xref: /petsc/src/mat/impls/aij/mpi/pastix/pastix.c (revision 9371c9d470a9602b6d10a8bf50c9b2280a79e45a)
13bf14a46SMatthew Knepley /*
23bf14a46SMatthew Knepley  Provides an interface to the PaStiX sparse solver
33bf14a46SMatthew Knepley  */
4c6db04a5SJed Brown #include <../src/mat/impls/aij/seq/aij.h>
5c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h>
6c6db04a5SJed Brown #include <../src/mat/impls/sbaij/seq/sbaij.h>
7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h>
83bf14a46SMatthew Knepley 
9dbbbd53dSSatish Balay #if defined(PETSC_USE_COMPLEX)
105ec454cfSSatish Balay #define _H_COMPLEX
115ec454cfSSatish Balay #endif
125ec454cfSSatish Balay 
133bf14a46SMatthew Knepley EXTERN_C_BEGIN
14c6db04a5SJed Brown #include <pastix.h>
153bf14a46SMatthew Knepley EXTERN_C_END
163bf14a46SMatthew Knepley 
17519f805aSKarl Rupp #if defined(PETSC_USE_COMPLEX)
18519f805aSKarl Rupp #if defined(PETSC_USE_REAL_SINGLE)
195ec454cfSSatish Balay #define PASTIX_CALL c_pastix
205ec454cfSSatish Balay #else
215ec454cfSSatish Balay #define PASTIX_CALL z_pastix
225ec454cfSSatish Balay #endif
23d41469e0Sxavier lacoste 
24d41469e0Sxavier lacoste #else /* PETSC_USE_COMPLEX */
25d41469e0Sxavier lacoste 
26519f805aSKarl Rupp #if defined(PETSC_USE_REAL_SINGLE)
275ec454cfSSatish Balay #define PASTIX_CALL s_pastix
285ec454cfSSatish Balay #else
295ec454cfSSatish Balay #define PASTIX_CALL d_pastix
305ec454cfSSatish Balay #endif
31d41469e0Sxavier lacoste 
32d41469e0Sxavier lacoste #endif /* PETSC_USE_COMPLEX */
33d41469e0Sxavier lacoste 
34dbbbd53dSSatish Balay typedef PetscScalar PastixScalar;
35dbbbd53dSSatish Balay 
363bf14a46SMatthew Knepley typedef struct Mat_Pastix_ {
373bf14a46SMatthew Knepley   pastix_data_t *pastix_data; /* Pastix data storage structure                        */
383bf14a46SMatthew Knepley   MatStructure   matstruc;
393bf14a46SMatthew Knepley   PetscInt       n;                 /* Number of columns in the matrix                      */
403bf14a46SMatthew Knepley   PetscInt      *colptr;            /* Index of first element of each column in row and val */
413bf14a46SMatthew Knepley   PetscInt      *row;               /* Row of each element of the matrix                    */
423bf14a46SMatthew Knepley   PetscScalar   *val;               /* Value of each element of the matrix                  */
433bf14a46SMatthew Knepley   PetscInt      *perm;              /* Permutation tabular                                  */
443bf14a46SMatthew Knepley   PetscInt      *invp;              /* Reverse permutation tabular                          */
453bf14a46SMatthew Knepley   PetscScalar   *rhs;               /* Rhight-hand-side member                              */
463bf14a46SMatthew Knepley   PetscInt       rhsnbr;            /* Rhight-hand-side number (must be 1)                  */
47baed9decSBarry Smith   PetscInt       iparm[IPARM_SIZE]; /* Integer parameters                                   */
48baed9decSBarry Smith   double         dparm[DPARM_SIZE]; /* Floating point parameters                            */
493bf14a46SMatthew Knepley   MPI_Comm       pastix_comm;       /* PaStiX MPI communicator                              */
503bf14a46SMatthew Knepley   PetscMPIInt    commRank;          /* MPI rank                                             */
513bf14a46SMatthew Knepley   PetscMPIInt    commSize;          /* MPI communicator size                                */
52ace3abfcSBarry Smith   PetscBool      CleanUpPastix;     /* Boolean indicating if we call PaStiX clean step      */
533bf14a46SMatthew Knepley   VecScatter     scat_rhs;
543bf14a46SMatthew Knepley   VecScatter     scat_sol;
55f31ce8a6SBarry Smith   Vec            b_seq;
563bf14a46SMatthew Knepley } Mat_Pastix;
573bf14a46SMatthew Knepley 
5809573ac7SBarry Smith extern PetscErrorCode MatDuplicate_Pastix(Mat, MatDuplicateOption, Mat *);
593bf14a46SMatthew Knepley 
603bf14a46SMatthew Knepley /*
613bf14a46SMatthew Knepley    convert Petsc seqaij matrix to CSC: colptr[n], row[nz], val[nz]
623bf14a46SMatthew Knepley 
633bf14a46SMatthew Knepley   input:
643bf14a46SMatthew Knepley     A       - matrix in seqaij or mpisbaij (bs=1) format
653bf14a46SMatthew Knepley     valOnly - FALSE: spaces are allocated and values are set for the CSC
663bf14a46SMatthew Knepley               TRUE:  Only fill values
673bf14a46SMatthew Knepley   output:
683bf14a46SMatthew Knepley     n       - Size of the matrix
693bf14a46SMatthew Knepley     colptr  - Index of first element of each column in row and val
703bf14a46SMatthew Knepley     row     - Row of each element of the matrix
713bf14a46SMatthew Knepley     values  - Value of each element of the matrix
723bf14a46SMatthew Knepley  */
73*9371c9d4SSatish Balay PetscErrorCode MatConvertToCSC(Mat A, PetscBool valOnly, PetscInt *n, PetscInt **colptr, PetscInt **row, PetscScalar **values) {
743bf14a46SMatthew Knepley   Mat_SeqAIJ  *aa      = (Mat_SeqAIJ *)A->data;
753bf14a46SMatthew Knepley   PetscInt    *rowptr  = aa->i;
763bf14a46SMatthew Knepley   PetscInt    *col     = aa->j;
773bf14a46SMatthew Knepley   PetscScalar *rvalues = aa->a;
783bf14a46SMatthew Knepley   PetscInt     m       = A->rmap->N;
79745c78f7SBarry Smith   PetscInt     nnz;
803bf14a46SMatthew Knepley   PetscInt     i, j, k;
