14c1414c8SBarry Smith 24c1414c8SBarry Smith /* 34c1414c8SBarry Smith This file provides high performance routines for the Inode format (compressed sparse row) 44c1414c8SBarry Smith by taking advantage of rows with identical nonzero structure (I-nodes). 54c1414c8SBarry Smith */ 6c6db04a5SJed Brown #include <../src/mat/impls/aij/seq/aij.h> 74c1414c8SBarry Smith 8d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatCreateColInode_Private(Mat A, PetscInt *size, PetscInt **ns) 9d71ae5a4SJacob Faibussowitsch { 104c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 114c1414c8SBarry Smith PetscInt i, count, m, n, min_mn, *ns_row, *ns_col; 124c1414c8SBarry Smith 134c1414c8SBarry Smith PetscFunctionBegin; 14d0f46423SBarry Smith n = A->cmap->n; 15d0f46423SBarry Smith m = A->rmap->n; 1608401ef6SPierre Jolivet PetscCheck(a->inode.size, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 174c1414c8SBarry Smith ns_row = a->inode.size; 184c1414c8SBarry Smith 194c1414c8SBarry Smith min_mn = (m < n) ? m : n; 204c1414c8SBarry Smith if (!ns) { 219371c9d4SSatish Balay for (count = 0, i = 0; count < min_mn; count += ns_row[i], i++) 229371c9d4SSatish Balay ; 239371c9d4SSatish Balay for (; count + 1 < n; count++, i++) 249371c9d4SSatish Balay ; 25ad540459SPierre Jolivet if (count < n) i++; 264c1414c8SBarry Smith *size = i; 273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 284c1414c8SBarry Smith } 299566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n + 1, &ns_col)); 304c1414c8SBarry Smith 314c1414c8SBarry Smith /* Use the same row structure wherever feasible. */ 32ad540459SPierre Jolivet for (count = 0, i = 0; count < min_mn; count += ns_row[i], i++) ns_col[i] = ns_row[i]; 334c1414c8SBarry Smith 344c1414c8SBarry Smith /* if m < n; pad up the remainder with inode_limit */ 35ad540459SPierre Jolivet for (; count + 1 < n; count++, i++) ns_col[i] = 1; 36*aaa8cc7dSPierre Jolivet /* The last node is the odd ball. pad it up with the remaining rows; */ 374c1414c8SBarry Smith if (count < n) { 384c1414c8SBarry Smith ns_col[i] = n - count; 394c1414c8SBarry Smith i++; 404c1414c8SBarry Smith } else if (count > n) { 414c1414c8SBarry Smith /* Adjust for the over estimation */ 424c1414c8SBarry Smith ns_col[i - 1] += n - count; 434c1414c8SBarry Smith } 444c1414c8SBarry Smith *size = i; 454c1414c8SBarry Smith *ns = ns_col; 463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 474c1414c8SBarry Smith } 484c1414c8SBarry Smith 494c1414c8SBarry Smith /* 504c1414c8SBarry Smith This builds symmetric version of nonzero structure, 514c1414c8SBarry Smith */ 52d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetRowIJ_SeqAIJ_Inode_Symmetric(Mat A, const PetscInt *iia[], const PetscInt *jja[], PetscInt ishift, PetscInt oshift) 53d71ae5a4SJacob Faibussowitsch { 544c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 558758e1faSBarry Smith PetscInt *work, *ia, *ja, nz, nslim_row, nslim_col, m, row, col, n; 568758e1faSBarry Smith PetscInt *tns, *tvc, *ns_row = a->inode.size, *ns_col, nsz, i1, i2; 578758e1faSBarry Smith const PetscInt *j, *jmax, *ai = a->i, *aj = a->j; 584c1414c8SBarry Smith 594c1414c8SBarry Smith PetscFunctionBegin; 604c1414c8SBarry Smith nslim_row = a->inode.node_count; 61d0f46423SBarry Smith m = A->rmap->n; 62d0f46423SBarry Smith n = A->cmap->n; 6308401ef6SPierre Jolivet PetscCheck(m == n, PETSC_COMM_SELF, PETSC_ERR_SUP, "MatGetRowIJ_SeqAIJ_Inode_Symmetric: Matrix should be square"); 6408401ef6SPierre Jolivet PetscCheck(a->inode.size, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 654c1414c8SBarry Smith 664c1414c8SBarry Smith /* Use the row_inode as column_inode */ 674c1414c8SBarry Smith nslim_col = nslim_row; 684c1414c8SBarry Smith ns_col = ns_row; 694c1414c8SBarry Smith 7035cb6cd3SPierre Jolivet /* allocate space for reformatted inode structure */ 719566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(nslim_col + 1, &tns, n + 1, &tvc)); 724c1414c8SBarry Smith for (i1 = 0, tns[0] = 0; i1 < nslim_col; ++i1) tns[i1 + 1] = tns[i1] + ns_row[i1]; 734c1414c8SBarry Smith 744c1414c8SBarry Smith for (i1 = 0, col = 0; i1 < nslim_col; ++i1) { 754c1414c8SBarry Smith nsz = ns_col[i1]; 762205254eSKarl Rupp for (i2 = 0; i2 < nsz; ++i2, ++col) tvc[col] = i1; 774c1414c8SBarry Smith } 784c1414c8SBarry Smith /* allocate space for row pointers */ 799566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nslim_row + 1, &ia)); 804c1414c8SBarry Smith *iia = ia; 819566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nslim_row + 1, &work)); 824c1414c8SBarry Smith 834c1414c8SBarry Smith /* determine the number of columns in each row */ 844c1414c8SBarry Smith ia[0] = oshift; 854c1414c8SBarry Smith for (i1 = 0, row = 0; i1 < nslim_row; row += ns_row[i1], i1++) { 864c1414c8SBarry Smith j = aj + ai[row] + ishift; 874c1414c8SBarry Smith jmax = aj + ai[row + 1] + ishift; 8883fed2edSSatish Balay if (j == jmax) continue; /* empty row */ 894c1414c8SBarry Smith col = *j++ + ishift; 904c1414c8SBarry Smith i2 = tvc[col]; 916aad120cSJose E. Roman while (i2 < i1 && j < jmax) { /* 1.[-xx-d-xx--] 2.[-xx-------],off-diagonal elements */ 924c1414c8SBarry Smith ia[i1 + 1]++; 934c1414c8SBarry Smith ia[i2 + 1]++; 944c1414c8SBarry Smith i2++; /* Start col of next node */ 9590d2dec7SBarry Smith while ((j < jmax) && ((col = *j + ishift) < tns[i2])) ++j; 964c1414c8SBarry Smith i2 = tvc[col]; 974c1414c8SBarry Smith } 984c1414c8SBarry Smith if (i2 == i1) ia[i2 + 1]++; /* now the diagonal element */ 994c1414c8SBarry Smith } 1004c1414c8SBarry Smith 1014c1414c8SBarry Smith /* shift ia[i] to point to next row */ 1024c1414c8SBarry Smith for (i1 = 1; i1 < nslim_row + 1; i1++) { 1034c1414c8SBarry Smith row = ia[i1 - 1]; 1044c1414c8SBarry Smith ia[i1] += row; 1054c1414c8SBarry Smith work[i1 - 1] = row - oshift; 1064c1414c8SBarry Smith } 1074c1414c8SBarry Smith 1084c1414c8SBarry Smith /* allocate space for column pointers */ 1094c1414c8SBarry Smith nz = ia[nslim_row] + (!ishift); 1109566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nz, &ja)); 1114c1414c8SBarry Smith *jja = ja; 1124c1414c8SBarry Smith 1134c1414c8SBarry Smith /* loop over lower triangular part putting into ja */ 1144c1414c8SBarry Smith for (i1 = 0, row = 0; i1 < nslim_row; row += ns_row[i1], i1++) { 1154c1414c8SBarry Smith j = aj + ai[row] + ishift; 1164c1414c8SBarry Smith jmax = aj + ai[row + 1] + ishift; 11783fed2edSSatish Balay if (j == jmax) continue; /* empty row */ 1184c1414c8SBarry Smith col = *j++ + ishift; 1194c1414c8SBarry Smith i2 = tvc[col]; 1204c1414c8SBarry Smith while (i2 < i1 && j < jmax) { 1214c1414c8SBarry Smith ja[work[i2]++] = i1 + oshift; 1224c1414c8SBarry Smith ja[work[i1]++] = i2 + oshift; 1234c1414c8SBarry Smith ++i2; 12490d2dec7SBarry Smith while ((j < jmax) && ((col = *j + ishift) < tns[i2])) ++j; /* Skip rest col indices in this node */ 1254c1414c8SBarry Smith i2 = tvc[col]; 1264c1414c8SBarry Smith } 1274c1414c8SBarry Smith if (i2 == i1) ja[work[i1]++] = i2 + oshift; 1284c1414c8SBarry Smith } 1299566063dSJacob Faibussowitsch PetscCall(PetscFree(work)); 1309566063dSJacob Faibussowitsch PetscCall(PetscFree2(tns, tvc)); 1313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1324c1414c8SBarry Smith } 1334c1414c8SBarry Smith 1344c1414c8SBarry Smith /* 1354c1414c8SBarry Smith This builds nonsymmetric version of nonzero structure, 1364c1414c8SBarry Smith */ 137d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetRowIJ_SeqAIJ_Inode_Nonsymmetric(Mat A, const PetscInt *iia[], const PetscInt *jja[], PetscInt ishift, PetscInt oshift) 138d71ae5a4SJacob Faibussowitsch { 1394c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 1408758e1faSBarry Smith PetscInt *work, *ia, *ja, nz, nslim_row, n, row, col, *ns_col, nslim_col; 1418758e1faSBarry Smith PetscInt *tns, *tvc, nsz, i1, i2; 1428758e1faSBarry Smith const PetscInt *j, *ai = a->i, *aj = a->j, *ns_row = a->inode.size; 1434c1414c8SBarry Smith 1444c1414c8SBarry Smith PetscFunctionBegin; 14508401ef6SPierre Jolivet PetscCheck(a->inode.size, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 1464c1414c8SBarry Smith nslim_row = a->inode.node_count; 147d0f46423SBarry Smith n = A->cmap->n; 1484c1414c8SBarry Smith 1494c1414c8SBarry Smith /* Create The column_inode for this matrix */ 1509566063dSJacob Faibussowitsch PetscCall(MatCreateColInode_Private(A, &nslim_col, &ns_col)); 1514c1414c8SBarry Smith 15235cb6cd3SPierre Jolivet /* allocate space for reformatted column_inode structure */ 1539566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(nslim_col + 1, &tns, n + 1, &tvc)); 1544c1414c8SBarry Smith for (i1 = 0, tns[0] = 0; i1 < nslim_col; ++i1) tns[i1 + 1] = tns[i1] + ns_col[i1]; 1554c1414c8SBarry Smith 1564c1414c8SBarry Smith for (i1 = 0, col = 0; i1 < nslim_col; ++i1) { 1574c1414c8SBarry Smith nsz = ns_col[i1]; 1582205254eSKarl Rupp for (i2 = 0; i2 < nsz; ++i2, ++col) tvc[col] = i1; 1594c1414c8SBarry Smith } 1604c1414c8SBarry Smith /* allocate space for row pointers */ 1619566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nslim_row + 1, &ia)); 1624c1414c8SBarry Smith *iia = ia; 1639566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nslim_row + 1, &work)); 1644c1414c8SBarry Smith 1654c1414c8SBarry Smith /* determine the number of columns in each row */ 1664c1414c8SBarry Smith ia[0] = oshift; 1674c1414c8SBarry Smith for (i1 = 0, row = 0; i1 < nslim_row; row += ns_row[i1], i1++) { 1684c1414c8SBarry Smith j = aj + ai[row] + ishift; 16983fed2edSSatish Balay nz = ai[row + 1] - ai[row]; 17083fed2edSSatish Balay if (!nz) continue; /* empty row */ 1714c1414c8SBarry Smith col = *j++ + ishift; 1724c1414c8SBarry Smith i2 = tvc[col]; 1736aad120cSJose E. Roman while (nz-- > 0) { /* off-diagonal elements */ 1744c1414c8SBarry Smith ia[i1 + 1]++; 1754c1414c8SBarry Smith i2++; /* Start col of next node */ 176a8e3a797SJed Brown while (nz > 0 && ((col = *j++ + ishift) < tns[i2])) nz--; 1774c1414c8SBarry Smith if (nz > 0) i2 = tvc[col]; 1784c1414c8SBarry Smith } 1794c1414c8SBarry Smith } 1804c1414c8SBarry Smith 1814c1414c8SBarry Smith /* shift ia[i] to point to next row */ 1824c1414c8SBarry Smith for (i1 = 1; i1 < nslim_row + 1; i1++) { 1834c1414c8SBarry Smith row = ia[i1 - 1]; 1844c1414c8SBarry Smith ia[i1] += row; 1854c1414c8SBarry Smith work[i1 - 1] = row - oshift; 1864c1414c8SBarry Smith } 1874c1414c8SBarry Smith 1884c1414c8SBarry Smith /* allocate space for column pointers */ 1894c1414c8SBarry Smith nz = ia[nslim_row] + (!ishift); 1909566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nz, &ja)); 1914c1414c8SBarry Smith *jja = ja; 1924c1414c8SBarry Smith 1934c1414c8SBarry Smith /* loop over matrix putting into ja */ 1944c1414c8SBarry Smith for (i1 = 0, row = 0; i1 < nslim_row; row += ns_row[i1], i1++) { 1954c1414c8SBarry Smith j = aj + ai[row] + ishift; 19683fed2edSSatish Balay nz = ai[row + 1] - ai[row]; 19783fed2edSSatish Balay if (!nz) continue; /* empty row */ 1984c1414c8SBarry Smith col = *j++ + ishift; 1994c1414c8SBarry Smith i2 = tvc[col]; 2004c1414c8SBarry Smith while (nz-- > 0) { 2014c1414c8SBarry Smith ja[work[i1]++] = i2 + oshift; 2024c1414c8SBarry Smith ++i2; 203a8e3a797SJed Brown while (nz > 0 && ((col = *j++ + ishift) < tns[i2])) nz--; 2044c1414c8SBarry Smith if (nz > 0) i2 = tvc[col]; 2054c1414c8SBarry Smith } 2064c1414c8SBarry Smith } 2079566063dSJacob Faibussowitsch PetscCall(PetscFree(ns_col)); 2089566063dSJacob Faibussowitsch PetscCall(PetscFree(work)); 2099566063dSJacob Faibussowitsch PetscCall(PetscFree2(tns, tvc)); 2103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2114c1414c8SBarry Smith } 2124c1414c8SBarry Smith 213d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetRowIJ_SeqAIJ_Inode(Mat A, PetscInt oshift, PetscBool symmetric, PetscBool blockcompressed, PetscInt *n, const PetscInt *ia[], const PetscInt *ja[], PetscBool *done) 214d71ae5a4SJacob Faibussowitsch { 2154c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 2164c1414c8SBarry Smith 2174c1414c8SBarry Smith PetscFunctionBegin; 21850ba90b4SBarry Smith if (n) *n = a->inode.node_count; 2193ba16761SJacob Faibussowitsch if (!ia) PetscFunctionReturn(PETSC_SUCCESS); 2208f7157efSSatish Balay if (!blockcompressed) { 2219566063dSJacob Faibussowitsch PetscCall(MatGetRowIJ_SeqAIJ(A, oshift, symmetric, blockcompressed, n, ia, ja, done)); 2228f7157efSSatish Balay } else if (symmetric) { 2239566063dSJacob Faibussowitsch PetscCall(MatGetRowIJ_SeqAIJ_Inode_Symmetric(A, ia, ja, 0, oshift)); 2244c1414c8SBarry Smith } else { 2259566063dSJacob Faibussowitsch PetscCall(MatGetRowIJ_SeqAIJ_Inode_Nonsymmetric(A, ia, ja, 0, oshift)); 2264c1414c8SBarry Smith } 2273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2284c1414c8SBarry Smith } 2294c1414c8SBarry Smith 230d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatRestoreRowIJ_SeqAIJ_Inode(Mat A, PetscInt oshift, PetscBool symmetric, PetscBool blockcompressed, PetscInt *n, const PetscInt *ia[], const PetscInt *ja[], PetscBool *done) 231d71ae5a4SJacob Faibussowitsch { 2324c1414c8SBarry Smith PetscFunctionBegin; 2333ba16761SJacob Faibussowitsch if (!ia) PetscFunctionReturn(PETSC_SUCCESS); 2348f7157efSSatish Balay 2358f7157efSSatish Balay if (!blockcompressed) { 2369566063dSJacob Faibussowitsch PetscCall(MatRestoreRowIJ_SeqAIJ(A, oshift, symmetric, blockcompressed, n, ia, ja, done)); 2378f7157efSSatish Balay } else { 2389566063dSJacob Faibussowitsch PetscCall(PetscFree(*ia)); 2399566063dSJacob Faibussowitsch PetscCall(PetscFree(*ja)); 2408f7157efSSatish Balay } 2413ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2424c1414c8SBarry Smith } 2434c1414c8SBarry Smith 244d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetColumnIJ_SeqAIJ_Inode_Nonsymmetric(Mat A, const PetscInt *iia[], const PetscInt *jja[], PetscInt ishift, PetscInt oshift) 245d71ae5a4SJacob Faibussowitsch { 2464c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 2474c1414c8SBarry Smith PetscInt *work, *ia, *ja, *j, nz, nslim_row, n, row, col, *ns_col, nslim_col; 2484c1414c8SBarry Smith PetscInt *tns, *tvc, *ns_row = a->inode.size, nsz, i1, i2, *ai = a->i, *aj = a->j; 2494c1414c8SBarry Smith 2504c1414c8SBarry Smith PetscFunctionBegin; 25108401ef6SPierre Jolivet PetscCheck(a->inode.size, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 2524c1414c8SBarry Smith nslim_row = a->inode.node_count; 253d0f46423SBarry Smith n = A->cmap->n; 2544c1414c8SBarry Smith 2554c1414c8SBarry Smith /* Create The column_inode for this matrix */ 2569566063dSJacob Faibussowitsch PetscCall(MatCreateColInode_Private(A, &nslim_col, &ns_col)); 2574c1414c8SBarry Smith 25835cb6cd3SPierre Jolivet /* allocate space for reformatted column_inode structure */ 2599566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(nslim_col + 1, &tns, n + 1, &tvc)); 2604c1414c8SBarry Smith for (i1 = 0, tns[0] = 0; i1 < nslim_col; ++i1) tns[i1 + 1] = tns[i1] + ns_col[i1]; 2614c1414c8SBarry Smith 2624c1414c8SBarry Smith for (i1 = 0, col = 0; i1 < nslim_col; ++i1) { 2634c1414c8SBarry Smith nsz = ns_col[i1]; 2642205254eSKarl Rupp for (i2 = 0; i2 < nsz; ++i2, ++col) tvc[col] = i1; 2654c1414c8SBarry Smith } 2664c1414c8SBarry Smith /* allocate space for column pointers */ 2679566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(nslim_col + 1, &ia)); 2684c1414c8SBarry Smith *iia = ia; 2699566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nslim_col + 1, &work)); 2704c1414c8SBarry Smith 2714c1414c8SBarry Smith /* determine the number of columns in each row */ 2724c1414c8SBarry Smith ia[0] = oshift; 2734c1414c8SBarry Smith for (i1 = 0, row = 0; i1 < nslim_row; row += ns_row[i1], i1++) { 2744c1414c8SBarry Smith j = aj + ai[row] + ishift; 2754c1414c8SBarry Smith col = *j++ + ishift; 2764c1414c8SBarry Smith i2 = tvc[col]; 2774c1414c8SBarry Smith nz = ai[row + 1] - ai[row]; 2786aad120cSJose E. Roman while (nz-- > 0) { /* off-diagonal elements */ 2794c1414c8SBarry Smith /* ia[i1+1]++; */ 2804c1414c8SBarry Smith ia[i2 + 1]++; 2814c1414c8SBarry Smith i2++; 282a8e3a797SJed Brown while (nz > 0 && ((col = *j++ + ishift) < tns[i2])) nz--; 2834c1414c8SBarry Smith if (nz > 0) i2 = tvc[col]; 2844c1414c8SBarry Smith } 2854c1414c8SBarry Smith } 2864c1414c8SBarry Smith 2874c1414c8SBarry Smith /* shift ia[i] to point to next col */ 2884c1414c8SBarry Smith for (i1 = 1; i1 < nslim_col + 1; i1++) { 2894c1414c8SBarry Smith col = ia[i1 - 1]; 2904c1414c8SBarry Smith ia[i1] += col; 2914c1414c8SBarry Smith work[i1 - 1] = col - oshift; 2924c1414c8SBarry Smith } 2934c1414c8SBarry Smith 2944c1414c8SBarry Smith /* allocate space for column pointers */ 2954c1414c8SBarry Smith nz = ia[nslim_col] + (!ishift); 2969566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(nz, &ja)); 2974c1414c8SBarry Smith *jja = ja; 2984c1414c8SBarry Smith 2994c1414c8SBarry Smith /* loop over matrix putting into ja */ 3004c1414c8SBarry Smith for (i1 = 0, row = 0; i1 < nslim_row; row += ns_row[i1], i1++) { 3014c1414c8SBarry Smith j = aj + ai[row] + ishift; 3024c1414c8SBarry Smith col = *j++ + ishift; 3034c1414c8SBarry Smith i2 = tvc[col]; 3044c1414c8SBarry Smith nz = ai[row + 1] - ai[row]; 3054c1414c8SBarry Smith while (nz-- > 0) { 3064c1414c8SBarry Smith /* ja[work[i1]++] = i2 + oshift; */ 3074c1414c8SBarry Smith ja[work[i2]++] = i1 + oshift; 3084c1414c8SBarry Smith i2++; 309a8e3a797SJed Brown while (nz > 0 && ((col = *j++ + ishift) < tns[i2])) nz--; 3104c1414c8SBarry Smith if (nz > 0) i2 = tvc[col]; 3114c1414c8SBarry Smith } 3124c1414c8SBarry Smith } 3139566063dSJacob Faibussowitsch PetscCall(PetscFree(ns_col)); 3149566063dSJacob Faibussowitsch PetscCall(PetscFree(work)); 3159566063dSJacob Faibussowitsch PetscCall(PetscFree2(tns, tvc)); 3163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3174c1414c8SBarry Smith } 3184c1414c8SBarry Smith 319d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetColumnIJ_SeqAIJ_Inode(Mat A, PetscInt oshift, PetscBool symmetric, PetscBool blockcompressed, PetscInt *n, const PetscInt *ia[], const PetscInt *ja[], PetscBool *done) 320d71ae5a4SJacob Faibussowitsch { 3214c1414c8SBarry Smith PetscFunctionBegin; 3229566063dSJacob Faibussowitsch PetscCall(MatCreateColInode_Private(A, n, NULL)); 3233ba16761SJacob Faibussowitsch if (!ia) PetscFunctionReturn(PETSC_SUCCESS); 3244c1414c8SBarry Smith 3258f7157efSSatish Balay if (!blockcompressed) { 3269566063dSJacob Faibussowitsch PetscCall(MatGetColumnIJ_SeqAIJ(A, oshift, symmetric, blockcompressed, n, ia, ja, done)); 3278f7157efSSatish Balay } else if (symmetric) { 328a5b23f4aSJose E. Roman /* Since the indices are symmetric it doesn't matter */ 3299566063dSJacob Faibussowitsch PetscCall(MatGetRowIJ_SeqAIJ_Inode_Symmetric(A, ia, ja, 0, oshift)); 3304c1414c8SBarry Smith } else { 3319566063dSJacob Faibussowitsch PetscCall(MatGetColumnIJ_SeqAIJ_Inode_Nonsymmetric(A, ia, ja, 0, oshift)); 3324c1414c8SBarry Smith } 3333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3344c1414c8SBarry Smith } 3354c1414c8SBarry Smith 336d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatRestoreColumnIJ_SeqAIJ_Inode(Mat A, PetscInt oshift, PetscBool symmetric, PetscBool blockcompressed, PetscInt *n, const PetscInt *ia[], const PetscInt *ja[], PetscBool *done) 337d71ae5a4SJacob Faibussowitsch { 3384c1414c8SBarry Smith PetscFunctionBegin; 3393ba16761SJacob Faibussowitsch if (!ia) PetscFunctionReturn(PETSC_SUCCESS); 3408f7157efSSatish Balay if (!blockcompressed) { 3419566063dSJacob Faibussowitsch PetscCall(MatRestoreColumnIJ_SeqAIJ(A, oshift, symmetric, blockcompressed, n, ia, ja, done)); 3428f7157efSSatish Balay } else { 3439566063dSJacob Faibussowitsch PetscCall(PetscFree(*ia)); 3449566063dSJacob Faibussowitsch PetscCall(PetscFree(*ja)); 3458f7157efSSatish Balay } 3463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3474c1414c8SBarry Smith } 3484c1414c8SBarry Smith 349d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMult_SeqAIJ_Inode(Mat A, Vec xx, Vec yy) 350d71ae5a4SJacob Faibussowitsch { 3514c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 3524c1414c8SBarry Smith PetscScalar sum1, sum2, sum3, sum4, sum5, tmp0, tmp1; 353d9fead3dSBarry Smith PetscScalar *y; 354dd6ea824SBarry Smith const PetscScalar *x; 355dd6ea824SBarry Smith const MatScalar *v1, *v2, *v3, *v4, *v5; 3568758e1faSBarry Smith PetscInt i1, i2, n, i, row, node_max, nsz, sz, nonzerorow = 0; 3578758e1faSBarry Smith const PetscInt *idx, *ns, *ii; 3584c1414c8SBarry Smith 3594c1414c8SBarry Smith #if defined(PETSC_HAVE_PRAGMA_DISJOINT) 3604c1414c8SBarry Smith #pragma disjoint(*x, *y, *v1, *v2, *v3, *v4, *v5) 3614c1414c8SBarry Smith #endif 3624c1414c8SBarry Smith 3634c1414c8SBarry Smith PetscFunctionBegin; 36408401ef6SPierre Jolivet PetscCheck(a->inode.size, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 3654c1414c8SBarry Smith node_max = a->inode.node_count; 3664c1414c8SBarry Smith ns = a->inode.size; /* Node Size array */ 3679566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(xx, &x)); 3689566063dSJacob Faibussowitsch PetscCall(VecGetArray(yy, &y)); 3694c1414c8SBarry Smith idx = a->j; 3704c1414c8SBarry Smith v1 = a->a; 3714c1414c8SBarry Smith ii = a->i; 3724c1414c8SBarry Smith 3734c1414c8SBarry Smith for (i = 0, row = 0; i < node_max; ++i) { 3744c1414c8SBarry Smith nsz = ns[i]; 3754c1414c8SBarry Smith n = ii[1] - ii[0]; 37698c9bda7SSatish Balay nonzerorow += (n > 0) * nsz; 3774c1414c8SBarry Smith ii += nsz; 37850d8bf02SJed Brown PetscPrefetchBlock(idx + nsz * n, n, 0, PETSC_PREFETCH_HINT_NTA); /* Prefetch the indices for the block row after the current one */ 37950d8bf02SJed Brown PetscPrefetchBlock(v1 + nsz * n, nsz * n, 0, PETSC_PREFETCH_HINT_NTA); /* Prefetch the values for the block row after the current one */ 3804c1414c8SBarry Smith sz = n; /* No of non zeros in this row */ 3814c1414c8SBarry Smith /* Switch on the size of Node */ 3824c1414c8SBarry Smith switch (nsz) { /* Each loop in 'case' is unrolled */ 3834c1414c8SBarry Smith case 1: 38475567043SBarry Smith sum1 = 0.; 3854c1414c8SBarry Smith 3864c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 3874c1414c8SBarry Smith i1 = idx[0]; /* The instructions are ordered to */ 3884c1414c8SBarry Smith i2 = idx[1]; /* make the compiler's job easy */ 3894c1414c8SBarry Smith idx += 2; 3904c1414c8SBarry Smith tmp0 = x[i1]; 3914c1414c8SBarry Smith tmp1 = x[i2]; 3929371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 3939371c9d4SSatish Balay v1 += 2; 3944c1414c8SBarry Smith } 3954c1414c8SBarry Smith 3964c1414c8SBarry Smith if (n == sz - 1) { /* Take care of the last nonzero */ 3974c1414c8SBarry Smith tmp0 = x[*idx++]; 3984c1414c8SBarry Smith sum1 += *v1++ * tmp0; 3994c1414c8SBarry Smith } 4004c1414c8SBarry Smith y[row++] = sum1; 4014c1414c8SBarry Smith break; 4024c1414c8SBarry Smith case 2: 40375567043SBarry Smith sum1 = 0.; 40475567043SBarry Smith sum2 = 0.; 4054c1414c8SBarry Smith v2 = v1 + n; 4064c1414c8SBarry Smith 4074c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 4084c1414c8SBarry Smith i1 = idx[0]; 4094c1414c8SBarry Smith i2 = idx[1]; 4104c1414c8SBarry Smith idx += 2; 4114c1414c8SBarry Smith tmp0 = x[i1]; 4124c1414c8SBarry Smith tmp1 = x[i2]; 4139371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 4149371c9d4SSatish Balay v1 += 2; 4159371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 4169371c9d4SSatish Balay v2 += 2; 4174c1414c8SBarry Smith } 4184c1414c8SBarry Smith if (n == sz - 1) { 4194c1414c8SBarry Smith tmp0 = x[*idx++]; 4204c1414c8SBarry Smith sum1 += *v1++ * tmp0; 4214c1414c8SBarry Smith sum2 += *v2++ * tmp0; 4224c1414c8SBarry Smith } 4234c1414c8SBarry Smith y[row++] = sum1; 4244c1414c8SBarry Smith y[row++] = sum2; 4254c1414c8SBarry Smith v1 = v2; /* Since the next block to be processed starts there*/ 4264c1414c8SBarry Smith idx += sz; 4274c1414c8SBarry Smith break; 4284c1414c8SBarry Smith case 3: 42975567043SBarry Smith sum1 = 0.; 43075567043SBarry Smith sum2 = 0.; 43175567043SBarry Smith sum3 = 0.; 4324c1414c8SBarry Smith v2 = v1 + n; 4334c1414c8SBarry Smith v3 = v2 + n; 4344c1414c8SBarry Smith 4354c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 4364c1414c8SBarry Smith i1 = idx[0]; 4374c1414c8SBarry Smith i2 = idx[1]; 4384c1414c8SBarry Smith idx += 2; 4394c1414c8SBarry Smith tmp0 = x[i1]; 4404c1414c8SBarry Smith tmp1 = x[i2]; 4419371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 4429371c9d4SSatish Balay v1 += 2; 4439371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 4449371c9d4SSatish Balay v2 += 2; 4459371c9d4SSatish Balay sum3 += v3[0] * tmp0 + v3[1] * tmp1; 4469371c9d4SSatish Balay v3 += 2; 4474c1414c8SBarry Smith } 4484c1414c8SBarry Smith if (n == sz - 1) { 4494c1414c8SBarry Smith tmp0 = x[*idx++]; 4504c1414c8SBarry Smith sum1 += *v1++ * tmp0; 4514c1414c8SBarry Smith sum2 += *v2++ * tmp0; 4524c1414c8SBarry Smith sum3 += *v3++ * tmp0; 4534c1414c8SBarry Smith } 4544c1414c8SBarry Smith y[row++] = sum1; 4554c1414c8SBarry Smith y[row++] = sum2; 4564c1414c8SBarry Smith y[row++] = sum3; 4574c1414c8SBarry Smith v1 = v3; /* Since the next block to be processed starts there*/ 4584c1414c8SBarry Smith idx += 2 * sz; 4594c1414c8SBarry Smith break; 4604c1414c8SBarry Smith case 4: 46175567043SBarry Smith sum1 = 0.; 46275567043SBarry Smith sum2 = 0.; 46375567043SBarry Smith sum3 = 0.; 46475567043SBarry Smith sum4 = 0.; 4654c1414c8SBarry Smith v2 = v1 + n; 4664c1414c8SBarry Smith v3 = v2 + n; 4674c1414c8SBarry Smith v4 = v3 + n; 4684c1414c8SBarry Smith 4694c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 4704c1414c8SBarry Smith i1 = idx[0]; 4714c1414c8SBarry Smith i2 = idx[1]; 4724c1414c8SBarry Smith idx += 2; 4734c1414c8SBarry Smith tmp0 = x[i1]; 4744c1414c8SBarry Smith tmp1 = x[i2]; 4759371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 4769371c9d4SSatish Balay v1 += 2; 4779371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 4789371c9d4SSatish Balay v2 += 2; 4799371c9d4SSatish Balay sum3 += v3[0] * tmp0 + v3[1] * tmp1; 4809371c9d4SSatish Balay v3 += 2; 4819371c9d4SSatish Balay sum4 += v4[0] * tmp0 + v4[1] * tmp1; 4829371c9d4SSatish Balay v4 += 2; 4834c1414c8SBarry Smith } 4844c1414c8SBarry Smith if (n == sz - 1) { 4854c1414c8SBarry Smith tmp0 = x[*idx++]; 4864c1414c8SBarry Smith sum1 += *v1++ * tmp0; 4874c1414c8SBarry Smith sum2 += *v2++ * tmp0; 4884c1414c8SBarry Smith sum3 += *v3++ * tmp0; 4894c1414c8SBarry Smith sum4 += *v4++ * tmp0; 4904c1414c8SBarry Smith } 4914c1414c8SBarry Smith y[row++] = sum1; 4924c1414c8SBarry Smith y[row++] = sum2; 4934c1414c8SBarry Smith y[row++] = sum3; 4944c1414c8SBarry Smith y[row++] = sum4; 4954c1414c8SBarry Smith v1 = v4; /* Since the next block to be processed starts there*/ 4964c1414c8SBarry Smith idx += 3 * sz; 4974c1414c8SBarry Smith break; 4984c1414c8SBarry Smith case 5: 49975567043SBarry Smith sum1 = 0.; 50075567043SBarry Smith sum2 = 0.; 50175567043SBarry Smith sum3 = 0.; 50275567043SBarry Smith sum4 = 0.; 50375567043SBarry Smith sum5 = 0.; 5044c1414c8SBarry Smith v2 = v1 + n; 5054c1414c8SBarry Smith v3 = v2 + n; 5064c1414c8SBarry Smith v4 = v3 + n; 5074c1414c8SBarry Smith v5 = v4 + n; 5084c1414c8SBarry Smith 5094c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 5104c1414c8SBarry Smith i1 = idx[0]; 5114c1414c8SBarry Smith i2 = idx[1]; 5124c1414c8SBarry Smith idx += 2; 5134c1414c8SBarry Smith tmp0 = x[i1]; 5144c1414c8SBarry Smith tmp1 = x[i2]; 5159371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 5169371c9d4SSatish Balay v1 += 2; 5179371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 5189371c9d4SSatish Balay v2 += 2; 5199371c9d4SSatish Balay sum3 += v3[0] * tmp0 + v3[1] * tmp1; 5209371c9d4SSatish Balay v3 += 2; 5219371c9d4SSatish Balay sum4 += v4[0] * tmp0 + v4[1] * tmp1; 5229371c9d4SSatish Balay v4 += 2; 5239371c9d4SSatish Balay sum5 += v5[0] * tmp0 + v5[1] * tmp1; 5249371c9d4SSatish Balay v5 += 2; 5254c1414c8SBarry Smith } 5264c1414c8SBarry Smith if (n == sz - 1) { 5274c1414c8SBarry Smith tmp0 = x[*idx++]; 5284c1414c8SBarry Smith sum1 += *v1++ * tmp0; 5294c1414c8SBarry Smith sum2 += *v2++ * tmp0; 5304c1414c8SBarry Smith sum3 += *v3++ * tmp0; 5314c1414c8SBarry Smith sum4 += *v4++ * tmp0; 5324c1414c8SBarry Smith sum5 += *v5++ * tmp0; 5334c1414c8SBarry Smith } 5344c1414c8SBarry Smith y[row++] = sum1; 5354c1414c8SBarry Smith y[row++] = sum2; 5364c1414c8SBarry Smith y[row++] = sum3; 5374c1414c8SBarry Smith y[row++] = sum4; 5384c1414c8SBarry Smith y[row++] = sum5; 5394c1414c8SBarry Smith v1 = v5; /* Since the next block to be processed starts there */ 5404c1414c8SBarry Smith idx += 4 * sz; 5414c1414c8SBarry Smith break; 542d71ae5a4SJacob Faibussowitsch default: 543d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not yet supported"); 5444c1414c8SBarry Smith } 5454c1414c8SBarry Smith } 5469566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(xx, &x)); 5479566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(yy, &y)); 5489566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * a->nz - nonzerorow)); 5493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5504c1414c8SBarry Smith } 5512ef1f0ffSBarry Smith 5524108e4d5SBarry Smith /* Almost same code as the MatMult_SeqAIJ_Inode() */ 553d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMultAdd_SeqAIJ_Inode(Mat A, Vec xx, Vec zz, Vec yy) 554d71ae5a4SJacob Faibussowitsch { 5554c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 5564c1414c8SBarry Smith PetscScalar sum1, sum2, sum3, sum4, sum5, tmp0, tmp1; 5578758e1faSBarry Smith const MatScalar *v1, *v2, *v3, *v4, *v5; 5588758e1faSBarry Smith const PetscScalar *x; 5598758e1faSBarry Smith PetscScalar *y, *z, *zt; 5608758e1faSBarry Smith PetscInt i1, i2, n, i, row, node_max, nsz, sz; 5618758e1faSBarry Smith const PetscInt *idx, *ns, *ii; 5624c1414c8SBarry Smith 5634c1414c8SBarry Smith PetscFunctionBegin; 56408401ef6SPierre Jolivet PetscCheck(a->inode.size, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 5654c1414c8SBarry Smith