13bf14a46SMatthew Knepley /* 23bf14a46SMatthew Knepley Provides an interface to the PaStiX sparse solver 33bf14a46SMatthew Knepley */ 4c6db04a5SJed Brown #include <../src/mat/impls/aij/seq/aij.h> 5c6db04a5SJed Brown #include <../src/mat/impls/aij/mpi/mpiaij.h> 6c6db04a5SJed Brown #include <../src/mat/impls/sbaij/seq/sbaij.h> 7c6db04a5SJed Brown #include <../src/mat/impls/sbaij/mpi/mpisbaij.h> 83bf14a46SMatthew Knepley 9dbbbd53dSSatish Balay #if defined(PETSC_USE_COMPLEX) 105ec454cfSSatish Balay #define _H_COMPLEX 115ec454cfSSatish Balay #endif 125ec454cfSSatish Balay 133bf14a46SMatthew Knepley EXTERN_C_BEGIN 14c6db04a5SJed Brown #include <pastix.h> 153bf14a46SMatthew Knepley EXTERN_C_END 163bf14a46SMatthew Knepley 17519f805aSKarl Rupp #if defined(PETSC_USE_COMPLEX) 18519f805aSKarl Rupp #if defined(PETSC_USE_REAL_SINGLE) 195ec454cfSSatish Balay #define PASTIX_CALL c_pastix 205ec454cfSSatish Balay #else 215ec454cfSSatish Balay #define PASTIX_CALL z_pastix 225ec454cfSSatish Balay #endif 23d41469e0Sxavier lacoste 24d41469e0Sxavier lacoste #else /* PETSC_USE_COMPLEX */ 25d41469e0Sxavier lacoste 26519f805aSKarl Rupp #if defined(PETSC_USE_REAL_SINGLE) 275ec454cfSSatish Balay #define PASTIX_CALL s_pastix 285ec454cfSSatish Balay #else 295ec454cfSSatish Balay #define PASTIX_CALL d_pastix 305ec454cfSSatish Balay #endif 31d41469e0Sxavier lacoste 32d41469e0Sxavier lacoste #endif /* PETSC_USE_COMPLEX */ 33d41469e0Sxavier lacoste 34*dc4f8bb9SStefano Zampini #define PetscPastixCall(...) \ 35*dc4f8bb9SStefano Zampini do { \ 36*dc4f8bb9SStefano Zampini PetscCall(PetscFPTrapPush(PETSC_FP_TRAP_OFF)); \ 37*dc4f8bb9SStefano Zampini PetscStackCallExternalVoid(PetscStringize(PASTIX_CALL), PASTIX_CALL(__VA_ARGS__)); \ 38*dc4f8bb9SStefano Zampini PetscCall(PetscFPTrapPop()); \ 39*dc4f8bb9SStefano Zampini } while (0) 40*dc4f8bb9SStefano Zampini 41dbbbd53dSSatish Balay typedef PetscScalar PastixScalar; 42dbbbd53dSSatish Balay 433bf14a46SMatthew Knepley typedef struct Mat_Pastix_ { 443bf14a46SMatthew Knepley pastix_data_t *pastix_data; /* Pastix data storage structure */ 453bf14a46SMatthew Knepley MatStructure matstruc; 463bf14a46SMatthew Knepley PetscInt n; /* Number of columns in the matrix */ 473bf14a46SMatthew Knepley PetscInt *colptr; /* Index of first element of each column in row and val */ 483bf14a46SMatthew Knepley PetscInt *row; /* Row of each element of the matrix */ 493bf14a46SMatthew Knepley PetscScalar *val; /* Value of each element of the matrix */ 503bf14a46SMatthew Knepley PetscInt *perm; /* Permutation tabular */ 513bf14a46SMatthew Knepley PetscInt *invp; /* Reverse permutation tabular */ 523bf14a46SMatthew Knepley PetscScalar *rhs; /* Rhight-hand-side member */ 533bf14a46SMatthew Knepley PetscInt rhsnbr; /* Rhight-hand-side number (must be 1) */ 54baed9decSBarry Smith PetscInt iparm[IPARM_SIZE]; /* Integer parameters */ 55baed9decSBarry Smith double dparm[DPARM_SIZE]; /* Floating point parameters */ 563bf14a46SMatthew Knepley MPI_Comm pastix_comm; /* PaStiX MPI communicator */ 573bf14a46SMatthew Knepley PetscMPIInt commRank; /* MPI rank */ 583bf14a46SMatthew Knepley PetscMPIInt commSize; /* MPI communicator size */ 59ace3abfcSBarry Smith PetscBool CleanUpPastix; /* Boolean indicating if we call PaStiX clean step */ 603bf14a46SMatthew Knepley VecScatter scat_rhs; 613bf14a46SMatthew Knepley VecScatter scat_sol; 62f31ce8a6SBarry Smith Vec b_seq; 633bf14a46SMatthew Knepley } Mat_Pastix; 643bf14a46SMatthew Knepley 6509573ac7SBarry Smith extern PetscErrorCode MatDuplicate_Pastix(Mat, MatDuplicateOption, Mat *); 663bf14a46SMatthew Knepley 673bf14a46SMatthew Knepley /* 683bf14a46SMatthew Knepley convert Petsc seqaij matrix to CSC: colptr[n], row[nz], val[nz] 693bf14a46SMatthew Knepley 703bf14a46SMatthew Knepley input: 713bf14a46SMatthew Knepley A - matrix in seqaij or mpisbaij (bs=1) format 723bf14a46SMatthew Knepley valOnly - FALSE: spaces are allocated and values are set for the CSC 733bf14a46SMatthew Knepley TRUE: Only fill values 743bf14a46SMatthew Knepley output: 753bf14a46SMatthew Knepley n - Size of the matrix 763bf14a46SMatthew Knepley colptr - Index of first element of each column in row and val 773bf14a46SMatthew Knepley row - Row of each element of the matrix 783bf14a46SMatthew Knepley values - Value of each element of the matrix 793bf14a46SMatthew Knepley */ 80d71ae5a4SJacob Faibussowitsch PetscErrorCode MatConvertToCSC(Mat A, PetscBool valOnly, PetscInt *n, PetscInt **colptr, PetscInt **row, PetscScalar **values) 81d71ae5a4SJacob Faibussowitsch { 823bf14a46SMatthew Knepley Mat_SeqAIJ *aa = (Mat_SeqAIJ *)A->data; 833bf14a46SMatthew