14c1414c8SBarry Smith /* 24c1414c8SBarry Smith This file provides high performance routines for the Inode format (compressed sparse row) 34c1414c8SBarry Smith by taking advantage of rows with identical nonzero structure (I-nodes). 44c1414c8SBarry Smith */ 5c6db04a5SJed Brown #include <../src/mat/impls/aij/seq/aij.h> 6fb56d528SJed Brown #if defined(PETSC_HAVE_XMMINTRIN_H) 7fb56d528SJed Brown #include <xmmintrin.h> 8fb56d528SJed Brown #endif 94c1414c8SBarry Smith 10d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatCreateColInode_Private(Mat A, PetscInt *size, PetscInt **ns) 11d71ae5a4SJacob Faibussowitsch { 124c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 134c1414c8SBarry Smith PetscInt i, count, m, n, min_mn, *ns_row, *ns_col; 144c1414c8SBarry Smith 154c1414c8SBarry Smith PetscFunctionBegin; 16d0f46423SBarry Smith n = A->cmap->n; 17d0f46423SBarry Smith m = A->rmap->n; 184d12350bSJunchao Zhang PetscCheck(a->inode.size_csr, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 194d12350bSJunchao Zhang ns_row = a->inode.size_csr; 204c1414c8SBarry Smith 214c1414c8SBarry Smith min_mn = (m < n) ? m : n; 224c1414c8SBarry Smith if (!ns) { 234d12350bSJunchao Zhang for (count = 0, i = 0; count < min_mn; count += (ns_row[i + 1] - ns_row[i]), i++); 24fbccb6d4SPierre Jolivet for (; count + 1 < n; count++, i++); 25ad540459SPierre Jolivet if (count < n) i++; 264c1414c8SBarry Smith *size = i; 273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 284c1414c8SBarry Smith } 299566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n + 1, &ns_col)); 304d12350bSJunchao Zhang ns_col[0] = 0; 314c1414c8SBarry Smith 324c1414c8SBarry Smith /* Use the same row structure wherever feasible. */ 334d12350bSJunchao Zhang for (count = 0, i = 0; count < min_mn; count += (ns_row[i + 1] - ns_row[i]), i++) ns_col[i + 1] = ns_row[i + 1]; 344c1414c8SBarry Smith 354c1414c8SBarry Smith /* if m < n; pad up the remainder with inode_limit */ 364d12350bSJunchao Zhang for (; count + 1 < n; count++, i++) ns_col[i + 1] = ns_col[i] + 1; 37aaa8cc7dSPierre Jolivet /* The last node is the odd ball. pad it up with the remaining rows; */ 384c1414c8SBarry Smith if (count < n) { 394d12350bSJunchao Zhang ns_col[i + 1] = ns_col[i] + (n - count); 404c1414c8SBarry Smith i++; 414c1414c8SBarry Smith } else if (count > n) { 424c1414c8SBarry Smith /* Adjust for the over estimation */ 434d12350bSJunchao Zhang ns_col[i] += n - count; 444c1414c8SBarry Smith } 454c1414c8SBarry Smith *size = i; 464c1414c8SBarry Smith *ns = ns_col; 473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 484c1414c8SBarry Smith } 494c1414c8SBarry Smith 504c1414c8SBarry Smith /* 514c1414c8SBarry Smith This builds symmetric version of nonzero structure, 524c1414c8SBarry Smith */ 53d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetRowIJ_SeqAIJ_Inode_Symmetric(Mat A, const PetscInt *iia[], const PetscInt *jja[], PetscInt ishift, PetscInt oshift) 54d71ae5a4SJacob Faibussowitsch { 554c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 568758e1faSBarry Smith PetscInt *work, *ia, *ja, nz, nslim_row, nslim_col, m, row, col, n; 574d12350bSJunchao Zhang PetscInt *tns, *tvc, *ns_row = a->inode.size_csr, *ns_col, nsz, i1, i2; 588758e1faSBarry Smith const PetscInt *j, *jmax, *ai = a->i, *aj = a->j; 594c1414c8SBarry Smith 604c1414c8SBarry Smith PetscFunctionBegin; 614c1414c8SBarry Smith nslim_row = a->inode.node_count; 62d0f46423SBarry Smith m = A->rmap->n; 63d0f46423SBarry Smith n = A->cmap->n; 6408401ef6SPierre Jolivet PetscCheck(m == n, PETSC_COMM_SELF, PETSC_ERR_SUP, "MatGetRowIJ_SeqAIJ_Inode_Symmetric: Matrix should be square"); 654d12350bSJunchao Zhang PetscCheck(a->inode.size_csr, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 664c1414c8SBarry Smith 674c1414c8SBarry Smith /* Use the row_inode as column_inode */ 684c1414c8SBarry Smith nslim_col = nslim_row; 694c1414c8SBarry Smith ns_col = ns_row; 704c1414c8SBarry Smith 7135cb6cd3SPierre Jolivet /* allocate space for reformatted inode structure */ 729566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(nslim_col + 1, &tns, n + 1, &tvc)); 734d12350bSJunchao Zhang for (i1 = 0, tns[0] = 0; i1 < nslim_col; ++i1) tns[i1 + 1] = tns[i1] + (ns_row[i1 + 1] - ns_row[i1]); 744c1414c8SBarry Smith 754c1414c8SBarry Smith for (i1 = 0, col = 0; i1 < nslim_col; ++i1) { 764d12350bSJunchao Zhang nsz = ns_col[i1 + 1] - ns_col[i1]; 772205254eSKarl Rupp for (i2 = 0; i2 < nsz; ++i2, ++col) tvc[col] = i1; 784c1414c8SBarry Smith } 794c1414c8SBarry Smith /* allocate space for row pointers */ 809566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nslim_row + 1, &ia)); 814c1414c8SBarry Smith *iia = ia; 829566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nslim_row + 1, &work)); 834c1414c8SBarry Smith 844c1414c8SBarry Smith /* determine the number of columns in each row */ 854c1414c8SBarry Smith ia[0] = oshift; 864d12350bSJunchao Zhang for (i1 = 0; i1 < nslim_row; i1++) { 874d12350bSJunchao Zhang row = ns_row[i1]; 884c1414c8SBarry Smith j = aj + ai[row] + ishift; 894c1414c8SBarry Smith jmax = aj + ai[row + 1] + ishift; 9083fed2edSSatish Balay if (j == jmax) continue; /* empty row */ 914c1414c8SBarry Smith col = *j++ + ishift; 924c1414c8SBarry Smith i2 = tvc[col]; 936aad120cSJose E. Roman while (i2 < i1 && j < jmax) { /* 1.[-xx-d-xx--] 2.[-xx-------],off-diagonal elements */ 944c1414c8SBarry Smith ia[i1 + 1]++; 954c1414c8SBarry Smith ia[i2 + 1]++; 964c1414c8SBarry Smith i2++; /* Start col of next node */ 9790d2dec7SBarry Smith while ((j < jmax) && ((col = *j + ishift) < tns[i2])) ++j; 984c1414c8SBarry Smith i2 = tvc[col]; 994c1414c8SBarry Smith } 1004c1414c8SBarry Smith if (i2 == i1) ia[i2 + 1]++; /* now the diagonal element */ 1014c1414c8SBarry Smith } 1024c1414c8SBarry Smith 1034c1414c8SBarry Smith /* shift ia[i] to point to next row */ 1044c1414c8SBarry Smith for (i1 = 1; i1 < nslim_row + 1; i1++) { 1054c1414c8SBarry Smith row = ia[i1 - 1]; 1064c1414c8SBarry Smith ia[i1] += row; 1074c1414c8SBarry Smith work[i1 - 1] = row - oshift; 1084c1414c8SBarry Smith } 1094c1414c8SBarry Smith 1104c1414c8SBarry Smith /* allocate space for column pointers */ 1114c1414c8SBarry Smith nz = ia[nslim_row] + (!ishift); 1129566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nz, &ja)); 1134c1414c8SBarry Smith *jja = ja; 1144c1414c8SBarry Smith 1154c1414c8SBarry Smith /* loop over lower triangular part putting into ja */ 1164d12350bSJunchao Zhang for (i1 = 0; i1 < nslim_row; i1++) { 1174d12350bSJunchao Zhang row = ns_row[i1]; 1184c1414c8SBarry Smith j = aj + ai[row] + ishift; 1194c1414c8SBarry Smith jmax = aj + ai[row + 1] + ishift; 12083fed2edSSatish Balay if (j == jmax) continue; /* empty row */ 1214c1414c8SBarry Smith col = *j++ + ishift; 1224c1414c8SBarry Smith i2 = tvc[col]; 1234c1414c8SBarry Smith while (i2 < i1 && j < jmax) { 1244c1414c8SBarry Smith ja[work[i2]++] = i1 + oshift; 1254c1414c8SBarry Smith ja[work[i1]++] = i2 + oshift; 1264c1414c8SBarry Smith ++i2; 12790d2dec7SBarry Smith while ((j < jmax) && ((col = *j + ishift) < tns[i2])) ++j; /* Skip rest col indices in this node */ 1284c1414c8SBarry Smith i2 = tvc[col]; 1294c1414c8SBarry Smith } 1304c1414c8SBarry Smith if (i2 == i1) ja[work[i1]++] = i2 + oshift; 1314c1414c8SBarry Smith } 1329566063dSJacob Faibussowitsch PetscCall(PetscFree(work)); 1339566063dSJacob Faibussowitsch PetscCall(PetscFree2(tns, tvc)); 1343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1354c1414c8SBarry Smith } 1364c1414c8SBarry Smith 1374c1414c8SBarry Smith /* 1384c1414c8SBarry Smith This builds nonsymmetric version of nonzero structure, 1394c1414c8SBarry Smith */ 140d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetRowIJ_SeqAIJ_Inode_Nonsymmetric(Mat A, const PetscInt *iia[], const PetscInt *jja[], PetscInt ishift, PetscInt oshift) 141d71ae5a4SJacob Faibussowitsch { 1424c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 1438758e1faSBarry Smith PetscInt *work, *ia, *ja, nz, nslim_row, n, row, col, *ns_col, nslim_col; 1448758e1faSBarry Smith PetscInt *tns, *tvc, nsz, i1, i2; 1454d12350bSJunchao Zhang const PetscInt *j, *ai = a->i, *aj = a->j, *ns_row = a->inode.size_csr; 1464c1414c8SBarry Smith 1474c1414c8SBarry Smith PetscFunctionBegin; 1484d12350bSJunchao Zhang PetscCheck(a->inode.size_csr, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 1494c1414c8SBarry Smith nslim_row = a->inode.node_count; 150d0f46423SBarry Smith n = A->cmap->n; 1514c1414c8SBarry Smith 1524c1414c8SBarry Smith /* Create The column_inode for this matrix */ 1539566063dSJacob Faibussowitsch PetscCall(MatCreateColInode_Private(A, &nslim_col, &ns_col)); 1544c1414c8SBarry Smith 15535cb6cd3SPierre Jolivet /* allocate space for reformatted column_inode structure */ 1569566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(nslim_col + 1, &tns, n + 1, &tvc)); 1574d12350bSJunchao Zhang for (i1 = 0, tns[0] = 0; i1 < nslim_col; ++i1) tns[i1 + 1] = tns[i1] + (ns_col[i1 + 1] - ns_col[i1]); 1584c1414c8SBarry Smith 1594c1414c8SBarry Smith for (i1 = 0, col = 0; i1 < nslim_col; ++i1) { 1604d12350bSJunchao Zhang nsz = ns_col[i1 + 1] - ns_col[i1]; 1612205254eSKarl Rupp for (i2 = 0; i2 < nsz; ++i2, ++col) tvc[col] = i1; 1624c1414c8SBarry Smith } 1634c1414c8SBarry Smith /* allocate space for row pointers */ 1649566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nslim_row + 1, &ia)); 1654c1414c8SBarry Smith *iia = ia; 1669566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nslim_row + 1, &work)); 1674c1414c8SBarry Smith 1684c1414c8SBarry Smith /* determine the number of columns in each row */ 1694c1414c8SBarry Smith ia[0] = oshift; 1704d12350bSJunchao Zhang for (i1 = 0; i1 < nslim_row; i1++) { 1714d12350bSJunchao Zhang row = ns_row[i1]; 1724c1414c8SBarry Smith j = aj + ai[row] + ishift; 17383fed2edSSatish Balay nz = ai[row + 1] - ai[row]; 17483fed2edSSatish Balay if (!nz) continue; /* empty row */ 1754c1414c8SBarry Smith col = *j++ + ishift; 1764c1414c8SBarry Smith i2 = tvc[col]; 1776aad120cSJose E. Roman while (nz-- > 0) { /* off-diagonal elements */ 1784c1414c8SBarry Smith ia[i1 + 1]++; 1794c1414c8SBarry Smith i2++; /* Start col of next node */ 180a8e3a797SJed Brown while (nz > 0 && ((col = *j++ + ishift) < tns[i2])) nz--; 1814c1414c8SBarry Smith if (nz > 0) i2 = tvc[col]; 1824c1414c8SBarry Smith } 1834c1414c8SBarry Smith } 1844c1414c8SBarry Smith 1854c1414c8SBarry Smith /* shift ia[i] to point to next row */ 1864c1414c8SBarry Smith for (i1 = 1; i1 < nslim_row + 1; i1++) { 1874c1414c8SBarry Smith row = ia[i1 - 1]; 1884c1414c8SBarry Smith ia[i1] += row; 1894c1414c8SBarry Smith work[i1 - 1] = row - oshift; 1904c1414c8SBarry Smith } 1914c1414c8SBarry Smith 1924c1414c8SBarry Smith /* allocate space for column pointers */ 1934c1414c8SBarry Smith nz = ia[nslim_row] + (!ishift); 1949566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nz, &ja)); 1954c1414c8SBarry Smith *jja = ja; 1964c1414c8SBarry Smith 1974c1414c8SBarry Smith /* loop over matrix putting into ja */ 1984d12350bSJunchao Zhang for (i1 = 0; i1 < nslim_row; i1++) { 1994d12350bSJunchao Zhang row = ns_row[i1]; 2004c1414c8SBarry Smith j = aj + ai[row] + ishift; 20183fed2edSSatish Balay nz = ai[row + 1] - ai[row]; 20283fed2edSSatish Balay if (!nz) continue; /* empty row */ 2034c1414c8SBarry Smith col = *j++ + ishift; 2044c1414c8SBarry Smith i2 = tvc[col]; 2054c1414c8SBarry Smith while (nz-- > 0) { 2064c1414c8SBarry Smith ja[work[i1]++] = i2 + oshift; 2074c1414c8SBarry Smith ++i2; 208a8e3a797SJed Brown while (nz > 0 && ((col = *j++ + ishift) < tns[i2])) nz--; 2094c1414c8SBarry Smith if (nz > 0) i2 = tvc[col]; 2104c1414c8SBarry Smith } 2114c1414c8SBarry Smith } 2129566063dSJacob Faibussowitsch PetscCall(PetscFree(ns_col)); 2139566063dSJacob Faibussowitsch PetscCall(PetscFree(work)); 2149566063dSJacob Faibussowitsch PetscCall(PetscFree2(tns, tvc)); 2153ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2164c1414c8SBarry Smith } 2174c1414c8SBarry Smith 218d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetRowIJ_SeqAIJ_Inode(Mat A, PetscInt oshift, PetscBool symmetric, PetscBool blockcompressed, PetscInt *n, const PetscInt *ia[], const PetscInt *ja[], PetscBool *done) 219d71ae5a4SJacob Faibussowitsch { 2204c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 2214c1414c8SBarry Smith 2224c1414c8SBarry Smith PetscFunctionBegin; 22350ba90b4SBarry Smith if (n) *n = a->inode.node_count; 2243ba16761SJacob Faibussowitsch if (!ia) PetscFunctionReturn(PETSC_SUCCESS); 2258f7157efSSatish Balay if (!blockcompressed) { 2269566063dSJacob Faibussowitsch PetscCall(MatGetRowIJ_SeqAIJ(A, oshift, symmetric, blockcompressed, n, ia, ja, done)); 2278f7157efSSatish Balay } else if (symmetric) { 2289566063dSJacob Faibussowitsch PetscCall(MatGetRowIJ_SeqAIJ_Inode_Symmetric(A, ia, ja, 0, oshift)); 2294c1414c8SBarry Smith } else { 2309566063dSJacob Faibussowitsch PetscCall(MatGetRowIJ_SeqAIJ_Inode_Nonsymmetric(A, ia, ja, 0, oshift)); 2314c1414c8SBarry Smith } 2323ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2334c1414c8SBarry Smith } 2344c1414c8SBarry Smith 235d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatRestoreRowIJ_SeqAIJ_Inode(Mat A, PetscInt oshift, PetscBool symmetric, PetscBool blockcompressed, PetscInt *n, const PetscInt *ia[], const PetscInt *ja[], PetscBool *done) 236d71ae5a4SJacob Faibussowitsch { 2374c1414c8SBarry Smith PetscFunctionBegin; 2383ba16761SJacob Faibussowitsch if (!ia) PetscFunctionReturn(PETSC_SUCCESS); 2398f7157efSSatish Balay 2408f7157efSSatish Balay if (!blockcompressed) { 2419566063dSJacob Faibussowitsch PetscCall(MatRestoreRowIJ_SeqAIJ(A, oshift, symmetric, blockcompressed, n, ia, ja, done)); 2428f7157efSSatish Balay } else { 2439566063dSJacob Faibussowitsch PetscCall(PetscFree(*ia)); 2449566063dSJacob Faibussowitsch PetscCall(PetscFree(*ja)); 2458f7157efSSatish Balay } 2463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2474c1414c8SBarry Smith } 2484c1414c8SBarry Smith 249d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetColumnIJ_SeqAIJ_Inode_Nonsymmetric(Mat A, const PetscInt *iia[], const PetscInt *jja[], PetscInt ishift, PetscInt oshift) 250d71ae5a4SJacob Faibussowitsch { 2514c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 2524c1414c8SBarry Smith PetscInt *work, *ia, *ja, *j, nz, nslim_row, n, row, col, *ns_col, nslim_col; 2534d12350bSJunchao Zhang PetscInt *tns, *tvc, *ns_row = a->inode.size_csr, nsz, i1, i2, *ai = a->i, *aj = a->j; 2544c1414c8SBarry Smith 2554c1414c8SBarry Smith PetscFunctionBegin; 2564d12350bSJunchao Zhang PetscCheck(a->inode.size_csr, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 2574c1414c8SBarry Smith nslim_row = a->inode.node_count; 258d0f46423SBarry Smith n = A->cmap->n; 2594c1414c8SBarry Smith 2604c1414c8SBarry Smith /* Create The column_inode for this matrix */ 2619566063dSJacob Faibussowitsch PetscCall(MatCreateColInode_Private(A, &nslim_col, &ns_col)); 2624c1414c8SBarry Smith 26335cb6cd3SPierre Jolivet /* allocate space for reformatted column_inode structure */ 2649566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(nslim_col + 1, &tns, n + 1, &tvc)); 2654d12350bSJunchao Zhang for (i1 = 0, tns[0] = 0; i1 < nslim_col; ++i1) tns[i1 + 1] = tns[i1] + (ns_col[i1 + 1] - ns_col[i1]); 2664c1414c8SBarry Smith 2674c1414c8SBarry Smith for (i1 = 0, col = 0; i1 < nslim_col; ++i1) { 2684d12350bSJunchao Zhang nsz = ns_col[i1 + 1] - ns_col[i1]; 2692205254eSKarl Rupp for (i2 = 0; i2 < nsz; ++i2, ++col) tvc[col] = i1; 2704c1414c8SBarry Smith } 2714c1414c8SBarry Smith /* allocate space for column pointers */ 2729566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nslim_col + 1, &ia)); 2734c1414c8SBarry Smith *iia = ia; 2749566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nslim_col + 1, &work)); 2754c1414c8SBarry Smith 2764c1414c8SBarry Smith /* determine the number of columns in each row */ 2774c1414c8SBarry Smith ia[0] = oshift; 2784d12350bSJunchao Zhang for (i1 = 0; i1 < nslim_row; i1++) { 2794d12350bSJunchao Zhang row = ns_row[i1]; 2804c1414c8SBarry Smith j = aj + ai[row] + ishift; 2814c1414c8SBarry Smith col = *j++ + ishift; 2824c1414c8SBarry Smith i2 = tvc[col]; 2834c1414c8SBarry Smith nz = ai[row + 1] - ai[row]; 2846aad120cSJose E. Roman while (nz-- > 0) { /* off-diagonal elements */ 2854c1414c8SBarry Smith /* ia[i1+1]++; */ 2864c1414c8SBarry Smith ia[i2 + 1]++; 2874c1414c8SBarry Smith i2++; 288a8e3a797SJed Brown while (nz > 0 && ((col = *j++ + ishift) < tns[i2])) nz--; 2894c1414c8SBarry Smith if (nz > 0) i2 = tvc[col]; 2904c1414c8SBarry Smith } 2914c1414c8SBarry Smith } 2924c1414c8SBarry Smith 2934c1414c8SBarry Smith /* shift ia[i] to point to next col */ 2944c1414c8SBarry Smith for (i1 = 1; i1 < nslim_col + 1; i1++) { 2954c1414c8SBarry Smith col = ia[i1 - 1]; 2964c1414c8SBarry Smith ia[i1] += col; 2974c1414c8SBarry Smith work[i1 - 1] = col - oshift; 2984c1414c8SBarry Smith } 2994c1414c8SBarry Smith 3004c1414c8SBarry Smith /* allocate space for column pointers */ 3014c1414c8SBarry Smith nz = ia[nslim_col] + (!ishift); 3029566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nz, &ja)); 3034c1414c8SBarry Smith *jja = ja; 3044c1414c8SBarry Smith 3054c1414c8SBarry Smith /* loop over matrix putting into ja */ 3064d12350bSJunchao Zhang for (i1 = 0; i1 < nslim_row; i1++) { 3074d12350bSJunchao Zhang row = ns_row[i1]; 3084c1414c8SBarry Smith j = aj + ai[row] + ishift; 3094c1414c8SBarry Smith col = *j++ + ishift; 3104c1414c8SBarry Smith i2 = tvc[col]; 3114c1414c8SBarry Smith nz = ai[row + 1] - ai[row]; 3124c1414c8SBarry Smith while (nz-- > 0) { 3134c1414c8SBarry Smith /* ja[work[i1]++] = i2 + oshift; */ 3144c1414c8SBarry Smith ja[work[i2]++] = i1 + oshift; 3154c1414c8SBarry Smith i2++; 316a8e3a797SJed Brown while (nz > 0 && ((col = *j++ + ishift) < tns[i2])) nz--; 3174c1414c8SBarry Smith if (nz > 0) i2 = tvc[col]; 3184c1414c8SBarry Smith } 3194c1414c8SBarry Smith } 3209566063dSJacob Faibussowitsch PetscCall(PetscFree(ns_col)); 3219566063dSJacob Faibussowitsch PetscCall(PetscFree(work)); 3229566063dSJacob Faibussowitsch PetscCall(PetscFree2(tns, tvc)); 3233ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3244c1414c8SBarry Smith } 3254c1414c8SBarry Smith 326d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetColumnIJ_SeqAIJ_Inode(Mat A, PetscInt oshift, PetscBool symmetric, PetscBool blockcompressed, PetscInt *n, const PetscInt *ia[], const PetscInt *ja[], PetscBool *done) 327d71ae5a4SJacob Faibussowitsch { 3284c1414c8SBarry Smith PetscFunctionBegin; 3299566063dSJacob Faibussowitsch PetscCall(MatCreateColInode_Private(A, n, NULL)); 3303ba16761SJacob Faibussowitsch if (!ia) PetscFunctionReturn(PETSC_SUCCESS); 3314c1414c8SBarry Smith 3328f7157efSSatish Balay if (!blockcompressed) { 3339566063dSJacob Faibussowitsch PetscCall(MatGetColumnIJ_SeqAIJ(A, oshift, symmetric, blockcompressed, n, ia, ja, done)); 3348f7157efSSatish Balay } else if (symmetric) { 335a5b23f4aSJose E. Roman /* Since the indices are symmetric it doesn't matter */ 3369566063dSJacob Faibussowitsch PetscCall(MatGetRowIJ_SeqAIJ_Inode_Symmetric(A, ia, ja, 0, oshift)); 3374c1414c8SBarry Smith } else { 3389566063dSJacob Faibussowitsch PetscCall(MatGetColumnIJ_SeqAIJ_Inode_Nonsymmetric(A, ia, ja, 0, oshift)); 3394c1414c8SBarry Smith } 3403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3414c1414c8SBarry Smith } 3424c1414c8SBarry Smith 343d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatRestoreColumnIJ_SeqAIJ_Inode(Mat A, PetscInt oshift, PetscBool symmetric, PetscBool blockcompressed, PetscInt *n, const PetscInt *ia[], const PetscInt *ja[], PetscBool *done) 344d71ae5a4SJacob Faibussowitsch { 3454c1414c8SBarry Smith PetscFunctionBegin; 3463ba16761SJacob Faibussowitsch if (!ia) PetscFunctionReturn(PETSC_SUCCESS); 3478f7157efSSatish Balay if (!blockcompressed) { 3489566063dSJacob Faibussowitsch PetscCall(MatRestoreColumnIJ_SeqAIJ(A, oshift, symmetric, blockcompressed, n, ia, ja, done)); 3498f7157efSSatish Balay } else { 3509566063dSJacob Faibussowitsch PetscCall(PetscFree(*ia)); 3519566063dSJacob Faibussowitsch PetscCall(PetscFree(*ja)); 3528f7157efSSatish Balay } 3533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3544c1414c8SBarry Smith } 3554c1414c8SBarry Smith 356d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMult_SeqAIJ_Inode(Mat A, Vec xx, Vec yy) 357d71ae5a4SJacob Faibussowitsch { 3584c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 359d9fead3dSBarry Smith PetscScalar *y; 360dd6ea824SBarry Smith const PetscScalar *x; 361*708a0e70SJunchao Zhang PetscInt row, node_max, nonzerorow = 0; 362*708a0e70SJunchao Zhang PetscInt *ns; 3634c1414c8SBarry Smith 3644c1414c8SBarry Smith PetscFunctionBegin; 3654d12350bSJunchao Zhang PetscCheck(a->inode.size_csr, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 3664c1414c8SBarry Smith node_max = a->inode.node_count; 3674d12350bSJunchao Zhang ns = a->inode.size_csr; /* Node Size array */ 3689566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(xx, &x)); 3699566063dSJacob Faibussowitsch PetscCall(VecGetArray(yy, &y)); 3704c1414c8SBarry Smith 371*708a0e70SJunchao Zhang PetscPragmaUseOMPKernels(parallel for private(row) reduction(+:nonzerorow)) 372*708a0e70SJunchao Zhang for (PetscInt i = 0; i < node_max; ++i) { 373*708a0e70SJunchao Zhang PetscInt i1, i2, nsz, n, sz; 374*708a0e70SJunchao Zhang const MatScalar *v1, *v2, *v3, *v4, *v5; 375*708a0e70SJunchao Zhang PetscScalar sum1, sum2, sum3, sum4, sum5, tmp0, tmp1; 376*708a0e70SJunchao Zhang const PetscInt *idx; 377*708a0e70SJunchao Zhang 378*708a0e70SJunchao Zhang #if defined(PETSC_HAVE_PRAGMA_DISJOINT) 379*708a0e70SJunchao Zhang #pragma disjoint(*x, *y, *v1, *v2, *v3, *v4, *v5) 380*708a0e70SJunchao Zhang #endif 381*708a0e70SJunchao Zhang row = ns[i]; 3824d12350bSJunchao Zhang nsz = ns[i + 1] - ns[i]; 383*708a0e70SJunchao Zhang n = a->i[row + 1] - a->i[row]; 38498c9bda7SSatish Balay nonzerorow += (n > 0) * nsz; 385*708a0e70SJunchao Zhang 386*708a0e70SJunchao Zhang idx = &a->j[a->i[row]]; 387*708a0e70SJunchao Zhang v1 = &a->a[a->i[row]]; 38850d8bf02SJed Brown PetscPrefetchBlock(idx + nsz * n, n, 0, PETSC_PREFETCH_HINT_NTA); /* Prefetch the indices for the block row after the current one */ 38950d8bf02SJed Brown PetscPrefetchBlock(v1 + nsz * n, nsz * n, 0, PETSC_PREFETCH_HINT_NTA); /* Prefetch the values for the block row after the current one */ 3904c1414c8SBarry Smith sz = n; /* No of non zeros in this row */ 3914c1414c8SBarry Smith /* Switch on the size of Node */ 3924c1414c8SBarry Smith switch (nsz) { /* Each loop in 'case' is unrolled */ 3934c1414c8SBarry Smith case 1: 39475567043SBarry Smith sum1 = 0.; 3954c1414c8SBarry Smith 3964c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 3974c1414c8SBarry Smith i1 = idx[0]; /* The instructions are ordered to */ 3984c1414c8SBarry Smith i2 = idx[1]; /* make the compiler's job easy */ 3994c1414c8SBarry Smith idx += 2; 4004c1414c8SBarry Smith tmp0 = x[i1]; 4014c1414c8SBarry Smith tmp1 = x[i2]; 4029371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 4039371c9d4SSatish Balay v1 += 2; 4044c1414c8SBarry Smith } 4054c1414c8SBarry Smith 4064c1414c8SBarry Smith if (n == sz - 1) { /* Take care of the last nonzero */ 4074c1414c8SBarry Smith tmp0 = x[*idx++]; 4084c1414c8SBarry Smith sum1 += *v1++ * tmp0; 4094c1414c8SBarry Smith } 4104c1414c8SBarry Smith y[row++] = sum1; 4114c1414c8SBarry Smith break; 4124c1414c8SBarry Smith case 2: 41375567043SBarry Smith sum1 = 0.; 41475567043SBarry Smith sum2 = 0.; 4154c1414c8SBarry Smith v2 = v1 + n; 4164c1414c8SBarry Smith 4174c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 4184c1414c8SBarry Smith i1 = idx[0]; 4194c1414c8SBarry Smith i2 = idx[1]; 4204c1414c8SBarry Smith idx += 2; 4214c1414c8SBarry Smith tmp0 = x[i1]; 4224c1414c8SBarry Smith tmp1 = x[i2]; 4239371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 4249371c9d4SSatish Balay v1 += 2; 4259371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 4269371c9d4SSatish Balay v2 += 2; 4274c1414c8SBarry Smith } 4284c1414c8SBarry Smith if (n == sz - 1) { 4294c1414c8SBarry Smith tmp0 = x[*idx++]; 4304c1414c8SBarry Smith sum1 += *v1++ * tmp0; 4314c1414c8SBarry Smith sum2 += *v2++ * tmp0; 4324c1414c8SBarry Smith } 4334c1414c8SBarry Smith y[row++] = sum1; 4344c1414c8SBarry Smith y[row++] = sum2; 4354c1414c8SBarry Smith v1 = v2; /* Since the next block to be processed starts there*/ 4364c1414c8SBarry Smith idx += sz; 4374c1414c8SBarry Smith break; 4384c1414c8SBarry Smith case 3: 43975567043SBarry Smith sum1 = 0.; 44075567043SBarry Smith sum2 = 0.; 44175567043SBarry Smith sum3 = 0.; 4424c1414c8SBarry Smith v2 = v1 + n; 4434c1414c8SBarry Smith v3 = v2 + n; 4444c1414c8SBarry Smith 4454c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 4464c1414c8SBarry Smith i1 = idx[0]; 4474c1414c8SBarry Smith i2 = idx[1]; 4484c1414c8SBarry Smith idx += 2; 4494c1414c8SBarry Smith tmp0 = x[i1]; 4504c1414c8SBarry Smith tmp1 = x[i2]; 4519371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 4529371c9d4SSatish Balay v1 += 2; 4539371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 4549371c9d4SSatish Balay v2 += 2; 4559371c9d4SSatish Balay sum3 += v3[0] * tmp0 + v3[1] * tmp1; 4569371c9d4SSatish Balay v3 += 2; 4574c1414c8SBarry Smith } 4584c1414c8SBarry Smith if (n == sz - 1) { 4594c1414c8SBarry Smith tmp0 = x[*idx++]; 4604c1414c8SBarry Smith sum1 += *v1++ * tmp0; 4614c1414c8SBarry Smith sum2 += *v2++ * tmp0; 4624c1414c8SBarry Smith sum3 += *v3++ * tmp0; 4634c1414c8SBarry Smith } 4644c1414c8SBarry Smith y[row++] = sum1; 4654c1414c8SBarry Smith y[row++] = sum2; 4664c1414c8SBarry Smith y[row++] = sum3; 4674c1414c8SBarry Smith v1 = v3; /* Since the next block to be processed starts there*/ 4684c1414c8SBarry Smith idx += 2 * sz; 4694c1414c8SBarry Smith break; 4704c1414c8SBarry Smith case 4: 47175567043SBarry Smith sum1 = 0.; 47275567043SBarry Smith sum2 = 0.; 47375567043SBarry Smith sum3 = 0.; 47475567043SBarry Smith sum4 = 0.; 4754c1414c8SBarry Smith v2 = v1 + n; 4764c1414c8SBarry Smith v3 = v2 + n; 4774c1414c8SBarry Smith v4 = v3 + n; 4784c1414c8SBarry Smith 4794c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 4804c1414c8SBarry Smith i1 = idx[0]; 4814c1414c8SBarry Smith i2 = idx[1]; 4824c1414c8SBarry Smith idx += 2; 4834c1414c8SBarry Smith tmp0 = x[i1]; 4844c1414c8SBarry Smith tmp1 = x[i2]; 4859371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 4869371c9d4SSatish Balay v1 += 2; 4879371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 4889371c9d4SSatish Balay v2 += 2; 4899371c9d4SSatish Balay sum3 += v3[0] * tmp0 + v3[1] * tmp1; 4909371c9d4SSatish Balay v3 += 2; 4919371c9d4SSatish Balay sum4 += v4[0] * tmp0 + v4[1] * tmp1; 4929371c9d4SSatish Balay v4 += 2; 4934c1414c8SBarry Smith } 4944c1414c8SBarry Smith if (n == sz - 1) { 4954c1414c8SBarry Smith tmp0 = x[*idx++]; 4964c1414c8SBarry Smith sum1 += *v1++ * tmp0; 4974c1414c8SBarry Smith sum2 += *v2++ * tmp0; 4984c1414c8SBarry Smith sum3 += *v3++ * tmp0; 4994c1414c8SBarry Smith sum4 += *v4++ * tmp0; 5004c1414c8SBarry Smith } 5014c1414c8SBarry Smith y[row++] = sum1; 5024c1414c8SBarry Smith y[row++] = sum2; 5034c1414c8SBarry Smith y[row++] = sum3; 5044c1414c8SBarry Smith y[row++] = sum4; 5054c1414c8SBarry Smith v1 = v4; /* Since the next block to be processed starts there*/ 5064c1414c8SBarry Smith idx += 3 * sz; 5074c1414c8SBarry Smith break; 5084c1414c8SBarry Smith case 5: 50975567043SBarry Smith sum1 = 0.; 51075567043SBarry Smith sum2 = 0.; 51175567043SBarry Smith sum3 = 0.; 51275567043SBarry Smith sum4 = 0.; 51375567043SBarry Smith sum5 = 0.; 5144c1414c8SBarry Smith v2 = v1 + n; 5154c1414c8SBarry Smith v3 = v2 + n; 5164c1414c8SBarry Smith v4 = v3 + n; 5174c1414c8SBarry Smith v5 = v4 + n; 5184c1414c8SBarry Smith 5194c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 5204c1414c8SBarry Smith i1 = idx[0]; 5214c1414c8SBarry Smith i2 = idx[1]; 5224c1414c8SBarry Smith idx += 2; 5234c1414c8SBarry Smith tmp0 = x[i1]; 5244c1414c8SBarry Smith tmp1 = x[i2]; 5259371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 5269371c9d4SSatish Balay v1 += 2; 5279371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 5289371c9d4SSatish Balay v2 += 2; 5299371c9d4SSatish Balay sum3 += v3[0] * tmp0 + v3[1] * tmp1; 5309371c9d4SSatish Balay v3 += 2; 5319371c9d4SSatish Balay sum4 += v4[0] * tmp0 + v4[1] * tmp1; 5329371c9d4SSatish Balay v4 += 2; 5339371c9d4SSatish Balay sum5 += v5[0] * tmp0 + v5[1] * tmp1; 5349371c9d4SSatish Balay v5 += 2; 5354c1414c8SBarry Smith } 5364c1414c8SBarry Smith if (n == sz - 1) { 5374c1414c8SBarry Smith tmp0 = x[*idx++]; 5384c1414c8SBarry Smith sum1 += *v1++ * tmp0; 5394c1414c8SBarry Smith sum2 += *v2++ * tmp0; 5404c1414c8SBarry Smith sum3 += *v3++ * tmp0; 5414c1414c8SBarry Smith sum4 += *v4++ * tmp0; 5424c1414c8SBarry Smith sum5 += *v5++ * tmp0; 5434c1414c8SBarry Smith } 5444c1414c8SBarry Smith y[row++] = sum1; 5454c1414c8SBarry Smith y[row++] = sum2; 5464c1414c8SBarry Smith y[row++] = sum3; 5474c1414c8SBarry Smith y[row++] = sum4; 5484c1414c8SBarry Smith y[row++] = sum5; 5494c1414c8SBarry Smith v1 = v5; /* Since the next block to be processed starts there */ 5504c1414c8SBarry Smith idx += 4 * sz; 5514c1414c8SBarry Smith break; 552d71ae5a4SJacob Faibussowitsch default: 553*708a0e70SJunchao Zhang SETERRABORT(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not supported, node row %" PetscInt_FMT " size %" PetscInt_FMT, row, nsz); 5544c1414c8SBarry Smith } 5554c1414c8SBarry Smith } 5569566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(xx, &x)); 5579566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(yy, &y)); 5589566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * a->nz - nonzerorow)); 5593ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5604c1414c8SBarry Smith } 5612ef1f0ffSBarry Smith 5624108e4d5SBarry Smith /* Almost same code as the MatMult_SeqAIJ_Inode() */ 563d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMultAdd_SeqAIJ_Inode(Mat A, Vec xx, Vec zz, Vec yy) 564d71ae5a4SJacob Faibussowitsch { 5654c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 5664c1414c8SBarry Smith PetscScalar sum1, sum2, sum3, sum4, sum5, tmp0, tmp1; 5678758e1faSBarry