node_max = a->inode.node_count; 5664c1414c8SBarry Smith ns = a->inode.size; /* Node Size array */ 5672205254eSKarl Rupp 5689566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(xx, &x)); 5699566063dSJacob Faibussowitsch PetscCall(VecGetArrayPair(zz, yy, &z, &y)); 5704c1414c8SBarry Smith zt = z; 5714c1414c8SBarry Smith 5724c1414c8SBarry Smith idx = a->j; 5734c1414c8SBarry Smith v1 = a->a; 5744c1414c8SBarry Smith ii = a->i; 5754c1414c8SBarry Smith 5764c1414c8SBarry Smith for (i = 0, row = 0; i < node_max; ++i) { 5774c1414c8SBarry Smith nsz = ns[i]; 5784c1414c8SBarry Smith n = ii[1] - ii[0]; 5794c1414c8SBarry Smith ii += nsz; 5804c1414c8SBarry Smith sz = n; /* No of non zeros in this row */ 5814c1414c8SBarry Smith /* Switch on the size of Node */ 5824c1414c8SBarry Smith switch (nsz) { /* Each loop in 'case' is unrolled */ 5834c1414c8SBarry Smith case 1: 5844c1414c8SBarry Smith sum1 = *zt++; 5854c1414c8SBarry Smith 5864c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 5874c1414c8SBarry Smith i1 = idx[0]; /* The instructions are ordered to */ 5884c1414c8SBarry Smith i2 = idx[1]; /* make the compiler's job easy */ 5894c1414c8SBarry Smith idx += 2; 5904c1414c8SBarry Smith tmp0 = x[i1]; 5914c1414c8SBarry Smith tmp1 = x[i2]; 5929371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 5939371c9d4SSatish Balay v1 += 2; 5944c1414c8SBarry Smith } 5954c1414c8SBarry Smith 5964c1414c8SBarry Smith if (n == sz - 1) { /* Take care of the last nonzero */ 5974c1414c8SBarry Smith tmp0 = x[*idx++]; 5984c1414c8SBarry Smith sum1 += *v1++ * tmp0; 5994c1414c8SBarry Smith } 6004c1414c8SBarry Smith y[row++] = sum1; 6014c1414c8SBarry Smith break; 6024c1414c8SBarry Smith case 2: 6034c1414c8SBarry Smith sum1 = *zt++; 6044c1414c8SBarry Smith sum2 = *zt++; 6054c1414c8SBarry Smith v2 = v1 + n; 6064c1414c8SBarry Smith 6074c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 6084c1414c8SBarry Smith i1 = idx[0]; 6094c1414c8SBarry Smith i2 = idx[1]; 6104c1414c8SBarry Smith idx += 2; 6114c1414c8SBarry Smith tmp0 = x[i1]; 6124c1414c8SBarry Smith tmp1 = x[i2]; 6139371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 6149371c9d4SSatish Balay v1 += 2; 6159371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 6169371c9d4SSatish Balay v2 += 2; 6174c1414c8SBarry Smith } 6184c1414c8SBarry Smith if (n == sz - 1) { 6194c1414c8SBarry Smith tmp0 = x[*idx++]; 6204c1414c8SBarry Smith sum1 += *v1++ * tmp0; 6214c1414c8SBarry Smith sum2 += *v2++ * tmp0; 6224c1414c8SBarry Smith } 6234c1414c8SBarry Smith y[row++] = sum1; 6244c1414c8SBarry Smith y[row++] = sum2; 6254c1414c8SBarry Smith v1 = v2; /* Since the next block to be processed starts there*/ 6264c1414c8SBarry Smith idx += sz; 6274c1414c8SBarry Smith break; 6284c1414c8SBarry Smith case 3: 6294c1414c8SBarry Smith sum1 = *zt++; 6304c1414c8SBarry Smith sum2 = *zt++; 6314c1414c8SBarry Smith sum3 = *zt++; 6324c1414c8SBarry Smith v2 = v1 + n; 6334c1414c8SBarry Smith v3 = v2 + n; 6344c1414c8SBarry Smith 6354c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 6364c1414c8SBarry Smith i1 = idx[0]; 6374c1414c8SBarry Smith i2 = idx[1]; 6384c1414c8SBarry Smith idx += 2; 6394c1414c8SBarry Smith tmp0 = x[i1]; 6404c1414c8SBarry Smith tmp1 = x[i2]; 6419371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 6429371c9d4SSatish Balay v1 += 2; 6439371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 6449371c9d4SSatish Balay v2 += 2; 6459371c9d4SSatish Balay sum3 += v3[0] * tmp0 + v3[1] * tmp1; 6469371c9d4SSatish Balay v3 += 2; 6474c1414c8SBarry Smith } 6484c1414c8SBarry Smith if (n == sz - 1) { 6494c1414c8SBarry Smith tmp0 = x[*idx++]; 6504c1414c8SBarry Smith sum1 += *v1++ * tmp0; 6514c1414c8SBarry Smith sum2 += *v2++ * tmp0; 6524c1414c8SBarry Smith sum3 += *v3++ * tmp0; 6534c1414c8SBarry Smith } 6544c1414c8SBarry Smith y[row++] = sum1; 6554c1414c8SBarry Smith y[row++] = sum2; 6564c1414c8SBarry Smith y[row++] = sum3; 6574c1414c8SBarry Smith v1 = v3; /* Since the next block to be processed starts there*/ 6584c1414c8SBarry Smith idx += 2 * sz; 6594c1414c8SBarry Smith break; 6604c1414c8SBarry Smith case 4: 6614c1414c8SBarry Smith sum1 = *zt++; 6624c1414c8SBarry Smith sum2 = *zt++; 6634c1414c8SBarry Smith sum3 = *zt++; 6644c1414c8SBarry Smith sum4 = *zt++; 6654c1414c8SBarry Smith v2 = v1 + n; 6664c1414c8SBarry Smith v3 = v2 + n; 6674c1414c8SBarry Smith v4 = v3 + n; 6684c1414c8SBarry Smith 6694c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 6704c1414c8SBarry Smith i1 = idx[0]; 6714c1414c8SBarry Smith i2 = idx[1]; 6724c1414c8SBarry Smith idx += 2; 6734c1414c8SBarry Smith tmp0 = x[i1]; 6744c1414c8SBarry Smith tmp1 = x[i2]; 6759371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 6769371c9d4SSatish Balay v1 += 2; 6779371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 6789371c9d4SSatish Balay v2 += 2; 6799371c9d4SSatish Balay sum3 += v3[0] * tmp0 + v3[1] * tmp1; 6809371c9d4SSatish Balay v3 += 2; 6819371c9d4SSatish Balay sum4 += v4[0] * tmp0 + v4[1] * tmp1; 6829371c9d4SSatish Balay v4 += 2; 6834c1414c8SBarry Smith } 6844c1414c8SBarry Smith if (n == sz - 1) { 6854c1414c8SBarry Smith tmp0 = x[*idx++]; 6864c1414c8SBarry Smith sum1 += *v1++ * tmp0; 6874c1414c8SBarry Smith sum2 += *v2++ * tmp0; 6884c1414c8SBarry Smith sum3 += *v3++ * tmp0; 6894c1414c8SBarry Smith sum4 += *v4++ * tmp0; 6904c1414c8SBarry Smith } 6914c1414c8SBarry Smith y[row++] = sum1; 6924c1414c8SBarry Smith y[row++] = sum2; 6934c1414c8SBarry Smith y[row++] = sum3; 6944c1414c8SBarry Smith y[row++] = sum4; 6954c1414c8SBarry Smith v1 = v4; /* Since the next block to be processed starts there*/ 6964c1414c8SBarry Smith idx += 3 * sz; 6974c1414c8SBarry Smith break; 6984c1414c8SBarry Smith case 5: 6994c1414c8SBarry Smith sum1 = *zt++; 7004c1414c8SBarry Smith sum2 = *zt++; 7014c1414c8SBarry Smith sum3 = *zt++; 7024c1414c8SBarry Smith sum4 = *zt++; 7034c1414c8SBarry Smith sum5 = *zt++; 7044c1414c8SBarry Smith v2 = v1 + n; 7054c1414c8SBarry Smith v3 = v2 + n; 7064c1414c8SBarry Smith v4 = v3 + n; 7074c1414c8SBarry Smith v5 = v4 + n; 7084c1414c8SBarry Smith 7094c1414c8SBarry Smith for (n = 0; n < sz - 1; n += 2) { 7104c1414c8SBarry Smith i1 = idx[0]; 7114c1414c8SBarry Smith i2 = idx[1]; 7124c1414c8SBarry Smith idx += 2; 7134c1414c8SBarry Smith tmp0 = x[i1]; 7144c1414c8SBarry Smith tmp1 = x[i2]; 7159371c9d4SSatish Balay sum1 += v1[0] * tmp0 + v1[1] * tmp1; 7169371c9d4SSatish Balay v1 += 2; 7179371c9d4SSatish Balay sum2 += v2[0] * tmp0 + v2[1] * tmp1; 7189371c9d4SSatish Balay v2 += 2; 7199371c9d4SSatish Balay sum3 += v3[0] * tmp0 + v3[1] * tmp1; 7209371c9d4SSatish Balay v3 += 2; 7219371c9d4SSatish Balay sum4 += v4[0] * tmp0 + v4[1] * tmp1; 7229371c9d4SSatish Balay v4 += 2; 7239371c9d4SSatish Balay sum5 += v5[0] * tmp0 + v5[1] * tmp1; 7249371c9d4SSatish Balay v5 += 2; 7254c1414c8SBarry Smith } 7264c1414c8SBarry Smith if (n == sz - 1) { 7274c1414c8SBarry Smith tmp0 = x[*idx++]; 7284c1414c8SBarry Smith sum1 += *v1++ * tmp0; 7294c1414c8SBarry Smith sum2 += *v2++ * tmp0; 7304c1414c8SBarry Smith sum3 += *v3++ * tmp0; 7314c1414c8SBarry Smith sum4 += *v4++ * tmp0; 7324c1414c8SBarry Smith sum5 += *v5++ * tmp0; 7334c1414c8SBarry Smith } 7344c1414c8SBarry Smith y[row++] = sum1; 7354c1414c8SBarry Smith y[row++] = sum2; 7364c1414c8SBarry Smith y[row++] = sum3; 7374c1414c8SBarry Smith y[row++] = sum4; 7384c1414c8SBarry Smith y[row++] = sum5; 7394c1414c8SBarry Smith v1 = v5; /* Since the next block to be processed starts there */ 7404c1414c8SBarry Smith idx += 4 * sz; 7414c1414c8SBarry Smith break; 742d71ae5a4SJacob Faibussowitsch default: 743d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not yet supported"); 7444c1414c8SBarry Smith } 7454c1414c8SBarry Smith } 7469566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(xx, &x)); 7479566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayPair(zz, yy, &z, &y)); 7489566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * a->nz)); 7493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7504c1414c8SBarry Smith } 7514c1414c8SBarry Smith 752ff6a9541SJacob Faibussowitsch static PetscErrorCode MatSolve_SeqAIJ_Inode_inplace(Mat A, Vec bb, Vec xx) 753d71ae5a4SJacob Faibussowitsch { 7544c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 7554c1414c8SBarry Smith IS iscol = a->col, isrow = a->row; 7565d0c19d7SBarry Smith const PetscInt *r, *c, *rout, *cout; 7578758e1faSBarry Smith PetscInt i, j, n = A->rmap->n, nz; 7588758e1faSBarry Smith PetscInt node_max, *ns, row, nsz, aii, i0, i1; 7598758e1faSBarry Smith const PetscInt *ai = a->i, *a_j = a->j, *vi, *ad, *aj; 760d9fead3dSBarry Smith PetscScalar *x, *tmp, *tmps, tmp0, tmp1; 761d9fead3dSBarry Smith PetscScalar sum1, sum2, sum3, sum4, sum5; 762dd6ea824SBarry Smith const MatScalar *v1, *v2, *v3, *v4, *v5, *a_a = a->a, *aa; 763dd6ea824SBarry Smith const PetscScalar *b; 7644c1414c8SBarry Smith 7654c1414c8SBarry Smith PetscFunctionBegin; 76608401ef6SPierre Jolivet PetscCheck(a->inode.size, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 7674c1414c8SBarry Smith node_max = a->inode.node_count; 7684c1414c8SBarry Smith ns = a->inode.size; /* Node Size array */ 7694c1414c8SBarry Smith 7709566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(bb, &b)); 7719566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(xx, &x)); 7724c1414c8SBarry Smith tmp = a->solve_work; 7734c1414c8SBarry Smith 7749371c9d4SSatish Balay PetscCall(ISGetIndices(isrow, &rout)); 7759371c9d4SSatish Balay r = rout; 7769371c9d4SSatish Balay PetscCall(ISGetIndices(iscol, &cout)); 7779371c9d4SSatish Balay c = cout + (n - 1); 7784c1414c8SBarry Smith 7794c1414c8SBarry Smith /* forward solve the lower triangular */ 7804c1414c8SBarry Smith tmps = tmp; 7814c1414c8SBarry Smith aa = a_a; 7824c1414c8SBarry Smith aj = a_j; 7834c1414c8SBarry Smith ad = a->diag; 7844c1414c8SBarry Smith 7854c1414c8SBarry Smith for (i = 0, row = 0; i < node_max; ++i) { 7864c1414c8SBarry Smith nsz = ns[i]; 7874c1414c8SBarry Smith aii = ai[row]; 7884c1414c8SBarry Smith v1 = aa + aii; 7894c1414c8SBarry Smith vi = aj + aii; 7904c1414c8SBarry Smith nz = ad[row] - aii; 79126549573SJed Brown if (i < node_max - 1) { 79226549573SJed Brown /* Prefetch the block after the current one, the prefetch itself can't cause a memory error, 79326549573SJed Brown * but our indexing to determine it's size could. */ 79450d8bf02SJed Brown PetscPrefetchBlock(aj + ai[row + nsz], ad[row + nsz] - ai[row + nsz], 0, PETSC_PREFETCH_HINT_NTA); /* indices */ 79526549573SJed Brown /* In my tests, it seems to be better to fetch entire rows instead of just the lower-triangular part */ 79650d8bf02SJed Brown PetscPrefetchBlock(aa + ai[row + nsz], ad[row + nsz + ns[i + 1] - 1] - ai[row + nsz], 0, PETSC_PREFETCH_HINT_NTA); 79726549573SJed Brown /* for (j=0; j<ns[i+1]; j++) PetscPrefetchBlock(aa+ai[row+nsz+j],ad[row+nsz+j]-ai[row+nsz+j],0,0); */ 79826549573SJed Brown } 7994c1414c8SBarry Smith 8004c1414c8SBarry Smith switch (nsz) { /* Each loop in 'case' is unrolled */ 8014c1414c8SBarry Smith case 1: 8024c1414c8SBarry Smith sum1 = b[*r++]; 8034c1414c8SBarry Smith for (j = 0; j < nz - 1; j += 2) { 8044c1414c8SBarry Smith i0 = vi[0]; 8054c1414c8SBarry Smith i1 = vi[1]; 8064c1414c8SBarry Smith vi += 2; 8074c1414c8SBarry Smith tmp0 = tmps[i0]; 8084c1414c8SBarry Smith tmp1 = tmps[i1]; 8099371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 8109371c9d4SSatish Balay v1 += 2; 8114c1414c8SBarry Smith } 8124c1414c8SBarry Smith if (j == nz - 1) { 8134c1414c8SBarry Smith tmp0 = tmps[*vi++]; 8144c1414c8SBarry Smith sum1 -= *v1++ * tmp0; 8154c1414c8SBarry Smith } 8164c1414c8SBarry Smith tmp[row++] = sum1; 8174c1414c8SBarry Smith break; 8184c1414c8SBarry Smith case 2: 8194c1414c8SBarry Smith sum1 = b[*r++]; 8204c1414c8SBarry Smith sum2 = b[*r++]; 8214c1414c8SBarry Smith v2 = aa + ai[row + 1]; 8224c1414c8SBarry Smith 8234c1414c8SBarry Smith for (j = 0; j < nz - 1; j += 2) { 8244c1414c8SBarry Smith i0 = vi[0]; 8254c1414c8SBarry Smith i1 = vi[1]; 8264c1414c8SBarry Smith vi += 2; 8274c1414c8SBarry Smith tmp0 = tmps[i0]; 8284c1414c8SBarry Smith tmp1 = tmps[i1]; 8299371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 8309371c9d4SSatish Balay v1 += 2; 8319371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 8329371c9d4SSatish Balay v2 += 2; 8334c1414c8SBarry Smith } 8344c1414c8SBarry Smith if (j == nz - 1) { 8354c1414c8SBarry Smith tmp0 = tmps[*vi++]; 8364c1414c8SBarry Smith sum1 -= *v1++ * tmp0; 8374c1414c8SBarry Smith sum2 -= *v2++ * tmp0; 8384c1414c8SBarry Smith } 8394c1414c8SBarry Smith sum2 -= *v2++ * sum1; 8404c1414c8SBarry Smith tmp[row++] = sum1; 8414c1414c8SBarry Smith tmp[row++] = sum2; 8424c1414c8SBarry Smith break; 8434c1414c8SBarry Smith case 3: 8444c1414c8SBarry Smith sum1 = b[*r++]; 8454c1414c8SBarry Smith sum2 = b[*r++]; 8464c1414c8SBarry Smith sum3 = b[*r++]; 8474c1414c8SBarry Smith v2 = aa + ai[row + 1]; 8484c1414c8SBarry Smith v3 = aa + ai[row + 2]; 8494c1414c8SBarry Smith 8504c1414c8SBarry Smith for (j = 0; j < nz - 1; j += 2) { 8514c1414c8SBarry Smith i0 = vi[0]; 8524c1414c8SBarry Smith i1 = vi[1]; 8534c1414c8SBarry Smith vi += 2; 8544c1414c8SBarry Smith tmp0 = tmps[i0]; 8554c1414c8SBarry Smith tmp1 = tmps[i1]; 8569371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 8579371c9d4SSatish Balay v1 += 2; 8589371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 8599371c9d4SSatish Balay v2 += 2; 8609371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 8619371c9d4SSatish Balay v3 += 2; 8624c1414c8SBarry Smith } 8634c1414c8SBarry Smith if (j == nz - 1) { 8644c1414c8SBarry Smith tmp0 = tmps[*vi++]; 8654c1414c8SBarry Smith sum1 -= *v1++ * tmp0; 8664c1414c8SBarry Smith sum2 -= *v2++ * tmp0; 8674c1414c8SBarry Smith sum3 -= *v3++ * tmp0; 8684c1414c8SBarry Smith } 8694c1414c8SBarry Smith sum2 -= *v2++ * sum1; 8704c1414c8SBarry Smith sum3 -= *v3++ * sum1; 8714c1414c8SBarry Smith sum3 -= *v3++ * sum2; 8722205254eSKarl Rupp 8734c1414c8SBarry Smith tmp[row++] = sum1; 8744c1414c8SBarry Smith tmp[row++] = sum2; 8754c1414c8SBarry Smith tmp[row++] = sum3; 8764c1414c8SBarry Smith break; 8774c1414c8SBarry Smith 8784c1414c8SBarry Smith case 4: 8794c1414c8SBarry Smith sum1 = b[*r++]; 8804c1414c8SBarry Smith sum2 = b[*r++]; 8814c1414c8SBarry Smith sum3 = b[*r++]; 8824c1414c8SBarry Smith sum4 = b[*r++]; 8834c1414c8SBarry Smith v2 = aa + ai[row + 1]; 8844c1414c8SBarry Smith v3 = aa + ai[row + 2]; 8854c1414c8SBarry Smith v4 = aa + ai[row + 3]; 8864c1414c8SBarry Smith 8874c1414c8SBarry Smith for (j = 0; j < nz - 1; j += 2) { 8884c1414c8SBarry Smith i0 = vi[0]; 8894c1414c8SBarry Smith i1 = vi[1]; 8904c1414c8SBarry Smith vi += 2; 8914c1414c8SBarry Smith tmp0 = tmps[i0]; 8924c1414c8SBarry Smith tmp1 = tmps[i1]; 8939371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 8949371c9d4SSatish Balay v1 += 2; 8959371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 8969371c9d4SSatish Balay v2 += 2; 8979371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 8989371c9d4SSatish Balay v3 += 2; 8999371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 9009371c9d4SSatish Balay v4 += 2; 9014c1414c8SBarry Smith } 9024c1414c8SBarry Smith if (j == nz - 1) { 9034c1414c8SBarry Smith tmp0 = tmps[*vi++]; 9044c1414c8SBarry Smith sum1 -= *v1++ * tmp0; 9054c1414c8SBarry Smith sum2 -= *v2++ * tmp0; 9064c1414c8SBarry Smith sum3 -= *v3++ * tmp0; 9074c1414c8SBarry Smith sum4 -= *v4++ * tmp0; 9084c1414c8SBarry Smith } 9094c1414c8SBarry Smith sum2 -= *v2++ * sum1; 9104c1414c8SBarry Smith sum3 -= *v3++ * sum1; 9114c1414c8SBarry Smith sum4 -= *v4++ * sum1; 9124c1414c8SBarry Smith sum3 -= *v3++ * sum2; 9134c1414c8SBarry Smith sum4 -= *v4++ * sum2; 9144c1414c8SBarry Smith sum4 -= *v4++ * sum3; 9154c1414c8SBarry Smith 9164c1414c8SBarry Smith tmp[row++] = sum1; 9174c1414c8SBarry Smith tmp[row++] = sum2; 9184c1414c8SBarry Smith tmp[row++] = sum3; 9194c1414c8SBarry Smith tmp[row++] = sum4; 9204c1414c8SBarry Smith break; 9214c1414c8SBarry Smith case 5: 9224c1414c8SBarry Smith sum1 = b[*r++]; 9234c1414c8SBarry Smith sum2 = b[*r++]; 9244c1414c8SBarry Smith sum3 = b[*r++]; 9254c1414c8SBarry Smith sum4 = b[*r++]; 9264c1414c8SBarry Smith sum5 = b[*r++]; 9274c1414c8SBarry Smith v2 = aa + ai[row + 1]; 9284c1414c8SBarry Smith v3 = aa + ai[row + 2]; 9294c1414c8SBarry Smith v4 = aa + ai[row + 3]; 9304c1414c8SBarry Smith v5 = aa + ai[row + 4]; 9314c1414c8SBarry Smith 9324c1414c8SBarry Smith for (j = 0; j < nz - 1; j += 2) { 9334c1414c8SBarry Smith i0 = vi[0]; 9344c1414c8SBarry Smith i1 = vi[1]; 9354c1414c8SBarry Smith vi += 2; 9364c1414c8SBarry Smith tmp0 = tmps[i0]; 9374c1414c8SBarry Smith tmp1 = tmps[i1]; 9389371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 9399371c9d4SSatish Balay v1 += 2; 9409371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 9419371c9d4SSatish Balay v2 += 2; 9429371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 9439371c9d4SSatish Balay v3 += 2; 9449371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 9459371c9d4SSatish Balay v4 += 2; 9469371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 9479371c9d4SSatish Balay v5 += 2; 9484c1414c8SBarry Smith } 9494c1414c8SBarry Smith if (j == nz - 1) { 9504c1414c8SBarry Smith tmp0 = tmps[*vi++]; 9514c1414c8SBarry Smith sum1 -= *v1++ * tmp0; 9524c1414c8SBarry Smith sum2 -= *v2++ * tmp0; 9534c1414c8SBarry Smith sum3 -= *v3++ * tmp0; 9544c1414c8SBarry Smith sum4 -= *v4++ * tmp0; 9554c1414c8SBarry Smith sum5 -= *v5++ * tmp0; 9564c1414c8SBarry Smith } 9574c1414c8SBarry Smith 9584c1414c8SBarry Smith sum2 -= *v2++ * sum1; 9594c1414c8SBarry Smith sum3 -= *v3++ * sum1; 9604c1414c8SBarry Smith sum4 -= *v4++ * sum1; 9614c1414c8SBarry Smith sum5 -= *v5++ * sum1; 9624c1414c8SBarry Smith sum3 -= *v3++ * sum2; 9634c1414c8SBarry Smith sum4 -= *v4++ * sum2; 9644c1414c8SBarry Smith sum5 -= *v5++ * sum2; 9654c1414c8SBarry Smith sum4 -= *v4++ * sum3; 9664c1414c8SBarry Smith sum5 -= *v5++ * sum3; 9674c1414c8SBarry Smith sum5 -= *v5++ * sum4; 9684c1414c8SBarry Smith 9694c1414c8SBarry Smith tmp[row++] = sum1; 9704c1414c8SBarry Smith tmp[row++] = sum2; 9714c1414c8SBarry Smith tmp[row++] = sum3; 9724c1414c8SBarry Smith tmp[row++] = sum4; 9734c1414c8SBarry Smith tmp[row++] = sum5; 9744c1414c8SBarry Smith break; 975d71ae5a4SJacob Faibussowitsch default: 976d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not yet supported "); 9774c1414c8SBarry Smith } 9784c1414c8SBarry Smith } 9794c1414c8SBarry Smith /* backward solve the upper triangular */ 9804c1414c8SBarry Smith for (i = node_max - 1, row = n - 1; i >= 0; i--) { 9814c1414c8SBarry Smith nsz = ns[i]; 9824c1414c8SBarry Smith aii = ai[row + 1] - 1; 9834c1414c8SBarry Smith v1 = aa + aii; 9844c1414c8SBarry Smith vi = aj + aii; 9854c1414c8SBarry Smith nz = aii - ad[row]; 9864c1414c8SBarry Smith switch (nsz) { /* Each loop in 'case' is unrolled */ 9874c1414c8SBarry Smith case 1: 9884c1414c8SBarry Smith sum1 = tmp[row]; 9894c1414c8SBarry Smith 9904c1414c8SBarry Smith for (j = nz; j > 1; j -= 2) { 9914c1414c8SBarry Smith vi -= 2; 9924c1414c8SBarry Smith i0 = vi[2]; 9934c1414c8SBarry Smith i1 = vi[1]; 9944c1414c8SBarry Smith tmp0 = tmps[i0]; 9954c1414c8SBarry Smith tmp1 = tmps[i1]; 9964c1414c8SBarry Smith v1 -= 2; 9974c1414c8SBarry Smith sum1 -= v1[2] * tmp0 + v1[1] * tmp1; 9984c1414c8SBarry Smith } 9994c1414c8SBarry Smith if (j == 1) { 10004c1414c8SBarry Smith tmp0 = tmps[*vi--]; 10014c1414c8SBarry Smith sum1 -= *v1-- * tmp0; 10024c1414c8SBarry Smith } 10039371c9d4SSatish Balay x[*c--] = tmp[row] = sum1 * a_a[ad[row]]; 10049371c9d4SSatish Balay row--; 10054c1414c8SBarry Smith break; 10064c1414c8SBarry Smith case 2: 10074c1414c8SBarry Smith sum1 = tmp[row]; 10084c1414c8SBarry Smith sum2 = tmp[row - 1]; 10094c1414c8SBarry Smith v2 = aa + ai[row] - 1; 10104c1414c8SBarry Smith for (j = nz; j > 1; j -= 2) { 10114c1414c8SBarry Smith vi -= 2; 10124c1414c8SBarry Smith i0 = vi[2]; 10134c1414c8SBarry Smith i1 = vi[1]; 10144c1414c8SBarry Smith tmp0 = tmps[i0]; 10154c1414c8SBarry Smith tmp1 = tmps[i1]; 10164c1414c8SBarry Smith v1 -= 2; 10174c1414c8SBarry Smith v2 -= 2; 10184c1414c8SBarry Smith sum1 -= v1[2] * tmp0 + v1[1] * tmp1; 10194c1414c8SBarry Smith sum2 -= v2[2] * tmp0 + v2[1] * tmp1; 10204c1414c8SBarry Smith } 10214c1414c8SBarry Smith if (j == 1) { 10224c1414c8SBarry Smith tmp0 = tmps[*vi--]; 10234c1414c8SBarry Smith sum1 -= *v1-- * tmp0; 10244c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 10254c1414c8SBarry Smith } 10264c1414c8SBarry Smith 10279371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum1 * a_a[ad[row]]; 10289371c9d4SSatish Balay row--; 10294c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 10309371c9d4SSatish Balay x[*c--] = tmp[row] = sum2 * a_a[ad[row]]; 10319371c9d4SSatish Balay row--; 10324c1414c8SBarry Smith break; 10334c1414c8SBarry Smith case 3: 10344c1414c8SBarry Smith sum1 = tmp[row]; 10354c1414c8SBarry Smith sum2 = tmp[row - 1]; 10364c1414c8SBarry Smith sum3 = tmp[row - 2]; 10374c1414c8SBarry Smith v2 = aa + ai[row] - 1; 10384c1414c8SBarry Smith v3 = aa + ai[row - 1] - 1; 10394c1414c8SBarry Smith for (j = nz; j > 1; j -= 2) { 10404c1414c8SBarry Smith vi -= 2; 10414c1414c8SBarry Smith i0 = vi[2]; 10424c1414c8SBarry Smith i1 = vi[1]; 10434c1414c8SBarry Smith tmp0 = tmps[i0]; 10444c1414c8SBarry Smith tmp1 = tmps[i1]; 10454c1414c8SBarry Smith v1 -= 2; 10464c1414c8SBarry Smith v2 -= 2; 10474c1414c8SBarry Smith v3 -= 2; 10484c1414c8SBarry Smith sum1 -= v1[2] * tmp0 + v1[1] * tmp1; 10494c1414c8SBarry Smith sum2 -= v2[2] * tmp0 + v2[1] * tmp1; 10504c1414c8SBarry Smith sum3 -= v3[2] * tmp0 + v3[1] * tmp1; 10514c1414c8SBarry Smith } 10524c1414c8SBarry Smith if (j == 1) { 10534c1414c8SBarry Smith tmp0 = tmps[*vi--]; 10544c1414c8SBarry Smith sum1 -= *v1-- * tmp0; 10554c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 10564c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 10574c1414c8SBarry Smith } 10589371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum1 * a_a[ad[row]]; 10599371c9d4SSatish Balay row--; 10604c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 10614c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 10629371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum2 * a_a[ad[row]]; 10639371c9d4SSatish Balay row--; 10644c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 10659371c9d4SSatish Balay x[*c--] = tmp[row] = sum3 * a_a[ad[row]]; 10669371c9d4SSatish Balay row--; 10674c1414c8SBarry Smith 10684c1414c8SBarry Smith break; 10694c1414c8SBarry Smith case 4: 10704c1414c8SBarry Smith sum1 = tmp[row]; 10714c1414c8SBarry Smith sum2 = tmp[row - 1]; 10724c1414c8SBarry Smith sum3 = tmp[row - 2]; 10734c1414c8SBarry Smith sum4 = tmp[row - 3]; 10744c1414c8SBarry Smith v2 = aa + ai[row] - 1; 10754c1414c8SBarry Smith v3 = aa + ai[row - 1] - 1; 10764c1414c8SBarry Smith v4 = aa + ai[row - 2] - 1; 10774c1414c8SBarry Smith 10784c1414c8SBarry Smith for (j = nz; j > 1; j -= 2) { 10794c1414c8SBarry Smith vi -= 2; 10804c1414c8SBarry Smith i0 = vi[2]; 10814c1414c8SBarry Smith i1 = vi[1]; 10824c1414c8SBarry Smith tmp0 = tmps[i0]; 10834c1414c8SBarry Smith tmp1 = tmps[i1]; 10844c1414c8SBarry Smith v1 -= 2; 10854c1414c8SBarry Smith v2 -= 2; 10864c1414c8SBarry Smith v3 -= 2; 10874c1414c8SBarry Smith v4 -= 2; 10884c1414c8SBarry Smith sum1 -= v1[2] * tmp0 + v1[1] * tmp1; 10894c1414c8SBarry Smith sum2 -= v2[2] * tmp0 + v2[1] * tmp1; 10904c1414c8SBarry Smith sum3 -= v3[2] * tmp0 + v3[1] * tmp1; 10914c1414c8SBarry Smith sum4 -= v4[2] * tmp0 + v4[1] * tmp1; 10924c1414c8SBarry Smith } 10934c1414c8SBarry Smith if (j == 1) { 10944c1414c8SBarry Smith tmp0 = tmps[*vi--]; 10954c1414c8SBarry Smith sum1 -= *v1-- * tmp0; 10964c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 10974c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 10984c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 10994c1414c8SBarry Smith } 11004c1414c8SBarry Smith 11019371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum1 * a_a[ad[row]]; 11029371c9d4SSatish Balay row--; 11034c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 11044c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 11054c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11069371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum2 * a_a[ad[row]]; 11079371c9d4SSatish Balay row--; 11084c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 11094c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11109371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum3 * a_a[ad[row]]; 11119371c9d4SSatish Balay row--; 11124c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11139371c9d4SSatish Balay x[*c--] = tmp[row] = sum4 * a_a[ad[row]]; 11149371c9d4SSatish Balay row--; 11154c1414c8SBarry Smith break; 11164c1414c8SBarry Smith case 5: 11174c1414c8SBarry Smith sum1 = tmp[row]; 11184c1414c8SBarry Smith sum2 = tmp[row - 1]; 11194c1414c8SBarry Smith sum3 = tmp[row - 2]; 11204c1414c8SBarry Smith sum4 = tmp[row - 3]; 11214c1414c8SBarry Smith sum5 = tmp[row - 4]; 11224c1414c8SBarry Smith v2 = aa + ai[row] - 1; 11234c1414c8SBarry Smith v3 = aa + ai[row - 1] - 1; 11244c1414c8SBarry Smith v4 = aa + ai[row - 2] - 1; 11254c1414c8SBarry Smith v5 = aa + ai[row - 3] - 1; 11264c1414c8SBarry Smith for (j = nz; j > 1; j -= 2) { 11274c1414c8SBarry Smith vi -= 2; 11284c1414c8SBarry Smith i0 = vi[2]; 11294c1414c8SBarry Smith i1 = vi[1]; 11304c1414c8SBarry Smith tmp0 = tmps[i0]; 11314c1414c8SBarry Smith tmp1 = tmps[i1]; 11324c1414c8SBarry Smith v1 -= 2; 11334c1414c8SBarry Smith v2 -= 2; 11344c1414c8SBarry Smith v3 -= 2; 11354c1414c8SBarry Smith v4 -= 2; 11364c1414c8SBarry Smith v5 -= 2; 11374c1414c8SBarry Smith sum1 -= v1[2] * tmp0 + v1[1] * tmp1; 11384c1414c8SBarry Smith sum2 -= v2[2] * tmp0 + v2[1] * tmp1; 11394c1414c8SBarry Smith sum3 -= v3[2] * tmp0 + v3[1] * tmp1; 11404c1414c8SBarry Smith sum4 -= v4[2] * tmp0 + v4[1] * tmp1; 11414c1414c8SBarry Smith sum5 -= v5[2] * tmp0 + v5[1] * tmp1; 11424c1414c8SBarry Smith } 11434c1414c8SBarry Smith if (j == 1) { 11444c1414c8SBarry Smith tmp0 = tmps[*vi--]; 11454c1414c8SBarry Smith sum1 -= *v1-- * tmp0; 11464c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 11474c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 11484c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11494c1414c8SBarry Smith sum5 -= *v5-- * tmp0; 11504c1414c8SBarry Smith } 11514c1414c8SBarry Smith 11529371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum1 * a_a[ad[row]]; 11539371c9d4SSatish Balay row--; 11544c1414c8SBarry Smith sum2 -= *v2-- * tmp0; 11554c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 11564c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11574c1414c8SBarry Smith sum5 -= *v5-- * tmp0; 11589371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum2 * a_a[ad[row]]; 11599371c9d4SSatish Balay row--; 11604c1414c8SBarry Smith sum3 -= *v3-- * tmp0; 11614c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11624c1414c8SBarry Smith sum5 -= *v5-- * tmp0; 11639371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum3 * a_a[ad[row]]; 11649371c9d4SSatish Balay row--; 11654c1414c8SBarry Smith sum4 -= *v4-- * tmp0; 11664c1414c8SBarry Smith sum5 -= *v5-- * tmp0; 11679371c9d4SSatish Balay tmp0 = x[*c--] = tmp[row] = sum4 * a_a[ad[row]]; 11689371c9d4SSatish Balay row--; 11694c1414c8SBarry Smith sum5 -= *v5-- * tmp0; 11709371c9d4SSatish Balay x[*c--] = tmp[row] = sum5 * a_a[ad[row]]; 11719371c9d4SSatish Balay row--; 11724c1414c8SBarry Smith break; 1173d71ae5a4SJacob Faibussowitsch default: 1174d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not yet supported "); 11754c1414c8SBarry Smith } 11764c1414c8SBarry Smith } 11779566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &rout)); 11789566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol, &cout)); 11799566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(bb, &b)); 11809566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(xx, &x)); 11819566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * a->nz - A->cmap->n)); 11823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 11834c1414c8SBarry Smith } 11844c1414c8SBarry Smith 1185d71ae5a4SJacob Faibussowitsch PetscErrorCode MatLUFactorNumeric_SeqAIJ_Inode(Mat B, Mat A, const MatFactorInfo *info) 1186d71ae5a4SJacob Faibussowitsch { 118728f1b45aSHong Zhang Mat C = B; 118828f1b45aSHong Zhang Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data, *b = (Mat_SeqAIJ *)C->data; 118928f1b45aSHong Zhang IS isrow = b->row, isicol = b->icol; 119028f1b45aSHong Zhang const PetscInt *r, *ic, *ics; 119128f1b45aSHong Zhang const PetscInt n = A->rmap->n, *ai = a->i, *aj = a->j, *bi = b->i, *bj = b->j, *bdiag = b->diag; 119228f1b45aSHong Zhang PetscInt i, j, k, nz, nzL, row, *pj; 119328f1b45aSHong Zhang const PetscInt *ajtmp, *bjtmp; 11949877982aSShri Abhyankar MatScalar *pc, *pc1, *pc2, *pc3, *pc4, mul1, mul2, mul3, mul4, *pv, *rtmp1, *rtmp2, *rtmp3, *rtmp4; 11959877982aSShri Abhyankar const MatScalar *aa = a->a, *v, *v1, *v2, *v3, *v4; 119628f1b45aSHong Zhang FactorShiftCtx sctx; 11974f81c4b7SBarry Smith const PetscInt *ddiag; 119828f1b45aSHong Zhang PetscReal rs; 119928f1b45aSHong Zhang MatScalar d; 12004f81c4b7SBarry Smith PetscInt inod, nodesz, node_max, col; 12014f81c4b7SBarry Smith const PetscInt *ns; 120207b50cabSHong Zhang PetscInt *tmp_vec1, *tmp_vec2, *nsmap; 12030e95ead3SHong Zhang 120428f1b45aSHong Zhang PetscFunctionBegin; 120528f1b45aSHong Zhang /* MatPivotSetUp(): initialize shift context sctx */ 12069566063dSJacob Faibussowitsch PetscCall(PetscMemzero(&sctx, sizeof(FactorShiftCtx))); 120728f1b45aSHong Zhang 1208f4db908eSBarry Smith if (info->shifttype == (PetscReal)MAT_SHIFT_POSITIVE_DEFINITE) { /* set sctx.shift_top=max{rs} */ 120928f1b45aSHong Zhang ddiag = a->diag; 121028f1b45aSHong Zhang sctx.shift_top = info->zeropivot; 121128f1b45aSHong Zhang for (i = 0; i < n; i++) { 121228f1b45aSHong Zhang /* calculate sum(|aij|)-RealPart(aii), amt of shift needed for this row */ 121328f1b45aSHong Zhang d = (aa)[ddiag[i]]; 121428f1b45aSHong Zhang rs = -PetscAbsScalar(d) - PetscRealPart(d); 121528f1b45aSHong Zhang v = aa + ai[i]; 121628f1b45aSHong Zhang nz = ai[i + 1] - ai[i]; 12172205254eSKarl Rupp for (j = 0; j < nz; j++) rs += PetscAbsScalar(v[j]); 121828f1b45aSHong Zhang if (rs > sctx.shift_top) sctx.shift_top = rs; 121928f1b45aSHong Zhang } 122028f1b45aSHong Zhang sctx.shift_top *= 1.1; 122128f1b45aSHong Zhang sctx.nshift_max = 5; 122228f1b45aSHong Zhang sctx.shift_lo = 0.; 122328f1b45aSHong Zhang sctx.shift_hi = 1.; 122428f1b45aSHong Zhang } 122528f1b45aSHong Zhang 12269566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &r)); 12279566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isicol, &ic)); 122868785679SHong Zhang 12299566063dSJacob Faibussowitsch PetscCall(PetscCalloc4(n, &rtmp1, n, &rtmp2, n, &rtmp3, n, &rtmp4)); 123028f1b45aSHong Zhang ics = ic; 123128f1b45aSHong Zhang 123228f1b45aSHong Zhang node_max = a->inode.node_count; 123328f1b45aSHong Zhang ns = a->inode.size; 123428b400f6SJacob Faibussowitsch PetscCheck(ns, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Matrix without inode information"); 123528f1b45aSHong Zhang 12369877982aSShri Abhyankar /* If max inode size > 4, split it into two inodes.