Knepley PetscInt *rowptr = aa->i; 843bf14a46SMatthew Knepley PetscInt *col = aa->j; 853bf14a46SMatthew Knepley PetscScalar *rvalues = aa->a; 863bf14a46SMatthew Knepley PetscInt m = A->rmap->N; 87745c78f7SBarry Smith PetscInt nnz; 883bf14a46SMatthew Knepley PetscInt i, j, k; 893bf14a46SMatthew Knepley PetscInt base = 1; 903bf14a46SMatthew Knepley PetscInt idx; 913bf14a46SMatthew Knepley PetscInt colidx; 923bf14a46SMatthew Knepley PetscInt *colcount; 93ace3abfcSBarry Smith PetscBool isSBAIJ; 94ace3abfcSBarry Smith PetscBool isSeqSBAIJ; 95ace3abfcSBarry Smith PetscBool isMpiSBAIJ; 96ace3abfcSBarry Smith PetscBool isSym; 973bf14a46SMatthew Knepley 983bf14a46SMatthew Knepley PetscFunctionBegin; 999566063dSJacob Faibussowitsch PetscCall(MatIsSymmetric(A, 0.0, &isSym)); 1009566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSBAIJ, &isSBAIJ)); 1019566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQSBAIJ, &isSeqSBAIJ)); 1029566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPISBAIJ, &isMpiSBAIJ)); 1033bf14a46SMatthew Knepley 104745c78f7SBarry Smith *n = A->cmap->N; 105745c78f7SBarry Smith 106745c78f7SBarry Smith /* PaStiX only needs triangular matrix if matrix is symmetric 107745c78f7SBarry Smith */ 1082205254eSKarl Rupp if (isSym && !(isSBAIJ || isSeqSBAIJ || isMpiSBAIJ)) nnz = (aa->nz - *n) / 2 + *n; 1092205254eSKarl Rupp else nnz = aa->nz; 1103bf14a46SMatthew Knepley 1113bf14a46SMatthew Knepley if (!valOnly) { 1129566063dSJacob Faibussowitsch PetscCall(PetscMalloc1((*n) + 1, colptr)); 1139566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nnz, row)); 1149566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nnz, values)); 1153bf14a46SMatthew Knepley 11641c8de11SBarry Smith if (isSBAIJ || isSeqSBAIJ || isMpiSBAIJ) { 1179566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(*colptr, rowptr, (*n) + 1)); 1182205254eSKarl Rupp for (i = 0; i < *n + 1; i++) (*colptr)[i] += base; 1199566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(*row, col, nnz)); 1202205254eSKarl Rupp for (i = 0; i < nnz; i++) (*row)[i] += base; 1219566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(*values, rvalues, nnz)); 12241c8de11SBarry Smith } else { 1239566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(*n, &colcount)); 12441c8de11SBarry Smith 125f31ce8a6SBarry Smith for (i = 0; i < m; i++) colcount[i] = 0; 1263bf14a46SMatthew Knepley /* Fill-in colptr */ 127f31ce8a6SBarry Smith for (i = 0; i < m; i++) { 128f31ce8a6SBarry Smith for (j = rowptr[i]; j < rowptr[i + 1]; j++) { 129f31ce8a6SBarry Smith if (!isSym || col[j] <= i) colcount[col[j]]++; 130f31ce8a6SBarry Smith } 131f31ce8a6SBarry Smith } 132745c78f7SBarry Smith 1333bf14a46SMatthew Knepley (*colptr)[0] = base; 1343bf14a46SMatthew Knepley for (j = 0; j < *n; j++) { 1353bf14a46SMatthew Knepley (*colptr)[j + 1] = (*colptr)[j] + colcount[j]; 136745c78f7SBarry Smith /* in next loop we fill starting from (*colptr)[colidx] - base */ 1373bf14a46SMatthew Knepley colcount[j] = -base; 1383bf14a46SMatthew Knepley } 1393bf14a46SMatthew Knepley 1403bf14a46SMatthew Knepley /* Fill-in rows and values */ 1413bf14a46SMatthew Knepley for (i = 0; i < m; i++) { 1423bf14a46SMatthew Knepley for (j = rowptr[i]; j < rowptr[i + 1]; j++) { 14341c8de11SBarry Smith if (!isSym || col[j] <= i) { 1443bf14a46SMatthew Knepley colidx = col[j]; 1453bf14a46SMatthew Knepley idx = (*colptr)[colidx] + colcount[colidx]; 1463bf14a46SMatthew Knepley (*row)[idx] = i + base; 1473bf14a46SMatthew Knepley (*values)[idx] = rvalues[j]; 1483bf14a46SMatthew Knepley colcount[colidx]++; 1493bf14a46SMatthew Knepley } 1503bf14a46SMatthew Knepley } 1513bf14a46SMatthew Knepley } 1529566063dSJacob Faibussowitsch PetscCall(PetscFree(colcount)); 153745c78f7SBarry Smith } 15441c8de11SBarry Smith } else { 155745c78f7SBarry Smith /* Fill-in only values */ 1563bf14a46SMatthew Knepley for (i = 0; i < m; i++) { 1573bf14a46SMatthew Knepley for (j = rowptr[i]; j < rowptr[i + 1]; j++) { 1583bf14a46SMatthew Knepley colidx = col[j]; 1592205254eSKarl Rupp if ((isSBAIJ || isSeqSBAIJ || isMpiSBAIJ) || !isSym || col[j] <= i) { 160745c78f7SBarry Smith /* look for the value to fill */ 161f31ce8a6SBarry Smith for (k = (*colptr)[colidx] - base; k < (*colptr)[colidx + 1] - base; k++) { 162eb1f6c34SBarry Smith if (((*row)[k] - base) == i) { 1633bf14a46SMatthew Knepley (*values)[k] = rvalues[j]; 1643bf14a46SMatthew Knepley break; 1653bf14a46SMatthew Knepley } 1663bf14a46SMatthew Knepley } 167f31ce8a6SBarry Smith /* data structure of sparse matrix has changed */ 168aed4548fSBarry Smith PetscCheck(k != (*colptr)[colidx + 1] - base, PETSC_COMM_SELF, PETSC_ERR_PLIB, "overflow on k %" PetscInt_FMT, k); 1693bf14a46SMatthew Knepley } 1703bf14a46SMatthew Knepley } 1713bf14a46SMatthew Knepley } 172745c78f7SBarry Smith } 1733ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1743bf14a46SMatthew Knepley } 1753bf14a46SMatthew Knepley 1763bf14a46SMatthew Knepley /* 1773bf14a46SMatthew Knepley Call clean step of PaStiX if lu->CleanUpPastix == true. 1783bf14a46SMatthew Knepley Free the CSC matrix. 