Smith const MatScalar *v1, *v2, *v3, *v4, *v5; 5688758e1faSBarry Smith const PetscScalar *x; 5698758e1faSBarry Smith PetscScalar *y, *z, *zt; 5708758e1faSBarry Smith PetscInt i1, i2, n, i, row, node_max, nsz, sz; 5718758e1faSBarry Smith const PetscInt *idx, *ns, *ii; 5724c1414c8SBarry Smith 5734c1414c8SBarry Smith PetscFunctionBegin; 5744d12350bSJunchao Zhang PetscCheck(a->inode.size_csr, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 5754c1414c8SBarry Smith node_max = a->inode.node_count; 5764d12350bSJunchao Zhang ns = a->inode.size_csr; /* Node Size array */ 5772205254eSKarl Rupp 5789566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(xx, &x)); 5799566063dSJacob Faibussowitsch PetscCall(VecGetArrayPair(zz, yy, &z, &y)); 5804c1414c8SBarry Smith zt = z; 5814c1414c8SBarry Smith 5824c1414c8SBarry Smith idx = a->j; 5834c1414c8SBarry Smith v1 = a->a; 5844c1414c8SBarry Smith ii = a->i; 5854c1414c8SBarry Smith 5864d12350bSJunchao Zhang for (i = 0; i < node_max; ++i) { 5874d12350bSJunchao Zhang row = ns[i]; 5884d12350bSJunchao Zhang nsz = ns[i + 1] - ns[i]; 5894c1414c8SBarry Smith n = ii[1] - ii[0]; 5904c1414c8SBarry Smith ii += nsz; 5914c1414c8SBarry Smith sz = n; /* No of non zeros in this row */ 5924c1414c8SBarry Smith /* Switch on the size of Node */ 5934c1414c8SBarry Smith switch (nsz) { /* Each loop in 'case' is unrolled */ 5944c1414c8SBarry Smith case 1: 5954c1414c8SBarry Smith sum1 = *zt++; 5964c1414c8SBarry Smith 5974c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 5984c1414c8SBarry Smith i1 = idx[0]; /* The instructions are ordered to */ 5994c1414c8SBarry Smith i2 = idx[1]; /* make the compiler's job easy */ 6004c1414c8SBarry Smith idx += 2; 6014c1414c8SBarry Smith tmp0 = x[i1]; 6024c1414c8SBarry Smith tmp1 = x[i2]; 6039371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 6049371c9d4SSatish Balay v1 += 2; 6054c1414c8SBarry Smith } 6064c1414c8SBarry Smith 6074c1414c8SBarry Smith if (n == sz - 1) { /* Take care of the last nonzero */ 6084c1414c8SBarry Smith tmp0 = x[*idx++]; 6094c1414c8SBarry Smith sum1 += *v1++ * tmp0; 6104c1414c8SBarry Smith } 6114c1414c8SBarry Smith y[row++] = sum1; 6124c1414c8SBarry Smith break; 6134c1414c8SBarry Smith case 2: 6144c1414c8SBarry Smith sum1 = *zt++; 6154c1414c8SBarry Smith sum2 = *zt++; 6164c1414c8SBarry Smith v2 = v1 + n; 6174c1414c8SBarry Smith 6184c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 6194c1414c8SBarry Smith i1 = idx[0]; 6204c1414c8SBarry Smith i2 = idx[1]; 6214c1414c8SBarry Smith idx += 2; 6224c1414c8SBarry Smith tmp0 = x[i1]; 6234c1414c8SBarry Smith tmp1 = x[i2]; 6249371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 6259371c9d4SSatish Balay v1 += 2; 6269371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 6279371c9d4SSatish Balay v2 += 2; 6284c1414c8SBarry Smith } 6294c1414c8SBarry Smith if (n == sz - 1) { 6304c1414c8SBarry Smith tmp0 = x[*idx++]; 6314c1414c8SBarry Smith sum1 += *v1++ * tmp0; 6324c1414c8SBarry Smith sum2 += *v2++ * tmp0; 6334c1414c8SBarry Smith } 6344c1414c8SBarry Smith y[row++] = sum1; 6354c1414c8SBarry Smith y[row++] = sum2; 6364c1414c8SBarry Smith v1 = v2; /* Since the next block to be processed starts there*/ 6374c1414c8SBarry Smith idx += sz; 6384c1414c8SBarry Smith break; 6394c1414c8SBarry Smith case 3: 6404c1414c8SBarry Smith sum1 = *zt++; 6414c1414c8SBarry Smith sum2 = *zt++; 6424c1414c8SBarry Smith sum3 = *zt++; 6434c1414c8SBarry Smith v2 = v1 + n; 6444c1414c8SBarry Smith v3 = v2 + n; 6454c1414c8SBarry Smith 6464c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 6474c1414c8SBarry Smith i1 = idx[0]; 6484c1414c8SBarry Smith i2 = idx[1]; 6494c1414c8SBarry Smith idx += 2; 6504c1414c8SBarry Smith tmp0 = x[i1]; 6514c1414c8SBarry Smith tmp1 = x[i2]; 6529371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 6539371c9d4SSatish Balay v1 += 2; 6549371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 6559371c9d4SSatish Balay v2 += 2; 6569371c9d4SSatish Balay sum3 += v3[0] * tmp0 + v3[1] * tmp1; 6579371c9d4SSatish Balay v3 += 2; 6584c1414c8SBarry Smith } 6594c1414c8SBarry Smith if (n == sz - 1) { 6604c1414c8SBarry Smith tmp0 = x[*idx++]; 6614c1414c8SBarry Smith sum1 += *v1++ * tmp0; 6624c1414c8SBarry Smith sum2 += *v2++ * tmp0; 6634c1414c8SBarry Smith sum3 += *v3++ * tmp0; 6644c1414c8SBarry Smith } 6654c1414c8SBarry Smith y[row++] = sum1; 6664c1414c8SBarry Smith y[row++] = sum2; 6674c1414c8SBarry Smith y[row++] = sum3; 6684c1414c8SBarry Smith v1 = v3; /* Since the next block to be processed starts there*/ 6694c1414c8SBarry Smith idx += 2 * sz; 6704c1414c8SBarry Smith break; 6714c1414c8SBarry Smith case 4: 6724c1414c8SBarry Smith sum1 = *zt++; 6734c1414c8SBarry Smith sum2 = *zt++; 6744c1414c8SBarry Smith sum3 = *zt++; 6754c1414c8SBarry Smith sum4 = *zt++; 6764c1414c8SBarry Smith v2 = v1 + n; 6774c1414c8SBarry Smith v3 = v2 + n; 6784c1414c8SBarry Smith v4 = v3 + n; 6794c1414c8SBarry Smith 6804c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 6814c1414c8SBarry Smith i1 = idx[0]; 6824c1414c8SBarry Smith i2 = idx[1]; 6834c1414c8SBarry Smith idx += 2; 6844c1414c8SBarry Smith tmp0 = x[i1]; 6854c1414c8SBarry Smith tmp1 = x[i2]; 6869371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 6879371c9d4SSatish Balay v1 += 2; 6889371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 6899371c9d4SSatish Balay v2 += 2; 6909371c9d4SSatish Balay sum3 += v3[0] * tmp0 + v3[1] * tmp1; 6919371c9d4SSatish Balay v3 += 2; 6929371c9d4SSatish Balay sum4 += v4[0] * tmp0 + v4[1] * tmp1; 6939371c9d4SSatish Balay v4 += 2; 6944c1414c8SBarry Smith } 6954c1414c8SBarry Smith if (n == sz - 1) { 6964c1414c8SBarry Smith tmp0 = x[*idx++]; 6974c1414c8SBarry Smith sum1 += *v1++ * tmp0; 6984c1414c8SBarry Smith sum2 += *v2++ * tmp0; 6994c1414c8SBarry Smith sum3 += *v3++ * tmp0; 7004c1414c8SBarry Smith sum4 += *v4++ * tmp0; 7014c1414c8SBarry Smith } 7024c1414c8SBarry Smith y[row++] = sum1; 7034c1414c8SBarry Smith y[row++] = sum2; 7044c1414c8SBarry Smith y[row++] = sum3; 7054c1414c8SBarry Smith y[row++] = sum4; 7064c1414c8SBarry Smith v1 = v4; /* Since the next block to be processed starts there*/ 7074c1414c8SBarry Smith idx += 3 * sz; 7084c1414c8SBarry Smith break; 7094c1414c8SBarry Smith case 5: 7104c1414c8SBarry Smith sum1 = *zt++; 7114c1414c8SBarry Smith sum2 = *zt++; 7124c1414c8SBarry Smith sum3 = *zt++; 7134c1414c8SBarry Smith sum4 = *zt++; 7144c1414c8SBarry Smith sum5 = *zt++; 7154c1414c8SBarry Smith v2 = v1 + n; 7164c1414c8SBarry Smith v3 = v2 + n; 7174c1414c8SBarry Smith v4 = v3 + n; 7184c1414c8SBarry Smith v5 = v4 + n; 7194c1414c8SBarry Smith 7204c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 7214c1414c8SBarry Smith i1 = idx[0]; 7224c1414c8SBarry Smith i2 = idx[1]; 7234c1414c8SBarry Smith idx += 2; 7244c1414c8SBarry Smith tmp0 = x[i1]; 7254c1414c8SBarry Smith tmp1 = x[i2]; 7269371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 7279371c9d4SSatish Balay v1 += 2; 7289371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 7299371c9d4SSatish Balay v2 += 2; 7309371c9d4SSatish Balay sum3 += v3[0] * tmp0 + v3[1] * tmp1; 7319371c9d4SSatish Balay v3 += 2; 7329371c9d4SSatish Balay sum4 += v4[0] * tmp0 + v4[1] * tmp1; 7339371c9d4SSatish Balay v4 += 2; 7349371c9d4SSatish Balay sum5 += v5[0] * tmp0 + v5[1] * tmp1; 7359371c9d4SSatish Balay v5 += 2; 7364c1414c8SBarry Smith } 7374c1414c8SBarry Smith if (n == sz - 1) { 7384c1414c8SBarry Smith tmp0 = x[*idx++]; 7394c1414c8SBarry Smith sum1 += *v1++ * tmp0; 7404c1414c8SBarry Smith sum2 += *v2++ * tmp0; 7414c1414c8SBarry Smith sum3 += *v3++ * tmp0; 7424c1414c8SBarry Smith sum4 += *v4++ * tmp0; 7434c1414c8SBarry Smith sum5 += *v5++ * tmp0; 7444c1414c8SBarry Smith } 7454c1414c8SBarry Smith y[row++] = sum1; 7464c1414c8SBarry Smith y[row++] = sum2; 7474c1414c8SBarry Smith y[row++] = sum3; 7484c1414c8SBarry Smith y[row++] = sum4; 7494c1414c8SBarry Smith y[row++] = sum5; 7504c1414c8SBarry Smith v1 = v5; /* Since the next block to be processed starts there */ 7514c1414c8SBarry Smith idx += 4 * sz; 7524c1414c8SBarry Smith break; 753d71ae5a4SJacob Faibussowitsch default: 754d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not yet supported"); 7554c1414c8SBarry Smith } 7564c1414c8SBarry Smith } 7579566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(xx, &x)); 7589566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayPair(zz, yy, &z, &y)); 7599566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * a->nz)); 7603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7614c1414c8SBarry Smith } 7624c1414c8SBarry Smith 763ff6a9541SJacob Faibussowitsch static PetscErrorCode MatSolve_SeqAIJ_Inode_inplace(Mat A, Vec bb, Vec xx) 764d71ae5a4SJacob Faibussowitsch { 7654c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 7664c1414c8SBarry Smith IS iscol = a->col, isrow = a->row; 7675d0c19d7SBarry Smith const PetscInt *r, *c, *rout, *cout; 7688758e1faSBarry Smith PetscInt i, j, n = A->rmap->n, nz; 7698758e1faSBarry Smith PetscInt node_max, *ns, row, nsz, aii, i0, i1; 7708758e1faSBarry Smith const PetscInt *ai = a->i, *a_j = a->j, *vi, *ad, *aj; 771d9fead3dSBarry Smith PetscScalar *x, *tmp, *tmps, tmp0, tmp1; 772d9fead3dSBarry Smith PetscScalar sum1, sum2, sum3, sum4, sum5; 773dd6ea824SBarry Smith const MatScalar *v1, *v2, *v3, *v4, *v5, *a_a = a->a, *aa; 774dd6ea824SBarry Smith const PetscScalar *b; 7754c1414c8SBarry Smith 7764c1414c8SBarry Smith PetscFunctionBegin; 7774d12350bSJunchao Zhang PetscCheck(a->inode.size_csr, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 7784c1414c8SBarry Smith node_max = a->inode.node_count; 7794d12350bSJunchao Zhang ns = a->inode.size_csr; /* Node Size array */ 7804c1414c8SBarry Smith 7819566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(bb, &b)); 7829566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(xx, &x)); 7834c1414c8SBarry Smith tmp = a->solve_work; 7844c1414c8SBarry Smith 7859371c9d4SSatish Balay PetscCall(ISGetIndices(isrow, &rout)); 7869371c9d4SSatish Balay r = rout; 7879371c9d4SSatish Balay PetscCall(ISGetIndices(iscol, &cout)); 7889371c9d4SSatish Balay c = cout + (n - 1); 7894c1414c8SBarry Smith 7904c1414c8SBarry Smith /* forward solve the lower triangular */ 7914c1414c8SBarry Smith tmps = tmp; 7924c1414c8SBarry Smith aa = a_a; 7934c1414c8SBarry Smith aj = a_j; 7944c1414c8SBarry Smith ad = a->diag; 7954c1414c8SBarry Smith 7964c1414c8SBarry Smith for (i = 0, row = 0; i < node_max; ++i) { 7974d12350bSJunchao Zhang row = ns[i]; 7984d12350bSJunchao Zhang nsz = ns[i + 1] - ns[i]; 7994c1414c8SBarry Smith aii = ai[row]; 8004c1414c8SBarry Smith v1 = aa + aii; 8014c1414c8SBarry Smith vi = aj + aii; 8024c1414c8SBarry Smith nz = ad[row] - aii; 80326549573SJed Brown if (i < node_max - 1) { 80426549573SJed Brown /* Prefetch the block after the current one, the prefetch itself can't cause a memory error, 80591c35059SPierre Jolivet * but our indexing to determine its size could. */ 80650d8bf02SJed Brown PetscPrefetchBlock(aj + ai[row + nsz], ad[row + nsz] - ai[row + nsz], 0, PETSC_PREFETCH_HINT_NTA); /* indices */ 80726549573SJed Brown /* In my tests, it seems to be better to fetch entire rows instead of just the lower-triangular part */ 8084d12350bSJunchao Zhang PetscPrefetchBlock(aa + ai[row + nsz], ad[ns[i + 2] - 1] - ai[row + nsz], 0, PETSC_PREFETCH_HINT_NTA); 80926549573SJed Brown /* for (j=0; j<ns[i+1]; j++) PetscPrefetchBlock(aa+ai[row+nsz+j],ad[row+nsz+j]-ai[row+nsz+j],0,0); */ 81026549573SJed Brown } 8114c1414c8SBarry Smith 8124c1414c8SBarry Smith switch (nsz) { /* Each loop in 'case' is unrolled */ 8134c1414c8SBarry Smith case 1: 8144c1414c8SBarry Smith sum1 = b[*r++]; 8154c1414c8SBarry Smith for (j = 0; j < nz - 1; j += 2) { 8164c1414c8SBarry Smith i0 = vi[0]; 8174c1414c8SBarry Smith i1 = vi[1]; 8184c1414c8SBarry Smith vi += 2; 8194c1414c8SBarry Smith tmp0 = tmps[i0]; 8204c1414c8SBarry Smith tmp1 = tmps[i1]; 8219371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 8229371c9d4SSatish Balay v1 += 2; 8234c1414c8SBarry Smith } 8244c1414c8SBarry Smith if (j == nz - 1) { 8254c1414c8SBarry Smith tmp0 = tmps[*vi++]; 8264c1414c8SBarry Smith sum1 -= *v1++ * tmp0; 8274c1414c8SBarry Smith } 8284c1414c8SBarry Smith tmp[row++] = sum1; 8294c1414c8SBarry Smith break; 8304c1414c8SBarry Smith case 2: 8314c1414c8SBarry Smith sum1 = b[*r++]; 8324c1414c8SBarry Smith sum2 = b[*r++]; 8334c1414c8SBarry Smith v2 = aa + ai[row + 1]; 8344c1414c8SBarry Smith 8354c1414c8SBarry Smith for (j = 0; j < nz - 1; j += 2) { 8364c1414c8SBarry Smith i0 = vi[0]; 8374c1414c8SBarry Smith i1 = vi[1]; 8384c1414c8SBarry Smith vi += 2; 8394c1414c8SBarry Smith tmp0 = tmps[i0]; 8404c1414c8SBarry Smith tmp1 = tmps[i1]; 8419371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 8429371c9d4SSatish Balay v1 += 2; 8439371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 8449371c9d4SSatish Balay v2 += 2; 8454c1414c8SBarry Smith } 8464c1414c8SBarry Smith if (j == nz - 1) { 8474c1414c8SBarry Smith tmp0 = tmps[*vi++]; 8484c1414c8SBarry Smith sum1 -= *v1++ * tmp0; 8494c1414c8SBarry Smith sum2 -= *v2++ * tmp0; 8504c1414c8SBarry Smith } 8514c1414c8SBarry Smith sum2 -= *v2++ * sum1; 8524c1414c8SBarry Smith tmp[row++] = sum1; 8534c1414c8SBarry Smith tmp[row++] = sum2; 8544c1414c8SBarry Smith break; 8554c1414c8SBarry Smith case 3: 8564c1414c8SBarry Smith sum1 = b[*r++]; 8574c1414c8SBarry Smith sum2 = b[*r++]; 8584c1414c8SBarry Smith sum3 = b[*r++]; 8594c1414c8SBarry Smith v2 = aa + ai[row + 1]; 8604c1414c8SBarry Smith v3 = aa + ai[row + 2]; 8614c1414c8SBarry Smith 8624c1414c8SBarry Smith for (j = 0; j < nz - 1; j += 2) { 8634c1414c8SBarry Smith i0 = vi[0]; 8644c1414c8SBarry Smith i1 = vi[1]; 8654c1414c8SBarry Smith vi += 2; 8664c1414c8SBarry Smith tmp0 = tmps[i0]; 8674c1414c8SBarry Smith tmp1 = tmps[i1]; 8689371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 8699371c9d4SSatish Balay v1 += 2; 8709371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 8719371c9d4SSatish Balay v2 += 2; 8729371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 8739371c9d4SSatish Balay v3 += 2; 8744c1414c8SBarry Smith } 8754c1414c8SBarry Smith if (j == nz - 1) { 8764c1414c8SBarry Smith tmp0 = tmps[*vi++]; 8774c1414c8SBarry Smith sum1 -= *v1++ * tmp0; 8784c1414c8SBarry Smith sum2 -= *v2++ * tmp0; 8794c1414c8SBarry Smith sum3 -= *v3++ * tmp0; 8804c1414c8SBarry Smith } 8814c1414c8SBarry Smith sum2 -= *v2++ * sum1; 8824c1414c8SBarry Smith sum3 -= *v3++ * sum1; 8834c1414c8SBarry Smith sum3 -= *v3++ * sum2; 8842205254eSKarl Rupp 8854c1414c8SBarry Smith tmp[row++] = sum1; 8864c1414c8SBarry Smith tmp[row++] = sum2; 8874c1414c8SBarry Smith tmp[row++] = sum3; 8884c1414c8SBarry Smith break; 8894c1414c8SBarry Smith 8904c1414c8SBarry Smith case 4: 8914c1414c8SBarry Smith sum1 = b[*r++]; 8924c1414c8SBarry Smith sum2 = b[*r++]; 8934c1414c8SBarry Smith sum3 = b[*r++]; 8944c1414c8SBarry Smith sum4 = b[*r++]; 8954c1414c8SBarry Smith v2 = aa + ai[row + 1]; 8964c1414c8SBarry Smith v3 = aa + ai[row + 2]; 8974c1414c8SBarry Smith v4 = aa + ai[row + 3]; 8984c1414c8SBarry Smith 8994c1414c8SBarry Smith for (j = 0; j < nz - 1; j += 2) { 9004c1414c8SBarry Smith i0 = vi[0]; 9014c1414c8SBarry Smith i1 = vi[1]; 9024c1414c8SBarry Smith vi += 2; 9034c1414c8SBarry Smith tmp0 = tmps[i0]; 9044c1414c8SBarry Smith tmp1 = tmps[i1]; 9059371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 9069371c9d4SSatish Balay v1 += 2; 9079371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 9089371c9d4SSatish Balay v2 += 2; 9099371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 9109371c9d4SSatish Balay v3 += 2; 9119371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 9129371c9d4SSatish Balay v4 += 2; 9134c1414c8SBarry Smith } 9144c1414c8SBarry Smith if (j == nz - 1) { 9154c1414c8SBarry Smith tmp0 = tmps[*vi++]; 9164c1414c8SBarry Smith sum1 -= *v1++ * tmp0; 9174c1414c8SBarry Smith sum2 -= *v2++ * tmp0; 9184c1414c8SBarry Smith sum3 -= *v3++ * tmp0; 9194c1414c8SBarry Smith sum4 -= *v4++ * tmp0; 9204c1414c8SBarry Smith } 9214c1414c8SBarry Smith sum2 -= *v2++ * sum1; 9224c1414c8SBarry Smith sum3 -= *v3++ * sum1; 9234c1414c8SBarry Smith sum4 -= *v4++ * sum1; 9244c1414c8SBarry Smith sum3 -= *v3++ * sum2; 9254c1414c8SBarry Smith sum4 -= *v4++ * sum2; 9264c1414c8SBarry Smith sum4 -= *v4++ * sum3; 9274c1414c8SBarry Smith 9284c1414c8SBarry Smith tmp[row++] = sum1; 9294c1414c8SBarry Smith tmp[row++] = sum2; 9304c1414c8SBarry Smith tmp[row++] = sum3; 9314c1414c8SBarry Smith tmp[row++] = sum4; 9324c1414c8SBarry Smith break; 9334c1414c8SBarry Smith case 5: 9344c1414c8SBarry Smith sum1 = b[*r++]; 9354c1414c8SBarry Smith sum2 = b[*r++]; 9364c1414c8SBarry Smith sum3 = b[*r++]; 9374c1414c8SBarry Smith sum4 = b[*r++]; 9384c1414c8SBarry Smith sum5 = b[*r++]; 9394c1414c8SBarry Smith v2 = aa + ai[row + 1]; 9404c1414c8SBarry Smith v3 = aa + ai[row + 2]; 9414c1414c8SBarry Smith v4 = aa + ai[row + 3]; 9424c1414c8SBarry Smith v5 = aa + ai[row + 4]; 9434c1414c8SBarry Smith 9444c1414c8SBarry Smith for (j = 0; j < nz - 1; j += 2) { 9454c1414c8SBarry Smith i0 = vi[0]; 9464c1414c8SBarry Smith i1 = vi[1]; 9474c1414c8SBarry Smith vi += 2; 9484c1414c8SBarry Smith tmp0 = tmps[i0]; 9494c1414c8SBarry Smith tmp1 = tmps[i1]; 9509371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 9519371c9d4SSatish Balay v1 += 2; 9529371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 9539371c9d4SSatish Balay v2 += 2; 9549371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 9559371c9d4SSatish Balay v3 += 2; 9569371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 9579371c9d4SSatish Balay v4 += 2; 9589371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 9599371c9d4SSatish Balay v5 += 2; 9604c1414c8SBarry Smith } 9614c1414c8SBarry Smith if (j == nz - 1) { 9624c1414c8SBarry Smith tmp0 = tmps[*vi++]; 9634c1414c8SBarry Smith sum1 -= *v1++ * tmp0; 9644c1414c8SBarry Smith sum2 -= *v2++ * tmp0; 9654c1414c8SBarry Smith sum3 -= *v3++ * tmp0; 9664c1414c8SBarry Smith sum4 -= *v4++ * tmp0; 9674c1414c8SBarry Smith sum5 -= *v5++ * tmp0; 9684c1414c8SBarry Smith } 9694c1414c8SBarry Smith 9704c1414c8SBarry Smith sum2 -= *v2++ * sum1; 9714c1414c8SBarry Smith sum3 -= *v3++ * sum1; 9724c1414c8SBarry Smith sum4 -= *v4++ * sum1; 9734c1414c8SBarry Smith sum5 -= *v5++ * sum1; 9744c1414c8SBarry Smith sum3 -= *v3++ * sum2; 9754c1414c8SBarry Smith sum4 -= *v4++ * sum2; 9764c1414c8SBarry Smith sum5 -= *v5++ * sum2; 9774c1414c8SBarry Smith sum4 -= *v4++ * sum3; 9784c1414c8SBarry Smith sum5 -= *v5++ * sum3; 9794c1414c8SBarry Smith sum5 -= *v5++ * sum4; 9804c1414c8SBarry Smith 9814c1414c8SBarry Smith tmp[row++] = sum1; 9824c1414c8SBarry Smith tmp[row++] = sum2; 9834c1414c8SBarry Smith tmp[row++] = sum3; 9844c1414c8SBarry Smith tmp[row++] = sum4; 9854c1414c8SBarry Smith tmp[row++] = sum5; 9864c1414c8SBarry Smith break; 987d71ae5a4SJacob Faibussowitsch default: 988d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not yet supported "); 9894c1414c8SBarry Smith } 9904c1414c8SBarry Smith } 9914c1414c8SBarry Smith /* backward solve the upper triangular */ 9924d12350bSJunchao Zhang for (i = node_max - 1; i >= 0; i--) { 9934d12350bSJunchao Zhang row = ns[i + 1]; 9944d12350bSJunchao Zhang nsz = ns[i + 1] - ns[i]; 9954c1414c8SBarry Smith aii = ai[row + 1] - 1; 9964c1414c8SBarry Smith v1 = aa + aii; 9974c1414c8SBarry Smith vi = aj + aii; 9984c1414c8SBarry Smith nz = aii - ad[row]; 9994c1414c8SBarry Smith switch (nsz) { /* Each loop in 'case' is unrolled */ 10004c1414c8SBarry Smith case 1: 10014c1414c8SBarry Smith sum1 = tmp[row]; 10024c1414c8SBarry Smith 10034c1414c8SBarry Smith for (j = nz; j > 1; j -= 2) { 10044c1414c8SBarry Smith vi -= 2; 10054c1414c8SBarry Smith i0 = vi[2]; 10064c1414c8SBarry Smith i1 = vi[1]; 10074c1414c8SBarry Smith tmp0 = tmps[i0]; 10084c1414c8SBarry Smith tmp1 = tmps[i1]; 10094c1414c8SBarry Smith v1 -= 2; 10104c1414c8SBarry Smith sum1 -= v1[2] * tmp0 + v1[1] * tmp1; 10114c1414c8SBarry Smith } 10124c1414c8SBarry Smith if (j == 1) { 10134c1414c8SBarry Smith tmp0 = tmps[*vi--]; 10144c1414c8SBarry Smith sum1 -= *v1-- * tmp0; 10154c1414c8SBarry Smith } 10169371c9d4SSatish Balay x[*c--] = tmp[row] = sum1 * a_a[ad[row]]; 10179371c9d4SSatish Balay row--; 10184c1414c8SBarry Smith break; 10194c1414c8SBarry Smith case 2: 10204c1414c8SBarry Smith sum1 = tmp[row]; 10214c1414c8SBarry Smith sum2 = tmp[row - 1]; 10224c1414c8SBarry Smith v2 = aa + ai[row] - 1; 10234c1414c8SBarry Smith for (j = nz; j > 1; j -= 2) { 10244c1414c8SBarry Smith vi -= 2; 10254c1414c8SBarry Smith i0 = vi[2]; 10264c1414c8SBarry Smith i1 = vi[1]; 10274c1414c8SBarry Smith tmp0 = tmps[i0]; 10284c1414c8SBarry Smith tmp1 = tmps[i1]; 10294c1414c8SBarry Smith v1 -= 2; 10304c1414c8SBarry Smith v2 -= 2; 10314c1414c8SBarry Smith sum1 -= v1[2] * tmp0 + v1[1] * tmp1; 10324c1414c8SBarry Smith sum2 -= v2[2] * tmp0 + v2[1] * tmp1; 10334c1414c8SBarry Smith } 10344c1414c8SBarry Smith if (j == 1) { 10354c1414c8SBarry Smith tmp0 = tmps[*vi--]; 10364c1414c8SBarry Smith sum1 -= *v1-- * tmp0; 10374c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 10384c1414c8SBarry Smith } 10394c1414c8SBarry Smith 10409371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum1 * a_a[ad[row]]; 10419371c9d4SSatish Balay row--; 10424c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 10439371c9d4SSatish Balay x[*c--] = tmp[row] = sum2 * a_a[ad[row]]; 10449371c9d4SSatish Balay row--; 10454c1414c8SBarry Smith break; 10464c1414c8SBarry Smith case 3: 10474c1414c8SBarry Smith sum1 = tmp[row]; 10484c1414c8SBarry Smith sum2 = tmp[row - 1]; 10494c1414c8SBarry Smith sum3 = tmp[row - 2]; 10504c1414c8SBarry Smith v2 = aa + ai[row] - 1; 10514c1414c8SBarry Smith v3 = aa + ai[row - 1] - 1; 10524c1414c8SBarry Smith for (j = nz; j > 1; j -= 2) { 10534c1414c8SBarry Smith vi -= 2; 10544c1414c8SBarry Smith i0 = vi[2]; 10554c1414c8SBarry Smith i1 = vi[1]; 10564c1414c8SBarry Smith tmp0 = tmps[i0]; 10574c1414c8SBarry Smith tmp1 = tmps[i1]; 10584c1414c8SBarry Smith v1 -= 2; 10594c1414c8SBarry Smith v2 -= 2; 10604c1414c8SBarry Smith v3 -= 2; 10614c1414c8SBarry Smith sum1 -= v1[2] * tmp0 + v1[1] * tmp1; 10624c1414c8SBarry Smith sum2 -= v2[2] * tmp0 + v2[1] * tmp1; 10634c1414c8SBarry Smith sum3 -= v3[2] * tmp0 + v3[1] * tmp1; 10644c1414c8SBarry Smith } 10654c1414c8SBarry Smith if (j == 1) { 10664c1414c8SBarry Smith tmp0 = tmps[*vi--]; 10674c1414c8SBarry Smith sum1 -= *v1-- * tmp0; 10684c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 10694c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 10704c1414c8SBarry Smith } 10719371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum1 * a_a[ad[row]]; 10729371c9d4SSatish Balay row--; 10734c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 10744c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 10759371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum2 * a_a[ad[row]]; 10769371c9d4SSatish Balay row--; 10774c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 10789371c9d4SSatish Balay x[*c--] = tmp[row] = sum3 * a_a[ad[row]]; 10799371c9d4SSatish Balay row--; 10804c1414c8SBarry Smith 10814c1414c8SBarry Smith break; 10824c1414c8SBarry Smith case 4: 10834c1414c8SBarry Smith sum1 = tmp[row]; 10844c1414c8SBarry Smith sum2 = tmp[row - 1]; 10854c1414c8SBarry Smith sum3 = tmp[row - 2]; 10864c1414c8SBarry Smith sum4 = tmp[row - 3]; 10874c1414c8SBarry Smith v2 = aa + ai[row] - 1; 10884c1414c8SBarry Smith v3 = aa + ai[row - 1] - 1; 10894c1414c8SBarry Smith v4 = aa + ai[row - 2] - 1; 10904c1414c8SBarry Smith 10914c1414c8SBarry Smith for (j = nz; j > 1; j -= 2) { 10924c1414c8SBarry Smith vi -= 2; 10934c1414c8SBarry Smith i0 = vi[2]; 10944c1414c8SBarry Smith i1 = vi[1]; 10954c1414c8SBarry Smith tmp0 = tmps[i0]; 10964c1414c8SBarry Smith tmp1 = tmps[i1]; 10974c1414c8SBarry Smith v1 -= 2; 10984c1414c8SBarry Smith v2 -= 2; 10994c1414c8SBarry Smith v3 -= 2; 11004c1414c8SBarry Smith v4 -= 2; 11014c1414c8SBarry Smith sum1 -= v1[2] * tmp0 + v1[1] * tmp1; 11024c1414c8SBarry Smith sum2 -= v2[2] * tmp0 + v2[1] * tmp1; 11034c1414c8SBarry Smith sum3 -= v3[2] * tmp0 + v3[1] * tmp1; 11044c1414c8SBarry Smith sum4 -= v4[2] * tmp0 + v4[1] * tmp1; 11054c1414c8SBarry Smith } 11064c1414c8SBarry Smith if (j == 1) { 11074c1414c8SBarry Smith tmp0 = tmps[*vi--]; 11084c1414c8SBarry Smith sum1 -= *v1-- * tmp0; 11094c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 11104c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 11114c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11124c1414c8SBarry Smith } 11134c1414c8SBarry Smith 11149371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum1 * a_a[ad[row]]; 11159371c9d4SSatish Balay row--; 11164c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 11174c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 11184c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11199371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum2 * a_a[ad[row]]; 11209371c9d4SSatish Balay row--; 11214c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 11224c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11239371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum3 * a_a[ad[row]]; 11249371c9d4SSatish Balay row--; 11254c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11269371c9d4SSatish Balay x[*c--] = tmp[row] = sum4 * a_a[ad[row]]; 11279371c9d4SSatish Balay row--; 11284c1414c8SBarry Smith break; 11294c1414c8SBarry Smith case 5: 11304c1414c8SBarry Smith sum1 = tmp[row]; 11314c1414c8SBarry Smith sum2 = tmp[row - 1]; 11324c1414c8SBarry Smith sum3 = tmp[row - 2]; 11334c1414c8SBarry Smith sum4 = tmp[row - 3]; 11344c1414c8SBarry Smith sum5 = tmp[row - 4]; 11354c1414c8SBarry Smith v2 = aa + ai[row] - 1; 11364c1414c8SBarry Smith v3 = aa + ai[row - 1] - 1; 11374c1414c8SBarry Smith v4 = aa + ai[row - 2] - 1; 11384c1414c8SBarry Smith v5 = aa + ai[row - 3] - 1; 11394c1414c8SBarry Smith for (j = nz; j > 1; j -= 2) { 11404c1414c8SBarry Smith vi -= 2; 11414c1414c8SBarry Smith i0 = vi[2]; 11424c1414c8SBarry Smith i1 = vi[1]; 11434c1414c8SBarry Smith tmp0 = tmps[i0]; 11444c1414c8SBarry Smith tmp1 = tmps[i1]; 11454c1414c8SBarry Smith v1 -= 2; 11464c1414c8SBarry Smith v2 -= 2; 11474c1414c8SBarry Smith v3 -= 2; 11484c1414c8SBarry Smith v4 -= 2; 11494c1414c8SBarry Smith v5 -= 2; 11504c1414c8SBarry Smith sum1 -= v1[2] * tmp0 + v1[1] * tmp1; 11514c1414c8SBarry Smith sum2 -= v2[2] * tmp0 + v2[1] * tmp1; 11524c1414c8SBarry Smith sum3 -= v3[2] * tmp0 + v3[1] * tmp1; 11534c1414c8SBarry Smith sum4 -= v4[2] * tmp0 + v4[1] * tmp1; 11544c1414c8SBarry Smith sum5 -= v5[2] * tmp0 + v5[1] * tmp1; 11554c1414c8SBarry Smith } 11564c1414c8SBarry Smith if (j == 1) { 11574c1414c8SBarry Smith tmp0 = tmps[*vi--]; 11584c1414c8SBarry Smith sum1 -= *v1-- * tmp0; 11594c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 11604c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 11614c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11624c1414c8SBarry Smith sum5 -= *v5-- * tmp0; 11634c1414c8SBarry Smith } 11644c1414c8SBarry Smith 11659371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum1 * a_a[ad[row]]; 11669371c9d4SSatish Balay row--; 11674c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 11684c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 11694c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11704c1414c8SBarry Smith sum5 -= *v5-- * tmp0; 11719371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum2 * a_a[ad[row]]; 11729371c9d4SSatish Balay row--; 11734c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 11744c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11754c1414c8SBarry Smith sum5 -= *v5-- * tmp0; 11769371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum3 * a_a[ad[row]]; 11779371c9d4SSatish Balay row--; 11784c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11794c1414c8SBarry Smith sum5 -= *v5-- * tmp0; 11809371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum4 * a_a[ad[row]]; 11819371c9d4SSatish Balay row--; 11824c1414c8SBarry Smith sum5 -= *v5-- * tmp0; 11839371c9d4SSatish Balay x[*c--] = tmp[row] = sum5 * a_a[ad[row]]; 11849371c9d4SSatish Balay row--; 11854c1414c8SBarry Smith break; 1186d71ae5a4SJacob Faibussowitsch default: 1187d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not yet supported "); 11884c1414c8SBarry Smith } 11894c1414c8SBarry Smith } 11909566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &rout)); 11919566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol, &cout)); 11929566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(bb, &b)); 11939566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(xx, &x)); 11949566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * a->nz - A->cmap->n)); 11953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 11964c1414c8SBarry Smith } 11974c1414c8SBarry Smith 1198d71ae5a4SJacob Faibussowitsch PetscErrorCode MatLUFactorNumeric_SeqAIJ_Inode(Mat B, Mat A, const MatFactorInfo *info) 1199d71ae5a4SJacob Faibussowitsch { 120028f1b45aSHong Zhang Mat C = B; 120128f1b45aSHong Zhang Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data, *b = (Mat_SeqAIJ *)C->data; 120228f1b45aSHong Zhang IS isrow = b->row, isicol = b->icol; 120328f1b45aSHong Zhang const PetscInt *r, *ic, *ics; 120428f1b45aSHong Zhang const PetscInt n = A->rmap->n, *ai = a->i, *aj = a->j, *bi = b->i, *bj = b->j, *bdiag = b->diag; 120528f1b45aSHong Zhang PetscInt i, j, k, nz, nzL, row, *pj; 120628f1b45aSHong Zhang const PetscInt *ajtmp, *bjtmp; 12079877982aSShri Abhyankar MatScalar *pc, *pc1, *pc2, *pc3, *pc4, mul1, mul2, mul3, mul4, *pv, *rtmp1, *rtmp2, *rtmp3, *rtmp4; 12089877982aSShri Abhyankar const MatScalar *aa = a->a, *v, *v1, *v2, *v3, *v4; 120928f1b45aSHong Zhang FactorShiftCtx sctx; 12104f81c4b7SBarry Smith const PetscInt *ddiag; 121128f1b45aSHong Zhang PetscReal rs; 121228f1b45aSHong Zhang MatScalar d; 12134f81c4b7SBarry Smith PetscInt inod, nodesz, node_max, col; 12144f81c4b7SBarry Smith const PetscInt *ns; 121507b50cabSHong Zhang PetscInt *tmp_vec1, *tmp_vec2, *nsmap; 12160e95ead3SHong Zhang 121728f1b45aSHong Zhang PetscFunctionBegin; 121828f1b45aSHong Zhang /* MatPivotSetUp(): initialize shift context sctx */ 12199566063dSJacob Faibussowitsch PetscCall(PetscMemzero(&sctx, sizeof(FactorShiftCtx))); 122028f1b45aSHong Zhang 1221f4db908eSBarry Smith if (info->shifttype == (PetscReal)MAT_SHIFT_POSITIVE_DEFINITE) { /* set sctx.shift_top=max{rs} */ 122228f1b45aSHong Zhang ddiag = a->diag; 122328f1b45aSHong Zhang sctx.shift_top = info->zeropivot; 122428f1b45aSHong Zhang for (i = 0; i < n; i++) { 122528f1b45aSHong Zhang /* calculate sum(|aij|)-RealPart(aii), amt of shift needed for this row */ 122628f1b45aSHong Zhang d = (aa)[ddiag[i]]; 122728f1b45aSHong Zhang rs = -PetscAbsScalar(d) - PetscRealPart(d); 122828f1b45aSHong Zhang v = aa + ai[i]; 122928f1b45aSHong Zhang nz = ai[i + 1] - ai[i]; 12302205254eSKarl Rupp for (j = 0; j < nz; j++) rs += PetscAbsScalar(v[j]); 123128f1b45aSHong Zhang if (rs > sctx.shift_top) sctx.shift_top = rs; 123228f1b45aSHong Zhang } 123328f1b45aSHong Zhang sctx.shift_top *= 1.1; 123428f1b45aSHong Zhang sctx.nshift_max = 5; 123528f1b45aSHong Zhang sctx.shift_lo = 0.; 123628f1b45aSHong Zhang sctx.shift_hi = 1.; 123728f1b45aSHong Zhang } 123828f1b45aSHong Zhang 12399566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &r)); 12409566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isicol, &ic)); 124168785679SHong Zhang 12429566063dSJacob Faibussowitsch PetscCall(PetscCalloc4(n, &rtmp1, n, &rtmp2, n, &rtmp3, n, &rtmp4)); 124328f1b45aSHong Zhang ics = ic; 124428f1b45aSHong Zhang 124528f1b45aSHong Zhang node_max = a->inode.node_count; 12464d12350bSJunchao Zhang ns = a->inode.size_csr; 124728b400f6SJacob Faibussowitsch PetscCheck(ns, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Matrix without inode information"); 124828f1b45aSHong Zhang 12499877982aSShri Abhyankar /* If max inode size > 4, split it into two inodes.