xref: /petsc/src/mat/impls/aij/seq/kokkos/aijkok.kokkos.cxx (revision 07425a8d4172ec73b7b53c5ce4d6ba1b92fe45cf)
1e36ced11SJunchao Zhang #include <petsc_kokkos.hpp>
211d22bbfSJunchao Zhang #include <petscvec_kokkos.hpp>
3c0c276a7Ssdargavi #include <petscmat_kokkos.hpp>
4076ba34aSJunchao Zhang #include <petscpkg_version.h>
5152b3e56SJunchao Zhang #include <petsc/private/petscimpl.h>
642550becSJunchao Zhang #include <petsc/private/sfimpl.h>
7aac854edSJunchao Zhang #include <petsc/private/kokkosimpl.hpp>
87233ce55SJed Brown #include <petscsys.h>
98c3ff71bSJunchao Zhang 
108c3ff71bSJunchao Zhang #include <Kokkos_Core.hpp>
11f0cf5187SStefano Zampini #include <KokkosBlas.hpp>
128c3ff71bSJunchao Zhang #include <KokkosSparse_CrsMatrix.hpp>
13cc6e31f1SJunchao Zhang 
14cc6e31f1SJunchao Zhang // To suppress compiler warnings:
15cc6e31f1SJunchao Zhang // /path/include/KokkosSparse_spmv_bsrmatrix_tpl_spec_decl.hpp:434:63:
16cc6e31f1SJunchao Zhang // warning: 'cusparseStatus_t cusparseDbsrmm(cusparseHandle_t, cusparseDirection_t, cusparseOperation_t,
17cc6e31f1SJunchao Zhang // cusparseOperation_t, int, int, int, int, const double*, cusparseMatDescr_t, const double*, const int*, const int*,
18cc6e31f1SJunchao Zhang // int, const double*, int, const double*, double*, int)' is deprecated: please use cusparseSpMM instead [-Wdeprecated-declarations]
192695cf96SNuno Nobre #define DISABLE_CUSPARSE_DEPRECATED
208c3ff71bSJunchao Zhang #include <KokkosSparse_spmv.hpp>
21cc6e31f1SJunchao Zhang 
2286a27549SJunchao Zhang #include <KokkosSparse_spiluk.hpp>
2386a27549SJunchao Zhang #include <KokkosSparse_sptrsv.hpp>
24076ba34aSJunchao Zhang #include <KokkosSparse_spgemm.hpp>
25076ba34aSJunchao Zhang #include <KokkosSparse_spadd.hpp>
269d13fa56SJunchao Zhang #include <KokkosBatched_LU_Decl.hpp>
279d13fa56SJunchao Zhang #include <KokkosBatched_InverseLU_Decl.hpp>
2886a27549SJunchao Zhang 
2942550becSJunchao Zhang #include <../src/mat/impls/aij/seq/kokkos/aijkok.hpp>
308c3ff71bSJunchao Zhang 
310e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_GE(3, 7, 0)
32f98996d3SJunchao Zhang   #include <KokkosSparse_Utils.hpp>
33f98996d3SJunchao Zhang using KokkosSparse::sort_crs_matrix;
349371c9d4SSatish Balay using KokkosSparse::Impl::transpose_matrix;
35f98996d3SJunchao Zhang #else
36f98996d3SJunchao Zhang   #include <KokkosKernels_Sorting.hpp>
37f98996d3SJunchao Zhang using KokkosKernels::sort_crs_matrix;
389371c9d4SSatish Balay using KokkosKernels::Impl::transpose_matrix;
39f98996d3SJunchao Zhang #endif
40f98996d3SJunchao Zhang 
41aac854edSJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_GE(4, 6, 0)
42aac854edSJunchao Zhang using KokkosSparse::spiluk_symbolic;
43aac854edSJunchao Zhang using KokkosSparse::spiluk_numeric;
44aac854edSJunchao Zhang using KokkosSparse::sptrsv_symbolic;
45aac854edSJunchao Zhang using KokkosSparse::sptrsv_solve;
46aac854edSJunchao Zhang using KokkosSparse::Experimental::SPTRSVAlgorithm;
47aac854edSJunchao Zhang using KokkosSparse::Experimental::SPILUKAlgorithm;
48aac854edSJunchao Zhang #else
49aac854edSJunchao Zhang using KokkosSparse::Experimental::spiluk_symbolic;
50aac854edSJunchao Zhang using KokkosSparse::Experimental::spiluk_numeric;
51aac854edSJunchao Zhang using KokkosSparse::Experimental::sptrsv_symbolic;
52aac854edSJunchao Zhang using KokkosSparse::Experimental::sptrsv_solve;
53aac854edSJunchao Zhang using KokkosSparse::Experimental::SPTRSVAlgorithm;
54aac854edSJunchao Zhang using KokkosSparse::Experimental::SPILUKAlgorithm;
55aac854edSJunchao Zhang #endif
56aac854edSJunchao Zhang 
578c3ff71bSJunchao Zhang static PetscErrorCode MatSetOps_SeqAIJKokkos(Mat); /* Forward declaration */
588c3ff71bSJunchao Zhang 
59076ba34aSJunchao Zhang /* MatAssemblyEnd_SeqAIJKokkos() happens when we finalized nonzeros of the matrix, either after
60076ba34aSJunchao Zhang    we assembled the matrix on host, or after we directly produced the matrix data on device (ex., through MatMatMult).