1793bf14a46SMatthew Knepley */ 180d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDestroy_Pastix(Mat A) 181d71ae5a4SJacob Faibussowitsch { 18258c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)A->data; 183745c78f7SBarry Smith 1843bf14a46SMatthew Knepley PetscFunctionBegin; 18558c95f1bSBarry Smith if (lu->CleanUpPastix) { 1863bf14a46SMatthew Knepley /* Terminate instance, deallocate memories */ 1879566063dSJacob Faibussowitsch PetscCall(VecScatterDestroy(&lu->scat_rhs)); 1889566063dSJacob Faibussowitsch PetscCall(VecDestroy(&lu->b_seq)); 1899566063dSJacob Faibussowitsch PetscCall(VecScatterDestroy(&lu->scat_sol)); 1903bf14a46SMatthew Knepley 1913bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_CLEAN; 1923bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_CLEAN; 1933bf14a46SMatthew Knepley 194*dc4f8bb9SStefano Zampini PetscPastixCall(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 19508401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in destroy: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 1969566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->colptr)); 1979566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->row)); 1989566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->val)); 1999566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->perm)); 2009566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->invp)); 2019566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_free(&(lu->pastix_comm))); 2023bf14a46SMatthew Knepley } 2032e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatFactorGetSolverType_C", NULL)); 2049566063dSJacob Faibussowitsch PetscCall(PetscFree(A->data)); 2053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2063bf14a46SMatthew Knepley } 2073bf14a46SMatthew Knepley 2083bf14a46SMatthew Knepley /* 2093bf14a46SMatthew Knepley Gather right-hand-side. 2103bf14a46SMatthew Knepley Call for Solve step. 2113bf14a46SMatthew Knepley Scatter solution. 2123bf14a46SMatthew Knepley */ 213d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSolve_PaStiX(Mat A, Vec b, Vec x) 214d71ae5a4SJacob Faibussowitsch { 21558c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)A->data; 2163bf14a46SMatthew Knepley PetscScalar *array; 2173bf14a46SMatthew Knepley Vec x_seq; 2183bf14a46SMatthew Knepley 2193bf14a46SMatthew Knepley PetscFunctionBegin; 2203bf14a46SMatthew Knepley lu->rhsnbr = 1; 2213bf14a46SMatthew Knepley x_seq = lu->b_seq; 2223bf14a46SMatthew Knepley if (lu->commSize > 1) { 22341ffd417SStefano Zampini /* PaStiX only supports centralized rhs. Scatter b into a sequential rhs vector */ 2249566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(lu->scat_rhs, b, x_seq, INSERT_VALUES, SCATTER_FORWARD)); 2259566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(lu->scat_rhs, b, x_seq, INSERT_VALUES, SCATTER_FORWARD)); 2269566063dSJacob Faibussowitsch PetscCall(VecGetArray(x_seq, &array)); 22741c8de11SBarry Smith } else { /* size == 1 */ 2289566063dSJacob Faibussowitsch PetscCall(VecCopy(b, x)); 2299566063dSJacob Faibussowitsch PetscCall(VecGetArray(x, &array)); 2303bf14a46SMatthew Knepley } 2313bf14a46SMatthew Knepley lu->rhs = array; 2323bf14a46SMatthew Knepley if (lu->commSize == 1) { 2339566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x, &array)); 2343bf14a46SMatthew Knepley } else { 2359566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x_seq, &array)); 2363bf14a46SMatthew Knepley } 2373bf14a46SMatthew Knepley 2383bf14a46SMatthew Knepley /* solve phase */ 2393bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_SOLVE; 2403bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_REFINE; 241745c78f7SBarry Smith lu->iparm[IPARM_RHS_MAKING] = API_RHS_B; 2423bf14a46SMatthew Knepley 243*dc4f8bb9SStefano Zampini PetscPastixCall(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 24408401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in solve phase: lu->iparm[IPARM_ERROR_NUMBER] = %" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 2453bf14a46SMatthew Knepley 2463bf14a46SMatthew Knepley if (lu->commSize == 1) { 2479566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x, &(lu->rhs))); 2483bf14a46SMatthew