*/ 125068785679SHong Zhang /* also map the inode sizes according to the ordering */ 12519566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n + 1, &tmp_vec1)); 125268785679SHong Zhang for (i = 0, j = 0; i < node_max; ++i, ++j) { 12534d12350bSJunchao Zhang nodesz = ns[i + 1] - ns[i]; 12544d12350bSJunchao Zhang if (nodesz > 4) { 1255048b5e81SShri Abhyankar tmp_vec1[j] = 4; 125668785679SHong Zhang ++j; 12574d12350bSJunchao Zhang tmp_vec1[j] = nodesz - tmp_vec1[j - 1]; 125868785679SHong Zhang } else { 12594d12350bSJunchao Zhang tmp_vec1[j] = nodesz; 126068785679SHong Zhang } 126168785679SHong Zhang } 126268785679SHong Zhang /* Use the correct node_max */ 126368785679SHong Zhang node_max = j; 126468785679SHong Zhang 126568785679SHong Zhang /* Now reorder the inode info based on mat re-ordering info */ 126668785679SHong Zhang /* First create a row -> inode_size_array_index map */ 12679566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n + 1, &nsmap)); 12689566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(node_max + 1, &tmp_vec2)); 12694d12350bSJunchao Zhang tmp_vec2[0] = 0; 127068785679SHong Zhang for (i = 0, row = 0; i < node_max; i++) { 127168785679SHong Zhang nodesz = tmp_vec1[i]; 1272ad540459SPierre Jolivet for (j = 0; j < nodesz; j++, row++) nsmap[row] = i; 127368785679SHong Zhang } 127468785679SHong Zhang /* Using nsmap, create a reordered ns structure */ 127568785679SHong Zhang for (i = 0, j = 0; i < node_max; i++) { 127668785679SHong Zhang nodesz = tmp_vec1[nsmap[r[j]]]; /* here the reordered row_no is in r[] */ 12774d12350bSJunchao Zhang tmp_vec2[i + 1] = tmp_vec2[i] + nodesz; 127868785679SHong Zhang j += nodesz; 127968785679SHong Zhang } 12809566063dSJacob Faibussowitsch PetscCall(PetscFree(nsmap)); 12819566063dSJacob Faibussowitsch PetscCall(PetscFree(tmp_vec1)); 1282b89f182dSHong Zhang 128368785679SHong Zhang /* Now use the correct ns */ 128468785679SHong Zhang ns = tmp_vec2; 128568785679SHong Zhang 128628f1b45aSHong Zhang do { 128707b50cabSHong Zhang sctx.newshift = PETSC_FALSE; 128828f1b45aSHong Zhang /* Now loop over each block-row, and do the factorization */ 128928f1b45aSHong Zhang for (inod = 0, i = 0; inod < node_max; inod++) { /* i: row index; inod: inode index */ 12904d12350bSJunchao Zhang nodesz = ns[inod + 1] - ns[inod]; 129128f1b45aSHong Zhang 129228f1b45aSHong Zhang switch (nodesz) { 129328f1b45aSHong Zhang case 1: 1294b89f182dSHong Zhang /* zero rtmp1 */ 129528f1b45aSHong Zhang /* L part */ 129628f1b45aSHong Zhang nz = bi[i + 1] - bi[i]; 129728f1b45aSHong Zhang bjtmp = bj + bi[i]; 1298b89f182dSHong Zhang for (j = 0; j < nz; j++) rtmp1[bjtmp[j]] = 0.0; 129928f1b45aSHong Zhang 130028f1b45aSHong Zhang /* U part */ 130128f1b45aSHong Zhang nz = bdiag[i] - bdiag[i + 1]; 130228f1b45aSHong Zhang bjtmp = bj + bdiag[i + 1] + 1; 1303b89f182dSHong Zhang for (j = 0; j < nz; j++) rtmp1[bjtmp[j]] = 0.0; 130428f1b45aSHong Zhang 130528f1b45aSHong Zhang /* load in initial (unfactored row) */ 130628f1b45aSHong Zhang nz = ai[r[i] + 1] - ai[r[i]]; 130728f1b45aSHong Zhang ajtmp = aj + ai[r[i]]; 130828f1b45aSHong Zhang v = aa + ai[r[i]]; 13092205254eSKarl Rupp for (j = 0; j < nz; j++) rtmp1[ics[ajtmp[j]]] = v[j]; 13102205254eSKarl Rupp 131128f1b45aSHong Zhang /* ZeropivotApply() */ 1312b89f182dSHong Zhang rtmp1[i] += sctx.shift_amount; /* shift the diagonal of the matrix */ 131328f1b45aSHong Zhang 131428f1b45aSHong Zhang /* elimination */ 131528f1b45aSHong Zhang bjtmp = bj + bi[i]; 131628f1b45aSHong Zhang row = *bjtmp++; 131728f1b45aSHong Zhang nzL = bi[i + 1] - bi[i]; 131828f1b45aSHong Zhang for (k = 0; k < nzL; k++) { 1319b89f182dSHong Zhang pc = rtmp1 + row; 132028f1b45aSHong Zhang if (*pc != 0.0) { 132128f1b45aSHong Zhang pv = b->a + bdiag[row]; 1322b89f182dSHong Zhang mul1 = *pc * (*pv); 1323b89f182dSHong Zhang *pc = mul1; 132428f1b45aSHong Zhang pj = b->j + bdiag[row + 1] + 1; /* beginning of U(row,:) */ 132528f1b45aSHong Zhang pv = b->a + bdiag[row + 1] + 1; 132628f1b45aSHong Zhang nz = bdiag[row] - bdiag[row + 1] - 1; /* num of entries in U(row,:) excluding diag */ 1327b89f182dSHong Zhang for (j = 0; j < nz; j++) rtmp1[pj[j]] -= mul1 * pv[j]; 13289566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz)); 132928f1b45aSHong Zhang } 133028f1b45aSHong Zhang row = *bjtmp++; 133128f1b45aSHong Zhang } 133228f1b45aSHong Zhang 133328f1b45aSHong Zhang /* finished row so stick it into b->a */ 133428f1b45aSHong Zhang rs = 0.0; 133528f1b45aSHong Zhang /* L part */ 133628f1b45aSHong Zhang pv = b->a + bi[i]; 133728f1b45aSHong Zhang pj = b->j + bi[i]; 133828f1b45aSHong Zhang nz = bi[i + 1] - bi[i]; 133928f1b45aSHong Zhang for (j = 0; j < nz; j++) { 13409371c9d4SSatish Balay pv[j] = rtmp1[pj[j]]; 13419371c9d4SSatish Balay rs += PetscAbsScalar(pv[j]); 134228f1b45aSHong Zhang } 134328f1b45aSHong Zhang 134428f1b45aSHong Zhang /* U part */ 134528f1b45aSHong Zhang pv = b->a + bdiag[i + 1] + 1; 134628f1b45aSHong Zhang pj = b->j + bdiag[i + 1] + 1; 134728f1b45aSHong Zhang nz = bdiag[i] - bdiag[i + 1] - 1; 134828f1b45aSHong Zhang for (j = 0; j < nz; j++) { 13499371c9d4SSatish Balay pv[j] = rtmp1[pj[j]]; 13509371c9d4SSatish Balay rs += PetscAbsScalar(pv[j]); 135128f1b45aSHong Zhang } 135228f1b45aSHong Zhang 1353b89f182dSHong Zhang /* Check zero pivot */ 135428f1b45aSHong Zhang sctx.rs = rs; 1355b89f182dSHong Zhang sctx.pv = rtmp1[i]; 13569566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i)); 135707b50cabSHong Zhang if (sctx.newshift) break; 135828f1b45aSHong Zhang 1359a5b23f4aSJose E. Roman /* Mark diagonal and invert diagonal for simpler triangular solves */ 136028f1b45aSHong Zhang pv = b->a + bdiag[i]; 1361b89f182dSHong Zhang *pv = 1.0 / sctx.pv; /* sctx.pv = rtmp1[i]+shiftamount if shifttype==MAT_SHIFT_INBLOCKS */ 136228f1b45aSHong Zhang break; 136328f1b45aSHong Zhang 136428f1b45aSHong Zhang case 2: 1365b89f182dSHong Zhang /* zero rtmp1 and rtmp2 */ 136628f1b45aSHong Zhang /* L part */ 136728f1b45aSHong Zhang nz = bi[i + 1] - bi[i]; 136828f1b45aSHong Zhang bjtmp = bj + bi[i]; 136928f1b45aSHong Zhang for (j = 0; j < nz; j++) { 137068785679SHong Zhang col = bjtmp[j]; 13719371c9d4SSatish Balay rtmp1[col] = 0.0; 13729371c9d4SSatish Balay rtmp2[col] = 0.0; 137328f1b45aSHong Zhang } 137428f1b45aSHong Zhang 137528f1b45aSHong Zhang /* U part */ 137628f1b45aSHong Zhang nz = bdiag[i] - bdiag[i + 1]; 137728f1b45aSHong Zhang bjtmp = bj + bdiag[i + 1] + 1; 137828f1b45aSHong Zhang for (j = 0; j < nz; j++) { 137968785679SHong Zhang col = bjtmp[j]; 13809371c9d4SSatish Balay rtmp1[col] = 0.0; 13819371c9d4SSatish Balay rtmp2[col] = 0.0; 138228f1b45aSHong Zhang } 138328f1b45aSHong Zhang 138428f1b45aSHong Zhang /* load in initial (unfactored row) */ 138528f1b45aSHong Zhang nz = ai[r[i] + 1] - ai[r[i]]; 138628f1b45aSHong Zhang ajtmp = aj + ai[r[i]]; 13879371c9d4SSatish Balay v1 = aa + ai[r[i]]; 13889371c9d4SSatish Balay v2 = aa + ai[r[i] + 1]; 138928f1b45aSHong Zhang for (j = 0; j < nz; j++) { 139068785679SHong Zhang col = ics[ajtmp[j]]; 13919371c9d4SSatish Balay rtmp1[col] = v1[j]; 13929371c9d4SSatish Balay rtmp2[col] = v2[j]; 139328f1b45aSHong Zhang } 139428f1b45aSHong Zhang /* ZeropivotApply(): shift the diagonal of the matrix */ 13959371c9d4SSatish Balay rtmp1[i] += sctx.shift_amount; 13969371c9d4SSatish Balay rtmp2[i + 1] += sctx.shift_amount; 139728f1b45aSHong Zhang 139828f1b45aSHong Zhang /* elimination */ 139928f1b45aSHong Zhang bjtmp = bj + bi[i]; 140028f1b45aSHong Zhang row = *bjtmp++; /* pivot row */ 140128f1b45aSHong Zhang nzL = bi[i + 1] - bi[i]; 140228f1b45aSHong Zhang for (k = 0; k < nzL; k++) { 1403b89f182dSHong Zhang pc1 = rtmp1 + row; 1404b89f182dSHong Zhang pc2 = rtmp2 + row; 140528f1b45aSHong Zhang if (*pc1 != 0.0 || *pc2 != 0.0) { 140628f1b45aSHong Zhang pv = b->a + bdiag[row]; 14079371c9d4SSatish Balay mul1 = *pc1 * (*pv); 14089371c9d4SSatish Balay mul2 = *pc2 * (*pv); 14099371c9d4SSatish Balay *pc1 = mul1; 14109371c9d4SSatish Balay *pc2 = mul2; 141128f1b45aSHong Zhang 141228f1b45aSHong Zhang pj = b->j + bdiag[row + 1] + 1; /* beginning of U(row,:) */ 141328f1b45aSHong Zhang pv = b->a + bdiag[row + 1] + 1; 141428f1b45aSHong Zhang nz = bdiag[row] - bdiag[row + 1] - 1; /* num of entries in U(row,:) excluding diag */ 141528f1b45aSHong Zhang for (j = 0; j < nz; j++) { 141668785679SHong Zhang col = pj[j]; 1417b89f182dSHong Zhang rtmp1[col] -= mul1 * pv[j]; 1418b89f182dSHong Zhang rtmp2[col] -= mul2 * pv[j]; 141928f1b45aSHong Zhang } 14209566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2 + 4.0 * nz)); 142128f1b45aSHong Zhang } 142228f1b45aSHong Zhang row = *bjtmp++; 142328f1b45aSHong Zhang } 142428f1b45aSHong Zhang 1425b89f182dSHong Zhang /* finished row i; check zero pivot, then stick row i into b->a */ 142628f1b45aSHong Zhang rs = 0.0; 142728f1b45aSHong Zhang /* L part */ 1428b89f182dSHong Zhang pc1 = b->a + bi[i]; 142928f1b45aSHong Zhang pj = b->j + bi[i]; 143028f1b45aSHong Zhang nz = bi[i + 1] - bi[i]; 143128f1b45aSHong Zhang for (j = 0; j < nz; j++) { 143268785679SHong Zhang col = pj[j]; 14339371c9d4SSatish Balay pc1[j] = rtmp1[col]; 14349371c9d4SSatish Balay rs += PetscAbsScalar(pc1[j]); 143528f1b45aSHong Zhang } 143628f1b45aSHong Zhang /* U part */ 1437b89f182dSHong Zhang pc1 = b->a + bdiag[i + 1] + 1; 143828f1b45aSHong Zhang pj = b->j + bdiag[i + 1] + 1; 14390e7a5c2bSHong Zhang nz = bdiag[i] - bdiag[i + 1] - 1; /* exclude diagonal */ 144028f1b45aSHong Zhang for (j = 0; j < nz; j++) { 144168785679SHong Zhang col = pj[j]; 14429371c9d4SSatish Balay pc1[j] = rtmp1[col]; 14439371c9d4SSatish Balay rs += PetscAbsScalar(pc1[j]); 144428f1b45aSHong Zhang } 144528f1b45aSHong Zhang 144628f1b45aSHong Zhang sctx.rs = rs; 1447b89f182dSHong Zhang sctx.pv = rtmp1[i]; 14489566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i)); 144907b50cabSHong Zhang if (sctx.newshift) break; 1450b89f182dSHong Zhang pc1 = b->a + bdiag[i]; /* Mark diagonal */ 1451b89f182dSHong Zhang *pc1 = 1.0 / sctx.pv; 1452b89f182dSHong Zhang 1453b89f182dSHong Zhang /* Now take care of diagonal 2x2 block. */ 1454b89f182dSHong Zhang pc2 = rtmp2 + i; 1455b89f182dSHong Zhang if (*pc2 != 0.0) { 1456b89f182dSHong Zhang mul1 = (*pc2) * (*pc1); /* *pc1=diag[i] is inverted! */ 1457b89f182dSHong Zhang *pc2 = mul1; /* insert L entry */ 1458b89f182dSHong Zhang pj = b->j + bdiag[i + 1] + 1; /* beginning of U(i,:) */ 1459b89f182dSHong Zhang nz = bdiag[i] - bdiag[i + 1] - 1; /* num of entries in U(i,:) excluding diag */ 1460b89f182dSHong Zhang for (j = 0; j < nz; j++) { 14619371c9d4SSatish Balay col = pj[j]; 14629371c9d4SSatish Balay rtmp2[col] -= mul1 * rtmp1[col]; 146328f1b45aSHong Zhang } 14649566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz)); 1465b89f182dSHong Zhang } 1466b89f182dSHong Zhang 1467b89f182dSHong Zhang /* finished row i+1; check zero pivot, then stick row i+1 into b->a */ 1468b89f182dSHong Zhang rs = 0.0; 1469b89f182dSHong Zhang /* L part */ 1470b89f182dSHong Zhang pc2 = b->a + bi[i + 1]; 1471b89f182dSHong Zhang pj = b->j + bi[i + 1]; 1472b89f182dSHong Zhang nz = bi[i + 2] - bi[i + 1]; 1473b89f182dSHong Zhang for (j = 0; j < nz; j++) { 1474b89f182dSHong Zhang col = pj[j]; 14759371c9d4SSatish Balay pc2[j] = rtmp2[col]; 14769371c9d4SSatish Balay rs += PetscAbsScalar(pc2[j]); 1477b89f182dSHong Zhang } 1478b89f182dSHong Zhang /* U part */ 1479b89f182dSHong Zhang pc2 = b->a + bdiag[i + 2] + 1; 14800e7a5c2bSHong Zhang pj = b->j + bdiag[i + 2] + 1; 14810e7a5c2bSHong Zhang nz = bdiag[i + 1] - bdiag[i + 2] - 1; /* exclude diagonal */ 1482b89f182dSHong Zhang for (j = 0; j < nz; j++) { 1483b89f182dSHong Zhang col = pj[j]; 14849371c9d4SSatish Balay pc2[j] = rtmp2[col]; 14859371c9d4SSatish Balay rs += PetscAbsScalar(pc2[j]); 1486b89f182dSHong Zhang } 1487b89f182dSHong Zhang 148828f1b45aSHong Zhang sctx.rs = rs; 1489b89f182dSHong Zhang sctx.pv = rtmp2[i + 1]; 14909566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i + 1)); 149107b50cabSHong Zhang if (sctx.newshift) break; 149228f1b45aSHong Zhang pc2 = b->a + bdiag[i + 1]; 1493b89f182dSHong Zhang *pc2 = 1.0 / sctx.pv; 149428f1b45aSHong Zhang break; 1495b89f182dSHong Zhang 149668785679SHong Zhang case 3: 149768785679SHong Zhang /* zero rtmp */ 149868785679SHong Zhang /* L part */ 149968785679SHong Zhang nz = bi[i + 1] - bi[i]; 150068785679SHong Zhang bjtmp = bj + bi[i]; 150168785679SHong Zhang for (j = 0; j < nz; j++) { 150268785679SHong Zhang col = bjtmp[j]; 15039371c9d4SSatish Balay rtmp1[col] = 0.0; 15049371c9d4SSatish Balay rtmp2[col] = 0.0; 15059371c9d4SSatish Balay rtmp3[col] = 0.0; 150668785679SHong Zhang } 150768785679SHong Zhang 150868785679SHong Zhang /* U part */ 150968785679SHong Zhang nz = bdiag[i] - bdiag[i + 1]; 151068785679SHong Zhang bjtmp = bj + bdiag[i + 1] + 1; 151168785679SHong Zhang for (j = 0; j < nz; j++) { 151268785679SHong Zhang col = bjtmp[j]; 15139371c9d4SSatish Balay rtmp1[col] = 0.0; 15149371c9d4SSatish Balay rtmp2[col] = 0.0; 15159371c9d4SSatish Balay rtmp3[col] = 0.0; 151668785679SHong Zhang } 151768785679SHong Zhang 151868785679SHong Zhang /* load in initial (unfactored row) */ 151968785679SHong Zhang nz = ai[r[i] + 1] - ai[r[i]]; 152068785679SHong Zhang ajtmp = aj + ai[r[i]]; 15219371c9d4SSatish Balay v1 = aa + ai[r[i]]; 15229371c9d4SSatish Balay v2 = aa + ai[r[i] + 1]; 15239371c9d4SSatish Balay v3 = aa + ai[r[i] + 2]; 152468785679SHong Zhang for (j = 0; j < nz; j++) { 152568785679SHong Zhang col = ics[ajtmp[j]]; 15269371c9d4SSatish Balay rtmp1[col] = v1[j]; 15279371c9d4SSatish Balay rtmp2[col] = v2[j]; 15289371c9d4SSatish Balay rtmp3[col] = v3[j]; 152968785679SHong Zhang } 153068785679SHong Zhang /* ZeropivotApply(): shift the diagonal of the matrix */ 15319371c9d4SSatish Balay rtmp1[i] += sctx.shift_amount; 15329371c9d4SSatish Balay rtmp2[i + 1] += sctx.shift_amount; 15339371c9d4SSatish Balay rtmp3[i + 2] += sctx.shift_amount; 153468785679SHong Zhang 153568785679SHong Zhang /* elimination */ 153668785679SHong Zhang bjtmp = bj + bi[i]; 153768785679SHong Zhang row = *bjtmp++; /* pivot row */ 153868785679SHong Zhang nzL = bi[i + 1] - bi[i]; 153968785679SHong Zhang for (k = 0; k < nzL; k++) { 1540b89f182dSHong Zhang pc1 = rtmp1 + row; 1541b89f182dSHong Zhang pc2 = rtmp2 + row; 1542b89f182dSHong Zhang pc3 = rtmp3 + row; 154368785679SHong Zhang if (*pc1 != 0.0 || *pc2 != 0.0 || *pc3 != 0.0) { 154468785679SHong Zhang pv = b->a + bdiag[row]; 15459371c9d4SSatish Balay mul1 = *pc1 * (*pv); 15469371c9d4SSatish Balay mul2 = *pc2 * (*pv); 15479371c9d4SSatish Balay mul3 = *pc3 * (*pv); 15489371c9d4SSatish Balay *pc1 = mul1; 15499371c9d4SSatish Balay *pc2 = mul2; 15509371c9d4SSatish Balay *pc3 = mul3; 155168785679SHong Zhang 155268785679SHong Zhang pj = b->j + bdiag[row + 1] + 1; /* beginning of U(row,:) */ 155368785679SHong Zhang pv = b->a + bdiag[row + 1] + 1; 155468785679SHong Zhang nz = bdiag[row] - bdiag[row + 1] - 1; /* num of entries in U(row,:) excluding diag */ 155568785679SHong Zhang for (j = 0; j < nz; j++) { 155668785679SHong Zhang col = pj[j]; 1557b89f182dSHong Zhang rtmp1[col] -= mul1 * pv[j]; 1558b89f182dSHong Zhang rtmp2[col] -= mul2 * pv[j]; 1559b89f182dSHong Zhang rtmp3[col] -= mul3 * pv[j]; 156068785679SHong Zhang } 15619566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(3 + 6.0 * nz)); 156268785679SHong Zhang } 156368785679SHong Zhang row = *bjtmp++; 156468785679SHong Zhang } 156568785679SHong Zhang 1566b89f182dSHong Zhang /* finished row i; check zero pivot, then stick row i into b->a */ 1567b89f182dSHong Zhang rs = 0.0; 1568b89f182dSHong Zhang /* L part */ 1569b89f182dSHong Zhang pc1 = b->a + bi[i]; 1570b89f182dSHong Zhang pj = b->j + bi[i]; 1571b89f182dSHong Zhang nz = bi[i + 1] - bi[i]; 1572b89f182dSHong Zhang for (j = 0; j < nz; j++) { 1573b89f182dSHong Zhang col = pj[j]; 15749371c9d4SSatish Balay pc1[j] = rtmp1[col]; 15759371c9d4SSatish Balay rs += PetscAbsScalar(pc1[j]); 1576b89f182dSHong Zhang } 1577b89f182dSHong Zhang /* U part */ 1578b89f182dSHong Zhang pc1 = b->a + bdiag[i + 1] + 1; 1579b89f182dSHong Zhang pj = b->j + bdiag[i + 1] + 1; 15800e7a5c2bSHong Zhang nz = bdiag[i] - bdiag[i + 1] - 1; /* exclude diagonal */ 1581b89f182dSHong Zhang for (j = 0; j < nz; j++) { 1582b89f182dSHong Zhang col = pj[j]; 15839371c9d4SSatish Balay pc1[j] = rtmp1[col]; 15849371c9d4SSatish Balay rs += PetscAbsScalar(pc1[j]); 1585b89f182dSHong Zhang } 158668785679SHong Zhang 1587b89f182dSHong Zhang sctx.rs = rs; 1588b89f182dSHong Zhang sctx.pv = rtmp1[i]; 15899566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i)); 159007b50cabSHong Zhang if (sctx.newshift) break; 1591b89f182dSHong Zhang pc1 = b->a + bdiag[i]; /* Mark diag[i] */ 1592b89f182dSHong Zhang *pc1 = 1.0 / sctx.pv; 1593b89f182dSHong Zhang 1594b89f182dSHong Zhang /* Now take care of 1st column of diagonal 3x3 block. */ 1595b89f182dSHong Zhang pc2 = rtmp2 + i; 1596b89f182dSHong Zhang pc3 = rtmp3 + i; 1597b89f182dSHong Zhang if (*pc2 != 0.0 || *pc3 != 0.0) { 15989371c9d4SSatish Balay mul2 = (*pc2) * (*pc1); 15999371c9d4SSatish Balay *pc2 = mul2; 16009371c9d4SSatish Balay mul3 = (*pc3) * (*pc1); 16019371c9d4SSatish Balay *pc3 = mul3; 160268785679SHong Zhang pj = b->j + bdiag[i + 1] + 1; /* beginning of U(i,:) */ 160368785679SHong Zhang nz = bdiag[i] - bdiag[i + 1] - 1; /* num of entries in U(i,:) excluding diag */ 160468785679SHong Zhang for (j = 0; j < nz; j++) { 160568785679SHong Zhang col = pj[j]; 1606b89f182dSHong Zhang rtmp2[col] -= mul2 * rtmp1[col]; 1607b89f182dSHong Zhang rtmp3[col] -= mul3 * rtmp1[col]; 160868785679SHong Zhang } 16099566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2 + 4.0 * nz)); 161068785679SHong Zhang } 161168785679SHong Zhang 1612b89f182dSHong Zhang /* finished row i+1; check zero pivot, then stick row i+1 into b->a */ 1613b89f182dSHong Zhang rs = 0.0; 1614b89f182dSHong Zhang /* L part */ 1615b89f182dSHong Zhang pc2 = b->a + bi[i + 1]; 1616b89f182dSHong Zhang pj = b->j + bi[i + 1]; 1617b89f182dSHong Zhang nz = bi[i + 2] - bi[i + 1]; 1618b89f182dSHong Zhang for (j = 0; j < nz; j++) { 1619b89f182dSHong Zhang col = pj[j]; 16209371c9d4SSatish Balay pc2[j] = rtmp2[col]; 16219371c9d4SSatish Balay rs += PetscAbsScalar(pc2[j]); 1622b89f182dSHong Zhang } 1623b89f182dSHong Zhang /* U part */ 1624b89f182dSHong Zhang pc2 = b->a + bdiag[i + 2] + 1; 16250e7a5c2bSHong Zhang pj = b->j + bdiag[i + 2] + 1; 16260e7a5c2bSHong Zhang nz = bdiag[i + 1] - bdiag[i + 2] - 1; /* exclude diagonal */ 1627b89f182dSHong Zhang for (j = 0; j < nz; j++) { 1628b89f182dSHong Zhang col = pj[j]; 16299371c9d4SSatish Balay pc2[j] = rtmp2[col]; 16309371c9d4SSatish Balay rs += PetscAbsScalar(pc2[j]); 1631b89f182dSHong Zhang } 1632b89f182dSHong Zhang 1633b89f182dSHong Zhang sctx.rs = rs; 1634b89f182dSHong Zhang sctx.pv = rtmp2[i + 1]; 16359566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i + 1)); 163607b50cabSHong Zhang if (sctx.newshift) break; 1637b89f182dSHong Zhang pc2 = b->a + bdiag[i + 1]; 1638b89f182dSHong Zhang *pc2 = 1.0 / sctx.pv; /* Mark diag[i+1] */ 1639b89f182dSHong Zhang 1640b89f182dSHong Zhang /* Now take care of 2nd column of diagonal 3x3 block. */ 1641b89f182dSHong Zhang pc3 = rtmp3 + i + 1; 164268785679SHong Zhang if (*pc3 != 0.0) { 16439371c9d4SSatish Balay mul3 = (*pc3) * (*pc2); 16449371c9d4SSatish Balay *pc3 = mul3; 164568785679SHong Zhang pj = b->j + bdiag[i + 2] + 1; /* beginning of U(i+1,:) */ 164668785679SHong Zhang nz = bdiag[i + 1] - bdiag[i + 2] - 1; /* num of entries in U(i+1,:) excluding diag */ 164768785679SHong Zhang for (j = 0; j < nz; j++) { 164868785679SHong Zhang col = pj[j]; 1649b89f182dSHong Zhang rtmp3[col] -= mul3 * rtmp2[col]; 165068785679SHong Zhang } 16519566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz)); 165268785679SHong Zhang } 165368785679SHong Zhang 1654b89f182dSHong Zhang /* finished i+2; check zero pivot, then stick row i+2 into b->a */ 165568785679SHong Zhang rs = 0.0; 165668785679SHong Zhang /* L part */ 1657b89f182dSHong Zhang pc3 = b->a + bi[i + 2]; 1658b89f182dSHong Zhang pj = b->j + bi[i + 2]; 1659b89f182dSHong Zhang nz = bi[i + 3] - bi[i + 2]; 166068785679SHong Zhang for (j = 0; j < nz; j++) { 166168785679SHong Zhang col = pj[j]; 16629371c9d4SSatish Balay pc3[j] = rtmp3[col]; 16639371c9d4SSatish Balay rs += PetscAbsScalar(pc3[j]); 166468785679SHong Zhang } 166568785679SHong Zhang /* U part */ 1666b89f182dSHong Zhang pc3 = b->a + bdiag[i + 3] + 1; 16670e7a5c2bSHong Zhang pj = b->j + bdiag[i + 3] + 1; 16680e7a5c2bSHong Zhang nz = bdiag[i + 2] - bdiag[i + 3] - 1; /* exclude diagonal */ 166968785679SHong Zhang for (j = 0; j < nz; j++) { 167068785679SHong Zhang col = pj[j]; 16719371c9d4SSatish Balay pc3[j] = rtmp3[col]; 16729371c9d4SSatish Balay rs += PetscAbsScalar(pc3[j]); 167368785679SHong Zhang } 167468785679SHong Zhang 167568785679SHong Zhang sctx.rs = rs; 1676b89f182dSHong Zhang sctx.pv = rtmp3[i + 2]; 16779566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i + 2)); 167807b50cabSHong Zhang if (sctx.newshift) break; 167968785679SHong Zhang pc3 = b->a + bdiag[i + 2]; 1680b89f182dSHong Zhang *pc3 = 1.0 / sctx.pv; /* Mark diag[i+2] */ 168168785679SHong Zhang break; 16829877982aSShri Abhyankar case 4: 16839877982aSShri Abhyankar /* zero rtmp */ 16849877982aSShri Abhyankar /* L part */ 16859877982aSShri Abhyankar nz = bi[i + 1] - bi[i]; 16869877982aSShri Abhyankar bjtmp = bj + bi[i]; 16879877982aSShri Abhyankar for (j = 0; j < nz; j++) { 16889877982aSShri Abhyankar col = bjtmp[j]; 16899371c9d4SSatish Balay rtmp1[col] = 0.0; 16909371c9d4SSatish Balay rtmp2[col] = 0.0; 16919371c9d4SSatish Balay rtmp3[col] = 0.0; 16929371c9d4SSatish Balay rtmp4[col] = 0.0; 16939877982aSShri Abhyankar } 16949877982aSShri Abhyankar 16959877982aSShri Abhyankar /* U part */ 16969877982aSShri Abhyankar nz = bdiag[i] - bdiag[i + 1]; 16979877982aSShri Abhyankar bjtmp = bj + bdiag[i + 1] + 1; 16989877982aSShri Abhyankar for (j = 0; j < nz; j++) { 16999877982aSShri Abhyankar col = bjtmp[j]; 17009371c9d4SSatish Balay rtmp1[col] = 0.0; 17019371c9d4SSatish Balay rtmp2[col] = 0.0; 17029371c9d4SSatish Balay rtmp3[col] = 0.0; 17039371c9d4SSatish Balay rtmp4[col] = 0.0; 17049877982aSShri Abhyankar } 17059877982aSShri Abhyankar 17069877982aSShri Abhyankar /* load in initial (unfactored row) */ 17079877982aSShri Abhyankar nz = ai[r[i] + 1] - ai[r[i]]; 17089877982aSShri Abhyankar ajtmp = aj + ai[r[i]]; 17099371c9d4SSatish Balay v1 = aa + ai[r[i]]; 17109371c9d4SSatish Balay v2 = aa + ai[r[i] + 1]; 17119371c9d4SSatish Balay v3 = aa + ai[r[i] + 2]; 17129371c9d4SSatish Balay v4 = aa + ai[r[i] + 3]; 17139877982aSShri Abhyankar for (j = 0; j < nz; j++) { 17149877982aSShri Abhyankar col = ics[ajtmp[j]]; 17159371c9d4SSatish Balay rtmp1[col] = v1[j]; 17169371c9d4SSatish Balay rtmp2[col] = v2[j]; 17179371c9d4SSatish Balay rtmp3[col] = v3[j]; 17189371c9d4SSatish Balay rtmp4[col] = v4[j]; 17199877982aSShri Abhyankar } 17209877982aSShri Abhyankar /* ZeropivotApply(): shift the diagonal of the matrix */ 17219371c9d4SSatish Balay rtmp1[i] += sctx.shift_amount; 17229371c9d4SSatish Balay rtmp2[i + 1] += sctx.shift_amount; 17239371c9d4SSatish Balay rtmp3[i + 2] += sctx.shift_amount; 17249371c9d4SSatish Balay rtmp4[i + 3] += sctx.shift_amount; 17259877982aSShri Abhyankar 17269877982aSShri Abhyankar /* elimination */ 17279877982aSShri Abhyankar bjtmp = bj + bi[i]; 17289877982aSShri Abhyankar row = *bjtmp++; /* pivot row */ 17299877982aSShri Abhyankar nzL = bi[i + 1] - bi[i]; 17309877982aSShri Abhyankar for (k = 0; k < nzL; k++) { 17319877982aSShri Abhyankar pc1 = rtmp1 + row; 17329877982aSShri Abhyankar pc2 = rtmp2 + row; 17339877982aSShri Abhyankar pc3 = rtmp3 + row; 17349877982aSShri Abhyankar pc4 = rtmp4 + row; 17359877982aSShri Abhyankar if (*pc1 != 0.0 || *pc2 != 0.0 || *pc3 != 0.0 || *pc4 != 0.0) { 17369877982aSShri Abhyankar pv = b->a + bdiag[row]; 17379371c9d4SSatish Balay mul1 = *pc1 * (*pv); 17389371c9d4SSatish Balay mul2 = *pc2 * (*pv); 17399371c9d4SSatish Balay mul3 = *pc3 * (*pv); 17409371c9d4SSatish Balay mul4 = *pc4 * (*pv); 17419371c9d4SSatish Balay *pc1 = mul1; 17429371c9d4SSatish Balay *pc2 = mul2; 17439371c9d4SSatish Balay *pc3 = mul3; 17449371c9d4SSatish Balay *pc4 = mul4; 17459877982aSShri Abhyankar 17469877982aSShri Abhyankar pj = b->j + bdiag[row + 1] + 1; /* beginning of U(row,:) */ 17479877982aSShri Abhyankar pv = b->a + bdiag[row + 1] + 1; 17489877982aSShri Abhyankar nz = bdiag[row] - bdiag[row + 1] - 1; /* num of entries in U(row,:) excluding diag */ 17499877982aSShri Abhyankar for (j = 0; j < nz; j++) { 17509877982aSShri Abhyankar col = pj[j]; 17519877982aSShri Abhyankar rtmp1[col] -= mul1 * pv[j]; 17529877982aSShri Abhyankar rtmp2[col] -= mul2 * pv[j]; 17539877982aSShri Abhyankar rtmp3[col] -= mul3 * pv[j]; 17549877982aSShri Abhyankar rtmp4[col] -= mul4 * pv[j]; 17559877982aSShri Abhyankar } 17569566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(4 + 8.0 * nz)); 17579877982aSShri Abhyankar } 17589877982aSShri Abhyankar row = *bjtmp++; 17599877982aSShri Abhyankar } 17609877982aSShri Abhyankar 17619877982aSShri Abhyankar /* finished row i; check zero pivot, then stick row i into b->a */ 17629877982aSShri Abhyankar rs = 0.0; 17639877982aSShri Abhyankar /* L part */ 17649877982aSShri Abhyankar pc1 = b->a + bi[i]; 17659877982aSShri Abhyankar pj = b->j + bi[i]; 17669877982aSShri Abhyankar nz = bi[i + 1] - bi[i]; 17679877982aSShri Abhyankar for (j = 0; j < nz; j++) { 17689877982aSShri Abhyankar col = pj[j]; 17699371c9d4SSatish Balay pc1[j] = rtmp1[col]; 17709371c9d4SSatish Balay rs += PetscAbsScalar(pc1[j]); 17719877982aSShri Abhyankar } 17729877982aSShri Abhyankar /* U part */ 17739877982aSShri Abhyankar pc1 = b->a + bdiag[i + 1] + 1; 17749877982aSShri Abhyankar pj = b->j + bdiag[i + 1] + 1; 17759877982aSShri Abhyankar nz = bdiag[i] - bdiag[i + 1] - 1; /* exclude diagonal */ 17769877982aSShri Abhyankar for (j = 0; j < nz; j++) { 17779877982aSShri Abhyankar col = pj[j]; 17789371c9d4SSatish Balay pc1[j] = rtmp1[col]; 17799371c9d4SSatish Balay rs += PetscAbsScalar(pc1[j]); 17809877982aSShri Abhyankar } 17819877982aSShri Abhyankar 17829877982aSShri Abhyankar sctx.rs = rs; 17839877982aSShri Abhyankar sctx.pv = rtmp1[i]; 17849566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i)); 178507b50cabSHong Zhang if (sctx.newshift) break; 17869877982aSShri Abhyankar pc1 = b->a + bdiag[i]; /* Mark diag[i] */ 17879877982aSShri Abhyankar *pc1 = 1.0 / sctx.pv; 17889877982aSShri Abhyankar 17899877982aSShri Abhyankar /* Now take care of 1st column of diagonal 4x4 block. */ 17909877982aSShri Abhyankar pc2 = rtmp2 + i; 17919877982aSShri Abhyankar pc3 = rtmp3 + i; 17929877982aSShri Abhyankar pc4 = rtmp4 + i; 17939877982aSShri Abhyankar if (*pc2 != 0.0 || *pc3 != 0.0 || *pc4 != 0.0) { 17949371c9d4SSatish Balay mul2 = (*pc2) * (*pc1); 17959371c9d4SSatish Balay *pc2 = mul2; 17969371c9d4SSatish Balay mul3 = (*pc3) * (*pc1); 17979371c9d4SSatish Balay *pc3 = mul3; 17989371c9d4SSatish Balay mul4 = (*pc4) * (*pc1); 17999371c9d4SSatish Balay *pc4 = mul4; 18009877982aSShri Abhyankar pj = b->j + bdiag[i + 1] + 1; /* beginning of U(i,:) */ 18019877982aSShri Abhyankar nz = bdiag[i] - bdiag[i + 1] - 1; /* num of entries in U(i,:) excluding diag */ 18029877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18039877982aSShri Abhyankar col = pj[j]; 18049877982aSShri Abhyankar rtmp2[col] -= mul2 * rtmp1[col]; 18059877982aSShri Abhyankar rtmp3[col] -= mul3 * rtmp1[col]; 18069877982aSShri Abhyankar rtmp4[col] -= mul4 * rtmp1[col]; 18079877982aSShri Abhyankar } 18089566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(3 + 6.0 * nz)); 18099877982aSShri Abhyankar } 18109877982aSShri Abhyankar 18119877982aSShri Abhyankar /* finished row i+1; check zero pivot, then stick row i+1 into b->a */ 18129877982aSShri Abhyankar rs = 0.0; 18139877982aSShri Abhyankar /* L part */ 18149877982aSShri Abhyankar pc2 = b->a + bi[i + 1]; 18159877982aSShri Abhyankar pj = b->j + bi[i + 1]; 18169877982aSShri Abhyankar nz = bi[i + 2] - bi[i + 1]; 18179877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18189877982aSShri Abhyankar col = pj[j]; 18199371c9d4SSatish Balay pc2[j] = rtmp2[col]; 18209371c9d4SSatish Balay rs += PetscAbsScalar(pc2[j]); 18219877982aSShri Abhyankar } 18229877982aSShri Abhyankar /* U part */ 18239877982aSShri Abhyankar pc2 = b->a + bdiag[i + 2] + 1; 18249877982aSShri Abhyankar pj = b->j + bdiag[i + 2] + 1; 18259877982aSShri Abhyankar nz = bdiag[i + 1] - bdiag[i + 2] - 1; /* exclude diagonal */ 18269877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18279877982aSShri