley EXTERN_C_BEGIN 14c6db04a5SJed Brown #include <pastix.h> 153bf14a46SMatthew Knepley EXTERN_C_END 163bf14a46SMatthew Knepley 17519f805aSKarl Rupp #if defined(PETSC_USE_COMPLEX) 18519f805aSKarl Rupp #if defined(PETSC_USE_REAL_SINGLE) 195ec454cfSSatish Balay #define PASTIX_CALL c_pastix 205ec454cfSSatish Balay #else 215ec454cfSSatish Balay #define PASTIX_CALL z_pastix 225ec454cfSSatish Balay #endif 23d41469e0Sxavier lacoste 24d41469e0Sxavier lacoste #else /* PETSC_USE_COMPLEX */ 25d41469e0Sxavier lacoste 26519f805aSKarl Rupp #if defined(PETSC_USE_REAL_SINGLE) 275ec454cfSSatish Balay #define PASTIX_CALL s_pastix 285ec454cfSSatish Balay #else 295ec454cfSSatish Balay #define PASTIX_CALL d_pastix 305ec454cfSSatish Balay #endif 31d41469e0Sxavier lacoste 32d41469e0Sxavier lacoste #endif /* PETSC_USE_COMPLEX */ 33d41469e0Sxavier lacoste 34dbbbd53dSSatish Balay typedef PetscScalar PastixScalar; 35dbbbd53dSSatish Balay 363bf14a46SMatthew Knepley typedef struct Mat_Pastix_ { 373bf14a46SMatthew Knepley pastix_data_t *pastix_data; /* Pastix data storage structure */ 383bf14a46SMatthew Knepley MatStructure matstruc; 393bf14a46SMatthew Knepley PetscInt n; /* Number of columns in the matrix */ 403bf14a46SMatthew Knepley PetscInt *colptr; /* Index of first element of each column in row and val */ 413bf14a46SMatthew Knepley PetscInt *row; /* Row of each element of the matrix */ 423bf14a46SMatthew Knepley PetscScalar *val; /* Value of each element of the matrix */ 433bf14a46SMatthew Knepley PetscInt *perm; /* Permutation tabular */ 443bf14a46SMatthew Knepley PetscInt *invp; /* Reverse permutation tabular */ 453bf14a46SMatthew Knepley PetscScalar *rhs; /* Rhight-hand-side member */ 463bf14a46SMatthew Knepley PetscInt rhsnbr; /* Rhight-hand-side number (must be 1) */ 47baed9decSBarry Smith PetscInt iparm[IPARM_SIZE]; /* Integer parameters */ 48baed9decSBarry Smith double dparm[DPARM_SIZE]; /* Floating point parameters */ 493bf14a46SMatthew Knepley MPI_Comm pastix_comm; /* PaStiX MPI communicator */ 503bf14a46SMatthew Knepley PetscMPIInt commRank; /* MPI rank */ 513bf14a46SMatthew Knepley PetscMPIInt commSize; /* MPI communicator size */ 52ace3abfcSBarry Smith PetscBool CleanUpPastix; /* Boolean indicating if we call PaStiX clean step */ 533bf14a46SMatthew Knepley VecScatter scat_rhs; 543bf14a46SMatthew Knepley VecScatter scat_sol; 55f31ce8a6SBarry Smith Vec b_seq; 563bf14a46SMatthew Knepley } Mat_Pastix; 573bf14a46SMatthew Knepley 5809573ac7SBarry Smith extern PetscErrorCode MatDuplicate_Pastix(Mat, MatDuplicateOption, Mat *); 593bf14a46SMatthew Knepley 603bf14a46SMatthew Knepley /* 613bf14a46SMatthew Knepley convert Petsc seqaij matrix to CSC: colptr[n], row[nz], val[nz] 623bf14a46SMatthew Knepley 633bf14a46SMatthew Knepley input: 643bf14a46SMatthew Knepley A - matrix in seqaij or mpisbaij (bs=1) format 653bf14a46SMatthew Knepley valOnly - FALSE: spaces are allocated and values are set for the CSC 663bf14a46SMatthew Knepley TRUE: Only fill values 673bf14a46SMatthew Knepley output: 683bf14a46SMatthew Knepley n - Size of the matrix 693bf14a46SMatthew Knepley colptr - Index of first element of each column in row and val 703bf14a46SMatthew Knepley row - Row of each element of the matrix 713bf14a46SMatthew Knepley values - Value of each element of the matrix 723bf14a46SMatthew Knepley */ 73*9371c9d4SSatish Balay PetscErrorCode MatConvertToCSC(Mat A, PetscBool valOnly, PetscInt *n, PetscInt **colptr, PetscInt **row, PetscScalar **values) { 743bf14a46SMatthew Knepley Mat_SeqAIJ *aa = (Mat_SeqAIJ *)A->data; 753bf14a46SMatthew Knepley PetscInt *rowptr = aa->i; 763bf14a46SMatthew Knepley PetscInt *col = aa->j; 773bf14a46SMatthew Knepley PetscScalar *rvalues = aa->a; 783bf14a46SMatthew Knepley PetscInt m = A->rmap->N; 79745c78f7SBarry Smith PetscInt nnz; 803bf14a46SMatthew Knepley PetscInt i, j, k; 813bf14a46SMatthew Knepley PetscInt base = 1; 823bf14a46SMatthew Knepley PetscInt idx; 833bf14a46SMatthew Knepley PetscInt colidx; 843bf14a46SMatthew Knepley PetscInt *colcount; 85ace3abfcSBarry Smith PetscBool isSBAIJ; 86ace3abfcSBarry Smith PetscBool isSeqSBAIJ; 87ace3abfcSBarry Smith PetscBool isMpiSBAIJ; 88ace3abfcSBarry Smith PetscBool isSym; 893bf14a46SMatthew Knepley 903bf14a46SMatthew Knepley PetscFunctionBegin; 919566063dSJacob Faibussowitsch PetscCall(MatIsSymmetric(A, 0.0, &isSym)); 929566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSBAIJ, &isSBAIJ)); 939566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQSBAIJ, &isSeqSBAIJ)); 949566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPISBAIJ, &isMpiSBAIJ)); 953bf14a46SMatthew Knepley 96745c78f7SBarry Smith *n = A->cmap->N; 97745c78f7SBarry Smith 98745c78f7SBarry Smith /* PaStiX only needs triangular matrix if matrix is symmetric 99745c78f7SBarry Smith */ 1002205254eSKarl Rupp if (isSym && !