Knepley } else { 2499566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(x_seq, &(lu->rhs))); 2503bf14a46SMatthew Knepley } 2513bf14a46SMatthew Knepley 2523bf14a46SMatthew Knepley if (lu->commSize > 1) { /* convert PaStiX centralized solution to petsc mpi x */ 2539566063dSJacob Faibussowitsch PetscCall(VecScatterBegin(lu->scat_sol, x_seq, x, INSERT_VALUES, SCATTER_FORWARD)); 2549566063dSJacob Faibussowitsch PetscCall(VecScatterEnd(lu->scat_sol, x_seq, x, INSERT_VALUES, SCATTER_FORWARD)); 2553bf14a46SMatthew Knepley } 2563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2573bf14a46SMatthew Knepley } 2583bf14a46SMatthew Knepley 2593bf14a46SMatthew Knepley /* 2603bf14a46SMatthew Knepley Numeric factorisation using PaStiX solver. 2613bf14a46SMatthew Knepley 2623bf14a46SMatthew Knepley */ 263d71ae5a4SJacob Faibussowitsch PetscErrorCode MatFactorNumeric_PaStiX(Mat F, Mat A, const MatFactorInfo *info) 264d71ae5a4SJacob Faibussowitsch { 26558c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)(F)->data; 26641c8de11SBarry Smith Mat *tseq; 267b5e56a35SBarry Smith PetscInt icntl; 268b5e56a35SBarry Smith PetscInt M = A->rmap->N; 269ace3abfcSBarry Smith PetscBool valOnly, flg, isSym; 2703bf14a46SMatthew Knepley IS is_iden; 2713bf14a46SMatthew Knepley Vec b; 2723bf14a46SMatthew Knepley IS isrow; 27351a30905SBarry Smith PetscBool isSeqAIJ, isSeqSBAIJ, isMPIAIJ; 2743bf14a46SMatthew Knepley 2753bf14a46SMatthew Knepley PetscFunctionBegin; 2769566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQAIJ, &isSeqAIJ)); 2779566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIAIJ, &isMPIAIJ)); 2789566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATSEQSBAIJ, &isSeqSBAIJ)); 2793bf14a46SMatthew Knepley if (lu->matstruc == DIFFERENT_NONZERO_PATTERN) { 2803bf14a46SMatthew Knepley (F)->ops->solve = MatSolve_PaStiX; 2813bf14a46SMatthew Knepley 2823bf14a46SMatthew Knepley /* Initialize a PASTIX instance */ 2839566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_dup(PetscObjectComm((PetscObject)A), &(lu->pastix_comm))); 2849566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(lu->pastix_comm, &lu->commRank)); 2859566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(lu->pastix_comm, &lu->commSize)); 2863bf14a46SMatthew Knepley 2873bf14a46SMatthew Knepley /* Set pastix options */ 2883bf14a46SMatthew Knepley lu->iparm[IPARM_MODIFY_PARAMETER] = API_NO; 2893bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_INIT; 2903bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_INIT; 2912205254eSKarl Rupp 2923bf14a46SMatthew Knepley lu->rhsnbr = 1; 2933bf14a46SMatthew Knepley 2943bf14a46SMatthew Knepley /* Call to set default pastix options */ 295*dc4f8bb9SStefano Zampini PetscPastixCall(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 29608401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in MatFactorNumeric: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 2973bf14a46SMatthew Knepley 29826cc229bSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)F), ((PetscObject)F)->prefix, "PaStiX Options", "Mat"); 2993bf14a46SMatthew Knepley icntl = -1; 30041c8de11SBarry Smith lu->iparm[IPARM_VERBOSE] = API_VERBOSE_NOT; 3019566063dSJacob Faibussowitsch PetscCall(PetscOptionsInt("-mat_pastix_verbose", "iparm[IPARM_VERBOSE] : level of printing (0 to 2)", "None", lu->iparm[IPARM_VERBOSE], &icntl, &flg)); 302ad540459SPierre Jolivet if ((flg && icntl >= 0) || PetscLogPrintInfo) lu->iparm[IPARM_VERBOSE] = icntl; 3033bf14a46SMatthew Knepley icntl = -1; 3049566063dSJacob Faibussowitsch PetscCall(PetscOptionsInt("-mat_pastix_threadnbr", "iparm[IPARM_THREAD_NBR] : Number of thread by MPI node", "None", lu->iparm[IPARM_THREAD_NBR], &icntl, &flg)); 305ad540459SPierre Jolivet if ((flg && icntl > 0)) lu->iparm[IPARM_THREAD_NBR] = icntl; 306d0609cedSBarry Smith PetscOptionsEnd(); 3073bf14a46SMatthew Knepley valOnly = PETSC_FALSE; 30841c8de11SBarry Smith } else { 3095d6241c8SBarry Smith if (isSeqAIJ || isMPIAIJ) { 3109566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->colptr)); 3119566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->row)); 3129566063dSJacob Faibussowitsch PetscCall(PetscFree(lu->val)); 3135d6241c8SBarry Smith valOnly = PETSC_FALSE; 3145d6241c8SBarry Smith } else valOnly = PETSC_TRUE; 3153bf14a46SMatthew Knepley } 3163bf14a46SMatthew Knepley 3173bf14a46SMatthew Knepley lu->iparm[IPARM_MATRIX_VERIFICATION] = API_YES; 3183bf14a46SMatthew Knepley 3193bf14a46SMatthew Knepley /* convert mpi A to seq mat A */ 3209566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, M, 0, 1, &isrow)); 3219566063dSJacob