Abhyankar col = pj[j]; 18289371c9d4SSatish Balay pc2[j] = rtmp2[col]; 18299371c9d4SSatish Balay rs += PetscAbsScalar(pc2[j]); 18309877982aSShri Abhyankar } 18319877982aSShri Abhyankar 18329877982aSShri Abhyankar sctx.rs = rs; 18339877982aSShri Abhyankar sctx.pv = rtmp2[i + 1]; 18349566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i + 1)); 183507b50cabSHong Zhang if (sctx.newshift) break; 18369877982aSShri Abhyankar pc2 = b->a + bdiag[i + 1]; 18379877982aSShri Abhyankar *pc2 = 1.0 / sctx.pv; /* Mark diag[i+1] */ 18389877982aSShri Abhyankar 18399877982aSShri Abhyankar /* Now take care of 2nd column of diagonal 4x4 block. */ 18409877982aSShri Abhyankar pc3 = rtmp3 + i + 1; 18419877982aSShri Abhyankar pc4 = rtmp4 + i + 1; 18429877982aSShri Abhyankar if (*pc3 != 0.0 || *pc4 != 0.0) { 18439371c9d4SSatish Balay mul3 = (*pc3) * (*pc2); 18449371c9d4SSatish Balay *pc3 = mul3; 18459371c9d4SSatish Balay mul4 = (*pc4) * (*pc2); 18469371c9d4SSatish Balay *pc4 = mul4; 18479877982aSShri Abhyankar pj = b->j + bdiag[i + 2] + 1; /* beginning of U(i+1,:) */ 18489877982aSShri Abhyankar nz = bdiag[i + 1] - bdiag[i + 2] - 1; /* num of entries in U(i+1,:) excluding diag */ 18499877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18509877982aSShri Abhyankar col = pj[j]; 18519877982aSShri Abhyankar rtmp3[col] -= mul3 * rtmp2[col]; 18529877982aSShri Abhyankar rtmp4[col] -= mul4 * rtmp2[col]; 18539877982aSShri Abhyankar } 18549566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(4.0 * nz)); 18559877982aSShri Abhyankar } 18569877982aSShri Abhyankar 18579877982aSShri Abhyankar /* finished i+2; check zero pivot, then stick row i+2 into b->a */ 18589877982aSShri Abhyankar rs = 0.0; 18599877982aSShri Abhyankar /* L part */ 18609877982aSShri Abhyankar pc3 = b->a + bi[i + 2]; 18619877982aSShri Abhyankar pj = b->j + bi[i + 2]; 18629877982aSShri Abhyankar nz = bi[i + 3] - bi[i + 2]; 18639877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18649877982aSShri Abhyankar col = pj[j]; 18659371c9d4SSatish Balay pc3[j] = rtmp3[col]; 18669371c9d4SSatish Balay rs += PetscAbsScalar(pc3[j]); 18679877982aSShri Abhyankar } 18689877982aSShri Abhyankar /* U part */ 18699877982aSShri Abhyankar pc3 = b->a + bdiag[i + 3] + 1; 18709877982aSShri Abhyankar pj = b->j + bdiag[i + 3] + 1; 18719877982aSShri Abhyankar nz = bdiag[i + 2] - bdiag[i + 3] - 1; /* exclude diagonal */ 18729877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18739877982aSShri Abhyankar col = pj[j]; 18749371c9d4SSatish Balay pc3[j] = rtmp3[col]; 18759371c9d4SSatish Balay rs += PetscAbsScalar(pc3[j]); 18769877982aSShri Abhyankar } 18779877982aSShri Abhyankar 18789877982aSShri Abhyankar sctx.rs = rs; 18799877982aSShri Abhyankar sctx.pv = rtmp3[i + 2]; 18809566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i + 2)); 188107b50cabSHong Zhang if (sctx.newshift) break; 18829877982aSShri Abhyankar pc3 = b->a + bdiag[i + 2]; 18839877982aSShri Abhyankar *pc3 = 1.0 / sctx.pv; /* Mark diag[i+2] */ 18849877982aSShri Abhyankar 18859877982aSShri Abhyankar /* Now take care of 3rd column of diagonal 4x4 block. */ 18869877982aSShri Abhyankar pc4 = rtmp4 + i + 2; 18879877982aSShri Abhyankar if (*pc4 != 0.0) { 18889371c9d4SSatish Balay mul4 = (*pc4) * (*pc3); 18899371c9d4SSatish Balay *pc4 = mul4; 18909877982aSShri Abhyankar pj = b->j + bdiag[i + 3] + 1; /* beginning of U(i+2,:) */ 18919877982aSShri Abhyankar nz = bdiag[i + 2] - bdiag[i + 3] - 1; /* num of entries in U(i+2,:) excluding diag */ 18929877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18939877982aSShri Abhyankar col = pj[j]; 18949877982aSShri Abhyankar rtmp4[col] -= mul4 * rtmp3[col]; 18959877982aSShri Abhyankar } 18969566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz)); 18979877982aSShri Abhyankar } 18989877982aSShri Abhyankar 18999877982aSShri Abhyankar /* finished i+3; check zero pivot, then stick row i+3 into b->a */ 19009877982aSShri Abhyankar rs = 0.0; 19019877982aSShri Abhyankar /* L part */ 19029877982aSShri Abhyankar pc4 = b->a + bi[i + 3]; 19039877982aSShri Abhyankar pj = b->j + bi[i + 3]; 19049877982aSShri Abhyankar nz = bi[i + 4] - bi[i + 3]; 19059877982aSShri Abhyankar for (j = 0; j < nz; j++) { 19069877982aSShri Abhyankar col = pj[j]; 19079371c9d4SSatish Balay pc4[j] = rtmp4[col]; 19089371c9d4SSatish Balay rs += PetscAbsScalar(pc4[j]); 19099877982aSShri Abhyankar } 19109877982aSShri Abhyankar /* U part */ 19119877982aSShri Abhyankar pc4 = b->a + bdiag[i + 4] + 1; 19129877982aSShri Abhyankar pj = b->j + bdiag[i + 4] + 1; 19139877982aSShri Abhyankar nz = bdiag[i + 3] - bdiag[i + 4] - 1; /* exclude diagonal */ 19149877982aSShri Abhyankar for (j = 0; j < nz; j++) { 19159877982aSShri Abhyankar col = pj[j]; 19169371c9d4SSatish Balay pc4[j] = rtmp4[col]; 19179371c9d4SSatish Balay rs += PetscAbsScalar(pc4[j]); 19189877982aSShri Abhyankar } 19199877982aSShri Abhyankar 19209877982aSShri Abhyankar sctx.rs = rs; 19219877982aSShri Abhyankar sctx.pv = rtmp4[i + 3]; 19229566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i + 3)); 192307b50cabSHong Zhang if (sctx.newshift) break; 19249877982aSShri Abhyankar pc4 = b->a + bdiag[i + 3]; 19259877982aSShri Abhyankar *pc4 = 1.0 / sctx.pv; /* Mark diag[i+3] */ 19269877982aSShri Abhyankar break; 192768785679SHong Zhang 1928d71ae5a4SJacob Faibussowitsch default: 1929d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Node size not yet supported "); 193028f1b45aSHong Zhang } 1931c2b86aeeSHong Zhang if (sctx.newshift) break; /* break for (inod=0,i=0; inod<node_max; inod++) */ 193228f1b45aSHong Zhang i += nodesz; /* Update the row */ 193368785679SHong Zhang } 193428f1b45aSHong Zhang 193528f1b45aSHong Zhang /* MatPivotRefine() */ 193607b50cabSHong Zhang if (info->shifttype == (PetscReal)MAT_SHIFT_POSITIVE_DEFINITE && !sctx.newshift && sctx.shift_fraction > 0 && sctx.nshift < sctx.nshift_max) { 193728f1b45aSHong Zhang /* 193828f1b45aSHong Zhang * if no shift in this attempt & shifting & started shifting & can refine, 193928f1b45aSHong Zhang * then try lower shift 194028f1b45aSHong Zhang */ 194128f1b45aSHong Zhang sctx.shift_hi = sctx.shift_fraction; 194228f1b45aSHong Zhang sctx.shift_fraction = (sctx.shift_hi + sctx.shift_lo) / 2.; 194328f1b45aSHong Zhang sctx.shift_amount = sctx.shift_fraction * sctx.shift_top; 194407b50cabSHong Zhang sctx.newshift = PETSC_TRUE; 194528f1b45aSHong Zhang sctx.nshift++; 194628f1b45aSHong Zhang } 194707b50cabSHong Zhang } while (sctx.newshift); 194828f1b45aSHong Zhang 19499566063dSJacob Faibussowitsch PetscCall(PetscFree4(rtmp1, rtmp2, rtmp3, rtmp4)); 19509566063dSJacob Faibussowitsch PetscCall(PetscFree(tmp_vec2)); 19519566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isicol, &ic)); 19529566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &r)); 195328f1b45aSHong Zhang 19544d12350bSJunchao Zhang if (b->inode.size_csr) { 1955abb87a52SBarry Smith C->ops->solve = MatSolve_SeqAIJ_Inode; 1956abb87a52SBarry Smith } else { 1957d3ac4fa3SBarry Smith C->ops->solve = MatSolve_SeqAIJ; 1958abb87a52SBarry Smith } 195928f1b45aSHong Zhang C->ops->solveadd = MatSolveAdd_SeqAIJ; 196028f1b45aSHong Zhang C->ops->solvetranspose = MatSolveTranspose_SeqAIJ; 196128f1b45aSHong Zhang C->ops->solvetransposeadd = MatSolveTransposeAdd_SeqAIJ; 196228f1b45aSHong Zhang C->ops->matsolve = MatMatSolve_SeqAIJ; 1963a3d9026eSPierre Jolivet C->ops->matsolvetranspose = MatMatSolveTranspose_SeqAIJ; 196428f1b45aSHong Zhang C->assembled = PETSC_TRUE; 196528f1b45aSHong Zhang C->preallocated = PETSC_TRUE; 19662205254eSKarl Rupp 19679566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(C->cmap->n)); 196828f1b45aSHong Zhang 196928f1b45aSHong Zhang /* MatShiftView(A,info,&sctx) */ 197028f1b45aSHong Zhang if (sctx.nshift) { 1971f4db908eSBarry Smith if (info->shifttype == (PetscReal)MAT_SHIFT_POSITIVE_DEFINITE) { 19729566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "number of shift_pd tries %" PetscInt_FMT ", shift_amount %g, diagonal shifted up by %e fraction top_value %e\n", sctx.nshift, (double)sctx.shift_amount, (double)sctx.shift_fraction, (double)sctx.shift_top)); 1973f4db908eSBarry Smith } else if (info->shifttype == (PetscReal)MAT_SHIFT_NONZERO) { 19749566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "number of shift_nz tries %" PetscInt_FMT ", shift_amount %g\n", sctx.nshift, (double)sctx.shift_amount)); 1975f4db908eSBarry Smith } else if (info->shifttype == (PetscReal)MAT_SHIFT_INBLOCKS) { 19769566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "number of shift_inblocks applied %" PetscInt_FMT ", each shift_amount %g\n", sctx.nshift, (double)info->shiftamount)); 197728f1b45aSHong Zhang } 197828f1b45aSHong Zhang } 19793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 198028f1b45aSHong Zhang } 1981628f99d7SShri Abhyankar 1982ff6a9541SJacob Faibussowitsch #if 0 1983ff6a9541SJacob Faibussowitsch // unused 1984ff6a9541SJacob Faibussowitsch static PetscErrorCode MatLUFactorNumeric_SeqAIJ_Inode_inplace(Mat B, Mat A, const MatFactorInfo *info) 1985d71ae5a4SJacob Faibussowitsch { 1986628f99d7SShri Abhyankar Mat C = B; 1987628f99d7SShri Abhyankar Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data, *b = (Mat_SeqAIJ *)C->data; 1988628f99d7SShri Abhyankar IS iscol = b->col, isrow = b->row, isicol = b->icol; 1989628f99d7SShri Abhyankar const PetscInt *r, *ic, *c, *ics; 1990628f99d7SShri Abhyankar PetscInt n = A->rmap->n, *bi = b->i; 1991628f99d7SShri Abhyankar PetscInt *bj = b->j, *nbj = b->j + 1, *ajtmp, *bjtmp, nz, nz_tmp, row, prow; 19928758e1faSBarry Smith PetscInt i, j, idx, *bd = b->diag, node_max, nodesz; 19938758e1faSBarry Smith PetscInt *ai = a->i, *aj = a->j; 1994628f99d7SShri Abhyankar PetscInt *ns, *tmp_vec1, *tmp_vec2, *nsmap, *pj; 1995628f99d7SShri Abhyankar PetscScalar mul1, mul2, mul3, tmp; 1996628f99d7SShri Abhyankar MatScalar *pc1, *pc2, *pc3, *ba = b->a, *pv, *rtmp11, *rtmp22, *rtmp33; 1997628f99d7SShri Abhyankar const MatScalar *v1, *v2, *v3, *aa = a->a, *rtmp1; 1998628f99d7SShri Abhyankar PetscReal rs = 0.0; 1999628f99d7SShri Abhyankar FactorShiftCtx sctx; 2000628f99d7SShri Abhyankar 2001628f99d7SShri Abhyankar PetscFunctionBegin; 2002628f99d7SShri Abhyankar sctx.shift_top = 0; 2003628f99d7SShri Abhyankar sctx.nshift_max = 0; 2004628f99d7SShri Abhyankar sctx.shift_lo = 0; 2005628f99d7SShri Abhyankar sctx.shift_hi = 0; 2006628f99d7SShri Abhyankar sctx.shift_fraction = 0; 2007628f99d7SShri Abhyankar 2008628f99d7SShri Abhyankar /* if both shift schemes are chosen by user, only use info->shiftpd */ 2009f4db908eSBarry Smith if (info->shifttype == (PetscReal)MAT_SHIFT_POSITIVE_DEFINITE) { /* set sctx.shift_top=max{rs} */ 2010628f99d7SShri Abhyankar sctx.shift_top = 0; 2011628f99d7SShri Abhyankar for (i = 0; i < n; i++) { 2012628f99d7SShri Abhyankar /* calculate rs = sum(|aij|)-RealPart(aii), amt of shift needed for this row */ 2013628f99d7SShri Abhyankar rs = 0.0; 2014628f99d7SShri Abhyankar ajtmp = aj + ai[i]; 2015628f99d7SShri Abhyankar rtmp1 = aa + ai[i]; 2016628f99d7SShri Abhyankar nz = ai[i + 1] - ai[i]; 2017628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2018628f99d7SShri Abhyankar if (*ajtmp != i) { 2019628f99d7SShri Abhyankar rs += PetscAbsScalar(*rtmp1++); 2020628f99d7SShri Abhyankar } else { 2021628f99d7SShri Abhyankar rs -= PetscRealPart(*rtmp1++); 2022628f99d7SShri Abhyankar } 2023628f99d7SShri Abhyankar ajtmp++; 2024628f99d7SShri Abhyankar } 2025628f99d7SShri Abhyankar if (rs > sctx.shift_top) sctx.shift_top = rs; 2026628f99d7SShri Abhyankar } 2027628f99d7SShri Abhyankar if (sctx.shift_top == 0.0) sctx.shift_top += 1.e-12; 2028628f99d7SShri Abhyankar sctx.shift_top *= 1.1; 2029628f99d7SShri Abhyankar sctx.nshift_max = 5; 2030628f99d7SShri Abhyankar sctx.shift_lo = 0.; 2031628f99d7SShri Abhyankar sctx.shift_hi = 1.; 2032628f99d7SShri Abhyankar } 2033628f99d7SShri Abhyankar sctx.shift_amount = 0; 2034628f99d7SShri Abhyankar sctx.nshift = 0; 2035628f99d7SShri Abhyankar 20369566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &r)); 20379566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol, &c)); 20389566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isicol, &ic)); 20399566063dSJacob Faibussowitsch PetscCall(PetscCalloc3(n, &rtmp11, n, &rtmp22, n, &rtmp33)); 2040628f99d7SShri Abhyankar ics = ic; 2041628f99d7SShri Abhyankar 2042628f99d7SShri Abhyankar node_max = a->inode.node_count; 2043628f99d7SShri Abhyankar ns = a->inode.size; 204428b400f6SJacob Faibussowitsch PetscCheck(ns, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Matrix without inode information"); 2045628f99d7SShri Abhyankar 2046628f99d7SShri Abhyankar /* If max inode size > 3, split it into two inodes.*/ 2047628f99d7SShri Abhyankar /* also map the inode sizes according to the ordering */ 20489566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n + 1, &tmp_vec1)); 2049628f99d7SShri Abhyankar for (i = 0, j = 0; i < node_max; ++i, ++j) { 2050628f99d7SShri Abhyankar if (ns[i] > 3) { 2051628f99d7SShri Abhyankar tmp_vec1[j] = ns[i] / 2; /* Assuming ns[i] < =5 */ 2052628f99d7SShri Abhyankar ++j; 2053628f99d7SShri Abhyankar tmp_vec1[j] = ns[i] - tmp_vec1[j - 1]; 2054628f99d7SShri Abhyankar } else { 2055628f99d7SShri Abhyankar tmp_vec1[j] = ns[i]; 2056628f99d7SShri Abhyankar } 2057628f99d7SShri Abhyankar } 2058628f99d7SShri Abhyankar /* Use the correct node_max */ 2059628f99d7SShri Abhyankar node_max = j; 2060628f99d7SShri Abhyankar 2061628f99d7SShri Abhyankar /* Now reorder the inode info based on mat re-ordering info */ 2062628f99d7SShri Abhyankar /* First create a row -> inode_size_array_index map */ 20639566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(n + 1, &nsmap, node_max + 1, &tmp_vec2)); 2064628f99d7SShri Abhyankar for (i = 0, row = 0; i < node_max; i++) { 2065628f99d7SShri Abhyankar nodesz = tmp_vec1[i]; 2066ad540459SPierre Jolivet for (j = 0; j < nodesz; j++, row++) nsmap[row] = i; 2067628f99d7SShri Abhyankar } 2068628f99d7SShri Abhyankar /* Using nsmap, create a reordered ns structure */ 2069628f99d7SShri Abhyankar for (i = 0, j = 0; i < node_max; i++) { 2070628f99d7SShri Abhyankar nodesz = tmp_vec1[nsmap[r[j]]]; /* here the reordered row_no is in r[] */ 2071628f99d7SShri Abhyankar tmp_vec2[i] = nodesz; 2072628f99d7SShri Abhyankar j += nodesz; 2073628f99d7SShri Abhyankar } 20749566063dSJacob Faibussowitsch PetscCall(PetscFree2(nsmap, tmp_vec1)); 2075628f99d7SShri Abhyankar /* Now use the correct ns */ 2076628f99d7SShri Abhyankar ns = tmp_vec2; 2077628f99d7SShri Abhyankar 2078628f99d7SShri Abhyankar do { 207907b50cabSHong Zhang sctx.newshift = PETSC_FALSE; 2080628f99d7SShri Abhyankar /* Now loop over each block-row, and do the factorization */ 2081628f99d7SShri Abhyankar for (i = 0, row = 0; i < node_max; i++) { 2082628f99d7SShri Abhyankar nodesz = ns[i]; 2083628f99d7SShri Abhyankar nz = bi[row + 1] - bi[row]; 2084628f99d7SShri Abhyankar bjtmp = bj + bi[row]; 2085628f99d7SShri Abhyankar 2086628f99d7SShri Abhyankar switch (nodesz) { 2087628f99d7SShri Abhyankar case 1: 2088628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2089628f99d7SShri Abhyankar idx = bjtmp[j]; 2090628f99d7SShri Abhyankar rtmp11[idx] = 0.0; 2091628f99d7SShri Abhyankar } 2092628f99d7SShri Abhyankar 2093628f99d7SShri Abhyankar /* load in initial (unfactored row) */ 2094628f99d7SShri Abhyankar idx = r[row]; 2095628f99d7SShri Abhyankar nz_tmp = ai[idx + 1] - ai[idx]; 2096628f99d7SShri Abhyankar ajtmp = aj + ai[idx]; 2097628f99d7SShri Abhyankar v1 = aa + ai[idx]; 2098628f99d7SShri Abhyankar 2099628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2100628f99d7SShri Abhyankar idx = ics[ajtmp[j]]; 2101628f99d7SShri Abhyankar rtmp11[idx] = v1[j]; 2102628f99d7SShri Abhyankar } 2103628f99d7SShri Abhyankar rtmp11[ics[r[row]]] += sctx.shift_amount; 2104628f99d7SShri Abhyankar 2105628f99d7SShri Abhyankar prow = *bjtmp++; 2106628f99d7SShri Abhyankar while (prow < row) { 2107628f99d7SShri Abhyankar pc1 = rtmp11 + prow; 2108628f99d7SShri Abhyankar if (*pc1 != 0.0) { 2109628f99d7SShri Abhyankar pv = ba + bd[prow]; 2110628f99d7SShri Abhyankar pj = nbj + bd[prow]; 2111628f99d7SShri Abhyankar mul1 = *pc1 * *pv++; 2112628f99d7SShri Abhyankar *pc1 = mul1; 2113628f99d7SShri Abhyankar nz_tmp = bi[prow + 1] - bd[prow] - 1; 21149566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz_tmp)); 2115628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2116628f99d7SShri Abhyankar tmp = pv[j]; 2117628f99d7SShri Abhyankar idx = pj[j]; 2118628f99d7SShri Abhyankar rtmp11[idx] -= mul1 * tmp; 2119628f99d7SShri Abhyankar } 2120628f99d7SShri Abhyankar } 2121628f99d7SShri Abhyankar prow = *bjtmp++; 2122628f99d7SShri Abhyankar } 2123628f99d7SShri Abhyankar pj = bj + bi[row]; 2124628f99d7SShri Abhyankar pc1 = ba + bi[row]; 2125628f99d7SShri Abhyankar 2126628f99d7SShri Abhyankar sctx.pv = rtmp11[row]; 2127628f99d7SShri Abhyankar rtmp11[row] = 1.0 / rtmp11[row]; /* invert diag */ 2128628f99d7SShri Abhyankar rs = 0.0; 2129628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2130628f99d7SShri Abhyankar idx = pj[j]; 2131628f99d7SShri Abhyankar pc1[j] = rtmp11[idx]; /* rtmp11 -> ba */ 2132628f99d7SShri Abhyankar if (idx != row) rs += PetscAbsScalar(pc1[j]); 2133628f99d7SShri Abhyankar } 2134628f99d7SShri Abhyankar sctx.rs = rs; 21359566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, row)); 213607b50cabSHong Zhang if (sctx.newshift) goto endofwhile; 2137628f99d7SShri Abhyankar break; 2138628f99d7SShri Abhyankar 2139628f99d7SShri Abhyankar case 2: 2140628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2141628f99d7SShri Abhyankar idx = bjtmp[j]; 2142628f99d7SShri Abhyankar rtmp11[idx] = 0.0; 2143628f99d7SShri Abhyankar rtmp22[idx] = 0.0; 2144628f99d7SShri Abhyankar } 2145628f99d7SShri Abhyankar 2146628f99d7SShri Abhyankar /* load in initial (unfactored row) */ 2147628f99d7SShri Abhyankar idx = r[row]; 2148628f99d7SShri Abhyankar nz_tmp = ai[idx + 1] - ai[idx]; 2149628f99d7SShri Abhyankar ajtmp = aj + ai[idx]; 2150628f99d7SShri Abhyankar v1 = aa + ai[idx]; 2151628f99d7SShri Abhyankar v2 = aa + ai[idx + 1]; 2152628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2153628f99d7SShri Abhyankar idx = ics[ajtmp[j]]; 2154628f99d7SShri Abhyankar rtmp11[idx] = v1[j]; 2155628f99d7SShri Abhyankar rtmp22[idx] = v2[j]; 2156628f99d7SShri Abhyankar } 2157628f99d7SShri Abhyankar rtmp11[ics[r[row]]] += sctx.shift_amount; 2158628f99d7SShri Abhyankar rtmp22[ics[r[row + 1]]] += sctx.shift_amount; 2159628f99d7SShri Abhyankar 2160628f99d7SShri Abhyankar prow = *bjtmp++; 2161628f99d7SShri Abhyankar while (prow < row) { 2162628f99d7SShri Abhyankar pc1 = rtmp11 + prow; 2163628f99d7SShri Abhyankar pc2 = rtmp22 + prow; 2164628f99d7SShri Abhyankar if (*pc1 != 0.0 || *pc2 != 0.0) { 2165628f99d7SShri Abhyankar pv = ba + bd[prow]; 2166628f99d7SShri Abhyankar pj = nbj + bd[prow]; 2167628f99d7SShri Abhyankar mul1 = *pc1 * *pv; 2168628f99d7SShri Abhyankar mul2 = *pc2 * *pv; 2169628f99d7SShri Abhyankar ++pv; 2170628f99d7SShri Abhyankar *pc1 = mul1; 2171628f99d7SShri Abhyankar *pc2 = mul2; 2172628f99d7SShri Abhyankar 2173628f99d7SShri Abhyankar nz_tmp = bi[prow + 1] - bd[prow] - 1; 2174628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2175628f99d7SShri Abhyankar tmp = pv[j]; 2176628f99d7SShri Abhyankar idx = pj[j]; 2177628f99d7SShri Abhyankar rtmp11[idx] -= mul1 * tmp; 2178628f99d7SShri Abhyankar rtmp22[idx] -= mul2 * tmp; 2179628f99d7SShri Abhyankar } 21809566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2 + 4.0 * nz_tmp)); 2181628f99d7SShri Abhyankar } 2182628f99d7SShri Abhyankar prow = *bjtmp++; 2183628f99d7SShri Abhyankar } 2184628f99d7SShri Abhyankar 2185628f99d7SShri Abhyankar /* Now take care of diagonal 2x2 block. Note: prow = row here */ 2186628f99d7SShri Abhyankar pc1 = rtmp11 + prow; 2187628f99d7SShri Abhyankar pc2 = rtmp22 + prow; 2188628f99d7SShri Abhyankar 2189628f99d7SShri Abhyankar sctx.pv = *pc1; 2190628f99d7SShri Abhyankar pj = bj + bi[prow]; 2191628f99d7SShri Abhyankar rs = 0.0; 2192628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2193628f99d7SShri Abhyankar idx = pj[j]; 2194628f99d7SShri Abhyankar if (idx != prow) rs += PetscAbsScalar(rtmp11[idx]); 2195628f99d7SShri Abhyankar } 2196628f99d7SShri Abhyankar sctx.rs = rs; 21979566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, row)); 219807b50cabSHong Zhang if (sctx.newshift) goto endofwhile; 2199628f99d7SShri Abhyankar 2200628f99d7SShri Abhyankar if (*pc2 != 0.0) { 2201628f99d7SShri Abhyankar pj = nbj + bd[prow]; 2202628f99d7SShri Abhyankar mul2 = (*pc2) / (*pc1); /* since diag is not yet inverted.*/ 2203628f99d7SShri Abhyankar *pc2 = mul2; 2204628f99d7SShri Abhyankar nz_tmp = bi[prow + 1] - bd[prow] - 1; 2205628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2206628f99d7SShri Abhyankar idx = pj[j]; 2207628f99d7SShri Abhyankar tmp = rtmp11[idx]; 2208628f99d7SShri Abhyankar rtmp22[idx] -= mul2 * tmp; 2209628f99d7SShri Abhyankar } 22109566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz_tmp)); 2211628f99d7SShri Abhyankar } 2212628f99d7SShri Abhyankar 2213628f99d7SShri Abhyankar pj = bj + bi[row]; 2214628f99d7SShri Abhyankar pc1 = ba + bi[row]; 2215628f99d7SShri Abhyankar pc2 = ba + bi[row + 1]; 2216628f99d7SShri Abhyankar 2217628f99d7SShri Abhyankar sctx.pv = rtmp22[row + 1]; 2218628f99d7SShri Abhyankar rs = 0.0; 2219628f99d7SShri Abhyankar rtmp11[row] = 1.0 / rtmp11[row]; 2220628f99d7SShri Abhyankar rtmp22[row + 1] = 1.0 / rtmp22[row + 1]; 2221628f99d7SShri Abhyankar /* copy row entries from dense representation to sparse */ 2222628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2223628f99d7SShri Abhyankar idx = pj[j]; 2224628f99d7SShri Abhyankar pc1[j] = rtmp11[idx]; 2225628f99d7SShri Abhyankar pc2[j] = rtmp22[idx]; 2226628f99d7SShri Abhyankar if (idx != row + 1) rs += PetscAbsScalar(pc2[j]); 2227628f99d7SShri Abhyankar } 2228628f99d7SShri Abhyankar sctx.rs = rs; 22299566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, row + 1)); 223007b50cabSHong Zhang if (sctx.newshift) goto endofwhile; 2231628f99d7SShri Abhyankar break; 2232628f99d7SShri Abhyankar 2233628f99d7SShri Abhyankar case 3: 2234628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2235628f99d7SShri Abhyankar idx = bjtmp[j]; 2236628f99d7SShri Abhyankar rtmp11[idx] = 0.0; 2237628f99d7SShri Abhyankar rtmp22[idx] = 0.0; 2238628f99d7SShri Abhyankar rtmp33[idx] = 0.0; 2239628f99d7SShri Abhyankar } 2240628f99d7SShri Abhyankar /* copy the nonzeros for the 3 rows from sparse representation to dense in rtmp*[] */ 2241628f99d7SShri Abhyankar idx = r[row]; 2242628f99d7SShri Abhyankar nz_tmp = ai[idx + 1] - ai[idx]; 2243628f99d7SShri Abhyankar ajtmp = aj + ai[idx]; 2244628f99d7SShri Abhyankar v1 = aa + ai[idx]; 2245628f99d7SShri Abhyankar v2 = aa + ai[idx + 1]; 2246628f99d7SShri Abhyankar v3 = aa + ai[idx + 2]; 2247628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2248628f99d7SShri Abhyankar idx = ics[ajtmp[j]]; 2249628f99d7SShri Abhyankar rtmp11[idx] = v1[j]; 2250628f99d7SShri Abhyankar rtmp22[idx] = v2[j]; 2251628f99d7SShri Abhyankar rtmp33[idx] = v3[j]; 2252628f99d7SShri Abhyankar } 2253628f99d7SShri Abhyankar rtmp11[ics[r[row]]] += sctx.shift_amount; 2254628f99d7SShri Abhyankar rtmp22[ics[r[row + 1]]] += sctx.shift_amount; 2255628f99d7SShri Abhyankar rtmp33[ics[r[row + 2]]] += sctx.shift_amount; 2256628f99d7SShri Abhyankar 2257628f99d7SShri Abhyankar /* loop over all pivot row blocks above this row block */ 2258628f99d7SShri Abhyankar prow = *bjtmp++; 2259628f99d7SShri Abhyankar while (prow < row) { 2260628f99d7SShri Abhyankar pc1 = rtmp11 + prow; 2261628f99d7SShri Abhyankar pc2 = rtmp22 + prow; 2262628f99d7SShri Abhyankar pc3 = rtmp33 + prow; 2263628f99d7SShri Abhyankar if (*pc1 != 0.0 || *pc2 != 0.0 || *pc3 != 0.0) { 2264628f99d7SShri Abhyankar pv = ba + bd[prow]; 2265628f99d7SShri Abhyankar pj = nbj + bd[prow]; 2266628f99d7SShri Abhyankar mul1 = *pc1 * *pv; 2267628f99d7SShri Abhyankar mul2 = *pc2 * *pv; 2268628f99d7SShri Abhyankar mul3 = *pc3 * *pv; 2269628f99d7SShri Abhyankar ++pv; 2270628f99d7SShri Abhyankar *pc1 = mul1; 2271628f99d7SShri Abhyankar *pc2 = mul2; 2272628f99d7SShri Abhyankar *pc3 = mul3; 2273628f99d7SShri Abhyankar 2274628f99d7SShri Abhyankar nz_tmp = bi[prow + 1] - bd[prow] - 1; 2275628f99d7SShri Abhyankar /* update this row based on pivot row */ 2276628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2277628f99d7SShri Abhyankar tmp = pv[j]; 2278628f99d7SShri Abhyankar idx = pj[j]; 2279628f99d7SShri Abhyankar rtmp11[idx] -= mul1 * tmp; 2280628f99d7SShri Abhyankar rtmp22[idx] -= mul2 * tmp; 2281628f99d7SShri Abhyankar rtmp33[idx] -= mul3 * tmp; 2282628f99d7SShri Abhyankar } 22839566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(3 + 6.0 * nz_tmp)); 2284628f99d7SShri Abhyankar } 2285628f99d7SShri Abhyankar prow = *bjtmp++; 2286628f99d7SShri Abhyankar } 2287628f99d7SShri Abhyankar 2288628f99d7SShri Abhyankar /* Now take care of diagonal 3x3 block in this set of rows */ 2289628f99d7SShri Abhyankar /* note: prow = row here */ 2290628f99d7SShri Abhyankar pc1 = rtmp11 + prow; 2291628f99d7SShri Abhyankar pc2 = rtmp22 + prow; 2292628f99d7SShri Abhyankar pc3 = rtmp33 + prow; 2293628f99d7SShri Abhyankar 2294628f99d7SShri Abhyankar sctx.pv = *pc1; 2295628f99d7SShri Abhyankar pj = bj + bi[prow]; 2296628f99d7SShri Abhyankar rs = 0.0; 2297628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2298628f99d7SShri Abhyankar idx = pj[j]; 2299628f99d7SShri Abhyankar if (idx != row) rs += PetscAbsScalar(rtmp11[idx]); 2300628f99d7SShri Abhyankar } 2301628f99d7SShri Abhyankar sctx.rs = rs; 23029566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, row)); 230307b50cabSHong Zhang if (sctx.newshift) goto endofwhile; 2304628f99d7SShri Abhyankar 2305628f99d7SShri Abhyankar if (*pc2 != 0.0 || *pc3 != 0.0) { 2306628f99d7SShri Abhyankar mul2 = (*pc2) / (*pc1); 2307628f99d7SShri Abhyankar mul3 = (*pc3) / (*pc1); 2308628f99d7SShri Abhyankar *pc2 = mul2; 2309628f99d7SShri Abhyankar *pc3 = mul3; 2310628f99d7SShri Abhyankar nz_tmp = bi[prow + 1] - bd[prow] - 1; 2311628f99d7SShri Abhyankar pj = nbj + bd[prow]; 2312628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2313628f99d7SShri Abhyankar idx = pj[j]; 2314628f99d7SShri Abhyankar tmp = rtmp11[idx]; 2315628f99d7SShri Abhyankar rtmp22[idx] -= mul2 * tmp; 2316628f99d7SShri Abhyankar rtmp33[idx] -= mul3 * tmp; 2317628f99d7SShri Abhyankar } 23189566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2 + 4.0 * nz_tmp)); 2319628f99d7SShri Abhyankar } 2320628f99d7SShri Abhyankar ++prow; 2321628f99d7SShri Abhyankar 2322628f99d7SShri Abhyankar pc2 = rtmp22 + prow; 2323628f99d7SShri Abhyankar pc3 = rtmp33 + prow; 2324628f99d7SShri Abhyankar sctx.pv = *pc2; 2325628f99d7SShri Abhyankar pj = bj + bi[prow]; 2326628f99d7SShri Abhyankar rs = 0.0; 2327628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2328628f99d7SShri Abhyankar idx = pj[j]; 2329628f99d7SShri Abhyankar if (idx != prow) rs += PetscAbsScalar(rtmp22[idx]); 2330628f99d7SShri Abhyankar } 2331628f99d7SShri Abhyankar sctx.rs = rs; 23329566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, row + 1)); 233307b50cabSHong Zhang if (sctx.newshift) goto endofwhile; 2334628f99d7SShri Abhyankar 2335628f99d7SShri Abhyankar if (*pc3 != 0.0) { 2336628f99d7SShri Abhyankar mul3 = (*pc3) / (*pc2); 2337628f99d7SShri Abhyankar *pc3 = mul3; 2338628f99d7SShri Abhyankar pj = nbj + bd[prow]; 2339628f99d7SShri Abhyankar nz_tmp = bi[prow + 1] - bd[prow] - 1; 2340628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2341628f99d7SShri Abhyankar idx = pj[j]; 2342628f99d7SShri Abhyankar tmp = rtmp22[idx]; 2343628f99d7SShri Abhyankar rtmp33[idx] -= mul3 * tmp; 2344628f99d7SShri Abhyankar } 23459566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz_tmp)); 2346628f99d7SShri Abhyankar } 2347628f99d7SShri Abhyankar 2348628f99d7SShri Abhyankar pj = bj + bi[row]; 2349628f99d7SShri Abhyankar pc1 = ba + bi[row]; 2350628f99d7SShri Abhyankar pc2 = ba + bi[row + 1]; 2351628f99d7SShri Abhyankar pc3 = ba + bi[row + 2]; 2352628f99d7SShri Abhyankar 2353628f99d7SShri Abhyankar sctx.pv = rtmp33[row + 2]; 2354628f99d7SShri Abhyankar rs = 0.0; 2355628f99d7SShri Abhyankar rtmp11[row] = 1.0 / rtmp11[row]; 2356628f99d7SShri Abhyankar rtmp22[row + 1] = 1.0 / rtmp22[row + 1]; 2357628f99d7SShri Abhyankar rtmp33[row + 2] = 1.0 / rtmp33[row + 2]; 2358628f99d7SShri Abhyankar /* copy row entries from dense representation to sparse */ 2359628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2360628f99d7SShri Abhyankar idx = pj[j]; 2361628f99d7SShri Abhyankar pc1[j] = rtmp11[idx]; 2362628f99d7SShri Abhyankar pc2[j] = rtmp22[idx]; 2363628f99d7SShri Abhyankar pc3[j] = rtmp33[idx]; 2364628f99d7SShri Abhyankar if (idx != row + 2) rs += PetscAbsScalar(pc3[j]); 2365628f99d7SShri Abhyankar } 2366628f99d7SShri Abhyankar 2367628f99d7SShri Abhyankar sctx.rs = rs; 23689566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, row + 2)); 236907b50cabSHong Zhang if (sctx.newshift) goto endofwhile; 2370628f99d7SShri Abhyankar break; 2371628f99d7SShri Abhyankar 2372d71ae5a4SJacob Faibussowitsch default: 2373d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Node size not yet supported "); 2374628f99d7SShri Abhyankar } 2375628f99d7SShri Abhyankar row += nodesz; /* Update the row */ 2376628f99d7SShri Abhyankar } 2377628f99d7SShri Abhyankar endofwhile:; 237807b50cabSHong Zhang } while (sctx.newshift); 23799566063dSJacob Faibussowitsch PetscCall(PetscFree3(rtmp11, rtmp22, rtmp33)); 23809566063dSJacob Faibussowitsch PetscCall(PetscFree(tmp_vec2)); 23819566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isicol, &ic)); 23829566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &r)); 23839566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol, &c)); 23842205254eSKarl Rupp 2385d3ac4fa3SBarry Smith (B)->ops->solve = MatSolve_SeqAIJ_inplace; 2386628f99d7SShri Abhyankar /* do not set solve add, since MatSolve_Inode + Add is faster */ 2387628f99d7SShri Abhyankar C->ops->solvetranspose = MatSolveTranspose_SeqAIJ_inplace; 2388628f99d7SShri Abhyankar C->ops->solvetransposeadd = MatSolveTransposeAdd_SeqAIJ_inplace; 