(isSBAIJ || isSeqSBAIJ || isMpiSBAIJ)) nnz = (aa->nz - *n) / 2 + *n; 1012205254eSKarl Rupp else nnz = aa->nz; 1023bf14a46SMatthew Knepley 1033bf14a46SMatthew Knepley if (!valOnly) { 1049566063dSJacob Faibussowitsch PetscCall(PetscMalloc1((*n) + 1, colptr)); 1059566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nnz, row)); 1069566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nnz, values)); 1073bf14a46SMatthew Knepley 10841c8de11SBarry Smith if (isSBAIJ || isSeqSBAIJ || isMpiSBAIJ) { 1099566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(*colptr, rowptr, (*n) + 1)); 1102205254eSKarl Rupp for (i = 0; i < *n + 1; i++) (*colptr)[i] += base; 1119566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(*row, col, nnz)); 1122205254eSKarl Rupp for (i = 0; i < nnz; i++) (*row)[i] += base; 1139566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(*values, rvalues, nnz)); 11441c8de11SBarry Smith } else { 1159566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(*n, &colcount)); 11641c8de11SBarry Smith 117f31ce8a6SBarry Smith for (i = 0; i < m; i++) colcount[i] = 0; 1183bf14a46SMatthew Knepley /* Fill-in colptr */ 119f31ce8a6SBarry Smith for (i = 0; i < m; i++) { 120f31ce8a6SBarry Smith for (j = rowptr[i]; j < rowptr[i + 1]; j++) { 121f31ce8a6SBarry Smith if (!isSym || col[j] <= i) colcount[col[j]]++; 122f31ce8a6SBarry Smith } 123f31ce8a6SBarry Smith } 124745c78f7SBarry Smith 1253bf14a46SMatthew Knepley (*colptr)[0] = base; 1263bf14a46SMatthew Knepley for (j = 0; j < *n; j++) { 1273bf14a46SMatthew Knepley (*colptr)[j + 1] = (*colptr)[j] + colcount[j]; 128745c78f7SBarry Smith /* in next loop we fill starting from (*colptr)[colidx] - base */ 1293bf14a46SMatthew Knepley colcount[j] = -base; 1303bf14a46SMatthew Knepley } 1313bf14a46SMatthew Knepley 1323bf14a46SMatthew Knepley /* Fill-in rows and values */ 1333bf14a46SMatthew Knepley for (i = 0; i < m; i++) { 1343bf14a46SMatthew Knepley for (j = rowptr[i]; j < rowptr[i + 1]; j++) { 13541c8de11SBarry Smith if (!isSym || col[j] <= i) { 1363bf14a46SMatthew Knepley colidx = col[j]; 1373bf14a46SMatthew Knepley idx = (*colptr)[colidx] + colcount[colidx]; 1383bf14a46SMatthew Knepley (*row)[idx] = i + base; 1393bf14a46SMatthew Knepley (*values)[idx] = rvalues[j]; 1403bf14a46SMatthew Knepley colcount[colidx]++; 1413bf14a46SMatthew Knepley } 1423bf14a46SMatthew Knepley } 1433bf14a46SMatthew Knepley } 1449566063dSJacob Faibussowitsch PetscCall(PetscFree(colcount)); 145745c78f7SBarry Smith } 14641c8de11SBarry Smith } else { 147745c78f7SBarry Smith /* Fill-in only values */ 1483bf14a46SMatthew Knepley for (i = 0; i < m; i++) { 1493bf14a46SMatthew Knepley for (j = rowptr[i]; j < rowptr[i + 1]; j++) { 1503bf14a46SMatthew Knepley colidx = col[j]; 1512205254eSKarl Rupp if ((isSBAIJ || isSeqSBAIJ || isMpiSBAIJ) || !isSym || col[j] <= i) { 152745c78f7SBarry Smith /* look for the value to fill */ 153f31ce8a6SBarry Smith for (k = (*colptr)[colidx] - base; k < (*colptr)[colidx + 1] - base; k++) { 154eb1f6c34SBarry Smith if (((*row)[k] - base) == i) { 1553bf14a46SMatthew Knepley (*values)[k] = rvalues[j]; 1563bf14a46SMatthew Knepley break; 1573bf14a46SMatthew Knepley } 1583bf14a46SMatthew Knepley } 159f31ce8a6SBarry Smith /* data structure of sparse matrix has changed */ 160aed4548fSBarry Smith PetscCheck(k != (*colptr)[colidx + 1] - base, PETSC_COMM_SELF, PETSC_ERR_PLIB, "overflow on k %" PetscInt_FMT, k); 1613bf14a46SMatthew Knepley } 1623bf14a46SMatthew Knepley } 1633bf14a46SMatthew Knepley } 164745c78f7SBarry Smith } 1653bf14a46SMatthew Knepley PetscFunctionReturn(0); 1663bf14a46SMatthew Knepley } 1673bf14a46SMatthew Knepley 1683bf14a46SMatthew Knepley /* 1693bf14a46SMatthew Knepley Call clean step of PaStiX if lu->CleanUpPastix == true. 1703bf14a46SMatthew Knepley Free the CSC matrix. 