Faibussowitsch PetscCall(MatCreateSubMatrices(A, 1, &isrow, &isrow, MAT_INITIAL_MATRIX, &tseq)); 3229566063dSJacob Faibussowitsch PetscCall(ISDestroy(&isrow)); 3233bf14a46SMatthew Knepley 3249566063dSJacob Faibussowitsch PetscCall(MatConvertToCSC(*tseq, valOnly, &lu->n, &lu->colptr, &lu->row, &lu->val)); 3259566063dSJacob Faibussowitsch PetscCall(MatIsSymmetric(*tseq, 0.0, &isSym)); 3269566063dSJacob Faibussowitsch PetscCall(MatDestroyMatrices(1, &tseq)); 32741c8de11SBarry Smith 3285d6241c8SBarry Smith if (!lu->perm) { 3299566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(lu->n, &(lu->perm))); 3309566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(lu->n, &(lu->invp))); 3315d6241c8SBarry Smith } 3323bf14a46SMatthew Knepley 3333bf14a46SMatthew Knepley if (isSym) { 334745c78f7SBarry Smith /* On symmetric matrix, LLT */ 3353bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_YES; 33641c8de11SBarry Smith lu->iparm[IPARM_FACTORIZATION] = API_FACT_LDLT; 337f31ce8a6SBarry Smith } else { 338745c78f7SBarry Smith /* On unsymmetric matrix, LU */ 3393bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_NO; 3403bf14a46SMatthew Knepley lu->iparm[IPARM_FACTORIZATION] = API_FACT_LU; 3413bf14a46SMatthew Knepley } 3423bf14a46SMatthew Knepley 3433bf14a46SMatthew Knepley if (lu->matstruc == DIFFERENT_NONZERO_PATTERN) { 34458c95f1bSBarry Smith if (!(isSeqAIJ || isSeqSBAIJ) && !lu->b_seq) { 3453bf14a46SMatthew Knepley /* PaStiX only supports centralized rhs. Create scatter scat_rhs for repeated use in MatSolve() */ 3469566063dSJacob Faibussowitsch PetscCall(VecCreateSeq(PETSC_COMM_SELF, A->cmap->N, &lu->b_seq)); 3479566063dSJacob Faibussowitsch PetscCall(ISCreateStride(PETSC_COMM_SELF, A->cmap->N, 0, 1, &is_iden)); 3489566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A, NULL, &b)); 3499566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(b, is_iden, lu->b_seq, is_iden, &lu->scat_rhs)); 3509566063dSJacob Faibussowitsch PetscCall(VecScatterCreate(lu->b_seq, is_iden, b, is_iden, &lu->scat_sol)); 3519566063dSJacob Faibussowitsch PetscCall(ISDestroy(&is_iden)); 3529566063dSJacob Faibussowitsch PetscCall(VecDestroy(&b)); 3533bf14a46SMatthew Knepley } 3543bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_ORDERING; 3553bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_NUMFACT; 3563bf14a46SMatthew Knepley 357*dc4f8bb9SStefano Zampini PetscPastixCall(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 35808401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in analysis phase: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 35941c8de11SBarry Smith } else { 3603bf14a46SMatthew Knepley lu->iparm[IPARM_START_TASK] = API_TASK_NUMFACT; 3613bf14a46SMatthew Knepley lu->iparm[IPARM_END_TASK] = API_TASK_NUMFACT; 362*dc4f8bb9SStefano Zampini PetscPastixCall(&(lu->pastix_data), lu->pastix_comm, lu->n, lu->colptr, lu->row, (PastixScalar *)lu->val, lu->perm, lu->invp, (PastixScalar *)lu->rhs, lu->rhsnbr, lu->iparm, lu->dparm); 36308401ef6SPierre Jolivet PetscCheck(lu->iparm[IPARM_ERROR_NUMBER] == 0, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error reported by PaStiX in analysis phase: iparm(IPARM_ERROR_NUMBER)=%" PetscInt_FMT, lu->iparm[IPARM_ERROR_NUMBER]); 3643bf14a46SMatthew Knepley } 3653bf14a46SMatthew Knepley 3663bf14a46SMatthew Knepley (F)->assembled = PETSC_TRUE; 3673bf14a46SMatthew Knepley lu->matstruc = SAME_NONZERO_PATTERN; 3683bf14a46SMatthew Knepley lu->CleanUpPastix = PETSC_TRUE; 3693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3703bf14a46SMatthew Knepley } 3713bf14a46SMatthew Knepley 3723bf14a46SMatthew Knepley /* Note the Petsc r and c permutations are ignored */ 373d71ae5a4SJacob Faibussowitsch PetscErrorCode MatLUFactorSymbolic_AIJPASTIX(Mat F, Mat A, IS r, IS c, const MatFactorInfo *info) 374d71ae5a4SJacob Faibussowitsch { 37558c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)F->data; 3763bf14a46SMatthew Knepley 3773bf14a46SMatthew Knepley PetscFunctionBegin; 3783bf14a46SMatthew Knepley lu->iparm[IPARM_FACTORIZATION] = API_FACT_LU; 3793bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_YES; 3803bf14a46SMatthew Knepley lu->matstruc = DIFFERENT_NONZERO_PATTERN; 3813bf14a46SMatthew Knepley F->ops->lufactornumeric = MatFactorNumeric_PaStiX; 3823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3833bf14a46SMatthew Knepley } 3843bf14a46SMatthew Knepley 385d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCholeskyFactorSymbolic_SBAIJPASTIX(Mat F, Mat A, IS r, const MatFactorInfo *info) 386d71ae5a4SJacob Faibussowitsch { 38758c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)(F)->data; 