813bf14a46SMatthew Knepley   PetscInt     base = 1;
823bf14a46SMatthew Knepley   PetscInt     idx;
833bf14a46SMatthew Knepley   PetscInt     colidx;
843bf14a46SMatthew Knepley   PetscInt    *colcount;
85ace3abfcSBarry Smith   PetscBool    isSBAIJ;
86ace3abfcSBarry Smith   PetscBool    isSeqSBAIJ;
87ace3abfcSBarry Smith   PetscBool    isMpiSBAIJ;
88ace3abfcSBarry Smith   PetscBool    isSym;
893bf14a46SMatthew Knepley 
903bf14a46SMatthew Knepley   PetscFunctionBegin;
919566063dSJacob Faibussowitsch   PetscCall(MatIsSymmetric(A, 0.0, &isSym));
929566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSBAIJ, &isSBAIJ));
939566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQSBAIJ, &isSeqSBAIJ));
949566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPISBAIJ, &isMpiSBAIJ));
953bf14a46SMatthew Knepley 
96745c78f7SBarry Smith   *n = A->cmap->N;
97745c78f7SBarry Smith 
98745c78f7SBarry Smith   /* PaStiX only needs triangular matrix if matrix is symmetric
99745c78f7SBarry Smith    */
1002205254eSKarl Rupp   if (isSym && !(isSBAIJ || isSeqSBAIJ || isMpiSBAIJ)) nnz = (aa->nz - *n) / 2 + *n;
1012205254eSKarl Rupp   else nnz = aa->nz;
1023bf14a46SMatthew Knepley 
1033bf14a46SMatthew Knepley   if (!valOnly) {
1049566063dSJacob Faibussowitsch     PetscCall(PetscMalloc1((*n) + 1, colptr));
1059566063dSJacob Faibussowitsch     PetscCall(PetscMalloc1(nnz, row));
1069566063dSJacob Faibussowitsch     PetscCall(PetscMalloc1(nnz, values));
1073bf14a46SMatthew Knepley 
10841c8de11SBarry Smith     if (isSBAIJ || isSeqSBAIJ || isMpiSBAIJ) {
1099566063dSJacob Faibussowitsch       PetscCall(PetscArraycpy(*colptr, rowptr, (*n) + 1));
1102205254eSKarl Rupp       for (i = 0; i < *n + 1; i++) (*colptr)[i] += base;
1119566063dSJacob Faibussowitsch       PetscCall(PetscArraycpy(*row, col, nnz));
1122205254eSKarl Rupp       for (i = 0; i < nnz; i++) (*row)[i] += base;
1139566063dSJacob Faibussowitsch       PetscCall(PetscArraycpy(*values, rvalues, nnz));
11441c8de11SBarry Smith     } else {
1159566063dSJacob Faibussowitsch       PetscCall(PetscMalloc1(*n, &colcount));
11641c8de11SBarry Smith 
117f31ce8a6SBarry Smith       for (i = 0; i < m; i++) colcount[i] = 0;
1183bf14a46SMatthew Knepley       /* Fill-in colptr */
119f31ce8a6SBarry Smith       for (i = 0; i < m; i++) {
120f31ce8a6SBarry Smith         for (j = rowptr[i]; j < rowptr[i + 1]; j++) {
121f31ce8a6SBarry Smith           if (!isSym || col[j] <= i) colcount[col[j]]++;
122f31ce8a6SBarry Smith         }
123f31ce8a6SBarry Smith       }
124745c78f7SBarry Smith 
1253bf14a46SMatthew Knepley       (*colptr)[0] = base;
1263bf14a46SMatthew Knepley       for (j = 0; j < *n; j++) {
1273bf14a46SMatthew Knepley         (*colptr)[j + 1] = (*colptr)[j] + colcount[j];
128745c78f7SBarry Smith         /* in next loop we fill starting from (*colptr)[colidx] - base */
1293bf14a46SMatthew Knepley         colcount[j]      = -base;
1303bf14a46SMatthew Knepley       }
1313bf14a46SMatthew Knepley 
1323bf14a46SMatthew Knepley       /* Fill-in rows and values */
1333bf14a46SMatthew Knepley       for (i = 0; i < m; i++) {
1343bf14a46SMatthew Knepley         for (j = rowptr[i]; j < rowptr[i + 1]; j++) {
13541c8de11SBarry Smith           if (!isSym || col[j] <= i) {
1363bf14a46SMatthew Knepley             colidx         = col[j];
1373bf14a46SMatthew Knepley             idx            = (*colptr)[colidx] + colcount[colidx];
1383bf14a46SMatthew Knepley             (*row)[idx]    = i + base;
1393bf14a46SMatthew Knepley             (*values)[idx] = rvalues[j];
1403bf14a46SMatthew Knepley             colcount[colidx]++;
1413bf14a46SMatthew Knepley           }
1423bf14a46SMatthew Knepley         }
1433bf14a46SMatthew Knepley       }
1449566063dSJacob Faibussowitsch       PetscCall(PetscFree(colcount));
145745c78f7SBarry Smith     }
14641c8de11SBarry Smith   } else {
147745c78f7SBarry Smith     /* Fill-in only values */
1483bf14a46SMatthew Knepley     for (i = 0; i < m; i++) {
1493bf14a46SMatthew Knepley       for (j = rowptr[i]; j < rowptr[i + 1]; j++) {
1503bf14a46SMatthew Knepley         colidx = col[j];
1512205254eSKarl Rupp         if ((isSBAIJ || isSeqSBAIJ || isMpiSBAIJ) || !isSym || col[j] <= i) {
152745c78f7SBarry Smith           /* look for the value to fill */
153f31ce8a6SBarry Smith           for (k = (*colptr)[colidx] - base; k < (*colptr)[colidx + 1] - base; k++) {
154eb1f6c34SBarry Smith             if (((*row)[k] - base) == i) {
1553bf14a46SMatthew Knepley               (*values)[k] = rvalues[j];
1563bf14a46SMatthew Knepley               break;
1573bf14a46SMatthew Knepley             }
1583bf14a46SMatthew Knepley           }
159f31ce8a6SBarry Smith           /* data structure of sparse matrix has changed */
160aed4548fSBarry Smith           PetscCheck(k != (*colptr)[colidx + 1] - base, PETSC_COMM_SELF, PETSC_ERR_PLIB, "overflow on k %" PetscInt_FMT, k);
1613bf14a46SMatthew Knepley         }
1623bf14a46SMatthew Knepley       }
1633bf14a46SMatthew Knepley     }
164745c78f7SBarry Smith   }
1653bf14a46SMatthew Knepley   PetscFunctionReturn(0);
1663bf14a46SMatthew Knepley }
1673bf14a46SMatthew Knepley 
1683bf14a46SMatthew Knepley /*
1693bf14a46SMatthew Knepley   Call clean step of PaStiX if lu->CleanUpPastix == true.