1713bf14a46SMatthew Knepley */ 172*9371c9d4SSatish Balay PetscErrorCode MatDestroy_Pastix(Mat A) { 17358c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)A->data; 174745c78f7SBarry Smith 1753bf14a46SMatthew Knepley PetscFunctionBegin; 17658c95f1bSBarry Smith if (lu->CleanUpPastix) { 1773bf14a46SMatthew Knepley /* Terminate instance, deallocate memories */ 1789566063dSJacob Faibussowitsch PetscCall(VecScatterDestroy(&lu->scat_rhs)); 1799566063dSJacob Faibussowitsch PetscCall(VecDestroy(&lu->b_seq)); 1809566063dSJacob Faibussowitsch PetscCall(VecScatterDestroy(&lu->scat_sol)); 1813bf14a46SMatthew Knepley 1823bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_CLEAN; 1833bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_CLEAN; 1843bf14a46SMatthew Knepley 185*9371c9d4SSatish Balay PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 18608401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in destroy: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 1879566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->colptr)); 1889566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->row)); 1899566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->val)); 1909566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->perm)); 1919566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->invp)); 1929566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_free(&(lu->pastix_comm))); 1933bf14a46SMatthew Knepley } 1942e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatFactorGetSolverType_C", NULL)); 1959566063dSJacob Faibussowitsch PetscCall(PetscFree(A->data)); 1963bf14a46SMatthew Knepley PetscFunctionReturn(0); 1973bf14a46SMatthew Knepley } 1983bf14a46SMatthew Knepley 1993bf14a46SMatthew Knepley /* 2003bf14a46SMatthew Knepley Gather right-hand-side. 2013bf14a46SMatthew Knepley Call for Solve step. 2023bf14a46SMatthew Knepley Scatter solution. 2033bf14a46SMatthew Knepley */ 204*9371c9d4SSatish Balay PetscErrorCode MatSolve_PaStiX(Mat A, Vec b, Vec x) { 20558c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)A->data; 2063bf14a46SMatthew Knepley PetscScalar *array; 2073bf14a46SMatthew Knepley Vec x_seq; 2083bf14a46SMatthew Knepley 2093bf14a46SMatthew Knepley PetscFunctionBegin; 2103bf14a46SMatthew Knepley lu->rhsnbr = 1; 2113bf14a46SMatthew Knepley x_seq = lu->b_seq; 2123bf14a46SMatthew Knepley if (lu->commSize > 1) { 21341ffd417SStefano Zampini /* PaStiX only supports centralized rhs. Scatter b into a sequential rhs vector */ 2149566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(lu->scat_rhs, b, x_seq, INSERT_VALUES, SCATTER_FORWARD)); 2159566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(lu->scat_rhs, b, x_seq, INSERT_VALUES, SCATTER_FORWARD)); 2169566063dSJacob Faibussowitsch PetscCall(VecGetArray(x_seq, &array)); 21741c8de11SBarry Smith } else { /* size == 1 */ 2189566063dSJacob Faibussowitsch PetscCall(VecCopy(b, x)); 2199566063dSJacob Faibussowitsch PetscCall(VecGetArray(x, &array)); 2203bf14a46SMatthew Knepley } 2213bf14a46SMatthew Knepley lu->rhs = array; 2223bf14a46SMatthew Knepley if (lu->commSize == 1) { 2239566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x, &array)); 2243bf14a46SMatthew Knepley } else { 2259566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x_seq, &array)); 2263bf14a46SMatthew Knepley } 2273bf14a46SMatthew Knepley 2283bf14a46SMatthew Knepley /* solve phase */ 2293bf14a46SMatthew Knepley /*-------------*/ 2303bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_SOLVE; 2313bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_REFINE; 232745c78f7SBarry Smith lu->iparm[IPARM_RHS_MAKING] = API_RHS_B; 2333bf14a46SMatthew Knepley 234*9371c9d4SSatish Balay PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 23508401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in solve phase: lu->iparm[IPARM_ERROR_NUMBER] = %" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 2363bf14a46SMatthew Knepley 2373bf14a46SMatthew Knepley if (lu->commSize == 1) { 2389566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x, &(lu->rhs))); 2393bf14a46SMatthew Knepley } else { 2409566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x_seq, &(lu->rhs))); 2413bf14a46SMatthew Knepley } 2423bf14a46SMatthew Knepley 2433bf14a46SMatthew Knepley if (lu->commSize > 1) { /* convert PaStiX centralized solution to petsc mpi x */ 2449566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(lu->scat_sol, x_seq, x, INSERT_VALUES, SCATTER_FORWARD)); 2459566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(lu->scat_sol, x_seq, x, INSERT_VALUES, SCATTER_FORWARD)); 2463bf14a46SMatthew Knepley } 2473bf14a46SMatthew Knepley PetscFunctionReturn(0); 2483bf14a46SMatthew Knepley } 2493bf14a46SMatthew Knepley 2503bf14a46SMatthew Knepley /* 2513bf14a46SMatthew Knepley Numeric factorisation using PaStiX solver. 