*/ 123768785679SHong Zhang /* also map the inode sizes according to the ordering */ 12389566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n + 1, &tmp_vec1)); 123968785679SHong Zhang for (i = 0, j = 0; i < node_max; ++i, ++j) { 1240b1550197SShri Abhyankar if (ns[i] > 4) { 1241048b5e81SShri Abhyankar tmp_vec1[j] = 4; 124268785679SHong Zhang ++j; 124368785679SHong Zhang tmp_vec1[j] = ns[i] - tmp_vec1[j - 1]; 124468785679SHong Zhang } else { 124568785679SHong Zhang tmp_vec1[j] = ns[i]; 124668785679SHong Zhang } 124768785679SHong Zhang } 124868785679SHong Zhang /* Use the correct node_max */ 124968785679SHong Zhang node_max = j; 125068785679SHong Zhang 125168785679SHong Zhang /* Now reorder the inode info based on mat re-ordering info */ 125268785679SHong Zhang /* First create a row -> inode_size_array_index map */ 12539566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n + 1, &nsmap)); 12549566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(node_max + 1, &tmp_vec2)); 125568785679SHong Zhang for (i = 0, row = 0; i < node_max; i++) { 125668785679SHong Zhang nodesz = tmp_vec1[i]; 1257ad540459SPierre Jolivet for (j = 0; j < nodesz; j++, row++) nsmap[row] = i; 125868785679SHong Zhang } 125968785679SHong Zhang /* Using nsmap, create a reordered ns structure */ 126068785679SHong Zhang for (i = 0, j = 0; i < node_max; i++) { 126168785679SHong Zhang nodesz = tmp_vec1[nsmap[r[j]]]; /* here the reordered row_no is in r[] */ 126268785679SHong Zhang tmp_vec2[i] = nodesz; 126368785679SHong Zhang j += nodesz; 126468785679SHong Zhang } 12659566063dSJacob Faibussowitsch PetscCall(PetscFree(nsmap)); 12669566063dSJacob Faibussowitsch PetscCall(PetscFree(tmp_vec1)); 1267b89f182dSHong Zhang 126868785679SHong Zhang /* Now use the correct ns */ 126968785679SHong Zhang ns = tmp_vec2; 127068785679SHong Zhang 127128f1b45aSHong Zhang do { 127207b50cabSHong Zhang sctx.newshift = PETSC_FALSE; 127328f1b45aSHong Zhang /* Now loop over each block-row, and do the factorization */ 127428f1b45aSHong Zhang for (inod = 0, i = 0; inod < node_max; inod++) { /* i: row index; inod: inode index */ 127528f1b45aSHong Zhang nodesz = ns[inod]; 127628f1b45aSHong Zhang 127728f1b45aSHong Zhang switch (nodesz) { 127828f1b45aSHong Zhang case 1: 1279b89f182dSHong Zhang /* zero rtmp1 */ 128028f1b45aSHong Zhang /* L part */ 128128f1b45aSHong Zhang nz = bi[i + 1] - bi[i]; 128228f1b45aSHong Zhang bjtmp = bj + bi[i]; 1283b89f182dSHong Zhang for (j = 0; j < nz; j++) rtmp1[bjtmp[j]] = 0.0; 128428f1b45aSHong Zhang 128528f1b45aSHong Zhang /* U part */ 128628f1b45aSHong Zhang nz = bdiag[i] - bdiag[i + 1]; 128728f1b45aSHong Zhang bjtmp = bj + bdiag[i + 1] + 1; 1288b89f182dSHong Zhang for (j = 0; j < nz; j++) rtmp1[bjtmp[j]] = 0.0; 128928f1b45aSHong Zhang 129028f1b45aSHong Zhang /* load in initial (unfactored row) */ 129128f1b45aSHong Zhang nz = ai[r[i] + 1] - ai[r[i]]; 129228f1b45aSHong Zhang ajtmp = aj + ai[r[i]]; 129328f1b45aSHong Zhang v = aa + ai[r[i]]; 12942205254eSKarl Rupp for (j = 0; j < nz; j++) rtmp1[ics[ajtmp[j]]] = v[j]; 12952205254eSKarl Rupp 129628f1b45aSHong Zhang /* ZeropivotApply() */ 1297b89f182dSHong Zhang rtmp1[i] += sctx.shift_amount; /* shift the diagonal of the matrix */ 129828f1b45aSHong Zhang 129928f1b45aSHong Zhang /* elimination */ 130028f1b45aSHong Zhang bjtmp = bj + bi[i]; 130128f1b45aSHong Zhang row = *bjtmp++; 130228f1b45aSHong Zhang nzL = bi[i + 1] - bi[i]; 130328f1b45aSHong Zhang for (k = 0; k < nzL; k++) { 1304b89f182dSHong Zhang pc = rtmp1 + row; 130528f1b45aSHong Zhang if (*pc != 0.0) { 130628f1b45aSHong Zhang pv = b->a + bdiag[row]; 1307b89f182dSHong Zhang mul1 = *pc * (*pv); 1308b89f182dSHong Zhang *pc = mul1; 130928f1b45aSHong Zhang pj = b->j + bdiag[row + 1] + 1; /* beginning of U(row,:) */ 131028f1b45aSHong Zhang pv = b->a + bdiag[row + 1] + 1; 131128f1b45aSHong Zhang nz = bdiag[row] - bdiag[row + 1] - 1; /* num of entries in U(row,:) excluding diag */ 1312b89f182dSHong Zhang for (j = 0; j < nz; j++) rtmp1[pj[j]] -= mul1 * pv[j]; 13139566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz)); 131428f1b45aSHong Zhang } 131528f1b45aSHong Zhang row = *bjtmp++; 131628f1b45aSHong Zhang } 131728f1b45aSHong Zhang 131828f1b45aSHong Zhang /* finished row so stick it into b->a */ 131928f1b45aSHong Zhang rs = 0.0; 132028f1b45aSHong Zhang /* L part */ 132128f1b45aSHong Zhang pv = b->a + bi[i]; 132228f1b45aSHong Zhang pj = b->j + bi[i]; 132328f1b45aSHong Zhang nz = bi[i + 1] - bi[i]; 132428f1b45aSHong Zhang for (j = 0; j < nz; j++) { 13259371c9d4SSatish Balay pv[j] = rtmp1[pj[j]]; 13269371c9d4SSatish Balay rs += PetscAbsScalar(pv[j]); 132728f1b45aSHong Zhang } 132828f1b45aSHong Zhang 132928f1b45aSHong Zhang /* U part */ 133028f1b45aSHong Zhang pv = b->a + bdiag[i + 1] + 1; 133128f1b45aSHong Zhang pj = b->j + bdiag[i + 1] + 1; 133228f1b45aSHong Zhang nz = bdiag[i] - bdiag[i + 1] - 1; 133328f1b45aSHong Zhang for (j = 0; j < nz; j++) { 13349371c9d4SSatish Balay pv[j] = rtmp1[pj[j]]; 13359371c9d4SSatish Balay rs += PetscAbsScalar(pv[j]); 133628f1b45aSHong Zhang } 133728f1b45aSHong Zhang 1338b89f182dSHong Zhang /* Check zero pivot */ 133928f1b45aSHong Zhang sctx.rs = rs; 1340b89f182dSHong Zhang sctx.pv = rtmp1[i]; 13419566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i)); 134207b50cabSHong Zhang if (sctx.newshift) break; 134328f1b45aSHong Zhang 1344a5b23f4aSJose E. Roman /* Mark diagonal and invert diagonal for simpler triangular solves */ 134528f1b45aSHong Zhang pv = b->a + bdiag[i]; 1346b89f182dSHong Zhang *pv = 1.0 / sctx.pv; /* sctx.pv = rtmp1[i]+shiftamount if shifttype==MAT_SHIFT_INBLOCKS */ 134728f1b45aSHong Zhang break; 134828f1b45aSHong Zhang 134928f1b45aSHong Zhang case 2: 1350b89f182dSHong Zhang /* zero rtmp1 and rtmp2 */ 135128f1b45aSHong Zhang /* L part */ 135228f1b45aSHong Zhang nz = bi[i + 1] - bi[i]; 135328f1b45aSHong Zhang bjtmp = bj + bi[i]; 135428f1b45aSHong Zhang for (j = 0; j < nz; j++) { 135568785679SHong Zhang col = bjtmp[j]; 13569371c9d4SSatish Balay rtmp1[col] = 0.0; 13579371c9d4SSatish Balay rtmp2[col] = 0.0; 135828f1b45aSHong Zhang } 135928f1b45aSHong Zhang 136028f1b45aSHong Zhang /* U part */ 136128f1b45aSHong Zhang nz = bdiag[i] - bdiag[i + 1]; 136228f1b45aSHong Zhang bjtmp = bj + bdiag[i + 1] + 1; 136328f1b45aSHong Zhang for (j = 0; j < nz; j++) { 136468785679SHong Zhang col = bjtmp[j]; 13659371c9d4SSatish Balay rtmp1[col] = 0.0; 13669371c9d4SSatish Balay rtmp2[col] = 0.0; 136728f1b45aSHong Zhang } 136828f1b45aSHong Zhang 136928f1b45aSHong Zhang /* load in initial (unfactored row) */ 137028f1b45aSHong Zhang nz = ai[r[i] + 1] - ai[r[i]]; 137128f1b45aSHong Zhang ajtmp = aj + ai[r[i]]; 13729371c9d4SSatish Balay v1 = aa + ai[r[i]]; 13739371c9d4SSatish Balay v2 = aa + ai[r[i] + 1]; 137428f1b45aSHong Zhang for (j = 0; j < nz; j++) { 137568785679SHong Zhang col = ics[ajtmp[j]]; 13769371c9d4SSatish Balay rtmp1[col] = v1[j]; 13779371c9d4SSatish Balay rtmp2[col] = v2[j]; 137828f1b45aSHong Zhang } 137928f1b45aSHong Zhang /* ZeropivotApply(): shift the diagonal of the matrix */ 13809371c9d4SSatish Balay rtmp1[i] += sctx.shift_amount; 13819371c9d4SSatish Balay rtmp2[i + 1] += sctx.shift_amount; 138228f1b45aSHong Zhang 138328f1b45aSHong Zhang /* elimination */ 138428f1b45aSHong Zhang bjtmp = bj + bi[i]; 138528f1b45aSHong Zhang row = *bjtmp++; /* pivot row */ 138628f1b45aSHong Zhang nzL = bi[i + 1] - bi[i]; 138728f1b45aSHong Zhang for (k = 0; k < nzL; k++) { 1388b89f182dSHong Zhang pc1 = rtmp1 + row; 1389b89f182dSHong Zhang pc2 = rtmp2 + row; 139028f1b45aSHong Zhang if (*pc1 != 0.0 || *pc2 != 0.0) { 139128f1b45aSHong Zhang pv = b->a + bdiag[row]; 13929371c9d4SSatish Balay mul1 = *pc1 * (*pv); 13939371c9d4SSatish Balay mul2 = *pc2 * (*pv); 13949371c9d4SSatish Balay *pc1 = mul1; 13959371c9d4SSatish Balay *pc2 = mul2; 139628f1b45aSHong Zhang 139728f1b45aSHong Zhang pj = b->j + bdiag[row + 1] + 1; /* beginning of U(row,:) */ 139828f1b45aSHong Zhang pv = b->a + bdiag[row + 1] + 1; 139928f1b45aSHong Zhang nz = bdiag[row] - bdiag[row + 1] - 1; /* num of entries in U(row,:) excluding diag */ 140028f1b45aSHong Zhang for (j = 0; j < nz; j++) { 140168785679SHong Zhang col = pj[j]; 1402b89f182dSHong Zhang rtmp1[col] -= mul1 * pv[j]; 1403b89f182dSHong Zhang rtmp2[col] -= mul2 * pv[j]; 140428f1b45aSHong Zhang } 14059566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2 + 4.0 * nz)); 140628f1b45aSHong Zhang } 140728f1b45aSHong Zhang row = *bjtmp++; 140828f1b45aSHong Zhang } 140928f1b45aSHong Zhang 1410b89f182dSHong Zhang /* finished row i; check zero pivot, then stick row i into b->a */ 141128f1b45aSHong Zhang rs = 0.0; 141228f1b45aSHong Zhang /* L part */ 1413b89f182dSHong Zhang pc1 = b->a + bi[i]; 141428f1b45aSHong Zhang pj = b->j + bi[i]; 141528f1b45aSHong Zhang nz = bi[i + 1] - bi[i]; 141628f1b45aSHong Zhang for (j = 0; j < nz; j++) { 141768785679SHong Zhang col = pj[j]; 14189371c9d4SSatish Balay pc1[j] = rtmp1[col]; 14199371c9d4SSatish Balay rs += PetscAbsScalar(pc1[j]); 142028f1b45aSHong Zhang } 142128f1b45aSHong Zhang /* U part */ 1422b89f182dSHong Zhang pc1 = b->a + bdiag[i + 1] + 1; 142328f1b45aSHong Zhang pj = b->j + bdiag[i + 1] + 1; 14240e7a5c2bSHong Zhang nz = bdiag[i] - bdiag[i + 1] - 1; /* exclude diagonal */ 142528f1b45aSHong Zhang for (j = 0; j < nz; j++) { 142668785679SHong Zhang col = pj[j]; 14279371c9d4SSatish Balay pc1[j] = rtmp1[col]; 14289371c9d4SSatish Balay rs += PetscAbsScalar(pc1[j]); 142928f1b45aSHong Zhang } 143028f1b45aSHong Zhang 143128f1b45aSHong Zhang sctx.rs = rs; 1432b89f182dSHong Zhang sctx.pv = rtmp1[i]; 14339566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i)); 143407b50cabSHong Zhang if (sctx.newshift) break; 1435b89f182dSHong Zhang pc1 = b->a + bdiag[i]; /* Mark diagonal */ 1436b89f182dSHong Zhang *pc1 = 1.0 / sctx.pv; 1437b89f182dSHong Zhang 1438b89f182dSHong Zhang /* Now take care of diagonal 2x2 block. */ 1439b89f182dSHong Zhang pc2 = rtmp2 + i; 1440b89f182dSHong Zhang if (*pc2 != 0.0) { 1441b89f182dSHong Zhang mul1 = (*pc2) * (*pc1); /* *pc1=diag[i] is inverted! */ 1442b89f182dSHong Zhang *pc2 = mul1; /* insert L entry */ 1443b89f182dSHong Zhang pj = b->j + bdiag[i + 1] + 1; /* beginning of U(i,:) */ 1444b89f182dSHong Zhang nz = bdiag[i] - bdiag[i + 1] - 1; /* num of entries in U(i,:) excluding diag */ 1445b89f182dSHong Zhang for (j = 0; j < nz; j++) { 14469371c9d4SSatish Balay col = pj[j]; 14479371c9d4SSatish Balay rtmp2[col] -= mul1 * rtmp1[col]; 144828f1b45aSHong Zhang } 14499566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz)); 1450b89f182dSHong Zhang } 1451b89f182dSHong Zhang 1452b89f182dSHong Zhang /* finished row i+1; check zero pivot, then stick row i+1 into b->a */ 1453b89f182dSHong Zhang rs = 0.0; 1454b89f182dSHong Zhang /* L part */ 1455b89f182dSHong Zhang pc2 = b->a + bi[i + 1]; 1456b89f182dSHong Zhang pj = b->j + bi[i + 1]; 1457b89f182dSHong Zhang nz = bi[i + 2] - bi[i + 1]; 1458b89f182dSHong Zhang for (j = 0; j < nz; j++) { 1459b89f182dSHong Zhang col = pj[j]; 14609371c9d4SSatish Balay pc2[j] = rtmp2[col]; 14619371c9d4SSatish Balay rs += PetscAbsScalar(pc2[j]); 1462b89f182dSHong Zhang } 1463b89f182dSHong Zhang /* U part */ 1464b89f182dSHong Zhang pc2 = b->a + bdiag[i + 2] + 1; 14650e7a5c2bSHong Zhang pj = b->j + bdiag[i + 2] + 1; 14660e7a5c2bSHong Zhang nz = bdiag[i + 1] - bdiag[i + 2] - 1; /* exclude diagonal */ 1467b89f182dSHong Zhang for (j = 0; j < nz; j++) { 1468b89f182dSHong Zhang col = pj[j]; 14699371c9d4SSatish Balay pc2[j] = rtmp2[col]; 14709371c9d4SSatish Balay rs += PetscAbsScalar(pc2[j]); 1471b89f182dSHong Zhang } 1472b89f182dSHong Zhang 147328f1b45aSHong Zhang sctx.rs = rs; 1474b89f182dSHong Zhang sctx.pv = rtmp2[i + 1]; 14759566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i + 1)); 147607b50cabSHong Zhang if (sctx.newshift) break; 147728f1b45aSHong Zhang pc2 = b->a + bdiag[i + 1]; 1478b89f182dSHong Zhang *pc2 = 1.0 / sctx.pv; 147928f1b45aSHong Zhang break; 1480b89f182dSHong Zhang 148168785679SHong Zhang case 3: 148268785679SHong Zhang /* zero rtmp */ 148368785679SHong Zhang /* L part */ 148468785679SHong Zhang nz = bi[i + 1] - bi[i]; 148568785679SHong Zhang bjtmp = bj + bi[i]; 148668785679SHong Zhang for (j = 0; j < nz; j++) { 148768785679SHong Zhang col = bjtmp[j]; 14889371c9d4SSatish Balay rtmp1[col] = 0.0; 14899371c9d4SSatish Balay rtmp2[col] = 0.0; 14909371c9d4SSatish Balay rtmp3[col] = 0.0; 149168785679SHong Zhang } 149268785679SHong Zhang 149368785679SHong Zhang /* U part */ 149468785679SHong Zhang nz = bdiag[i] - bdiag[i + 1]; 149568785679SHong Zhang bjtmp = bj + bdiag[i + 1] + 1; 149668785679SHong Zhang for (j = 0; j < nz; j++) { 149768785679SHong Zhang col = bjtmp[j]; 14989371c9d4SSatish Balay rtmp1[col] = 0.0; 14999371c9d4SSatish Balay rtmp2[col] = 0.0; 15009371c9d4SSatish Balay rtmp3[col] = 0.0; 150168785679SHong Zhang } 150268785679SHong Zhang 150368785679SHong Zhang /* load in initial (unfactored row) */ 150468785679SHong Zhang nz = ai[r[i] + 1] - ai[r[i]]; 150568785679SHong Zhang ajtmp = aj + ai[r[i]]; 15069371c9d4SSatish Balay v1 = aa + ai[r[i]]; 15079371c9d4SSatish Balay v2 = aa + ai[r[i] + 1]; 15089371c9d4SSatish Balay v3 = aa + ai[r[i] + 2]; 150968785679SHong Zhang for (j = 0; j < nz; j++) { 151068785679SHong Zhang col = ics[ajtmp[j]]; 15119371c9d4SSatish Balay rtmp1[col] = v1[j]; 15129371c9d4SSatish Balay rtmp2[col] = v2[j]; 15139371c9d4SSatish Balay rtmp3[col] = v3[j]; 151468785679SHong Zhang } 151568785679SHong Zhang /* ZeropivotApply(): shift the diagonal of the matrix */ 15169371c9d4SSatish Balay rtmp1[i] += sctx.shift_amount; 15179371c9d4SSatish Balay rtmp2[i + 1] += sctx.shift_amount; 15189371c9d4SSatish Balay rtmp3[i + 2] += sctx.shift_amount; 151968785679SHong Zhang 152068785679SHong Zhang /* elimination */ 152168785679SHong Zhang bjtmp = bj + bi[i]; 152268785679SHong Zhang row = *bjtmp++; /* pivot row */ 152368785679SHong Zhang nzL = bi[i + 1] - bi[i]; 152468785679SHong Zhang for (k = 0; k < nzL; k++) { 1525b89f182dSHong Zhang pc1 = rtmp1 + row; 1526b89f182dSHong Zhang pc2 = rtmp2 + row; 1527b89f182dSHong Zhang pc3 = rtmp3 + row; 152868785679SHong Zhang if (*pc1 != 0.0 || *pc2 != 0.0 || *pc3 != 0.0) { 152968785679SHong Zhang pv = b->a + bdiag[row]; 15309371c9d4SSatish Balay mul1 = *pc1 * (*pv); 15319371c9d4SSatish Balay mul2 = *pc2 * (*pv); 15329371c9d4SSatish Balay mul3 = *pc3 * (*pv); 15339371c9d4SSatish Balay *pc1 = mul1; 15349371c9d4SSatish Balay *pc2 = mul2; 15359371c9d4SSatish Balay *pc3 = mul3; 153668785679SHong Zhang 153768785679SHong Zhang pj = b->j + bdiag[row + 1] + 1; /* beginning of U(row,:) */ 153868785679SHong Zhang pv = b->a + bdiag[row + 1] + 1; 153968785679SHong Zhang nz = bdiag[row] - bdiag[row + 1] - 1; /* num of entries in U(row,:) excluding diag */ 154068785679SHong Zhang for (j = 0; j < nz; j++) { 154168785679SHong Zhang col = pj[j]; 1542b89f182dSHong Zhang rtmp1[col] -= mul1 * pv[j]; 1543b89f182dSHong Zhang rtmp2[col] -= mul2 * pv[j]; 1544b89f182dSHong Zhang rtmp3[col] -= mul3 * pv[j]; 154568785679SHong Zhang } 15469566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(3 + 6.0 * nz)); 154768785679SHong Zhang } 154868785679SHong Zhang row = *bjtmp++; 154968785679SHong Zhang } 155068785679SHong Zhang 1551b89f182dSHong Zhang /* finished row i; check zero pivot, then stick row i into b->a */ 1552b89f182dSHong Zhang rs = 0.0; 1553b89f182dSHong Zhang /* L part */ 1554b89f182dSHong Zhang pc1 = b->a + bi[i]; 1555b89f182dSHong Zhang pj = b->j + bi[i]; 1556b89f182dSHong Zhang nz = bi[i + 1] - bi[i]; 1557b89f182dSHong Zhang for (j = 0; j < nz; j++) { 1558b89f182dSHong Zhang col = pj[j]; 15599371c9d4SSatish Balay pc1[j] = rtmp1[col]; 15609371c9d4SSatish Balay rs += PetscAbsScalar(pc1[j]); 1561b89f182dSHong Zhang } 1562b89f182dSHong Zhang /* U part */ 1563b89f182dSHong Zhang pc1 = b->a + bdiag[i + 1] + 1; 1564b89f182dSHong Zhang pj = b->j + bdiag[i + 1] + 1; 15650e7a5c2bSHong Zhang nz = bdiag[i] - bdiag[i + 1] - 1; /* exclude diagonal */ 1566b89f182dSHong Zhang for (j = 0; j < nz; j++) { 1567b89f182dSHong Zhang col = pj[j]; 15689371c9d4SSatish Balay pc1[j] = rtmp1[col]; 15699371c9d4SSatish Balay rs += PetscAbsScalar(pc1[j]); 1570b89f182dSHong Zhang } 157168785679SHong Zhang 1572b89f182dSHong Zhang sctx.rs = rs; 1573b89f182dSHong Zhang sctx.pv = rtmp1[i]; 15749566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i)); 157507b50cabSHong Zhang if (sctx.newshift) break; 1576b89f182dSHong Zhang pc1 = b->a + bdiag[i]; /* Mark diag[i] */ 1577b89f182dSHong Zhang *pc1 = 1.0 / sctx.pv; 1578b89f182dSHong Zhang 1579b89f182dSHong Zhang /* Now take care of 1st column of diagonal 3x3 block. */ 1580b89f182dSHong Zhang pc2 = rtmp2 + i; 1581b89f182dSHong Zhang pc3 = rtmp3 + i; 1582b89f182dSHong Zhang if (*pc2 != 0.0 || *pc3 != 0.0) { 15839371c9d4SSatish Balay mul2 = (*pc2) * (*pc1); 15849371c9d4SSatish Balay *pc2 = mul2; 15859371c9d4SSatish Balay mul3 = (*pc3) * (*pc1); 15869371c9d4SSatish Balay *pc3 = mul3; 158768785679SHong Zhang pj = b->j + bdiag[i + 1] + 1; /* beginning of U(i,:) */ 158868785679SHong Zhang nz = bdiag[i] - bdiag[i + 1] - 1; /* num of entries in U(i,:) excluding diag */ 158968785679SHong Zhang for (j = 0; j < nz; j++) { 159068785679SHong Zhang col = pj[j]; 1591b89f182dSHong Zhang rtmp2[col] -= mul2 * rtmp1[col]; 1592b89f182dSHong Zhang rtmp3[col] -= mul3 * rtmp1[col]; 159368785679SHong Zhang } 15949566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2 + 4.0 * nz)); 159568785679SHong Zhang } 159668785679SHong Zhang 1597b89f182dSHong Zhang /* finished row i+1; check zero pivot, then stick row i+1 into b->a */ 1598b89f182dSHong Zhang rs = 0.0; 1599b89f182dSHong Zhang /* L part */ 1600b89f182dSHong Zhang pc2 = b->a + bi[i + 1]; 1601b89f182dSHong Zhang pj = b->j + bi[i + 1]; 1602b89f182dSHong Zhang nz = bi[i + 2] - bi[i + 1]; 1603b89f182dSHong Zhang for (j = 0; j < nz; j++) { 1604b89f182dSHong Zhang col = pj[j]; 16059371c9d4SSatish Balay pc2[j] = rtmp2[col]; 16069371c9d4SSatish Balay rs += PetscAbsScalar(pc2[j]); 1607b89f182dSHong Zhang } 1608b89f182dSHong Zhang /* U part */ 1609b89f182dSHong Zhang pc2 = b->a + bdiag[i + 2] + 1; 16100e7a5c2bSHong Zhang pj = b->j + bdiag[i + 2] + 1; 16110e7a5c2bSHong Zhang nz = bdiag[i + 1] - bdiag[i + 2] - 1; /* exclude diagonal */ 1612b89f182dSHong Zhang for (j = 0; j < nz; j++) { 1613b89f182dSHong Zhang col = pj[j]; 16149371c9d4SSatish Balay pc2[j] = rtmp2[col]; 16159371c9d4SSatish Balay rs += PetscAbsScalar(pc2[j]); 1616b89f182dSHong Zhang } 1617b89f182dSHong Zhang 1618b89f182dSHong Zhang sctx.rs = rs; 1619b89f182dSHong Zhang sctx.pv = rtmp2[i + 1]; 16209566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i + 1)); 162107b50cabSHong Zhang if (sctx.newshift) break; 1622b89f182dSHong Zhang pc2 = b->a + bdiag[i + 1]; 1623b89f182dSHong Zhang *pc2 = 1.0 / sctx.pv; /* Mark diag[i+1] */ 1624b89f182dSHong Zhang 1625b89f182dSHong Zhang /* Now take care of 2nd column of diagonal 3x3 block. */ 1626b89f182dSHong Zhang pc3 = rtmp3 + i + 1; 162768785679SHong Zhang if (*pc3 != 0.0) { 16289371c9d4SSatish Balay mul3 = (*pc3) * (*pc2); 16299371c9d4SSatish Balay *pc3 = mul3; 163068785679SHong Zhang pj = b->j + bdiag[i + 2] + 1; /* beginning of U(i+1,:) */ 163168785679SHong Zhang nz = bdiag[i + 1] - bdiag[i + 2] - 1; /* num of entries in U(i+1,:) excluding diag */ 163268785679SHong Zhang for (j = 0; j < nz; j++) { 163368785679SHong Zhang col = pj[j]; 1634b89f182dSHong Zhang rtmp3[col] -= mul3 * rtmp2[col]; 163568785679SHong Zhang } 16369566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz)); 163768785679SHong Zhang } 163868785679SHong Zhang 1639b89f182dSHong Zhang /* finished i+2; check zero pivot, then stick row i+2 into b->a */ 164068785679SHong Zhang rs = 0.0; 164168785679SHong Zhang /* L part */ 1642b89f182dSHong Zhang pc3 = b->a + bi[i + 2]; 1643b89f182dSHong Zhang pj = b->j + bi[i + 2]; 1644b89f182dSHong Zhang nz = bi[i + 3] - bi[i + 2]; 164568785679SHong Zhang for (j = 0; j < nz; j++) { 164668785679SHong Zhang col = pj[j]; 16479371c9d4SSatish Balay pc3[j] = rtmp3[col]; 16489371c9d4SSatish Balay rs += PetscAbsScalar(pc3[j]); 164968785679SHong Zhang } 165068785679SHong Zhang /* U part */ 1651b89f182dSHong Zhang pc3 = b->a + bdiag[i + 3] + 1; 16520e7a5c2bSHong Zhang pj = b->j + bdiag[i + 3] + 1; 16530e7a5c2bSHong Zhang nz = bdiag[i + 2] - bdiag[i + 3] - 1; /* exclude diagonal */ 165468785679SHong Zhang for (j = 0; j < nz; j++) { 165568785679SHong Zhang col = pj[j]; 16569371c9d4SSatish Balay pc3[j] = rtmp3[col]; 16579371c9d4SSatish Balay rs += PetscAbsScalar(pc3[j]); 165868785679SHong Zhang } 165968785679SHong Zhang 166068785679SHong Zhang sctx.rs = rs; 1661b89f182dSHong Zhang sctx.pv = rtmp3[i + 2]; 16629566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i + 2)); 166307b50cabSHong Zhang if (sctx.newshift) break; 166468785679SHong Zhang pc3 = b->a + bdiag[i + 2]; 1665b89f182dSHong Zhang *pc3 = 1.0 / sctx.pv; /* Mark diag[i+2] */ 166668785679SHong Zhang break; 16679877982aSShri Abhyankar case 4: 16689877982aSShri Abhyankar /* zero rtmp */ 16699877982aSShri Abhyankar /* L part */ 16709877982aSShri Abhyankar nz = bi[i + 1] - bi[i]; 16719877982aSShri Abhyankar bjtmp = bj + bi[i]; 16729877982aSShri Abhyankar for (j = 0; j < nz; j++) { 16739877982aSShri Abhyankar col = bjtmp[j]; 16749371c9d4SSatish Balay rtmp1[col] = 0.0; 16759371c9d4SSatish Balay rtmp2[col] = 0.0; 16769371c9d4SSatish Balay rtmp3[col] = 0.0; 16779371c9d4SSatish Balay rtmp4[col] = 0.0; 16789877982aSShri Abhyankar } 16799877982aSShri Abhyankar 16809877982aSShri Abhyankar /* U part */ 16819877982aSShri Abhyankar nz = bdiag[i] - bdiag[i + 1]; 16829877982aSShri Abhyankar bjtmp = bj + bdiag[i + 1] + 1; 16839877982aSShri Abhyankar for (j = 0; j < nz; j++) { 16849877982aSShri Abhyankar col = bjtmp[j]; 16859371c9d4SSatish Balay rtmp1[col] = 0.0; 16869371c9d4SSatish Balay rtmp2[col] = 0.0; 16879371c9d4SSatish Balay rtmp3[col] = 0.0; 16889371c9d4SSatish Balay rtmp4[col] = 0.0; 16899877982aSShri Abhyankar } 16909877982aSShri Abhyankar 16919877982aSShri Abhyankar /* load in initial (unfactored row) */ 16929877982aSShri Abhyankar nz = ai[r[i] + 1] - ai[r[i]]; 16939877982aSShri Abhyankar ajtmp = aj + ai[r[i]]; 16949371c9d4SSatish Balay v1 = aa + ai[r[i]]; 16959371c9d4SSatish Balay v2 = aa + ai[r[i] + 1]; 16969371c9d4SSatish Balay v3 = aa + ai[r[i] + 2]; 16979371c9d4SSatish Balay v4 = aa + ai[r[i] + 3]; 16989877982aSShri Abhyankar for (j = 0; j < nz; j++) { 16999877982aSShri Abhyankar col = ics[ajtmp[j]]; 17009371c9d4SSatish Balay rtmp1[col] = v1[j]; 17019371c9d4SSatish Balay rtmp2[col] = v2[j]; 17029371c9d4SSatish Balay rtmp3[col] = v3[j]; 17039371c9d4SSatish Balay rtmp4[col] = v4[j]; 17049877982aSShri Abhyankar } 17059877982aSShri Abhyankar /* ZeropivotApply(): shift the diagonal of the matrix */ 17069371c9d4SSatish Balay rtmp1[i] += sctx.shift_amount; 17079371c9d4SSatish Balay rtmp2[i + 1] += sctx.shift_amount; 17089371c9d4SSatish Balay rtmp3[i + 2] += sctx.shift_amount; 17099371c9d4SSatish Balay rtmp4[i + 3] += sctx.shift_amount; 17109877982aSShri Abhyankar 17119877982aSShri Abhyankar /* elimination */ 17129877982aSShri Abhyankar bjtmp = bj + bi[i]; 17139877982aSShri Abhyankar row = *bjtmp++; /* pivot row */ 17149877982aSShri Abhyankar nzL = bi[i + 1] - bi[i]; 17159877982aSShri Abhyankar for (k = 0; k < nzL; k++) { 17169877982aSShri Abhyankar pc1 = rtmp1 + row; 17179877982aSShri Abhyankar pc2 = rtmp2 + row; 17189877982aSShri Abhyankar pc3 = rtmp3 + row; 17199877982aSShri Abhyankar pc4 = rtmp4 + row; 17209877982aSShri Abhyankar if (*pc1 != 0.0 || *pc2 != 0.0 || *pc3 != 0.0 || *pc4 != 0.0) { 17219877982aSShri Abhyankar pv = b->a + bdiag[row]; 17229371c9d4SSatish Balay mul1 = *pc1 * (*pv); 17239371c9d4SSatish Balay mul2 = *pc2 * (*pv); 17249371c9d4SSatish Balay mul3 = *pc3 * (*pv); 17259371c9d4SSatish Balay mul4 = *pc4 * (*pv); 17269371c9d4SSatish Balay *pc1 = mul1; 17279371c9d4SSatish Balay *pc2 = mul2; 17289371c9d4SSatish Balay *pc3 = mul3; 17299371c9d4SSatish Balay *pc4 = mul4; 17309877982aSShri Abhyankar 17319877982aSShri Abhyankar pj = b->j + bdiag[row + 1] + 1; /* beginning of U(row,:) */ 17329877982aSShri Abhyankar pv = b->a + bdiag[row + 1] + 1; 17339877982aSShri Abhyankar nz = bdiag[row] - bdiag[row + 1] - 1; /* num of entries in U(row,:) excluding diag */ 17349877982aSShri Abhyankar for (j = 0; j < nz; j++) { 17359877982aSShri Abhyankar col = pj[j]; 17369877982aSShri Abhyankar rtmp1[col] -= mul1 * pv[j]; 17379877982aSShri Abhyankar rtmp2[col] -= mul2 * pv[j]; 17389877982aSShri Abhyankar rtmp3[col] -= mul3 * pv[j]; 17399877982aSShri Abhyankar rtmp4[col] -= mul4 * pv[j]; 17409877982aSShri Abhyankar } 17419566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(4 + 8.0 * nz)); 17429877982aSShri Abhyankar } 17439877982aSShri Abhyankar row = *bjtmp++; 17449877982aSShri Abhyankar } 17459877982aSShri Abhyankar 17469877982aSShri Abhyankar /* finished row i; check zero pivot, then stick row i into b->a */ 17479877982aSShri Abhyankar rs = 0.0; 17489877982aSShri Abhyankar /* L part */ 17499877982aSShri Abhyankar pc1 = b->a + bi[i]; 17509877982aSShri Abhyankar pj = b->j + bi[i]; 17519877982aSShri Abhyankar nz = bi[i + 1] - bi[i]; 17529877982aSShri Abhyankar for (j = 0; j < nz; j++) { 17539877982aSShri Abhyankar col = pj[j]; 17549371c9d4SSatish Balay pc1[j] = rtmp1[col]; 17559371c9d4SSatish Balay rs += PetscAbsScalar(pc1[j]); 17569877982aSShri Abhyankar } 17579877982aSShri Abhyankar /* U part */ 17589877982aSShri Abhyankar pc1 = b->a + bdiag[i + 1] + 1; 17599877982aSShri Abhyankar pj = b->j + bdiag[i + 1] + 1; 17609877982aSShri Abhyankar nz = bdiag[i] - bdiag[i + 1] - 1; /* exclude diagonal */ 17619877982aSShri Abhyankar for (j = 0; j < nz; j++) { 17629877982aSShri Abhyankar col = pj[j]; 17639371c9d4SSatish Balay pc1[j] = rtmp1[col]; 17649371c9d4SSatish Balay rs += PetscAbsScalar(pc1[j]); 17659877982aSShri Abhyankar } 17669877982aSShri Abhyankar 17679877982aSShri Abhyankar sctx.rs = rs; 17689877982aSShri Abhyankar sctx.pv = rtmp1[i]; 17699566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i)); 177007b50cabSHong Zhang if (sctx.newshift) break; 17719877982aSShri Abhyankar pc1 = b->a + bdiag[i]; /* Mark diag[i] */ 17729877982aSShri Abhyankar *pc1 = 1.0 / sctx.pv; 17739877982aSShri Abhyankar 17749877982aSShri Abhyankar /* Now take care of 1st column of diagonal 4x4 block. */ 17759877982aSShri Abhyankar pc2 = rtmp2 + i; 17769877982aSShri Abhyankar pc3 = rtmp3 + i; 17779877982aSShri Abhyankar pc4 = rtmp4 + i; 17789877982aSShri Abhyankar if (*pc2 != 0.0 || *pc3 != 0.0 || *pc4 != 0.0) { 17799371c9d4SSatish Balay mul2 = (*pc2) * (*pc1); 17809371c9d4SSatish Balay *pc2 = mul2; 17819371c9d4SSatish Balay mul3 = (*pc3) * (*pc1); 17829371c9d4SSatish Balay *pc3 = mul3; 17839371c9d4SSatish Balay mul4 = (*pc4) * (*pc1); 17849371c9d4SSatish Balay *pc4 = mul4; 17859877982aSShri Abhyankar pj = b->j + bdiag[i + 1] + 1; /* beginning of U(i,:) */ 17869877982aSShri Abhyankar nz = bdiag[i] - bdiag[i + 1] - 1; /* num of entries in U(i,:) excluding diag */ 17879877982aSShri Abhyankar for (j = 0; j < nz; j++) { 17889877982aSShri Abhyankar col = pj[j]; 17899877982aSShri Abhyankar rtmp2[col] -= mul2 * rtmp1[col]; 17909877982aSShri Abhyankar rtmp3[col] -= mul3 * rtmp1[col]; 17919877982aSShri Abhyankar rtmp4[col] -= mul4 * rtmp1[col]; 17929877982aSShri Abhyankar } 17939566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(3 + 6.0 * nz)); 17949877982aSShri Abhyankar } 17959877982aSShri Abhyankar 17969877982aSShri Abhyankar /* finished row i+1; check zero pivot, then stick row i+1 into b->a */ 17979877982aSShri Abhyankar rs = 0.0; 17989877982aSShri Abhyankar /* L part */ 17999877982aSShri Abhyankar pc2 = b->a + bi[i + 1]; 18009877982aSShri Abhyankar pj = b->j + bi[i + 1]; 18019877982aSShri Abhyankar nz = bi[i + 2] - bi[i + 1]; 18029877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18039877982aSShri Abhyankar col = pj[j]; 18049371c9d4SSatish Balay pc2[j] = rtmp2[col]; 18059371c9d4SSatish Balay rs += PetscAbsScalar(pc2[j]); 18069877982aSShri Abhyankar } 18079877982aSShri Abhyankar /* U part */ 18089877982aSShri Abhyankar pc2 = b->a + bdiag[i + 2] + 1; 18099877982aSShri Abhyankar pj = b->j + bdiag[i + 2] + 1; 18109877982aSShri Abhyankar nz = bdiag[i + 1] - bdiag[i + 2] - 1; /* exclude diagonal */ 18119877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18129877982aSShri Abhyankar col = pj[j]; 18139371c9d4SSatish Balay pc2[j] = rtmp2[col]; 18149371c9d4SSatish Balay rs += PetscAbsScalar(pc2[j]); 18159877982aSShri Abhyankar } 18169877982aSShri Abhyankar 