2389628f99d7SShri Abhyankar C->assembled = PETSC_TRUE; 2390628f99d7SShri Abhyankar C->preallocated = PETSC_TRUE; 2391628f99d7SShri Abhyankar if (sctx.nshift) { 2392f4db908eSBarry Smith if (info->shifttype == (PetscReal)MAT_SHIFT_POSITIVE_DEFINITE) { 23939566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "number of shift_pd tries %" PetscInt_FMT ", shift_amount %g, diagonal shifted up by %e fraction top_value %e\n", sctx.nshift, (double)sctx.shift_amount, (double)sctx.shift_fraction, (double)sctx.shift_top)); 2394f4db908eSBarry Smith } else if (info->shifttype == (PetscReal)MAT_SHIFT_NONZERO) { 23959566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "number of shift_nz tries %" PetscInt_FMT ", shift_amount %g\n", sctx.nshift, (double)sctx.shift_amount)); 2396628f99d7SShri Abhyankar } 2397628f99d7SShri Abhyankar } 23989566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(C->cmap->n)); 23999566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCheckInode(C)); 24003ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2401628f99d7SShri Abhyankar } 2402ff6a9541SJacob Faibussowitsch #endif 2403628f99d7SShri Abhyankar 2404d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSolve_SeqAIJ_Inode(Mat A, Vec bb, Vec xx) 2405d71ae5a4SJacob Faibussowitsch { 2406019b515eSShri Abhyankar Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 2407019b515eSShri Abhyankar IS iscol = a->col, isrow = a->row; 2408019b515eSShri Abhyankar const PetscInt *r, *c, *rout, *cout; 24094d12350bSJunchao Zhang PetscInt i, j; 24108758e1faSBarry Smith PetscInt node_max, row, nsz, aii, i0, i1, nz; 24118758e1faSBarry Smith const PetscInt *ai = a->i, *a_j = a->j, *ns, *vi, *ad, *aj; 2412019b515eSShri Abhyankar PetscScalar *x, *tmp, *tmps, tmp0, tmp1; 2413019b515eSShri Abhyankar PetscScalar sum1, sum2, sum3, sum4, sum5; 2414019b515eSShri Abhyankar const MatScalar *v1, *v2, *v3, *v4, *v5, *a_a = a->a, *aa; 2415019b515eSShri Abhyankar const PetscScalar *b; 2416019b515eSShri Abhyankar 2417019b515eSShri Abhyankar PetscFunctionBegin; 24184d12350bSJunchao Zhang PetscCheck(a->inode.size_csr, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 2419019b515eSShri Abhyankar node_max = a->inode.node_count; 24204d12350bSJunchao Zhang ns = a->inode.size_csr; /* Node Size array */ 2421019b515eSShri Abhyankar 24229566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(bb, &b)); 24239566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(xx, &x)); 2424019b515eSShri Abhyankar tmp = a->solve_work; 2425019b515eSShri Abhyankar 24269371c9d4SSatish Balay PetscCall(ISGetIndices(isrow, &rout)); 24279371c9d4SSatish Balay r = rout; 24289371c9d4SSatish Balay PetscCall(ISGetIndices(iscol, &cout)); 24299371c9d4SSatish Balay c = cout; 2430019b515eSShri Abhyankar 2431019b515eSShri Abhyankar /* forward solve the lower triangular */ 2432019b515eSShri Abhyankar tmps = tmp; 2433019b515eSShri Abhyankar aa = a_a; 2434019b515eSShri Abhyankar aj = a_j; 2435019b515eSShri Abhyankar ad = a->diag; 2436019b515eSShri Abhyankar 24374d12350bSJunchao Zhang for (i = 0; i < node_max; ++i) { 24384d12350bSJunchao Zhang row = ns[i]; 24394d12350bSJunchao Zhang nsz = ns[i + 1] - ns[i]; 2440019b515eSShri Abhyankar aii = ai[row]; 2441019b515eSShri Abhyankar v1 = aa + aii; 2442019b515eSShri Abhyankar vi = aj + aii; 2443019b515eSShri Abhyankar nz = ai[row + 1] - ai[row]; 2444019b515eSShri Abhyankar 244598991853SShri Abhyankar if (i < node_max - 1) { 244698991853SShri Abhyankar /* Prefetch the indices for the next block */ 244750d8bf02SJed Brown PetscPrefetchBlock(aj + ai[row + nsz], ai[row + nsz + 1] - ai[row + nsz], 0, PETSC_PREFETCH_HINT_NTA); /* indices */ 244898991853SShri Abhyankar /* Prefetch the data for the next block */ 24494d12350bSJunchao Zhang PetscPrefetchBlock(aa + ai[row + nsz], ai[ns[i + 2]] - ai[row + nsz], 0, PETSC_PREFETCH_HINT_NTA); 245098991853SShri Abhyankar } 245198991853SShri Abhyankar 2452019b515eSShri Abhyankar switch (nsz) { /* Each loop in 'case' is unrolled */ 2453019b515eSShri Abhyankar case 1: 2454019b515eSShri Abhyankar sum1 = b[r[row]]; 2455019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2456019b515eSShri Abhyankar i0 = vi[j]; 2457019b515eSShri Abhyankar i1 = vi[j + 1]; 2458019b515eSShri Abhyankar tmp0 = tmps[i0]; 2459019b515eSShri Abhyankar tmp1 = tmps[i1]; 2460019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2461019b515eSShri Abhyankar } 2462019b515eSShri Abhyankar if (j == nz - 1) { 2463019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2464019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2465019b515eSShri Abhyankar } 2466019b515eSShri Abhyankar tmp[row++] = sum1; 2467019b515eSShri Abhyankar break; 2468019b515eSShri Abhyankar case 2: 2469019b515eSShri Abhyankar sum1 = b[r[row]]; 2470019b515eSShri Abhyankar sum2 = b[r[row + 1]]; 2471019b515eSShri Abhyankar v2 = aa + ai[row + 1]; 2472019b515eSShri Abhyankar 2473019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2474019b515eSShri Abhyankar i0 = vi[j]; 2475019b515eSShri Abhyankar i1 = vi[j + 1]; 2476019b515eSShri Abhyankar tmp0 = tmps[i0]; 2477019b515eSShri Abhyankar tmp1 = tmps[i1]; 2478019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2479019b515eSShri Abhyankar sum2 -= v2[j] * tmp0 + v2[j + 1] * tmp1; 2480019b515eSShri Abhyankar } 2481019b515eSShri Abhyankar if (j == nz - 1) { 2482019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2483019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2484019b515eSShri Abhyankar sum2 -= v2[j] * tmp0; 2485019b515eSShri Abhyankar } 2486019b515eSShri Abhyankar sum2 -= v2[nz] * sum1; 2487019b515eSShri Abhyankar tmp[row++] = sum1; 2488019b515eSShri Abhyankar tmp[row++] = sum2; 2489019b515eSShri Abhyankar break; 2490019b515eSShri Abhyankar case 3: 2491019b515eSShri Abhyankar sum1 = b[r[row]]; 2492019b515eSShri Abhyankar sum2 = b[r[row + 1]]; 2493019b515eSShri Abhyankar sum3 = b[r[row + 2]]; 2494019b515eSShri Abhyankar v2 = aa + ai[row + 1]; 2495019b515eSShri Abhyankar v3 = aa + ai[row + 2]; 2496019b515eSShri Abhyankar 2497019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2498019b515eSShri Abhyankar i0 = vi[j]; 2499019b515eSShri Abhyankar i1 = vi[j + 1]; 2500019b515eSShri Abhyankar tmp0 = tmps[i0]; 2501019b515eSShri Abhyankar tmp1 = tmps[i1]; 2502019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2503019b515eSShri Abhyankar sum2 -= v2[j] * tmp0 + v2[j + 1] * tmp1; 2504019b515eSShri Abhyankar sum3 -= v3[j] * tmp0 + v3[j + 1] * tmp1; 2505019b515eSShri Abhyankar } 2506019b515eSShri Abhyankar if (j == nz - 1) { 2507019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2508019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2509019b515eSShri Abhyankar sum2 -= v2[j] * tmp0; 2510019b515eSShri Abhyankar sum3 -= v3[j] * tmp0; 2511019b515eSShri Abhyankar } 2512019b515eSShri Abhyankar sum2 -= v2[nz] * sum1; 2513019b515eSShri Abhyankar sum3 -= v3[nz] * sum1; 2514019b515eSShri Abhyankar sum3 -= v3[nz + 1] * sum2; 2515019b515eSShri Abhyankar tmp[row++] = sum1; 2516019b515eSShri Abhyankar tmp[row++] = sum2; 2517019b515eSShri Abhyankar tmp[row++] = sum3; 2518019b515eSShri Abhyankar break; 2519019b515eSShri Abhyankar 2520019b515eSShri Abhyankar case 4: 2521019b515eSShri Abhyankar sum1 = b[r[row]]; 2522019b515eSShri Abhyankar sum2 = b[r[row + 1]]; 2523019b515eSShri Abhyankar sum3 = b[r[row + 2]]; 2524019b515eSShri Abhyankar sum4 = b[r[row + 3]]; 2525019b515eSShri Abhyankar v2 = aa + ai[row + 1]; 2526019b515eSShri Abhyankar v3 = aa + ai[row + 2]; 2527019b515eSShri Abhyankar v4 = aa + ai[row + 3]; 2528019b515eSShri Abhyankar 2529019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2530019b515eSShri Abhyankar i0 = vi[j]; 2531019b515eSShri Abhyankar i1 = vi[j + 1]; 2532019b515eSShri Abhyankar tmp0 = tmps[i0]; 2533019b515eSShri Abhyankar tmp1 = tmps[i1]; 2534019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2535019b515eSShri Abhyankar sum2 -= v2[j] * tmp0 + v2[j + 1] * tmp1; 2536019b515eSShri Abhyankar sum3 -= v3[j] * tmp0 + v3[j + 1] * tmp1; 2537019b515eSShri Abhyankar sum4 -= v4[j] * tmp0 + v4[j + 1] * tmp1; 2538019b515eSShri Abhyankar } 2539019b515eSShri Abhyankar if (j == nz - 1) { 2540019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2541019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2542019b515eSShri Abhyankar sum2 -= v2[j] * tmp0; 2543019b515eSShri Abhyankar sum3 -= v3[j] * tmp0; 2544019b515eSShri Abhyankar sum4 -= v4[j] * tmp0; 2545019b515eSShri Abhyankar } 2546019b515eSShri Abhyankar sum2 -= v2[nz] * sum1; 2547019b515eSShri Abhyankar sum3 -= v3[nz] * sum1; 2548019b515eSShri Abhyankar sum4 -= v4[nz] * sum1; 2549019b515eSShri Abhyankar sum3 -= v3[nz + 1] * sum2; 2550019b515eSShri Abhyankar sum4 -= v4[nz + 1] * sum2; 2551019b515eSShri Abhyankar sum4 -= v4[nz + 2] * sum3; 2552019b515eSShri Abhyankar 2553019b515eSShri Abhyankar tmp[row++] = sum1; 2554019b515eSShri Abhyankar tmp[row++] = sum2; 2555019b515eSShri Abhyankar tmp[row++] = sum3; 2556019b515eSShri Abhyankar tmp[row++] = sum4; 2557019b515eSShri Abhyankar break; 2558019b515eSShri Abhyankar case 5: 2559019b515eSShri Abhyankar sum1 = b[r[row]]; 2560019b515eSShri Abhyankar sum2 = b[r[row + 1]]; 2561019b515eSShri Abhyankar sum3 = b[r[row + 2]]; 2562019b515eSShri Abhyankar sum4 = b[r[row + 3]]; 2563019b515eSShri Abhyankar sum5 = b[r[row + 4]]; 2564019b515eSShri Abhyankar v2 = aa + ai[row + 1]; 2565019b515eSShri Abhyankar v3 = aa + ai[row + 2]; 2566019b515eSShri Abhyankar v4 = aa + ai[row + 3]; 2567019b515eSShri Abhyankar v5 = aa + ai[row + 4]; 2568019b515eSShri Abhyankar 2569019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2570019b515eSShri Abhyankar i0 = vi[j]; 2571019b515eSShri Abhyankar i1 = vi[j + 1]; 2572019b515eSShri Abhyankar tmp0 = tmps[i0]; 2573019b515eSShri Abhyankar tmp1 = tmps[i1]; 2574019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2575019b515eSShri Abhyankar sum2 -= v2[j] * tmp0 + v2[j + 1] * tmp1; 2576019b515eSShri Abhyankar sum3 -= v3[j] * tmp0 + v3[j + 1] * tmp1; 2577019b515eSShri Abhyankar sum4 -= v4[j] * tmp0 + v4[j + 1] * tmp1; 2578019b515eSShri Abhyankar sum5 -= v5[j] * tmp0 + v5[j + 1] * tmp1; 2579019b515eSShri Abhyankar } 2580019b515eSShri Abhyankar if (j == nz - 1) { 2581019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2582019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2583019b515eSShri Abhyankar sum2 -= v2[j] * tmp0; 2584019b515eSShri Abhyankar sum3 -= v3[j] * tmp0; 2585019b515eSShri Abhyankar sum4 -= v4[j] * tmp0; 2586019b515eSShri Abhyankar sum5 -= v5[j] * tmp0; 2587019b515eSShri Abhyankar } 2588019b515eSShri Abhyankar 2589019b515eSShri Abhyankar sum2 -= v2[nz] * sum1; 2590019b515eSShri Abhyankar sum3 -= v3[nz] * sum1; 2591019b515eSShri Abhyankar sum4 -= v4[nz] * sum1; 2592019b515eSShri Abhyankar sum5 -= v5[nz] * sum1; 2593019b515eSShri Abhyankar sum3 -= v3[nz + 1] * sum2; 2594019b515eSShri Abhyankar sum4 -= v4[nz + 1] * sum2; 2595019b515eSShri Abhyankar sum5 -= v5[nz + 1] * sum2; 2596019b515eSShri Abhyankar sum4 -= v4[nz + 2] * sum3; 2597019b515eSShri Abhyankar sum5 -= v5[nz + 2] * sum3; 2598019b515eSShri Abhyankar sum5 -= v5[nz + 3] * sum4; 2599019b515eSShri Abhyankar 2600019b515eSShri Abhyankar tmp[row++] = sum1; 2601019b515eSShri Abhyankar tmp[row++] = sum2; 2602019b515eSShri Abhyankar tmp[row++] = sum3; 2603019b515eSShri Abhyankar tmp[row++] = sum4; 2604019b515eSShri Abhyankar tmp[row++] = sum5; 2605019b515eSShri Abhyankar break; 2606d71ae5a4SJacob Faibussowitsch default: 2607d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not yet supported "); 2608019b515eSShri Abhyankar } 2609019b515eSShri Abhyankar } 2610019b515eSShri Abhyankar /* backward solve the upper triangular */ 26114d12350bSJunchao Zhang for (i = node_max - 1; i >= 0; i--) { 26124d12350bSJunchao Zhang row = ns[i + 1] - 1; 26134d12350bSJunchao Zhang nsz = ns[i + 1] - ns[i]; 2614019b515eSShri Abhyankar aii = ad[row + 1] + 1; 2615019b515eSShri Abhyankar v1 = aa + aii; 2616019b515eSShri Abhyankar vi = aj + aii; 2617019b515eSShri Abhyankar nz = ad[row] - ad[row + 1] - 1; 261898991853SShri Abhyankar 261998991853SShri Abhyankar if (i > 0) { 262098991853SShri Abhyankar /* Prefetch the indices for the next block */ 262150d8bf02SJed Brown PetscPrefetchBlock(aj + ad[row - nsz + 1] + 1, ad[row - nsz] - ad[row - nsz + 1], 0, PETSC_PREFETCH_HINT_NTA); 262298991853SShri Abhyankar /* Prefetch the data for the next block */ 26234d12350bSJunchao Zhang PetscPrefetchBlock(aa + ad[row - nsz + 1] + 1, ad[ns[i - 1] + 1] - ad[row - nsz + 1], 0, PETSC_PREFETCH_HINT_NTA); 262498991853SShri Abhyankar } 262598991853SShri Abhyankar 2626019b515eSShri Abhyankar switch (nsz) { /* Each loop in 'case' is unrolled */ 2627019b515eSShri Abhyankar case 1: 2628019b515eSShri Abhyankar sum1 = tmp[row]; 2629019b515eSShri Abhyankar 2630019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2631019b515eSShri Abhyankar i0 = vi[j]; 2632019b515eSShri Abhyankar i1 = vi[j + 1]; 2633019b515eSShri Abhyankar tmp0 = tmps[i0]; 2634019b515eSShri Abhyankar tmp1 = tmps[i1]; 2635019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2636019b515eSShri Abhyankar } 2637019b515eSShri Abhyankar if (j == nz - 1) { 2638019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2639019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2640019b515eSShri Abhyankar } 26419371c9d4SSatish Balay x[c[row]] = tmp[row] = sum1 * v1[nz]; 26429371c9d4SSatish Balay row--; 2643019b515eSShri Abhyankar break; 2644019b515eSShri Abhyankar case 2: 2645019b515eSShri Abhyankar sum1 = tmp[row]; 2646019b515eSShri Abhyankar sum2 = tmp[row - 1]; 2647019b515eSShri Abhyankar v2 = aa + ad[row] + 1; 2648019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2649019b515eSShri Abhyankar i0 = vi[j]; 2650019b515eSShri Abhyankar i1 = vi[j + 1]; 2651019b515eSShri Abhyankar tmp0 = tmps[i0]; 2652019b515eSShri Abhyankar tmp1 = tmps[i1]; 2653019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2654019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0 + v2[j + 2] * tmp1; 2655019b515eSShri Abhyankar } 2656019b515eSShri Abhyankar if (j == nz - 1) { 2657019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2658019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2659019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0; 2660019b515eSShri Abhyankar } 2661019b515eSShri Abhyankar 26629371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum1 * v1[nz]; 26639371c9d4SSatish Balay row--; 2664019b515eSShri Abhyankar sum2 -= v2[0] * tmp0; 26659371c9d4SSatish Balay x[c[row]] = tmp[row] = sum2 * v2[nz + 1]; 26669371c9d4SSatish Balay row--; 2667019b515eSShri Abhyankar break; 2668019b515eSShri Abhyankar case 3: 2669019b515eSShri Abhyankar sum1 = tmp[row]; 2670019b515eSShri Abhyankar sum2 = tmp[row - 1]; 2671019b515eSShri Abhyankar sum3 = tmp[row - 2]; 2672019b515eSShri Abhyankar v2 = aa + ad[row] + 1; 2673019b515eSShri Abhyankar v3 = aa + ad[row - 1] + 1; 2674019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2675019b515eSShri Abhyankar i0 = vi[j]; 2676019b515eSShri Abhyankar i1 = vi[j + 1]; 2677019b515eSShri Abhyankar tmp0 = tmps[i0]; 2678019b515eSShri Abhyankar tmp1 = tmps[i1]; 2679019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2680019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0 + v2[j + 2] * tmp1; 2681019b515eSShri Abhyankar sum3 -= v3[j + 2] * tmp0 + v3[j + 3] * tmp1; 2682019b515eSShri Abhyankar } 2683019b515eSShri Abhyankar if (j == nz - 1) { 2684019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2685019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2686019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0; 2687019b515eSShri Abhyankar sum3 -= v3[j + 2] * tmp0; 2688019b515eSShri Abhyankar } 26899371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum1 * v1[nz]; 26909371c9d4SSatish Balay row--; 2691019b515eSShri Abhyankar sum2 -= v2[0] * tmp0; 2692019b515eSShri Abhyankar sum3 -= v3[1] * tmp0; 26939371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum2 * v2[nz + 1]; 26949371c9d4SSatish Balay row--; 2695019b515eSShri Abhyankar sum3 -= v3[0] * tmp0; 26969371c9d4SSatish Balay x[c[row]] = tmp[row] = sum3 * v3[nz + 2]; 26979371c9d4SSatish Balay row--; 2698019b515eSShri Abhyankar 2699019b515eSShri Abhyankar break; 2700019b515eSShri Abhyankar case 4: 2701019b515eSShri Abhyankar sum1 = tmp[row]; 2702019b515eSShri Abhyankar sum2 = tmp[row - 1]; 2703019b515eSShri Abhyankar sum3 = tmp[row - 2]; 2704019b515eSShri Abhyankar sum4 = tmp[row - 3]; 2705019b515eSShri Abhyankar v2 = aa + ad[row] + 1; 2706019b515eSShri Abhyankar v3 = aa + ad[row - 1] + 1; 2707019b515eSShri Abhyankar v4 = aa + ad[row - 2] + 1; 2708019b515eSShri Abhyankar 2709019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2710019b515eSShri Abhyankar i0 = vi[j]; 2711019b515eSShri Abhyankar i1 = vi[j + 1]; 2712019b515eSShri Abhyankar tmp0 = tmps[i0]; 2713019b515eSShri Abhyankar tmp1 = tmps[i1]; 2714019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2715019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0 + v2[j + 2] * tmp1; 2716019b515eSShri Abhyankar sum3 -= v3[j + 2] * tmp0 + v3[j + 3] * tmp1; 2717019b515eSShri Abhyankar sum4 -= v4[j + 3] * tmp0 + v4[j + 4] * tmp1; 2718019b515eSShri Abhyankar } 2719019b515eSShri Abhyankar if (j == nz - 1) { 2720019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2721019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2722019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0; 2723019b515eSShri Abhyankar sum3 -= v3[j + 2] * tmp0; 2724019b515eSShri Abhyankar sum4 -= v4[j + 3] * tmp0; 2725019b515eSShri Abhyankar } 2726019b515eSShri Abhyankar 27279371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum1 * v1[nz]; 27289371c9d4SSatish Balay row--; 2729019b515eSShri Abhyankar sum2 -= v2[0] * tmp0; 2730019b515eSShri Abhyankar sum3 -= v3[1] * tmp0; 2731019b515eSShri Abhyankar sum4 -= v4[2] * tmp0; 27329371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum2 * v2[nz + 1]; 27339371c9d4SSatish Balay row--; 2734019b515eSShri Abhyankar sum3 -= v3[0] * tmp0; 2735019b515eSShri Abhyankar sum4 -= v4[1] * tmp0; 27369371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum3 * v3[nz + 2]; 27379371c9d4SSatish Balay row--; 2738019b515eSShri Abhyankar sum4 -= v4[0] * tmp0; 27399371c9d4SSatish Balay x[c[row]] = tmp[row] = sum4 * v4[nz + 3]; 27409371c9d4SSatish Balay row--; 2741019b515eSShri Abhyankar break; 2742019b515eSShri Abhyankar case 5: 2743019b515eSShri Abhyankar sum1 = tmp[row]; 2744019b515eSShri Abhyankar sum2 = tmp[row - 1]; 2745019b515eSShri Abhyankar sum3 = tmp[row - 2]; 2746019b515eSShri Abhyankar sum4 = tmp[row - 3]; 2747019b515eSShri Abhyankar sum5 = tmp[row - 4]; 2748019b515eSShri Abhyankar v2 = aa + ad[row] + 1; 2749019b515eSShri Abhyankar v3 = aa + ad[row - 1] + 1; 2750019b515eSShri Abhyankar v4 = aa + ad[row - 2] + 1; 2751019b515eSShri Abhyankar v5 = aa + ad[row - 3] + 1; 2752019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2753019b515eSShri Abhyankar i0 = vi[j]; 2754019b515eSShri Abhyankar i1 = vi[j + 1]; 2755019b515eSShri Abhyankar tmp0 = tmps[i0]; 2756019b515eSShri Abhyankar tmp1 = tmps[i1]; 2757019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2758019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0 + v2[j + 2] * tmp1; 2759019b515eSShri Abhyankar sum3 -= v3[j + 2] * tmp0 + v3[j + 3] * tmp1; 2760019b515eSShri Abhyankar sum4 -= v4[j + 3] * tmp0 + v4[j + 4] * tmp1; 2761019b515eSShri Abhyankar sum5 -= v5[j + 4] * tmp0 + v5[j + 5] * tmp1; 2762019b515eSShri Abhyankar } 2763019b515eSShri Abhyankar if (j == nz - 1) { 2764019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2765019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2766019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0; 2767019b515eSShri Abhyankar sum3 -= v3[j + 2] * tmp0; 2768019b515eSShri Abhyankar sum4 -= v4[j + 3] * tmp0; 2769019b515eSShri Abhyankar sum5 -= v5[j + 4] * tmp0; 2770019b515eSShri Abhyankar } 2771019b515eSShri Abhyankar 27729371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum1 * v1[nz]; 27739371c9d4SSatish Balay row--; 2774019b515eSShri Abhyankar sum2 -= v2[0] * tmp0; 2775019b515eSShri Abhyankar sum3 -= v3[1] * tmp0; 2776019b515eSShri Abhyankar sum4 -= v4[2] * tmp0; 2777019b515eSShri Abhyankar sum5 -= v5[3] * tmp0; 27789371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum2 * v2[nz + 1]; 27799371c9d4SSatish Balay row--; 2780019b515eSShri Abhyankar sum3 -= v3[0] * tmp0; 2781019b515eSShri Abhyankar sum4 -= v4[1] * tmp0; 2782019b515eSShri Abhyankar sum5 -= v5[2] * tmp0; 27839371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum3 * v3[nz + 2]; 27849371c9d4SSatish Balay row--; 2785019b515eSShri Abhyankar sum4 -= v4[0] * tmp0; 2786019b515eSShri Abhyankar sum5 -= v5[1] * tmp0; 27879371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum4 * v4[nz + 3]; 27889371c9d4SSatish Balay row--; 2789019b515eSShri Abhyankar sum5 -= v5[0] * tmp0; 27909371c9d4SSatish Balay x[c[row]] = tmp[row] = sum5 * v5[nz + 4]; 27919371c9d4SSatish Balay row--; 2792019b515eSShri Abhyankar break; 2793d71ae5a4SJacob Faibussowitsch default: 2794d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not yet supported "); 2795019b515eSShri Abhyankar } 2796019b515eSShri Abhyankar } 27979566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &rout)); 27989566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol, &cout)); 27999566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(bb, &b)); 28009566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(xx, &x)); 28019566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * a->nz - A->cmap->n)); 28023ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2803019b515eSShri Abhyankar } 2804019b515eSShri Abhyankar 28054c1414c8SBarry Smith /* 28064c1414c8SBarry Smith Makes a longer coloring[] array and calls the usual code with that 28074c1414c8SBarry Smith */ 280866976f2fSJacob Faibussowitsch static PetscErrorCode MatColoringPatch_SeqAIJ_Inode(Mat mat, PetscInt ncolors, PetscInt nin, ISColoringValue coloring[], ISColoring *iscoloring) 2809d71ae5a4SJacob Faibussowitsch { 28104c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)mat->data; 28114d12350bSJunchao Zhang PetscInt n = mat->cmap->n, m = a->inode.node_count, j, *ns = a->inode.size_csr, row; 28124c1414c8SBarry Smith PetscInt *colorused, i; 28134c1414c8SBarry Smith ISColoringValue *newcolor; 28144c1414c8SBarry Smith 28154c1414c8SBarry Smith PetscFunctionBegin; 28164d12350bSJunchao Zhang PetscCheck(a->inode.size_csr, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 28179566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n + 1, &newcolor)); 28184c1414c8SBarry Smith /* loop over inodes, marking a color for each column*/ 28194c1414c8SBarry Smith row = 0; 28204c1414c8SBarry Smith for (i = 0; i < m; i++) { 28214d12350bSJunchao Zhang for (j = 0; j < (ns[i + 1] - ns[i]); j++) PetscCall(ISColoringValueCast(coloring[i] + j * ncolors, newcolor + row++)); 28224c1414c8SBarry Smith } 28234c1414c8SBarry Smith 28244c1414c8SBarry Smith /* eliminate unneeded colors */ 28259566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(5 * ncolors, &colorused)); 2826ad540459SPierre Jolivet for (i = 0; i < n; i++) colorused[newcolor[i]] = 1; 28274c1414c8SBarry Smith 2828ad540459SPierre Jolivet for (i = 1; i < 5 * ncolors; i++) colorused[i] += colorused[i - 1]; 28294c1414c8SBarry Smith ncolors = colorused[5 * ncolors - 1]; 28306497c311SBarry Smith for (i = 0; i < n; i++) PetscCall(ISColoringValueCast(colorused[newcolor[i]] - 1, newcolor + i)); 28319566063dSJacob Faibussowitsch PetscCall(PetscFree(colorused)); 28329566063dSJacob Faibussowitsch PetscCall(ISColoringCreate(PetscObjectComm((PetscObject)mat), ncolors, n, newcolor, PETSC_OWN_POINTER, iscoloring)); 28339566063dSJacob Faibussowitsch PetscCall(PetscFree(coloring)); 28343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 28354c1414c8SBarry Smith } 28364c1414c8SBarry Smith 2837af0996ceSBarry Smith #include <petsc/private/kernels/blockinvert.h> 28382af78befSBarry Smith 2839d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSOR_SeqAIJ_Inode(Mat A, Vec bb, PetscReal omega, MatSORType flag, PetscReal fshift, PetscInt its, PetscInt lits, Vec xx) 2840d71ae5a4SJacob Faibussowitsch { 28412af78befSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 28427aaeff0aSMatthew G. Knepley PetscScalar sum1 = 0.0, sum2 = 0.0, sum3 = 0.0, sum4 = 0.0, sum5 = 0.0, tmp0, tmp1, tmp2, tmp3; 28435850ef23SBarry Smith MatScalar *ibdiag, *bdiag, work[25], *t; 2844a8b09249SBarry Smith PetscScalar *x, tmp4, tmp5, x1, x2, x3, x4, x5; 28457aaeff0aSMatthew G. Knepley const MatScalar *v = a->a, *v1 = NULL, *v2 = NULL, *v3 = NULL, *v4 = NULL, *v5 = NULL; 28465850ef23SBarry Smith const PetscScalar *xb, *b; 28477b6c816cSBarry Smith PetscReal zeropivot = 100. * PETSC_MACHINE_EPSILON, shift = 0.0; 28484d12350bSJunchao Zhang PetscInt n, m = a->inode.node_count, cnt = 0, i, j, row, i1, i2, nodesz; 28498758e1faSBarry Smith PetscInt sz, k, ipvt[5]; 28507b6c816cSBarry Smith PetscBool allowzeropivot, zeropivotdetected; 28514d12350bSJunchao Zhang const PetscInt *sizes = a->inode.size_csr, *idx, *diag = a->diag, *ii = a->i; 28522af78befSBarry Smith 28532af78befSBarry Smith PetscFunctionBegin; 2854a455e926SHong Zhang allowzeropivot = PetscNot(A->erroriffailure); 28554d12350bSJunchao Zhang PetscCheck(a->inode.size_csr, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 285608401ef6SPierre Jolivet PetscCheck(omega == 1.0, PETSC_COMM_SELF, PETSC_ERR_SUP, "No support for omega != 1.0; use -mat_no_inode"); 285708401ef6SPierre Jolivet PetscCheck(fshift == 0.0, PETSC_COMM_SELF, PETSC_ERR_SUP, "No support for fshift != 0.0; use -mat_no_inode"); 28582af78befSBarry Smith 285971f1c65dSBarry Smith if (!a->inode.ibdiagvalid) { 28602af78befSBarry Smith if (!a->inode.ibdiag) { 28612af78befSBarry Smith /* calculate space needed for diagonal blocks */ 28624d12350bSJunchao Zhang for (i = 0; i < m; i++) { 28634d12350bSJunchao Zhang nodesz = sizes[i + 1] - sizes[i]; 28644d12350bSJunchao Zhang cnt += nodesz * nodesz; 28654d12350bSJunchao Zhang } 2866f0d39aaaSBarry Smith a->inode.bdiagsize = cnt; 28672205254eSKarl Rupp 28689566063dSJacob Faibussowitsch PetscCall(PetscMalloc3(cnt, &a->inode.ibdiag, cnt, &a->inode.bdiag, A->rmap->n, &a->inode.ssor_work)); 286971f1c65dSBarry Smith } 287071f1c65dSBarry Smith 287171f1c65dSBarry Smith /* copy over the diagonal blocks and invert them */ 28722af78befSBarry Smith ibdiag = a->inode.ibdiag; 28732af78befSBarry Smith bdiag = a->inode.bdiag; 28742af78befSBarry Smith cnt = 0; 28752af78befSBarry Smith for (i = 0, row = 0; i < m; i++) { 28764d12350bSJunchao Zhang nodesz = sizes[i + 1] - sizes[i]; 28774d12350bSJunchao Zhang for (j = 0; j < nodesz; j++) { 28784d12350bSJunchao Zhang for (k = 0; k < nodesz; k++) bdiag[cnt + k * nodesz + j] = v[diag[row + j] - j + k]; 28792af78befSBarry Smith } 28804d12350bSJunchao Zhang PetscCall(PetscArraycpy(ibdiag + cnt, bdiag + cnt, nodesz * nodesz)); 28812af78befSBarry Smith 28824d12350bSJunchao Zhang switch (nodesz) { 28832af78befSBarry Smith case 1: 28842af78befSBarry Smith /* Create matrix data structure */ 28858e0e2a9aSHong Zhang if (PetscAbsScalar(ibdiag[cnt]) < zeropivot) { 28868e0e2a9aSHong Zhang if (allowzeropivot) { 28877b6c816cSBarry Smith A->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 28887b6c816cSBarry Smith A->factorerror_zeropivot_value = PetscAbsScalar(ibdiag[cnt]); 28897b6c816cSBarry Smith A->factorerror_zeropivot_row = row; 28909566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Zero pivot, row %" PetscInt_FMT "\n", row)); 289198921bdaSJacob Faibussowitsch } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_MAT_LU_ZRPVT, "Zero pivot on row %" PetscInt_FMT, row); 28928e0e2a9aSHong Zhang } 289364c62002SMatthew Knepley ibdiag[cnt] = 1.0 / ibdiag[cnt]; 28942af78befSBarry Smith break; 28952af78befSBarry Smith case 2: 28969566063dSJacob Faibussowitsch PetscCall(PetscKernel_A_gets_inverse_A_2(ibdiag + cnt, shift, allowzeropivot, &zeropivotdetected)); 28977b6c816cSBarry Smith if (zeropivotdetected) A->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 28982af78befSBarry Smith break; 28992af78befSBarry Smith case 3: 29009566063dSJacob Faibussowitsch PetscCall(PetscKernel_A_gets_inverse_A_3(ibdiag + cnt, shift, allowzeropivot, &zeropivotdetected)); 29017b6c816cSBarry Smith if (zeropivotdetected) A->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 29022af78befSBarry Smith break; 29032af78befSBarry Smith case 4: 29049566063dSJacob Faibussowitsch PetscCall(PetscKernel_A_gets_inverse_A_4(ibdiag + cnt, shift, allowzeropivot, &zeropivotdetected)); 29057b6c816cSBarry Smith if (zeropivotdetected) A->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 29062af78befSBarry Smith break; 29072af78befSBarry Smith case 5: 29089566063dSJacob Faibussowitsch PetscCall(PetscKernel_A_gets_inverse_A_5(ibdiag + cnt, ipvt, work, shift, allowzeropivot, &zeropivotdetected)); 29097b6c816cSBarry Smith if (zeropivotdetected) A->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 29102af78befSBarry Smith break; 2911d71ae5a4SJacob Faibussowitsch default: 29124d12350bSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not supported, node row %" PetscInt_FMT " size %" PetscInt_FMT, row, nodesz); 29132af78befSBarry Smith } 29144d12350bSJunchao Zhang cnt += nodesz * nodesz; 29154d12350bSJunchao Zhang row += nodesz; 29162af78befSBarry Smith } 291771f1c65dSBarry Smith a->inode.ibdiagvalid = PETSC_TRUE; 29182af78befSBarry Smith } 29192af78befSBarry Smith ibdiag = a->inode.ibdiag; 29202af78befSBarry Smith bdiag = a->inode.bdiag; 29215850ef23SBarry Smith t = a->inode.ssor_work; 29222af78befSBarry Smith 29239566063dSJacob Faibussowitsch PetscCall(VecGetArray(xx, &x)); 29249566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(bb, &b)); 29255850ef23SBarry Smith /* We count flops by assuming the upper triangular and lower triangular parts have the same number of nonzeros */ 29265850ef23SBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 29272af78befSBarry Smith if (flag & SOR_FORWARD_SWEEP || flag & SOR_LOCAL_FORWARD_SWEEP) { 29288862d2efSBarry Smith for (i = 0, row = 