1703bf14a46SMatthew Knepley   Free the CSC matrix.
1713bf14a46SMatthew Knepley  */
172*9371c9d4SSatish Balay PetscErrorCode MatDestroy_Pastix(Mat A) {
17358c95f1bSBarry Smith   Mat_Pastix *lu = (Mat_Pastix *)A->data;
174745c78f7SBarry Smith 
1753bf14a46SMatthew Knepley   PetscFunctionBegin;
17658c95f1bSBarry Smith   if (lu->CleanUpPastix) {
1773bf14a46SMatthew Knepley     /* Terminate instance, deallocate memories */
1789566063dSJacob Faibussowitsch     PetscCall(VecScatterDestroy(&lu->scat_rhs));
1799566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&lu->b_seq));
1809566063dSJacob Faibussowitsch     PetscCall(VecScatterDestroy(&lu->scat_sol));
1813bf14a46SMatthew Knepley 
1823bf14a46SMatthew Knepley     lu->iparm[IPARM_START_TASK] = API_TASK_CLEAN;
1833bf14a46SMatthew Knepley     lu->iparm[IPARM_END_TASK]   = API_TASK_CLEAN;
1843bf14a46SMatthew Knepley 
185*9371c9d4SSatish Balay     PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm);
18608401ef6SPierre Jolivet     PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in destroy: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]);
1879566063dSJacob Faibussowitsch     PetscCall(PetscFree(lu->colptr));
1889566063dSJacob Faibussowitsch     PetscCall(PetscFree(lu->row));
1899566063dSJacob Faibussowitsch     PetscCall(PetscFree(lu->val));
1909566063dSJacob Faibussowitsch     PetscCall(PetscFree(lu->perm));
1919566063dSJacob Faibussowitsch     PetscCall(PetscFree(lu->invp));
1929566063dSJacob Faibussowitsch     PetscCallMPI(MPI_Comm_free(&(lu->pastix_comm)));
1933bf14a46SMatthew Knepley   }
1942e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatFactorGetSolverType_C", NULL));
1959566063dSJacob Faibussowitsch   PetscCall(PetscFree(A->data));
1963bf14a46SMatthew Knepley   PetscFunctionReturn(0);
1973bf14a46SMatthew Knepley }
1983bf14a46SMatthew Knepley 
1993bf14a46SMatthew Knepley /*
2003bf14a46SMatthew Knepley   Gather right-hand-side.
2013bf14a46SMatthew Knepley   Call for Solve step.
2023bf14a46SMatthew Knepley   Scatter solution.
2033bf14a46SMatthew Knepley  */
204*9371c9d4SSatish Balay PetscErrorCode MatSolve_PaStiX(Mat A, Vec b, Vec x) {
20558c95f1bSBarry Smith   Mat_Pastix  *lu = (Mat_Pastix *)A->data;
2063bf14a46SMatthew Knepley   PetscScalar *array;
2073bf14a46SMatthew Knepley   Vec          x_seq;
2083bf14a46SMatthew Knepley 
2093bf14a46SMatthew Knepley   PetscFunctionBegin;
2103bf14a46SMatthew Knepley   lu->rhsnbr = 1;
2113bf14a46SMatthew Knepley   x_seq      = lu->b_seq;
2123bf14a46SMatthew Knepley   if (lu->commSize > 1) {
21341ffd417SStefano Zampini     /* PaStiX only supports centralized rhs. Scatter b into a sequential rhs vector */
2149566063dSJacob Faibussowitsch     PetscCall(VecScatterBegin(lu->scat_rhs, b, x_seq, INSERT_VALUES, SCATTER_FORWARD));
2159566063dSJacob Faibussowitsch     PetscCall(VecScatterEnd(lu->scat_rhs, b, x_seq, INSERT_VALUES, SCATTER_FORWARD));
2169566063dSJacob Faibussowitsch     PetscCall(VecGetArray(x_seq, &array));
21741c8de11SBarry Smith   } else { /* size == 1 */
2189566063dSJacob Faibussowitsch     PetscCall(VecCopy(b, x));
2199566063dSJacob Faibussowitsch     PetscCall(VecGetArray(x, &array));
2203bf14a46SMatthew Knepley   }
2213bf14a46SMatthew Knepley   lu->rhs = array;
2223bf14a46SMatthew Knepley   if (lu->commSize == 1) {
2239566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(x, &array));
2243bf14a46SMatthew Knepley   } else {
2259566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(x_seq, &array));
2263bf14a46SMatthew Knepley   }
2273bf14a46SMatthew Knepley 
2283bf14a46SMatthew Knepley   /* solve phase */
2293bf14a46SMatthew Knepley   /*-------------*/
2303bf14a46SMatthew Knepley   lu->iparm[IPARM_START_TASK] = API_TASK_SOLVE;
2313bf14a46SMatthew Knepley   lu->iparm[IPARM_END_TASK]   = API_TASK_REFINE;
232745c78f7SBarry Smith   lu->iparm[IPARM_RHS_MAKING] = API_RHS_B;
2333bf14a46SMatthew Knepley 
234*9371c9d4SSatish Balay   PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm);
23508401ef6SPierre Jolivet   PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in solve phase: lu->iparm[IPARM_ERROR_NUMBER] = %" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]);
2363bf14a46SMatthew Knepley 
2373bf14a46SMatthew Knepley   if (lu->commSize == 1) {
2389566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(x, &(lu->rhs)));
2393bf14a46SMatthew Knepley   } else {
2409566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(x_seq, &(lu->rhs)));
2413bf14a46SMatthew Knepley   }
2423bf14a46SMatthew Knepley 
2433bf14a46SMatthew Knepley   if (lu->commSize > 1) { /* convert PaStiX centralized solution to petsc mpi x */
2449566063dSJacob Faibussowitsch     PetscCall(VecScatterBegin(lu->scat_sol, x_seq, x, INSERT_VALUES, SCATTER_FORWARD));
2459566063dSJacob Faibussowitsch     PetscCall(VecScatterEnd(lu->scat_sol, x_seq, x, INSERT_VALUES, SCATTER_FORWARD));
2463bf14a46SMatthew Knepley   }
2473bf14a46SMatthew Knepley   PetscFunctionReturn(0);
2483bf14a46SMatthew Knepley }
2493bf14a46SMatthew Knepley 
2503bf14a46SMatthew Knepley /*
2513bf14a46SMatthew Knepley   Numeric factorisation using PaStiX solver.