61076ba34aSJunchao Zhang    In the latter case, it is important to set a_dual's sync state correctly.
62076ba34aSJunchao Zhang  */
63d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatAssemblyEnd_SeqAIJKokkos(Mat A, MatAssemblyType mode)
64d71ae5a4SJacob Faibussowitsch {
65076ba34aSJunchao Zhang   Mat_SeqAIJ       *aijseq;
66076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok;
678c3ff71bSJunchao Zhang 
688c3ff71bSJunchao Zhang   PetscFunctionBegin;
693ba16761SJacob Faibussowitsch   if (mode == MAT_FLUSH_ASSEMBLY) PetscFunctionReturn(PETSC_SUCCESS);
709566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd_SeqAIJ(A, mode));
71076ba34aSJunchao Zhang 
72076ba34aSJunchao Zhang   aijseq = static_cast<Mat_SeqAIJ *>(A->data);
73076ba34aSJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
74076ba34aSJunchao Zhang 
75076ba34aSJunchao Zhang   /* If aijkok does not exist, we just copy i, j to device.
76076ba34aSJunchao Zhang      If aijkok already exists, but the device's nonzero pattern does not match with the host's, we assume the latest data is on host.
77076ba34aSJunchao Zhang      In both cases, we build a new aijkok structure.
78076ba34aSJunchao Zhang   */
79076ba34aSJunchao Zhang   if (!aijkok || aijkok->nonzerostate != A->nonzerostate) { /* aijkok might not exist yet or nonzero pattern has changed */
8093a54799SPierre Jolivet     if (aijkok && aijkok->host_aij_allocated_by_kokkos) {   /* Avoid accidentally freeing much needed a,i,j on host when deleting aijkok */
81d1c799ffSJunchao Zhang       PetscCall(PetscShmgetAllocateArray(aijkok->nrows() + 1, sizeof(PetscInt), (void **)&aijseq->i));
82d1c799ffSJunchao Zhang       PetscCall(PetscShmgetAllocateArray(aijkok->nnz(), sizeof(PetscInt), (void **)&aijseq->j));
83d1c799ffSJunchao Zhang       PetscCall(PetscShmgetAllocateArray(aijkok->nnz(), sizeof(PetscInt), (void **)&aijseq->a));
84d1c799ffSJunchao Zhang       PetscCall(PetscArraycpy(aijseq->i, aijkok->i_host_data(), aijkok->nrows() + 1));
85d1c799ffSJunchao Zhang       PetscCall(PetscArraycpy(aijseq->j, aijkok->j_host_data(), aijkok->nnz()));
86d1c799ffSJunchao Zhang       PetscCall(PetscArraycpy(aijseq->a, aijkok->a_host_data(), aijkok->nnz()));
87d1c799ffSJunchao Zhang       aijseq->free_a  = PETSC_TRUE;
88d1c799ffSJunchao Zhang       aijseq->free_ij = PETSC_TRUE;
89d1c799ffSJunchao Zhang       /* This arises from MatCreateSeqAIJKokkosWithKokkosCsrMatrix() used in MatMatMult, where
90d1c799ffSJunchao Zhang          we have the CsrMatrix on device first and then copy to host, followed by
91d1c799ffSJunchao Zhang          MatSetMPIAIJWithSplitSeqAIJ() with garray = NULL.
92d1c799ffSJunchao Zhang          One could improve it by not using NULL garray.
93d1c799ffSJunchao Zhang       */
94d1c799ffSJunchao Zhang     }
95076ba34aSJunchao Zhang     delete aijkok;
96f4747e26SJunchao Zhang     aijkok   = new Mat_SeqAIJKokkos(A->rmap->n, A->cmap->n, aijseq, A->nonzerostate, PETSC_FALSE /*don't copy mat values to device*/);
97076ba34aSJunchao Zhang     A->spptr = aijkok;
98f4747e26SJunchao Zhang   } else if (A->rmap->n && aijkok->diag_dual.extent(0) == 0) { // MatProduct might directly produce AIJ on device, but not the diag.