2523bf14a46SMatthew Knepley 2533bf14a46SMatthew Knepley */ 254*9371c9d4SSatish Balay PetscErrorCode MatFactorNumeric_PaStiX(Mat F, Mat A, const MatFactorInfo *info) { 25558c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)(F)->data; 25641c8de11SBarry Smith Mat *tseq; 257b5e56a35SBarry Smith PetscInt icntl; 258b5e56a35SBarry Smith PetscInt M = A->rmap->N; 259ace3abfcSBarry Smith PetscBool valOnly, flg, isSym; 2603bf14a46SMatthew Knepley IS is_iden; 2613bf14a46SMatthew Knepley Vec b; 2623bf14a46SMatthew Knepley IS isrow; 26351a30905SBarry Smith PetscBool isSeqAIJ, isSeqSBAIJ, isMPIAIJ; 2643bf14a46SMatthew Knepley 2653bf14a46SMatthew Knepley PetscFunctionBegin; 2669566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQAIJ, &isSeqAIJ)); 2679566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIAIJ, &isMPIAIJ)); 2689566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQSBAIJ, &isSeqSBAIJ)); 2693bf14a46SMatthew Knepley if (lu->matstruc == DIFFERENT_NONZERO_PATTERN) { 2703bf14a46SMatthew Knepley (F)->ops->solve = MatSolve_PaStiX; 2713bf14a46SMatthew Knepley 2723bf14a46SMatthew Knepley /* Initialize a PASTIX instance */ 2739566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_dup(PetscObjectComm((PetscObject)A), &(lu->pastix_comm))); 2749566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(lu->pastix_comm, &lu->commRank)); 2759566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(lu->pastix_comm, &lu->commSize)); 2763bf14a46SMatthew Knepley 2773bf14a46SMatthew Knepley /* Set pastix options */ 2783bf14a46SMatthew Knepley lu->iparm[IPARM_MODIFY_PARAMETER] = API_NO; 2793bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_INIT; 2803bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_INIT; 2812205254eSKarl Rupp 2823bf14a46SMatthew Knepley lu->rhsnbr = 1; 2833bf14a46SMatthew Knepley 2843bf14a46SMatthew Knepley /* Call to set default pastix options */ 285*9371c9d4SSatish Balay PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 28608401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in MatFactorNumeric: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 2873bf14a46SMatthew Knepley 28826cc229bSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)F), ((PetscObject)F)->prefix, "PaStiX Options", "Mat"); 2893bf14a46SMatthew Knepley icntl = -1; 29041c8de11SBarry Smith lu->iparm[IPARM_VERBOSE] = API_VERBOSE_NOT; 2919566063dSJacob Faibussowitsch PetscCall(PetscOptionsInt("-mat_pastix_verbose", "iparm[IPARM_VERBOSE] : level of printing (0 to 2)", "None", lu->iparm[IPARM_VERBOSE], &icntl, &flg)); 292*9371c9d4SSatish Balay if ((flg && icntl >= 0) || PetscLogPrintInfo) { lu->iparm[IPARM_VERBOSE] = icntl; } 2933bf14a46SMatthew Knepley icntl = -1; 2949566063dSJacob Faibussowitsch PetscCall(PetscOptionsInt("-mat_pastix_threadnbr", "iparm[IPARM_THREAD_NBR] : Number of thread by MPI node", "None", lu->iparm[IPARM_THREAD_NBR], &icntl, &flg)); 295*9371c9d4SSatish Balay if ((flg && icntl > 0)) { lu->iparm[IPARM_THREAD_NBR] = icntl; } 296d0609cedSBarry Smith PetscOptionsEnd(); 2973bf14a46SMatthew Knepley valOnly = PETSC_FALSE; 29841c8de11SBarry Smith } else { 2995d6241c8SBarry Smith if (isSeqAIJ || isMPIAIJ) { 3009566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->colptr)); 3019566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->row)); 3029566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->val)); 3035d6241c8SBarry Smith valOnly = PETSC_FALSE; 3045d6241c8SBarry Smith } else valOnly = PETSC_TRUE; 3053bf14a46SMatthew Knepley } 3063bf14a46SMatthew Knepley 3073bf14a46SMatthew Knepley lu->iparm[IPARM_MATRIX_VERIFICATION] = API_YES; 3083bf14a46SMatthew Knepley 3093bf14a46SMatthew Knepley /* convert mpi A to seq mat A */ 3109566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, M, 0, 1, &isrow)); 3119566063dSJacob Faibussowitsch PetscCall(MatCreateSubMatrices(A, 1, &isrow, &isrow, MAT_INITIAL_MATRIX, &tseq)); 3129566063dSJacob Faibussowitsch