2523bf14a46SMatthew Knepley 
2533bf14a46SMatthew Knepley  */
254*9371c9d4SSatish Balay PetscErrorCode MatFactorNumeric_PaStiX(Mat F, Mat A, const MatFactorInfo *info) {
25558c95f1bSBarry Smith   Mat_Pastix *lu = (Mat_Pastix *)(F)->data;
25641c8de11SBarry Smith   Mat        *tseq;
257b5e56a35SBarry Smith   PetscInt    icntl;
258b5e56a35SBarry Smith   PetscInt    M = A->rmap->N;
259ace3abfcSBarry Smith   PetscBool   valOnly, flg, isSym;
2603bf14a46SMatthew Knepley   IS          is_iden;
2613bf14a46SMatthew Knepley   Vec         b;
2623bf14a46SMatthew Knepley   IS          isrow;
26351a30905SBarry Smith   PetscBool   isSeqAIJ, isSeqSBAIJ, isMPIAIJ;
2643bf14a46SMatthew Knepley 
2653bf14a46SMatthew Knepley   PetscFunctionBegin;
2669566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQAIJ, &isSeqAIJ));
2679566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIAIJ, &isMPIAIJ));
2689566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQSBAIJ, &isSeqSBAIJ));
2693bf14a46SMatthew Knepley   if (lu->matstruc == DIFFERENT_NONZERO_PATTERN) {
2703bf14a46SMatthew Knepley     (F)->ops->solve = MatSolve_PaStiX;
2713bf14a46SMatthew Knepley 
2723bf14a46SMatthew Knepley     /* Initialize a PASTIX instance */
2739566063dSJacob Faibussowitsch     PetscCallMPI(MPI_Comm_dup(PetscObjectComm((PetscObject)A), &(lu->pastix_comm)));
2749566063dSJacob Faibussowitsch     PetscCallMPI(MPI_Comm_rank(lu->pastix_comm, &lu->commRank));
2759566063dSJacob Faibussowitsch     PetscCallMPI(MPI_Comm_size(lu->pastix_comm, &lu->commSize));
2763bf14a46SMatthew Knepley 
2773bf14a46SMatthew Knepley     /* Set pastix options */
2783bf14a46SMatthew Knepley     lu->iparm[IPARM_MODIFY_PARAMETER] = API_NO;
2793bf14a46SMatthew Knepley     lu->iparm[IPARM_START_TASK]       = API_TASK_INIT;
2803bf14a46SMatthew Knepley     lu->iparm[IPARM_END_TASK]         = API_TASK_INIT;
2812205254eSKarl Rupp 
2823bf14a46SMatthew Knepley     lu->rhsnbr = 1;
2833bf14a46SMatthew Knepley 
2843bf14a46SMatthew Knepley     /* Call to set default pastix options */
285*9371c9d4SSatish Balay     PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm);
28608401ef6SPierre Jolivet     PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in MatFactorNumeric: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]);
2873bf14a46SMatthew Knepley 
28826cc229bSBarry Smith     PetscOptionsBegin(PetscObjectComm((PetscObject)F), ((PetscObject)F)->prefix, "PaStiX Options", "Mat");
2893bf14a46SMatthew Knepley     icntl                    = -1;
29041c8de11SBarry Smith     lu->iparm[IPARM_VERBOSE] = API_VERBOSE_NOT;
2919566063dSJacob Faibussowitsch     PetscCall(PetscOptionsInt("-mat_pastix_verbose", "iparm[IPARM_VERBOSE] : level of printing (0 to 2)", "None", lu->iparm[IPARM_VERBOSE], &icntl, &flg));
292*9371c9d4SSatish Balay     if ((flg && icntl >= 0) || PetscLogPrintInfo) { lu->iparm[IPARM_VERBOSE] = icntl; }
2933bf14a46SMatthew Knepley     icntl = -1;
2949566063dSJacob Faibussowitsch     PetscCall(PetscOptionsInt("-mat_pastix_threadnbr", "iparm[IPARM_THREAD_NBR] : Number of thread by MPI node", "None", lu->iparm[IPARM_THREAD_NBR], &icntl, &flg));
295*9371c9d4SSatish Balay     if ((flg && icntl > 0)) { lu->iparm[IPARM_THREAD_NBR] = icntl; }
296d0609cedSBarry Smith     PetscOptionsEnd();
2973bf14a46SMatthew Knepley     valOnly = PETSC_FALSE;
29841c8de11SBarry Smith   } else {
2995d6241c8SBarry Smith     if (isSeqAIJ || isMPIAIJ) {
3009566063dSJacob Faibussowitsch       PetscCall(PetscFree(lu->colptr));
3019566063dSJacob Faibussowitsch       PetscCall(PetscFree(lu->row));
3029566063dSJacob Faibussowitsch       PetscCall(PetscFree(lu->val));
3035d6241c8SBarry Smith       valOnly = PETSC_FALSE;
3045d6241c8SBarry Smith     } else valOnly = PETSC_TRUE;
3053bf14a46SMatthew Knepley   }
3063bf14a46SMatthew Knepley 
3073bf14a46SMatthew Knepley   lu->iparm[IPARM_MATRIX_VERIFICATION] = API_YES;
3083bf14a46SMatthew Knepley 