99f4747e26SJunchao Zhang     MatRowMapKokkosViewHost diag_h(aijseq->diag, A->rmap->n);
100f4747e26SJunchao Zhang     auto                    diag_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), diag_h);
101f4747e26SJunchao Zhang     aijkok->diag_dual              = MatRowMapKokkosDualView(diag_d, diag_h);
102076ba34aSJunchao Zhang   }
1033ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1048c3ff71bSJunchao Zhang }
1058c3ff71bSJunchao Zhang 
10686a27549SJunchao Zhang /* Sync CSR data to device if not yet */
107d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatSeqAIJKokkosSyncDevice(Mat A)
108d71ae5a4SJacob Faibussowitsch {
1098c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
1108c3ff71bSJunchao Zhang 
1118c3ff71bSJunchao Zhang   PetscFunctionBegin;
112aaa8cc7dSPierre Jolivet   PetscCheck(A->factortype == MAT_FACTOR_NONE, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Can't sync factorized matrix from host to device");
1135f80ce2aSJacob Faibussowitsch   PetscCheck(aijkok, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr");
114076ba34aSJunchao Zhang   if (aijkok->a_dual.need_sync_device()) {
115f3d3cd90SZach Atkins     PetscCall(KokkosDualViewSyncDevice(aijkok->a_dual, PetscGetKokkosExecutionSpace()));
116580c7c76SPierre Jolivet     aijkok->transpose_updated = PETSC_FALSE; /* values of the transpose is out-of-date */
11786a27549SJunchao Zhang     aijkok->hermitian_updated = PETSC_FALSE;
1188c3ff71bSJunchao Zhang   }
1193ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1208c3ff71bSJunchao Zhang }
1218c3ff71bSJunchao Zhang 
122076ba34aSJunchao Zhang /* Mark the CSR data on device as modified */
123d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatSeqAIJKokkosModifyDevice(Mat A)
124d71ae5a4SJacob Faibussowitsch {
12586a27549SJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
12686a27549SJunchao Zhang 
12786a27549SJunchao Zhang   PetscFunctionBegin;
1285f80ce2aSJacob Faibussowitsch   PetscCheck(A->factortype == MAT_FACTOR_NONE, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Not supported for factorized matries");
12986a27549SJunchao Zhang   aijkok->a_dual.clear_sync_state();
13086a27549SJunchao Zhang   aijkok->a_dual.modify_device();
13186a27549SJunchao Zhang   aijkok->transpose_updated = PETSC_FALSE;
13286a27549SJunchao Zhang   aijkok->hermitian_updated = PETSC_FALSE;
1339566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
1343ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
13586a27549SJunchao Zhang }
13686a27549SJunchao Zhang 
137d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJKokkosSyncHost(Mat A)
138d71ae5a4SJacob Faibussowitsch {
139f0cf5187SStefano Zampini   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
1404df4a32cSJunchao Zhang   auto              exec   = PetscGetKokkosExecutionSpace();
141f0cf5187SStefano Zampini 
142f0cf5187SStefano Zampini   PetscFunctionBegin;
143f0cf5187SStefano Zampini   PetscCheckTypeName(A, MATSEQAIJKOKKOS);
14486a27549SJunchao Zhang   /* We do not expect one needs factors on host  */
145aaa8cc7dSPierre Jolivet   PetscCheck(A->factortype == MAT_FACTOR_NONE, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Can't sync factorized matrix from device to host");
1465f80ce2aSJacob Faibussowitsch   PetscCheck(aijkok, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing AIJKOK");
147f3d3cd90SZach Atkins   PetscCall(KokkosDualViewSyncHost(aijkok->a_dual, exec));
1483ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
149f0cf5187SStefano Zampini }
150f0cf5187SStefano Zampini 
151d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetArray_SeqAIJKokkos(Mat A, PetscScalar *array[])
152d71ae5a4SJacob Faibussowitsch {
153076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
154f0cf5187SStefano Zampini 
155f0cf5187SStefano Zampini   PetscFunctionBegin;
1565519a089SJose E. Roman   /* aijkok contains valid pointers only if the host's nonzerostate matches with the device's.
1575519a089SJose E. Roman     Calling MatSeqAIJSetPreallocation() or MatSetValues() on host, where aijseq->{i,j,a} might be
1585519a089SJose E. Roman     reallocated, will lead to stale {i,j,a}_dual in aijkok. In both operations, the hosts's nonzerostate
1595519a089SJose E. Roman     must have been updated. The stale aijkok will be rebuilt during MatAssemblyEnd.
1605519a089SJose E. Roman   */
1615519a089SJose E. Roman   if (aijkok && A->nonzerostate == aijkok->nonzerostate) {
162f3d3cd90SZach Atkins     PetscCall(KokkosDualViewSyncHost(aijkok->a_dual, PetscGetKokkosExecutionSpace()));
163076ba34aSJunchao Zhang     *array = aijkok->a_dual.view_host().data();
164076ba34aSJunchao Zhang   } else { /* Happens when calling MatSetValues on a newly created matrix */
165076ba34aSJunchao Zhang     *array = static_cast<Mat_SeqAIJ *>(A->data)->a;