0; i < m; i++) { 29298862d2efSBarry Smith sz = diag[row] - ii[row]; 29308862d2efSBarry Smith v1 = a->a + ii[row]; 29318862d2efSBarry Smith idx = a->j + ii[row]; 29328862d2efSBarry Smith 29334108e4d5SBarry Smith /* see comments for MatMult_SeqAIJ_Inode() for how this is coded */ 29344d12350bSJunchao Zhang nodesz = sizes[i + 1] - sizes[i]; 29354d12350bSJunchao Zhang switch (nodesz) { 29368862d2efSBarry Smith case 1: 29378862d2efSBarry Smith 29388862d2efSBarry Smith sum1 = b[row]; 29398862d2efSBarry Smith for (n = 0; n < sz - 1; n += 2) { 29408862d2efSBarry Smith i1 = idx[0]; 29418862d2efSBarry Smith i2 = idx[1]; 29428862d2efSBarry Smith idx += 2; 29438862d2efSBarry Smith tmp0 = x[i1]; 29448862d2efSBarry Smith tmp1 = x[i2]; 29459371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 29469371c9d4SSatish Balay v1 += 2; 29478862d2efSBarry Smith } 29488862d2efSBarry Smith 29498862d2efSBarry Smith if (n == sz - 1) { 2950f0d39aaaSBarry Smith tmp0 = x[*idx]; 2951f0d39aaaSBarry Smith sum1 -= *v1 * tmp0; 29528862d2efSBarry Smith } 29535850ef23SBarry Smith t[row] = sum1; 29548862d2efSBarry Smith x[row++] = sum1 * (*ibdiag++); 29558862d2efSBarry Smith break; 2956f0d39aaaSBarry Smith case 2: 2957f0d39aaaSBarry Smith v2 = a->a + ii[row + 1]; 2958f0d39aaaSBarry Smith sum1 = b[row]; 2959f0d39aaaSBarry Smith sum2 = b[row + 1]; 2960f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 2961f0d39aaaSBarry Smith i1 = idx[0]; 2962f0d39aaaSBarry Smith i2 = idx[1]; 2963f0d39aaaSBarry Smith idx += 2; 2964f0d39aaaSBarry Smith tmp0 = x[i1]; 2965f0d39aaaSBarry Smith tmp1 = x[i2]; 29669371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 29679371c9d4SSatish Balay v1 += 2; 29689371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 29699371c9d4SSatish Balay v2 += 2; 2970f0d39aaaSBarry Smith } 2971f0d39aaaSBarry Smith 2972f0d39aaaSBarry Smith if (n == sz - 1) { 2973f0d39aaaSBarry Smith tmp0 = x[*idx]; 2974f0d39aaaSBarry Smith sum1 -= v1[0] * tmp0; 2975f0d39aaaSBarry Smith sum2 -= v2[0] * tmp0; 2976f0d39aaaSBarry Smith } 29775850ef23SBarry Smith t[row] = sum1; 29785850ef23SBarry Smith t[row + 1] = sum2; 2979f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[0] + sum2 * ibdiag[2]; 2980f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[1] + sum2 * ibdiag[3]; 2981f0d39aaaSBarry Smith ibdiag += 4; 2982f0d39aaaSBarry Smith break; 2983f0d39aaaSBarry Smith case 3: 2984f0d39aaaSBarry Smith v2 = a->a + ii[row + 1]; 2985f0d39aaaSBarry Smith v3 = a->a + ii[row + 2]; 2986f0d39aaaSBarry Smith sum1 = b[row]; 2987f0d39aaaSBarry Smith sum2 = b[row + 1]; 2988f0d39aaaSBarry Smith sum3 = b[row + 2]; 2989f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 2990f0d39aaaSBarry Smith i1 = idx[0]; 2991f0d39aaaSBarry Smith i2 = idx[1]; 2992f0d39aaaSBarry Smith idx += 2; 2993f0d39aaaSBarry Smith tmp0 = x[i1]; 2994f0d39aaaSBarry Smith tmp1 = x[i2]; 29959371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 29969371c9d4SSatish Balay v1 += 2; 29979371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 29989371c9d4SSatish Balay v2 += 2; 29999371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 30009371c9d4SSatish Balay v3 += 2; 3001f0d39aaaSBarry Smith } 3002f0d39aaaSBarry Smith 3003f0d39aaaSBarry Smith if (n == sz - 1) { 3004f0d39aaaSBarry Smith tmp0 = x[*idx]; 3005f0d39aaaSBarry Smith sum1 -= v1[0] * tmp0; 3006f0d39aaaSBarry Smith sum2 -= v2[0] * tmp0; 3007f0d39aaaSBarry Smith sum3 -= v3[0] * tmp0; 3008f0d39aaaSBarry Smith } 30095850ef23SBarry Smith t[row] = sum1; 30105850ef23SBarry Smith t[row + 1] = sum2; 30115850ef23SBarry Smith t[row + 2] = sum3; 3012f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[0] + sum2 * ibdiag[3] + sum3 * ibdiag[6]; 3013f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[1] + sum2 * ibdiag[4] + sum3 * ibdiag[7]; 3014f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[2] + sum2 * ibdiag[5] + sum3 * ibdiag[8]; 3015f0d39aaaSBarry Smith ibdiag += 9; 3016f0d39aaaSBarry Smith break; 3017f0d39aaaSBarry Smith case 4: 3018f0d39aaaSBarry Smith v2 = a->a + ii[row + 1]; 3019f0d39aaaSBarry Smith v3 = a->a + ii[row + 2]; 3020f0d39aaaSBarry Smith v4 = a->a + ii[row + 3]; 3021f0d39aaaSBarry Smith sum1 = b[row]; 3022f0d39aaaSBarry Smith sum2 = b[row + 1]; 3023f0d39aaaSBarry Smith sum3 = b[row + 2]; 3024f0d39aaaSBarry Smith sum4 = b[row + 3]; 3025f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 3026f0d39aaaSBarry Smith i1 = idx[0]; 3027f0d39aaaSBarry Smith i2 = idx[1]; 3028f0d39aaaSBarry Smith idx += 2; 3029f0d39aaaSBarry Smith tmp0 = x[i1]; 3030f0d39aaaSBarry Smith tmp1 = x[i2]; 30319371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 30329371c9d4SSatish Balay v1 += 2; 30339371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 30349371c9d4SSatish Balay v2 += 2; 30359371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 30369371c9d4SSatish Balay v3 += 2; 30379371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 30389371c9d4SSatish Balay v4 += 2; 3039f0d39aaaSBarry Smith } 3040f0d39aaaSBarry Smith 3041f0d39aaaSBarry Smith if (n == sz - 1) { 3042f0d39aaaSBarry Smith tmp0 = x[*idx]; 3043f0d39aaaSBarry Smith sum1 -= v1[0] * tmp0; 3044f0d39aaaSBarry Smith sum2 -= v2[0] * tmp0; 3045f0d39aaaSBarry Smith sum3 -= v3[0] * tmp0; 3046f0d39aaaSBarry Smith sum4 -= v4[0] * tmp0; 3047f0d39aaaSBarry Smith } 30485850ef23SBarry Smith t[row] = sum1; 30495850ef23SBarry Smith t[row + 1] = sum2; 30505850ef23SBarry Smith t[row + 2] = sum3; 30515850ef23SBarry Smith t[row + 3] = sum4; 3052f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[0] + sum2 * ibdiag[4] + sum3 * ibdiag[8] + sum4 * ibdiag[12]; 3053f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[1] + sum2 * ibdiag[5] + sum3 * ibdiag[9] + sum4 * ibdiag[13]; 3054f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[2] + sum2 * ibdiag[6] + sum3 * ibdiag[10] + sum4 * ibdiag[14]; 3055f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[3] + sum2 * ibdiag[7] + sum3 * ibdiag[11] + sum4 * ibdiag[15]; 3056f0d39aaaSBarry Smith ibdiag += 16; 3057f0d39aaaSBarry Smith break; 3058f0d39aaaSBarry Smith case 5: 3059f0d39aaaSBarry Smith v2 = a->a + ii[row + 1]; 3060f0d39aaaSBarry Smith v3 = a->a + ii[row + 2]; 3061f0d39aaaSBarry Smith v4 = a->a + ii[row + 3]; 3062f0d39aaaSBarry Smith v5 = a->a + ii[row + 4]; 3063f0d39aaaSBarry Smith sum1 = b[row]; 3064f0d39aaaSBarry Smith sum2 = b[row + 1]; 3065f0d39aaaSBarry Smith sum3 = b[row + 2]; 3066f0d39aaaSBarry Smith sum4 = b[row + 3]; 3067f0d39aaaSBarry Smith sum5 = b[row + 4]; 3068f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 3069f0d39aaaSBarry Smith i1 = idx[0]; 3070f0d39aaaSBarry Smith i2 = idx[1]; 3071f0d39aaaSBarry Smith idx += 2; 3072f0d39aaaSBarry Smith tmp0 = x[i1]; 3073f0d39aaaSBarry Smith tmp1 = x[i2]; 30749371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 30759371c9d4SSatish Balay v1 += 2; 30769371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 30779371c9d4SSatish Balay v2 += 2; 30789371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 30799371c9d4SSatish Balay v3 += 2; 30809371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 30819371c9d4SSatish Balay v4 += 2; 30829371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 30839371c9d4SSatish Balay v5 += 2; 3084f0d39aaaSBarry Smith } 3085f0d39aaaSBarry Smith 3086f0d39aaaSBarry Smith if (n == sz - 1) { 3087f0d39aaaSBarry Smith tmp0 = x[*idx]; 3088f0d39aaaSBarry Smith sum1 -= v1[0] * tmp0; 3089f0d39aaaSBarry Smith sum2 -= v2[0] * tmp0; 3090f0d39aaaSBarry Smith sum3 -= v3[0] * tmp0; 3091f0d39aaaSBarry Smith sum4 -= v4[0] * tmp0; 3092f0d39aaaSBarry Smith sum5 -= v5[0] * tmp0; 3093f0d39aaaSBarry Smith } 30945850ef23SBarry Smith t[row] = sum1; 30955850ef23SBarry Smith t[row + 1] = sum2; 30965850ef23SBarry Smith t[row + 2] = sum3; 30975850ef23SBarry Smith t[row + 3] = sum4; 30985850ef23SBarry Smith t[row + 4] = sum5; 3099f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[0] + sum2 * ibdiag[5] + sum3 * ibdiag[10] + sum4 * ibdiag[15] + sum5 * ibdiag[20]; 3100f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[1] + sum2 * ibdiag[6] + sum3 * ibdiag[11] + sum4 * ibdiag[16] + sum5 * ibdiag[21]; 3101f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[2] + sum2 * ibdiag[7] + sum3 * ibdiag[12] + sum4 * ibdiag[17] + sum5 * ibdiag[22]; 3102f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[3] + sum2 * ibdiag[8] + sum3 * ibdiag[13] + sum4 * ibdiag[18] + sum5 * ibdiag[23]; 3103f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[4] + sum2 * ibdiag[9] + sum3 * ibdiag[14] + sum4 * ibdiag[19] + sum5 * ibdiag[24]; 3104f0d39aaaSBarry Smith ibdiag += 25; 3105f0d39aaaSBarry Smith break; 3106d71ae5a4SJacob Faibussowitsch default: 31074d12350bSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not supported, node row %" PetscInt_FMT " size %" PetscInt_FMT, row, nodesz); 31088862d2efSBarry Smith } 31092af78befSBarry Smith } 31102af78befSBarry Smith 31115850ef23SBarry Smith xb = t; 31129566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(a->nz)); 31132af78befSBarry Smith } else xb = b; 31142af78befSBarry Smith if (flag & SOR_BACKWARD_SWEEP || flag & SOR_LOCAL_BACKWARD_SWEEP) { 3115f0d39aaaSBarry Smith ibdiag = a->inode.ibdiag + a->inode.bdiagsize; 3116d0f46423SBarry Smith for (i = m - 1, row = A->rmap->n - 1; i >= 0; i--) { 31174d12350bSJunchao Zhang nodesz = sizes[i + 1] - sizes[i]; 31184d12350bSJunchao Zhang ibdiag -= nodesz * nodesz; 31198862d2efSBarry Smith sz = ii[row + 1] - diag[row] - 1; 31208862d2efSBarry Smith v1 = a->a + diag[row] + 1; 31218862d2efSBarry Smith idx = a->j + diag[row] + 1; 31222af78befSBarry Smith 31234108e4d5SBarry Smith /* see comments for MatMult_SeqAIJ_Inode() for how this is coded */ 31244d12350bSJunchao Zhang switch (nodesz) { 31258862d2efSBarry Smith case 1: 31268862d2efSBarry Smith 31278862d2efSBarry Smith sum1 = xb[row]; 31288862d2efSBarry Smith for (n = 0; n < sz - 1; n += 2) { 31298862d2efSBarry Smith i1 = idx[0]; 31308862d2efSBarry Smith i2 = idx[1]; 31318862d2efSBarry Smith idx += 2; 31328862d2efSBarry Smith tmp0 = x[i1]; 31338862d2efSBarry Smith tmp1 = x[i2]; 31349371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 31359371c9d4SSatish Balay v1 += 2; 31368862d2efSBarry Smith } 31378862d2efSBarry Smith 31388862d2efSBarry Smith if (n == sz - 1) { 3139f0d39aaaSBarry Smith tmp0 = x[*idx]; 3140f0d39aaaSBarry Smith sum1 -= *v1 * tmp0; 31418862d2efSBarry Smith } 3142f0d39aaaSBarry Smith x[row--] = sum1 * (*ibdiag); 3143f0d39aaaSBarry Smith break; 3144f0d39aaaSBarry Smith 3145f0d39aaaSBarry Smith case 2: 3146f0d39aaaSBarry Smith 3147f0d39aaaSBarry Smith sum1 = xb[row]; 3148f0d39aaaSBarry Smith sum2 = xb[row - 1]; 3149f0d39aaaSBarry Smith /* note that sum1 is associated with the second of the two rows */ 3150f0d39aaaSBarry Smith v2 = a->a + diag[row - 1] + 2; 3151f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 3152f0d39aaaSBarry Smith i1 = idx[0]; 3153f0d39aaaSBarry Smith i2 = idx[1]; 3154f0d39aaaSBarry Smith idx += 2; 3155f0d39aaaSBarry Smith tmp0 = x[i1]; 3156f0d39aaaSBarry Smith tmp1 = x[i2]; 31579371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 31589371c9d4SSatish Balay v1 += 2; 31599371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 31609371c9d4SSatish Balay v2 += 2; 3161f0d39aaaSBarry Smith } 3162f0d39aaaSBarry Smith 3163f0d39aaaSBarry Smith if (n == sz - 1) { 3164f0d39aaaSBarry Smith tmp0 = x[*idx]; 3165f0d39aaaSBarry Smith sum1 -= *v1 * tmp0; 3166f0d39aaaSBarry Smith sum2 -= *v2 * tmp0; 3167f0d39aaaSBarry Smith } 3168f0d39aaaSBarry Smith x[row--] = sum2 * ibdiag[1] + sum1 * ibdiag[3]; 3169f0d39aaaSBarry Smith x[row--] = sum2 * ibdiag[0] + sum1 * ibdiag[2]; 3170f0d39aaaSBarry Smith break; 3171f0d39aaaSBarry Smith case 3: 3172f0d39aaaSBarry Smith 3173f0d39aaaSBarry Smith sum1 = xb[row]; 3174f0d39aaaSBarry Smith sum2 = xb[row - 1]; 3175f0d39aaaSBarry Smith sum3 = xb[row - 2]; 3176f0d39aaaSBarry Smith v2 = a->a + diag[row - 1] + 2; 3177f0d39aaaSBarry Smith v3 = a->a + diag[row - 2] + 3; 3178f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 3179f0d39aaaSBarry Smith i1 = idx[0]; 3180f0d39aaaSBarry Smith i2 = idx[1]; 3181f0d39aaaSBarry Smith idx += 2; 3182f0d39aaaSBarry Smith tmp0 = x[i1]; 3183f0d39aaaSBarry Smith tmp1 = x[i2]; 31849371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 31859371c9d4SSatish Balay v1 += 2; 31869371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 31879371c9d4SSatish Balay v2 += 2; 31889371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 31899371c9d4SSatish Balay v3 += 2; 3190f0d39aaaSBarry Smith } 3191f0d39aaaSBarry Smith 3192f0d39aaaSBarry Smith if (n == sz - 1) { 3193f0d39aaaSBarry Smith tmp0 = x[*idx]; 3194f0d39aaaSBarry Smith sum1 -= *v1 * tmp0; 3195f0d39aaaSBarry Smith sum2 -= *v2 * tmp0; 3196f0d39aaaSBarry Smith sum3 -= *v3 * tmp0; 3197f0d39aaaSBarry Smith } 3198f0d39aaaSBarry Smith x[row--] = sum3 * ibdiag[2] + sum2 * ibdiag[5] + sum1 * ibdiag[8]; 3199f0d39aaaSBarry Smith x[row--] = sum3 * ibdiag[1] + sum2 * ibdiag[4] + sum1 * ibdiag[7]; 3200f0d39aaaSBarry Smith x[row--] = sum3 * ibdiag[0] + sum2 * ibdiag[3] + sum1 * ibdiag[6]; 3201f0d39aaaSBarry Smith break; 3202f0d39aaaSBarry Smith case 4: 3203f0d39aaaSBarry Smith 3204f0d39aaaSBarry Smith sum1 = xb[row]; 3205f0d39aaaSBarry Smith sum2 = xb[row - 1]; 3206f0d39aaaSBarry Smith sum3 = xb[row - 2]; 3207f0d39aaaSBarry Smith sum4 = xb[row - 3]; 3208f0d39aaaSBarry Smith v2 = a->a + diag[row - 1] + 2; 3209f0d39aaaSBarry Smith v3 = a->a + diag[row - 2] + 3; 3210f0d39aaaSBarry Smith v4 = a->a + diag[row - 3] + 4; 3211f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 3212f0d39aaaSBarry Smith i1 = idx[0]; 3213f0d39aaaSBarry Smith i2 = idx[1]; 3214f0d39aaaSBarry Smith idx += 2; 3215f0d39aaaSBarry Smith tmp0 = x[i1]; 3216f0d39aaaSBarry Smith tmp1 = x[i2]; 32179371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 32189371c9d4SSatish Balay v1 += 2; 32199371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 32209371c9d4SSatish Balay v2 += 2; 32219371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 32229371c9d4SSatish Balay v3 += 2; 32239371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 32249371c9d4SSatish Balay v4 += 2; 3225f0d39aaaSBarry Smith } 3226f0d39aaaSBarry Smith 3227f0d39aaaSBarry Smith if (n == sz - 1) { 3228f0d39aaaSBarry Smith tmp0 = x[*idx]; 3229f0d39aaaSBarry Smith sum1 -= *v1 * tmp0; 3230f0d39aaaSBarry Smith sum2 -= *v2 * tmp0; 3231f0d39aaaSBarry Smith sum3 -= *v3 * tmp0; 3232f0d39aaaSBarry Smith sum4 -= *v4 * tmp0; 3233f0d39aaaSBarry Smith } 3234f0d39aaaSBarry Smith x[row--] = sum4 * ibdiag[3] + sum3 * ibdiag[7] + sum2 * ibdiag[11] + sum1 * ibdiag[15]; 3235f0d39aaaSBarry Smith x[row--] = sum4 * ibdiag[2] + sum3 * ibdiag[6] + sum2 * ibdiag[10] + sum1 * ibdiag[14]; 3236f0d39aaaSBarry Smith x[row--] = sum4 * ibdiag[1] + sum3 * ibdiag[5] + sum2 * ibdiag[9] + sum1 * ibdiag[13]; 3237f0d39aaaSBarry Smith x[row--] = sum4 * ibdiag[0] + sum3 * ibdiag[4] + sum2 * ibdiag[8] + sum1 * ibdiag[12]; 3238f0d39aaaSBarry Smith break; 3239f0d39aaaSBarry Smith case 5: 3240f0d39aaaSBarry Smith 3241f0d39aaaSBarry Smith sum1 = xb[row]; 3242f0d39aaaSBarry Smith sum2 = xb[row - 1]; 3243f0d39aaaSBarry Smith sum3 = xb[row - 2]; 3244f0d39aaaSBarry Smith sum4 = xb[row - 3]; 3245f0d39aaaSBarry Smith sum5 = xb[row - 4]; 3246f0d39aaaSBarry Smith v2 = a->a + diag[row - 1] + 2; 3247f0d39aaaSBarry Smith v3 = a->a + diag[row - 2] + 3; 3248f0d39aaaSBarry Smith v4 = a->a + diag[row - 3] + 4; 3249f0d39aaaSBarry Smith v5 = a->a + diag[row - 4] + 5; 3250f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 3251f0d39aaaSBarry Smith i1 = idx[0]; 3252f0d39aaaSBarry Smith i2 = idx[1]; 3253f0d39aaaSBarry Smith idx += 2; 3254f0d39aaaSBarry Smith tmp0 = x[i1]; 3255f0d39aaaSBarry Smith tmp1 = x[i2]; 32569371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 32579371c9d4SSatish Balay v1 += 2; 32589371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 32599371c9d4SSatish Balay v2 += 2; 32609371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 32619371c9d4SSatish Balay v3 += 2; 32629371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 32639371c9d4SSatish Balay v4 += 2; 32649371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 32659371c9d4SSatish Balay v5 += 2; 3266f0d39aaaSBarry Smith } 3267f0d39aaaSBarry Smith 3268f0d39aaaSBarry Smith if (n == sz - 1) { 3269f0d39aaaSBarry Smith tmp0 = x[*idx]; 3270f0d39aaaSBarry Smith sum1 -= *v1 * tmp0; 3271f0d39aaaSBarry Smith sum2 -= *v2 * tmp0; 3272f0d39aaaSBarry Smith sum3 -= *v3 * tmp0; 3273f0d39aaaSBarry Smith sum4 -= *v4 * tmp0; 3274f0d39aaaSBarry Smith sum5 -= *v5 * tmp0; 3275f0d39aaaSBarry Smith } 3276f0d39aaaSBarry Smith x[row--] = sum5 * ibdiag[4] + sum4 * ibdiag[9] + sum3 * ibdiag[14] + sum2 * ibdiag[19] + sum1 * ibdiag[24]; 3277f0d39aaaSBarry Smith x[row--] = sum5 * ibdiag[3] + sum4 * ibdiag[8] + sum3 * ibdiag[13] + sum2 * ibdiag[18] + sum1 * ibdiag[23]; 3278f0d39aaaSBarry Smith x[row--] = sum5 * ibdiag[2] + sum4 * ibdiag[7] + sum3 * ibdiag[12] + sum2 * ibdiag[17] + sum1 * ibdiag[22]; 3279f0d39aaaSBarry Smith x[row--] = sum5 * ibdiag[1] + sum4 * ibdiag[6] + sum3 * ibdiag[11] + sum2 * ibdiag[16] + sum1 * ibdiag[21]; 3280f0d39aaaSBarry Smith x[row--] = sum5 * ibdiag[0] + sum4 * ibdiag[5] + sum3 * ibdiag[10] + sum2 * ibdiag[15] + sum1 * ibdiag[20]; 32818862d2efSBarry Smith break; 3282d71ae5a4SJacob Faibussowitsch default: 32834d12350bSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not supported, node row %" PetscInt_FMT " size %" PetscInt_FMT, row, nodesz); 32848862d2efSBarry Smith } 32852af78befSBarry Smith } 32862af78befSBarry Smith 32879566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(a->nz)); 32882af78befSBarry Smith } 32892af78befSBarry Smith its--; 32905850ef23SBarry Smith } 32915850ef23SBarry Smith while (its--) { 32925850ef23SBarry Smith if (flag & SOR_FORWARD_SWEEP || flag & SOR_LOCAL_FORWARD_SWEEP) { 32934d12350bSJunchao Zhang for (i = 0, row = 0, ibdiag = a->inode.ibdiag; i < m; row += nodesz, ibdiag += nodesz * nodesz, i++) { 32944d12350bSJunchao Zhang nodesz = sizes[i + 1] - sizes[i]; 3295d876e2b0SMark Adams sz = diag[row] - ii[row]; 32965850ef23SBarry Smith v1 = a->a + ii[row]; 32975850ef23SBarry Smith idx = a->j + ii[row]; 32985850ef23SBarry Smith /* see comments for MatMult_SeqAIJ_Inode() for how this is coded */ 32994d12350bSJunchao Zhang switch (nodesz) { 33005850ef23SBarry Smith case 1: 33015850ef23SBarry Smith sum1 = b[row]; 33025850ef23SBarry Smith for (n = 0; n < sz - 1; n += 2) { 33035850ef23SBarry Smith i1 = idx[0]; 33045850ef23SBarry Smith i2 = idx[1]; 33055850ef23SBarry Smith idx += 2; 33065850ef23SBarry Smith tmp0 = x[i1]; 33075850ef23SBarry Smith tmp1 = x[i2]; 33089371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 33099371c9d4SSatish Balay v1 += 2; 33105850ef23SBarry Smith } 33115850ef23SBarry Smith if (n == sz - 1) { 3312d876e2b0SMark Adams tmp0 = x[*idx++]; 3313d876e2b0SMark Adams sum1 -= *v1 * tmp0; 3314d876e2b0SMark Adams v1++; 3315d876e2b0SMark Adams } 3316d876e2b0SMark Adams t[row] = sum1; 3317d876e2b0SMark Adams sz = ii[row + 1] - diag[row] - 1; 3318d876e2b0SMark Adams idx = a->j + diag[row] + 1; 3319d876e2b0SMark Adams v1 += 1; 3320d876e2b0SMark Adams for (n = 0; n < sz - 1; n += 2) { 3321d876e2b0SMark Adams i1 = idx[0]; 3322d876e2b0SMark Adams i2 = idx[1]; 3323d876e2b0SMark Adams idx += 2; 3324d876e2b0SMark Adams tmp0 = x[i1]; 3325d876e2b0SMark Adams tmp1 = x[i2]; 33269371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 33279371c9d4SSatish Balay v1 += 2; 3328d876e2b0SMark Adams } 3329d876e2b0SMark Adams if (n == sz - 1) { 3330d876e2b0SMark Adams tmp0 = x[*idx++]; 33315850ef23SBarry Smith sum1 -= *v1 * tmp0; 33325850ef23SBarry Smith } 33335850ef23SBarry Smith /* in MatSOR_SeqAIJ this line would be 33345850ef23SBarry Smith * 33355850ef23SBarry Smith * x[row] = (1-omega)*x[row]+(sum1+(*bdiag++)*x[row])*(*ibdiag++); 33365850ef23SBarry Smith * 33375850ef23SBarry Smith * but omega == 1, so this becomes 33385850ef23SBarry Smith * 3339d876e2b0SMark Adams * x[row] = sum1*(*ibdiag++); 33405850ef23SBarry Smith * 33415850ef23SBarry Smith */ 3342d876e2b0SMark Adams x[row] = sum1 * (*ibdiag); 33435850ef23SBarry Smith break; 33445850ef23SBarry Smith case 2: 33455850ef23SBarry Smith v2 = a->a + ii[row + 1]; 33465850ef23SBarry Smith sum1 = b[row]; 33475850ef23SBarry Smith sum2 = b[row + 1]; 33485850ef23SBarry Smith for (n = 0; n < sz - 1; n += 2) { 33495850ef23SBarry Smith i1 = idx[0]; 33505850ef23SBarry Smith i2 = idx[1]; 33515850ef23SBarry Smith idx += 2; 33525850ef23SBarry Smith tmp0 = x[i1]; 33535850ef23SBarry Smith tmp1 = x[i2]; 33549371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 33559371c9d4SSatish Balay v1 += 2; 33569371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 33579371c9d4SSatish Balay v2 += 2; 33585850ef23SBarry Smith } 3359d876e2b0SMark Adams if (n == sz - 1) { 3360d876e2b0SMark Adams tmp0 = x[*idx++]; 3361d876e2b0SMark Adams sum1 -= v1[0] * tmp0; 3362d876e2b0SMark Adams sum2 -= v2[0] * tmp0; 33639371c9d4SSatish Balay v1++; 33649371c9d4SSatish Balay v2++; 3365d876e2b0SMark Adams } 3366d876e2b0SMark Adams t[row] = sum1; 3367d876e2b0SMark Adams t[row + 1] = sum2; 3368d876e2b0SMark Adams sz = ii[row + 1] - diag[row] - 2; 3369d876e2b0SMark Adams idx = a->j + diag[row] + 2; 3370d876e2b0SMark Adams v1 += 2; 3371d876e2b0SMark Adams v2 += 2; 3372d876e2b0SMark Adams for (n = 0; n < sz - 1; n += 2) { 3373d876e2b0SMark Adams i1 = idx[0]; 3374d876e2b0SMark Adams i2 = idx[1]; 3375d876e2b0SMark Adams idx += 2; 3376d876e2b0SMark Adams tmp0 = x[i1]; 3377d876e2b0SMark Adams tmp1 = x[i2]; 33789371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 33799371c9d4SSatish Balay v1 += 2; 33809371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 33819371c9d4SSatish Balay v2 += 2; 3382d876e2b0SMark Adams } 33835850ef23SBarry Smith if (n == sz - 1) { 33845850ef23SBarry Smith tmp0 = x[*idx]; 33855850ef23SBarry Smith sum1 -= v1[0] * tmp0; 33865850ef23SBarry Smith sum2 -= v2[0] * tmp0; 33875850ef23SBarry Smith } 3388d876e2b0SMark Adams x[row] = sum1 * ibdiag[0] + sum2 * ibdiag[2]; 3389d876e2b0SMark Adams x[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[3]; 33905850ef23SBarry Smith break; 33915850ef23SBarry Smith case 3: 33925850ef23SBarry Smith v2 = a->a + ii[row + 1]; 33935850ef23SBarry Smith v3 = a->a + ii[row + 2]; 33945850ef23SBarry Smith sum1 = b[row]; 33955850ef23SBarry Smith sum2 = b[row + 1]; 33965850ef23SBarry Smith sum3 = b[row + 2]; 33975850ef23SBarry Smith for (n = 0; n < sz - 1; n += 2) { 33985850ef23SBarry Smith i1 = idx[0]; 33995850ef23SBarry Smith i2 = idx[1]; 34005850ef23SBarry Smith idx += 2; 34015850ef23SBarry Smith tmp0 = x[i1]; 34025850ef23SBarry Smith tmp1 = x[i2]; 34039371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 34049371c9d4SSatish Balay v1 += 2; 34059371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 34069371c9d4SSatish Balay v2 += 2; 34079371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 34089371c9d4SSatish Balay v3 += 2; 34095850ef23SBarry Smith } 3410d876e2b0SMark Adams if (n == sz - 1) { 3411d876e2b0SMark Adams tmp0 = x[*idx++]; 3412d876e2b0SMark Adams sum1 -= v1[0] * tmp0; 3413d876e2b0SMark Adams sum2 -= v2[0] * tmp0; 3414d876e2b0SMark Adams sum3 -= v3[0] * tmp0; 34159371c9d4SSatish Balay v1++; 34169371c9d4SSatish Balay v2++; 34179371c9d4SSatish Balay v3++; 3418d876e2b0SMark Adams } 3419d876e2b0SMark Adams t[row] = sum1; 3420d876e2b0SMark Adams t[row + 1] = sum2; 3421d876e2b0SMark Adams t[row + 2] = sum3; 3422d876e2b0SMark Adams sz = ii[row + 1] - diag[row] - 3; 3423d876e2b0SMark Adams idx = a->j + diag[row] + 3; 3424d876e2b0SMark Adams v1 += 3; 3425d876e2b0SMark Adams v2 += 3; 3426d876e2b0SMark Adams v3 += 3; 3427d876e2b0SMark Adams for (n = 0; n < sz - 1; n += 2) { 3428d876e2b0SMark Adams i1 = idx[0]; 3429d876e2b0SMark Adams i2 = idx[1]; 3430d876e2b0SMark Adams idx += 2; 3431d876e2b0SMark Adams tmp0 = x[i1]; 3432d876e2b0SMark Adams tmp1 = x[i2]; 34339371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 34349371c9d4SSatish Balay v1 += 2; 34359371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 34369371c9d4SSatish Balay v2 += 2; 34379371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 34389371c9d4SSatish Balay v3 += 2; 3439d876e2b0SMark Adams } 34405850ef23SBarry Smith if (n == sz - 1) { 34415850ef23SBarry Smith tmp0 = x[*idx]; 34425850ef23SBarry Smith sum1 -= v1[0] * tmp0; 34435850ef23SBarry Smith sum2 -= v2[0] * tmp0; 34445850ef23SBarry Smith sum3 -= v3[0] * tmp0; 34455850ef23SBarry Smith } 3446d876e2b0SMark Adams x[row] = sum1 * ibdiag[0] + sum2 * ibdiag[3] + sum3 * ibdiag[6]; 3447d876e2b0SMark Adams x[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[4] + sum3 * ibdiag[7]; 3448d876e2b0SMark Adams x[row + 2] = sum1 * ibdiag[2] + sum2 * ibdiag[5] + sum3 * ibdiag[8]; 34495850ef23SBarry Smith break; 34505850ef23SBarry Smith case 4: 34515850ef23SBarry Smith v2 = a->a + ii[row + 1]; 34525850ef23SBarry Smith v3 = a->a + ii[row + 2]; 34535850ef23SBarry Smith v4 = a->a + ii[row + 3]; 34545850ef23SBarry Smith sum1 = b[row]; 34555850ef23SBarry Smith sum2 = b[row + 1]; 34565850ef23SBarry Smith sum3 = b[row + 2]; 34575850ef23SBarry Smith sum4 = b[row + 3]; 34585850ef23SBarry Smith for (n = 0; n < sz - 1; n += 2) { 34595850ef23SBarry Smith i1 = idx[0]; 34605850ef23SBarry Smith i2 = idx[1]; 34615850ef23SBarry Smith idx += 2; 34625850ef23SBarry Smith tmp0 = x[i1]; 34635850ef23SBarry Smith tmp1 = x[i2]; 34649371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 34659371c9d4SSatish Balay v1 += 2; 34669371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 34679371c9d4SSatish Balay v2 += 2; 34689371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 34699371c9d4SSatish Balay v3 += 2; 34709371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 34719371c9d4SSatish Balay v4 += 2; 34725850ef23SBarry Smith } 3473d876e2b0SMark Adams if (n == sz - 1) { 3474d876e2b0SMark Adams tmp0 = x[*idx++]; 3475d876e2b0SMark Adams sum1 -= v1[0] * tmp0; 3476d876e2b0SMark Adams sum2 -= v2[0] * tmp0; 3477d876e2b0SMark Adams sum3 -= v3[0] * tmp0; 3478d876e2b0SMark Adams sum4 -= v4[0] * tmp0; 34799371c9d4SSatish Balay v1++; 34809371c9d4SSatish Balay v2++; 34819371c9d4SSatish Balay v3++; 34829371c9d4SSatish Balay v4++; 3483d876e2b0SMark Adams } 3484d876e2b0SMark Adams t[row] = sum1; 3485d876e2b0SMark Adams t[row + 1] = sum2; 3486d876e2b0SMark Adams t[row + 2] = sum3; 3487d876e2b0SMark Adams t[row + 3] = sum4; 3488d876e2b0SMark Adams sz = ii[row + 1] - diag[row] - 4; 3489d876e2b0SMark Adams idx = a->j + diag[row] + 4; 3490d876e2b0SMark Adams v1 += 4; 3491d876e2b0SMark Adams v2 += 4; 3492d876e2b0SMark Adams v3 += 4; 3493d876e2b0SMark Adams v4 += 4; 3494d876e2b0SMark Adams for (n = 0; n < sz - 1; n += 2) { 3495d876e2b0SMark Adams i1 = idx[0]; 3496d876e2b0SMark Adams i2 = idx[1]; 3497d876e2b0SMark Adams idx += 2; 3498d876e2b0SMark Adams tmp0 = x[i1]; 3499d876e2b0SMark Adams tmp1 = x[i2]; 35009371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 35019371c9d4SSatish Balay v1 += 2; 35029371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 35039371c9d4SSatish Balay v2 += 2; 35049371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 35059371c9d4SSatish Balay v3 += 2; 35069371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 35079371c9d4SSatish Balay v4 += 2; 3508d876e2b0SMark Adams } 35095850ef23SBarry Smith if (n == sz - 1) { 35105850ef23SBarry Smith tmp0 = x[*idx]; 35115850ef23SBarry Smith sum1 -= v1[0] * tmp0; 35125850ef23SBarry Smith sum2 -= v2[0] * tmp0; 35135850ef23SBarry Smith sum3 -= v3[0] * tmp0; 35145850ef23SBarry Smith sum4 -= v4[0] * tmp0; 35155850ef23SBarry Smith } 3516d876e2b0SMark Adams x[row] = sum1 * ibdiag[0] + sum2 * ibdiag[4] + sum3 * ibdiag[8] + sum4 * ibdiag[12]; 3517d876e2b0SMark Adams x[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[5] + sum3 * ibdiag[9] + sum4 * ibdiag[13]; 3518d876e2b0SMark Adams x[row + 2] = sum1 * ibdiag[2] + sum2 * ibdiag[6] + sum3 * ibdiag[10] + sum4 * ibdiag[14]; 3519d876e2b0SMark Adams x[row + 3] = sum1 * ibdiag[3] + sum2 * ibdiag[7] + sum3 * ibdiag[11] + sum4 * ibdiag[15]; 35205850ef23SBarry Smith break; 35215850ef23SBarry Smith case 5: 35225850ef23SBarry Smith v2 = a->a + ii[row + 1]; 35235850ef23SBarry Smith v3 = a->a + ii[row + 2]; 35245850ef23SBarry Smith v4 = a->a + ii[row + 3]; 35255850ef23SBarry Smith v5 = a->a + ii[row + 4]; 35265850ef23SBarry Smith sum1 = b[row]; 35275850ef23SBarry Smith sum2 = b[row + 1]; 35285850ef23SBarry Smith sum3 = b[row + 2]; 35295850ef23SBarry Smith sum4 = b[row + 3]; 35305850ef23SBarry Smith sum5 = b[row + 4]; 35315850ef23SBarry Smith for (n = 0; n < sz - 1; n += 2) { 35325850ef23SBarry Smith i1 = idx[0]; 35335850ef23SBarry Smith i2 = idx[1]; 35345850ef23SBarry Smith idx += 2; 35355850ef23SBarry Smith tmp0 = x[i1]; 35365850ef23SBarry Smith tmp1 = x[i2]; 35379371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 35389371c9d4SSatish Balay v1 += 2; 35399371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 35409371c9d4SSatish Balay v2 += 2; 35419371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 35429371c9d4SSatish Balay v3 += 2; 35439371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 35449371c9d4SSatish Balay v4 += 2; 35459371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 35469371c9d4SSatish Balay v5 += 2; 35475850ef23SBarry Smith } 35485850ef23SBarry Smith if (n == sz - 1) { 3549d876e2b0SMark Adams tmp0 = x[*idx++]; 35505850ef23SBarry Smith sum1 -= v1[0] * tmp0; 35515850ef23SBarry Smith sum2 -= v2[0] * tmp0; 35525850ef23SBarry Smith sum3 -= v3[0] * tmp0; 35535850ef23SBarry Smith sum4 -= v4[0] * tmp0; 35545850ef23SBarry Smith sum5 -= v5[0] * tmp0; 35559371c9d4SSatish Balay v1++; 35569371c9d4SSatish Balay v2++; 35579371c9d4SSatish Balay v3++; 35589371c9d4SSatish Balay v4++; 35599371c9d4SSatish Balay v5++; 35605850ef23SBarry Smith } 3561d876e2b0SMark Adams t[row] = sum1; 3562d876e2b0SMark Adams t[row + 1] = sum2; 3563d876e2b0SMark Adams t[row + 2] = sum3; 3564d876e2b0SMark Adams t[row + 3] = sum4; 3565d876e2b0SMark Adams t[row + 4] = sum5; 3566d876e2b0SMark Adams sz = ii[row + 