PetscCall(ISDestroy(&isrow)); 3133bf14a46SMatthew Knepley 3149566063dSJacob Faibussowitsch PetscCall(MatConvertToCSC(*tseq, valOnly, &lu->n, &lu->colptr, &lu->row, &lu->val)); 3159566063dSJacob Faibussowitsch PetscCall(MatIsSymmetric(*tseq, 0.0, &isSym)); 3169566063dSJacob Faibussowitsch PetscCall(MatDestroyMatrices(1, &tseq)); 31741c8de11SBarry Smith 3185d6241c8SBarry Smith if (!lu->perm) { 3199566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(lu->n, &(lu->perm))); 3209566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(lu->n, &(lu->invp))); 3215d6241c8SBarry Smith } 3223bf14a46SMatthew Knepley 3233bf14a46SMatthew Knepley if (isSym) { 324745c78f7SBarry Smith /* On symmetric matrix, LLT */ 3253bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_YES; 32641c8de11SBarry Smith lu->iparm[IPARM_FACTORIZATION] = API_FACT_LDLT; 327f31ce8a6SBarry Smith } else { 328745c78f7SBarry Smith /* On unsymmetric matrix, LU */ 3293bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_NO; 3303bf14a46SMatthew Knepley lu->iparm[IPARM_FACTORIZATION] = API_FACT_LU; 3313bf14a46SMatthew Knepley } 3323bf14a46SMatthew Knepley 3333bf14a46SMatthew Knepley /*----------------*/ 3343bf14a46SMatthew Knepley if (lu->matstruc == DIFFERENT_NONZERO_PATTERN) { 33558c95f1bSBarry Smith if (!(isSeqAIJ || isSeqSBAIJ) && !lu->b_seq) { 3363bf14a46SMatthew Knepley /* PaStiX only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 3379566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF, A->cmap->N, &lu->b_seq)); 3389566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, A->cmap->N, 0, 1, &is_iden)); 3399566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A, NULL, &b)); 3409566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(b, is_iden, lu->b_seq, is_iden, &lu->scat_rhs)); 3419566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(lu->b_seq, is_iden, b, is_iden, &lu->scat_sol)); 3429566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is_iden)); 3439566063dSJacob Faibussowitsch PetscCall(VecDestroy(&b)); 3443bf14a46SMatthew Knepley } 3453bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_ORDERING; 3463bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_NUMFACT; 3473bf14a46SMatthew Knepley 348*9371c9d4SSatish Balay PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 34908401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in analysis phase: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 35041c8de11SBarry Smith } else { 3513bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_NUMFACT; 3523bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_NUMFACT; 353*9371c9d4SSatish Balay PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 35408401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in analysis phase: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 3553bf14a46SMatthew Knepley } 3563bf14a46SMatthew Knepley 3573bf14a46SMatthew Knepley (F)->assembled = PETSC_TRUE; 3583bf14a46SMatthew Knepley lu->matstruc = SAME_NONZERO_PATTERN; 3593bf14a46SMatthew Knepley lu->CleanUpPastix = PETSC_TRUE; 3603bf14a46SMatthew Knepley PetscFunctionReturn(0); 3613bf14a46SMatthew Knepley } 3623bf14a46SMatthew Knepley 3633bf14a46SMatthew Knepley /* Note the Petsc r and c permutations are ignored */ 364*9371c9d4SSatish Balay PetscErrorCode MatLUFactorSymbolic_AIJPASTIX(Mat F, Mat A, IS r, IS c, const MatFactorInfo *info) { 36558c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)F->data; 3663bf14a46SMatthew Knepley 3673bf14a46SMatthew Knepley PetscFunctionBegin; 3683bf14a46SMatthew Knepley lu->iparm[IPARM_FACTORIZATION] = API_FACT_LU; 3693bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_YES; 3703bf14a46SMatthew Knepley lu->matstruc = DIFFERENT_NONZERO_PATTERN; 3713bf14a46SMatthew Knepley F->ops->lufactornumeric = MatFactorNumeric_PaStiX; 3723bf14a46SMatthew Knepley PetscFunctionReturn(0); 3733bf14a46SMatthew Knepley } 3743bf14a46SMatthew Knepley 375*9371c9d4SSatish Balay PetscErrorCode MatCholeskyFactorSymbolic_SBAIJPASTIX(Mat F, Mat A, IS r, const MatFactorInfo *info) { 37658c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)(F)->data; 3773bf14a46SMatthew Knepley 3783bf14a46SMatthew Knepley PetscFunctionBegin; 3793bf14a46SMatthew Knepley lu->iparm[IPARM_FACTORIZATION] = API_FACT_LLT; 3803bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_NO; 