18179877982aSShri Abhyankar sctx.rs = rs; 18189877982aSShri Abhyankar sctx.pv = rtmp2[i + 1]; 18199566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i + 1)); 182007b50cabSHong Zhang if (sctx.newshift) break; 18219877982aSShri Abhyankar pc2 = b->a + bdiag[i + 1]; 18229877982aSShri Abhyankar *pc2 = 1.0 / sctx.pv; /* Mark diag[i+1] */ 18239877982aSShri Abhyankar 18249877982aSShri Abhyankar /* Now take care of 2nd column of diagonal 4x4 block. */ 18259877982aSShri Abhyankar pc3 = rtmp3 + i + 1; 18269877982aSShri Abhyankar pc4 = rtmp4 + i + 1; 18279877982aSShri Abhyankar if (*pc3 != 0.0 || *pc4 != 0.0) { 18289371c9d4SSatish Balay mul3 = (*pc3) * (*pc2); 18299371c9d4SSatish Balay *pc3 = mul3; 18309371c9d4SSatish Balay mul4 = (*pc4) * (*pc2); 18319371c9d4SSatish Balay *pc4 = mul4; 18329877982aSShri Abhyankar pj = b->j + bdiag[i + 2] + 1; /* beginning of U(i+1,:) */ 18339877982aSShri Abhyankar nz = bdiag[i + 1] - bdiag[i + 2] - 1; /* num of entries in U(i+1,:) excluding diag */ 18349877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18359877982aSShri Abhyankar col = pj[j]; 18369877982aSShri Abhyankar rtmp3[col] -= mul3 * rtmp2[col]; 18379877982aSShri Abhyankar rtmp4[col] -= mul4 * rtmp2[col]; 18389877982aSShri Abhyankar } 18399566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(4.0 * nz)); 18409877982aSShri Abhyankar } 18419877982aSShri Abhyankar 18429877982aSShri Abhyankar /* finished i+2; check zero pivot, then stick row i+2 into b->a */ 18439877982aSShri Abhyankar rs = 0.0; 18449877982aSShri Abhyankar /* L part */ 18459877982aSShri Abhyankar pc3 = b->a + bi[i + 2]; 18469877982aSShri Abhyankar pj = b->j + bi[i + 2]; 18479877982aSShri Abhyankar nz = bi[i + 3] - bi[i + 2]; 18489877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18499877982aSShri Abhyankar col = pj[j]; 18509371c9d4SSatish Balay pc3[j] = rtmp3[col]; 18519371c9d4SSatish Balay rs += PetscAbsScalar(pc3[j]); 18529877982aSShri Abhyankar } 18539877982aSShri Abhyankar /* U part */ 18549877982aSShri Abhyankar pc3 = b->a + bdiag[i + 3] + 1; 18559877982aSShri Abhyankar pj = b->j + bdiag[i + 3] + 1; 18569877982aSShri Abhyankar nz = bdiag[i + 2] - bdiag[i + 3] - 1; /* exclude diagonal */ 18579877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18589877982aSShri Abhyankar col = pj[j]; 18599371c9d4SSatish Balay pc3[j] = rtmp3[col]; 18609371c9d4SSatish Balay rs += PetscAbsScalar(pc3[j]); 18619877982aSShri Abhyankar } 18629877982aSShri Abhyankar 18639877982aSShri Abhyankar sctx.rs = rs; 18649877982aSShri Abhyankar sctx.pv = rtmp3[i + 2]; 18659566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i + 2)); 186607b50cabSHong Zhang if (sctx.newshift) break; 18679877982aSShri Abhyankar pc3 = b->a + bdiag[i + 2]; 18689877982aSShri Abhyankar *pc3 = 1.0 / sctx.pv; /* Mark diag[i+2] */ 18699877982aSShri Abhyankar 18709877982aSShri Abhyankar /* Now take care of 3rd column of diagonal 4x4 block. */ 18719877982aSShri Abhyankar pc4 = rtmp4 + i + 2; 18729877982aSShri Abhyankar if (*pc4 != 0.0) { 18739371c9d4SSatish Balay mul4 = (*pc4) * (*pc3); 18749371c9d4SSatish Balay *pc4 = mul4; 18759877982aSShri Abhyankar pj = b->j + bdiag[i + 3] + 1; /* beginning of U(i+2,:) */ 18769877982aSShri Abhyankar nz = bdiag[i + 2] - bdiag[i + 3] - 1; /* num of entries in U(i+2,:) excluding diag */ 18779877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18789877982aSShri Abhyankar col = pj[j]; 18799877982aSShri Abhyankar rtmp4[col] -= mul4 * rtmp3[col]; 18809877982aSShri Abhyankar } 18819566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz)); 18829877982aSShri Abhyankar } 18839877982aSShri Abhyankar 18849877982aSShri Abhyankar /* finished i+3; check zero pivot, then stick row i+3 into b->a */ 18859877982aSShri Abhyankar rs = 0.0; 18869877982aSShri Abhyankar /* L part */ 18879877982aSShri Abhyankar pc4 = b->a + bi[i + 3]; 18889877982aSShri Abhyankar pj = b->j + bi[i + 3]; 18899877982aSShri Abhyankar nz = bi[i + 4] - bi[i + 3]; 18909877982aSShri Abhyankar for (j = 0; j < nz; j++) { 18919877982aSShri Abhyankar col = pj[j]; 18929371c9d4SSatish Balay pc4[j] = rtmp4[col]; 18939371c9d4SSatish Balay rs += PetscAbsScalar(pc4[j]); 18949877982aSShri Abhyankar } 18959877982aSShri Abhyankar /* U part */ 18969877982aSShri Abhyankar pc4 = b->a + bdiag[i + 4] + 1; 18979877982aSShri Abhyankar pj = b->j + bdiag[i + 4] + 1; 18989877982aSShri Abhyankar nz = bdiag[i + 3] - bdiag[i + 4] - 1; /* exclude diagonal */ 18999877982aSShri Abhyankar for (j = 0; j < nz; j++) { 19009877982aSShri Abhyankar col = pj[j]; 19019371c9d4SSatish Balay pc4[j] = rtmp4[col]; 19029371c9d4SSatish Balay rs += PetscAbsScalar(pc4[j]); 19039877982aSShri Abhyankar } 19049877982aSShri Abhyankar 19059877982aSShri Abhyankar sctx.rs = rs; 19069877982aSShri Abhyankar sctx.pv = rtmp4[i + 3]; 19079566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, i + 3)); 190807b50cabSHong Zhang if (sctx.newshift) break; 19099877982aSShri Abhyankar pc4 = b->a + bdiag[i + 3]; 19109877982aSShri Abhyankar *pc4 = 1.0 / sctx.pv; /* Mark diag[i+3] */ 19119877982aSShri Abhyankar break; 191268785679SHong Zhang 1913d71ae5a4SJacob Faibussowitsch default: 1914d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Node size not yet supported "); 191528f1b45aSHong Zhang } 1916c2b86aeeSHong Zhang if (sctx.newshift) break; /* break for (inod=0,i=0; inod<node_max; inod++) */ 191728f1b45aSHong Zhang i += nodesz; /* Update the row */ 191868785679SHong Zhang } 191928f1b45aSHong Zhang 192028f1b45aSHong Zhang /* MatPivotRefine() */ 192107b50cabSHong Zhang if (info->shifttype == (PetscReal)MAT_SHIFT_POSITIVE_DEFINITE && !sctx.newshift && sctx.shift_fraction > 0 && sctx.nshift < sctx.nshift_max) { 192228f1b45aSHong Zhang /* 192328f1b45aSHong Zhang * if no shift in this attempt & shifting & started shifting & can refine, 192428f1b45aSHong Zhang * then try lower shift 192528f1b45aSHong Zhang */ 192628f1b45aSHong Zhang sctx.shift_hi = sctx.shift_fraction; 192728f1b45aSHong Zhang sctx.shift_fraction = (sctx.shift_hi + sctx.shift_lo) / 2.; 192828f1b45aSHong Zhang sctx.shift_amount = sctx.shift_fraction * sctx.shift_top; 192907b50cabSHong Zhang sctx.newshift = PETSC_TRUE; 193028f1b45aSHong Zhang sctx.nshift++; 193128f1b45aSHong Zhang } 193207b50cabSHong Zhang } while (sctx.newshift); 193328f1b45aSHong Zhang 19349566063dSJacob Faibussowitsch PetscCall(PetscFree4(rtmp1, rtmp2, rtmp3, rtmp4)); 19359566063dSJacob Faibussowitsch PetscCall(PetscFree(tmp_vec2)); 19369566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isicol, &ic)); 19379566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &r)); 193828f1b45aSHong Zhang 1939abb87a52SBarry Smith if (b->inode.size) { 1940abb87a52SBarry Smith C->ops->solve = MatSolve_SeqAIJ_Inode; 1941abb87a52SBarry Smith } else { 1942d3ac4fa3SBarry Smith C->ops->solve = MatSolve_SeqAIJ; 1943abb87a52SBarry Smith } 194428f1b45aSHong Zhang C->ops->solveadd = MatSolveAdd_SeqAIJ; 194528f1b45aSHong Zhang C->ops->solvetranspose = MatSolveTranspose_SeqAIJ; 194628f1b45aSHong Zhang C->ops->solvetransposeadd = MatSolveTransposeAdd_SeqAIJ; 194728f1b45aSHong Zhang C->ops->matsolve = MatMatSolve_SeqAIJ; 194828f1b45aSHong Zhang C->assembled = PETSC_TRUE; 194928f1b45aSHong Zhang C->preallocated = PETSC_TRUE; 19502205254eSKarl Rupp 19519566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(C->cmap->n)); 195228f1b45aSHong Zhang 195328f1b45aSHong Zhang /* MatShiftView(A,info,&sctx) */ 195428f1b45aSHong Zhang if (sctx.nshift) { 1955f4db908eSBarry Smith if (info->shifttype == (PetscReal)MAT_SHIFT_POSITIVE_DEFINITE) { 19569566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "number of shift_pd tries %" PetscInt_FMT ", shift_amount %g, diagonal shifted up by %e fraction top_value %e\n", sctx.nshift, (double)sctx.shift_amount, (double)sctx.shift_fraction, (double)sctx.shift_top)); 1957f4db908eSBarry Smith } else if (info->shifttype == (PetscReal)MAT_SHIFT_NONZERO) { 19589566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "number of shift_nz tries %" PetscInt_FMT ", shift_amount %g\n", sctx.nshift, (double)sctx.shift_amount)); 1959f4db908eSBarry Smith } else if (info->shifttype == (PetscReal)MAT_SHIFT_INBLOCKS) { 19609566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "number of shift_inblocks applied %" PetscInt_FMT ", each shift_amount %g\n", sctx.nshift, (double)info->shiftamount)); 196128f1b45aSHong Zhang } 196228f1b45aSHong Zhang } 19633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 196428f1b45aSHong Zhang } 1965628f99d7SShri Abhyankar 1966ff6a9541SJacob Faibussowitsch #if 0 1967ff6a9541SJacob Faibussowitsch // unused 1968ff6a9541SJacob Faibussowitsch static PetscErrorCode MatLUFactorNumeric_SeqAIJ_Inode_inplace(Mat B, Mat A, const MatFactorInfo *info) 1969d71ae5a4SJacob Faibussowitsch { 1970628f99d7SShri Abhyankar Mat C = B; 1971628f99d7SShri Abhyankar Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data, *b = (Mat_SeqAIJ *)C->data; 1972628f99d7SShri Abhyankar IS iscol = b->col, isrow = b->row, isicol = b->icol; 1973628f99d7SShri Abhyankar const PetscInt *r, *ic, *c, *ics; 1974628f99d7SShri Abhyankar PetscInt n = A->rmap->n, *bi = b->i; 1975628f99d7SShri Abhyankar PetscInt *bj = b->j, *nbj = b->j + 1, *ajtmp, *bjtmp, nz, nz_tmp, row, prow; 19768758e1faSBarry Smith PetscInt i, j, idx, *bd = b->diag, node_max, nodesz; 19778758e1faSBarry Smith PetscInt *ai = a->i, *aj = a->j; 1978628f99d7SShri Abhyankar PetscInt *ns, *tmp_vec1, *tmp_vec2, *nsmap, *pj; 1979628f99d7SShri Abhyankar PetscScalar mul1, mul2, mul3, tmp; 1980628f99d7SShri Abhyankar MatScalar *pc1, *pc2, *pc3, *ba = b->a, *pv, *rtmp11, *rtmp22, *rtmp33; 1981628f99d7SShri Abhyankar const MatScalar *v1, *v2, *v3, *aa = a->a, *rtmp1; 1982628f99d7SShri Abhyankar PetscReal rs = 0.0; 1983628f99d7SShri Abhyankar FactorShiftCtx sctx; 1984628f99d7SShri Abhyankar 1985628f99d7SShri Abhyankar PetscFunctionBegin; 1986628f99d7SShri Abhyankar sctx.shift_top = 0; 1987628f99d7SShri Abhyankar sctx.nshift_max = 0; 1988628f99d7SShri Abhyankar sctx.shift_lo = 0; 1989628f99d7SShri Abhyankar sctx.shift_hi = 0; 1990628f99d7SShri Abhyankar sctx.shift_fraction = 0; 1991628f99d7SShri Abhyankar 1992628f99d7SShri Abhyankar /* if both shift schemes are chosen by user, only use info->shiftpd */ 1993f4db908eSBarry Smith if (info->shifttype == (PetscReal)MAT_SHIFT_POSITIVE_DEFINITE) { /* set sctx.shift_top=max{rs} */ 1994628f99d7SShri Abhyankar sctx.shift_top = 0; 1995628f99d7SShri Abhyankar for (i = 0; i < n; i++) { 1996628f99d7SShri Abhyankar /* calculate rs = sum(|aij|)-RealPart(aii), amt of shift needed for this row */ 1997628f99d7SShri Abhyankar rs = 0.0; 1998628f99d7SShri Abhyankar ajtmp = aj + ai[i]; 1999628f99d7SShri Abhyankar rtmp1 = aa + ai[i]; 2000628f99d7SShri Abhyankar nz = ai[i + 1] - ai[i]; 2001628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2002628f99d7SShri Abhyankar if (*ajtmp != i) { 2003628f99d7SShri Abhyankar rs += PetscAbsScalar(*rtmp1++); 2004628f99d7SShri Abhyankar } else { 2005628f99d7SShri Abhyankar rs -= PetscRealPart(*rtmp1++); 2006628f99d7SShri Abhyankar } 2007628f99d7SShri Abhyankar ajtmp++; 2008628f99d7SShri Abhyankar } 2009628f99d7SShri Abhyankar if (rs > sctx.shift_top) sctx.shift_top = rs; 2010628f99d7SShri Abhyankar } 2011628f99d7SShri Abhyankar if (sctx.shift_top == 0.0) sctx.shift_top += 1.e-12; 2012628f99d7SShri Abhyankar sctx.shift_top *= 1.1; 2013628f99d7SShri Abhyankar sctx.nshift_max = 5; 2014628f99d7SShri Abhyankar sctx.shift_lo = 0.; 2015628f99d7SShri Abhyankar sctx.shift_hi = 1.; 2016628f99d7SShri Abhyankar } 2017628f99d7SShri Abhyankar sctx.shift_amount = 0; 2018628f99d7SShri Abhyankar sctx.nshift = 0; 2019628f99d7SShri Abhyankar 20209566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &r)); 20219566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol, &c)); 20229566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isicol, &ic)); 20239566063dSJacob Faibussowitsch PetscCall(PetscCalloc3(n, &rtmp11, n, &rtmp22, n, &rtmp33)); 2024628f99d7SShri Abhyankar ics = ic; 2025628f99d7SShri Abhyankar 2026628f99d7SShri Abhyankar node_max = a->inode.node_count; 2027628f99d7SShri Abhyankar ns = a->inode.size; 202828b400f6SJacob Faibussowitsch PetscCheck(ns, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Matrix without inode information"); 2029628f99d7SShri Abhyankar 2030628f99d7SShri Abhyankar /* If max inode size > 3, split it into two inodes.*/ 2031628f99d7SShri Abhyankar /* also map the inode sizes according to the ordering */ 20329566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n + 1, &tmp_vec1)); 2033628f99d7SShri Abhyankar for (i = 0, j = 0; i < node_max; ++i, ++j) { 2034628f99d7SShri Abhyankar if (ns[i] > 3) { 2035628f99d7SShri Abhyankar tmp_vec1[j] = ns[i] / 2; /* Assuming ns[i] < =5 */ 2036628f99d7SShri Abhyankar ++j; 2037628f99d7SShri Abhyankar tmp_vec1[j] = ns[i] - tmp_vec1[j - 1]; 2038628f99d7SShri Abhyankar } else { 2039628f99d7SShri Abhyankar tmp_vec1[j] = ns[i]; 2040628f99d7SShri Abhyankar } 2041628f99d7SShri Abhyankar } 2042628f99d7SShri Abhyankar /* Use the correct node_max */ 2043628f99d7SShri Abhyankar node_max = j; 2044628f99d7SShri Abhyankar 2045628f99d7SShri Abhyankar /* Now reorder the inode info based on mat re-ordering info */ 2046628f99d7SShri Abhyankar /* First create a row -> inode_size_array_index map */ 20479566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(n + 1, &nsmap, node_max + 1, &tmp_vec2)); 2048628f99d7SShri Abhyankar for (i = 0, row = 0; i < node_max; i++) { 2049628f99d7SShri Abhyankar nodesz = tmp_vec1[i]; 2050ad540459SPierre Jolivet for (j = 0; j < nodesz; j++, row++) nsmap[row] = i; 2051628f99d7SShri Abhyankar } 2052628f99d7SShri Abhyankar /* Using nsmap, create a reordered ns structure */ 2053628f99d7SShri Abhyankar for (i = 0, j = 0; i < node_max; i++) { 2054628f99d7SShri Abhyankar nodesz = tmp_vec1[nsmap[r[j]]]; /* here the reordered row_no is in r[] */ 2055628f99d7SShri Abhyankar tmp_vec2[i] = nodesz; 2056628f99d7SShri Abhyankar j += nodesz; 2057628f99d7SShri Abhyankar } 20589566063dSJacob Faibussowitsch PetscCall(PetscFree2(nsmap, tmp_vec1)); 2059628f99d7SShri Abhyankar /* Now use the correct ns */ 2060628f99d7SShri Abhyankar ns = tmp_vec2; 2061628f99d7SShri Abhyankar 2062628f99d7SShri Abhyankar do { 206307b50cabSHong Zhang sctx.newshift = PETSC_FALSE; 2064628f99d7SShri Abhyankar /* Now loop over each block-row, and do the factorization */ 2065628f99d7SShri Abhyankar for (i = 0, row = 0; i < node_max; i++) { 2066628f99d7SShri Abhyankar nodesz = ns[i]; 2067628f99d7SShri Abhyankar nz = bi[row + 1] - bi[row]; 2068628f99d7SShri Abhyankar bjtmp = bj + bi[row]; 2069628f99d7SShri Abhyankar 2070628f99d7SShri Abhyankar switch (nodesz) { 2071628f99d7SShri Abhyankar case 1: 2072628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2073628f99d7SShri Abhyankar idx = bjtmp[j]; 2074628f99d7SShri Abhyankar rtmp11[idx] = 0.0; 2075628f99d7SShri Abhyankar } 2076628f99d7SShri Abhyankar 2077628f99d7SShri Abhyankar /* load in initial (unfactored row) */ 2078628f99d7SShri Abhyankar idx = r[row]; 2079628f99d7SShri Abhyankar nz_tmp = ai[idx + 1] - ai[idx]; 2080628f99d7SShri Abhyankar ajtmp = aj + ai[idx]; 2081628f99d7SShri Abhyankar v1 = aa + ai[idx]; 2082628f99d7SShri Abhyankar 2083628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2084628f99d7SShri Abhyankar idx = ics[ajtmp[j]]; 2085628f99d7SShri Abhyankar rtmp11[idx] = v1[j]; 2086628f99d7SShri Abhyankar } 2087628f99d7SShri Abhyankar rtmp11[ics[r[row]]] += sctx.shift_amount; 2088628f99d7SShri Abhyankar 2089628f99d7SShri Abhyankar prow = *bjtmp++; 2090628f99d7SShri Abhyankar while (prow < row) { 2091628f99d7SShri Abhyankar pc1 = rtmp11 + prow; 2092628f99d7SShri Abhyankar if (*pc1 != 0.0) { 2093628f99d7SShri Abhyankar pv = ba + bd[prow]; 2094628f99d7SShri Abhyankar pj = nbj + bd[prow]; 2095628f99d7SShri Abhyankar mul1 = *pc1 * *pv++; 2096628f99d7SShri Abhyankar *pc1 = mul1; 2097628f99d7SShri Abhyankar nz_tmp = bi[prow + 1] - bd[prow] - 1; 20989566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz_tmp)); 2099628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2100628f99d7SShri Abhyankar tmp = pv[j]; 2101628f99d7SShri Abhyankar idx = pj[j]; 2102628f99d7SShri Abhyankar rtmp11[idx] -= mul1 * tmp; 2103628f99d7SShri Abhyankar } 2104628f99d7SShri Abhyankar } 2105628f99d7SShri Abhyankar prow = *bjtmp++; 2106628f99d7SShri Abhyankar } 2107628f99d7SShri Abhyankar pj = bj + bi[row]; 2108628f99d7SShri Abhyankar pc1 = ba + bi[row]; 2109628f99d7SShri Abhyankar 2110628f99d7SShri Abhyankar sctx.pv = rtmp11[row]; 2111628f99d7SShri Abhyankar rtmp11[row] = 1.0 / rtmp11[row]; /* invert diag */ 2112628f99d7SShri Abhyankar rs = 0.0; 2113628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2114628f99d7SShri Abhyankar idx = pj[j]; 2115628f99d7SShri Abhyankar pc1[j] = rtmp11[idx]; /* rtmp11 -> ba */ 2116628f99d7SShri Abhyankar if (idx != row) rs += PetscAbsScalar(pc1[j]); 2117628f99d7SShri Abhyankar } 2118628f99d7SShri Abhyankar sctx.rs = rs; 21199566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, row)); 212007b50cabSHong Zhang if (sctx.newshift) goto endofwhile; 2121628f99d7SShri Abhyankar break; 2122628f99d7SShri Abhyankar 2123628f99d7SShri Abhyankar case 2: 2124628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2125628f99d7SShri Abhyankar idx = bjtmp[j]; 2126628f99d7SShri Abhyankar rtmp11[idx] = 0.0; 2127628f99d7SShri Abhyankar rtmp22[idx] = 0.0; 2128628f99d7SShri Abhyankar } 2129628f99d7SShri Abhyankar 2130628f99d7SShri Abhyankar /* load in initial (unfactored row) */ 2131628f99d7SShri Abhyankar idx = r[row]; 2132628f99d7SShri Abhyankar nz_tmp = ai[idx + 1] - ai[idx]; 2133628f99d7SShri Abhyankar ajtmp = aj + ai[idx]; 2134628f99d7SShri Abhyankar v1 = aa + ai[idx]; 2135628f99d7SShri Abhyankar v2 = aa + ai[idx + 1]; 2136628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2137628f99d7SShri Abhyankar idx = ics[ajtmp[j]]; 2138628f99d7SShri Abhyankar rtmp11[idx] = v1[j]; 2139628f99d7SShri Abhyankar rtmp22[idx] = v2[j]; 2140628f99d7SShri Abhyankar } 2141628f99d7SShri Abhyankar rtmp11[ics[r[row]]] += sctx.shift_amount; 2142628f99d7SShri Abhyankar rtmp22[ics[r[row + 1]]] += sctx.shift_amount; 2143628f99d7SShri Abhyankar 2144628f99d7SShri Abhyankar prow = *bjtmp++; 2145628f99d7SShri Abhyankar while (prow < row) { 2146628f99d7SShri Abhyankar pc1 = rtmp11 + prow; 2147628f99d7SShri Abhyankar pc2 = rtmp22 + prow; 2148628f99d7SShri Abhyankar if (*pc1 != 0.0 || *pc2 != 0.0) { 2149628f99d7SShri Abhyankar pv = ba + bd[prow]; 2150628f99d7SShri Abhyankar pj = nbj + bd[prow]; 2151628f99d7SShri Abhyankar mul1 = *pc1 * *pv; 2152628f99d7SShri Abhyankar mul2 = *pc2 * *pv; 2153628f99d7SShri Abhyankar ++pv; 2154628f99d7SShri Abhyankar *pc1 = mul1; 2155628f99d7SShri Abhyankar *pc2 = mul2; 2156628f99d7SShri Abhyankar 2157628f99d7SShri Abhyankar nz_tmp = bi[prow + 1] - bd[prow] - 1; 2158628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2159628f99d7SShri Abhyankar tmp = pv[j]; 2160628f99d7SShri Abhyankar idx = pj[j]; 2161628f99d7SShri Abhyankar rtmp11[idx] -= mul1 * tmp; 2162628f99d7SShri Abhyankar rtmp22[idx] -= mul2 * tmp; 2163628f99d7SShri Abhyankar } 21649566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2 + 4.0 * nz_tmp)); 2165628f99d7SShri Abhyankar } 2166628f99d7SShri Abhyankar prow = *bjtmp++; 2167628f99d7SShri Abhyankar } 2168628f99d7SShri Abhyankar 2169628f99d7SShri Abhyankar /* Now take care of diagonal 2x2 block. Note: prow = row here */ 2170628f99d7SShri Abhyankar pc1 = rtmp11 + prow; 2171628f99d7SShri Abhyankar pc2 = rtmp22 + prow; 2172628f99d7SShri Abhyankar 2173628f99d7SShri Abhyankar sctx.pv = *pc1; 2174628f99d7SShri Abhyankar pj = bj + bi[prow]; 2175628f99d7SShri Abhyankar rs = 0.0; 2176628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2177628f99d7SShri Abhyankar idx = pj[j]; 2178628f99d7SShri Abhyankar if (idx != prow) rs += PetscAbsScalar(rtmp11[idx]); 2179628f99d7SShri Abhyankar } 2180628f99d7SShri Abhyankar sctx.rs = rs; 21819566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, row)); 218207b50cabSHong Zhang if (sctx.newshift) goto endofwhile; 2183628f99d7SShri Abhyankar 2184628f99d7SShri Abhyankar if (*pc2 != 0.0) { 2185628f99d7SShri Abhyankar pj = nbj + bd[prow]; 2186628f99d7SShri Abhyankar mul2 = (*pc2) / (*pc1); /* since diag is not yet inverted.*/ 2187628f99d7SShri Abhyankar *pc2 = mul2; 2188628f99d7SShri Abhyankar nz_tmp = bi[prow + 1] - bd[prow] - 1; 2189628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2190628f99d7SShri Abhyankar idx = pj[j]; 2191628f99d7SShri Abhyankar tmp = rtmp11[idx]; 2192628f99d7SShri Abhyankar rtmp22[idx] -= mul2 * tmp; 2193628f99d7SShri Abhyankar } 21949566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz_tmp)); 2195628f99d7SShri Abhyankar } 2196628f99d7SShri Abhyankar 2197628f99d7SShri Abhyankar pj = bj + bi[row]; 2198628f99d7SShri Abhyankar pc1 = ba + bi[row]; 2199628f99d7SShri Abhyankar pc2 = ba + bi[row + 1]; 2200628f99d7SShri Abhyankar 2201628f99d7SShri Abhyankar sctx.pv = rtmp22[row + 1]; 2202628f99d7SShri Abhyankar rs = 0.0; 2203628f99d7SShri Abhyankar rtmp11[row] = 1.0 / rtmp11[row]; 2204628f99d7SShri Abhyankar rtmp22[row + 1] = 1.0 / rtmp22[row + 1]; 2205628f99d7SShri Abhyankar /* copy row entries from dense representation to sparse */ 2206628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2207628f99d7SShri Abhyankar idx = pj[j]; 2208628f99d7SShri Abhyankar pc1[j] = rtmp11[idx]; 2209628f99d7SShri Abhyankar pc2[j] = rtmp22[idx]; 2210628f99d7SShri Abhyankar if (idx != row + 1) rs += PetscAbsScalar(pc2[j]); 2211628f99d7SShri Abhyankar } 2212628f99d7SShri Abhyankar sctx.rs = rs; 22139566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, row + 1)); 221407b50cabSHong Zhang if (sctx.newshift) goto endofwhile; 2215628f99d7SShri Abhyankar break; 2216628f99d7SShri Abhyankar 2217628f99d7SShri Abhyankar case 3: 2218628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2219628f99d7SShri Abhyankar idx = bjtmp[j]; 2220628f99d7SShri Abhyankar rtmp11[idx] = 0.0; 2221628f99d7SShri Abhyankar rtmp22[idx] = 0.0; 2222628f99d7SShri Abhyankar rtmp33[idx] = 0.0; 2223628f99d7SShri Abhyankar } 2224628f99d7SShri Abhyankar /* copy the nonzeros for the 3 rows from sparse representation to dense in rtmp*[] */ 2225628f99d7SShri Abhyankar idx = r[row]; 2226628f99d7SShri Abhyankar nz_tmp = ai[idx + 1] - ai[idx]; 2227628f99d7SShri Abhyankar ajtmp = aj + ai[idx]; 2228628f99d7SShri Abhyankar v1 = aa + ai[idx]; 2229628f99d7SShri Abhyankar v2 = aa + ai[idx + 1]; 2230628f99d7SShri Abhyankar v3 = aa + ai[idx + 2]; 2231628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2232628f99d7SShri Abhyankar idx = ics[ajtmp[j]]; 2233628f99d7SShri Abhyankar rtmp11[idx] = v1[j]; 2234628f99d7SShri Abhyankar rtmp22[idx] = v2[j]; 2235628f99d7SShri Abhyankar rtmp33[idx] = v3[j]; 2236628f99d7SShri Abhyankar } 2237628f99d7SShri Abhyankar rtmp11[ics[r[row]]] += sctx.shift_amount; 2238628f99d7SShri Abhyankar rtmp22[ics[r[row + 1]]] += sctx.shift_amount; 2239628f99d7SShri Abhyankar rtmp33[ics[r[row + 2]]] += sctx.shift_amount; 2240628f99d7SShri Abhyankar 2241628f99d7SShri Abhyankar /* loop over all pivot row blocks above this row block */ 2242628f99d7SShri Abhyankar prow = *bjtmp++; 2243628f99d7SShri Abhyankar while (prow < row) { 2244628f99d7SShri Abhyankar pc1 = rtmp11 + prow; 2245628f99d7SShri Abhyankar pc2 = rtmp22 + prow; 2246628f99d7SShri Abhyankar pc3 = rtmp33 + prow; 2247628f99d7SShri Abhyankar if (*pc1 != 0.0 || *pc2 != 0.0 || *pc3 != 0.0) { 2248628f99d7SShri Abhyankar pv = ba + bd[prow]; 2249628f99d7SShri Abhyankar pj = nbj + bd[prow]; 2250628f99d7SShri Abhyankar mul1 = *pc1 * *pv; 2251628f99d7SShri Abhyankar mul2 = *pc2 * *pv; 2252628f99d7SShri Abhyankar mul3 = *pc3 * *pv; 2253628f99d7SShri Abhyankar ++pv; 2254628f99d7SShri Abhyankar *pc1 = mul1; 2255628f99d7SShri Abhyankar *pc2 = mul2; 2256628f99d7SShri Abhyankar *pc3 = mul3; 2257628f99d7SShri Abhyankar 2258628f99d7SShri Abhyankar nz_tmp = bi[prow + 1] - bd[prow] - 1; 2259628f99d7SShri Abhyankar /* update this row based on pivot row */ 2260628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2261628f99d7SShri Abhyankar tmp = pv[j]; 2262628f99d7SShri Abhyankar idx = pj[j]; 2263628f99d7SShri Abhyankar rtmp11[idx] -= mul1 * tmp; 2264628f99d7SShri Abhyankar rtmp22[idx] -= mul2 * tmp; 2265628f99d7SShri Abhyankar rtmp33[idx] -= mul3 * tmp; 2266628f99d7SShri Abhyankar } 22679566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(3 + 6.0 * nz_tmp)); 2268628f99d7SShri Abhyankar } 2269628f99d7SShri Abhyankar prow = *bjtmp++; 2270628f99d7SShri Abhyankar } 2271628f99d7SShri Abhyankar 2272628f99d7SShri Abhyankar /* Now take care of diagonal 3x3 block in this set of rows */ 2273628f99d7SShri Abhyankar /* note: prow = row here */ 2274628f99d7SShri Abhyankar pc1 = rtmp11 + prow; 2275628f99d7SShri Abhyankar pc2 = rtmp22 + prow; 2276628f99d7SShri Abhyankar pc3 = rtmp33 + prow; 2277628f99d7SShri Abhyankar 2278628f99d7SShri Abhyankar sctx.pv = *pc1; 2279628f99d7SShri Abhyankar pj = bj + bi[prow]; 2280628f99d7SShri Abhyankar rs = 0.0; 2281628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2282628f99d7SShri Abhyankar idx = pj[j]; 2283628f99d7SShri Abhyankar if (idx != row) rs += PetscAbsScalar(rtmp11[idx]); 2284628f99d7SShri Abhyankar } 2285628f99d7SShri Abhyankar sctx.rs = rs; 22869566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, row)); 228707b50cabSHong Zhang if (sctx.newshift) goto endofwhile; 2288628f99d7SShri Abhyankar 2289628f99d7SShri Abhyankar if (*pc2 != 0.0 || *pc3 != 0.0) { 2290628f99d7SShri Abhyankar mul2 = (*pc2) / (*pc1); 2291628f99d7SShri Abhyankar mul3 = (*pc3) / (*pc1); 2292628f99d7SShri Abhyankar *pc2 = mul2; 2293628f99d7SShri Abhyankar *pc3 = mul3; 2294628f99d7SShri Abhyankar nz_tmp = bi[prow + 1] - bd[prow] - 1; 2295628f99d7SShri Abhyankar pj = nbj + bd[prow]; 2296628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2297628f99d7SShri Abhyankar idx = pj[j]; 2298628f99d7SShri Abhyankar tmp = rtmp11[idx]; 2299628f99d7SShri Abhyankar rtmp22[idx] -= mul2 * tmp; 2300628f99d7SShri Abhyankar rtmp33[idx] -= mul3 * tmp; 2301628f99d7SShri Abhyankar } 23029566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2 + 4.0 * nz_tmp)); 2303628f99d7SShri Abhyankar } 2304628f99d7SShri Abhyankar ++prow; 2305628f99d7SShri Abhyankar 2306628f99d7SShri Abhyankar pc2 = rtmp22 + prow; 2307628f99d7SShri Abhyankar pc3 = rtmp33 + prow; 2308628f99d7SShri Abhyankar sctx.pv = *pc2; 2309628f99d7SShri Abhyankar pj = bj + bi[prow]; 2310628f99d7SShri Abhyankar rs = 0.0; 2311628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2312628f99d7SShri Abhyankar idx = pj[j]; 2313628f99d7SShri Abhyankar if (idx != prow) rs += PetscAbsScalar(rtmp22[idx]); 2314628f99d7SShri Abhyankar } 2315628f99d7SShri Abhyankar sctx.rs = rs; 23169566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, row + 1)); 231707b50cabSHong Zhang if (sctx.newshift) goto endofwhile; 2318628f99d7SShri Abhyankar 2319628f99d7SShri Abhyankar if (*pc3 != 0.0) { 2320628f99d7SShri Abhyankar mul3 = (*pc3) / (*pc2); 2321628f99d7SShri Abhyankar *pc3 = mul3; 2322628f99d7SShri Abhyankar pj = nbj + bd[prow]; 2323628f99d7SShri Abhyankar nz_tmp = bi[prow + 1] - bd[prow] - 1; 2324628f99d7SShri Abhyankar for (j = 0; j < nz_tmp; j++) { 2325628f99d7SShri Abhyankar idx = pj[j]; 2326628f99d7SShri Abhyankar tmp = rtmp22[idx]; 2327628f99d7SShri Abhyankar rtmp33[idx] -= mul3 * tmp; 2328628f99d7SShri Abhyankar } 23299566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1 + 2.0 * nz_tmp)); 2330628f99d7SShri Abhyankar } 2331628f99d7SShri Abhyankar 2332628f99d7SShri Abhyankar pj = bj + bi[row]; 2333628f99d7SShri Abhyankar pc1 = ba + bi[row]; 2334628f99d7SShri Abhyankar pc2 = ba + bi[row + 1]; 2335628f99d7SShri Abhyankar pc3 = ba + bi[row + 2]; 2336628f99d7SShri Abhyankar 2337628f99d7SShri Abhyankar sctx.pv = rtmp33[row + 2]; 2338628f99d7SShri Abhyankar rs = 0.0; 2339628f99d7SShri Abhyankar rtmp11[row] = 1.0 / rtmp11[row]; 2340628f99d7SShri Abhyankar rtmp22[row + 1] = 1.0 / rtmp22[row + 1]; 2341628f99d7SShri Abhyankar rtmp33[row + 2] = 1.0 / rtmp33[row + 2]; 2342628f99d7SShri Abhyankar /* copy row entries from dense representation to sparse */ 2343628f99d7SShri Abhyankar for (j = 0; j < nz; j++) { 2344628f99d7SShri Abhyankar idx = pj[j]; 2345628f99d7SShri Abhyankar pc1[j] = rtmp11[idx]; 2346628f99d7SShri Abhyankar pc2[j] = rtmp22[idx]; 2347628f99d7SShri Abhyankar pc3[j] = rtmp33[idx]; 2348628f99d7SShri Abhyankar if (idx != row + 2) rs += PetscAbsScalar(pc3[j]); 2349628f99d7SShri Abhyankar } 2350628f99d7SShri Abhyankar 2351628f99d7SShri Abhyankar sctx.rs = rs; 23529566063dSJacob Faibussowitsch PetscCall(MatPivotCheck(B, A, info, &sctx, row + 2)); 235307b50cabSHong Zhang if (sctx.newshift) goto endofwhile; 2354628f99d7SShri Abhyankar break; 2355628f99d7SShri Abhyankar 2356d71ae5a4SJacob Faibussowitsch default: 2357d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Node size not yet supported "); 2358628f99d7SShri Abhyankar } 2359628f99d7SShri Abhyankar row += nodesz; /* Update the row */ 2360628f99d7SShri Abhyankar } 2361628f99d7SShri Abhyankar endofwhile:; 236207b50cabSHong Zhang } while (sctx.newshift); 23639566063dSJacob Faibussowitsch PetscCall(PetscFree3(rtmp11, rtmp22, rtmp33)); 23649566063dSJacob Faibussowitsch PetscCall(PetscFree(tmp_vec2)); 23659566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isicol, &ic)); 23669566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &r)); 23679566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol, &c)); 23682205254eSKarl Rupp 2369d3ac4fa3SBarry Smith (B)->ops->solve = MatSolve_SeqAIJ_inplace; 2370628f99d7SShri Abhyankar /* do not set solve add, since MatSolve_Inode + Add is faster */ 2371628f99d7SShri Abhyankar C->ops->solvetranspose = MatSolveTranspose_SeqAIJ_inplace; 2372628f99d7SShri Abhyankar