1] - diag[row] - 5; 3567d876e2b0SMark Adams idx = a->j + diag[row] + 5; 3568d876e2b0SMark Adams v1 += 5; 3569d876e2b0SMark Adams v2 += 5; 3570d876e2b0SMark Adams v3 += 5; 3571d876e2b0SMark Adams v4 += 5; 3572d876e2b0SMark Adams v5 += 5; 35735850ef23SBarry Smith for (n = 0; n < sz - 1; n += 2) { 35745850ef23SBarry Smith i1 = idx[0]; 35755850ef23SBarry Smith i2 = idx[1]; 35765850ef23SBarry Smith idx += 2; 35775850ef23SBarry Smith tmp0 = x[i1]; 35785850ef23SBarry Smith tmp1 = x[i2]; 35799371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 35809371c9d4SSatish Balay v1 += 2; 35819371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 35829371c9d4SSatish Balay v2 += 2; 35839371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 35849371c9d4SSatish Balay v3 += 2; 35859371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 35869371c9d4SSatish Balay v4 += 2; 35879371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 35889371c9d4SSatish Balay v5 += 2; 35895850ef23SBarry Smith } 35905850ef23SBarry Smith if (n == sz - 1) { 35915850ef23SBarry Smith tmp0 = x[*idx]; 3592d876e2b0SMark Adams sum1 -= v1[0] * tmp0; 3593d876e2b0SMark Adams sum2 -= v2[0] * tmp0; 3594d876e2b0SMark Adams sum3 -= v3[0] * tmp0; 3595d876e2b0SMark Adams sum4 -= v4[0] * tmp0; 3596d876e2b0SMark Adams sum5 -= v5[0] * tmp0; 35975850ef23SBarry Smith } 3598d876e2b0SMark Adams x[row] = sum1 * ibdiag[0] + sum2 * ibdiag[5] + sum3 * ibdiag[10] + sum4 * ibdiag[15] + sum5 * ibdiag[20]; 3599d876e2b0SMark Adams x[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[6] + sum3 * ibdiag[11] + sum4 * ibdiag[16] + sum5 * ibdiag[21]; 3600d876e2b0SMark Adams x[row + 2] = sum1 * ibdiag[2] + sum2 * ibdiag[7] + sum3 * ibdiag[12] + sum4 * ibdiag[17] + sum5 * ibdiag[22]; 3601d876e2b0SMark Adams x[row + 3] = sum1 * ibdiag[3] + sum2 * ibdiag[8] + sum3 * ibdiag[13] + sum4 * ibdiag[18] + sum5 * ibdiag[23]; 3602d876e2b0SMark Adams x[row + 4] = sum1 * ibdiag[4] + sum2 * ibdiag[9] + sum3 * ibdiag[14] + sum4 * ibdiag[19] + sum5 * ibdiag[24]; 3603d876e2b0SMark Adams break; 3604d71ae5a4SJacob Faibussowitsch default: 36054d12350bSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not supported, node row %" PetscInt_FMT " size %" PetscInt_FMT, row, nodesz); 3606d876e2b0SMark Adams } 3607d876e2b0SMark Adams } 3608d876e2b0SMark Adams xb = t; 36099566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * a->nz)); /* undercounts diag inverse */ 3610d876e2b0SMark Adams } else xb = b; 3611d876e2b0SMark Adams 3612d876e2b0SMark Adams if (flag & SOR_BACKWARD_SWEEP || flag & SOR_LOCAL_BACKWARD_SWEEP) { 3613d876e2b0SMark Adams ibdiag = a->inode.ibdiag + a->inode.bdiagsize; 3614d876e2b0SMark Adams for (i = m - 1, row = A->rmap->n - 1; i >= 0; i--) { 36154d12350bSJunchao Zhang nodesz = sizes[i + 1] - sizes[i]; 36164d12350bSJunchao Zhang ibdiag -= nodesz * nodesz; 3617d876e2b0SMark Adams 3618d876e2b0SMark Adams /* set RHS */ 3619d876e2b0SMark Adams if (xb == b) { 3620d876e2b0SMark Adams /* whole (old way) */ 3621d876e2b0SMark Adams sz = ii[row + 1] - ii[row]; 3622d876e2b0SMark Adams idx = a->j + ii[row]; 36234d12350bSJunchao Zhang switch (nodesz) { 3624d71ae5a4SJacob Faibussowitsch case 5: 3625d71ae5a4SJacob Faibussowitsch v5 = a->a + ii[row - 4]; /* fall through */ 3626d71ae5a4SJacob Faibussowitsch case 4: 3627d71ae5a4SJacob Faibussowitsch v4 = a->a + ii[row - 3]; /* fall through */ 3628d71ae5a4SJacob Faibussowitsch case 3: 3629d71ae5a4SJacob Faibussowitsch v3 = a->a + ii[row - 2]; /* fall through */ 3630d71ae5a4SJacob Faibussowitsch case 2: 3631d71ae5a4SJacob Faibussowitsch v2 = a->a + ii[row - 1]; /* fall through */ 3632d71ae5a4SJacob Faibussowitsch case 1: 3633d71ae5a4SJacob Faibussowitsch v1 = a->a + ii[row]; 3634d71ae5a4SJacob Faibussowitsch break; 3635d71ae5a4SJacob Faibussowitsch default: 36364d12350bSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not supported, node row %" PetscInt_FMT " size %" PetscInt_FMT, row, nodesz); 3637d876e2b0SMark Adams } 3638d876e2b0SMark Adams } else { 3639d876e2b0SMark Adams /* upper, no diag */ 3640d876e2b0SMark Adams sz = ii[row + 1] - diag[row] - 1; 3641d876e2b0SMark Adams idx = a->j + diag[row] + 1; 36424d12350bSJunchao Zhang switch (nodesz) { 3643d71ae5a4SJacob Faibussowitsch case 5: 3644d71ae5a4SJacob Faibussowitsch v5 = a->a + diag[row - 4] + 5; /* fall through */ 3645d71ae5a4SJacob Faibussowitsch case 4: 3646d71ae5a4SJacob Faibussowitsch v4 = a->a + diag[row - 3] + 4; /* fall through */ 3647d71ae5a4SJacob Faibussowitsch case 3: 3648d71ae5a4SJacob Faibussowitsch v3 = a->a + diag[row - 2] + 3; /* fall through */ 3649d71ae5a4SJacob Faibussowitsch case 2: 3650d71ae5a4SJacob Faibussowitsch v2 = a->a + diag[row - 1] + 2; /* fall through */ 3651d71ae5a4SJacob Faibussowitsch case 1: 3652d71ae5a4SJacob Faibussowitsch v1 = a->a + diag[row] + 1; 3653d876e2b0SMark Adams } 3654d876e2b0SMark Adams } 3655d876e2b0SMark Adams /* set sum */ 36564d12350bSJunchao Zhang switch (nodesz) { 3657d71ae5a4SJacob Faibussowitsch case 5: 3658d71ae5a4SJacob Faibussowitsch sum5 = xb[row - 4]; /* fall through */ 3659d71ae5a4SJacob Faibussowitsch case 4: 3660d71ae5a4SJacob Faibussowitsch sum4 = xb[row - 3]; /* fall through */ 3661d71ae5a4SJacob Faibussowitsch case 3: 3662d71ae5a4SJacob Faibussowitsch sum3 = xb[row - 2]; /* fall through */ 3663d71ae5a4SJacob Faibussowitsch case 2: 3664d71ae5a4SJacob Faibussowitsch sum2 = xb[row - 1]; /* fall through */ 3665d876e2b0SMark Adams case 1: 3666d876e2b0SMark Adams /* note that sum1 is associated with the last row */ 3667d876e2b0SMark Adams sum1 = xb[row]; 3668d876e2b0SMark Adams } 3669d876e2b0SMark Adams /* do sums */ 3670d876e2b0SMark Adams for (n = 0; n < sz - 1; n += 2) { 3671d876e2b0SMark Adams i1 = idx[0]; 3672d876e2b0SMark Adams i2 = idx[1]; 3673d876e2b0SMark Adams idx += 2; 3674d876e2b0SMark Adams tmp0 = x[i1]; 3675d876e2b0SMark Adams tmp1 = x[i2]; 36764d12350bSJunchao Zhang switch (nodesz) { 3677d71ae5a4SJacob Faibussowitsch case 5: 3678d71ae5a4SJacob Faibussowitsch sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 3679d71ae5a4SJacob Faibussowitsch v5 += 2; /* fall through */ 3680d71ae5a4SJacob Faibussowitsch case 4: 3681d71ae5a4SJacob Faibussowitsch sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 3682d71ae5a4SJacob Faibussowitsch v4 += 2; /* fall through */ 3683d71ae5a4SJacob Faibussowitsch case 3: 3684d71ae5a4SJacob Faibussowitsch sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 3685d71ae5a4SJacob Faibussowitsch v3 += 2; /* fall through */ 3686d71ae5a4SJacob Faibussowitsch case 2: 3687d71ae5a4SJacob Faibussowitsch sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 3688d71ae5a4SJacob Faibussowitsch v2 += 2; /* fall through */ 3689d71ae5a4SJacob Faibussowitsch case 1: 3690d71ae5a4SJacob Faibussowitsch sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 3691d71ae5a4SJacob Faibussowitsch v1 += 2; 3692d876e2b0SMark Adams } 3693d876e2b0SMark Adams } 3694d876e2b0SMark Adams /* ragged edge */ 3695d876e2b0SMark Adams if (n == sz - 1) { 3696d876e2b0SMark Adams tmp0 = x[*idx]; 36974d12350bSJunchao Zhang switch (nodesz) { 3698d71ae5a4SJacob Faibussowitsch case 5: 3699d71ae5a4SJacob Faibussowitsch sum5 -= *v5 * tmp0; /* fall through */ 3700d71ae5a4SJacob Faibussowitsch case 4: 3701d71ae5a4SJacob Faibussowitsch sum4 -= *v4 * tmp0; /* fall through */ 3702d71ae5a4SJacob Faibussowitsch case 3: 3703d71ae5a4SJacob Faibussowitsch sum3 -= *v3 * tmp0; /* fall through */ 3704d71ae5a4SJacob Faibussowitsch case 2: 3705d71ae5a4SJacob Faibussowitsch sum2 -= *v2 * tmp0; /* fall through */ 3706d71ae5a4SJacob Faibussowitsch case 1: 3707d71ae5a4SJacob Faibussowitsch sum1 -= *v1 * tmp0; 3708d876e2b0SMark Adams } 3709d876e2b0SMark Adams } 3710d876e2b0SMark Adams /* update */ 3711d876e2b0SMark Adams if (xb == b) { 3712d876e2b0SMark Adams /* whole (old way) w/ diag */ 37134d12350bSJunchao Zhang switch (nodesz) { 3714d876e2b0SMark Adams case 5: 37155850ef23SBarry Smith x[row--] += sum5 * ibdiag[4] + sum4 * ibdiag[9] + sum3 * ibdiag[14] + sum2 * ibdiag[19] + sum1 * ibdiag[24]; 37165850ef23SBarry Smith x[row--] += sum5 * ibdiag[3] + sum4 * ibdiag[8] + sum3 * ibdiag[13] + sum2 * ibdiag[18] + sum1 * ibdiag[23]; 37175850ef23SBarry Smith x[row--] += sum5 * ibdiag[2] + sum4 * ibdiag[7] + sum3 * ibdiag[12] + sum2 * ibdiag[17] + sum1 * ibdiag[22]; 37185850ef23SBarry Smith x[row--] += sum5 * ibdiag[1] + sum4 * ibdiag[6] + sum3 * ibdiag[11] + sum2 * ibdiag[16] + sum1 * ibdiag[21]; 37195850ef23SBarry Smith x[row--] += sum5 * ibdiag[0] + sum4 * ibdiag[5] + sum3 * ibdiag[10] + sum2 * ibdiag[15] + sum1 * ibdiag[20]; 37205850ef23SBarry Smith break; 3721d876e2b0SMark Adams case 4: 3722d876e2b0SMark Adams x[row--] += sum4 * ibdiag[3] + sum3 * ibdiag[7] + sum2 * ibdiag[11] + sum1 * ibdiag[15]; 3723d876e2b0SMark Adams x[row--] += sum4 * ibdiag[2] + sum3 * ibdiag[6] + sum2 * ibdiag[10] + sum1 * ibdiag[14]; 3724d876e2b0SMark Adams x[row--] += sum4 * ibdiag[1] + sum3 * ibdiag[5] + sum2 * ibdiag[9] + sum1 * ibdiag[13]; 3725d876e2b0SMark Adams x[row--] += sum4 * ibdiag[0] + sum3 * ibdiag[4] + sum2 * ibdiag[8] + sum1 * ibdiag[12]; 3726d876e2b0SMark Adams break; 3727d876e2b0SMark Adams case 3: 3728d876e2b0SMark Adams x[row--] += sum3 * ibdiag[2] + sum2 * ibdiag[5] + sum1 * ibdiag[8]; 3729d876e2b0SMark Adams x[row--] += sum3 * ibdiag[1] + sum2 * ibdiag[4] + sum1 * ibdiag[7]; 3730d876e2b0SMark Adams x[row--] += sum3 * ibdiag[0] + sum2 * ibdiag[3] + sum1 * ibdiag[6]; 3731d876e2b0SMark Adams break; 3732d876e2b0SMark Adams case 2: 3733d876e2b0SMark Adams x[row--] += sum2 * ibdiag[1] + sum1 * ibdiag[3]; 3734d876e2b0SMark Adams x[row--] += sum2 * ibdiag[0] + sum1 * ibdiag[2]; 3735d876e2b0SMark Adams break; 3736d71ae5a4SJacob Faibussowitsch case 1: 3737d71ae5a4SJacob Faibussowitsch x[row--] += sum1 * (*ibdiag); 3738d71ae5a4SJacob Faibussowitsch break; 3739d876e2b0SMark Adams } 3740d876e2b0SMark Adams } else { 3741d876e2b0SMark Adams /* no diag so set = */ 37424d12350bSJunchao Zhang switch (nodesz) { 3743d876e2b0SMark Adams case 5: 3744d876e2b0SMark Adams x[row--] = sum5 * ibdiag[4] + sum4 * ibdiag[9] + sum3 * ibdiag[14] + sum2 * ibdiag[19] + sum1 * ibdiag[24]; 3745d876e2b0SMark Adams x[row--] = sum5 * ibdiag[3] + sum4 * ibdiag[8] + sum3 * ibdiag[13] + sum2 * ibdiag[18] + sum1 * ibdiag[23]; 3746d876e2b0SMark Adams x[row--] = sum5 * ibdiag[2] + sum4 * ibdiag[7] + sum3 * ibdiag[12] + sum2 * ibdiag[17] + sum1 * ibdiag[22]; 3747d876e2b0SMark Adams x[row--] = sum5 * ibdiag[1] + sum4 * ibdiag[6] + sum3 * ibdiag[11] + sum2 * ibdiag[16] + sum1 * ibdiag[21]; 3748d876e2b0SMark Adams x[row--] = sum5 * ibdiag[0] + sum4 * ibdiag[5] + sum3 * ibdiag[10] + sum2 * ibdiag[15] + sum1 * ibdiag[20]; 3749d876e2b0SMark Adams break; 3750d876e2b0SMark Adams case 4: 3751d876e2b0SMark Adams x[row--] = sum4 * ibdiag[3] + sum3 * ibdiag[7] + sum2 * ibdiag[11] + sum1 * ibdiag[15]; 3752d876e2b0SMark Adams x[row--] = sum4 * ibdiag[2] + sum3 * ibdiag[6] + sum2 * ibdiag[10] + sum1 * ibdiag[14]; 3753d876e2b0SMark Adams x[row--] = sum4 * ibdiag[1] + sum3 * ibdiag[5] + sum2 * ibdiag[9] + sum1 * ibdiag[13]; 3754d876e2b0SMark Adams x[row--] = sum4 * ibdiag[0] + sum3 * ibdiag[4] + sum2 * ibdiag[8] + sum1 * ibdiag[12]; 3755d876e2b0SMark Adams break; 3756d876e2b0SMark Adams case 3: 3757d876e2b0SMark Adams x[row--] = sum3 * ibdiag[2] + sum2 * ibdiag[5] + sum1 * ibdiag[8]; 3758d876e2b0SMark Adams x[row--] = sum3 * ibdiag[1] + sum2 * ibdiag[4] + sum1 * ibdiag[7]; 3759d876e2b0SMark Adams x[row--] = sum3 * ibdiag[0] + sum2 * ibdiag[3] + sum1 * ibdiag[6]; 3760d876e2b0SMark Adams break; 3761d876e2b0SMark Adams case 2: 3762d876e2b0SMark Adams x[row--] = sum2 * ibdiag[1] + sum1 * ibdiag[3]; 3763d876e2b0SMark Adams x[row--] = sum2 * ibdiag[0] + sum1 * ibdiag[2]; 3764d876e2b0SMark Adams break; 3765d71ae5a4SJacob Faibussowitsch case 1: 3766d71ae5a4SJacob Faibussowitsch x[row--] = sum1 * (*ibdiag); 3767d71ae5a4SJacob Faibussowitsch break; 37685850ef23SBarry Smith } 37695850ef23SBarry Smith } 3770d876e2b0SMark Adams } 3771d876e2b0SMark Adams if (xb == b) { 37729566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * a->nz)); 3773d876e2b0SMark Adams } else { 37749566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(a->nz)); /* assumes 1/2 in upper, undercounts diag inverse */ 3775d876e2b0SMark Adams } 37765850ef23SBarry Smith } 37772af78befSBarry Smith } 377889c6957cSBarry Smith if (flag & SOR_EISENSTAT) { 377989c6957cSBarry Smith /* 378089c6957cSBarry Smith Apply (U + D)^-1 where D is now the block diagonal 378189c6957cSBarry Smith */ 378289c6957cSBarry Smith ibdiag = a->inode.ibdiag + a->inode.bdiagsize; 378389c6957cSBarry Smith for (i = m - 1, row = A->rmap->n - 1; i >= 0; i--) { 37844d12350bSJunchao Zhang nodesz = sizes[i + 1] - sizes[i]; 37854d12350bSJunchao Zhang ibdiag -= nodesz * nodesz; 378689c6957cSBarry Smith sz = ii[row + 1] - diag[row] - 1; 378789c6957cSBarry Smith v1 = a->a + diag[row] + 1; 378889c6957cSBarry Smith idx = a->j + diag[row] + 1; 37894108e4d5SBarry Smith /* see comments for MatMult_SeqAIJ_Inode() for how this is coded */ 37904d12350bSJunchao Zhang switch (nodesz) { 379189c6957cSBarry Smith case 1: 379289c6957cSBarry Smith 379389c6957cSBarry Smith sum1 = b[row]; 379489c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 379589c6957cSBarry Smith i1 = idx[0]; 379689c6957cSBarry Smith i2 = idx[1]; 379789c6957cSBarry Smith idx += 2; 379889c6957cSBarry Smith tmp0 = x[i1]; 379989c6957cSBarry Smith tmp1 = x[i2]; 38009371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 38019371c9d4SSatish Balay v1 += 2; 380289c6957cSBarry Smith } 380389c6957cSBarry Smith 380489c6957cSBarry Smith if (n == sz - 1) { 380589c6957cSBarry Smith tmp0 = x[*idx]; 380689c6957cSBarry Smith sum1 -= *v1 * tmp0; 380789c6957cSBarry Smith } 38089371c9d4SSatish Balay x[row] = sum1 * (*ibdiag); 38099371c9d4SSatish Balay row--; 381089c6957cSBarry Smith break; 381189c6957cSBarry Smith 381289c6957cSBarry Smith case 2: 381389c6957cSBarry Smith 381489c6957cSBarry Smith sum1 = b[row]; 381589c6957cSBarry Smith sum2 = b[row - 1]; 381689c6957cSBarry Smith /* note that sum1 is associated with the second of the two rows */ 381789c6957cSBarry Smith v2 = a->a + diag[row - 1] + 2; 381889c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 381989c6957cSBarry Smith i1 = idx[0]; 382089c6957cSBarry Smith i2 = idx[1]; 382189c6957cSBarry Smith idx += 2; 382289c6957cSBarry Smith tmp0 = x[i1]; 382389c6957cSBarry Smith tmp1 = x[i2]; 38249371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 38259371c9d4SSatish Balay v1 += 2; 38269371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 38279371c9d4SSatish Balay v2 += 2; 382889c6957cSBarry Smith } 382989c6957cSBarry Smith 383089c6957cSBarry Smith if (n == sz - 1) { 383189c6957cSBarry Smith tmp0 = x[*idx]; 383289c6957cSBarry Smith sum1 -= *v1 * tmp0; 383389c6957cSBarry Smith sum2 -= *v2 * tmp0; 383489c6957cSBarry Smith } 3835938d4eb3SBarry Smith x[row] = sum2 * ibdiag[1] + sum1 * ibdiag[3]; 3836938d4eb3SBarry Smith x[row - 1] = sum2 * ibdiag[0] + sum1 * ibdiag[2]; 3837938d4eb3SBarry Smith row -= 2; 383889c6957cSBarry Smith break; 383989c6957cSBarry Smith case 3: 384089c6957cSBarry Smith 384189c6957cSBarry Smith sum1 = b[row]; 384289c6957cSBarry Smith sum2 = b[row - 1]; 384389c6957cSBarry Smith sum3 = b[row - 2]; 384489c6957cSBarry Smith v2 = a->a + diag[row - 1] + 2; 384589c6957cSBarry Smith v3 = a->a + diag[row - 2] + 3; 384689c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 384789c6957cSBarry Smith i1 = idx[0]; 384889c6957cSBarry Smith i2 = idx[1]; 384989c6957cSBarry Smith idx += 2; 385089c6957cSBarry Smith tmp0 = x[i1]; 385189c6957cSBarry Smith tmp1 = x[i2]; 38529371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 38539371c9d4SSatish Balay v1 += 2; 38549371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 38559371c9d4SSatish Balay v2 += 2; 38569371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 38579371c9d4SSatish Balay v3 += 2; 385889c6957cSBarry Smith } 385989c6957cSBarry Smith 386089c6957cSBarry Smith if (n == sz - 1) { 386189c6957cSBarry Smith tmp0 = x[*idx]; 386289c6957cSBarry Smith sum1 -= *v1 * tmp0; 386389c6957cSBarry Smith sum2 -= *v2 * tmp0; 386489c6957cSBarry Smith sum3 -= *v3 * tmp0; 386589c6957cSBarry Smith } 3866938d4eb3SBarry Smith x[row] = sum3 * ibdiag[2] + sum2 * ibdiag[5] + sum1 * ibdiag[8]; 3867938d4eb3SBarry Smith x[row - 1] = sum3 * ibdiag[1] + sum2 * ibdiag[4] + sum1 * ibdiag[7]; 3868938d4eb3SBarry Smith x[row - 2] = sum3 * ibdiag[0] + sum2 * ibdiag[3] + sum1 * ibdiag[6]; 3869938d4eb3SBarry Smith row -= 3; 387089c6957cSBarry Smith break; 387189c6957cSBarry Smith case 4: 387289c6957cSBarry Smith 387389c6957cSBarry Smith sum1 = b[row]; 387489c6957cSBarry Smith sum2 = b[row - 1]; 387589c6957cSBarry Smith sum3 = b[row - 2]; 387689c6957cSBarry Smith sum4 = b[row - 3]; 387789c6957cSBarry Smith v2 = a->a + diag[row - 1] + 2; 387889c6957cSBarry Smith v3 = a->a + diag[row - 2] + 3; 387989c6957cSBarry Smith v4 = a->a + diag[row - 3] + 4; 388089c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 388189c6957cSBarry Smith i1 = idx[0]; 388289c6957cSBarry Smith i2 = idx[1]; 388389c6957cSBarry Smith idx += 2; 388489c6957cSBarry Smith tmp0 = x[i1]; 388589c6957cSBarry Smith tmp1 = x[i2]; 38869371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 38879371c9d4SSatish Balay v1 += 2; 38889371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 38899371c9d4SSatish Balay v2 += 2; 38909371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 38919371c9d4SSatish Balay v3 += 2; 38929371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 38939371c9d4SSatish Balay v4 += 2; 389489c6957cSBarry Smith } 389589c6957cSBarry Smith 389689c6957cSBarry Smith if (n == sz - 1) { 389789c6957cSBarry Smith tmp0 = x[*idx]; 389889c6957cSBarry Smith sum1 -= *v1 * tmp0; 389989c6957cSBarry Smith sum2 -= *v2 * tmp0; 390089c6957cSBarry Smith sum3 -= *v3 * tmp0; 390189c6957cSBarry Smith sum4 -= *v4 * tmp0; 390289c6957cSBarry Smith } 3903938d4eb3SBarry Smith x[row] = sum4 * ibdiag[3] + sum3 * ibdiag[7] + sum2 * ibdiag[11] + sum1 * ibdiag[15]; 3904938d4eb3SBarry Smith x[row - 1] = sum4 * ibdiag[2] + sum3 * ibdiag[6] + sum2 * ibdiag[10] + sum1 * ibdiag[14]; 3905938d4eb3SBarry Smith x[row - 2] = sum4 * ibdiag[1] + sum3 * ibdiag[5] + sum2 * ibdiag[9] + sum1 * ibdiag[13]; 3906938d4eb3SBarry Smith x[row - 3] = sum4 * ibdiag[0] + sum3 * ibdiag[4] + sum2 * ibdiag[8] + sum1 * ibdiag[12]; 3907938d4eb3SBarry Smith row -= 4; 390889c6957cSBarry Smith break; 390989c6957cSBarry Smith case 5: 391089c6957cSBarry Smith 391189c6957cSBarry Smith sum1 = b[row]; 391289c6957cSBarry Smith sum2 = b[row - 1]; 391389c6957cSBarry Smith sum3 = b[row - 2]; 391489c6957cSBarry Smith sum4 = b[row - 3]; 391589c6957cSBarry Smith sum5 = b[row - 4]; 391689c6957cSBarry Smith v2 = a->a + diag[row - 1] + 2; 391789c6957cSBarry Smith v3 = a->a + diag[row - 2] + 3; 391889c6957cSBarry Smith v4 = a->a + diag[row - 3] + 4; 391989c6957cSBarry Smith v5 = a->a + diag[row - 4] + 5; 392089c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 392189c6957cSBarry Smith i1 = idx[0]; 392289c6957cSBarry Smith i2 = idx[1]; 392389c6957cSBarry Smith idx += 2; 392489c6957cSBarry Smith tmp0 = x[i1]; 392589c6957cSBarry Smith tmp1 = x[i2]; 39269371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 39279371c9d4SSatish Balay v1 += 2; 39289371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 39299371c9d4SSatish Balay v2 += 2; 39309371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 39319371c9d4SSatish Balay v3 += 2; 39329371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 39339371c9d4SSatish Balay v4 += 2; 39349371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 39359371c9d4SSatish Balay v5 += 2; 393689c6957cSBarry Smith } 393789c6957cSBarry Smith 393889c6957cSBarry Smith if (n == sz - 1) { 393989c6957cSBarry Smith tmp0 = x[*idx]; 394089c6957cSBarry Smith sum1 -= *v1 * tmp0; 394189c6957cSBarry Smith sum2 -= *v2 * tmp0; 394289c6957cSBarry Smith sum3 -= *v3 * tmp0; 394389c6957cSBarry Smith sum4 -= *v4 * tmp0; 394489c6957cSBarry Smith sum5 -= *v5 * tmp0; 394589c6957cSBarry Smith } 3946938d4eb3SBarry Smith x[row] = sum5 * ibdiag[4] + sum4 * ibdiag[9] + sum3 * ibdiag[14] + sum2 * ibdiag[19] + sum1 * ibdiag[24]; 3947938d4eb3SBarry Smith x[row - 1] = sum5 * ibdiag[3] + sum4 * ibdiag[8] + sum3 * ibdiag[13] + sum2 * ibdiag[18] + sum1 * ibdiag[23]; 3948938d4eb3SBarry Smith x[row - 2] = sum5 * ibdiag[2] + sum4 * ibdiag[7] + sum3 * ibdiag[12] + sum2 * ibdiag[17] + sum1 * ibdiag[22]; 3949938d4eb3SBarry Smith x[row - 3] = sum5 * ibdiag[1] + sum4 * ibdiag[6] + sum3 * ibdiag[11] + sum2 * ibdiag[16] + sum1 * ibdiag[21]; 3950938d4eb3SBarry Smith x[row - 4] = sum5 * ibdiag[0] + sum4 * ibdiag[5] + sum3 * ibdiag[10] + sum2 * ibdiag[15] + sum1 * ibdiag[20]; 3951938d4eb3SBarry Smith row -= 5; 395289c6957cSBarry Smith break; 3953d71ae5a4SJacob Faibussowitsch default: 39544d12350bSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not supported, node row %" PetscInt_FMT " size %" PetscInt_FMT, row, nodesz); 395589c6957cSBarry Smith } 395689c6957cSBarry Smith } 39579566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(a->nz)); 395889c6957cSBarry Smith 395989c6957cSBarry Smith /* 396089c6957cSBarry Smith t = b - D x where D is the block diagonal 396189c6957cSBarry Smith */ 396289c6957cSBarry Smith cnt = 0; 396389c6957cSBarry Smith for (i = 0, row = 0; i < m; i++) { 39644d12350bSJunchao Zhang nodesz = sizes[i + 1] - sizes[i]; 39654d12350bSJunchao Zhang switch (nodesz) { 396689c6957cSBarry Smith case 1: 39679371c9d4SSatish Balay t[row] = b[row] - bdiag[cnt++] * x[row]; 39689371c9d4SSatish Balay row++; 396989c6957cSBarry Smith break; 397089c6957cSBarry Smith case 2: 39719371c9d4SSatish Balay x1 = x[row]; 39729371c9d4SSatish Balay x2 = x[row + 1]; 397389c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 2]; 397489c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 3]; 397589c6957cSBarry Smith t[row] = b[row] - tmp1; 39769371c9d4SSatish Balay t[row + 1] = b[row + 1] - tmp2; 39779371c9d4SSatish Balay row += 2; 397889c6957cSBarry Smith cnt += 4; 397989c6957cSBarry Smith break; 398089c6957cSBarry Smith case 3: 39819371c9d4SSatish Balay x1 = x[row]; 39829371c9d4SSatish Balay x2 = x[row + 1]; 39839371c9d4SSatish Balay x3 = x[row + 2]; 398489c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 3] + x3 * bdiag[cnt + 6]; 398589c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 4] + x3 * bdiag[cnt + 7]; 398689c6957cSBarry Smith tmp3 = x1 * bdiag[cnt + 2] + x2 * bdiag[cnt + 5] + x3 * bdiag[cnt + 8]; 398789c6957cSBarry Smith t[row] = b[row] - tmp1; 398889c6957cSBarry Smith t[row + 1] = b[row + 1] - tmp2; 39899371c9d4SSatish Balay t[row + 2] = b[row + 2] - tmp3; 39909371c9d4SSatish Balay row += 3; 399189c6957cSBarry Smith cnt += 9; 399289c6957cSBarry Smith break; 399389c6957cSBarry Smith case 4: 39949371c9d4SSatish Balay x1 = x[row]; 39959371c9d4SSatish Balay x2 = x[row + 1]; 39969371c9d4SSatish Balay x3 = x[row + 2]; 39979371c9d4SSatish Balay x4 = x[row + 3]; 399889c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 4] + x3 * bdiag[cnt + 8] + x4 * bdiag[cnt + 12]; 399989c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 5] + x3 * bdiag[cnt + 9] + x4 * bdiag[cnt + 13]; 400089c6957cSBarry Smith tmp3 = x1 * bdiag[cnt + 2] + x2 * bdiag[cnt + 6] + x3 * bdiag[cnt + 10] + x4 * bdiag[cnt + 14]; 400189c6957cSBarry Smith tmp4 = x1 * bdiag[cnt + 3] + x2 * bdiag[cnt + 7] + x3 * bdiag[cnt + 11] + x4 * bdiag[cnt + 15]; 400289c6957cSBarry Smith t[row] = b[row] - tmp1; 400389c6957cSBarry Smith t[row + 1] = b[row + 1] - tmp2; 400489c6957cSBarry Smith t[row + 2] = b[row + 2] - tmp3; 40059371c9d4SSatish Balay t[row + 3] = b[row + 3] - tmp4; 40069371c9d4SSatish Balay row += 4; 400789c6957cSBarry Smith cnt += 16; 400889c6957cSBarry Smith break; 400989c6957cSBarry Smith case 5: 40109371c9d4SSatish Balay x1 = x[row]; 40119371c9d4SSatish Balay x2 = x[row + 1]; 40129371c9d4SSatish Balay x3 = x[row + 2]; 40139371c9d4SSatish Balay x4 = x[row + 3]; 40149371c9d4SSatish Balay x5 = x[row + 4]; 401589c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 5] + x3 * bdiag[cnt + 10] + x4 * bdiag[cnt + 15] + x5 * bdiag[cnt + 20]; 401689c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 6] + x3 * bdiag[cnt + 11] + x4 * bdiag[cnt + 16] + x5 * bdiag[cnt + 21]; 401789c6957cSBarry Smith tmp3 = x1 * bdiag[cnt + 2] + x2 * bdiag[cnt + 7] + x3 * bdiag[cnt + 12] + x4 * bdiag[cnt + 17] + x5 * bdiag[cnt + 22]; 401889c6957cSBarry Smith tmp4 = x1 * bdiag[cnt + 3] + x2 * bdiag[cnt + 8] + x3 * bdiag[cnt + 13] + x4 * bdiag[cnt + 18] + x5 * bdiag[cnt + 23]; 401989c6957cSBarry Smith tmp5 = x1 * bdiag[cnt + 4] + x2 * bdiag[cnt + 9] + x3 * bdiag[cnt + 14] + x4 * bdiag[cnt + 19] + x5 * bdiag[cnt + 24]; 402089c6957cSBarry Smith t[row] = b[row] - tmp1; 402189c6957cSBarry Smith t[row + 1] = b[row + 1] - tmp2; 402289c6957cSBarry Smith t[row + 2] = b[row + 2] - tmp3; 402389c6957cSBarry Smith t[row + 3] = b[row + 3] - tmp4; 40249371c9d4SSatish Balay t[row + 4] = b[row + 4] - tmp5; 40259371c9d4SSatish Balay row += 5; 402689c6957cSBarry Smith cnt += 25; 402789c6957cSBarry Smith break; 4028d71ae5a4SJacob Faibussowitsch default: 40294d12350bSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not supported, node row %" PetscInt_FMT " size %" PetscInt_FMT, row, nodesz); 403089c6957cSBarry Smith } 403189c6957cSBarry Smith } 40329566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(m)); 403389c6957cSBarry Smith 403489c6957cSBarry Smith /* 403589c6957cSBarry Smith Apply (L + D)^-1 where D is the block diagonal 403689c6957cSBarry Smith */ 403789c6957cSBarry Smith for (i = 0, row = 0; i < m; i++) { 40384d12350bSJunchao Zhang nodesz = sizes[i + 1] - sizes[i]; 403989c6957cSBarry Smith sz = diag[row] - ii[row]; 404089c6957cSBarry Smith v1 = a->a + ii[row]; 404189c6957cSBarry Smith idx = a->j + ii[row]; 40424108e4d5SBarry Smith /* see comments for MatMult_SeqAIJ_Inode() for how this is coded */ 40434d12350bSJunchao Zhang switch (nodesz) { 404489c6957cSBarry Smith case 1: 404589c6957cSBarry Smith 404689c6957cSBarry Smith sum1 = t[row]; 404789c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 404889c6957cSBarry Smith i1 = idx[0]; 404989c6957cSBarry Smith i2 = idx[1]; 405089c6957cSBarry Smith idx += 2; 405189c6957cSBarry Smith tmp0 = t[i1]; 405289c6957cSBarry Smith tmp1 = t[i2]; 40539371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 40549371c9d4SSatish Balay v1 += 2; 405589c6957cSBarry Smith } 405689c6957cSBarry Smith 405789c6957cSBarry Smith if (n == sz - 1) { 405889c6957cSBarry Smith tmp0 = t[*idx]; 405989c6957cSBarry Smith sum1 -= *v1 * tmp0; 406089c6957cSBarry Smith } 40619371c9d4SSatish Balay x[row] += t[row] = sum1 * (*ibdiag++); 40629371c9d4SSatish Balay row++; 406389c6957cSBarry Smith break; 406489c6957cSBarry Smith case 2: 406589c6957cSBarry Smith v2 = a->a + ii[row + 1]; 406689c6957cSBarry Smith sum1 = t[row]; 406789c6957cSBarry Smith sum2 = t[row + 1]; 406889c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 406989c6957cSBarry Smith i1 = idx[0]; 407089c6957cSBarry Smith i2 = idx[1]; 407189c6957cSBarry Smith idx += 2; 407289c6957cSBarry Smith tmp0 = t[i1]; 407389c6957cSBarry Smith tmp1 = t[i2]; 40749371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 40759371c9d4SSatish Balay v1 += 2; 40769371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 40779371c9d4SSatish Balay v2 += 2; 407889c6957cSBarry Smith } 407989c6957cSBarry Smith 408089c6957cSBarry Smith if (n == sz - 1) { 408189c6957cSBarry Smith tmp0 = t[*idx]; 408289c6957cSBarry Smith sum1 -= v1[0] * tmp0; 408389c6957cSBarry Smith sum2 -= v2[0] * tmp0; 408489c6957cSBarry Smith } 408589c6957cSBarry Smith x[row] += t[row] = sum1 * ibdiag[0] + sum2 * ibdiag[2]; 408689c6957cSBarry Smith x[row + 1] += t[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[3]; 40879371c9d4SSatish Balay ibdiag += 4; 40889371c9d4SSatish Balay row += 2; 408989c6957cSBarry Smith break; 409089c6957cSBarry Smith case 3: 409189c6957cSBarry Smith v2 = a->a + ii[row + 1]; 409289c6957cSBarry Smith v3 = a->a + ii[row + 2]; 409389c6957cSBarry Smith sum1 = t[row]; 409489c6957cSBarry Smith sum2 = t[row + 1]; 409589c6957cSBarry Smith sum3 = t[row + 2]; 409689c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 409789c6957cSBarry Smith i1 = idx[0]; 409889c6957cSBarry Smith i2 = idx[1]; 409989c6957cSBarry Smith idx += 2; 410089c6957cSBarry Smith tmp0 = t[i1]; 410189c6957cSBarry Smith tmp1 = t[i2]; 41029371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 41039371c9d4SSatish Balay v1 += 2; 41049371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 41059371c9d4SSatish Balay v2 += 2; 41069371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 41079371c9d4SSatish Balay v3 += 2; 410889c6957cSBarry Smith } 410989c6957cSBarry Smith 411089c6957cSBarry Smith if (n == sz - 1) { 411189c6957cSBarry Smith tmp0 = t[*idx]; 411289c6957cSBarry Smith sum1 -= v1[0] * tmp0; 411389c6957cSBarry Smith sum2 -= v2[0] * tmp0; 411489c6957cSBarry Smith sum3 -= v3[0] * tmp0; 411589c6957cSBarry Smith } 411689c6957cSBarry Smith x[row] += t[row] = sum1 * ibdiag[0] + sum2 * ibdiag[3] + sum3 * ibdiag[6]; 411789c6957cSBarry Smith x[row + 1] += t[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[4] + sum3 * ibdiag[7]; 411889c6957cSBarry Smith x[row + 2] += t[row + 2] = sum1 * ibdiag[2] + sum2 * ibdiag[5] + sum3 * ibdiag[8]; 41199371c9d4SSatish Balay ibdiag += 9; 41209371c9d4SSatish Balay row += 3; 412189c6957cSBarry Smith break; 412289c6957cSBarry Smith case 4: 412389c6957cSBarry Smith v2 = a->a + ii[row + 1]; 412489c6957cSBarry Smith v3 = a->a + ii[row + 2]; 412589c6957cSBarry Smith v4 = a->a + ii[row + 3]; 412689c6957cSBarry Smith sum1 = t[row]; 412789c6957cSBarry Smith sum2 = t[row + 1]; 412889c6957cSBarry Smith sum3 = t[row + 2]; 412989c6957cSBarry Smith sum4 = t[row + 3]; 413089c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 413189c6957cSBarry Smith i1 = idx[0]; 413289c6957cSBarry Smith i2 = idx[1]; 413389c6957cSBarry Smith idx += 2; 413489c6957cSBarry Smith tmp0 = t[i1]; 413589c6957cSBarry Smith tmp1 = t[i2]; 