3093bf14a46SMatthew Knepley   /* convert mpi A to seq mat A */
3109566063dSJacob Faibussowitsch   PetscCall(ISCreateStride(PETSC_COMM_SELF, M, 0, 1, &isrow));
3119566063dSJacob Faibussowitsch   PetscCall(MatCreateSubMatrices(A, 1, &isrow, &isrow, MAT_INITIAL_MATRIX, &tseq));
3129566063dSJacob Faibussowitsch   PetscCall(ISDestroy(&isrow));
3133bf14a46SMatthew Knepley 
3149566063dSJacob Faibussowitsch   PetscCall(MatConvertToCSC(*tseq, valOnly, &lu->n, &lu->colptr, &lu->row, &lu->val));
3159566063dSJacob Faibussowitsch   PetscCall(MatIsSymmetric(*tseq, 0.0, &isSym));
3169566063dSJacob Faibussowitsch   PetscCall(MatDestroyMatrices(1, &tseq));
31741c8de11SBarry Smith 
3185d6241c8SBarry Smith   if (!lu->perm) {
3199566063dSJacob Faibussowitsch     PetscCall(PetscMalloc1(lu->n, &(lu->perm)));
3209566063dSJacob Faibussowitsch     PetscCall(PetscMalloc1(lu->n, &(lu->invp)));
3215d6241c8SBarry Smith   }
3223bf14a46SMatthew Knepley 
3233bf14a46SMatthew Knepley   if (isSym) {
324745c78f7SBarry Smith     /* On symmetric matrix, LLT */
3253bf14a46SMatthew Knepley     lu->iparm[IPARM_SYM]           = API_SYM_YES;
32641c8de11SBarry Smith     lu->iparm[IPARM_FACTORIZATION] = API_FACT_LDLT;
327f31ce8a6SBarry Smith   } else {
328745c78f7SBarry Smith     /* On unsymmetric matrix, LU */
3293bf14a46SMatthew Knepley     lu->iparm[IPARM_SYM]           = API_SYM_NO;
3303bf14a46SMatthew Knepley     lu->iparm[IPARM_FACTORIZATION] = API_FACT_LU;
3313bf14a46SMatthew Knepley   }
3323bf14a46SMatthew Knepley 
3333bf14a46SMatthew Knepley   /*----------------*/
3343bf14a46SMatthew Knepley   if (lu->matstruc == DIFFERENT_NONZERO_PATTERN) {
33558c95f1bSBarry Smith     if (!(isSeqAIJ || isSeqSBAIJ) && !lu->b_seq) {
3363bf14a46SMatthew Knepley       /* PaStiX only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */
3379566063dSJacob Faibussowitsch       PetscCall(VecCreateSeq(PETSC_COMM_SELF, A->cmap->N, &lu->b_seq));
3389566063dSJacob Faibussowitsch       PetscCall(ISCreateStride(PETSC_COMM_SELF, A->cmap->N, 0, 1, &is_iden));
3399566063dSJacob Faibussowitsch       PetscCall(MatCreateVecs(A, NULL, &b));
3409566063dSJacob Faibussowitsch       PetscCall(VecScatterCreate(b, is_iden, lu->b_seq, is_iden, &lu->scat_rhs));
3419566063dSJacob Faibussowitsch       PetscCall(VecScatterCreate(lu->b_seq, is_iden, b, is_iden, &lu->scat_sol));
3429566063dSJacob Faibussowitsch       PetscCall(ISDestroy(&is_iden));
3439566063dSJacob Faibussowitsch       PetscCall(VecDestroy(&b));
3443bf14a46SMatthew Knepley     }
3453bf14a46SMatthew Knepley     lu->iparm[IPARM_START_TASK] = API_TASK_ORDERING;
3463bf14a46SMatthew Knepley     lu->iparm[IPARM_END_TASK]   = API_TASK_NUMFACT;
3473bf14a46SMatthew Knepley 
348*9371c9d4SSatish Balay     PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm);
34908401ef6SPierre Jolivet     PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in analysis phase: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]);
35041c8de11SBarry Smith   } else {
3513bf14a46SMatthew Knepley     lu->iparm[IPARM_START_TASK] = API_TASK_NUMFACT;
3523bf14a46SMatthew Knepley     lu->iparm[IPARM_END_TASK]   = API_TASK_NUMFACT;
353*9371c9d4SSatish Balay     PASTIX_CALL(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm);
35408401ef6SPierre Jolivet     PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in analysis phase: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]);
3553bf14a46SMatthew Knepley   }
3563bf14a46SMatthew Knepley 
3573bf14a46SMatthew Knepley   (F)->assembled    = PETSC_TRUE;
3583bf14a46SMatthew Knepley   lu->matstruc      = SAME_NONZERO_PATTERN;
3593bf14a46SMatthew Knepley   lu->CleanUpPastix = PETSC_TRUE;
3603bf14a46SMatthew Knepley   PetscFunctionReturn(0);
3613bf14a46SMatthew Knepley }
3623bf14a46SMatthew Knepley 
3633bf14a46SMatthew Knepley /* Note the Petsc r and c permutations are ignored */
364*9371c9d4SSatish Balay PetscErrorCode MatLUFactorSymbolic_AIJPASTIX(Mat F, Mat A, IS r, IS c, const MatFactorInfo *info) {