3883bf14a46SMatthew Knepley 3893bf14a46SMatthew Knepley PetscFunctionBegin; 3903bf14a46SMatthew Knepley lu->iparm[IPARM_FACTORIZATION] = API_FACT_LLT; 3913bf14a46SMatthew Knepley lu->iparm[IPARM_SYM] = API_SYM_NO; 3923bf14a46SMatthew Knepley lu->matstruc = DIFFERENT_NONZERO_PATTERN; 3933bf14a46SMatthew Knepley (F)->ops->choleskyfactornumeric = MatFactorNumeric_PaStiX; 3943ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3953bf14a46SMatthew Knepley } 3963bf14a46SMatthew Knepley 397d71ae5a4SJacob Faibussowitsch PetscErrorCode MatView_PaStiX(Mat A, PetscViewer viewer) 398d71ae5a4SJacob Faibussowitsch { 399ace3abfcSBarry Smith PetscBool iascii; 4003bf14a46SMatthew Knepley PetscViewerFormat format; 4013bf14a46SMatthew Knepley 4023bf14a46SMatthew Knepley PetscFunctionBegin; 4039566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 4043bf14a46SMatthew Knepley if (iascii) { 4059566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 4063bf14a46SMatthew Knepley if (format == PETSC_VIEWER_ASCII_INFO) { 40758c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)A->data; 408b5e56a35SBarry Smith 4099566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, "PaStiX run parameters:\n")); 4109566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, " Matrix type : %s \n", ((lu->iparm[IPARM_SYM] == API_SYM_YES) ? "Symmetric" : "Unsymmetric"))); 4119566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, " Level of printing (0,1,2): %" PetscInt_FMT " \n", lu->iparm[IPARM_VERBOSE])); 4129566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPrintf(viewer, " Number of refinements iterations : %" PetscInt_FMT " \n", lu->iparm[IPARM_NBITER])); 4139566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF, " Error : %g \n", lu->dparm[DPARM_RELATIVE_ERROR])); 4143bf14a46SMatthew Knepley } 4153bf14a46SMatthew Knepley } 4163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4173bf14a46SMatthew Knepley } 4183bf14a46SMatthew Knepley 4193bf14a46SMatthew Knepley /*MC 4202692d6eeSBarry Smith MATSOLVERPASTIX - A solver package providing direct solvers (LU) for distributed 4213bf14a46SMatthew Knepley and sequential matrices via the external package PaStiX. 4223bf14a46SMatthew Knepley 4232ef1f0ffSBarry Smith Use `./configure` `--download-pastix` `--download-ptscotch` to have PETSc installed with PasTiX 424c2b89b5dSBarry Smith 4252ef1f0ffSBarry Smith Use `-pc_type lu` `-pc_factor_mat_solver_type pastix` to use this direct solver 4263bf14a46SMatthew Knepley 4273bf14a46SMatthew Knepley Options Database Keys: 4282ef1f0ffSBarry Smith + -mat_pastix_verbose <0,1,2> - print level of information messages from PaStiX 4292ef1f0ffSBarry Smith - -mat_pastix_threadnbr <integer> - Set the number of threads for each MPI process 4303bf14a46SMatthew Knepley 43195452b02SPatrick Sanan Notes: 43295452b02SPatrick Sanan This only works for matrices with symmetric nonzero structure, if you pass it a matrix with 4332ef1f0ffSBarry Smith nonsymmetric structure PasTiX, and hence, PETSc return with an error. 434baed9decSBarry Smith 4353bf14a46SMatthew Knepley Level: beginner 4363bf14a46SMatthew Knepley 4372ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `PCFactorSetMatSolverType()`, `MatSolverType`, `MatGetFactor()` 4383bf14a46SMatthew Knepley M*/ 4393bf14a46SMatthew Knepley 440d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetInfo_PaStiX(Mat A, MatInfoType flag, MatInfo *info) 441d71ae5a4SJacob Faibussowitsch { 44258c95f1bSBarry Smith Mat_Pastix *lu = (Mat_Pastix *)A->data; 4433bf14a46SMatthew Knepley 4443bf14a46SMatthew Knepley PetscFunctionBegin; 4453bf14a46SMatthew Knepley info->block_size = 1.0; 4463bf14a46SMatthew Knepley info->nz_allocated = lu->iparm[IPARM_NNZEROS]; 4473bf14a46SMatthew Knepley info->nz_used = lu->iparm[IPARM_NNZEROS]; 4483bf14a46SMatthew Knepley info->nz_unneeded = 0.0; 4493bf14a46SMatthew Knepley info->assemblies = 0.0; 4503bf14a46SMatthew Knepley info->mallocs = 0.0; 4513bf14a46SMatthew Knepley info->memory = 0.0; 4523bf14a46SMatthew Knepley info->fill_ratio_given = 0; 4533bf14a46SMatthew Knepley info->fill_ratio_needed = 0; 4543bf14a46SMatthew Knepley info->factor_mallocs = 0; 4553ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4563bf14a46SMatthew Knepley } 4573bf14a46SMatthew Knepley 458d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatFactorGetSolverType_pastix(Mat A, MatSolverType *type) 459d71ae5a4SJacob Faibussowitsch { 4603bf14a46SMatthew Knepley PetscFunctionBegin; 4612692d6eeSBarry Smith *type = MATSOLVERPASTIX; 4623ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4633bf14a46SMatthew Knepley } 4643bf14a46SMatthew