41369371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 41379371c9d4SSatish Balay v1 += 2; 41389371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 41399371c9d4SSatish Balay v2 += 2; 41409371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 41419371c9d4SSatish Balay v3 += 2; 41429371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 41439371c9d4SSatish Balay v4 += 2; 414489c6957cSBarry Smith } 414589c6957cSBarry Smith 414689c6957cSBarry Smith if (n == sz - 1) { 414789c6957cSBarry Smith tmp0 = t[*idx]; 414889c6957cSBarry Smith sum1 -= v1[0] * tmp0; 414989c6957cSBarry Smith sum2 -= v2[0] * tmp0; 415089c6957cSBarry Smith sum3 -= v3[0] * tmp0; 415189c6957cSBarry Smith sum4 -= v4[0] * tmp0; 415289c6957cSBarry Smith } 415389c6957cSBarry Smith x[row] += t[row] = sum1 * ibdiag[0] + sum2 * ibdiag[4] + sum3 * ibdiag[8] + sum4 * ibdiag[12]; 415489c6957cSBarry Smith x[row + 1] += t[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[5] + sum3 * ibdiag[9] + sum4 * ibdiag[13]; 415589c6957cSBarry Smith x[row + 2] += t[row + 2] = sum1 * ibdiag[2] + sum2 * ibdiag[6] + sum3 * ibdiag[10] + sum4 * ibdiag[14]; 415689c6957cSBarry Smith x[row + 3] += t[row + 3] = sum1 * ibdiag[3] + sum2 * ibdiag[7] + sum3 * ibdiag[11] + sum4 * ibdiag[15]; 41579371c9d4SSatish Balay ibdiag += 16; 41589371c9d4SSatish Balay row += 4; 415989c6957cSBarry Smith break; 416089c6957cSBarry Smith case 5: 416189c6957cSBarry Smith v2 = a->a + ii[row + 1]; 416289c6957cSBarry Smith v3 = a->a + ii[row + 2]; 416389c6957cSBarry Smith v4 = a->a + ii[row + 3]; 416489c6957cSBarry Smith v5 = a->a + ii[row + 4]; 416589c6957cSBarry Smith sum1 = t[row]; 416689c6957cSBarry Smith sum2 = t[row + 1]; 416789c6957cSBarry Smith sum3 = t[row + 2]; 416889c6957cSBarry Smith sum4 = t[row + 3]; 416989c6957cSBarry Smith sum5 = t[row + 4]; 417089c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 417189c6957cSBarry Smith i1 = idx[0]; 417289c6957cSBarry Smith i2 = idx[1]; 417389c6957cSBarry Smith idx += 2; 417489c6957cSBarry Smith tmp0 = t[i1]; 417589c6957cSBarry Smith tmp1 = t[i2]; 41769371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 41779371c9d4SSatish Balay v1 += 2; 41789371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 41799371c9d4SSatish Balay v2 += 2; 41809371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 41819371c9d4SSatish Balay v3 += 2; 41829371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 41839371c9d4SSatish Balay v4 += 2; 41849371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 41859371c9d4SSatish Balay v5 += 2; 418689c6957cSBarry Smith } 418789c6957cSBarry Smith 418889c6957cSBarry Smith if (n == sz - 1) { 418989c6957cSBarry Smith tmp0 = t[*idx]; 419089c6957cSBarry Smith sum1 -= v1[0] * tmp0; 419189c6957cSBarry Smith sum2 -= v2[0] * tmp0; 419289c6957cSBarry Smith sum3 -= v3[0] * tmp0; 419389c6957cSBarry Smith sum4 -= v4[0] * tmp0; 419489c6957cSBarry Smith sum5 -= v5[0] * tmp0; 419589c6957cSBarry Smith } 419689c6957cSBarry Smith x[row] += t[row] = sum1 * ibdiag[0] + sum2 * ibdiag[5] + sum3 * ibdiag[10] + sum4 * ibdiag[15] + sum5 * ibdiag[20]; 419789c6957cSBarry Smith x[row + 1] += t[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[6] + sum3 * ibdiag[11] + sum4 * ibdiag[16] + sum5 * ibdiag[21]; 419889c6957cSBarry Smith x[row + 2] += t[row + 2] = sum1 * ibdiag[2] + sum2 * ibdiag[7] + sum3 * ibdiag[12] + sum4 * ibdiag[17] + sum5 * ibdiag[22]; 419989c6957cSBarry Smith x[row + 3] += t[row + 3] = sum1 * ibdiag[3] + sum2 * ibdiag[8] + sum3 * ibdiag[13] + sum4 * ibdiag[18] + sum5 * ibdiag[23]; 420089c6957cSBarry Smith x[row + 4] += t[row + 4] = sum1 * ibdiag[4] + sum2 * ibdiag[9] + sum3 * ibdiag[14] + sum4 * ibdiag[19] + sum5 * ibdiag[24]; 42019371c9d4SSatish Balay ibdiag += 25; 42029371c9d4SSatish Balay row += 5; 420389c6957cSBarry Smith break; 4204d71ae5a4SJacob Faibussowitsch default: 42054d12350bSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not supported, node row %" PetscInt_FMT " size %" PetscInt_FMT, row, nodesz); 420689c6957cSBarry Smith } 420789c6957cSBarry Smith } 42089566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(a->nz)); 42095850ef23SBarry Smith } 42109566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(xx, &x)); 42119566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(bb, &b)); 42123ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 42132af78befSBarry Smith } 42142af78befSBarry Smith 4215ff6a9541SJacob Faibussowitsch static PetscErrorCode MatMultDiagonalBlock_SeqAIJ_Inode(Mat A, Vec bb, Vec xx) 4216d71ae5a4SJacob Faibussowitsch { 421789c6957cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 421889c6957cSBarry Smith PetscScalar *x, tmp1, tmp2, tmp3, tmp4, tmp5, x1, x2, x3, x4, x5; 421989c6957cSBarry Smith const MatScalar *bdiag = a->inode.bdiag; 422089c6957cSBarry Smith const PetscScalar *b; 42214d12350bSJunchao Zhang PetscInt m = a->inode.node_count, cnt = 0, i, row, nodesz; 42224d12350bSJunchao Zhang const PetscInt *sizes = a->inode.size_csr; 42232af78befSBarry Smith 422489c6957cSBarry Smith PetscFunctionBegin; 42254d12350bSJunchao Zhang PetscCheck(a->inode.size_csr, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 42269566063dSJacob Faibussowitsch PetscCall(VecGetArray(xx, &x)); 42279566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(bb, &b)); 422889c6957cSBarry Smith cnt = 0; 422989c6957cSBarry Smith for (i = 0, row = 0; i < m; i++) { 42304d12350bSJunchao Zhang nodesz = sizes[i + 1] - sizes[i]; 42314d12350bSJunchao Zhang switch (nodesz) { 423289c6957cSBarry Smith case 1: 42339371c9d4SSatish Balay x[row] = b[row] * bdiag[cnt++]; 42349371c9d4SSatish Balay row++; 423589c6957cSBarry Smith break; 423689c6957cSBarry Smith case 2: 42379371c9d4SSatish Balay x1 = b[row]; 42389371c9d4SSatish Balay x2 = b[row + 1]; 423989c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 2]; 424089c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 3]; 424189c6957cSBarry Smith x[row++] = tmp1; 424289c6957cSBarry Smith x[row++] = tmp2; 424389c6957cSBarry Smith cnt += 4; 424489c6957cSBarry Smith break; 424589c6957cSBarry Smith case 3: 42469371c9d4SSatish Balay x1 = b[row]; 42479371c9d4SSatish Balay x2 = b[row + 1]; 42489371c9d4SSatish Balay x3 = b[row + 2]; 424989c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 3] + x3 * bdiag[cnt + 6]; 425089c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 4] + x3 * bdiag[cnt + 7]; 425189c6957cSBarry Smith tmp3 = x1 * bdiag[cnt + 2] + x2 * bdiag[cnt + 5] + x3 * bdiag[cnt + 8]; 425289c6957cSBarry Smith x[row++] = tmp1; 425389c6957cSBarry Smith x[row++] = tmp2; 425489c6957cSBarry Smith x[row++] = tmp3; 425589c6957cSBarry Smith cnt += 9; 425689c6957cSBarry Smith break; 425789c6957cSBarry Smith case 4: 42589371c9d4SSatish Balay x1 = b[row]; 42599371c9d4SSatish Balay x2 = b[row + 1]; 42609371c9d4SSatish Balay x3 = b[row + 2]; 42619371c9d4SSatish Balay x4 = b[row + 3]; 426289c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 4] + x3 * bdiag[cnt + 8] + x4 * bdiag[cnt + 12]; 426389c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 5] + x3 * bdiag[cnt + 9] + x4 * bdiag[cnt + 13]; 426489c6957cSBarry Smith tmp3 = x1 * bdiag[cnt + 2] + x2 * bdiag[cnt + 6] + x3 * bdiag[cnt + 10] + x4 * bdiag[cnt + 14]; 426589c6957cSBarry Smith tmp4 = x1 * bdiag[cnt + 3] + x2 * bdiag[cnt + 7] + x3 * bdiag[cnt + 11] + x4 * bdiag[cnt + 15]; 426689c6957cSBarry Smith x[row++] = tmp1; 426789c6957cSBarry Smith x[row++] = tmp2; 426889c6957cSBarry Smith x[row++] = tmp3; 426989c6957cSBarry Smith x[row++] = tmp4; 427089c6957cSBarry Smith cnt += 16; 427189c6957cSBarry Smith break; 427289c6957cSBarry Smith case 5: 42739371c9d4SSatish Balay x1 = b[row]; 42749371c9d4SSatish Balay x2 = b[row + 1]; 42759371c9d4SSatish Balay x3 = b[row + 2]; 42769371c9d4SSatish Balay x4 = b[row + 3]; 42779371c9d4SSatish Balay x5 = b[row + 4]; 427889c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 5] + x3 * bdiag[cnt + 10] + x4 * bdiag[cnt + 15] + x5 * bdiag[cnt + 20]; 427989c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 6] + x3 * bdiag[cnt + 11] + x4 * bdiag[cnt + 16] + x5 * bdiag[cnt + 21]; 428089c6957cSBarry Smith tmp3 = x1 * bdiag[cnt + 2] + x2 * bdiag[cnt + 7] + x3 * bdiag[cnt + 12] + x4 * bdiag[cnt + 17] + x5 * bdiag[cnt + 22]; 428189c6957cSBarry Smith tmp4 = x1 * bdiag[cnt + 3] + x2 * bdiag[cnt + 8] + x3 * bdiag[cnt + 13] + x4 * bdiag[cnt + 18] + x5 * bdiag[cnt + 23]; 428289c6957cSBarry Smith tmp5 = x1 * bdiag[cnt + 4] + x2 * bdiag[cnt + 9] + x3 * bdiag[cnt + 14] + x4 * bdiag[cnt + 19] + x5 * bdiag[cnt + 24]; 428389c6957cSBarry Smith x[row++] = tmp1; 428489c6957cSBarry Smith x[row++] = tmp2; 428589c6957cSBarry Smith x[row++] = tmp3; 428689c6957cSBarry Smith x[row++] = tmp4; 428789c6957cSBarry Smith x[row++] = tmp5; 428889c6957cSBarry Smith cnt += 25; 428989c6957cSBarry Smith break; 4290d71ae5a4SJacob Faibussowitsch default: 42914d12350bSJunchao Zhang SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not supported, node row %" PetscInt_FMT " size %" PetscInt_FMT, row, nodesz); 429289c6957cSBarry Smith } 429389c6957cSBarry Smith } 42949566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * cnt)); 42959566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(xx, &x)); 42969566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(bb, &b)); 42973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 429889c6957cSBarry Smith } 429989c6957cSBarry Smith 4300d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJ_Inode_ResetOps(Mat A) 4301d71ae5a4SJacob Faibussowitsch { 4302b215bc84SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 4303b215bc84SStefano Zampini 4304b215bc84SStefano Zampini PetscFunctionBegin; 4305b215bc84SStefano Zampini a->inode.node_count = 0; 4306b215bc84SStefano Zampini a->inode.use = PETSC_FALSE; 4307b215bc84SStefano Zampini a->inode.checked = PETSC_FALSE; 4308b215bc84SStefano Zampini a->inode.mat_nonzerostate = -1; 4309b215bc84SStefano Zampini A->ops->getrowij = MatGetRowIJ_SeqAIJ; 4310b215bc84SStefano Zampini A->ops->restorerowij = MatRestoreRowIJ_SeqAIJ; 4311b215bc84SStefano Zampini A->ops->getcolumnij = MatGetColumnIJ_SeqAIJ; 4312b215bc84SStefano Zampini A->ops->restorecolumnij = MatRestoreColumnIJ_SeqAIJ; 4313b215bc84SStefano Zampini A->ops->coloringpatch = NULL; 4314b215bc84SStefano Zampini A->ops->multdiagonalblock = NULL; 4315ad540459SPierre Jolivet if (A->factortype) A->ops->solve = MatSolve_SeqAIJ_inplace; 43163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4317b215bc84SStefano Zampini } 4318b215bc84SStefano Zampini 43194c1414c8SBarry Smith /* 43204c1414c8SBarry Smith samestructure indicates that the matrix has not changed its nonzero structure so we 43214c1414c8SBarry Smith do not need to recompute the inodes 43224c1414c8SBarry Smith */ 4323d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCheckInode(Mat A) 4324d71ae5a4SJacob Faibussowitsch { 43254c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 43268758e1faSBarry Smith PetscInt i, j, m, nzx, nzy, *ns, node_count, blk_size; 4327ace3abfcSBarry Smith PetscBool flag; 43288758e1faSBarry Smith const PetscInt *idx, *idy, *ii; 43294c1414c8SBarry Smith 43304c1414c8SBarry Smith PetscFunctionBegin; 4331b215bc84SStefano Zampini if (!a->inode.use) { 43329566063dSJacob Faibussowitsch PetscCall(MatSeqAIJ_Inode_ResetOps(A)); 43334d12350bSJunchao Zhang PetscCall(PetscFree(a->inode.size_csr)); 43343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4335b215bc84SStefano Zampini } 43363ba16761SJacob Faibussowitsch if (a->inode.checked && A->nonzerostate == a->inode.mat_nonzerostate) PetscFunctionReturn(PETSC_SUCCESS); 43374c1414c8SBarry Smith 4338d0f46423SBarry Smith m = A->rmap->n; 43394d12350bSJunchao Zhang if (!a->inode.size_csr) PetscCall(PetscMalloc1(m + 1, &a->inode.size_csr)); 43404d12350bSJunchao Zhang ns = a->inode.size_csr; 43414d12350bSJunchao Zhang ns[0] = 0; 43424c1414c8SBarry Smith 43434c1414c8SBarry Smith i = 0; 43444c1414c8SBarry Smith node_count = 0; 43454c1414c8SBarry Smith idx = a->j; 43464c1414c8SBarry Smith ii = a->i; 43476f2c871aSStefano Zampini if (idx) { 43484c1414c8SBarry Smith while (i < m) { /* For each row */ 43494c1414c8SBarry Smith nzx = ii[i + 1] - ii[i]; /* Number of nonzeros */ 43504c1414c8SBarry Smith /* Limits the number of elements in a node to 'a->inode.limit' */ 43514c1414c8SBarry Smith for (j = i + 1, idy = idx, blk_size = 1; j < m && blk_size < a->inode.limit; ++j, ++blk_size) { 43524c1414c8SBarry Smith nzy = ii[j + 1] - ii[j]; /* Same number of nonzeros */ 43534c1414c8SBarry Smith if (nzy != nzx) break; 43544c1414c8SBarry Smith idy += nzx; /* Same nonzero pattern */ 43559566063dSJacob Faibussowitsch PetscCall(PetscArraycmp(idx, idy, nzx, &flag)); 43564c1414c8SBarry Smith if (!flag) break; 43574c1414c8SBarry Smith } 43584d12350bSJunchao Zhang ns[node_count + 1] = ns[node_count] + blk_size; 43594d12350bSJunchao Zhang node_count++; 43604c1414c8SBarry Smith idx += blk_size * nzx; 43614c1414c8SBarry Smith i = j; 43624c1414c8SBarry Smith } 43636f2c871aSStefano Zampini } 43644c1414c8SBarry Smith /* If not enough inodes found,, do not use inode version of the routines */ 43656f2c871aSStefano Zampini if (!m || !idx || node_count > .8 * m) { 43669566063dSJacob Faibussowitsch PetscCall(MatSeqAIJ_Inode_ResetOps(A)); 43674d12350bSJunchao Zhang PetscCall(PetscFree(a->inode.size_csr)); 43689566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Found %" PetscInt_FMT " nodes out of %" PetscInt_FMT " rows. Not using Inode routines\n", node_count, m)); 43694c1414c8SBarry Smith } else { 4370d5f3da31SBarry Smith if (!A->factortype) { 4371375a6242SBarry Smith A->ops->multdiagonalblock = MatMultDiagonalBlock_SeqAIJ_Inode; 4372375a6242SBarry Smith if (A->rmap->n == A->cmap->n) { 43734108e4d5SBarry Smith A->ops->getrowij = MatGetRowIJ_SeqAIJ_Inode; 43744108e4d5SBarry Smith A->ops->restorerowij = MatRestoreRowIJ_SeqAIJ_Inode; 43754108e4d5SBarry Smith A->ops->getcolumnij = MatGetColumnIJ_SeqAIJ_Inode; 43764108e4d5SBarry Smith A->ops->restorecolumnij = MatRestoreColumnIJ_SeqAIJ_Inode; 43774108e4d5SBarry Smith A->ops->coloringpatch = MatColoringPatch_SeqAIJ_Inode; 4378375a6242SBarry Smith } 4379d3ac4fa3SBarry Smith } else { 4380d3ac4fa3SBarry Smith A->ops->solve = MatSolve_SeqAIJ_Inode_inplace; 4381d3ac4fa3SBarry Smith } 43824c1414c8SBarry Smith a->inode.node_count = node_count; 43839566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Found %" PetscInt_FMT " nodes of %" PetscInt_FMT ". Limit used: %" PetscInt_FMT ". Using Inode routines\n", node_count, m, a->inode.limit)); 43844c1414c8SBarry Smith } 4385be6adb11SBarry Smith a->inode.checked = PETSC_TRUE; 4386a02bda8eSBarry Smith a->inode.mat_nonzerostate = A->nonzerostate; 43873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 43884c1414c8SBarry Smith } 43894c1414c8SBarry Smith 4390d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDuplicate_SeqAIJ_Inode(Mat A, MatDuplicateOption cpvalues, Mat *C) 4391d71ae5a4SJacob Faibussowitsch { 4392150f0143SBarry Smith Mat B = *C; 4393150f0143SBarry Smith Mat_SeqAIJ *c = (Mat_SeqAIJ *)B->data, *a = (Mat_SeqAIJ *)A->data; 4394150f0143SBarry Smith PetscInt m = A->rmap->n; 4395150f0143SBarry Smith 4396150f0143SBarry Smith PetscFunctionBegin; 4397150f0143SBarry Smith c->inode.use = a->inode.use; 4398150f0143SBarry Smith c->inode.limit = a->inode.limit; 4399150f0143SBarry Smith c->inode.max_limit = a->inode.max_limit; 4400ec710b6aSStefano Zampini c->inode.checked = PETSC_FALSE; 44014d12350bSJunchao Zhang c->inode.size_csr = NULL; 4402ec710b6aSStefano Zampini c->inode.node_count = 0; 4403ec710b6aSStefano Zampini c->inode.ibdiagvalid = PETSC_FALSE; 4404ec710b6aSStefano Zampini c->inode.ibdiag = NULL; 4405ec710b6aSStefano Zampini c->inode.bdiag = NULL; 4406ec710b6aSStefano Zampini c->inode.mat_nonzerostate = -1; 4407b215bc84SStefano Zampini if (a->inode.use) { 44084d12350bSJunchao Zhang if (a->inode.checked && a->inode.size_csr) { 44094d12350bSJunchao Zhang PetscCall(PetscMalloc1(m + 1, &c->inode.size_csr)); 44104d12350bSJunchao Zhang PetscCall(PetscArraycpy(c->inode.size_csr, a->inode.size_csr, m + 1)); 4411ec710b6aSStefano Zampini 4412ec710b6aSStefano Zampini c->inode.checked = PETSC_TRUE; 4413ec710b6aSStefano Zampini c->inode.node_count = a->inode.node_count; 4414ec710b6aSStefano Zampini c->inode.mat_nonzerostate = (*C)->nonzerostate; 4415ec710b6aSStefano Zampini } 4416a02bda8eSBarry Smith /* note the table of functions below should match that in MatSeqAIJCheckInode() */ 44172c451681SBarry Smith if (!B->factortype) { 44182c451681SBarry Smith B->ops->getrowij = MatGetRowIJ_SeqAIJ_Inode; 44192c451681SBarry Smith B->ops->restorerowij = MatRestoreRowIJ_SeqAIJ_Inode; 44202c451681SBarry Smith B->ops->getcolumnij = MatGetColumnIJ_SeqAIJ_Inode; 44212c451681SBarry Smith B->ops->restorecolumnij = MatRestoreColumnIJ_SeqAIJ_Inode; 44222c451681SBarry Smith B->ops->coloringpatch = MatColoringPatch_SeqAIJ_Inode; 44232c451681SBarry Smith B->ops->multdiagonalblock = MatMultDiagonalBlock_SeqAIJ_Inode; 4424150f0143SBarry Smith } else { 44252c451681SBarry Smith B->ops->solve = MatSolve_SeqAIJ_Inode_inplace; 4426150f0143SBarry Smith } 4427150f0143SBarry Smith } 44283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4429150f0143SBarry Smith } 4430150f0143SBarry Smith 4431d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode MatGetRow_FactoredLU(PetscInt *cols, PetscInt nzl, PetscInt nzu, PetscInt nz, const PetscInt *ai, const PetscInt *aj, const PetscInt *adiag, PetscInt row) 4432d71ae5a4SJacob Faibussowitsch { 44338758e1faSBarry Smith PetscInt k; 44348758e1faSBarry Smith const PetscInt *vi; 44356e111a19SKarl Rupp 443617454e89SShri Abhyankar PetscFunctionBegin; 443717454e89SShri Abhyankar vi = aj + ai[row]; 443817454e89SShri Abhyankar for (k = 0; k < nzl; k++) cols[k] = vi[k]; 443917454e89SShri Abhyankar vi = aj + adiag[row]; 444017454e89SShri Abhyankar cols[nzl] = vi[0]; 444117454e89SShri Abhyankar vi = aj + adiag[row + 1] + 1; 444217454e89SShri Abhyankar for (k = 0; k < nzu; k++) cols[nzl + 1 + k] = vi[k]; 44433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 444417454e89SShri Abhyankar } 44456936b636SHong Zhang /* 4446a02bda8eSBarry Smith MatSeqAIJCheckInode_FactorLU - Check Inode for factored seqaij matrix. 4447a02bda8eSBarry Smith Modified from MatSeqAIJCheckInode(). 44486936b636SHong Zhang 44496936b636SHong Zhang Input Parameters: 4450abb87a52SBarry Smith . Mat A - ILU or LU matrix factor 4451abb87a52SBarry Smith 44526936b636SHong Zhang */ 4453d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCheckInode_FactorLU(Mat A) 4454d71ae5a4SJacob Faibussowitsch { 4455019b515eSShri Abhyankar Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 4456019b515eSShri Abhyankar PetscInt i, j, m, nzl1, nzu1, nzl2, nzu2, nzx, nzy, node_count, blk_size; 44578758e1faSBarry Smith PetscInt *cols1, *cols2, *ns; 44588758e1faSBarry Smith const PetscInt *ai = a->i, *aj = a->j, *adiag = a->diag; 4459ace3abfcSBarry Smith PetscBool flag; 4460019b515eSShri Abhyankar 4461019b515eSShri Abhyankar PetscFunctionBegin; 44623ba16761SJacob Faibussowitsch if (!a->inode.use) PetscFunctionReturn(PETSC_SUCCESS); 44633ba16761SJacob Faibussowitsch if (a->inode.checked) PetscFunctionReturn(PETSC_SUCCESS); 4464019b515eSShri Abhyankar 4465019b515eSShri Abhyankar m = A->rmap->n; 44664d12350bSJunchao Zhang if (a->inode.size_csr) ns = a->inode.size_csr; 446748a46eb9SPierre Jolivet else PetscCall(PetscMalloc1(m + 1, &ns)); 44684d12350bSJunchao Zhang ns[0] = 0; 4469019b515eSShri Abhyankar 4470019b515eSShri Abhyankar i = 0; 4471019b515eSShri Abhyankar node_count = 0; 44729566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &cols1, m, &cols2)); 4473019b515eSShri Abhyankar while (i < m) { /* For each row */ 4474019b515eSShri Abhyankar nzl1 = ai[i + 1] - ai[i]; /* Number of nonzeros in L */ 4475019b515eSShri Abhyankar nzu1 = adiag[i] - adiag[i + 1] - 1; /* Number of nonzeros in U excluding diagonal*/ 4476019b515eSShri Abhyankar nzx = nzl1 + nzu1 + 1; 44773ba16761SJacob Faibussowitsch PetscCall(MatGetRow_FactoredLU(cols1, nzl1, nzu1, nzx, ai, aj, adiag, i)); 4478019b515eSShri Abhyankar 4479019b515eSShri Abhyankar /* Limits the number of elements in a node to 'a->inode.limit' */ 4480019b515eSShri Abhyankar for (j = i + 1, blk_size = 1; j < m && blk_size < a->inode.limit; ++j, ++blk_size) { 4481019b515eSShri Abhyankar nzl2 = ai[j + 1] - ai[j]; 4482019b515eSShri Abhyankar nzu2 = adiag[j] - adiag[j + 1] - 1; 4483019b515eSShri Abhyankar nzy = nzl2 + nzu2 + 1; 4484019b515eSShri Abhyankar if (nzy != nzx) break; 44859566063dSJacob Faibussowitsch PetscCall(MatGetRow_FactoredLU(cols2, nzl2, nzu2, nzy, ai, aj, adiag, j)); 44869566063dSJacob Faibussowitsch PetscCall(PetscArraycmp(cols1, cols2, nzx, &flag)); 44878758e1faSBarry Smith if (!flag) break; 4488019b515eSShri Abhyankar } 44894d12350bSJunchao Zhang ns[node_count + 1] = ns[node_count] + blk_size; 44904d12350bSJunchao Zhang node_count++; 4491019b515eSShri Abhyankar i = j; 4492019b515eSShri Abhyankar } 44939566063dSJacob Faibussowitsch PetscCall(PetscFree2(cols1, cols2)); 4494019b515eSShri Abhyankar /* If not enough inodes found,, do not use inode version of the routines */ 4495be6adb11SBarry Smith if (!m || node_count > .8 * m) { 44969566063dSJacob Faibussowitsch PetscCall(PetscFree(ns)); 44972205254eSKarl Rupp 4498019b515eSShri Abhyankar a->inode.node_count = 0; 44994d12350bSJunchao Zhang a->inode.size_csr = NULL; 4500019b515eSShri Abhyankar a->inode.use = PETSC_FALSE; 45012205254eSKarl Rupp 45029566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Found %" PetscInt_FMT " nodes out of %" PetscInt_FMT " rows. Not using Inode routines\n", node_count, m)); 4503019b515eSShri Abhyankar } else { 4504f4259b30SLisandro Dalcin A->ops->mult = NULL; 4505f4259b30SLisandro Dalcin A->ops->sor = NULL; 4506f4259b30SLisandro Dalcin A->ops->multadd = NULL; 4507f4259b30SLisandro Dalcin A->ops->getrowij = NULL; 4508f4259b30SLisandro Dalcin A->ops->restorerowij = NULL; 4509f4259b30SLisandro Dalcin A->ops->getcolumnij = NULL; 4510f4259b30SLisandro Dalcin A->ops->restorecolumnij = NULL; 4511f4259b30SLisandro Dalcin A->ops->coloringpatch = NULL; 4512f4259b30SLisandro Dalcin A->ops->multdiagonalblock = NULL; 4513019b515eSShri Abhyankar a->inode.node_count = node_count; 45144d12350bSJunchao Zhang a->inode.size_csr = ns; 45159566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Found %" PetscInt_FMT " nodes of %" PetscInt_FMT ". Limit used: %" PetscInt_FMT ". Using Inode routines\n", node_count, m, a->inode.limit)); 4516019b515eSShri Abhyankar } 4517be6adb11SBarry Smith a->inode.checked = PETSC_TRUE; 45183ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4519019b515eSShri Abhyankar } 4520019b515eSShri Abhyankar 4521d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJInvalidateDiagonal_Inode(Mat A) 4522d71ae5a4SJacob Faibussowitsch { 4523acf2f550SJed Brown Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 4524acf2f550SJed Brown 4525acf2f550SJed Brown PetscFunctionBegin; 4526acf2f550SJed Brown a->inode.ibdiagvalid = PETSC_FALSE; 45273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4528acf2f550SJed Brown } 4529acf2f550SJed Brown 45304c1414c8SBarry Smith /* 45314c1414c8SBarry Smith This is really ugly. if inodes are used this replaces the 45324c1414c8SBarry Smith permutations with ones that correspond to rows/cols of the matrix 4533467446fbSPierre Jolivet rather than inode blocks 45344c1414c8SBarry Smith */ 4535d71ae5a4SJacob Faibussowitsch PetscErrorCode MatInodeAdjustForInodes(Mat A, IS *rperm, IS *cperm) 4536d71ae5a4SJacob Faibussowitsch { 45374c1414c8SBarry Smith PetscFunctionBegin; 4538cac4c232SBarry Smith PetscTryMethod(A, "MatInodeAdjustForInodes_C", (Mat, IS *, IS *), (A, rperm, cperm)); 45393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 45404c1414c8SBarry Smith } 45414c1414c8SBarry Smith 4542d71ae5a4SJacob Faibussowitsch PetscErrorCode MatInodeAdjustForInodes_SeqAIJ_Inode(Mat A, IS *rperm, IS *cperm) 4543d71ae5a4SJacob Faibussowitsch { 45444c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 45455d0c19d7SBarry Smith PetscInt m = A->rmap->n, n = A->cmap->n, i, j, nslim_row = a->inode.node_count; 45465d0c19d7SBarry Smith const PetscInt *ridx, *cidx; 45474d12350bSJunchao Zhang PetscInt row, col, *permr, *permc, *ns_row = a->inode.size_csr, *tns, start_val, end_val, indx; 45484c1414c8SBarry Smith PetscInt nslim_col, *ns_col; 45494c1414c8SBarry Smith IS ris = *rperm, cis = *cperm; 45504c1414c8SBarry Smith 45514c1414c8SBarry Smith PetscFunctionBegin; 45524d12350bSJunchao Zhang if (!a->inode.size_csr) PetscFunctionReturn(PETSC_SUCCESS); /* no inodes so return */ 45533ba16761SJacob Faibussowitsch if (a->inode.node_count == m) PetscFunctionReturn(PETSC_SUCCESS); /* all inodes are of size 1 */ 45544c1414c8SBarry Smith 45559566063dSJacob Faibussowitsch PetscCall(MatCreateColInode_Private(A, &nslim_col, &ns_col)); 455632603206SJames Wright PetscCall(PetscMalloc1(((nslim_row > nslim_col ? nslim_row : nslim_col) + 1), &tns)); 45579566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &permr, n, &permc)); 45584c1414c8SBarry Smith 45599566063dSJacob Faibussowitsch PetscCall(ISGetIndices(ris, &ridx)); 45609566063dSJacob Faibussowitsch PetscCall(ISGetIndices(cis, &cidx)); 45614c1414c8SBarry Smith 4562baca6076SPierre Jolivet /* Form the inode structure for the rows of permuted matrix using inv perm*/ 45634d12350bSJunchao Zhang for (i = 0, tns[0] = 0; i < nslim_row; ++i) tns[i + 1] = tns[i] + (ns_row[i + 1] - ns_row[i]); 45644c1414c8SBarry Smith 45654c1414c8SBarry Smith /* Construct the permutations for rows*/ 45664c1414c8SBarry Smith for (i = 0, row = 0; i < nslim_row; ++i) { 45674c1414c8SBarry Smith indx = ridx[i]; 45684c1414c8SBarry Smith start_val = tns[indx]; 45694c1414c8SBarry Smith end_val = tns[indx + 1]; 45704c1414c8SBarry Smith for (j = start_val; j < end_val; ++j, ++row) permr[row] = j; 45714c1414c8SBarry Smith } 45724c1414c8SBarry Smith 45734c1414c8SBarry Smith /* Form the inode structure for the columns of permuted matrix using inv perm*/ 45744d12350bSJunchao Zhang for (i = 0, tns[0] = 0; i < nslim_col; ++i) tns[i + 1] = tns[i] + (ns_col[i + 1] - ns_col[i]); 45754c1414c8SBarry Smith 45764c1414c8SBarry Smith /* Construct permutations for columns */ 45774c1414c8SBarry Smith for (i = 0, col = 0; i < nslim_col; ++i) { 45784c1414c8SBarry Smith indx = cidx[i]; 45794c1414c8SBarry Smith start_val = tns[indx]; 45804c1414c8SBarry Smith end_val = tns[indx + 1]; 45814c1414c8SBarry Smith for (j = start_val; j < end_val; ++j, ++col) permc[col] = j; 45824c1414c8SBarry Smith } 45834c1414c8SBarry Smith 45849566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, n, permr, PETSC_COPY_VALUES, rperm)); 45859566063dSJacob Faibussowitsch PetscCall(ISSetPermutation(*rperm)); 45869566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, n, permc, PETSC_COPY_VALUES, cperm)); 45879566063dSJacob Faibussowitsch PetscCall(ISSetPermutation(*cperm)); 45884c1414c8SBarry Smith 45899566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(ris, &ridx)); 45909566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(cis, &cidx)); 45914c1414c8SBarry Smith 45929566063dSJacob Faibussowitsch PetscCall(PetscFree(ns_col)); 45939566063dSJacob Faibussowitsch PetscCall(PetscFree2(permr, permc)); 45949566063dSJacob Faibussowitsch PetscCall(ISDestroy(&cis)); 45959566063dSJacob Faibussowitsch PetscCall(ISDestroy(&ris)); 45969566063dSJacob Faibussowitsch PetscCall(PetscFree(tns)); 45973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 45984c1414c8SBarry Smith } 45994c1414c8SBarry Smith 46004c1414c8SBarry Smith /*@C 460111a5261eSBarry Smith MatInodeGetInodeSizes - Returns the inode information of a matrix with inodes 46024c1414c8SBarry Smith 46033f9fe445SBarry Smith Not Collective 46044c1414c8SBarry Smith 46054c1414c8SBarry Smith Input Parameter: 460611a5261eSBarry Smith . A - the Inode matrix or matrix derived from the Inode class -- e.g., `MATSEQAIJ` 46074c1414c8SBarry Smith 4608d8d19677SJose E. Roman Output Parameters: 46094c1414c8SBarry Smith + node_count - no of inodes present in the matrix. 46102ef1f0ffSBarry Smith . sizes - an array of size `node_count`, with the sizes of each inode. 46114c1414c8SBarry Smith - limit - the max size used to generate the inodes. 46124c1414c8SBarry Smith 46134c1414c8SBarry Smith Level: advanced 46144c1414c8SBarry Smith 461511a5261eSBarry Smith Note: 46164c1414c8SBarry Smith It should be called after the matrix is assembled. 46174c1414c8SBarry Smith The contents of the sizes[] array should not be changed. 46182ef1f0ffSBarry Smith `NULL` may be passed for information not needed 46194c1414c8SBarry Smith 46201cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatGetInfo()` 46214c1414c8SBarry Smith @*/ 4622d71ae5a4SJacob Faibussowitsch PetscErrorCode MatInodeGetInodeSizes(Mat A, PetscInt *node_count, PetscInt *sizes[], PetscInt *limit) 4623d71ae5a4SJacob Faibussowitsch { 46245f80ce2aSJacob Faibussowitsch PetscErrorCode (*f)(Mat, PetscInt *, PetscInt **, PetscInt *); 46254c1414c8SBarry Smith 46264c1414c8SBarry Smith PetscFunctionBegin; 46275f80ce2aSJacob Faibussowitsch PetscCheck(A->assembled, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix"); 46289566063dSJacob Faibussowitsch PetscCall(PetscObjectQueryFunction((PetscObject)A, "MatInodeGetInodeSizes_C", &f)); 46299566063dSJacob Faibussowitsch if (f) PetscCall((*f)(A, node_count, sizes, limit)); 46303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 46314c1414c8SBarry Smith } 46324c1414c8SBarry Smith 4633d71ae5a4SJacob Faibussowitsch PetscErrorCode MatInodeGetInodeSizes_SeqAIJ_Inode(Mat A, PetscInt *node_count, PetscInt *sizes[], PetscInt *limit) 4634d71ae5a4SJacob Faibussowitsch { 46354c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 46364c1414c8SBarry Smith 46374c1414c8SBarry Smith PetscFunctionBegin; 46384c1414c8SBarry Smith if (node_count) *node_count = a->inode.node_count; 46394d12350bSJunchao Zhang if (sizes) *sizes = a->inode.size_csr; 46404c1414c8SBarry Smith if (limit) *limit = a->inode.limit; 46413ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 46424c1414c8SBarry Smith } 4643