36558c95f1bSBarry Smith   Mat_Pastix *lu = (Mat_Pastix *)F->data;
3663bf14a46SMatthew Knepley 
3673bf14a46SMatthew Knepley   PetscFunctionBegin;
3683bf14a46SMatthew Knepley   lu->iparm[IPARM_FACTORIZATION] = API_FACT_LU;
3693bf14a46SMatthew Knepley   lu->iparm[IPARM_SYM]           = API_SYM_YES;
3703bf14a46SMatthew Knepley   lu->matstruc                   = DIFFERENT_NONZERO_PATTERN;
3713bf14a46SMatthew Knepley   F->ops->lufactornumeric        = MatFactorNumeric_PaStiX;
3723bf14a46SMatthew Knepley   PetscFunctionReturn(0);
3733bf14a46SMatthew Knepley }
3743bf14a46SMatthew Knepley 
375*9371c9d4SSatish Balay PetscErrorCode MatCholeskyFactorSymbolic_SBAIJPASTIX(Mat F, Mat A, IS r, const MatFactorInfo *info) {
37658c95f1bSBarry Smith   Mat_Pastix *lu = (Mat_Pastix *)(F)->data;
3773bf14a46SMatthew Knepley 
3783bf14a46SMatthew Knepley   PetscFunctionBegin;
3793bf14a46SMatthew Knepley   lu->iparm[IPARM_FACTORIZATION]  = API_FACT_LLT;
3803bf14a46SMatthew Knepley   lu->iparm[IPARM_SYM]            = API_SYM_NO;
3813bf14a46SMatthew Knepley   lu->matstruc                    = DIFFERENT_NONZERO_PATTERN;
3823bf14a46SMatthew Knepley   (F)->ops->choleskyfactornumeric = MatFactorNumeric_PaStiX;
3833bf14a46SMatthew Knepley   PetscFunctionReturn(0);
3843bf14a46SMatthew Knepley }
3853bf14a46SMatthew Knepley 
386*9371c9d4SSatish Balay PetscErrorCode MatView_PaStiX(Mat A, PetscViewer viewer) {
387ace3abfcSBarry Smith   PetscBool         iascii;
3883bf14a46SMatthew Knepley   PetscViewerFormat format;
3893bf14a46SMatthew Knepley 
3903bf14a46SMatthew Knepley   PetscFunctionBegin;
3919566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii));
3923bf14a46SMatthew Knepley   if (iascii) {
3939566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetFormat(viewer, &format));
3943bf14a46SMatthew Knepley     if (format == PETSC_VIEWER_ASCII_INFO) {
39558c95f1bSBarry Smith       Mat_Pastix *lu = (Mat_Pastix *)A->data;
396b5e56a35SBarry Smith 
3979566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "PaStiX run parameters:\n"));
3989566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Matrix type :                      %s \n", ((lu->iparm[IPARM_SYM] == API_SYM_YES) ? "Symmetric" : "Unsymmetric")));
3999566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Level of printing (0,1,2):         %" PetscInt_FMT " \n", lu->iparm[IPARM_VERBOSE]));
4009566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPrintf(viewer, "  Number of refinements iterations : %" PetscInt_FMT " \n", lu->iparm[IPARM_NBITER]));
4019566063dSJacob Faibussowitsch       PetscCall(PetscPrintf(PETSC_COMM_SELF, "  Error :                        %g \n", lu->dparm[DPARM_RELATIVE_ERROR]));
4023bf14a46SMatthew Knepley     }
4033bf14a46SMatthew Knepley   }
4043bf14a46SMatthew Knepley   PetscFunctionReturn(0);
4053bf14a46SMatthew Knepley }
4063bf14a46SMatthew Knepley 
4073bf14a46SMatthew Knepley /*MC
4082692d6eeSBarry Smith      MATSOLVERPASTIX  - A solver package providing direct solvers (LU) for distributed
4093bf14a46SMatthew Knepley   and sequential matrices via the external package PaStiX.
4103bf14a46SMatthew Knepley 
41190b3b921SSatish Balay   Use ./configure --download-pastix --download-ptscotch  to have PETSc installed with PasTiX
412c2b89b5dSBarry Smith 
4133ca39a21SBarry Smith   Use -pc_type lu -pc_factor_mat_solver_type pastix to use this direct solver
4143bf14a46SMatthew Knepley 
4153bf14a46SMatthew Knepley   Options Database Keys:
416b5e56a35SBarry Smith + -mat_pastix_verbose   <0,1,2>   - print level
417b5e56a35SBarry Smith - -mat_pastix_threadnbr <integer> - Set the thread number by MPI task.
4183bf14a46SMatthew Knepley 
41995452b02SPatrick Sanan   Notes:
42095452b02SPatrick Sanan     This only works for matrices with symmetric nonzero structure, if you pass it a matrix with
421baed9decSBarry Smith    nonsymmetric structure PasTiX and hence PETSc return with an error.