Knepley 4653bf14a46SMatthew Knepley /* 4663bf14a46SMatthew Knepley The seq and mpi versions of this function are the same 4673bf14a46SMatthew Knepley */ 468d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetFactor_seqaij_pastix(Mat A, MatFactorType ftype, Mat *F) 469d71ae5a4SJacob Faibussowitsch { 4703bf14a46SMatthew Knepley Mat B; 4713bf14a46SMatthew Knepley Mat_Pastix *pastix; 4723bf14a46SMatthew Knepley 4733bf14a46SMatthew Knepley PetscFunctionBegin; 4745f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_LU, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc AIJ matrices with PaStiX Cholesky, use SBAIJ matrix"); 4753bf14a46SMatthew Knepley /* Create the factorization matrix */ 4769566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 4779566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 4789566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name)); 4799566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 4803bf14a46SMatthew Knepley 48166e17bc3SBarry Smith B->trivialsymbolic = PETSC_TRUE; 4823bf14a46SMatthew Knepley B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJPASTIX; 4833bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 4843bf14a46SMatthew Knepley B->ops->getinfo = MatGetInfo_PaStiX; 4852205254eSKarl Rupp 4869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix)); 4872205254eSKarl Rupp 488d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 4893bf14a46SMatthew Knepley 49000c67f3bSHong Zhang /* set solvertype */ 4919566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 4929566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype)); 49300c67f3bSHong Zhang 4944dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&pastix)); 4952205254eSKarl Rupp 4963bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 4970298fd71SBarry Smith pastix->scat_rhs = NULL; 4980298fd71SBarry Smith pastix->scat_sol = NULL; 49958c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_External; 5003bf14a46SMatthew Knepley B->ops->destroy = MatDestroy_Pastix; 50158c95f1bSBarry Smith B->data = (void *)pastix; 5023bf14a46SMatthew Knepley 5033bf14a46SMatthew Knepley *F = B; 5043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5053bf14a46SMatthew Knepley } 5063bf14a46SMatthew Knepley 507d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetFactor_mpiaij_pastix(Mat A, MatFactorType ftype, Mat *F) 508d71ae5a4SJacob Faibussowitsch { 5093bf14a46SMatthew Knepley Mat B; 5103bf14a46SMatthew Knepley Mat_Pastix *pastix; 5113bf14a46SMatthew Knepley 5123bf14a46SMatthew Knepley PetscFunctionBegin; 5135f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_LU, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc AIJ matrices with PaStiX Cholesky, use SBAIJ matrix"); 5143bf14a46SMatthew Knepley /* Create the factorization matrix */ 5159566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 5169566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 5179566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name)); 5189566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 5193bf14a46SMatthew Knepley 52066e17bc3SBarry Smith B->trivialsymbolic = PETSC_TRUE; 5213bf14a46SMatthew Knepley B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJPASTIX; 5223bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 52358c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_PaStiX; 5249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix)); 5252205254eSKarl Rupp 526d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 5273bf14a46SMatthew Knepley 52800c67f3bSHong Zhang /* set solvertype */ 5299566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 5309566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype)); 53100c67f3bSHong Zhang 5324dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&pastix)); 5332205254eSKarl Rupp 5343bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 5350298fd71SBarry Smith pastix->scat_rhs = NULL; 5360298fd71SBarry Smith pastix->scat_sol = NULL; 53758c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_External; 5383bf14a46SMatthew Knepley B->ops->destroy = MatDestroy_Pastix; 53958c95f1bSBarry Smith B->data = (void *)pastix; 5403bf14a46SMatthew Knepley 5413bf14a46SMatthew Knepley *F = B; 5423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5433bf14a46SMatthew Knepley } 5443bf14a46SMatthew Knepley 545d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetFactor_seqsbaij_pastix(Mat A, MatFactorType ftype, Mat *F) 546d71ae5a4SJacob Faibussowitsch { 5473bf14a46SMatthew Knepley Mat B; 5483bf14a46SMatthew Knepley Mat_Pastix *pastix; 5493bf14a46SMatthew Knepley 5503bf14a46SMatthew