3813bf14a46SMatthew Knepley lu->matstruc = DIFFERENT_NONZERO_PATTERN; 3823bf14a46SMatthew Knepley (F)->ops->choleskyfactornumeric = MatFactorNumeric_PaStiX; 3833bf14a46SMatthew Knepley PetscFunctionReturn(0); 3843bf14a46SMatthew Knepley } 3853bf14a46SMatthew Knepley 386*9371c9d4SSatish Balay PetscErrorCode MatView_PaStiX(Mat A, PetscViewer viewer) { 387ace3abfcSBarry Smith PetscBool iascii; 3883bf14a46SMatthew Knepley PetscViewerFormat format; 3893bf14a46SMatthew Knepley 3903bf14a46SMatthew Knepley PetscFunctionBegin; 3919566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 3923bf14a46SMatthew Knepley if (iascii) { 3939566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 3943bf14a46SMatthew Knepley if (format == PETSC_VIEWER_ASCII_INFO) { 39558c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)A->data; 396b5e56a35SBarry Smith 3979566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "PaStiX run parameters:\n")); 3989566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, " Matrix type : %s \n", ((lu->iparm[IPARM_SYM] == API_SYM_YES) ? "Symmetric" : "Unsymmetric"))); 3999566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, " Level of printing (0,1,2): %" PetscInt_FMT " \n", lu->iparm[IPARM_VERBOSE])); 4009566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, " Number of refinements iterations : %" PetscInt_FMT " \n", lu->iparm[IPARM_NBITER])); 4019566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF, " Error : %g \n", lu->dparm[DPARM_RELATIVE_ERROR])); 4023bf14a46SMatthew Knepley } 4033bf14a46SMatthew Knepley } 4043bf14a46SMatthew Knepley PetscFunctionReturn(0); 4053bf14a46SMatthew Knepley } 4063bf14a46SMatthew Knepley 4073bf14a46SMatthew Knepley /*MC 4082692d6eeSBarry Smith MATSOLVERPASTIX - A solver package providing direct solvers (LU) for distributed 4093bf14a46SMatthew Knepley and sequential matrices via the external package PaStiX. 4103bf14a46SMatthew Knepley 41190b3b921SSatish Balay Use ./configure --download-pastix --download-ptscotch to have PETSc installed with PasTiX 412c2b89b5dSBarry Smith 4133ca39a21SBarry Smith Use -pc_type lu -pc_factor_mat_solver_type pastix to use this direct solver 4143bf14a46SMatthew Knepley 4153bf14a46SMatthew Knepley Options Database Keys: 416b5e56a35SBarry Smith + -mat_pastix_verbose <0,1,2> - print level 417b5e56a35SBarry Smith - -mat_pastix_threadnbr <integer> - Set the thread number by MPI task. 4183bf14a46SMatthew Knepley 41995452b02SPatrick Sanan Notes: 42095452b02SPatrick Sanan This only works for matrices with symmetric nonzero structure, if you pass it a matrix with 421baed9decSBarry Smith nonsymmetric structure PasTiX and hence PETSc return with an error. 422baed9decSBarry Smith 4233bf14a46SMatthew Knepley Level: beginner 4243bf14a46SMatthew Knepley 425db781477SPatrick Sanan .seealso: `PCFactorSetMatSolverType()`, `MatSolverType` 42641c8de11SBarry Smith 4273bf14a46SMatthew Knepley M*/ 4283bf14a46SMatthew Knepley 429*9371c9d4SSatish Balay PetscErrorCode MatGetInfo_PaStiX(Mat A, MatInfoType flag, MatInfo *info) { 43058c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)A->data; 4313bf14a46SMatthew Knepley 4323bf14a46SMatthew Knepley PetscFunctionBegin; 4333bf14a46SMatthew Knepley info->block_size = 1.0; 4343bf14a46SMatthew Knepley info->nz_allocated = lu->iparm[IPARM_NNZEROS]; 4353bf14a46SMatthew Knepley info->nz_used = lu->iparm[IPARM_NNZEROS]; 4363bf14a46SMatthew Knepley info->nz_unneeded = 0.0; 4373bf14a46SMatthew Knepley info->assemblies = 0.0; 4383bf14a46SMatthew Knepley info->mallocs = 0.0; 4393bf14a46SMatthew Knepley info->memory = 0.0; 4403bf14a46SMatthew Knepley info->fill_ratio_given = 0; 4413bf14a46SMatthew Knepley info->fill_ratio_needed = 0; 4423bf14a46SMatthew Knepley info->factor_mallocs = 0; 4433bf14a46SMatthew Knepley PetscFunctionReturn(0); 4443bf14a46SMatthew Knepley } 4453bf14a46SMatthew Knepley 446*9371c9d4SSatish Balay static PetscErrorCode MatFactorGetSolverType_pastix(Mat A, MatSolverType *type) { 4473bf14a46SMatthew Knepley PetscFunctionBegin; 4482692d6eeSBarry Smith *type = MATSOLVERPASTIX; 4493bf14a46SMatthew Knepley PetscFunctionReturn(0); 4503bf14a46SMatthew Knepley } 4513bf14a46SMatthew Knepley 4523bf14a46SMatthew Knepley /* 4533bf14a46SMatthew Knepley The seq and mpi versions of this function are the same 4543bf14a46SMatthew Knepley */ 455*9371c9d4SSatish Balay static