C->ops->solvetransposeadd = MatSolveTransposeAdd_SeqAIJ_inplace; 2373628f99d7SShri Abhyankar C->assembled = PETSC_TRUE; 2374628f99d7SShri Abhyankar C->preallocated = PETSC_TRUE; 2375628f99d7SShri Abhyankar if (sctx.nshift) { 2376f4db908eSBarry Smith if (info->shifttype == (PetscReal)MAT_SHIFT_POSITIVE_DEFINITE) { 23779566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "number of shift_pd tries %" PetscInt_FMT ", shift_amount %g, diagonal shifted up by %e fraction top_value %e\n", sctx.nshift, (double)sctx.shift_amount, (double)sctx.shift_fraction, (double)sctx.shift_top)); 2378f4db908eSBarry Smith } else if (info->shifttype == (PetscReal)MAT_SHIFT_NONZERO) { 23799566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "number of shift_nz tries %" PetscInt_FMT ", shift_amount %g\n", sctx.nshift, (double)sctx.shift_amount)); 2380628f99d7SShri Abhyankar } 2381628f99d7SShri Abhyankar } 23829566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(C->cmap->n)); 23839566063dSJacob Faibussowitsch PetscCall(MatSeqAIJCheckInode(C)); 23843ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2385628f99d7SShri Abhyankar } 2386ff6a9541SJacob Faibussowitsch #endif 2387628f99d7SShri Abhyankar 2388d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSolve_SeqAIJ_Inode(Mat A, Vec bb, Vec xx) 2389d71ae5a4SJacob Faibussowitsch { 2390019b515eSShri Abhyankar Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 2391019b515eSShri Abhyankar IS iscol = a->col, isrow = a->row; 2392019b515eSShri Abhyankar const PetscInt *r, *c, *rout, *cout; 23938758e1faSBarry Smith PetscInt i, j, n = A->rmap->n; 23948758e1faSBarry Smith PetscInt node_max, row, nsz, aii, i0, i1, nz; 23958758e1faSBarry Smith const PetscInt *ai = a->i, *a_j = a->j, *ns, *vi, *ad, *aj; 2396019b515eSShri Abhyankar PetscScalar *x, *tmp, *tmps, tmp0, tmp1; 2397019b515eSShri Abhyankar PetscScalar sum1, sum2, sum3, sum4, sum5; 2398019b515eSShri Abhyankar const MatScalar *v1, *v2, *v3, *v4, *v5, *a_a = a->a, *aa; 2399019b515eSShri Abhyankar const PetscScalar *b; 2400019b515eSShri Abhyankar 2401019b515eSShri Abhyankar PetscFunctionBegin; 240208401ef6SPierre Jolivet PetscCheck(a->inode.size, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 2403019b515eSShri Abhyankar node_max = a->inode.node_count; 2404019b515eSShri Abhyankar ns = a->inode.size; /* Node Size array */ 2405019b515eSShri Abhyankar 24069566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(bb, &b)); 24079566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(xx, &x)); 2408019b515eSShri Abhyankar tmp = a->solve_work; 2409019b515eSShri Abhyankar 24109371c9d4SSatish Balay PetscCall(ISGetIndices(isrow, &rout)); 24119371c9d4SSatish Balay r = rout; 24129371c9d4SSatish Balay PetscCall(ISGetIndices(iscol, &cout)); 24139371c9d4SSatish Balay c = cout; 2414019b515eSShri Abhyankar 2415019b515eSShri Abhyankar /* forward solve the lower triangular */ 2416019b515eSShri Abhyankar tmps = tmp; 2417019b515eSShri Abhyankar aa = a_a; 2418019b515eSShri Abhyankar aj = a_j; 2419019b515eSShri Abhyankar ad = a->diag; 2420019b515eSShri Abhyankar 2421019b515eSShri Abhyankar for (i = 0, row = 0; i < node_max; ++i) { 2422019b515eSShri Abhyankar nsz = ns[i]; 2423019b515eSShri Abhyankar aii = ai[row]; 2424019b515eSShri Abhyankar v1 = aa + aii; 2425019b515eSShri Abhyankar vi = aj + aii; 2426019b515eSShri Abhyankar nz = ai[row + 1] - ai[row]; 2427019b515eSShri Abhyankar 242898991853SShri Abhyankar if (i < node_max - 1) { 242998991853SShri Abhyankar /* Prefetch the indices for the next block */ 243050d8bf02SJed Brown PetscPrefetchBlock(aj + ai[row + nsz], ai[row + nsz + 1] - ai[row + nsz], 0, PETSC_PREFETCH_HINT_NTA); /* indices */ 243198991853SShri Abhyankar /* Prefetch the data for the next block */ 243250d8bf02SJed Brown PetscPrefetchBlock(aa + ai[row + nsz], ai[row + nsz + ns[i + 1]] - ai[row + nsz], 0, PETSC_PREFETCH_HINT_NTA); 243398991853SShri Abhyankar } 243498991853SShri Abhyankar 2435019b515eSShri Abhyankar switch (nsz) { /* Each loop in 'case' is unrolled */ 2436019b515eSShri Abhyankar case 1: 2437019b515eSShri Abhyankar sum1 = b[r[row]]; 2438019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2439019b515eSShri Abhyankar i0 = vi[j]; 2440019b515eSShri Abhyankar i1 = vi[j + 1]; 2441019b515eSShri Abhyankar tmp0 = tmps[i0]; 2442019b515eSShri Abhyankar tmp1 = tmps[i1]; 2443019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2444019b515eSShri Abhyankar } 2445019b515eSShri Abhyankar if (j == nz - 1) { 2446019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2447019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2448019b515eSShri Abhyankar } 2449019b515eSShri Abhyankar tmp[row++] = sum1; 2450019b515eSShri Abhyankar break; 2451019b515eSShri Abhyankar case 2: 2452019b515eSShri Abhyankar sum1 = b[r[row]]; 2453019b515eSShri Abhyankar sum2 = b[r[row + 1]]; 2454019b515eSShri Abhyankar v2 = aa + ai[row + 1]; 2455019b515eSShri Abhyankar 2456019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2457019b515eSShri Abhyankar i0 = vi[j]; 2458019b515eSShri Abhyankar i1 = vi[j + 1]; 2459019b515eSShri Abhyankar tmp0 = tmps[i0]; 2460019b515eSShri Abhyankar tmp1 = tmps[i1]; 2461019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2462019b515eSShri Abhyankar sum2 -= v2[j] * tmp0 + v2[j + 1] * tmp1; 2463019b515eSShri Abhyankar } 2464019b515eSShri Abhyankar if (j == nz - 1) { 2465019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2466019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2467019b515eSShri Abhyankar sum2 -= v2[j] * tmp0; 2468019b515eSShri Abhyankar } 2469019b515eSShri Abhyankar sum2 -= v2[nz] * sum1; 2470019b515eSShri Abhyankar tmp[row++] = sum1; 2471019b515eSShri Abhyankar tmp[row++] = sum2; 2472019b515eSShri Abhyankar break; 2473019b515eSShri Abhyankar case 3: 2474019b515eSShri Abhyankar sum1 = b[r[row]]; 2475019b515eSShri Abhyankar sum2 = b[r[row + 1]]; 2476019b515eSShri Abhyankar sum3 = b[r[row + 2]]; 2477019b515eSShri Abhyankar v2 = aa + ai[row + 1]; 2478019b515eSShri Abhyankar v3 = aa + ai[row + 2]; 2479019b515eSShri Abhyankar 2480019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2481019b515eSShri Abhyankar i0 = vi[j]; 2482019b515eSShri Abhyankar i1 = vi[j + 1]; 2483019b515eSShri Abhyankar tmp0 = tmps[i0]; 2484019b515eSShri Abhyankar tmp1 = tmps[i1]; 2485019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2486019b515eSShri Abhyankar sum2 -= v2[j] * tmp0 + v2[j + 1] * tmp1; 2487019b515eSShri Abhyankar sum3 -= v3[j] * tmp0 + v3[j + 1] * tmp1; 2488019b515eSShri Abhyankar } 2489019b515eSShri Abhyankar if (j == nz - 1) { 2490019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2491019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2492019b515eSShri Abhyankar sum2 -= v2[j] * tmp0; 2493019b515eSShri Abhyankar sum3 -= v3[j] * tmp0; 2494019b515eSShri Abhyankar } 2495019b515eSShri Abhyankar sum2 -= v2[nz] * sum1; 2496019b515eSShri Abhyankar sum3 -= v3[nz] * sum1; 2497019b515eSShri Abhyankar sum3 -= v3[nz + 1] * sum2; 2498019b515eSShri Abhyankar tmp[row++] = sum1; 2499019b515eSShri Abhyankar tmp[row++] = sum2; 2500019b515eSShri Abhyankar tmp[row++] = sum3; 2501019b515eSShri Abhyankar break; 2502019b515eSShri Abhyankar 2503019b515eSShri Abhyankar case 4: 2504019b515eSShri Abhyankar sum1 = b[r[row]]; 2505019b515eSShri Abhyankar sum2 = b[r[row + 1]]; 2506019b515eSShri Abhyankar sum3 = b[r[row + 2]]; 2507019b515eSShri Abhyankar sum4 = b[r[row + 3]]; 2508019b515eSShri Abhyankar v2 = aa + ai[row + 1]; 2509019b515eSShri Abhyankar v3 = aa + ai[row + 2]; 2510019b515eSShri Abhyankar v4 = aa + ai[row + 3]; 2511019b515eSShri Abhyankar 2512019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2513019b515eSShri Abhyankar i0 = vi[j]; 2514019b515eSShri Abhyankar i1 = vi[j + 1]; 2515019b515eSShri Abhyankar tmp0 = tmps[i0]; 2516019b515eSShri Abhyankar tmp1 = tmps[i1]; 2517019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2518019b515eSShri Abhyankar sum2 -= v2[j] * tmp0 + v2[j + 1] * tmp1; 2519019b515eSShri Abhyankar sum3 -= v3[j] * tmp0 + v3[j + 1] * tmp1; 2520019b515eSShri Abhyankar sum4 -= v4[j] * tmp0 + v4[j + 1] * tmp1; 2521019b515eSShri Abhyankar } 2522019b515eSShri Abhyankar if (j == nz - 1) { 2523019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2524019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2525019b515eSShri Abhyankar sum2 -= v2[j] * tmp0; 2526019b515eSShri Abhyankar sum3 -= v3[j] * tmp0; 2527019b515eSShri Abhyankar sum4 -= v4[j] * tmp0; 2528019b515eSShri Abhyankar } 2529019b515eSShri Abhyankar sum2 -= v2[nz] * sum1; 2530019b515eSShri Abhyankar sum3 -= v3[nz] * sum1; 2531019b515eSShri Abhyankar sum4 -= v4[nz] * sum1; 2532019b515eSShri Abhyankar sum3 -= v3[nz + 1] * sum2; 2533019b515eSShri Abhyankar sum4 -= v4[nz + 1] * sum2; 2534019b515eSShri Abhyankar sum4 -= v4[nz + 2] * sum3; 2535019b515eSShri Abhyankar 2536019b515eSShri Abhyankar tmp[row++] = sum1; 2537019b515eSShri Abhyankar tmp[row++] = sum2; 2538019b515eSShri Abhyankar tmp[row++] = sum3; 2539019b515eSShri Abhyankar tmp[row++] = sum4; 2540019b515eSShri Abhyankar break; 2541019b515eSShri Abhyankar case 5: 2542019b515eSShri Abhyankar sum1 = b[r[row]]; 2543019b515eSShri Abhyankar sum2 = b[r[row + 1]]; 2544019b515eSShri Abhyankar sum3 = b[r[row + 2]]; 2545019b515eSShri Abhyankar sum4 = b[r[row + 3]]; 2546019b515eSShri Abhyankar sum5 = b[r[row + 4]]; 2547019b515eSShri Abhyankar v2 = aa + ai[row + 1]; 2548019b515eSShri Abhyankar v3 = aa + ai[row + 2]; 2549019b515eSShri Abhyankar v4 = aa + ai[row + 3]; 2550019b515eSShri Abhyankar v5 = aa + ai[row + 4]; 2551019b515eSShri Abhyankar 2552019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2553019b515eSShri Abhyankar i0 = vi[j]; 2554019b515eSShri Abhyankar i1 = vi[j + 1]; 2555019b515eSShri Abhyankar tmp0 = tmps[i0]; 2556019b515eSShri Abhyankar tmp1 = tmps[i1]; 2557019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2558019b515eSShri Abhyankar sum2 -= v2[j] * tmp0 + v2[j + 1] * tmp1; 2559019b515eSShri Abhyankar sum3 -= v3[j] * tmp0 + v3[j + 1] * tmp1; 2560019b515eSShri Abhyankar sum4 -= v4[j] * tmp0 + v4[j + 1] * tmp1; 2561019b515eSShri Abhyankar sum5 -= v5[j] * tmp0 + v5[j + 1] * tmp1; 2562019b515eSShri Abhyankar } 2563019b515eSShri Abhyankar if (j == nz - 1) { 2564019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2565019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2566019b515eSShri Abhyankar sum2 -= v2[j] * tmp0; 2567019b515eSShri Abhyankar sum3 -= v3[j] * tmp0; 2568019b515eSShri Abhyankar sum4 -= v4[j] * tmp0; 2569019b515eSShri Abhyankar sum5 -= v5[j] * tmp0; 2570019b515eSShri Abhyankar } 2571019b515eSShri Abhyankar 2572019b515eSShri Abhyankar sum2 -= v2[nz] * sum1; 2573019b515eSShri Abhyankar sum3 -= v3[nz] * sum1; 2574019b515eSShri Abhyankar sum4 -= v4[nz] * sum1; 2575019b515eSShri Abhyankar sum5 -= v5[nz] * sum1; 2576019b515eSShri Abhyankar sum3 -= v3[nz + 1] * sum2; 2577019b515eSShri Abhyankar sum4 -= v4[nz + 1] * sum2; 2578019b515eSShri Abhyankar sum5 -= v5[nz + 1] * sum2; 2579019b515eSShri Abhyankar sum4 -= v4[nz + 2] * sum3; 2580019b515eSShri Abhyankar sum5 -= v5[nz + 2] * sum3; 2581019b515eSShri Abhyankar sum5 -= v5[nz + 3] * sum4; 2582019b515eSShri Abhyankar 2583019b515eSShri Abhyankar tmp[row++] = sum1; 2584019b515eSShri Abhyankar tmp[row++] = sum2; 2585019b515eSShri Abhyankar tmp[row++] = sum3; 2586019b515eSShri Abhyankar tmp[row++] = sum4; 2587019b515eSShri Abhyankar tmp[row++] = sum5; 2588019b515eSShri Abhyankar break; 2589d71ae5a4SJacob Faibussowitsch default: 2590d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not yet supported "); 2591019b515eSShri Abhyankar } 2592019b515eSShri Abhyankar } 2593019b515eSShri Abhyankar /* backward solve the upper triangular */ 2594019b515eSShri Abhyankar for (i = node_max - 1, row = n - 1; i >= 0; i--) { 2595019b515eSShri Abhyankar nsz = ns[i]; 2596019b515eSShri Abhyankar aii = ad[row + 1] + 1; 2597019b515eSShri Abhyankar v1 = aa + aii; 2598019b515eSShri Abhyankar vi = aj + aii; 2599019b515eSShri Abhyankar nz = ad[row] - ad[row + 1] - 1; 260098991853SShri Abhyankar 260198991853SShri Abhyankar if (i > 0) { 260298991853SShri Abhyankar /* Prefetch the indices for the next block */ 260350d8bf02SJed Brown PetscPrefetchBlock(aj + ad[row - nsz + 1] + 1, ad[row - nsz] - ad[row - nsz + 1], 0, PETSC_PREFETCH_HINT_NTA); 260498991853SShri Abhyankar /* Prefetch the data for the next block */ 260550d8bf02SJed Brown PetscPrefetchBlock(aa + ad[row - nsz + 1] + 1, ad[row - nsz - ns[i - 1] + 1] - ad[row - nsz + 1], 0, PETSC_PREFETCH_HINT_NTA); 260698991853SShri Abhyankar } 260798991853SShri Abhyankar 2608019b515eSShri Abhyankar switch (nsz) { /* Each loop in 'case' is unrolled */ 2609019b515eSShri Abhyankar case 1: 2610019b515eSShri Abhyankar sum1 = tmp[row]; 2611019b515eSShri Abhyankar 2612019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2613019b515eSShri Abhyankar i0 = vi[j]; 2614019b515eSShri Abhyankar i1 = vi[j + 1]; 2615019b515eSShri Abhyankar tmp0 = tmps[i0]; 2616019b515eSShri Abhyankar tmp1 = tmps[i1]; 2617019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2618019b515eSShri Abhyankar } 2619019b515eSShri Abhyankar if (j == nz - 1) { 2620019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2621019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2622019b515eSShri Abhyankar } 26239371c9d4SSatish Balay x[c[row]] = tmp[row] = sum1 * v1[nz]; 26249371c9d4SSatish Balay row--; 2625019b515eSShri Abhyankar break; 2626019b515eSShri Abhyankar case 2: 2627019b515eSShri Abhyankar sum1 = tmp[row]; 2628019b515eSShri Abhyankar sum2 = tmp[row - 1]; 2629019b515eSShri Abhyankar v2 = aa + ad[row] + 1; 2630019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2631019b515eSShri Abhyankar i0 = vi[j]; 2632019b515eSShri Abhyankar i1 = vi[j + 1]; 2633019b515eSShri Abhyankar tmp0 = tmps[i0]; 2634019b515eSShri Abhyankar tmp1 = tmps[i1]; 2635019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2636019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0 + v2[j + 2] * tmp1; 2637019b515eSShri Abhyankar } 2638019b515eSShri Abhyankar if (j == nz - 1) { 2639019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2640019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2641019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0; 2642019b515eSShri Abhyankar } 2643019b515eSShri Abhyankar 26449371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum1 * v1[nz]; 26459371c9d4SSatish Balay row--; 2646019b515eSShri Abhyankar sum2 -= v2[0] * tmp0; 26479371c9d4SSatish Balay x[c[row]] = tmp[row] = sum2 * v2[nz + 1]; 26489371c9d4SSatish Balay row--; 2649019b515eSShri Abhyankar break; 2650019b515eSShri Abhyankar case 3: 2651019b515eSShri Abhyankar sum1 = tmp[row]; 2652019b515eSShri Abhyankar sum2 = tmp[row - 1]; 2653019b515eSShri Abhyankar sum3 = tmp[row - 2]; 2654019b515eSShri Abhyankar v2 = aa + ad[row] + 1; 2655019b515eSShri Abhyankar v3 = aa + ad[row - 1] + 1; 2656019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2657019b515eSShri Abhyankar i0 = vi[j]; 2658019b515eSShri Abhyankar i1 = vi[j + 1]; 2659019b515eSShri Abhyankar tmp0 = tmps[i0]; 2660019b515eSShri Abhyankar tmp1 = tmps[i1]; 2661019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2662019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0 + v2[j + 2] * tmp1; 2663019b515eSShri Abhyankar sum3 -= v3[j + 2] * tmp0 + v3[j + 3] * tmp1; 2664019b515eSShri Abhyankar } 2665019b515eSShri Abhyankar if (j == nz - 1) { 2666019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2667019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2668019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0; 2669019b515eSShri Abhyankar sum3 -= v3[j + 2] * tmp0; 2670019b515eSShri Abhyankar } 26719371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum1 * v1[nz]; 26729371c9d4SSatish Balay row--; 2673019b515eSShri Abhyankar sum2 -= v2[0] * tmp0; 2674019b515eSShri Abhyankar sum3 -= v3[1] * tmp0; 26759371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum2 * v2[nz + 1]; 26769371c9d4SSatish Balay row--; 2677019b515eSShri Abhyankar sum3 -= v3[0] * tmp0; 26789371c9d4SSatish Balay x[c[row]] = tmp[row] = sum3 * v3[nz + 2]; 26799371c9d4SSatish Balay row--; 2680019b515eSShri Abhyankar 2681019b515eSShri Abhyankar break; 2682019b515eSShri Abhyankar case 4: 2683019b515eSShri Abhyankar sum1 = tmp[row]; 2684019b515eSShri Abhyankar sum2 = tmp[row - 1]; 2685019b515eSShri Abhyankar sum3 = tmp[row - 2]; 2686019b515eSShri Abhyankar sum4 = tmp[row - 3]; 2687019b515eSShri Abhyankar v2 = aa + ad[row] + 1; 2688019b515eSShri Abhyankar v3 = aa + ad[row - 1] + 1; 2689019b515eSShri Abhyankar v4 = aa + ad[row - 2] + 1; 2690019b515eSShri Abhyankar 2691019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2692019b515eSShri Abhyankar i0 = vi[j]; 2693019b515eSShri Abhyankar i1 = vi[j + 1]; 2694019b515eSShri Abhyankar tmp0 = tmps[i0]; 2695019b515eSShri Abhyankar tmp1 = tmps[i1]; 2696019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2697019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0 + v2[j + 2] * tmp1; 2698019b515eSShri Abhyankar sum3 -= v3[j + 2] * tmp0 + v3[j + 3] * tmp1; 2699019b515eSShri Abhyankar sum4 -= v4[j + 3] * tmp0 + v4[j + 4] * tmp1; 2700019b515eSShri Abhyankar } 2701019b515eSShri Abhyankar if (j == nz - 1) { 2702019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2703019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2704019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0; 2705019b515eSShri Abhyankar sum3 -= v3[j + 2] * tmp0; 2706019b515eSShri Abhyankar sum4 -= v4[j + 3] * tmp0; 2707019b515eSShri Abhyankar } 2708019b515eSShri Abhyankar 27099371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum1 * v1[nz]; 27109371c9d4SSatish Balay row--; 2711019b515eSShri Abhyankar sum2 -= v2[0] * tmp0; 2712019b515eSShri Abhyankar sum3 -= v3[1] * tmp0; 2713019b515eSShri Abhyankar sum4 -= v4[2] * tmp0; 27149371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum2 * v2[nz + 1]; 27159371c9d4SSatish Balay row--; 2716019b515eSShri Abhyankar sum3 -= v3[0] * tmp0; 2717019b515eSShri Abhyankar sum4 -= v4[1] * tmp0; 27189371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum3 * v3[nz + 2]; 27199371c9d4SSatish Balay row--; 2720019b515eSShri Abhyankar sum4 -= v4[0] * tmp0; 27219371c9d4SSatish Balay x[c[row]] = tmp[row] = sum4 * v4[nz + 3]; 27229371c9d4SSatish Balay row--; 2723019b515eSShri Abhyankar break; 2724019b515eSShri Abhyankar case 5: 2725019b515eSShri Abhyankar sum1 = tmp[row]; 2726019b515eSShri Abhyankar sum2 = tmp[row - 1]; 2727019b515eSShri Abhyankar sum3 = tmp[row - 2]; 2728019b515eSShri Abhyankar sum4 = tmp[row - 3]; 2729019b515eSShri Abhyankar sum5 = tmp[row - 4]; 2730019b515eSShri Abhyankar v2 = aa + ad[row] + 1; 2731019b515eSShri Abhyankar v3 = aa + ad[row - 1] + 1; 2732019b515eSShri Abhyankar v4 = aa + ad[row - 2] + 1; 2733019b515eSShri Abhyankar v5 = aa + ad[row - 3] + 1; 2734019b515eSShri Abhyankar for (j = 0; j < nz - 1; j += 2) { 2735019b515eSShri Abhyankar i0 = vi[j]; 2736019b515eSShri Abhyankar i1 = vi[j + 1]; 2737019b515eSShri Abhyankar tmp0 = tmps[i0]; 2738019b515eSShri Abhyankar tmp1 = tmps[i1]; 2739019b515eSShri Abhyankar sum1 -= v1[j] * tmp0 + v1[j + 1] * tmp1; 2740019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0 + v2[j + 2] * tmp1; 2741019b515eSShri Abhyankar sum3 -= v3[j + 2] * tmp0 + v3[j + 3] * tmp1; 2742019b515eSShri Abhyankar sum4 -= v4[j + 3] * tmp0 + v4[j + 4] * tmp1; 2743019b515eSShri Abhyankar sum5 -= v5[j + 4] * tmp0 + v5[j + 5] * tmp1; 2744019b515eSShri Abhyankar } 2745019b515eSShri Abhyankar if (j == nz - 1) { 2746019b515eSShri Abhyankar tmp0 = tmps[vi[j]]; 2747019b515eSShri Abhyankar sum1 -= v1[j] * tmp0; 2748019b515eSShri Abhyankar sum2 -= v2[j + 1] * tmp0; 2749019b515eSShri Abhyankar sum3 -= v3[j + 2] * tmp0; 2750019b515eSShri Abhyankar sum4 -= v4[j + 3] * tmp0; 2751019b515eSShri Abhyankar sum5 -= v5[j + 4] * tmp0; 2752019b515eSShri Abhyankar } 2753019b515eSShri Abhyankar 27549371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum1 * v1[nz]; 27559371c9d4SSatish Balay row--; 2756019b515eSShri Abhyankar sum2 -= v2[0] * tmp0; 2757019b515eSShri Abhyankar sum3 -= v3[1] * tmp0; 2758019b515eSShri Abhyankar sum4 -= v4[2] * tmp0; 2759019b515eSShri Abhyankar sum5 -= v5[3] * tmp0; 27609371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum2 * v2[nz + 1]; 27619371c9d4SSatish Balay row--; 2762019b515eSShri Abhyankar sum3 -= v3[0] * tmp0; 2763019b515eSShri Abhyankar sum4 -= v4[1] * tmp0; 2764019b515eSShri Abhyankar sum5 -= v5[2] * tmp0; 27659371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum3 * v3[nz + 2]; 27669371c9d4SSatish Balay row--; 2767019b515eSShri Abhyankar sum4 -= v4[0] * tmp0; 2768019b515eSShri Abhyankar sum5 -= v5[1] * tmp0; 27699371c9d4SSatish Balay tmp0 = x[c[row]] = tmp[row] = sum4 * v4[nz + 3]; 27709371c9d4SSatish Balay row--; 2771019b515eSShri Abhyankar sum5 -= v5[0] * tmp0; 27729371c9d4SSatish Balay x[c[row]] = tmp[row] = sum5 * v5[nz + 4]; 27739371c9d4SSatish Balay row--; 2774019b515eSShri Abhyankar break; 2775d71ae5a4SJacob Faibussowitsch default: 2776d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_COR, "Node size not yet supported "); 2777019b515eSShri Abhyankar } 2778019b515eSShri Abhyankar } 27799566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &rout)); 27809566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol, &cout)); 27819566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(bb, &b)); 27829566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(xx, &x)); 27839566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * a->nz - A->cmap->n)); 27843ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2785019b515eSShri Abhyankar } 2786019b515eSShri Abhyankar 27874c1414c8SBarry Smith /* 27884c1414c8SBarry Smith Makes a longer coloring[] array and calls the usual code with that 27894c1414c8SBarry Smith */ 2790d71ae5a4SJacob Faibussowitsch PetscErrorCode MatColoringPatch_SeqAIJ_Inode(Mat mat, PetscInt ncolors, PetscInt nin, ISColoringValue coloring[], ISColoring *iscoloring) 2791d71ae5a4SJacob Faibussowitsch { 27924c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)mat->data; 2793d0f46423SBarry Smith PetscInt n = mat->cmap->n, m = a->inode.node_count, j, *ns = a->inode.size, row; 27944c1414c8SBarry Smith PetscInt *colorused, i; 27954c1414c8SBarry Smith ISColoringValue *newcolor; 27964c1414c8SBarry Smith 27974c1414c8SBarry Smith PetscFunctionBegin; 279808401ef6SPierre Jolivet PetscCheck(a->inode.size, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 27999566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n + 1, &newcolor)); 28004c1414c8SBarry Smith /* loop over inodes, marking a color for each column*/ 28014c1414c8SBarry Smith row = 0; 28024c1414c8SBarry Smith for (i = 0; i < m; i++) { 2803ad540459SPierre Jolivet for (j = 0; j < ns[i]; j++) newcolor[row++] = coloring[i] + j * ncolors; 28044c1414c8SBarry Smith } 28054c1414c8SBarry Smith 28064c1414c8SBarry Smith /* eliminate unneeded colors */ 28079566063dSJacob Faibussowitsch PetscCall(PetscCalloc1(5 * ncolors, &colorused)); 2808ad540459SPierre Jolivet for (i = 0; i < n; i++) colorused[newcolor[i]] = 1; 28094c1414c8SBarry Smith 2810ad540459SPierre Jolivet for (i = 1; i < 5 * ncolors; i++) colorused[i] += colorused[i - 1]; 28114c1414c8SBarry Smith ncolors = colorused[5 * ncolors - 1]; 2812ad540459SPierre Jolivet for (i = 0; i < n; i++) newcolor[i] = colorused[newcolor[i]] - 1; 28139566063dSJacob Faibussowitsch PetscCall(PetscFree(colorused)); 28149566063dSJacob Faibussowitsch PetscCall(ISColoringCreate(PetscObjectComm((PetscObject)mat), ncolors, n, newcolor, PETSC_OWN_POINTER, iscoloring)); 28159566063dSJacob Faibussowitsch PetscCall(PetscFree(coloring)); 28163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 28174c1414c8SBarry Smith } 28184c1414c8SBarry Smith 2819af0996ceSBarry Smith #include <petsc/private/kernels/blockinvert.h> 28202af78befSBarry Smith 2821d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSOR_SeqAIJ_Inode(Mat A, Vec bb, PetscReal omega, MatSORType flag, PetscReal fshift, PetscInt its, PetscInt lits, Vec xx) 2822d71ae5a4SJacob Faibussowitsch { 28232af78befSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 28247aaeff0aSMatthew G. Knepley PetscScalar sum1 = 0.0, sum2 = 0.0, sum3 = 0.0, sum4 = 0.0, sum5 = 0.0, tmp0, tmp1, tmp2, tmp3; 28255850ef23SBarry Smith MatScalar *ibdiag, *bdiag, work[25], *t; 2826a8b09249SBarry Smith PetscScalar *x, tmp4, tmp5, x1, x2, x3, x4, x5; 28277aaeff0aSMatthew G. Knepley const MatScalar *v = a->a, *v1 = NULL, *v2 = NULL, *v3 = NULL, *v4 = NULL, *v5 = NULL; 28285850ef23SBarry Smith const PetscScalar *xb, *b; 28297b6c816cSBarry Smith PetscReal zeropivot = 100. * PETSC_MACHINE_EPSILON, shift = 0.0; 28308758e1faSBarry Smith PetscInt n, m = a->inode.node_count, cnt = 0, i, j, row, i1, i2; 28318758e1faSBarry Smith PetscInt sz, k, ipvt[5]; 28327b6c816cSBarry Smith PetscBool allowzeropivot, zeropivotdetected; 28338758e1faSBarry Smith const PetscInt *sizes = a->inode.size, *idx, *diag = a->diag, *ii = a->i; 28342af78befSBarry Smith 28352af78befSBarry Smith PetscFunctionBegin; 2836a455e926SHong Zhang allowzeropivot = PetscNot(A->erroriffailure); 283708401ef6SPierre Jolivet PetscCheck(a->inode.size, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 283808401ef6SPierre Jolivet PetscCheck(omega == 1.0, PETSC_COMM_SELF, PETSC_ERR_SUP, "No support for omega != 1.0; use -mat_no_inode"); 283908401ef6SPierre Jolivet PetscCheck(fshift == 0.0, PETSC_COMM_SELF, PETSC_ERR_SUP, "No support for fshift != 0.0; use -mat_no_inode"); 28402af78befSBarry Smith 284171f1c65dSBarry Smith if (!a->inode.ibdiagvalid) { 28422af78befSBarry Smith if (!a->inode.ibdiag) { 28432af78befSBarry Smith /* calculate space needed for diagonal blocks */ 2844ad540459SPierre Jolivet for (i = 0; i < m; i++) cnt += sizes[i] * sizes[i]; 2845f0d39aaaSBarry Smith a->inode.bdiagsize = cnt; 28462205254eSKarl Rupp 28479566063dSJacob Faibussowitsch PetscCall(PetscMalloc3(cnt, &a->inode.ibdiag, cnt, &a->inode.bdiag, A->rmap->n, &a->inode.ssor_work)); 284871f1c65dSBarry Smith } 284971f1c65dSBarry Smith 285071f1c65dSBarry Smith /* copy over the diagonal blocks and invert them */ 28512af78befSBarry Smith ibdiag = a->inode.ibdiag; 28522af78befSBarry Smith bdiag = a->inode.bdiag; 28532af78befSBarry Smith cnt = 0; 28542af78befSBarry Smith for (i = 0, row = 0; i < m; i++) { 28552af78befSBarry Smith for (j = 0; j < sizes[i]; j++) { 2856ad540459SPierre Jolivet for (k = 0; k < sizes[i]; k++) bdiag[cnt + k * sizes[i] + j] = v[diag[row + j] - j + k]; 28572af78befSBarry Smith } 28589566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(ibdiag + cnt, bdiag + cnt, sizes[i] * sizes[i])); 28592af78befSBarry Smith 28602af78befSBarry Smith switch (sizes[i]) { 28612af78befSBarry Smith case 1: 28622af78befSBarry Smith /* Create matrix data structure */ 28638e0e2a9aSHong Zhang if (PetscAbsScalar(ibdiag[cnt]) < zeropivot) { 28648e0e2a9aSHong Zhang if (allowzeropivot) { 28657b6c816cSBarry Smith A->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 28667b6c816cSBarry Smith A->factorerror_zeropivot_value = PetscAbsScalar(ibdiag[cnt]); 28677b6c816cSBarry Smith A->factorerror_zeropivot_row = row; 28689566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Zero pivot, row %" PetscInt_FMT "\n", row)); 286998921bdaSJacob Faibussowitsch } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_MAT_LU_ZRPVT, "Zero pivot on row %" PetscInt_FMT, row); 28708e0e2a9aSHong Zhang } 287164c62002SMatthew Knepley ibdiag[cnt] = 1.0 / ibdiag[cnt]; 28722af78befSBarry Smith break; 28732af78befSBarry Smith case 2: 28749566063dSJacob Faibussowitsch PetscCall(PetscKernel_A_gets_inverse_A_2(ibdiag + cnt, shift, allowzeropivot, &zeropivotdetected)); 28757b6c816cSBarry Smith if (zeropivotdetected) A->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 28762af78befSBarry Smith break; 28772af78befSBarry Smith case 3: 28789566063dSJacob Faibussowitsch PetscCall(PetscKernel_A_gets_inverse_A_3(ibdiag + cnt, shift, allowzeropivot, &zeropivotdetected)); 28797b6c816cSBarry Smith if (zeropivotdetected) A->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 28802af78befSBarry Smith break; 28812af78befSBarry Smith case 4: 28829566063dSJacob Faibussowitsch PetscCall(PetscKernel_A_gets_inverse_A_4(ibdiag + cnt, shift, allowzeropivot, &zeropivotdetected)); 28837b6c816cSBarry Smith if (zeropivotdetected) A->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 28842af78befSBarry Smith break; 28852af78befSBarry Smith case 5: 28869566063dSJacob Faibussowitsch PetscCall(PetscKernel_A_gets_inverse_A_5(ibdiag + cnt, ipvt, work, shift, allowzeropivot, &zeropivotdetected)); 28877b6c816cSBarry Smith if (zeropivotdetected) A->factorerrortype = MAT_FACTOR_NUMERIC_ZEROPIVOT; 28882af78befSBarry Smith break; 2889d71ae5a4SJacob Faibussowitsch default: 2890d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Inode size %" PetscInt_FMT " not supported", sizes[i]); 28912af78befSBarry Smith } 28922af78befSBarry Smith cnt += sizes[i] * sizes[i]; 28932af78befSBarry Smith row += sizes[i]; 28942af78befSBarry Smith } 289571f1c65dSBarry Smith a->inode.ibdiagvalid = PETSC_TRUE; 28962af78befSBarry Smith } 28972af78befSBarry Smith ibdiag = a->inode.ibdiag; 28982af78befSBarry Smith bdiag = a->inode.bdiag; 28995850ef23SBarry Smith t = a->inode.ssor_work; 29002af78befSBarry Smith 29019566063dSJacob Faibussowitsch PetscCall(VecGetArray(xx, &x)); 29029566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(bb, &b)); 29035850ef23SBarry Smith /* We count flops by assuming the upper triangular and lower triangular parts have the same number of nonzeros */ 29045850ef23SBarry Smith if (flag & SOR_ZERO_INITIAL_GUESS) { 29052af78befSBarry Smith if (flag & SOR_FORWARD_SWEEP || flag & SOR_LOCAL_FORWARD_SWEEP) { 29068862d2efSBarry Smith for (i = 0, row = 0; i < m; i++) { 