166076ba34aSJunchao Zhang   }
1673ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
168076ba34aSJunchao Zhang }
169076ba34aSJunchao Zhang 
170d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJRestoreArray_SeqAIJKokkos(Mat A, PetscScalar *array[])
171d71ae5a4SJacob Faibussowitsch {
172076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
173076ba34aSJunchao Zhang 
174076ba34aSJunchao Zhang   PetscFunctionBegin;
1755519a089SJose E. Roman   if (aijkok && A->nonzerostate == aijkok->nonzerostate) aijkok->a_dual.modify_host();
1763ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
177076ba34aSJunchao Zhang }
178076ba34aSJunchao Zhang 
179d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetArrayRead_SeqAIJKokkos(Mat A, const PetscScalar *array[])
180d71ae5a4SJacob Faibussowitsch {
181076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
182076ba34aSJunchao Zhang 
183076ba34aSJunchao Zhang   PetscFunctionBegin;
1845519a089SJose E. Roman   if (aijkok && A->nonzerostate == aijkok->nonzerostate) {
185f3d3cd90SZach Atkins     PetscCall(KokkosDualViewSyncHost(aijkok->a_dual, PetscGetKokkosExecutionSpace()));
186076ba34aSJunchao Zhang     *array = aijkok->a_dual.view_host().data();
1872328674fSJunchao Zhang   } else {
1882328674fSJunchao Zhang     *array = static_cast<Mat_SeqAIJ *>(A->data)->a;
1892328674fSJunchao Zhang   }
1903ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
191076ba34aSJunchao Zhang }
192076ba34aSJunchao Zhang 
193d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJRestoreArrayRead_SeqAIJKokkos(Mat A, const PetscScalar *array[])
194d71ae5a4SJacob Faibussowitsch {
195076ba34aSJunchao Zhang   PetscFunctionBegin;
196076ba34aSJunchao Zhang   *array = NULL;
1973ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
198076ba34aSJunchao Zhang }
199076ba34aSJunchao Zhang 
200d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetArrayWrite_SeqAIJKokkos(Mat A, PetscScalar *array[])
201d71ae5a4SJacob Faibussowitsch {
202076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
203076ba34aSJunchao Zhang 
204076ba34aSJunchao Zhang   PetscFunctionBegin;
2055519a089SJose E. Roman   if (aijkok && A->nonzerostate == aijkok->nonzerostate) {
206076ba34aSJunchao Zhang     *array = aijkok->a_dual.view_host().data();
2072328674fSJunchao Zhang   } else { /* Ex. happens with MatZeroEntries on a preallocated but not assembled matrix */
2082328674fSJunchao Zhang     *array = static_cast<Mat_SeqAIJ *>(A->data)->a;
2092328674fSJunchao Zhang   }
2103ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
211076ba34aSJunchao Zhang }
212076ba34aSJunchao Zhang 
213d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJRestoreArrayWrite_SeqAIJKokkos(Mat A, PetscScalar *array[])
214d71ae5a4SJacob Faibussowitsch {
215076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
216076ba34aSJunchao Zhang 
217076ba34aSJunchao Zhang   PetscFunctionBegin;
2185519a089SJose E. Roman   if (aijkok && A->nonzerostate == aijkok->nonzerostate) {
219076ba34aSJunchao Zhang     aijkok->a_dual.clear_sync_state();
220076ba34aSJunchao Zhang     aijkok->a_dual.modify_host();
2212328674fSJunchao Zhang   }
2223ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
223f0cf5187SStefano Zampini }
224f0cf5187SStefano Zampini 
225d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetCSRAndMemType_SeqAIJKokkos(Mat A, const PetscInt **i, const PetscInt **j, PetscScalar **a, PetscMemType *mtype)
226d71ae5a4SJacob Faibussowitsch {
2277ee59b9bSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
2287ee59b9bSJunchao Zhang 
2297ee59b9bSJunchao Zhang   PetscFunctionBegin;
2307ee59b9bSJunchao Zhang   PetscCheck(aijkok != NULL, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "aijkok is NULL");
2317ee59b9bSJunchao Zhang 
2327ee59b9bSJunchao Zhang   if (i) *i = aijkok->i_device_data();
2337ee59b9bSJunchao Zhang   if (j) *j = aijkok->j_device_data();
2347ee59b9bSJunchao Zhang   if (a) {
235f3d3cd90SZach Atkins     PetscCall(KokkosDualViewSyncDevice(aijkok->a_dual, PetscGetKokkosExecutionSpace()));
2367ee59b9bSJunchao Zhang     *a = aijkok->a_device_data();
2377ee59b9bSJunchao Zhang   }
2387ee59b9bSJunchao Zhang   if (mtype) *mtype = PETSC_MEMTYPE_KOKKOS;
2393ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2407ee59b9bSJunchao Zhang }
2417ee59b9bSJunchao Zhang 
24203db1824SAlex Lindsay static PetscErrorCode MatGetCurrentMemType_SeqAIJKokkos(PETSC_UNUSED Mat A, PetscMemType *mtype)
24303db1824SAlex Lindsay {
24403db1824SAlex Lindsay   PetscFunctionBegin;
24503db1824SAlex Lindsay   *mtype = PETSC_MEMTYPE_KOKKOS;
24603db1824SAlex Lindsay   PetscFunctionReturn(PETSC_SUCCESS);
24703db1824SAlex Lindsay }
24803db1824SAlex Lindsay 
2490e3ece09SJunchao Zhang /*
2500e3ece09SJunchao Zhang   Generate the sparsity pattern of a MatSeqAIJKokkos matrix's transpose on device.