PetscErrorCode MatGetFactor_seqaij_pastix(Mat A, MatFactorType ftype, Mat *F) { 4563bf14a46SMatthew Knepley Mat B; 4573bf14a46SMatthew Knepley Mat_Pastix *pastix; 4583bf14a46SMatthew Knepley 4593bf14a46SMatthew Knepley PetscFunctionBegin; 4605f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_LU, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc AIJ matrices with PaStiX Cholesky, use SBAIJ matrix"); 4613bf14a46SMatthew Knepley /* Create the factorization matrix */ 4629566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 4639566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 4649566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name)); 4659566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 4663bf14a46SMatthew Knepley 46766e17bc3SBarry Smith B->trivialsymbolic = PETSC_TRUE; 4683bf14a46SMatthew Knepley B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJPASTIX; 4693bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 4703bf14a46SMatthew Knepley B->ops->getinfo = MatGetInfo_PaStiX; 4712205254eSKarl Rupp 4729566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix)); 4732205254eSKarl Rupp 474d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 4753bf14a46SMatthew Knepley 47600c67f3bSHong Zhang /* set solvertype */ 4779566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 4789566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype)); 47900c67f3bSHong Zhang 4809566063dSJacob Faibussowitsch PetscCall(PetscNewLog(B, &pastix)); 4812205254eSKarl Rupp 4823bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 4830298fd71SBarry Smith pastix->scat_rhs = NULL; 4840298fd71SBarry Smith pastix->scat_sol = NULL; 48558c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_External; 4863bf14a46SMatthew Knepley B->ops->destroy = MatDestroy_Pastix; 48758c95f1bSBarry Smith B->data = (void *)pastix; 4883bf14a46SMatthew Knepley 4893bf14a46SMatthew Knepley *F = B; 4903bf14a46SMatthew Knepley PetscFunctionReturn(0); 4913bf14a46SMatthew Knepley } 4923bf14a46SMatthew Knepley 493*9371c9d4SSatish Balay static PetscErrorCode MatGetFactor_mpiaij_pastix(Mat A, MatFactorType ftype, Mat *F) { 4943bf14a46SMatthew Knepley Mat B; 4953bf14a46SMatthew Knepley Mat_Pastix *pastix; 4963bf14a46SMatthew Knepley 4973bf14a46SMatthew Knepley PetscFunctionBegin; 4985f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_LU, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc AIJ matrices with PaStiX Cholesky, use SBAIJ matrix"); 4993bf14a46SMatthew Knepley /* Create the factorization matrix */ 5009566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 5019566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 5029566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name)); 5039566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 5043bf14a46SMatthew Knepley 50566e17bc3SBarry Smith B->trivialsymbolic = PETSC_TRUE; 5063bf14a46SMatthew Knepley B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJPASTIX; 5073bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 50858c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_PaStiX; 5099566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix)); 5102205254eSKarl Rupp 511d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 5123bf14a46SMatthew Knepley 51300c67f3bSHong Zhang /* set solvertype */ 5149566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 5159566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype)); 51600c67f3bSHong Zhang 5179566063dSJacob Faibussowitsch PetscCall(PetscNewLog(B, &pastix)); 5182205254eSKarl Rupp 5193bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 5200298fd71SBarry Smith pastix->scat_rhs = NULL; 5210298fd71SBarry Smith pastix->scat_sol = NULL; 52258c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_External; 5233bf14a46SMatthew Knepley B->ops->destroy = MatDestroy_Pastix; 52458c95f1bSBarry Smith B->data = (void *)pastix; 5253bf14a46SMatthew Knepley 5263bf14a46SMatthew Knepley *F = B; 5273bf14a46SMatthew Knepley PetscFunctionReturn(0); 5283bf14a46SMatthew Knepley } 5293bf14a46SMatthew Knepley 530*9371c9d4SSatish Balay static PetscErrorCode MatGetFactor_seqsbaij_pastix(Mat A, MatFactorType ftype, Mat *F) { 5313bf14a46SMatthew Knepley Mat B; 5323bf14a46SMatthew Knepley Mat_Pastix *pastix; 5333bf14a46SMatthew Knepley 5343bf14a46SMatthew Knepley PetscFunctionBegin; 