29078862d2efSBarry Smith sz = diag[row] - ii[row]; 29088862d2efSBarry Smith v1 = a->a + ii[row]; 29098862d2efSBarry Smith idx = a->j + ii[row]; 29108862d2efSBarry Smith 29114108e4d5SBarry Smith /* see comments for MatMult_SeqAIJ_Inode() for how this is coded */ 29128862d2efSBarry Smith switch (sizes[i]) { 29138862d2efSBarry Smith case 1: 29148862d2efSBarry Smith 29158862d2efSBarry Smith sum1 = b[row]; 29168862d2efSBarry Smith for (n = 0; n < sz - 1; n += 2) { 29178862d2efSBarry Smith i1 = idx[0]; 29188862d2efSBarry Smith i2 = idx[1]; 29198862d2efSBarry Smith idx += 2; 29208862d2efSBarry Smith tmp0 = x[i1]; 29218862d2efSBarry Smith tmp1 = x[i2]; 29229371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 29239371c9d4SSatish Balay v1 += 2; 29248862d2efSBarry Smith } 29258862d2efSBarry Smith 29268862d2efSBarry Smith if (n == sz - 1) { 2927f0d39aaaSBarry Smith tmp0 = x[*idx]; 2928f0d39aaaSBarry Smith sum1 -= *v1 * tmp0; 29298862d2efSBarry Smith } 29305850ef23SBarry Smith t[row] = sum1; 29318862d2efSBarry Smith x[row++] = sum1 * (*ibdiag++); 29328862d2efSBarry Smith break; 2933f0d39aaaSBarry Smith case 2: 2934f0d39aaaSBarry Smith v2 = a->a + ii[row + 1]; 2935f0d39aaaSBarry Smith sum1 = b[row]; 2936f0d39aaaSBarry Smith sum2 = b[row + 1]; 2937f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 2938f0d39aaaSBarry Smith i1 = idx[0]; 2939f0d39aaaSBarry Smith i2 = idx[1]; 2940f0d39aaaSBarry Smith idx += 2; 2941f0d39aaaSBarry Smith tmp0 = x[i1]; 2942f0d39aaaSBarry Smith tmp1 = x[i2]; 29439371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 29449371c9d4SSatish Balay v1 += 2; 29459371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 29469371c9d4SSatish Balay v2 += 2; 2947f0d39aaaSBarry Smith } 2948f0d39aaaSBarry Smith 2949f0d39aaaSBarry Smith if (n == sz - 1) { 2950f0d39aaaSBarry Smith tmp0 = x[*idx]; 2951f0d39aaaSBarry Smith sum1 -= v1[0] * tmp0; 2952f0d39aaaSBarry Smith sum2 -= v2[0] * tmp0; 2953f0d39aaaSBarry Smith } 29545850ef23SBarry Smith t[row] = sum1; 29555850ef23SBarry Smith t[row + 1] = sum2; 2956f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[0] + sum2 * ibdiag[2]; 2957f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[1] + sum2 * ibdiag[3]; 2958f0d39aaaSBarry Smith ibdiag += 4; 2959f0d39aaaSBarry Smith break; 2960f0d39aaaSBarry Smith case 3: 2961f0d39aaaSBarry Smith v2 = a->a + ii[row + 1]; 2962f0d39aaaSBarry Smith v3 = a->a + ii[row + 2]; 2963f0d39aaaSBarry Smith sum1 = b[row]; 2964f0d39aaaSBarry Smith sum2 = b[row + 1]; 2965f0d39aaaSBarry Smith sum3 = b[row + 2]; 2966f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 2967f0d39aaaSBarry Smith i1 = idx[0]; 2968f0d39aaaSBarry Smith i2 = idx[1]; 2969f0d39aaaSBarry Smith idx += 2; 2970f0d39aaaSBarry Smith tmp0 = x[i1]; 2971f0d39aaaSBarry Smith tmp1 = x[i2]; 29729371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 29739371c9d4SSatish Balay v1 += 2; 29749371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 29759371c9d4SSatish Balay v2 += 2; 29769371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 29779371c9d4SSatish Balay v3 += 2; 2978f0d39aaaSBarry Smith } 2979f0d39aaaSBarry Smith 2980f0d39aaaSBarry Smith if (n == sz - 1) { 2981f0d39aaaSBarry Smith tmp0 = x[*idx]; 2982f0d39aaaSBarry Smith sum1 -= v1[0] * tmp0; 2983f0d39aaaSBarry Smith sum2 -= v2[0] * tmp0; 2984f0d39aaaSBarry Smith sum3 -= v3[0] * tmp0; 2985f0d39aaaSBarry Smith } 29865850ef23SBarry Smith t[row] = sum1; 29875850ef23SBarry Smith t[row + 1] = sum2; 29885850ef23SBarry Smith t[row + 2] = sum3; 2989f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[0] + sum2 * ibdiag[3] + sum3 * ibdiag[6]; 2990f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[1] + sum2 * ibdiag[4] + sum3 * ibdiag[7]; 2991f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[2] + sum2 * ibdiag[5] + sum3 * ibdiag[8]; 2992f0d39aaaSBarry Smith ibdiag += 9; 2993f0d39aaaSBarry Smith break; 2994f0d39aaaSBarry Smith case 4: 2995f0d39aaaSBarry Smith v2 = a->a + ii[row + 1]; 2996f0d39aaaSBarry Smith v3 = a->a + ii[row + 2]; 2997f0d39aaaSBarry Smith v4 = a->a + ii[row + 3]; 2998f0d39aaaSBarry Smith sum1 = b[row]; 2999f0d39aaaSBarry Smith sum2 = b[row + 1]; 3000f0d39aaaSBarry Smith sum3 = b[row + 2]; 3001f0d39aaaSBarry Smith sum4 = b[row + 3]; 3002f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 3003f0d39aaaSBarry Smith i1 = idx[0]; 3004f0d39aaaSBarry Smith i2 = idx[1]; 3005f0d39aaaSBarry Smith idx += 2; 3006f0d39aaaSBarry Smith tmp0 = x[i1]; 3007f0d39aaaSBarry Smith tmp1 = x[i2]; 30089371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 30099371c9d4SSatish Balay v1 += 2; 30109371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 30119371c9d4SSatish Balay v2 += 2; 30129371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 30139371c9d4SSatish Balay v3 += 2; 30149371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 30159371c9d4SSatish Balay v4 += 2; 3016f0d39aaaSBarry Smith } 3017f0d39aaaSBarry Smith 3018f0d39aaaSBarry Smith if (n == sz - 1) { 3019f0d39aaaSBarry Smith tmp0 = x[*idx]; 3020f0d39aaaSBarry Smith sum1 -= v1[0] * tmp0; 3021f0d39aaaSBarry Smith sum2 -= v2[0] * tmp0; 3022f0d39aaaSBarry Smith sum3 -= v3[0] * tmp0; 3023f0d39aaaSBarry Smith sum4 -= v4[0] * tmp0; 3024f0d39aaaSBarry Smith } 30255850ef23SBarry Smith t[row] = sum1; 30265850ef23SBarry Smith t[row + 1] = sum2; 30275850ef23SBarry Smith t[row + 2] = sum3; 30285850ef23SBarry Smith t[row + 3] = sum4; 3029f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[0] + sum2 * ibdiag[4] + sum3 * ibdiag[8] + sum4 * ibdiag[12]; 3030f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[1] + sum2 * ibdiag[5] + sum3 * ibdiag[9] + sum4 * ibdiag[13]; 3031f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[2] + sum2 * ibdiag[6] + sum3 * ibdiag[10] + sum4 * ibdiag[14]; 3032f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[3] + sum2 * ibdiag[7] + sum3 * ibdiag[11] + sum4 * ibdiag[15]; 3033f0d39aaaSBarry Smith ibdiag += 16; 3034f0d39aaaSBarry Smith break; 3035f0d39aaaSBarry Smith case 5: 3036f0d39aaaSBarry Smith v2 = a->a + ii[row + 1]; 3037f0d39aaaSBarry Smith v3 = a->a + ii[row + 2]; 3038f0d39aaaSBarry Smith v4 = a->a + ii[row + 3]; 3039f0d39aaaSBarry Smith v5 = a->a + ii[row + 4]; 3040f0d39aaaSBarry Smith sum1 = b[row]; 3041f0d39aaaSBarry Smith sum2 = b[row + 1]; 3042f0d39aaaSBarry Smith sum3 = b[row + 2]; 3043f0d39aaaSBarry Smith sum4 = b[row + 3]; 3044f0d39aaaSBarry Smith sum5 = b[row + 4]; 3045f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 3046f0d39aaaSBarry Smith i1 = idx[0]; 3047f0d39aaaSBarry Smith i2 = idx[1]; 3048f0d39aaaSBarry Smith idx += 2; 3049f0d39aaaSBarry Smith tmp0 = x[i1]; 3050f0d39aaaSBarry Smith tmp1 = x[i2]; 30519371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 30529371c9d4SSatish Balay v1 += 2; 30539371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 30549371c9d4SSatish Balay v2 += 2; 30559371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 30569371c9d4SSatish Balay v3 += 2; 30579371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 30589371c9d4SSatish Balay v4 += 2; 30599371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 30609371c9d4SSatish Balay v5 += 2; 3061f0d39aaaSBarry Smith } 3062f0d39aaaSBarry Smith 3063f0d39aaaSBarry Smith if (n == sz - 1) { 3064f0d39aaaSBarry Smith tmp0 = x[*idx]; 3065f0d39aaaSBarry Smith sum1 -= v1[0] * tmp0; 3066f0d39aaaSBarry Smith sum2 -= v2[0] * tmp0; 3067f0d39aaaSBarry Smith sum3 -= v3[0] * tmp0; 3068f0d39aaaSBarry Smith sum4 -= v4[0] * tmp0; 3069f0d39aaaSBarry Smith sum5 -= v5[0] * tmp0; 3070f0d39aaaSBarry Smith } 30715850ef23SBarry Smith t[row] = sum1; 30725850ef23SBarry Smith t[row + 1] = sum2; 30735850ef23SBarry Smith t[row + 2] = sum3; 30745850ef23SBarry Smith t[row + 3] = sum4; 30755850ef23SBarry Smith t[row + 4] = sum5; 3076f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[0] + sum2 * ibdiag[5] + sum3 * ibdiag[10] + sum4 * ibdiag[15] + sum5 * ibdiag[20]; 3077f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[1] + sum2 * ibdiag[6] + sum3 * ibdiag[11] + sum4 * ibdiag[16] + sum5 * ibdiag[21]; 3078f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[2] + sum2 * ibdiag[7] + sum3 * ibdiag[12] + sum4 * ibdiag[17] + sum5 * ibdiag[22]; 3079f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[3] + sum2 * ibdiag[8] + sum3 * ibdiag[13] + sum4 * ibdiag[18] + sum5 * ibdiag[23]; 3080f0d39aaaSBarry Smith x[row++] = sum1 * ibdiag[4] + sum2 * ibdiag[9] + sum3 * ibdiag[14] + sum4 * ibdiag[19] + sum5 * ibdiag[24]; 3081f0d39aaaSBarry Smith ibdiag += 25; 3082f0d39aaaSBarry Smith break; 3083d71ae5a4SJacob Faibussowitsch default: 3084d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Inode size %" PetscInt_FMT " not supported", sizes[i]); 30858862d2efSBarry Smith } 30862af78befSBarry Smith } 30872af78befSBarry Smith 30885850ef23SBarry Smith xb = t; 30899566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(a->nz)); 30902af78befSBarry Smith } else xb = b; 30912af78befSBarry Smith if (flag & SOR_BACKWARD_SWEEP || flag & SOR_LOCAL_BACKWARD_SWEEP) { 3092f0d39aaaSBarry Smith ibdiag = a->inode.ibdiag + a->inode.bdiagsize; 3093d0f46423SBarry Smith for (i = m - 1, row = A->rmap->n - 1; i >= 0; i--) { 3094f0d39aaaSBarry Smith ibdiag -= sizes[i] * sizes[i]; 30958862d2efSBarry Smith sz = ii[row + 1] - diag[row] - 1; 30968862d2efSBarry Smith v1 = a->a + diag[row] + 1; 30978862d2efSBarry Smith idx = a->j + diag[row] + 1; 30982af78befSBarry Smith 30994108e4d5SBarry Smith /* see comments for MatMult_SeqAIJ_Inode() for how this is coded */ 31008862d2efSBarry Smith switch (sizes[i]) { 31018862d2efSBarry Smith case 1: 31028862d2efSBarry Smith 31038862d2efSBarry Smith sum1 = xb[row]; 31048862d2efSBarry Smith for (n = 0; n < sz - 1; n += 2) { 31058862d2efSBarry Smith i1 = idx[0]; 31068862d2efSBarry Smith i2 = idx[1]; 31078862d2efSBarry Smith idx += 2; 31088862d2efSBarry Smith tmp0 = x[i1]; 31098862d2efSBarry Smith tmp1 = x[i2]; 31109371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 31119371c9d4SSatish Balay v1 += 2; 31128862d2efSBarry Smith } 31138862d2efSBarry Smith 31148862d2efSBarry Smith if (n == sz - 1) { 3115f0d39aaaSBarry Smith tmp0 = x[*idx]; 3116f0d39aaaSBarry Smith sum1 -= *v1 * tmp0; 31178862d2efSBarry Smith } 3118f0d39aaaSBarry Smith x[row--] = sum1 * (*ibdiag); 3119f0d39aaaSBarry Smith break; 3120f0d39aaaSBarry Smith 3121f0d39aaaSBarry Smith case 2: 3122f0d39aaaSBarry Smith 3123f0d39aaaSBarry Smith sum1 = xb[row]; 3124f0d39aaaSBarry Smith sum2 = xb[row - 1]; 3125f0d39aaaSBarry Smith /* note that sum1 is associated with the second of the two rows */ 3126f0d39aaaSBarry Smith v2 = a->a + diag[row - 1] + 2; 3127f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 3128f0d39aaaSBarry Smith i1 = idx[0]; 3129f0d39aaaSBarry Smith i2 = idx[1]; 3130f0d39aaaSBarry Smith idx += 2; 3131f0d39aaaSBarry Smith tmp0 = x[i1]; 3132f0d39aaaSBarry Smith tmp1 = x[i2]; 31339371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 31349371c9d4SSatish Balay v1 += 2; 31359371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 31369371c9d4SSatish Balay v2 += 2; 3137f0d39aaaSBarry Smith } 3138f0d39aaaSBarry Smith 3139f0d39aaaSBarry Smith if (n == sz - 1) { 3140f0d39aaaSBarry Smith tmp0 = x[*idx]; 3141f0d39aaaSBarry Smith sum1 -= *v1 * tmp0; 3142f0d39aaaSBarry Smith sum2 -= *v2 * tmp0; 3143f0d39aaaSBarry Smith } 3144f0d39aaaSBarry Smith x[row--] = sum2 * ibdiag[1] + sum1 * ibdiag[3]; 3145f0d39aaaSBarry Smith x[row--] = sum2 * ibdiag[0] + sum1 * ibdiag[2]; 3146f0d39aaaSBarry Smith break; 3147f0d39aaaSBarry Smith case 3: 3148f0d39aaaSBarry Smith 3149f0d39aaaSBarry Smith sum1 = xb[row]; 3150f0d39aaaSBarry Smith sum2 = xb[row - 1]; 3151f0d39aaaSBarry Smith sum3 = xb[row - 2]; 3152f0d39aaaSBarry Smith v2 = a->a + diag[row - 1] + 2; 3153f0d39aaaSBarry Smith v3 = a->a + diag[row - 2] + 3; 3154f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 3155f0d39aaaSBarry Smith i1 = idx[0]; 3156f0d39aaaSBarry Smith i2 = idx[1]; 3157f0d39aaaSBarry Smith idx += 2; 3158f0d39aaaSBarry Smith tmp0 = x[i1]; 3159f0d39aaaSBarry Smith tmp1 = x[i2]; 31609371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 31619371c9d4SSatish Balay v1 += 2; 31629371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 31639371c9d4SSatish Balay v2 += 2; 31649371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 31659371c9d4SSatish Balay v3 += 2; 3166f0d39aaaSBarry Smith } 3167f0d39aaaSBarry Smith 3168f0d39aaaSBarry Smith if (n == sz - 1) { 3169f0d39aaaSBarry Smith tmp0 = x[*idx]; 3170f0d39aaaSBarry Smith sum1 -= *v1 * tmp0; 3171f0d39aaaSBarry Smith sum2 -= *v2 * tmp0; 3172f0d39aaaSBarry Smith sum3 -= *v3 * tmp0; 3173f0d39aaaSBarry Smith } 3174f0d39aaaSBarry Smith x[row--] = sum3 * ibdiag[2] + sum2 * ibdiag[5] + sum1 * ibdiag[8]; 3175f0d39aaaSBarry Smith x[row--] = sum3 * ibdiag[1] + sum2 * ibdiag[4] + sum1 * ibdiag[7]; 3176f0d39aaaSBarry Smith x[row--] = sum3 * ibdiag[0] + sum2 * ibdiag[3] + sum1 * ibdiag[6]; 3177f0d39aaaSBarry Smith break; 3178f0d39aaaSBarry Smith case 4: 3179f0d39aaaSBarry Smith 3180f0d39aaaSBarry Smith sum1 = xb[row]; 3181f0d39aaaSBarry Smith sum2 = xb[row - 1]; 3182f0d39aaaSBarry Smith sum3 = xb[row - 2]; 3183f0d39aaaSBarry Smith sum4 = xb[row - 3]; 3184f0d39aaaSBarry Smith v2 = a->a + diag[row - 1] + 2; 3185f0d39aaaSBarry Smith v3 = a->a + diag[row - 2] + 3; 3186f0d39aaaSBarry Smith v4 = a->a + diag[row - 3] + 4; 3187f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 3188f0d39aaaSBarry Smith i1 = idx[0]; 3189f0d39aaaSBarry Smith i2 = idx[1]; 3190f0d39aaaSBarry Smith idx += 2; 3191f0d39aaaSBarry Smith tmp0 = x[i1]; 3192f0d39aaaSBarry Smith tmp1 = x[i2]; 31939371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 31949371c9d4SSatish Balay v1 += 2; 31959371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 31969371c9d4SSatish Balay v2 += 2; 31979371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 31989371c9d4SSatish Balay v3 += 2; 31999371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 32009371c9d4SSatish Balay v4 += 2; 3201f0d39aaaSBarry Smith } 3202f0d39aaaSBarry Smith 3203f0d39aaaSBarry Smith if (n == sz - 1) { 3204f0d39aaaSBarry Smith tmp0 = x[*idx]; 3205f0d39aaaSBarry Smith sum1 -= *v1 * tmp0; 3206f0d39aaaSBarry Smith sum2 -= *v2 * tmp0; 3207f0d39aaaSBarry Smith sum3 -= *v3 * tmp0; 3208f0d39aaaSBarry Smith sum4 -= *v4 * tmp0; 3209f0d39aaaSBarry Smith } 3210f0d39aaaSBarry Smith x[row--] = sum4 * ibdiag[3] + sum3 * ibdiag[7] + sum2 * ibdiag[11] + sum1 * ibdiag[15]; 3211f0d39aaaSBarry Smith x[row--] = sum4 * ibdiag[2] + sum3 * ibdiag[6] + sum2 * ibdiag[10] + sum1 * ibdiag[14]; 3212f0d39aaaSBarry Smith x[row--] = sum4 * ibdiag[1] + sum3 * ibdiag[5] + sum2 * ibdiag[9] + sum1 * ibdiag[13]; 3213f0d39aaaSBarry Smith x[row--] = sum4 * ibdiag[0] + sum3 * ibdiag[4] + sum2 * ibdiag[8] + sum1 * ibdiag[12]; 3214f0d39aaaSBarry Smith break; 3215f0d39aaaSBarry Smith case 5: 3216f0d39aaaSBarry Smith 3217f0d39aaaSBarry Smith sum1 = xb[row]; 3218f0d39aaaSBarry Smith sum2 = xb[row - 1]; 3219f0d39aaaSBarry Smith sum3 = xb[row - 2]; 3220f0d39aaaSBarry Smith sum4 = xb[row - 3]; 3221f0d39aaaSBarry Smith sum5 = xb[row - 4]; 3222f0d39aaaSBarry Smith v2 = a->a + diag[row - 1] + 2; 3223f0d39aaaSBarry Smith v3 = a->a + diag[row - 2] + 3; 3224f0d39aaaSBarry Smith v4 = a->a + diag[row - 3] + 4; 3225f0d39aaaSBarry Smith v5 = a->a + diag[row - 4] + 5; 3226f0d39aaaSBarry Smith for (n = 0; n < sz - 1; n += 2) { 3227f0d39aaaSBarry Smith i1 = idx[0]; 3228f0d39aaaSBarry Smith i2 = idx[1]; 3229f0d39aaaSBarry Smith idx += 2; 3230f0d39aaaSBarry Smith tmp0 = x[i1]; 3231f0d39aaaSBarry Smith tmp1 = x[i2]; 32329371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 32339371c9d4SSatish Balay v1 += 2; 32349371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 32359371c9d4SSatish Balay v2 += 2; 32369371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 32379371c9d4SSatish Balay v3 += 2; 32389371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 32399371c9d4SSatish Balay v4 += 2; 32409371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 32419371c9d4SSatish Balay v5 += 2; 3242f0d39aaaSBarry Smith } 3243f0d39aaaSBarry Smith 3244f0d39aaaSBarry Smith if (n == sz - 1) { 3245f0d39aaaSBarry Smith tmp0 = x[*idx]; 3246f0d39aaaSBarry Smith sum1 -= *v1 * tmp0; 3247f0d39aaaSBarry Smith sum2 -= *v2 * tmp0; 3248f0d39aaaSBarry Smith sum3 -= *v3 * tmp0; 3249f0d39aaaSBarry Smith sum4 -= *v4 * tmp0; 3250f0d39aaaSBarry Smith sum5 -= *v5 * tmp0; 3251f0d39aaaSBarry Smith } 3252f0d39aaaSBarry Smith x[row--] = sum5 * ibdiag[4] + sum4 * ibdiag[9] + sum3 * ibdiag[14] + sum2 * ibdiag[19] + sum1 * ibdiag[24]; 3253f0d39aaaSBarry Smith x[row--] = sum5 * ibdiag[3] + sum4 * ibdiag[8] + sum3 * ibdiag[13] + sum2 * ibdiag[18] + sum1 * ibdiag[23]; 3254f0d39aaaSBarry Smith x[row--] = sum5 * ibdiag[2] + sum4 * ibdiag[7] + sum3 * ibdiag[12] + sum2 * ibdiag[17] + sum1 * ibdiag[22]; 3255f0d39aaaSBarry Smith x[row--] = sum5 * ibdiag[1] + sum4 * ibdiag[6] + sum3 * ibdiag[11] + sum2 * ibdiag[16] + sum1 * ibdiag[21]; 3256f0d39aaaSBarry Smith x[row--] = sum5 * ibdiag[0] + sum4 * ibdiag[5] + sum3 * ibdiag[10] + sum2 * ibdiag[15] + sum1 * ibdiag[20]; 32578862d2efSBarry Smith break; 3258d71ae5a4SJacob Faibussowitsch default: 3259d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Inode size %" PetscInt_FMT " not supported", sizes[i]); 32608862d2efSBarry Smith } 32612af78befSBarry Smith } 32622af78befSBarry Smith 32639566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(a->nz)); 32642af78befSBarry Smith } 32652af78befSBarry Smith its--; 32665850ef23SBarry Smith } 32675850ef23SBarry Smith while (its--) { 32685850ef23SBarry Smith if (flag & SOR_FORWARD_SWEEP || flag & SOR_LOCAL_FORWARD_SWEEP) { 32699371c9d4SSatish Balay for (i = 0, row = 0, ibdiag = a->inode.ibdiag; i < m; row += sizes[i], ibdiag += sizes[i] * sizes[i], i++) { 3270d876e2b0SMark Adams sz = diag[row] - ii[row]; 32715850ef23SBarry Smith v1 = a->a + ii[row]; 32725850ef23SBarry Smith idx = a->j + ii[row]; 32735850ef23SBarry Smith /* see comments for MatMult_SeqAIJ_Inode() for how this is coded */ 32745850ef23SBarry Smith switch (sizes[i]) { 32755850ef23SBarry Smith case 1: 32765850ef23SBarry Smith sum1 = b[row]; 32775850ef23SBarry Smith for (n = 0; n < sz - 1; n += 2) { 32785850ef23SBarry Smith i1 = idx[0]; 32795850ef23SBarry Smith i2 = idx[1]; 32805850ef23SBarry Smith idx += 2; 32815850ef23SBarry Smith tmp0 = x[i1]; 32825850ef23SBarry Smith tmp1 = x[i2]; 32839371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 32849371c9d4SSatish Balay v1 += 2; 32855850ef23SBarry Smith } 32865850ef23SBarry Smith if (n == sz - 1) { 3287d876e2b0SMark Adams tmp0 = x[*idx++]; 3288d876e2b0SMark Adams sum1 -= *v1 * tmp0; 3289d876e2b0SMark Adams v1++; 3290d876e2b0SMark Adams } 3291d876e2b0SMark Adams t[row] = sum1; 3292d876e2b0SMark Adams sz = ii[row + 1] - diag[row] - 1; 3293d876e2b0SMark Adams idx = a->j + diag[row] + 1; 3294d876e2b0SMark Adams v1 += 1; 3295d876e2b0SMark Adams for (n = 0; n < sz - 1; n += 2) { 3296d876e2b0SMark Adams i1 = idx[0]; 3297d876e2b0SMark Adams i2 = idx[1]; 3298d876e2b0SMark Adams idx += 2; 3299d876e2b0SMark Adams tmp0 = x[i1]; 3300d876e2b0SMark Adams tmp1 = x[i2]; 33019371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 33029371c9d4SSatish Balay v1 += 2; 3303d876e2b0SMark Adams } 3304d876e2b0SMark Adams if (n == sz - 1) { 3305d876e2b0SMark Adams tmp0 = x[*idx++]; 33065850ef23SBarry Smith sum1 -= *v1 * tmp0; 33075850ef23SBarry Smith } 33085850ef23SBarry Smith /* in MatSOR_SeqAIJ this line would be 33095850ef23SBarry Smith * 33105850ef23SBarry Smith * x[row] = (1-omega)*x[row]+(sum1+(*bdiag++)*x[row])*(*ibdiag++); 33115850ef23SBarry Smith * 33125850ef23SBarry Smith * but omega == 1, so this becomes 33135850ef23SBarry Smith * 3314d876e2b0SMark Adams * x[row] = sum1*(*ibdiag++); 33155850ef23SBarry Smith * 33165850ef23SBarry Smith */ 3317d876e2b0SMark Adams x[row] = sum1 * (*ibdiag); 33185850ef23SBarry Smith break; 33195850ef23SBarry Smith case 2: 33205850ef23SBarry Smith v2 = a->a + ii[row + 1]; 33215850ef23SBarry Smith sum1 = b[row]; 33225850ef23SBarry Smith sum2 = b[row + 1]; 33235850ef23SBarry Smith for (n = 0; n < sz - 1; n += 2) { 33245850ef23SBarry Smith i1 = idx[0]; 33255850ef23SBarry Smith i2 = idx[1]; 33265850ef23SBarry Smith idx += 2; 33275850ef23SBarry Smith tmp0 = x[i1]; 33285850ef23SBarry Smith tmp1 = x[i2]; 33299371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 33309371c9d4SSatish Balay v1 += 2; 33319371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 33329371c9d4SSatish Balay v2 += 2; 33335850ef23SBarry Smith } 3334d876e2b0SMark Adams if (n == sz - 1) { 3335d876e2b0SMark Adams tmp0 = x[*idx++]; 3336d876e2b0SMark Adams sum1 -= v1[0] * tmp0; 3337d876e2b0SMark Adams sum2 -= v2[0] * tmp0; 33389371c9d4SSatish Balay v1++; 33399371c9d4SSatish Balay v2++; 3340d876e2b0SMark Adams } 3341d876e2b0SMark Adams t[row] = sum1; 3342d876e2b0SMark Adams t[row + 1] = sum2; 3343d876e2b0SMark Adams sz = ii[row + 1] - diag[row] - 2; 3344d876e2b0SMark Adams idx = a->j + diag[row] + 2; 3345d876e2b0SMark Adams v1 += 2; 3346d876e2b0SMark Adams v2 += 2; 3347d876e2b0SMark Adams for (n = 0; n < sz - 1; n += 2) { 3348d876e2b0SMark Adams i1 = idx[0]; 3349d876e2b0SMark Adams i2 = idx[1]; 3350d876e2b0SMark Adams idx += 2; 3351d876e2b0SMark Adams tmp0 = x[i1]; 3352d876e2b0SMark Adams tmp1 = x[i2]; 33539371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 33549371c9d4SSatish Balay v1 += 2; 33559371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 33569371c9d4SSatish Balay v2 += 2; 3357d876e2b0SMark Adams } 33585850ef23SBarry Smith if (n == sz - 1) { 33595850ef23SBarry Smith tmp0 = x[*idx]; 33605850ef23SBarry Smith sum1 -= v1[0] * tmp0; 33615850ef23SBarry Smith sum2 -= v2[0] * tmp0; 33625850ef23SBarry Smith } 3363d876e2b0SMark Adams x[row] = sum1 * ibdiag[0] + sum2 * ibdiag[2]; 3364d876e2b0SMark Adams x[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[3]; 33655850ef23SBarry Smith break; 33665850ef23SBarry Smith case 3: 33675850ef23SBarry Smith v2 = a->a + ii[row + 1]; 33685850ef23SBarry Smith v3 = a->a + ii[row + 2]; 33695850ef23SBarry Smith sum1 = b[row]; 33705850ef23SBarry Smith sum2 = b[row + 1]; 33715850ef23SBarry Smith sum3 = b[row + 2]; 33725850ef23SBarry Smith for (n = 0; n < sz - 1; n += 2) { 33735850ef23SBarry Smith i1 = idx[0]; 33745850ef23SBarry Smith i2 = idx[1]; 33755850ef23SBarry Smith idx += 2; 33765850ef23SBarry Smith tmp0 = x[i1]; 33775850ef23SBarry Smith tmp1 = x[i2]; 33789371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 33799371c9d4SSatish Balay v1 += 2; 33809371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 33819371c9d4SSatish Balay v2 += 2; 33829371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 33839371c9d4SSatish Balay v3 += 2; 33845850ef23SBarry Smith } 3385d876e2b0SMark Adams if (n == sz - 1) { 3386d876e2b0SMark Adams tmp0 = x[*idx++]; 3387d876e2b0SMark Adams sum1 -= v1[0] * tmp0; 3388d876e2b0SMark Adams sum2 -= v2[0] * tmp0; 3389d876e2b0SMark Adams sum3 -= v3[0] * tmp0; 33909371c9d4SSatish Balay v1++; 33919371c9d4SSatish Balay v2++; 33929371c9d4SSatish Balay v3++; 3393d876e2b0SMark Adams } 3394d876e2b0SMark Adams t[row] = sum1; 3395d876e2b0SMark Adams t[row + 1] = sum2; 3396d876e2b0SMark Adams t[row + 2] = sum3; 3397d876e2b0SMark Adams sz = ii[row + 1] - diag[row] - 3; 3398d876e2b0SMark Adams idx = a->j + diag[row] + 3; 3399d876e2b0SMark Adams v1 += 3; 3400d876e2b0SMark Adams v2 += 3; 3401d876e2b0SMark Adams v3 += 3; 3402d876e2b0SMark Adams for (n = 0; n < sz - 1; n += 2) { 3403d876e2b0SMark Adams i1 = idx[0]; 3404d876e2b0SMark Adams i2 = idx[1]; 3405d876e2b0SMark Adams idx += 2; 3406d876e2b0SMark Adams tmp0 = x[i1]; 3407d876e2b0SMark Adams tmp1 = x[i2]; 34089371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 34099371c9d4SSatish Balay v1 += 2; 34109371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 34119371c9d4SSatish Balay v2 += 2; 34129371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 34139371c9d4SSatish Balay v3 += 2; 3414d876e2b0SMark Adams } 34155850ef23SBarry Smith if (n == sz - 1) { 34165850ef23SBarry Smith tmp0 = x[*idx]; 34175850ef23SBarry Smith sum1 -= v1[0] * tmp0; 34185850ef23SBarry Smith sum2 -= v2[0] * tmp0; 34195850ef23SBarry Smith sum3 -= v3[0] * tmp0; 34205850ef23SBarry Smith } 3421d876e2b0SMark Adams x[row] = sum1 * ibdiag[0] + sum2 * ibdiag[3] + sum3 * ibdiag[6]; 3422d876e2b0SMark Adams x[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[4] + sum3 * ibdiag[7]; 3423d876e2b0SMark Adams x[row + 2] = sum1 * ibdiag[2] + sum2 * ibdiag[5] + sum3 * ibdiag[8]; 34245850ef23SBarry Smith break; 34255850ef23SBarry Smith case 4: 34265850ef23SBarry Smith v2 = a->a + ii[row + 1]; 34275850ef23SBarry Smith v3 = a->a + ii[row + 2]; 34285850ef23SBarry Smith v4 = a->a + ii[row + 3]; 34295850ef23SBarry Smith sum1 = b[row]; 34305850ef23SBarry Smith sum2 = b[row + 1]; 34315850ef23SBarry Smith sum3 = b[row + 2]; 34325850ef23SBarry Smith sum4 = b[row + 3]; 34335850ef23SBarry Smith for (n = 0; n < sz - 1; n += 2) { 34345850ef23SBarry Smith i1 = idx[0]; 34355850ef23SBarry Smith i2 = idx[1]; 34365850ef23SBarry Smith idx += 2; 34375850ef23SBarry Smith tmp0 = x[i1]; 34385850ef23SBarry Smith tmp1 = x[i2]; 34399371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 34409371c9d4SSatish Balay v1 += 2; 34419371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 34429371c9d4SSatish Balay v2 += 2; 34439371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 34449371c9d4SSatish Balay v3 += 2; 34459371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 34469371c9d4SSatish Balay v4 += 2; 34475850ef23SBarry Smith } 3448d876e2b0SMark Adams if (n == sz - 1) { 3449d876e2b0SMark Adams tmp0 = x[*idx++]; 3450d876e2b0SMark Adams sum1 -= v1[0] * tmp0; 3451d876e2b0SMark Adams sum2 -= v2[0] * tmp0; 3452d876e2b0SMark Adams sum3 -= v3[0] * tmp0; 3453d876e2b0SMark Adams sum4 -= v4[0] * tmp0; 34549371c9d4SSatish Balay v1++; 34559371c9d4SSatish Balay v2++; 34569371c9d4SSatish Balay v3++; 34579371c9d4SSatish Balay v4++; 3458d876e2b0SMark Adams } 3459d876e2b0SMark Adams t[row] = sum1; 3460d876e2b0SMark Adams t[row + 1] = sum2; 3461d876e2b0SMark Adams t[row + 2] = sum3; 3462d876e2b0SMark Adams t[row + 3] = sum4; 3463d876e2b0SMark Adams sz = ii[row + 1] - diag[row] - 4; 3464d876e2b0SMark Adams idx = a->j + diag[row] + 4; 3465d876e2b0SMark Adams v1 += 4; 3466d876e2b0SMark Adams v2 += 4; 3467d876e2b0SMark Adams v3 += 4; 3468d876e2b0SMark Adams v4 += 4; 3469d876e2b0SMark Adams for (n = 0; n < sz - 1; n += 2) { 3470d876e2b0SMark Adams i1 = idx[0]; 3471d876e2b0SMark Adams i2 = idx[1]; 3472d876e2b0SMark Adams idx += 2; 3473d876e2b0SMark Adams tmp0 = x[i1]; 3474d876e2b0SMark Adams tmp1 = x[i2]; 34759371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 34769371c9d4SSatish Balay v1 += 2; 34779371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 34789371c9d4SSatish Balay v2 += 2; 34799371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 34809371c9d4SSatish Balay v3 += 2; 34819371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 34829371c9d4SSatish Balay v4 += 2; 3483d876e2b0SMark Adams } 34845850ef23SBarry Smith if (n == sz - 1) { 34855850ef23SBarry Smith tmp0 = x[*idx]; 34865850ef23SBarry Smith sum1 -= v1[0] * tmp0; 34875850ef23SBarry Smith sum2 -= v2[0] * tmp0; 34885850ef23SBarry Smith sum3 -= v3[0] * tmp0; 34895850ef23SBarry Smith sum4 -= v4[0] * tmp0; 34905850ef23SBarry Smith } 3491d876e2b0SMark Adams x[row] = sum1 * ibdiag[0] + sum2 * ibdiag[4] + sum3 * ibdiag[8] + sum4 * ibdiag[12]; 3492d876e2b0SMark Adams x[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[5] + sum3 * ibdiag[9] + sum4 * ibdiag[13]; 3493d876e2b0SMark Adams x[row + 2] = sum1 * ibdiag[2] + sum2 * ibdiag[6] + sum3 * ibdiag[10] + sum4 * ibdiag[14]; 3494d876e2b0SMark Adams x[row + 3] = sum1 * ibdiag[3] + sum2 * ibdiag[7] + sum3 * ibdiag[11] + sum4 * ibdiag[15]; 34955850ef23SBarry Smith break; 34965850ef23SBarry Smith case 5: 34975850ef23SBarry Smith v2 = a->a + ii[row + 1]; 34985850ef23SBarry Smith v3 = a->a + ii[row + 2]; 34995850ef23SBarry Smith v4 = a->a + ii[row + 3]; 35005850ef23SBarry Smith v5 = a->a + ii[row + 4]; 35015850ef23SBarry Smith sum1 = b[row]; 35025850ef23SBarry Smith sum2 = b[row + 1]; 35035850ef23SBarry Smith sum3 = b[row + 2]; 35045850ef23SBarry Smith sum4 = b[row + 3]; 35055850ef23SBarry Smith sum5 = b[row + 4]; 35065850ef23SBarry Smith for (n = 0; n < sz - 1; n += 2) { 35075850ef23SBarry Smith i1 = idx[0]; 35085850ef23SBarry Smith i2 = idx[1]; 35095850ef23SBarry Smith idx += 2; 35105850ef23SBarry Smith tmp0 = x[i1]; 35115850ef23SBarry Smith tmp1 = x[i2]; 35129371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 35139371c9d4SSatish Balay v1 += 2; 35149371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 35159371c9d4SSatish Balay v2 += 2; 35169371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 35179371c9d4SSatish Balay v3 += 2; 35189371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 35199371c9d4SSatish Balay v4 += 2; 35209371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 35219371c9d4SSatish Balay v5 += 2; 35225850ef23SBarry Smith } 35235850ef23SBarry Smith if (n == sz - 1) { 3524d876e2b0SMark Adams tmp0 = x[*idx++]; 35255850ef23SBarry Smith sum1 -= v1[0] * tmp0; 35265850ef23SBarry Smith sum2 -= v2[0] * tmp0; 35275850ef23SBarry Smith sum3 -= v3[0] * tmp0; 35285850ef23SBarry Smith sum4 -= v4[0] * tmp0; 35295850ef23SBarry Smith sum5 -= v5[0] * tmp0; 35309371c9d4SSatish Balay v1++; 35319371c9d4SSatish Balay v2++; 35329371c9d4SSatish Balay v3++; 35339371c9d4SSatish Balay v4++; 35349371c9d4SSatish Balay v5++; 35355850ef23SBarry Smith } 3536d876e2b0SMark Adams t[row] = sum1; 3537d876e2b0SMark Adams t[row + 1] = sum2; 3538d876e2b0SMark Adams t[row + 2] = sum3; 3539d876e2b0SMark Adams t[row + 3] = sum4; 3540d876e2b0SMark Adams t[row + 4] = sum5; 3541d876e2b0SMark Adams sz = ii[row + 1] - diag[row] - 5; 3542d876e2b0SMark Adams idx = a->j + diag[row] + 5; 3543d876e2b0SMark Adams v1 += 5; 3544d876e2b0SMark Adams v2 += 5; 3545d876e2b0SMark Adams v3 += 5; 3546d876e2b0SMark Adams v4 += 5; 3547d876e2b0SMark Adams v5 += 5; 35485850ef23SBarry Smith for (n = 0; n < sz - 1; n += 2) { 35495850ef23SBarry Smith i1 = idx[0]; 35505850ef23SBarry Smith i2 = idx[1]; 35515850ef23SBarry Smith idx += 2; 35525850ef23SBarry Smith tmp0 = x[i1]; 35535850ef23SBarry Smith tmp1 = x[i2]; 35549371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 35559371c9d4SSatish Balay v1 += 2; 35569371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 35579371c9d4SSatish Balay v2 += 2; 35589371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 35599371c9d4SSatish Balay v3 += 2; 35609371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 35619371c9d4SSatish Balay v4 += 2; 35629371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 35639371c9d4SSatish Balay v5 += 2; 35645850ef23SBarry Smith } 35655850ef23SBarry Smith if (n == sz - 1) { 35665850ef23SBarry Smith tmp0 = x[*idx]; 3567d876e2b0SMark Adams sum1 -= v1[0] * tmp0; 3568d876e2b0SMark Adams sum2 -= v2[0] * tmp0; 3569d876e2b0SMark Adams sum3 -= v3[0] * tmp0; 3570d876e2b0SMark Adams sum4 -= v4[0] * tmp0; 3571d876e2b0SMark Adams sum5 -= v5[0] * tmp0; 35725850ef23SBarry Smith } 3573d876e2b0SMark Adams x[row] = sum1 * ibdiag[0] + sum2 * ibdiag[5] + sum3 * ibdiag[10] + sum4 * ibdiag[15] + sum5 * ibdiag[20]; 3574d876e2b0SMark Adams x[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[6] + sum3 * ibdiag[11] + sum4 * ibdiag[16] + sum5 * ibdiag[21]; 3575d876e2b0SMark Adams x[row + 2] = sum1 * ibdiag[2] + sum2 * ibdiag[7] + sum3 * ibdiag[12] + sum4 * ibdiag[17] + sum5 * ibdiag[22]; 3576d876e2b0SMark Adams x[row + 3] = sum1 * ibdiag[3] + sum2 * ibdiag[8] + sum3 * ibdiag[13] + sum4 * ibdiag[18] + sum5 * ibdiag[23]; 3577d876e2b0SMark Adams x[row + 4] = sum1 * ibdiag[4] + sum2 * ibdiag[9] + sum3 * ibdiag[14] + sum4 * ibdiag[19] + sum5 * ibdiag[24]; 3578d876e2b0SMark Adams break; 3579d71ae5a4SJacob Faibussowitsch default: 3580d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Inode size %" PetscInt_FMT " not supported", sizes[i]); 3581d876e2b0SMark Adams } 3582d876e2b0SMark Adams } 3583d876e2b0SMark Adams xb = t; 35849566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * a->nz)); /* undercounts diag inverse */ 3585d876e2b0SMark Adams } else xb = b; 3586d876e2b0SMark Adams 3587d876e2b0SMark Adams if (flag & SOR_BACKWARD_SWEEP || flag & SOR_LOCAL_BACKWARD_SWEEP) { 3588d876e2b0SMark Adams ibdiag = a->inode.ibdiag + a->inode.bdiagsize; 3589d876e2b0SMark Adams for (i = m - 1, row = A->rmap->n - 1; i >= 0; i--) { 3590d876e2b0SMark Adams ibdiag -= sizes[i] * sizes[i]; 3591d876e2b0SMark Adams 3592d876e2b0SMark Adams /* set RHS */ 3593d876e2b0SMark Adams if (xb == b) { 3594d876e2b0SMark Adams /* whole (old way) */ 3595d876e2b0SMark Adams sz = ii[row + 1] - ii[row]; 3596d876e2b0SMark Adams idx = a->j + ii[row]; 3597d876e2b0SMark Adams switch (sizes[i]) { 3598d71ae5a4SJacob Faibussowitsch case 5: 3599d71ae5a4SJacob Faibussowitsch v5 = a->a + ii[row - 4]; /* fall through */ 3600d71ae5a4SJacob Faibussowitsch case 4: 3601d71ae5a4SJacob Faibussowitsch v4 = a->a + ii[row - 3]; /* fall through */ 3602d71ae5a4SJacob Faibussowitsch case 3: 3603d71ae5a4SJacob Faibussowitsch v3 = a->a + ii[row - 2]; /* fall through */ 3604d71ae5a4SJacob Faibussowitsch case 2: 3605d71ae5a4SJacob Faibussowitsch v2 = a->a + ii[row - 1]; /* fall through */ 3606d71ae5a4SJacob Faibussowitsch case 1: 3607d71ae5a4SJacob Faibussowitsch v1 = a->a + ii[row]; 3608d71ae5a4SJacob Faibussowitsch break; 3609d71ae5a4SJacob Faibussowitsch default: 3610d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Inode size %" PetscInt_FMT " not supported", sizes[i]); 3611d876e2b0SMark Adams } 3612d876e2b0SMark Adams } else { 3613d876e2b0SMark Adams /* upper, no diag */ 3614d876e2b0SMark Adams sz = ii[row + 1] - diag[row] - 1; 3615d876e2b0SMark Adams idx = a->j + diag[row] + 1; 3616d876e2b0SMark Adams switch (sizes[i]) { 3617d71ae5a4SJacob Faibussowitsch case 5: 3618d71ae5a4SJacob Faibussowitsch v5 = a->a + diag[row - 4] + 5; /* fall through */ 3619d71ae5a4SJacob Faibussowitsch case 4: 3620d71ae5a4SJacob Faibussowitsch v4 = a->a + diag[row - 3] + 4; /* fall through */ 3621d71ae5a4SJacob Faibussowitsch case 3: 3622d71ae5a4SJacob Faibussowitsch v3 = a->a + diag[row - 2] + 3; /* fall through */ 3623d71ae5a4SJacob Faibussowitsch case 2: 3624d71ae5a4SJacob Faibussowitsch v2 = a->a + diag[row - 1] + 2; /* fall through */ 3625d71ae5a4SJacob Faibussowitsch case 1: 3626d71ae5a4SJacob Faibussowitsch v1 = a->a + diag[row] + 1; 3627d876e2b0SMark Adams } 3628d876e2b0SMark Adams } 3629d876e2b0SMark Adams /* set sum */ 3630d876e2b0SMark Adams switch (sizes[i]) { 3631d71ae5a4SJacob Faibussowitsch case 5: 3632d71ae5a4SJacob Faibussowitsch sum5 = xb[row - 4]; /* fall through */ 3633d71ae5a4SJacob Faibussowitsch case 4: 3634d71ae5a4SJacob Faibussowitsch sum4 = xb[row - 3]; /* fall through */ 3635d71ae5a4SJacob Faibussowitsch case 3: 3636d71ae5a4SJacob Faibussowitsch sum3 = xb[row - 2]; /* fall through */ 3637d71ae5a4SJacob Faibussowitsch case 2: 3638d71ae5a4SJacob Faibussowitsch sum2 = xb[row - 1]; /* fall through */ 3639d876e2b0SMark Adams case 1: 3640d876e2b0SMark Adams /* note that sum1 is associated with the last row */ 3641d876e2b0SMark Adams sum1 = xb[row]; 3642d876e2b0SMark Adams } 3643d876e2b0SMark Adams /* do sums */ 3644d876e2b0SMark Adams for (n = 0; n < sz - 1; n += 2) { 3645d876e2b0SMark Adams i1 = idx[0]; 3646d876e2b0SMark Adams i2 = idx[1]; 3647d876e2b0SMark Adams idx += 2; 3648d876e2b0SMark Adams tmp0 = x[i1]; 3649d876e2b0SMark Adams tmp1 = x[i2]; 3650d876e2b0SMark Adams switch (sizes[i]) { 3651d71ae5a4SJacob Faibussowitsch case 5: 3652d71ae5a4SJacob Faibussowitsch sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 3653d71ae5a4SJacob Faibussowitsch v5 += 2; /* fall through */ 3654d71ae5a4SJacob Faibussowitsch case 4: 3655d71ae5a4SJacob Faibussowitsch sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 3656d71ae5a4SJacob Faibussowitsch v4 += 2; /* fall through */ 3657d71ae5a4SJacob Faibussowitsch case 3: 3658d71ae5a4SJacob Faibussowitsch sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 3659d71ae5a4SJacob Faibussowitsch v3 += 2; /* fall through */ 3660d71ae5a4SJacob Faibussowitsch case 2: 3661d71ae5a4SJacob Faibussowitsch sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 3662d71ae5a4SJacob Faibussowitsch v2 += 2; /* fall through */ 3663d71ae5a4SJacob Faibussowitsch case 1: 3664d71ae5a4SJacob Faibussowitsch sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 3665d71ae5a4SJacob Faibussowitsch v1 += 2; 3666d876e2b0SMark Adams } 3667d876e2b0SMark Adams } 3668d876e2b0SMark Adams /* ragged edge */ 3669d876e2b0SMark Adams if (n == sz - 1) { 3670d876e2b0SMark Adams tmp0 = x[*idx]; 3671d876e2b0SMark Adams switch (sizes[i]) { 3672d71ae5a4SJacob Faibussowitsch case 5: 3673d71ae5a4SJacob Faibussowitsch sum5 -= *v5 * tmp0; /* fall through */ 3674d71ae5a4SJacob Faibussowitsch case 4: 3675d71ae5a4SJacob Faibussowitsch sum4 -= *v4 * tmp0; /* fall through */ 3676d71ae5a4SJacob Faibussowitsch case 3: 3677d71ae5a4SJacob Faibussowitsch sum3 -= *v3 * tmp0; /* fall through */ 3678d71ae5a4SJacob Faibussowitsch case 2: 3679d71ae5a4SJacob Faibussowitsch sum2 -= *v2 * tmp0; /* fall through */ 3680d71ae5a4SJacob Faibussowitsch case 1: 3681d71ae5a4SJacob Faibussowitsch sum1 -= *v1 * tmp0; 3682d876e2b0SMark Adams } 3683d876e2b0SMark Adams } 3684d876e2b0SMark Adams /* update */ 3685d876e2b0SMark Adams if (xb == b) { 3686d876e2b0SMark Adams /* whole (old way) w/ diag */ 3687d876e2b0SMark Adams switch (sizes[i]) { 3688d876e2b0SMark Adams case 5: 36895850ef23SBarry Smith x[row--] += sum5 * ibdiag[4] + sum4 * ibdiag[9] + sum3 * ibdiag[14] + sum2 * ibdiag[19] + sum1 * ibdiag[24]; 36905850ef23SBarry Smith x[row--] += sum5 * ibdiag[3] + sum4 * ibdiag[8] + sum3 * ibdiag[13] + sum2 * ibdiag[18] + sum1 * ibdiag[23]; 36915850ef23SBarry Smith x[row--] += sum5 * ibdiag[2] + sum4 * ibdiag[7] + sum3 * ibdiag[12] + sum2 * ibdiag[17] + sum1 * ibdiag[22]; 36925850ef23SBarry Smith x[row--] += sum5 * ibdiag[1] + sum4 * ibdiag[6] + sum3 * ibdiag[11] + sum2 * ibdiag[16] + sum1 * ibdiag[21]; 36935850ef23SBarry Smith x[row--] += sum5 * ibdiag[0] + sum4 * ibdiag[5] + sum3 * ibdiag[10] + sum2 * ibdiag[15] + sum1 * ibdiag[20]; 36945850ef23SBarry Smith break; 3695d876e2b0SMark Adams case 4: 3696d876e2b0SMark Adams x[row--] += sum4 * ibdiag[3] + sum3 * ibdiag[7] + sum2 * ibdiag[11] + sum1 * ibdiag[15]; 3697d876e2b0SMark Adams x[row--] += sum4 * ibdiag[2] + sum3 * ibdiag[6] + sum2 * ibdiag[10] + sum1 * ibdiag[14]; 3698d876e2b0SMark Adams x[row--] += sum4 * ibdiag[1] + sum3 * ibdiag[5] + sum2 * ibdiag[9] + sum1 * ibdiag[13]; 3699d876e2b0SMark Adams x[row--] += sum4 * ibdiag[0] + sum3 * ibdiag[4] + sum2 * ibdiag[8] + sum1 * ibdiag[12]; 3700d876e2b0SMark Adams break; 3701d876e2b0SMark Adams case 3: 3702d876e2b0SMark Adams x[row--] += sum3 * ibdiag[2] + sum2 * ibdiag[5] + sum1 * ibdiag[8]; 3703d876e2b0SMark Adams x[row--] += sum3 * ibdiag[1] + sum2 * ibdiag[4] + sum1 * ibdiag[7]; 3704d876e2b0SMark Adams x[row--] += sum3 * ibdiag[0] + sum2 * ibdiag[3] + sum1 * ibdiag[6]; 3705d876e2b0SMark Adams break; 3706d876e2b0SMark Adams case 2: 3707d876e2b0SMark Adams x[row--] += sum2 * ibdiag[1] + sum1 * ibdiag[3]; 3708d876e2b0SMark Adams x[row--] += sum2 * ibdiag[0] + sum1 * ibdiag[2]; 3709d876e2b0SMark Adams break; 3710d71ae5a4SJacob Faibussowitsch case 1: 3711d71ae5a4SJacob Faibussowitsch x[row--] += sum1 * (*ibdiag); 3712d71ae5a4SJacob Faibussowitsch break; 3713d876e2b0SMark Adams } 3714d876e2b0SMark Adams } else { 3715d876e2b0SMark Adams /* no diag so set = */ 3716d876e2b0SMark Adams switch (sizes[i]) { 3717d876e2b0SMark Adams case 5: 3718d876e2b0SMark Adams x[row--] = sum5 * ibdiag[4] + sum4 * ibdiag[9] + sum3 * ibdiag[14] + sum2 * ibdiag[19] + sum1 * ibdiag[24]; 3719d876e2b0SMark Adams x[row--] = sum5 * ibdiag[3] + sum4 * ibdiag[8] + sum3 * ibdiag[13] + sum2 * ibdiag[18] + sum1 * ibdiag[23]; 3720d876e2b0SMark Adams x[row--] = sum5 * ibdiag[2] + sum4 * ibdiag[7] + sum3 * ibdiag[12] + sum2 * ibdiag[17] + sum1 * ibdiag[22]; 3721d876e2b0SMark Adams x[row--] = sum5 * ibdiag[1] + sum4 * ibdiag[6] + sum3 * ibdiag[11] + sum2 * ibdiag[16] + sum1 * ibdiag[21]; 3722d876e2b0SMark Adams x[row--] = sum5 * ibdiag[0] + sum4 * ibdiag[5] + sum3 * ibdiag[10] + sum2 * ibdiag[15] + sum1 * ibdiag[20]; 3723d876e2b0SMark Adams break; 3724d876e2b0SMark Adams case 4: 3725d876e2b0SMark Adams x[row--] = sum4 * ibdiag[3] + sum3 * ibdiag[7] + sum2 * ibdiag[11] + sum1 * ibdiag[15]; 3726d876e2b0SMark Adams x[row--] = sum4 * ibdiag[2] + sum3 * ibdiag[6] + sum2 * ibdiag[10] + sum1 * ibdiag[14]; 3727d876e2b0SMark Adams x[row--] = sum4 * ibdiag[1] + sum3 * ibdiag[5] + sum2 * ibdiag[9] + sum1 * ibdiag[13]; 3728d876e2b0SMark Adams x[row--] = sum4 * ibdiag[0] + sum3 * ibdiag[4] + sum2 * ibdiag[8] + sum1 * ibdiag[12]; 3729d876e2b0SMark Adams break; 3730d876e2b0SMark Adams case 3: 3731d876e2b0SMark Adams x[row--] = sum3 * ibdiag[2] + sum2 * ibdiag[5] + sum1 * ibdiag[8]; 3732d876e2b0SMark Adams x[row--] = sum3 * ibdiag[1] + sum2 * ibdiag[4] + sum1 * ibdiag[7]; 3733d876e2b0SMark Adams x[row--] = sum3 * ibdiag[0] + sum2 * ibdiag[3] + sum1 * ibdiag[6]; 3734d876e2b0SMark Adams break; 3735d876e2b0SMark Adams case 2: 3736d876e2b0SMark Adams x[row--] = sum2 * ibdiag[1] + sum1 * ibdiag[3]; 3737d876e2b0SMark Adams x[row--] = sum2 * ibdiag[0] + sum1 * ibdiag[2]; 3738d876e2b0SMark Adams break; 3739d71ae5a4SJacob Faibussowitsch case 1: 3740d71ae5a4SJacob Faibussowitsch x[row--] = sum1 * (*ibdiag); 3741d71ae5a4SJacob Faibussowitsch break; 37425850ef23SBarry Smith } 37435850ef23SBarry Smith } 3744d876e2b0SMark Adams } 3745d876e2b0SMark Adams if (xb == b) { 37469566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * a->nz)); 3747d876e2b0SMark Adams } else { 37489566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(a->nz)); /* assumes 1/2 in upper, undercounts diag inverse */ 3749d876e2b0SMark Adams } 37505850ef23SBarry Smith } 37512af78befSBarry Smith } 375289c6957cSBarry Smith if (flag & SOR_EISENSTAT) { 375389c6957cSBarry Smith /* 375489c6957cSBarry Smith Apply (U + D)^-1 where D is now the block diagonal 375589c6957cSBarry Smith */ 375689c6957cSBarry Smith ibdiag = a->inode.ibdiag + a->inode.bdiagsize; 375789c6957cSBarry Smith for (i = m - 1, row = A->rmap->n - 1; i >= 0; i--) { 375889c6957cSBarry Smith ibdiag -= sizes[i] * sizes[i]; 375989c6957cSBarry Smith sz = ii[row + 1] - diag[row] - 1; 376089c6957cSBarry Smith v1 = a->a + diag[row] + 1; 376189c6957cSBarry Smith idx = a->j + diag[row] + 1; 37624108e4d5SBarry Smith /* see comments for MatMult_SeqAIJ_Inode() for how this is coded */ 376389c6957cSBarry Smith switch (sizes[i]) { 376489c6957cSBarry Smith case 1: 376589c6957cSBarry Smith 376689c6957cSBarry Smith sum1 = b[row]; 376789c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 376889c6957cSBarry Smith i1 = idx[0]; 376989c6957cSBarry Smith i2 = idx[1]; 377089c6957cSBarry Smith idx += 2; 377189c6957cSBarry Smith tmp0 = x[i1]; 377289c6957cSBarry Smith tmp1 = x[i2]; 37739371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 37749371c9d4SSatish Balay v1 += 2; 377589c6957cSBarry Smith } 377689c6957cSBarry Smith 377789c6957cSBarry Smith if (n == sz - 1) { 377889c6957cSBarry Smith tmp0 = x[*idx]; 377989c6957cSBarry Smith sum1 -= *v1 * tmp0; 378089c6957cSBarry Smith } 37819371c9d4SSatish Balay x[row] = sum1 * (*ibdiag); 37829371c9d4SSatish Balay row--; 378389c6957cSBarry Smith break; 378489c6957cSBarry Smith 378589c6957cSBarry Smith case 2: 378689c6957cSBarry Smith 378789c6957cSBarry Smith sum1 = b[row]; 378889c6957cSBarry Smith sum2 = b[row - 1]; 378989c6957cSBarry Smith /* note that sum1 is associated with the second of the two rows */ 379089c6957cSBarry Smith v2 = a->a + diag[row - 1] + 2; 379189c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 379289c6957cSBarry Smith i1 = idx[0]; 379389c6957cSBarry Smith i2 = idx[1]; 379489c6957cSBarry Smith idx += 2; 379589c6957cSBarry Smith tmp0 = x[i1]; 379689c6957cSBarry Smith tmp1 = x[i2]; 37979371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 37989371c9d4SSatish Balay v1 += 2; 37999371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 38009371c9d4SSatish Balay v2 += 2; 380189c6957cSBarry Smith } 380289c6957cSBarry Smith 380389c6957cSBarry Smith if (n == sz - 1) { 380489c6957cSBarry Smith tmp0 = x[*idx]; 380589c6957cSBarry Smith sum1 -= *v1 * tmp0; 380689c6957cSBarry Smith sum2 -= *v2 * tmp0; 380789c6957cSBarry Smith } 3808938d4eb3SBarry Smith x[row] = sum2 * ibdiag[1] + sum1 * ibdiag[3]; 3809938d4eb3SBarry Smith x[row - 1] = sum2 * ibdiag[0] + sum1 * ibdiag[2]; 3810938d4eb3SBarry Smith row -= 2; 381189c6957cSBarry Smith break; 381289c6957cSBarry Smith case 3: 381389c6957cSBarry Smith 381489c6957cSBarry Smith sum1 = b[row]; 381589c6957cSBarry Smith sum2 = b[row - 1]; 381689c6957cSBarry Smith sum3 = b[row - 2]; 381789c6957cSBarry Smith v2 = a->a + diag[row - 1] + 2; 381889c6957cSBarry Smith v3 = a->a + diag[row - 2] + 3; 381989c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 382089c6957cSBarry Smith i1 = idx[0]; 382189c6957cSBarry Smith i2 = idx[1]; 382289c6957cSBarry Smith idx += 2; 382389c6957cSBarry Smith tmp0 = x[i1]; 382489c6957cSBarry Smith tmp1 = x[i2]; 38259371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 38269371c9d4SSatish Balay v1 += 2; 38279371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 38289371c9d4SSatish Balay v2 += 2; 38299371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 38309371c9d4SSatish Balay v3 += 2; 383189c6957cSBarry Smith } 383289c6957cSBarry Smith 383389c6957cSBarry Smith if (n == sz - 1) { 383489c6957cSBarry Smith tmp0 = x[*idx]; 383589c6957cSBarry Smith sum1 -= *v1 * tmp0; 383689c6957cSBarry Smith sum2 -= *v2 * tmp0; 383789c6957cSBarry Smith sum3 -= *v3 * tmp0; 383889c6957cSBarry Smith } 3839938d4eb3SBarry Smith x[row] = sum3 * ibdiag[2] + sum2 * ibdiag[5] + sum1 * ibdiag[8]; 3840938d4eb3SBarry Smith x[row - 1] = sum3 * ibdiag[1] + sum2 * ibdiag[4] + sum1 * ibdiag[7]; 3841938d4eb3SBarry Smith x[row - 2] = sum3 * ibdiag[0] + sum2 * ibdiag[3] + sum1 * ibdiag[6]; 3842938d4eb3SBarry Smith row -= 3; 384389c6957cSBarry Smith break; 384489c6957cSBarry Smith case 4: 384589c6957cSBarry Smith 384689c6957cSBarry Smith sum1 = b[row]; 384789c6957cSBarry Smith sum2 = b[row - 1]; 384889c6957cSBarry Smith sum3 = b[row - 2]; 384989c6957cSBarry Smith sum4 = b[row - 3]; 385089c6957cSBarry Smith v2 = a->a + diag[row - 1] + 2; 385189c6957cSBarry Smith v3 = a->a + diag[row - 2] + 3; 385289c6957cSBarry Smith v4 = a->a + diag[row - 3] + 4; 385389c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 385489c6957cSBarry Smith i1 = idx[0]; 385589c6957cSBarry Smith i2 = idx[1]; 385689c6957cSBarry Smith idx += 2; 385789c6957cSBarry Smith tmp0 = x[i1]; 385889c6957cSBarry Smith tmp1 = x[i2]; 38599371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 38609371c9d4SSatish Balay v1 += 2; 38619371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 38629371c9d4SSatish Balay v2 += 2; 38639371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 38649371c9d4SSatish Balay v3 += 2; 38659371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 38669371c9d4SSatish Balay v4 += 2; 386789c6957cSBarry Smith } 386889c6957cSBarry Smith 386989c6957cSBarry Smith if (n == sz - 1) { 387089c6957cSBarry Smith tmp0 = x[*idx]; 387189c6957cSBarry Smith sum1 -= *v1 * tmp0; 387289c6957cSBarry Smith sum2 -= *v2 * tmp0; 387389c6957cSBarry Smith sum3 -= *v3 * tmp0; 387489c6957cSBarry Smith sum4 -= *v4 * tmp0; 387589c6957cSBarry Smith } 3876938d4eb3SBarry Smith x[row] = sum4 * ibdiag[3] + sum3 * ibdiag[7] + sum2 * ibdiag[11] + sum1 * ibdiag[15]; 3877938d4eb3SBarry Smith x[row - 1] = sum4 * ibdiag[2] + sum3 * ibdiag[6] + sum2 * ibdiag[10] + sum1 * ibdiag[14]; 3878938d4eb3SBarry Smith x[row - 2] = sum4 * ibdiag[1] + sum3 * ibdiag[5] + sum2 * ibdiag[9] + sum1 * ibdiag[13]; 3879938d4eb3SBarry Smith x[row - 3] = sum4 * ibdiag[0] + sum3 * ibdiag[4] + sum2 * ibdiag[8] + sum1 * ibdiag[12]; 3880938d4eb3SBarry Smith row -= 4; 388189c6957cSBarry Smith break; 388289c6957cSBarry Smith case 5: 388389c6957cSBarry Smith 388489c6957cSBarry Smith sum1 = b[row]; 388589c6957cSBarry Smith sum2 = b[row - 1]; 388689c6957cSBarry Smith sum3 = b[row - 2]; 388789c6957cSBarry Smith sum4 = b[row - 3]; 388889c6957cSBarry Smith sum5 = b[row - 4]; 388989c6957cSBarry Smith v2 = a->a + diag[row - 1] + 2; 389089c6957cSBarry Smith v3 = a->a + diag[row - 2] + 3; 389189c6957cSBarry Smith v4 = a->a + diag[row - 3] + 4; 389289c6957cSBarry Smith v5 = a->a + diag[row - 4] + 5; 389389c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 389489c6957cSBarry Smith i1 = idx[0]; 389589c6957cSBarry Smith i2 = idx[1]; 389689c6957cSBarry Smith idx += 2; 389789c6957cSBarry Smith tmp0 = x[i1]; 389889c6957cSBarry Smith tmp1 = x[i2]; 38999371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 39009371c9d4SSatish Balay v1 += 2; 39019371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 39029371c9d4SSatish Balay v2 += 2; 39039371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 39049371c9d4SSatish Balay v3 += 2; 39059371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 39069371c9d4SSatish Balay v4 += 2; 39079371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 39089371c9d4SSatish Balay v5 += 2; 390989c6957cSBarry Smith } 391089c6957cSBarry Smith 391189c6957cSBarry Smith if (n == sz - 1) { 391289c6957cSBarry Smith tmp0 = x[*idx]; 391389c6957cSBarry Smith sum1 -= *v1 * tmp0; 391489c6957cSBarry Smith sum2 -= *v2 * tmp0; 391589c6957cSBarry Smith sum3 -= *v3 * tmp0; 391689c6957cSBarry Smith sum4 -= *v4 * tmp0; 391789c6957cSBarry Smith sum5 -= *v5 * tmp0; 391889c6957cSBarry Smith } 3919938d4eb3SBarry Smith x[row] = sum5 * ibdiag[4] + sum4 * ibdiag[9] + sum3 * ibdiag[14] + sum2 * ibdiag[19] + sum1 * ibdiag[24]; 3920938d4eb3SBarry Smith x[row - 1] = sum5 * ibdiag[3] + sum4 * ibdiag[8] + sum3 * ibdiag[13] + sum2 * ibdiag[18] + sum1 * ibdiag[23]; 3921938d4eb3SBarry Smith x[row - 2] = sum5 * ibdiag[2] + sum4 * ibdiag[7] + sum3 * ibdiag[12] + sum2 * ibdiag[17] + sum1 * ibdiag[22]; 3922938d4eb3SBarry Smith x[row - 3] = sum5 * ibdiag[1] + sum4 * ibdiag[6] + sum3 * ibdiag[11] + sum2 * ibdiag[16] + sum1 * ibdiag[21]; 3923938d4eb3SBarry Smith x[row - 4] = sum5 * ibdiag[0] + sum4 * ibdiag[5] + sum3 * ibdiag[10] + sum2 * ibdiag[15] + sum1 * ibdiag[20]; 3924938d4eb3SBarry Smith row -= 5; 392589c6957cSBarry Smith break; 3926d71ae5a4SJacob Faibussowitsch default: 3927d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Inode size %" PetscInt_FMT " not supported", sizes[i]); 392889c6957cSBarry Smith } 392989c6957cSBarry Smith } 39309566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(a->nz)); 393189c6957cSBarry Smith 393289c6957cSBarry Smith /* 393389c6957cSBarry Smith t = b - D x where D is the block diagonal 393489c6957cSBarry Smith */ 393589c6957cSBarry Smith cnt = 0; 393689c6957cSBarry Smith for (i = 0, row = 0; i < m; i++) { 393789c6957cSBarry Smith switch (sizes[i]) { 393889c6957cSBarry Smith case 1: 39399371c9d4SSatish Balay t[row] = b[row] - bdiag[cnt++] * x[row]; 39409371c9d4SSatish Balay row++; 394189c6957cSBarry Smith break; 394289c6957cSBarry Smith case 2: 39439371c9d4SSatish Balay x1 = x[row]; 39449371c9d4SSatish Balay x2 = x[row + 1]; 394589c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 2]; 394689c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 3]; 394789c6957cSBarry Smith t[row] = b[row] - tmp1; 39489371c9d4SSatish Balay t[row + 1] = b[row + 1] - tmp2; 39499371c9d4SSatish Balay row += 2; 395089c6957cSBarry Smith cnt += 4; 395189c6957cSBarry Smith break; 395289c6957cSBarry Smith case 3: 39539371c9d4SSatish Balay x1 = x[row]; 39549371c9d4SSatish Balay x2 = x[row + 1]; 39559371c9d4SSatish Balay x3 = x[row + 2]; 395689c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 3] + x3 * bdiag[cnt + 6]; 395789c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 4] + x3 * bdiag[cnt + 7]; 395889c6957cSBarry Smith tmp3 = x1 * bdiag[cnt + 2] + x2 * bdiag[cnt + 5] + x3 * bdiag[cnt + 8]; 395989c6957cSBarry Smith t[row] = b[row] - tmp1; 396089c6957cSBarry Smith t[row + 1] = b[row + 1] - tmp2; 39619371c9d4SSatish Balay t[row + 2] = b[row + 2] - tmp3; 39629371c9d4SSatish Balay row += 3; 396389c6957cSBarry Smith cnt += 9; 396489c6957cSBarry Smith break; 396589c6957cSBarry Smith case 4: 39669371c9d4SSatish Balay x1 = x[row]; 39679371c9d4SSatish Balay x2 = x[row + 1]; 39689371c9d4SSatish Balay x3 = x[row + 2]; 39699371c9d4SSatish Balay x4 = x[row + 3]; 397089c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 4] + x3 * bdiag[cnt + 8] + x4 * bdiag[cnt + 12]; 397189c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 5] + x3 * bdiag[cnt + 9] + x4 * bdiag[cnt + 13]; 397289c6957cSBarry Smith tmp3 = x1 * bdiag[cnt + 2] + x2 * bdiag[cnt + 6] + x3 * bdiag[cnt + 10] + x4 * bdiag[cnt + 14]; 397389c6957cSBarry Smith tmp4 = x1 * bdiag[cnt + 3] + x2 * bdiag[cnt + 7] + x3 * bdiag[cnt + 11] + x4 * bdiag[cnt + 15]; 397489c6957cSBarry Smith t[row] = b[row] - tmp1; 397589c6957cSBarry Smith t[row + 1] = b[row + 1] - tmp2; 397689c6957cSBarry Smith t[row + 2] = b[row + 2] - tmp3; 39779371c9d4SSatish Balay t[row + 3] = b[row + 3] - tmp4; 39789371c9d4SSatish Balay row += 4; 397989c6957cSBarry Smith cnt += 16; 398089c6957cSBarry Smith break; 398189c6957cSBarry Smith case 5: 39829371c9d4SSatish Balay x1 = x[row]; 39839371c9d4SSatish Balay x2 = x[row + 1]; 39849371c9d4SSatish Balay x3 = x[row + 2]; 39859371c9d4SSatish Balay x4 = x[row + 3]; 39869371c9d4SSatish Balay x5 = x[row + 4]; 398789c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 5] + x3 * bdiag[cnt + 10] + x4 * bdiag[cnt + 15] + x5 * bdiag[cnt + 20]; 398889c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 6] + x3 * bdiag[cnt + 11] + x4 * bdiag[cnt + 16] + x5 * bdiag[cnt + 21]; 398989c6957cSBarry Smith tmp3 = x1 * bdiag[cnt + 2] + x2 * bdiag[cnt + 7] + x3 * bdiag[cnt + 12] + x4 * bdiag[cnt + 17] + x5 * bdiag[cnt + 22]; 399089c6957cSBarry Smith tmp4 = x1 * bdiag[cnt + 3] + x2 * bdiag[cnt + 8] + x3 * bdiag[cnt + 13] + x4 * bdiag[cnt + 18] + x5 * bdiag[cnt + 23]; 399189c6957cSBarry Smith tmp5 = x1 * bdiag[cnt + 4] + x2 * bdiag[cnt + 9] + x3 * bdiag[cnt + 14] + x4 * bdiag[cnt + 19] + x5 * bdiag[cnt + 24]; 399289c6957cSBarry Smith t[row] = b[row] - tmp1; 399389c6957cSBarry Smith t[row + 1] = b[row + 1] - tmp2; 399489c6957cSBarry Smith t[row + 2] = b[row + 2] - tmp3; 399589c6957cSBarry Smith t[row + 3] = b[row + 3] - tmp4; 39969371c9d4SSatish Balay t[row + 4] = b[row + 4] - tmp5; 39979371c9d4SSatish Balay row += 5; 399889c6957cSBarry Smith cnt += 25; 399989c6957cSBarry Smith break; 4000d71ae5a4SJacob Faibussowitsch default: 4001d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Inode size %" PetscInt_FMT " not supported", sizes[i]); 400289c6957cSBarry Smith } 400389c6957cSBarry Smith } 40049566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(m)); 400589c6957cSBarry Smith 400689c6957cSBarry Smith /* 400789c6957cSBarry Smith Apply (L + D)^-1 where D is the block diagonal 400889c6957cSBarry Smith */ 400989c6957cSBarry Smith for (i = 0, row = 0; i < m; i++) { 401089c6957cSBarry Smith sz = diag[row] - ii[row]; 401189c6957cSBarry Smith v1 = a->a + ii[row]; 401289c6957cSBarry Smith idx = a->j + ii[row]; 40134108e4d5SBarry Smith /* see comments for MatMult_SeqAIJ_Inode() for how this is coded */ 401489c6957cSBarry Smith switch (sizes[i]) { 401589c6957cSBarry Smith case 1: 401689c6957cSBarry Smith 401789c6957cSBarry Smith sum1 = t[row]; 401889c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 401989c6957cSBarry Smith i1 = idx[0]; 402089c6957cSBarry Smith i2 = idx[1]; 402189c6957cSBarry Smith idx += 2; 402289c6957cSBarry Smith tmp0 = t[i1]; 402389c6957cSBarry Smith tmp1 = t[i2]; 40249371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 40259371c9d4SSatish Balay v1 += 2; 402689c6957cSBarry Smith } 402789c6957cSBarry Smith 402889c6957cSBarry Smith if (n == sz - 1) { 402989c6957cSBarry Smith tmp0 = t[*idx]; 403089c6957cSBarry Smith sum1 -= *v1 * tmp0; 403189c6957cSBarry Smith } 40329371c9d4SSatish Balay x[row] += t[row] = sum1 * (*ibdiag++); 40339371c9d4SSatish Balay row++; 403489c6957cSBarry Smith break; 403589c6957cSBarry Smith case 2: 403689c6957cSBarry Smith v2 = a->a + ii[row + 1]; 403789c6957cSBarry Smith sum1 = t[row]; 403889c6957cSBarry Smith sum2 = t[row + 1]; 403989c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 404089c6957cSBarry Smith i1 = idx[0]; 404189c6957cSBarry Smith i2 = idx[1]; 404289c6957cSBarry Smith idx += 2; 404389c6957cSBarry Smith tmp0 = t[i1]; 404489c6957cSBarry Smith tmp1 = t[i2]; 40459371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 40469371c9d4SSatish Balay v1 += 2; 40479371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 40489371c9d4SSatish Balay v2 += 2; 404989c6957cSBarry Smith } 405089c6957cSBarry Smith 405189c6957cSBarry Smith if (n == sz - 1) { 405289c6957cSBarry Smith tmp0 = t[*idx]; 405389c6957cSBarry Smith sum1 -= v1[0] * tmp0; 405489c6957cSBarry Smith sum2 -= v2[0] * tmp0; 405589c6957cSBarry Smith } 405689c6957cSBarry Smith x[row] += t[row] = sum1 * ibdiag[0] + sum2 * ibdiag[2]; 405789c6957cSBarry Smith x[row + 1] += t[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[3]; 40589371c9d4SSatish Balay ibdiag += 4; 40599371c9d4SSatish Balay row += 2; 406089c6957cSBarry Smith break; 406189c6957cSBarry Smith case 3: 406289c6957cSBarry Smith v2 = a->a + ii[row + 1]; 406389c6957cSBarry Smith v3 = a->a + ii[row + 2]; 406489c6957cSBarry Smith sum1 = t[row]; 406589c6957cSBarry Smith sum2 = t[row + 1]; 406689c6957cSBarry Smith sum3 = t[row + 2]; 406789c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 406889c6957cSBarry Smith i1 = idx[0]; 406989c6957cSBarry Smith i2 = idx[1]; 407089c6957cSBarry Smith idx += 2; 407189c6957cSBarry Smith tmp0 = t[i1]; 407289c6957cSBarry Smith tmp1 = t[i2]; 40739371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 40749371c9d4SSatish Balay v1 += 2; 40759371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 40769371c9d4SSatish Balay v2 += 2; 40779371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 40789371c9d4SSatish Balay v3 += 2; 407989c6957cSBarry Smith } 408089c6957cSBarry Smith 408189c6957cSBarry Smith if (n == sz - 1) { 408289c6957cSBarry Smith tmp0 = t[*idx]; 408389c6957cSBarry Smith sum1 -= v1[0] * tmp0; 408489c6957cSBarry Smith sum2 -= v2[0] * tmp0; 408589c6957cSBarry Smith sum3 -= v3[0] * tmp0; 408689c6957cSBarry Smith } 408789c6957cSBarry Smith x[row] += t[row] = sum1 * ibdiag[0] + sum2 * ibdiag[3] + sum3 * ibdiag[6]; 408889c6957cSBarry Smith x[row + 1] += t[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[4] + sum3 * ibdiag[7]; 408989c6957cSBarry Smith x[row + 2] += t[row + 2] = sum1 * ibdiag[2] + sum2 * ibdiag[5] + sum3 * ibdiag[8]; 40909371c9d4SSatish Balay ibdiag += 9; 40919371c9d4SSatish Balay row += 3; 409289c6957cSBarry Smith break; 409389c6957cSBarry Smith case 4: 409489c6957cSBarry Smith v2 = a->a + ii[row + 1]; 409589c6957cSBarry Smith v3 = a->a + ii[row + 2]; 409689c6957cSBarry Smith v4 = a->a + ii[row + 3]; 409789c6957cSBarry Smith sum1 = t[row]; 409889c6957cSBarry Smith sum2 = t[row + 1]; 409989c6957cSBarry Smith sum3 = t[row + 2]; 410089c6957cSBarry Smith sum4 = t[row + 3]; 410189c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 410289c6957cSBarry Smith i1 = idx[0]; 410389c6957cSBarry Smith i2 = idx[1]; 410489c6957cSBarry Smith idx += 2; 410589c6957cSBarry Smith tmp0 = t[i1]; 410689c6957cSBarry Smith tmp1 = t[i2]; 