2510e3ece09SJunchao Zhang 
2520e3ece09SJunchao Zhang   Input Parameter:
2530e3ece09SJunchao Zhang .  A       - the MATSEQAIJKOKKOS matrix
2540e3ece09SJunchao Zhang 
2550e3ece09SJunchao Zhang   Output Parameters:
2560e3ece09SJunchao Zhang +  perm_d - the permutation array on device, which connects Ta(i) = Aa(perm(i))
257aaa8cc7dSPierre Jolivet -  T_d    - the transpose on device, whose value array is allocated but not initialized
2580e3ece09SJunchao Zhang */
2590e3ece09SJunchao Zhang static PetscErrorCode MatSeqAIJKokkosGenerateTransposeStructure(Mat A, MatRowMapKokkosView &perm_d, KokkosCsrMatrix &T_d)
260d71ae5a4SJacob Faibussowitsch {
2610e3ece09SJunchao Zhang   Mat_SeqAIJ             *aseq = static_cast<Mat_SeqAIJ *>(A->data);
2620e3ece09SJunchao Zhang   PetscInt                nz = aseq->nz, m = A->rmap->N, n = A->cmap->n;
2630e3ece09SJunchao Zhang   const PetscInt         *Ai = aseq->i, *Aj = aseq->j;
2647b8d4ba6SJunchao Zhang   MatRowMapKokkosViewHost Ti_h(NoInit("Ti"), n + 1);
2650e3ece09SJunchao Zhang   MatRowMapType          *Ti = Ti_h.data();
2667b8d4ba6SJunchao Zhang   MatColIdxKokkosViewHost Tj_h(NoInit("Tj"), nz);
2677b8d4ba6SJunchao Zhang   MatRowMapKokkosViewHost perm_h(NoInit("permutation"), nz);
2680e3ece09SJunchao Zhang   PetscInt               *Tj   = Tj_h.data();
2690e3ece09SJunchao Zhang   PetscInt               *perm = perm_h.data();
2700e3ece09SJunchao Zhang   PetscInt               *offset;
271152b3e56SJunchao Zhang 
272152b3e56SJunchao Zhang   PetscFunctionBegin;
2730e3ece09SJunchao Zhang   // Populate Ti
2740e3ece09SJunchao Zhang   PetscCallCXX(Kokkos::deep_copy(Ti_h, 0));
2750e3ece09SJunchao Zhang   Ti++;
2760e3ece09SJunchao Zhang   for (PetscInt i = 0; i < nz; i++) Ti[Aj[i]]++;
2770e3ece09SJunchao Zhang   Ti--;
2780e3ece09SJunchao Zhang   for (PetscInt i = 0; i < n; i++) Ti[i + 1] += Ti[i];
2790e3ece09SJunchao Zhang 
2800e3ece09SJunchao Zhang   // Populate Tj and the permutation array
2810e3ece09SJunchao Zhang   PetscCall(PetscCalloc1(n, &offset)); // offset in each T row to fill in its column indices
2820e3ece09SJunchao Zhang   for (PetscInt i = 0; i < m; i++) {
2830e3ece09SJunchao Zhang     for (PetscInt j = Ai[i]; j < Ai[i + 1]; j++) { // A's (i,j) is T's (j,i)
2840e3ece09SJunchao Zhang       PetscInt r    = Aj[j];                       // row r of T
2850e3ece09SJunchao Zhang       PetscInt disp = Ti[r] + offset[r];
2860e3ece09SJunchao Zhang 
2870e3ece09SJunchao Zhang       Tj[disp]   = i; // col i of T
2880e3ece09SJunchao Zhang       perm[disp] = j;
2890e3ece09SJunchao Zhang       offset[r]++;
290076ba34aSJunchao Zhang     }
2910e3ece09SJunchao Zhang   }
2920e3ece09SJunchao Zhang   PetscCall(PetscFree(offset));
2930e3ece09SJunchao Zhang 
2940e3ece09SJunchao Zhang   // Sort each row of T, along with the permutation array
2950e3ece09SJunchao Zhang   for (PetscInt i = 0; i < n; i++) PetscCall(PetscSortIntWithArray(Ti[i + 1] - Ti[i], Tj + Ti[i], perm + Ti[i]));
2960e3ece09SJunchao Zhang 
2970e3ece09SJunchao Zhang   // Output perm and T on device
2980e3ece09SJunchao Zhang   auto Ti_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Ti_h);
2990e3ece09SJunchao Zhang   auto Tj_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Tj_h);
3000e3ece09SJunchao Zhang   PetscCallCXX(T_d = KokkosCsrMatrix("csrmatT", n, m, nz, MatScalarKokkosView("Ta", nz), Ti_d, Tj_d));
3010e3ece09SJunchao Zhang   PetscCallCXX(perm_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), perm_h));
3023ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
303152b3e56SJunchao Zhang }
304152b3e56SJunchao Zhang 
3050e3ece09SJunchao Zhang // Generate the transpose on device and cache it internally
3060e3ece09SJunchao Zhang // Note: KK transpose_matrix() does not have support symbolic/numeric transpose, so we do it on our own
3070e3ece09SJunchao Zhang PETSC_INTERN PetscErrorCode MatSeqAIJKokkosGenerateTranspose_Private(Mat A, KokkosCsrMatrix *csrmatT)
308d71ae5a4SJacob Faibussowitsch {
3090e3ece09SJunchao Zhang   Mat_SeqAIJ       *aseq = static_cast<Mat_SeqAIJ *>(A->data);
3100e3ece09SJunchao Zhang   Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
3110e3ece09SJunchao Zhang   PetscInt          nz = aseq->nz, m = A->rmap->N, n = A->cmap->n;
3120e3ece09SJunchao Zhang   KokkosCsrMatrix  &T = akok->csrmatT;
313152b3e56SJunchao Zhang 
314152b3e56SJunchao Zhang   PetscFunctionBegin;
3150e3ece09SJunchao Zhang   PetscCheck(akok, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr");
316f3d3cd90SZach Atkins   PetscCall(KokkosDualViewSyncDevice(akok->a_dual, PetscGetKokkosExecutionSpace())); // Sync A's values since we are going to access them on device
3170e3ece09SJunchao Zhang 
3180e3ece09SJunchao Zhang   const auto &Aa = akok->a_dual.view_device();
3190e3ece09SJunchao Zhang 
3200e3ece09SJunchao Zhang   if (A->symmetric == PETSC_BOOL3_TRUE) {
3210e3ece09SJunchao Zhang     *csrmatT = akok->csrmat;
3220e3ece09SJunchao Zhang   } else {
3230e3ece09SJunchao Zhang     // See if we already have a cached transpose and its value is up to date