5355f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_CHOLESKY, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc SBAIJ matrices with PaStiX LU, use AIJ matrix"); 5363bf14a46SMatthew Knepley /* Create the factorization matrix */ 5379566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 5389566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 5399566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name)); 5409566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 5413bf14a46SMatthew Knepley 54266e17bc3SBarry Smith B->trivialsymbolic = PETSC_TRUE; 5433bf14a46SMatthew Knepley B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJPASTIX; 5443bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 54558c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_PaStiX; 5469566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix)); 5472205254eSKarl Rupp 548d5f3da31SBarry Smith B->factortype = MAT_FACTOR_CHOLESKY; 5493bf14a46SMatthew Knepley 55000c67f3bSHong Zhang /* set solvertype */ 5519566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 5529566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype)); 55300c67f3bSHong Zhang 5549566063dSJacob Faibussowitsch PetscCall(PetscNewLog(B, &pastix)); 5552205254eSKarl Rupp 5563bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 5570298fd71SBarry Smith pastix->scat_rhs = NULL; 5580298fd71SBarry Smith pastix->scat_sol = NULL; 55958c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_External; 5603bf14a46SMatthew Knepley B->ops->destroy = MatDestroy_Pastix; 56158c95f1bSBarry Smith B->data = (void *)pastix; 5623bf14a46SMatthew Knepley *F = B; 5633bf14a46SMatthew Knepley PetscFunctionReturn(0); 5643bf14a46SMatthew Knepley } 5653bf14a46SMatthew Knepley 566*9371c9d4SSatish Balay static PetscErrorCode MatGetFactor_mpisbaij_pastix(Mat A, MatFactorType ftype, Mat *F) { 5673bf14a46SMatthew Knepley Mat B; 5683bf14a46SMatthew Knepley Mat_Pastix *pastix; 5693bf14a46SMatthew Knepley 5703bf14a46SMatthew Knepley PetscFunctionBegin; 5715f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_CHOLESKY, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc SBAIJ matrices with PaStiX LU, use AIJ matrix"); 57241c8de11SBarry Smith 5733bf14a46SMatthew Knepley /* Create the factorization matrix */ 5749566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 5759566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 5769566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name)); 5779566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 5783bf14a46SMatthew Knepley 5793bf14a46SMatthew Knepley B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJPASTIX; 5803bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 58158c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_PaStiX; 58258c95f1bSBarry Smith B->ops->destroy = MatDestroy_Pastix; 5839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix)); 5842205254eSKarl Rupp 585d5f3da31SBarry Smith B->factortype = MAT_FACTOR_CHOLESKY; 5863bf14a46SMatthew Knepley 58700c67f3bSHong Zhang /* set solvertype */ 5889566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 5899566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype)); 59000c67f3bSHong Zhang 5919566063dSJacob Faibussowitsch PetscCall(PetscNewLog(B, &pastix)); 5922205254eSKarl Rupp 5933bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 5940298fd71SBarry Smith pastix->scat_rhs = NULL; 5950298fd71SBarry Smith pastix->scat_sol = NULL; 59658c95f1bSBarry Smith B->data = (void *)pastix; 5973bf14a46SMatthew Knepley 5983bf14a46SMatthew Knepley *F = B; 5993bf14a46SMatthew Knepley PetscFunctionReturn(0); 6003bf14a46SMatthew Knepley } 601f7a08781SBarry Smith 602*9371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_Pastix(void) { 60342c9c57cSBarry Smith PetscFunctionBegin; 6049566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATMPIAIJ, MAT_FACTOR_LU, MatGetFactor_mpiaij_pastix)); 6059566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATSEQAIJ, MAT_FACTOR_LU, MatGetFactor_seqaij_pastix)); 6069566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATMPISBAIJ, MAT_FACTOR_CHOLESKY, MatGetFactor_mpisbaij_pastix)); 6079566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATSEQSBAIJ, MAT_FACTOR_CHOLESKY, MatGetFactor_seqsbaij_pastix)); 60842c9c57cSBarry Smith PetscFunctionReturn(0); 60942c9c57cSBarry Smith } 610