41079371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 41089371c9d4SSatish Balay v1 += 2; 41099371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 41109371c9d4SSatish Balay v2 += 2; 41119371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 41129371c9d4SSatish Balay v3 += 2; 41139371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 41149371c9d4SSatish Balay v4 += 2; 411589c6957cSBarry Smith } 411689c6957cSBarry Smith 411789c6957cSBarry Smith if (n == sz - 1) { 411889c6957cSBarry Smith tmp0 = t[*idx]; 411989c6957cSBarry Smith sum1 -= v1[0] * tmp0; 412089c6957cSBarry Smith sum2 -= v2[0] * tmp0; 412189c6957cSBarry Smith sum3 -= v3[0] * tmp0; 412289c6957cSBarry Smith sum4 -= v4[0] * tmp0; 412389c6957cSBarry Smith } 412489c6957cSBarry Smith x[row] += t[row] = sum1 * ibdiag[0] + sum2 * ibdiag[4] + sum3 * ibdiag[8] + sum4 * ibdiag[12]; 412589c6957cSBarry Smith x[row + 1] += t[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[5] + sum3 * ibdiag[9] + sum4 * ibdiag[13]; 412689c6957cSBarry Smith x[row + 2] += t[row + 2] = sum1 * ibdiag[2] + sum2 * ibdiag[6] + sum3 * ibdiag[10] + sum4 * ibdiag[14]; 412789c6957cSBarry Smith x[row + 3] += t[row + 3] = sum1 * ibdiag[3] + sum2 * ibdiag[7] + sum3 * ibdiag[11] + sum4 * ibdiag[15]; 41289371c9d4SSatish Balay ibdiag += 16; 41299371c9d4SSatish Balay row += 4; 413089c6957cSBarry Smith break; 413189c6957cSBarry Smith case 5: 413289c6957cSBarry Smith v2 = a->a + ii[row + 1]; 413389c6957cSBarry Smith v3 = a->a + ii[row + 2]; 413489c6957cSBarry Smith v4 = a->a + ii[row + 3]; 413589c6957cSBarry Smith v5 = a->a + ii[row + 4]; 413689c6957cSBarry Smith sum1 = t[row]; 413789c6957cSBarry Smith sum2 = t[row + 1]; 413889c6957cSBarry Smith sum3 = t[row + 2]; 413989c6957cSBarry Smith sum4 = t[row + 3]; 414089c6957cSBarry Smith sum5 = t[row + 4]; 414189c6957cSBarry Smith for (n = 0; n < sz - 1; n += 2) { 414289c6957cSBarry Smith i1 = idx[0]; 414389c6957cSBarry Smith i2 = idx[1]; 414489c6957cSBarry Smith idx += 2; 414589c6957cSBarry Smith tmp0 = t[i1]; 414689c6957cSBarry Smith tmp1 = t[i2]; 41479371c9d4SSatish Balay sum1 -= v1[0] * tmp0 + v1[1] * tmp1; 41489371c9d4SSatish Balay v1 += 2; 41499371c9d4SSatish Balay sum2 -= v2[0] * tmp0 + v2[1] * tmp1; 41509371c9d4SSatish Balay v2 += 2; 41519371c9d4SSatish Balay sum3 -= v3[0] * tmp0 + v3[1] * tmp1; 41529371c9d4SSatish Balay v3 += 2; 41539371c9d4SSatish Balay sum4 -= v4[0] * tmp0 + v4[1] * tmp1; 41549371c9d4SSatish Balay v4 += 2; 41559371c9d4SSatish Balay sum5 -= v5[0] * tmp0 + v5[1] * tmp1; 41569371c9d4SSatish Balay v5 += 2; 415789c6957cSBarry Smith } 415889c6957cSBarry Smith 415989c6957cSBarry Smith if (n == sz - 1) { 416089c6957cSBarry Smith tmp0 = t[*idx]; 416189c6957cSBarry Smith sum1 -= v1[0] * tmp0; 416289c6957cSBarry Smith sum2 -= v2[0] * tmp0; 416389c6957cSBarry Smith sum3 -= v3[0] * tmp0; 416489c6957cSBarry Smith sum4 -= v4[0] * tmp0; 416589c6957cSBarry Smith sum5 -= v5[0] * tmp0; 416689c6957cSBarry Smith } 416789c6957cSBarry Smith x[row] += t[row] = sum1 * ibdiag[0] + sum2 * ibdiag[5] + sum3 * ibdiag[10] + sum4 * ibdiag[15] + sum5 * ibdiag[20]; 416889c6957cSBarry Smith x[row + 1] += t[row + 1] = sum1 * ibdiag[1] + sum2 * ibdiag[6] + sum3 * ibdiag[11] + sum4 * ibdiag[16] + sum5 * ibdiag[21]; 416989c6957cSBarry Smith x[row + 2] += t[row + 2] = sum1 * ibdiag[2] + sum2 * ibdiag[7] + sum3 * ibdiag[12] + sum4 * ibdiag[17] + sum5 * ibdiag[22]; 417089c6957cSBarry Smith x[row + 3] += t[row + 3] = sum1 * ibdiag[3] + sum2 * ibdiag[8] + sum3 * ibdiag[13] + sum4 * ibdiag[18] + sum5 * ibdiag[23]; 417189c6957cSBarry Smith x[row + 4] += t[row + 4] = sum1 * ibdiag[4] + sum2 * ibdiag[9] + sum3 * ibdiag[14] + sum4 * ibdiag[19] + sum5 * ibdiag[24]; 41729371c9d4SSatish Balay ibdiag += 25; 41739371c9d4SSatish Balay row += 5; 417489c6957cSBarry Smith break; 4175d71ae5a4SJacob Faibussowitsch default: 4176d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Inode size %" PetscInt_FMT " not supported", sizes[i]); 417789c6957cSBarry Smith } 417889c6957cSBarry Smith } 41799566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(a->nz)); 41805850ef23SBarry Smith } 41819566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(xx, &x)); 41829566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(bb, &b)); 41833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 41842af78befSBarry Smith } 41852af78befSBarry Smith 4186ff6a9541SJacob Faibussowitsch static PetscErrorCode MatMultDiagonalBlock_SeqAIJ_Inode(Mat A, Vec bb, Vec xx) 4187d71ae5a4SJacob Faibussowitsch { 418889c6957cSBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 418989c6957cSBarry Smith PetscScalar *x, tmp1, tmp2, tmp3, tmp4, tmp5, x1, x2, x3, x4, x5; 419089c6957cSBarry Smith const MatScalar *bdiag = a->inode.bdiag; 419189c6957cSBarry Smith const PetscScalar *b; 419289c6957cSBarry Smith PetscInt m = a->inode.node_count, cnt = 0, i, row; 419389c6957cSBarry Smith const PetscInt *sizes = a->inode.size; 41942af78befSBarry Smith 419589c6957cSBarry Smith PetscFunctionBegin; 419608401ef6SPierre Jolivet PetscCheck(a->inode.size, PETSC_COMM_SELF, PETSC_ERR_COR, "Missing Inode Structure"); 41979566063dSJacob Faibussowitsch PetscCall(VecGetArray(xx, &x)); 41989566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(bb, &b)); 419989c6957cSBarry Smith cnt = 0; 420089c6957cSBarry Smith for (i = 0, row = 0; i < m; i++) { 420189c6957cSBarry Smith switch (sizes[i]) { 420289c6957cSBarry Smith case 1: 42039371c9d4SSatish Balay x[row] = b[row] * bdiag[cnt++]; 42049371c9d4SSatish Balay row++; 420589c6957cSBarry Smith break; 420689c6957cSBarry Smith case 2: 42079371c9d4SSatish Balay x1 = b[row]; 42089371c9d4SSatish Balay x2 = b[row + 1]; 420989c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 2]; 421089c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 3]; 421189c6957cSBarry Smith x[row++] = tmp1; 421289c6957cSBarry Smith x[row++] = tmp2; 421389c6957cSBarry Smith cnt += 4; 421489c6957cSBarry Smith break; 421589c6957cSBarry Smith case 3: 42169371c9d4SSatish Balay x1 = b[row]; 42179371c9d4SSatish Balay x2 = b[row + 1]; 42189371c9d4SSatish Balay x3 = b[row + 2]; 421989c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 3] + x3 * bdiag[cnt + 6]; 422089c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 4] + x3 * bdiag[cnt + 7]; 422189c6957cSBarry Smith tmp3 = x1 * bdiag[cnt + 2] + x2 * bdiag[cnt + 5] + x3 * bdiag[cnt + 8]; 422289c6957cSBarry Smith x[row++] = tmp1; 422389c6957cSBarry Smith x[row++] = tmp2; 422489c6957cSBarry Smith x[row++] = tmp3; 422589c6957cSBarry Smith cnt += 9; 422689c6957cSBarry Smith break; 422789c6957cSBarry Smith case 4: 42289371c9d4SSatish Balay x1 = b[row]; 42299371c9d4SSatish Balay x2 = b[row + 1]; 42309371c9d4SSatish Balay x3 = b[row + 2]; 42319371c9d4SSatish Balay x4 = b[row + 3]; 423289c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 4] + x3 * bdiag[cnt + 8] + x4 * bdiag[cnt + 12]; 423389c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 5] + x3 * bdiag[cnt + 9] + x4 * bdiag[cnt + 13]; 423489c6957cSBarry Smith tmp3 = x1 * bdiag[cnt + 2] + x2 * bdiag[cnt + 6] + x3 * bdiag[cnt + 10] + x4 * bdiag[cnt + 14]; 423589c6957cSBarry Smith tmp4 = x1 * bdiag[cnt + 3] + x2 * bdiag[cnt + 7] + x3 * bdiag[cnt + 11] + x4 * bdiag[cnt + 15]; 423689c6957cSBarry Smith x[row++] = tmp1; 423789c6957cSBarry Smith x[row++] = tmp2; 423889c6957cSBarry Smith x[row++] = tmp3; 423989c6957cSBarry Smith x[row++] = tmp4; 424089c6957cSBarry Smith cnt += 16; 424189c6957cSBarry Smith break; 424289c6957cSBarry Smith case 5: 42439371c9d4SSatish Balay x1 = b[row]; 42449371c9d4SSatish Balay x2 = b[row + 1]; 42459371c9d4SSatish Balay x3 = b[row + 2]; 42469371c9d4SSatish Balay x4 = b[row + 3]; 42479371c9d4SSatish Balay x5 = b[row + 4]; 424889c6957cSBarry Smith tmp1 = x1 * bdiag[cnt] + x2 * bdiag[cnt + 5] + x3 * bdiag[cnt + 10] + x4 * bdiag[cnt + 15] + x5 * bdiag[cnt + 20]; 424989c6957cSBarry Smith tmp2 = x1 * bdiag[cnt + 1] + x2 * bdiag[cnt + 6] + x3 * bdiag[cnt + 11] + x4 * bdiag[cnt + 16] + x5 * bdiag[cnt + 21]; 425089c6957cSBarry Smith tmp3 = x1 * bdiag[cnt + 2] + x2 * bdiag[cnt + 7] + x3 * bdiag[cnt + 12] + x4 * bdiag[cnt + 17] + x5 * bdiag[cnt + 22]; 425189c6957cSBarry Smith tmp4 = x1 * bdiag[cnt + 3] + x2 * bdiag[cnt + 8] + x3 * bdiag[cnt + 13] + x4 * bdiag[cnt + 18] + x5 * bdiag[cnt + 23]; 425289c6957cSBarry Smith tmp5 = x1 * bdiag[cnt + 4] + x2 * bdiag[cnt + 9] + x3 * bdiag[cnt + 14] + x4 * bdiag[cnt + 19] + x5 * bdiag[cnt + 24]; 425389c6957cSBarry Smith x[row++] = tmp1; 425489c6957cSBarry Smith x[row++] = tmp2; 425589c6957cSBarry Smith x[row++] = tmp3; 425689c6957cSBarry Smith x[row++] = tmp4; 425789c6957cSBarry Smith x[row++] = tmp5; 425889c6957cSBarry Smith cnt += 25; 425989c6957cSBarry Smith break; 4260d71ae5a4SJacob Faibussowitsch default: 4261d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Inode size %" PetscInt_FMT " not supported", sizes[i]); 426289c6957cSBarry Smith } 426389c6957cSBarry Smith } 42649566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * cnt)); 42659566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(xx, &x)); 42669566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(bb, &b)); 42673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 426889c6957cSBarry Smith } 426989c6957cSBarry Smith 4270d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJ_Inode_ResetOps(Mat A) 4271d71ae5a4SJacob Faibussowitsch { 4272b215bc84SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 4273b215bc84SStefano Zampini 4274b215bc84SStefano Zampini PetscFunctionBegin; 4275b215bc84SStefano Zampini a->inode.node_count = 0; 4276b215bc84SStefano Zampini a->inode.use = PETSC_FALSE; 4277b215bc84SStefano Zampini a->inode.checked = PETSC_FALSE; 4278b215bc84SStefano Zampini a->inode.mat_nonzerostate = -1; 4279b215bc84SStefano Zampini A->ops->getrowij = MatGetRowIJ_SeqAIJ; 4280b215bc84SStefano Zampini A->ops->restorerowij = MatRestoreRowIJ_SeqAIJ; 4281b215bc84SStefano Zampini A->ops->getcolumnij = MatGetColumnIJ_SeqAIJ; 4282b215bc84SStefano Zampini A->ops->restorecolumnij = MatRestoreColumnIJ_SeqAIJ; 4283b215bc84SStefano Zampini A->ops->coloringpatch = NULL; 4284b215bc84SStefano Zampini A->ops->multdiagonalblock = NULL; 4285ad540459SPierre Jolivet if (A->factortype) A->ops->solve = MatSolve_SeqAIJ_inplace; 42863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4287b215bc84SStefano Zampini } 4288b215bc84SStefano Zampini 42894c1414c8SBarry Smith /* 42904c1414c8SBarry Smith samestructure indicates that the matrix has not changed its nonzero structure so we 42914c1414c8SBarry Smith do not need to recompute the inodes 42924c1414c8SBarry Smith */ 4293d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCheckInode(Mat A) 4294d71ae5a4SJacob Faibussowitsch { 42954c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 42968758e1faSBarry Smith PetscInt i, j, m, nzx, nzy, *ns, node_count, blk_size; 4297ace3abfcSBarry Smith PetscBool flag; 42988758e1faSBarry Smith const PetscInt *idx, *idy, *ii; 42994c1414c8SBarry Smith 43004c1414c8SBarry Smith PetscFunctionBegin; 4301b215bc84SStefano Zampini if (!a->inode.use) { 43029566063dSJacob Faibussowitsch PetscCall(MatSeqAIJ_Inode_ResetOps(A)); 43039566063dSJacob Faibussowitsch PetscCall(PetscFree(a->inode.size)); 43043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4305b215bc84SStefano Zampini } 43063ba16761SJacob Faibussowitsch if (a->inode.checked && A->nonzerostate == a->inode.mat_nonzerostate) PetscFunctionReturn(PETSC_SUCCESS); 43074c1414c8SBarry Smith 4308d0f46423SBarry Smith m = A->rmap->n; 43099566063dSJacob Faibussowitsch if (!a->inode.size) PetscCall(PetscMalloc1(m + 1, &a->inode.size)); 4310b215bc84SStefano Zampini ns = a->inode.size; 43114c1414c8SBarry Smith 43124c1414c8SBarry Smith i = 0; 43134c1414c8SBarry Smith node_count = 0; 43144c1414c8SBarry Smith idx = a->j; 43154c1414c8SBarry Smith ii = a->i; 43166f2c871aSStefano Zampini if (idx) { 43174c1414c8SBarry Smith while (i < m) { /* For each row */ 43184c1414c8SBarry Smith nzx = ii[i + 1] - ii[i]; /* Number of nonzeros */ 43194c1414c8SBarry Smith /* Limits the number of elements in a node to 'a->inode.limit' */ 43204c1414c8SBarry Smith for (j = i + 1, idy = idx, blk_size = 1; j < m && blk_size < a->inode.limit; ++j, ++blk_size) { 43214c1414c8SBarry Smith nzy = ii[j + 1] - ii[j]; /* Same number of nonzeros */ 43224c1414c8SBarry Smith if (nzy != nzx) break; 43234c1414c8SBarry Smith idy += nzx; /* Same nonzero pattern */ 43249566063dSJacob Faibussowitsch PetscCall(PetscArraycmp(idx, idy, nzx, &flag)); 43254c1414c8SBarry Smith if (!flag) break; 43264c1414c8SBarry Smith } 43274c1414c8SBarry Smith ns[node_count++] = blk_size; 43284c1414c8SBarry Smith idx += blk_size * nzx; 43294c1414c8SBarry Smith i = j; 43304c1414c8SBarry Smith } 43316f2c871aSStefano Zampini } 43324c1414c8SBarry Smith /* If not enough inodes found,, do not use inode version of the routines */ 43336f2c871aSStefano Zampini if (!m || !idx || node_count > .8 * m) { 43349566063dSJacob Faibussowitsch PetscCall(MatSeqAIJ_Inode_ResetOps(A)); 43359566063dSJacob Faibussowitsch PetscCall(PetscFree(a->inode.size)); 43369566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Found %" PetscInt_FMT " nodes out of %" PetscInt_FMT " rows. Not using Inode routines\n", node_count, m)); 43374c1414c8SBarry Smith } else { 4338d5f3da31SBarry Smith if (!A->factortype) { 4339375a6242SBarry Smith A->ops->multdiagonalblock = MatMultDiagonalBlock_SeqAIJ_Inode; 4340375a6242SBarry Smith if (A->rmap->n == A->cmap->n) { 43414108e4d5SBarry Smith A->ops->getrowij = MatGetRowIJ_SeqAIJ_Inode; 43424108e4d5SBarry Smith A->ops->restorerowij = MatRestoreRowIJ_SeqAIJ_Inode; 43434108e4d5SBarry Smith A->ops->getcolumnij = MatGetColumnIJ_SeqAIJ_Inode; 43444108e4d5SBarry Smith A->ops->restorecolumnij = MatRestoreColumnIJ_SeqAIJ_Inode; 43454108e4d5SBarry Smith A->ops->coloringpatch = MatColoringPatch_SeqAIJ_Inode; 4346375a6242SBarry Smith } 4347d3ac4fa3SBarry Smith } else { 4348d3ac4fa3SBarry Smith A->ops->solve = MatSolve_SeqAIJ_Inode_inplace; 4349d3ac4fa3SBarry Smith } 43504c1414c8SBarry Smith a->inode.node_count = node_count; 43519566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Found %" PetscInt_FMT " nodes of %" PetscInt_FMT ". Limit used: %" PetscInt_FMT ". Using Inode routines\n", node_count, m, a->inode.limit)); 43524c1414c8SBarry Smith } 4353be6adb11SBarry Smith a->inode.checked = PETSC_TRUE; 4354a02bda8eSBarry Smith a->inode.mat_nonzerostate = A->nonzerostate; 43553ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 43564c1414c8SBarry Smith } 43574c1414c8SBarry Smith 4358d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDuplicate_SeqAIJ_Inode(Mat A, MatDuplicateOption cpvalues, Mat *C) 4359d71ae5a4SJacob Faibussowitsch { 4360150f0143SBarry Smith Mat B = *C; 4361150f0143SBarry Smith Mat_SeqAIJ *c = (Mat_SeqAIJ *)B->data, *a = (Mat_SeqAIJ *)A->data; 4362150f0143SBarry Smith PetscInt m = A->rmap->n; 4363150f0143SBarry Smith 4364150f0143SBarry Smith PetscFunctionBegin; 4365150f0143SBarry Smith c->inode.use = a->inode.use; 4366150f0143SBarry Smith c->inode.limit = a->inode.limit; 4367150f0143SBarry Smith c->inode.max_limit = a->inode.max_limit; 4368ec710b6aSStefano Zampini c->inode.checked = PETSC_FALSE; 4369ec710b6aSStefano Zampini c->inode.size = NULL; 4370ec710b6aSStefano Zampini c->inode.node_count = 0; 4371ec710b6aSStefano Zampini c->inode.ibdiagvalid = PETSC_FALSE; 4372ec710b6aSStefano Zampini c->inode.ibdiag = NULL; 4373ec710b6aSStefano Zampini c->inode.bdiag = NULL; 4374ec710b6aSStefano Zampini c->inode.mat_nonzerostate = -1; 4375b215bc84SStefano Zampini if (a->inode.use) { 4376ec710b6aSStefano Zampini if (a->inode.checked && a->inode.size) { 43779566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m + 1, &c->inode.size)); 43789566063dSJacob Faibussowitsch PetscCall(PetscArraycpy(c->inode.size, a->inode.size, m + 1)); 4379ec710b6aSStefano Zampini 4380ec710b6aSStefano Zampini c->inode.checked = PETSC_TRUE; 4381ec710b6aSStefano Zampini c->inode.node_count = a->inode.node_count; 4382ec710b6aSStefano Zampini c->inode.mat_nonzerostate = (*C)->nonzerostate; 4383ec710b6aSStefano Zampini } 4384a02bda8eSBarry Smith /* note the table of functions below should match that in MatSeqAIJCheckInode() */ 43852c451681SBarry Smith if (!B->factortype) { 43862c451681SBarry Smith B->ops->getrowij = MatGetRowIJ_SeqAIJ_Inode; 43872c451681SBarry Smith B->ops->restorerowij = MatRestoreRowIJ_SeqAIJ_Inode; 43882c451681SBarry Smith B->ops->getcolumnij = MatGetColumnIJ_SeqAIJ_Inode; 43892c451681SBarry Smith B->ops->restorecolumnij = MatRestoreColumnIJ_SeqAIJ_Inode; 43902c451681SBarry Smith B->ops->coloringpatch = MatColoringPatch_SeqAIJ_Inode; 43912c451681SBarry Smith B->ops->multdiagonalblock = MatMultDiagonalBlock_SeqAIJ_Inode; 4392150f0143SBarry Smith } else { 43932c451681SBarry Smith B->ops->solve = MatSolve_SeqAIJ_Inode_inplace; 4394150f0143SBarry Smith } 4395150f0143SBarry Smith } 43963ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4397150f0143SBarry Smith } 4398150f0143SBarry Smith 4399d71ae5a4SJacob Faibussowitsch static inline PetscErrorCode MatGetRow_FactoredLU(PetscInt *cols, PetscInt nzl, PetscInt nzu, PetscInt nz, const PetscInt *ai, const PetscInt *aj, const PetscInt *adiag, PetscInt row) 4400d71ae5a4SJacob Faibussowitsch { 44018758e1faSBarry Smith PetscInt k; 44028758e1faSBarry Smith const PetscInt *vi; 44036e111a19SKarl Rupp 440417454e89SShri Abhyankar PetscFunctionBegin; 440517454e89SShri Abhyankar vi = aj + ai[row]; 440617454e89SShri Abhyankar for (k = 0; k < nzl; k++) cols[k] = vi[k]; 440717454e89SShri Abhyankar vi = aj + adiag[row]; 440817454e89SShri Abhyankar cols[nzl] = vi[0]; 440917454e89SShri Abhyankar vi = aj + adiag[row + 1] + 1; 441017454e89SShri Abhyankar for (k = 0; k < nzu; k++) cols[nzl + 1 + k] = vi[k]; 44113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 441217454e89SShri Abhyankar } 44136936b636SHong Zhang /* 4414a02bda8eSBarry Smith MatSeqAIJCheckInode_FactorLU - Check Inode for factored seqaij matrix. 4415a02bda8eSBarry Smith Modified from MatSeqAIJCheckInode(). 44166936b636SHong Zhang 44176936b636SHong Zhang Input Parameters: 4418abb87a52SBarry Smith . Mat A - ILU or LU matrix factor 4419abb87a52SBarry Smith 44206936b636SHong Zhang */ 4421d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJCheckInode_FactorLU(Mat A) 4422d71ae5a4SJacob Faibussowitsch { 4423019b515eSShri Abhyankar Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 4424019b515eSShri Abhyankar PetscInt i, j, m, nzl1, nzu1, nzl2, nzu2, nzx, nzy, node_count, blk_size; 44258758e1faSBarry Smith PetscInt *cols1, *cols2, *ns; 44268758e1faSBarry Smith const PetscInt *ai = a->i, *aj = a->j, *adiag = a->diag; 4427ace3abfcSBarry Smith PetscBool flag; 4428019b515eSShri Abhyankar 4429019b515eSShri Abhyankar PetscFunctionBegin; 44303ba16761SJacob Faibussowitsch if (!a->inode.use) PetscFunctionReturn(PETSC_SUCCESS); 44313ba16761SJacob Faibussowitsch if (a->inode.checked) PetscFunctionReturn(PETSC_SUCCESS); 4432019b515eSShri Abhyankar 4433019b515eSShri Abhyankar m = A->rmap->n; 44342205254eSKarl Rupp if (a->inode.size) ns = a->inode.size; 443548a46eb9SPierre Jolivet else PetscCall(PetscMalloc1(m + 1, &ns)); 4436019b515eSShri Abhyankar 4437019b515eSShri Abhyankar i = 0; 4438019b515eSShri Abhyankar node_count = 0; 44399566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &cols1, m, &cols2)); 4440019b515eSShri Abhyankar while (i < m) { /* For each row */ 4441019b515eSShri Abhyankar nzl1 = ai[i + 1] - ai[i]; /* Number of nonzeros in L */ 4442019b515eSShri Abhyankar nzu1 = adiag[i] - adiag[i + 1] - 1; /* Number of nonzeros in U excluding diagonal*/ 4443019b515eSShri Abhyankar nzx = nzl1 + nzu1 + 1; 44443ba16761SJacob Faibussowitsch PetscCall(MatGetRow_FactoredLU(cols1, nzl1, nzu1, nzx, ai, aj, adiag, i)); 4445019b515eSShri Abhyankar 4446019b515eSShri Abhyankar /* Limits the number of elements in a node to 'a->inode.limit' */ 4447019b515eSShri Abhyankar for (j = i + 1, blk_size = 1; j < m && blk_size < a->inode.limit; ++j, ++blk_size) { 4448019b515eSShri Abhyankar nzl2 = ai[j + 1] - ai[j]; 4449019b515eSShri Abhyankar nzu2 = adiag[j] - adiag[j + 1] - 1; 4450019b515eSShri Abhyankar nzy = nzl2 + nzu2 + 1; 4451019b515eSShri Abhyankar if (nzy != nzx) break; 44529566063dSJacob Faibussowitsch PetscCall(MatGetRow_FactoredLU(cols2, nzl2, nzu2, nzy, ai, aj, adiag, j)); 44539566063dSJacob Faibussowitsch PetscCall(PetscArraycmp(cols1, cols2, nzx, &flag)); 44548758e1faSBarry Smith if (!flag) break; 4455019b515eSShri Abhyankar } 4456019b515eSShri Abhyankar ns[node_count++] = blk_size; 4457019b515eSShri Abhyankar i = j; 4458019b515eSShri Abhyankar } 44599566063dSJacob Faibussowitsch PetscCall(PetscFree2(cols1, cols2)); 4460019b515eSShri Abhyankar /* If not enough inodes found,, do not use inode version of the routines */ 4461be6adb11SBarry Smith if (!m || node_count > .8 * m) { 44629566063dSJacob Faibussowitsch PetscCall(PetscFree(ns)); 44632205254eSKarl Rupp 4464019b515eSShri Abhyankar a->inode.node_count = 0; 44650298fd71SBarry Smith a->inode.size = NULL; 4466019b515eSShri Abhyankar a->inode.use = PETSC_FALSE; 44672205254eSKarl Rupp 44689566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Found %" PetscInt_FMT " nodes out of %" PetscInt_FMT " rows. Not using Inode routines\n", node_count, m)); 4469019b515eSShri Abhyankar } else { 4470f4259b30SLisandro Dalcin A->ops->mult = NULL; 4471f4259b30SLisandro Dalcin A->ops->sor = NULL; 4472f4259b30SLisandro Dalcin A->ops->multadd = NULL; 4473f4259b30SLisandro Dalcin A->ops->getrowij = NULL; 4474f4259b30SLisandro Dalcin A->ops->restorerowij = NULL; 4475f4259b30SLisandro Dalcin A->ops->getcolumnij = NULL; 4476f4259b30SLisandro Dalcin A->ops->restorecolumnij = NULL; 4477f4259b30SLisandro Dalcin A->ops->coloringpatch = NULL; 4478f4259b30SLisandro Dalcin A->ops->multdiagonalblock = NULL; 4479019b515eSShri Abhyankar a->inode.node_count = node_count; 4480019b515eSShri Abhyankar a->inode.size = ns; 44812205254eSKarl Rupp 44829566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Found %" PetscInt_FMT " nodes of %" PetscInt_FMT ". Limit used: %" PetscInt_FMT ". Using Inode routines\n", node_count, m, a->inode.limit)); 4483019b515eSShri Abhyankar } 4484be6adb11SBarry Smith a->inode.checked = PETSC_TRUE; 44853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4486019b515eSShri Abhyankar } 4487019b515eSShri Abhyankar 4488d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJInvalidateDiagonal_Inode(Mat A) 4489d71ae5a4SJacob Faibussowitsch { 4490acf2f550SJed Brown Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 4491acf2f550SJed Brown 4492acf2f550SJed Brown PetscFunctionBegin; 4493acf2f550SJed Brown a->inode.ibdiagvalid = PETSC_FALSE; 44943ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4495acf2f550SJed Brown } 4496acf2f550SJed Brown 44974c1414c8SBarry Smith /* 44984c1414c8SBarry Smith This is really ugly. if inodes are used this replaces the 44994c1414c8SBarry Smith permutations with ones that correspond to rows/cols of the matrix 45004c1414c8SBarry Smith rather then inode blocks 45014c1414c8SBarry Smith */ 4502d71ae5a4SJacob Faibussowitsch PetscErrorCode MatInodeAdjustForInodes(Mat A, IS *rperm, IS *cperm) 4503d71ae5a4SJacob Faibussowitsch { 45044c1414c8SBarry Smith PetscFunctionBegin; 4505cac4c232SBarry Smith PetscTryMethod(A, "MatInodeAdjustForInodes_C", (Mat, IS *, IS *), (A, rperm, cperm)); 45063ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 45074c1414c8SBarry Smith } 45084c1414c8SBarry Smith 4509d71ae5a4SJacob Faibussowitsch PetscErrorCode MatInodeAdjustForInodes_SeqAIJ_Inode(Mat A, IS *rperm, IS *cperm) 4510d71ae5a4SJacob Faibussowitsch { 45114c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 45125d0c19d7SBarry Smith PetscInt m = A->rmap->n, n = A->cmap->n, i, j, nslim_row = a->inode.node_count; 45135d0c19d7SBarry Smith const PetscInt *ridx, *cidx; 45144c1414c8SBarry Smith PetscInt row, col, *permr, *permc, *ns_row = a->inode.size, *tns, start_val, end_val, indx; 45154c1414c8SBarry Smith PetscInt nslim_col, *ns_col; 45164c1414c8SBarry Smith IS ris = *rperm, cis = *cperm; 45174c1414c8SBarry Smith 45184c1414c8SBarry Smith PetscFunctionBegin; 45193ba16761SJacob Faibussowitsch if (!a->inode.size) PetscFunctionReturn(PETSC_SUCCESS); /* no inodes so return */ 45203ba16761SJacob Faibussowitsch if (a->inode.node_count == m) PetscFunctionReturn(PETSC_SUCCESS); /* all inodes are of size 1 */ 45214c1414c8SBarry Smith 45229566063dSJacob Faibussowitsch PetscCall(MatCreateColInode_Private(A, &nslim_col, &ns_col)); 45239566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(((nslim_row > nslim_col) ? nslim_row : nslim_col) + 1, &tns)); 45249566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &permr, n, &permc)); 45254c1414c8SBarry Smith 45269566063dSJacob Faibussowitsch PetscCall(ISGetIndices(ris, &ridx)); 45279566063dSJacob Faibussowitsch PetscCall(ISGetIndices(cis, &cidx)); 45284c1414c8SBarry Smith 45294c1414c8SBarry Smith /* Form the inode structure for the rows of permuted matric using inv perm*/ 45304c1414c8SBarry Smith for (i = 0, tns[0] = 0; i < nslim_row; ++i) tns[i + 1] = tns[i] + ns_row[i]; 45314c1414c8SBarry Smith 45324c1414c8SBarry Smith /* Construct the permutations for rows*/ 45334c1414c8SBarry Smith for (i = 0, row = 0; i < nslim_row; ++i) { 45344c1414c8SBarry Smith indx = ridx[i]; 45354c1414c8SBarry Smith start_val = tns[indx]; 45364c1414c8SBarry Smith end_val = tns[indx + 1]; 45374c1414c8SBarry Smith for (j = start_val; j < end_val; ++j, ++row) permr[row] = j; 45384c1414c8SBarry Smith } 45394c1414c8SBarry Smith 45404c1414c8SBarry Smith /* Form the inode structure for the columns of permuted matrix using inv perm*/ 45414c1414c8SBarry Smith for (i = 0, tns[0] = 0; i < nslim_col; ++i) tns[i + 1] = tns[i] + ns_col[i]; 45424c1414c8SBarry Smith 45434c1414c8SBarry Smith /* Construct permutations for columns */ 45444c1414c8SBarry Smith for (i = 0, col = 0; i < nslim_col; ++i) { 45454c1414c8SBarry Smith indx = cidx[i]; 45464c1414c8SBarry Smith start_val = tns[indx]; 45474c1414c8SBarry Smith end_val = tns[indx + 1]; 45484c1414c8SBarry Smith for (j = start_val; j < end_val; ++j, ++col) permc[col] = j; 45494c1414c8SBarry Smith } 45504c1414c8SBarry Smith 45519566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, n, permr, PETSC_COPY_VALUES, rperm)); 45529566063dSJacob Faibussowitsch PetscCall(ISSetPermutation(*rperm)); 45539566063dSJacob Faibussowitsch PetscCall(ISCreateGeneral(PETSC_COMM_SELF, n, permc, PETSC_COPY_VALUES, cperm)); 45549566063dSJacob Faibussowitsch PetscCall(ISSetPermutation(*cperm)); 45554c1414c8SBarry Smith 45569566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(ris, &ridx)); 45579566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(cis, &cidx)); 45584c1414c8SBarry Smith 45599566063dSJacob Faibussowitsch PetscCall(PetscFree(ns_col)); 45609566063dSJacob Faibussowitsch PetscCall(PetscFree2(permr, permc)); 45619566063dSJacob Faibussowitsch PetscCall(ISDestroy(&cis)); 45629566063dSJacob Faibussowitsch PetscCall(ISDestroy(&ris)); 45639566063dSJacob Faibussowitsch PetscCall(PetscFree(tns)); 45643ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 45654c1414c8SBarry Smith } 45664c1414c8SBarry Smith 45674c1414c8SBarry Smith /*@C 456811a5261eSBarry Smith MatInodeGetInodeSizes - Returns the inode information of a matrix with inodes 45694c1414c8SBarry Smith 45703f9fe445SBarry Smith Not Collective 45714c1414c8SBarry Smith 45724c1414c8SBarry Smith Input Parameter: 457311a5261eSBarry Smith . A - the Inode matrix or matrix derived from the Inode class -- e.g., `MATSEQAIJ` 45744c1414c8SBarry Smith 4575d8d19677SJose E. Roman Output Parameters: 45764c1414c8SBarry Smith + node_count - no of inodes present in the matrix. 45772ef1f0ffSBarry Smith . sizes - an array of size `node_count`, with the sizes of each inode. 45784c1414c8SBarry Smith - limit - the max size used to generate the inodes. 45794c1414c8SBarry Smith 45804c1414c8SBarry Smith Level: advanced 45814c1414c8SBarry Smith 458211a5261eSBarry Smith Note: 45834c1414c8SBarry Smith It should be called after the matrix is assembled. 45844c1414c8SBarry Smith The contents of the sizes[] array should not be changed. 45852ef1f0ffSBarry Smith `NULL` may be passed for information not needed 45864c1414c8SBarry Smith 45872ef1f0ffSBarry Smith .seealso: [](chapter_matrices), `Mat`, `MatGetInfo()` 45884c1414c8SBarry Smith @*/ 4589d71ae5a4SJacob Faibussowitsch PetscErrorCode MatInodeGetInodeSizes(Mat A, PetscInt *node_count, PetscInt *sizes[], PetscInt *limit) 4590d71ae5a4SJacob Faibussowitsch { 45915f80ce2aSJacob Faibussowitsch PetscErrorCode (*f)(Mat, PetscInt *, PetscInt **, PetscInt *); 45924c1414c8SBarry Smith 45934c1414c8SBarry Smith PetscFunctionBegin; 45945f80ce2aSJacob Faibussowitsch PetscCheck(A->assembled, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix"); 45959566063dSJacob Faibussowitsch PetscCall(PetscObjectQueryFunction((PetscObject)A, "MatInodeGetInodeSizes_C", &f)); 45969566063dSJacob Faibussowitsch if (f) PetscCall((*f)(A, node_count, sizes, limit)); 45973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 45984c1414c8SBarry Smith } 45994c1414c8SBarry Smith 4600d71ae5a4SJacob Faibussowitsch PetscErrorCode MatInodeGetInodeSizes_SeqAIJ_Inode(Mat A, PetscInt *node_count, PetscInt *sizes[], PetscInt *limit) 4601d71ae5a4SJacob Faibussowitsch { 46024c1414c8SBarry Smith Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 46034c1414c8SBarry Smith 46044c1414c8SBarry Smith PetscFunctionBegin; 46054c1414c8SBarry Smith if (node_count) *node_count = a->inode.node_count; 46064c1414c8SBarry Smith if (sizes) *sizes = a->inode.size; 46074c1414c8SBarry Smith if (limit) *limit = a->inode.limit; 46083ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 46094c1414c8SBarry Smith } 4610