3240e3ece09SJunchao Zhang     if (T.numRows() == n && T.numCols() == m) {  // this indicates csrmatT had been generated before, otherwise T has 0 rows/cols after construction
3250e3ece09SJunchao Zhang       if (!akok->transpose_updated) {            // if the value is out of date, update the cached version
3260e3ece09SJunchao Zhang         const auto &perm = akok->transpose_perm; // get the permutation array
3270e3ece09SJunchao Zhang         auto       &Ta   = T.values;
3280e3ece09SJunchao Zhang 
329d326c3f1SJunchao Zhang         PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt i) { Ta(i) = Aa(perm(i)); }));
330076ba34aSJunchao Zhang       }
3310e3ece09SJunchao Zhang     } else { // Generate T of size n x m for the first time
3320e3ece09SJunchao Zhang       MatRowMapKokkosView perm;
3330e3ece09SJunchao Zhang 
3340e3ece09SJunchao Zhang       PetscCall(MatSeqAIJKokkosGenerateTransposeStructure(A, perm, T));
3350e3ece09SJunchao Zhang       akok->transpose_perm = perm; // cache the perm in this matrix for reuse
336d326c3f1SJunchao Zhang       PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt i) { T.values(i) = Aa(perm(i)); }));
3370e3ece09SJunchao Zhang     }
3380e3ece09SJunchao Zhang     akok->transpose_updated = PETSC_TRUE;
3390e3ece09SJunchao Zhang     *csrmatT                = akok->csrmatT;
3400e3ece09SJunchao Zhang   }
3410e3ece09SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
3420e3ece09SJunchao Zhang }
3430e3ece09SJunchao Zhang 
3440e3ece09SJunchao Zhang // Generate the Hermitian on device and cache it internally
3450e3ece09SJunchao Zhang static PetscErrorCode MatSeqAIJKokkosGenerateHermitian_Private(Mat A, KokkosCsrMatrix *csrmatH)
3460e3ece09SJunchao Zhang {
3470e3ece09SJunchao Zhang   Mat_SeqAIJ       *aseq = static_cast<Mat_SeqAIJ *>(A->data);
3480e3ece09SJunchao Zhang   Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
3490e3ece09SJunchao Zhang   PetscInt          nz = aseq->nz, m = A->rmap->N, n = A->cmap->n;
3500e3ece09SJunchao Zhang   KokkosCsrMatrix  &T = akok->csrmatH;
3510e3ece09SJunchao Zhang 
3520e3ece09SJunchao Zhang   PetscFunctionBegin;
3530e3ece09SJunchao Zhang   PetscCheck(akok, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr");
354f3d3cd90SZach Atkins   PetscCall(KokkosDualViewSyncDevice(akok->a_dual, PetscGetKokkosExecutionSpace())); // Sync A's values since we are going to access them on device
3550e3ece09SJunchao Zhang 
3560e3ece09SJunchao Zhang   const auto &Aa = akok->a_dual.view_device();
3570e3ece09SJunchao Zhang 
3580e3ece09SJunchao Zhang   if (A->hermitian == PETSC_BOOL3_TRUE) {
3590e3ece09SJunchao Zhang     *csrmatH = akok->csrmat;
3600e3ece09SJunchao Zhang   } else {
3610e3ece09SJunchao Zhang     // See if we already have a cached hermitian and its value is up to date
3620e3ece09SJunchao Zhang     if (T.numRows() == n && T.numCols() == m) {  // this indicates csrmatT had been generated before, otherwise T has 0 rows/cols after construction
3630e3ece09SJunchao Zhang       if (!akok->hermitian_updated) {            // if the value is out of date, update the cached version
3640e3ece09SJunchao Zhang         const auto &perm = akok->transpose_perm; // get the permutation array
3650e3ece09SJunchao Zhang         auto       &Ta   = T.values;
3660e3ece09SJunchao Zhang 
367d326c3f1SJunchao Zhang         PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt i) { Ta(i) = PetscConj(Aa(perm(i))); }));
3680e3ece09SJunchao Zhang       }
3690e3ece09SJunchao Zhang     } else { // Generate T of size n x m for the first time
3700e3ece09SJunchao Zhang       MatRowMapKokkosView perm;
3710e3ece09SJunchao Zhang 
3720e3ece09SJunchao Zhang       PetscCall(MatSeqAIJKokkosGenerateTransposeStructure(A, perm, T));
3730e3ece09SJunchao Zhang       akok->transpose_perm = perm; // cache the perm in this matrix for reuse
374d326c3f1SJunchao Zhang       PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt i) { T.values(i) = PetscConj(Aa(perm(i))); }));
3750e3ece09SJunchao Zhang     }
3760e3ece09SJunchao Zhang     akok->hermitian_updated = PETSC_TRUE;
3770e3ece09SJunchao Zhang     *csrmatH                = akok->csrmatH;
3780e3ece09SJunchao Zhang   }
3793ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
380152b3e56SJunchao Zhang }
381a587d139SMark 
3828c3ff71bSJunchao Zhang /* y = A x */
383d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMult_SeqAIJKokkos(Mat A, Vec xx, Vec yy)
384d71ae5a4SJacob Faibussowitsch {
3858c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos          *aijkok;
386152b3e56SJunchao Zhang   ConstPetscScalarKokkosView xv;
387152b3e56SJunchao Zhang   PetscScalarKokkosView      yv;
3888c3ff71bSJunchao Zhang 
3898c3ff71bSJunchao Zhang   PetscFunctionBegin;
3909566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
3919566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
3929566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(xx, &xv));
3939566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosViewWrite(yy, &yv));
3948c3ff71bSJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