422baed9decSBarry Smith 
4233bf14a46SMatthew Knepley   Level: beginner
4243bf14a46SMatthew Knepley 
425db781477SPatrick Sanan .seealso: `PCFactorSetMatSolverType()`, `MatSolverType`
42641c8de11SBarry Smith 
4273bf14a46SMatthew Knepley M*/
4283bf14a46SMatthew Knepley 
429*9371c9d4SSatish Balay PetscErrorCode MatGetInfo_PaStiX(Mat A, MatInfoType flag, MatInfo *info) {
43058c95f1bSBarry Smith   Mat_Pastix *lu = (Mat_Pastix *)A->data;
4313bf14a46SMatthew Knepley 
4323bf14a46SMatthew Knepley   PetscFunctionBegin;
4333bf14a46SMatthew Knepley   info->block_size        = 1.0;
4343bf14a46SMatthew Knepley   info->nz_allocated      = lu->iparm[IPARM_NNZEROS];
4353bf14a46SMatthew Knepley   info->nz_used           = lu->iparm[IPARM_NNZEROS];
4363bf14a46SMatthew Knepley   info->nz_unneeded       = 0.0;
4373bf14a46SMatthew Knepley   info->assemblies        = 0.0;
4383bf14a46SMatthew Knepley   info->mallocs           = 0.0;
4393bf14a46SMatthew Knepley   info->memory            = 0.0;
4403bf14a46SMatthew Knepley   info->fill_ratio_given  = 0;
4413bf14a46SMatthew Knepley   info->fill_ratio_needed = 0;
4423bf14a46SMatthew Knepley   info->factor_mallocs    = 0;
4433bf14a46SMatthew Knepley   PetscFunctionReturn(0);
4443bf14a46SMatthew Knepley }
4453bf14a46SMatthew Knepley 
446*9371c9d4SSatish Balay static PetscErrorCode MatFactorGetSolverType_pastix(Mat A, MatSolverType *type) {
4473bf14a46SMatthew Knepley   PetscFunctionBegin;
4482692d6eeSBarry Smith   *type = MATSOLVERPASTIX;
4493bf14a46SMatthew Knepley   PetscFunctionReturn(0);
4503bf14a46SMatthew Knepley }
4513bf14a46SMatthew Knepley 
4523bf14a46SMatthew Knepley /*
4533bf14a46SMatthew Knepley     The seq and mpi versions of this function are the same
4543bf14a46SMatthew Knepley */
455*9371c9d4SSatish Balay static PetscErrorCode MatGetFactor_seqaij_pastix(Mat A, MatFactorType ftype, Mat *F) {
4563bf14a46SMatthew Knepley   Mat         B;
4573bf14a46SMatthew Knepley   Mat_Pastix *pastix;
4583bf14a46SMatthew Knepley 
4593bf14a46SMatthew Knepley   PetscFunctionBegin;
4605f80ce2aSJacob Faibussowitsch   PetscCheck(ftype == MAT_FACTOR_LU, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc AIJ matrices with PaStiX Cholesky, use SBAIJ matrix");
4613bf14a46SMatthew Knepley   /* Create the factorization matrix */
4629566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B));
4639566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N));
4649566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name));
4659566063dSJacob Faibussowitsch   PetscCall(MatSetUp(B));
4663bf14a46SMatthew Knepley 
46766e17bc3SBarry Smith   B->trivialsymbolic       = PETSC_TRUE;
4683bf14a46SMatthew Knepley   B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJPASTIX;
4693bf14a46SMatthew Knepley   B->ops->view             = MatView_PaStiX;
4703bf14a46SMatthew Knepley   B->ops->getinfo          = MatGetInfo_PaStiX;
4712205254eSKarl Rupp 
4729566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix));
4732205254eSKarl Rupp 
474d5f3da31SBarry Smith   B->factortype = MAT_FACTOR_LU;
4753bf14a46SMatthew Knepley 
47600c67f3bSHong Zhang   /* set solvertype */
4779566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->solvertype));
4789566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype));
47900c67f3bSHong Zhang 
4809566063dSJacob Faibussowitsch   PetscCall(PetscNewLog(B, &pastix));
4812205254eSKarl Rupp 
4823bf14a46SMatthew Knepley   pastix->CleanUpPastix = PETSC_FALSE;
4830298fd71SBarry Smith   pastix->scat_rhs      = NULL;
4840298fd71SBarry Smith   pastix->scat_sol      = NULL;
48558c95f1bSBarry Smith   B->ops->getinfo       = MatGetInfo_External;
4863bf14a46SMatthew Knepley   B->ops->destroy       = MatDestroy_Pastix;
48758c95f1bSBarry Smith   B->data               = (void *)pastix;
4883bf14a46SMatthew Knepley 
4893bf14a46SMatthew Knepley   *F = B;
4903bf14a46SMatthew Knepley   PetscFunctionReturn(0);
4913bf14a46SMatthew Knepley }
4923bf14a46SMatthew Knepley 
493*9371c9d4SSatish Balay static PetscErrorCode MatGetFactor_mpiaij_pastix(Mat A, MatFactorType ftype, Mat *F) {
4943bf14a46SMatthew Knepley   Mat         B;
4953bf14a46SMatthew Knepley   Mat_Pastix *pastix;
4963bf14a46SMatthew Knepley 
4973bf14a46SMatthew Knepley   PetscFunctionBegin;
4985f80ce2aSJacob Faibussowitsch   PetscCheck(ftype == MAT_FACTOR_LU, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc AIJ matrices with PaStiX Cholesky, use SBAIJ matrix");
4993bf14a46SMatthew Knepley   /* Create the factorization matrix */
5009566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B));
5019566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N));
5029566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name));
5039566063dSJacob Faibussowitsch   PetscCall(MatSetUp(B));
5043bf14a46SMatthew Knepley 
50566e17bc3SBarry Smith   B->trivialsymbolic       = PETSC_TRUE;
5063bf14a46SMatthew Knepley   B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJPASTIX;
5073bf14a46SMatthew Knepley   B->ops->view             = MatView_PaStiX;
50858c95f1bSBarry Smith   B->ops->getinfo          = MatGetInfo_PaStiX;
5099566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix));
5102205254eSKarl Rupp 
511d5f3da31SBarry Smith   B->factortype = MAT_FACTOR_LU;
5123bf14a46SMatthew Knepley 
51300c67f3bSHong Zhang   /* set solvertype */
5149566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->solvertype));
5159566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype));
51600c67f3bSHong Zhang 
5179566063dSJacob Faibussowitsch   PetscCall(PetscNewLog(B, &pastix));
5182205254eSKarl Rupp 
5193bf14a46SMatthew Knepley   pastix->CleanUpPastix = PETSC_FALSE;