Knepley PetscFunctionBegin; 5515f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_CHOLESKY, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc SBAIJ matrices with PaStiX LU, use AIJ matrix"); 5523bf14a46SMatthew Knepley /* Create the factorization matrix */ 5539566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 5549566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 5559566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name)); 5569566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 5573bf14a46SMatthew Knepley 55866e17bc3SBarry Smith B->trivialsymbolic = PETSC_TRUE; 5593bf14a46SMatthew Knepley B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJPASTIX; 5603bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 56158c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_PaStiX; 5629566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix)); 5632205254eSKarl Rupp 564d5f3da31SBarry Smith B->factortype = MAT_FACTOR_CHOLESKY; 5653bf14a46SMatthew Knepley 56600c67f3bSHong Zhang /* set solvertype */ 5679566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 5689566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype)); 56900c67f3bSHong Zhang 5704dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&pastix)); 5712205254eSKarl Rupp 5723bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 5730298fd71SBarry Smith pastix->scat_rhs = NULL; 5740298fd71SBarry Smith pastix->scat_sol = NULL; 57558c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_External; 5763bf14a46SMatthew Knepley B->ops->destroy = MatDestroy_Pastix; 57758c95f1bSBarry Smith B->data = (void *)pastix; 5783bf14a46SMatthew Knepley *F = B; 5793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5803bf14a46SMatthew Knepley } 5813bf14a46SMatthew Knepley 582d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetFactor_mpisbaij_pastix(Mat A, MatFactorType ftype, Mat *F) 583d71ae5a4SJacob Faibussowitsch { 5843bf14a46SMatthew Knepley Mat B; 5853bf14a46SMatthew Knepley Mat_Pastix *pastix; 5863bf14a46SMatthew Knepley 5873bf14a46SMatthew Knepley PetscFunctionBegin; 5885f80ce2aSJacob Faibussowitsch PetscCheck(ftype == MAT_FACTOR_CHOLESKY, PETSC_COMM_SELF, PETSC_ERR_SUP, "Cannot use PETSc SBAIJ matrices with PaStiX LU, use AIJ matrix"); 58941c8de11SBarry Smith 5903bf14a46SMatthew Knepley /* Create the factorization matrix */ 5919566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 5929566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 5939566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy("pastix", &((PetscObject)B)->type_name)); 5949566063dSJacob Faibussowitsch PetscCall(MatSetUp(B)); 5953bf14a46SMatthew Knepley 5963bf14a46SMatthew Knepley B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SBAIJPASTIX; 5973bf14a46SMatthew Knepley B->ops->view = MatView_PaStiX; 59858c95f1bSBarry Smith B->ops->getinfo = MatGetInfo_PaStiX; 59958c95f1bSBarry Smith B->ops->destroy = MatDestroy_Pastix; 6009566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatFactorGetSolverType_C", MatFactorGetSolverType_pastix)); 6012205254eSKarl Rupp 602d5f3da31SBarry Smith B->factortype = MAT_FACTOR_CHOLESKY; 6033bf14a46SMatthew Knepley 60400c67f3bSHong Zhang /* set solvertype */ 6059566063dSJacob Faibussowitsch PetscCall(PetscFree(B->solvertype)); 6069566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATSOLVERPASTIX, &B->solvertype)); 60700c67f3bSHong Zhang 6084dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&pastix)); 6092205254eSKarl Rupp 6103bf14a46SMatthew Knepley pastix->CleanUpPastix = PETSC_FALSE; 6110298fd71SBarry Smith pastix->scat_rhs = NULL; 6120298fd71SBarry Smith pastix->scat_sol = NULL; 61358c95f1bSBarry Smith B->data = (void *)pastix; 6143bf14a46SMatthew Knepley 6153bf14a46SMatthew Knepley *F = B; 6163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6173bf14a46SMatthew Knepley } 618f7a08781SBarry Smith 619d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_Pastix(void) 620d71ae5a4SJacob Faibussowitsch { 62142c9c57cSBarry Smith PetscFunctionBegin; 6229566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATMPIAIJ, MAT_FACTOR_LU, MatGetFactor_mpiaij_pastix)); 6239566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATSEQAIJ, MAT_FACTOR_LU, MatGetFactor_seqaij_pastix)); 6249566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATMPISBAIJ, MAT_FACTOR_CHOLESKY, MatGetFactor_mpisbaij_pastix)); 6259566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERPASTIX, MATSEQSBAIJ, MAT_FACTOR_CHOLESKY, MatGetFactor_seqsbaij_pastix)); 6263ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 62742c9c57cSBarry Smith } 628