395d326c3f1SJunchao Zhang   PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), "N", 1.0 /*alpha*/, aijkok->csrmat, xv, 0.0 /*beta*/, yv)); /* y = alpha A x + beta y */
3969566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(xx, &xv));
3979566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosViewWrite(yy, &yv));
398076ba34aSJunchao Zhang   /* 2.0*nnz - numRows seems more accurate here but assumes there are no zero-rows. So a little sloppy here. */
3999566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuFlops(2.0 * aijkok->csrmat.nnz()));
4009566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
4013ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4028c3ff71bSJunchao Zhang }
4038c3ff71bSJunchao Zhang 
4048c3ff71bSJunchao Zhang /* y = A^T x */
405d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultTranspose_SeqAIJKokkos(Mat A, Vec xx, Vec yy)
406d71ae5a4SJacob Faibussowitsch {
4078c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos          *aijkok;
408152b3e56SJunchao Zhang   const char                *mode;
409152b3e56SJunchao Zhang   ConstPetscScalarKokkosView xv;
410152b3e56SJunchao Zhang   PetscScalarKokkosView      yv;
4110e3ece09SJunchao Zhang   KokkosCsrMatrix            csrmat;
4128c3ff71bSJunchao Zhang 
4138c3ff71bSJunchao Zhang   PetscFunctionBegin;
4149566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
4159566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
4169566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(xx, &xv));
4179566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosViewWrite(yy, &yv));
418152b3e56SJunchao Zhang   if (A->form_explicit_transpose) {
4199566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &csrmat));
420152b3e56SJunchao Zhang     mode = "N";
421152b3e56SJunchao Zhang   } else {
422076ba34aSJunchao Zhang     aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
4230e3ece09SJunchao Zhang     csrmat = aijkok->csrmat;
424152b3e56SJunchao Zhang     mode   = "T";
425152b3e56SJunchao Zhang   }
426d326c3f1SJunchao Zhang   PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), mode, 1.0 /*alpha*/, csrmat, xv, 0.0 /*beta*/, yv)); /* y = alpha A^T x + beta y */
4279566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(xx, &xv));
4289566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosViewWrite(yy, &yv));
4290e3ece09SJunchao Zhang   PetscCall(PetscLogGpuFlops(2.0 * csrmat.nnz()));
4309566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
4313ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4328c3ff71bSJunchao Zhang }
4338c3ff71bSJunchao Zhang 
4348c3ff71bSJunchao Zhang /* y = A^H x */
435d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultHermitianTranspose_SeqAIJKokkos(Mat A, Vec xx, Vec yy)
436d71ae5a4SJacob Faibussowitsch {
4378c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos          *aijkok;
438152b3e56SJunchao Zhang   const char                *mode;
439152b3e56SJunchao Zhang   ConstPetscScalarKokkosView xv;
440152b3e56SJunchao Zhang   PetscScalarKokkosView      yv;
4410e3ece09SJunchao Zhang   KokkosCsrMatrix            csrmat;
4428c3ff71bSJunchao Zhang 
4438c3ff71bSJunchao Zhang   PetscFunctionBegin;
4449566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
4459566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
4469566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(xx, &xv));
4479566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosViewWrite(yy, &yv));
448152b3e56SJunchao Zhang   if (A->form_explicit_transpose) {
4499566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateHermitian_Private(A, &csrmat));
450152b3e56SJunchao Zhang     mode = "N";
451152b3e56SJunchao Zhang   } else {
452076ba34aSJunchao Zhang     aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
4530e3ece09SJunchao Zhang     csrmat = aijkok->csrmat;
454152b3e56SJunchao Zhang     mode   = "C";
455152b3e56SJunchao Zhang   }
456d326c3f1SJunchao Zhang   PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), mode, 1.0 /*alpha*/, csrmat, xv, 0.0 /*beta*/, yv)); /* y = alpha A^H x + beta y */
4579566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(xx, &xv));
4589566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosViewWrite(yy, &yv));
4590e3ece09SJunchao Zhang   PetscCall(PetscLogGpuFlops(2.0 * csrmat.nnz()));
4609566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
4613ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4628c3ff71bSJunchao Zhang }
4638c3ff71bSJunchao Zhang 
4648c3ff71bSJunchao Zhang /* z = A x + y */
465d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultAdd_SeqAIJKokkos(Mat A, Vec xx, Vec yy, Vec zz)
466d71ae5a4SJacob Faibussowitsch {
4678c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos          *aijkok;
46892896123SJunchao Zhang   ConstPetscScalarKokkosView xv;
469152b3e56SJunchao Zhang   PetscScalarKokkosView      zv;
4708c3ff71bSJunchao Zhang 
4718c3ff71bSJunchao Zhang   PetscFunctionBegin;
4729566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
4739566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