5200298fd71SBarry Smith   pastix->scat_rhs      = NULL;
5210298fd71SBarry Smith   pastix->scat_sol      = NULL;
52258c95f1bSBarry Smith   B->ops->getinfo       = MatGetInfo_External;
5233bf14a46SMatthew Knepley   B->ops->destroy       = MatDestroy_Pastix;
52458c95f1bSBarry Smith   B->data               = (void *)pastix;
5253bf14a46SMatthew Knepley 
5263bf14a46SMatthew Knepley   *F = B;
5273bf14a46SMatthew Knepley   PetscFunctionReturn(0);
5283bf14a46SMatthew Knepley }
5293bf14a46SMatthew Knepley 
530*9371c9d4SSatish Balay static PetscErrorCode MatGetFactor_seqsbaij_pastix(Mat A, MatFactorType ftype, Mat *F) {
5313bf14a46SMatthew Knepley   Mat         B;
5323bf14a46SMatthew Knepley   Mat_Pastix *pastix;
5333bf14a46SMatthew Knepley 
5343bf14a46SMatthew Knepley   PetscFunctionBegin;
5355f80ce2aSJacob Faibussowitsch   PetscCheck(ftype == MAT_FACTOR_CHOLESKY, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc SBAIJ matrices with PaStiX LU, use AIJ matrix");
5363bf14a46SMatthew Knepley   /* Create the factorization matrix */
5379566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B));
5389566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N));
5399566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name));
5409566063dSJacob Faibussowitsch   PetscCall(MatSetUp(B));
5413bf14a46SMatthew Knepley 
54266e17bc3SBarry Smith   B->trivialsymbolic             = PETSC_TRUE;
5433bf14a46SMatthew Knepley   B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJPASTIX;
5443bf14a46SMatthew Knepley   B->ops->view                   = MatView_PaStiX;
54558c95f1bSBarry Smith   B->ops->getinfo                = MatGetInfo_PaStiX;
5469566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix));
5472205254eSKarl Rupp 
548d5f3da31SBarry Smith   B->factortype = MAT_FACTOR_CHOLESKY;
5493bf14a46SMatthew Knepley 
55000c67f3bSHong Zhang   /* set solvertype */
5519566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->solvertype));
5529566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype));
55300c67f3bSHong Zhang 
5549566063dSJacob Faibussowitsch   PetscCall(PetscNewLog(B, &pastix));
5552205254eSKarl Rupp 
5563bf14a46SMatthew Knepley   pastix->CleanUpPastix = PETSC_FALSE;
5570298fd71SBarry Smith   pastix->scat_rhs      = NULL;
5580298fd71SBarry Smith   pastix->scat_sol      = NULL;
55958c95f1bSBarry Smith   B->ops->getinfo       = MatGetInfo_External;
5603bf14a46SMatthew Knepley   B->ops->destroy       = MatDestroy_Pastix;
56158c95f1bSBarry Smith   B->data               = (void *)pastix;
5623bf14a46SMatthew Knepley   *F                    = B;
5633bf14a46SMatthew Knepley   PetscFunctionReturn(0);
5643bf14a46SMatthew Knepley }
5653bf14a46SMatthew Knepley 
566*9371c9d4SSatish Balay static PetscErrorCode MatGetFactor_mpisbaij_pastix(Mat A, MatFactorType ftype, Mat *F) {
5673bf14a46SMatthew Knepley   Mat         B;
5683bf14a46SMatthew Knepley   Mat_Pastix *pastix;
5693bf14a46SMatthew Knepley 
5703bf14a46SMatthew Knepley   PetscFunctionBegin;
5715f80ce2aSJacob Faibussowitsch   PetscCheck(ftype == MAT_FACTOR_CHOLESKY, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc SBAIJ matrices with PaStiX LU, use AIJ matrix");
57241c8de11SBarry Smith 
5733bf14a46SMatthew Knepley   /* Create the factorization matrix */
5749566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B));
5759566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N));
5769566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name));
5779566063dSJacob Faibussowitsch   PetscCall(MatSetUp(B));
5783bf14a46SMatthew Knepley 
5793bf14a46SMatthew Knepley   B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJPASTIX;
5803bf14a46SMatthew Knepley   B->ops->view                   = MatView_PaStiX;
58158c95f1bSBarry Smith   B->ops->getinfo                = MatGetInfo_PaStiX;
58258c95f1bSBarry Smith   B->ops->destroy                = MatDestroy_Pastix;
5839566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix));
5842205254eSKarl Rupp 
585d5f3da31SBarry Smith   B->factortype = MAT_FACTOR_CHOLESKY;
5863bf14a46SMatthew Knepley 
58700c67f3bSHong Zhang   /* set solvertype */
5889566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->solvertype));
5899566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype));
59000c67f3bSHong Zhang 
5919566063dSJacob Faibussowitsch   PetscCall(PetscNewLog(B, &pastix));
5922205254eSKarl Rupp 
5933bf14a46SMatthew Knepley   pastix->CleanUpPastix = PETSC_FALSE;
5940298fd71SBarry Smith   pastix->scat_rhs      = NULL;
5950298fd71SBarry Smith   pastix->scat_sol      = NULL;
59658c95f1bSBarry Smith   B->data               = (void *)pastix;
5973bf14a46SMatthew Knepley 
5983bf14a46SMatthew Knepley   *F = B;
5993bf14a46SMatthew Knepley   PetscFunctionReturn(0);
6003bf14a46SMatthew Knepley }
601f7a08781SBarry Smith 
602*9371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_Pastix(void) {
60342c9c57cSBarry Smith   PetscFunctionBegin;
6049566063dSJacob Faibussowitsch   PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATMPIAIJ, MAT_FACTOR_LU, MatGetFactor_mpiaij_pastix));
6059566063dSJacob Faibussowitsch   PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATSEQAIJ, MAT_FACTOR_LU, MatGetFactor_seqaij_pastix));
6069566063dSJacob Faibussowitsch   PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATMPISBAIJ, MAT_FACTOR_CHOLESKY, MatGetFactor_mpisbaij_pastix));
6079566063dSJacob Faibussowitsch   PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATSEQSBAIJ, MAT_FACTOR_CHOLESKY, MatGetFactor_seqsbaij_pastix));
60842c9c57cSBarry Smith   PetscFunctionReturn(0);
60942c9c57cSBarry Smith }
610