47492896123SJunchao Zhang   if (zz != yy) PetscCall(VecCopy(yy, zz)); // depending on yy's sync flags, zz might get its latest data on host
4759566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(xx, &xv));
47692896123SJunchao Zhang   PetscCall(VecGetKokkosView(zz, &zv)); // do after VecCopy(yy, zz) to get the latest data on device
4778c3ff71bSJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
478d326c3f1SJunchao Zhang   PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), "N", 1.0 /*alpha*/, aijkok->csrmat, xv, 1.0 /*beta*/, zv)); /* z = alpha A x + beta z */
4799566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(xx, &xv));
48092896123SJunchao Zhang   PetscCall(VecRestoreKokkosView(zz, &zv));
4819566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuFlops(2.0 * aijkok->csrmat.nnz()));
4829566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
4833ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
4848c3ff71bSJunchao Zhang }
4858c3ff71bSJunchao Zhang 
4868c3ff71bSJunchao Zhang /* z = A^T x + y */
487d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultTransposeAdd_SeqAIJKokkos(Mat A, Vec xx, Vec yy, Vec zz)
488d71ae5a4SJacob Faibussowitsch {
4898c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos          *aijkok;
490152b3e56SJunchao Zhang   const char                *mode;
49192896123SJunchao Zhang   ConstPetscScalarKokkosView xv;
492152b3e56SJunchao Zhang   PetscScalarKokkosView      zv;
4930e3ece09SJunchao Zhang   KokkosCsrMatrix            csrmat;
4948c3ff71bSJunchao Zhang 
4958c3ff71bSJunchao Zhang   PetscFunctionBegin;
4969566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
4979566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
49892896123SJunchao Zhang   if (zz != yy) PetscCall(VecCopy(yy, zz));
4999566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(xx, &xv));
50092896123SJunchao Zhang   PetscCall(VecGetKokkosView(zz, &zv));
501152b3e56SJunchao Zhang   if (A->form_explicit_transpose) {
5029566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &csrmat));
503152b3e56SJunchao Zhang     mode = "N";
504152b3e56SJunchao Zhang   } else {
505076ba34aSJunchao Zhang     aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
5060e3ece09SJunchao Zhang     csrmat = aijkok->csrmat;
507152b3e56SJunchao Zhang     mode   = "T";
508152b3e56SJunchao Zhang   }
509d326c3f1SJunchao Zhang   PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), mode, 1.0 /*alpha*/, csrmat, xv, 1.0 /*beta*/, zv)); /* z = alpha A^T x + beta z */
5109566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(xx, &xv));
51192896123SJunchao Zhang   PetscCall(VecRestoreKokkosView(zz, &zv));
5120e3ece09SJunchao Zhang   PetscCall(PetscLogGpuFlops(2.0 * csrmat.nnz()));
5139566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
5143ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5158c3ff71bSJunchao Zhang }
5168c3ff71bSJunchao Zhang 
5178c3ff71bSJunchao Zhang /* z = A^H x + y */
518d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJKokkos(Mat A, Vec xx, Vec yy, Vec zz)
519d71ae5a4SJacob Faibussowitsch {
5208c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos          *aijkok;
521152b3e56SJunchao Zhang   const char                *mode;
52292896123SJunchao Zhang   ConstPetscScalarKokkosView xv;
523152b3e56SJunchao Zhang   PetscScalarKokkosView      zv;
5240e3ece09SJunchao Zhang   KokkosCsrMatrix            csrmat;
5258c3ff71bSJunchao Zhang 
5268c3ff71bSJunchao Zhang   PetscFunctionBegin;
5279566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
5289566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
52992896123SJunchao Zhang   if (zz != yy) PetscCall(VecCopy(yy, zz));
5309566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(xx, &xv));
53192896123SJunchao Zhang   PetscCall(VecGetKokkosView(zz, &zv));
532152b3e56SJunchao Zhang   if (A->form_explicit_transpose) {
5339566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateHermitian_Private(A, &csrmat));
534152b3e56SJunchao Zhang     mode = "N";
535152b3e56SJunchao Zhang   } else {
536076ba34aSJunchao Zhang     aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
5370e3ece09SJunchao Zhang     csrmat = aijkok->csrmat;
538152b3e56SJunchao Zhang     mode   = "C";
539152b3e56SJunchao Zhang   }
540d326c3f1SJunchao Zhang   PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), mode, 1.0 /*alpha*/, csrmat, xv, 1.0 /*beta*/, zv)); /* z = alpha A^H x + beta z */
5419566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(xx, &xv));
54292896123SJunchao Zhang   PetscCall(VecRestoreKokkosView(zz, &zv));
5430e3ece09SJunchao Zhang   PetscCall(PetscLogGpuFlops(2.0 * csrmat.nnz()));
5449566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
5453ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
546152b3e56SJunchao Zhang }
547152b3e56SJunchao Zhang 
54866976f2fSJacob Faibussowitsch static PetscErrorCode MatSetOption_SeqAIJKokkos(Mat A, MatOption op, PetscBool flg)
549d71ae5a4SJacob Faibussowitsch {
550152b3e56SJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
551152b3e56SJunchao Zhang 
552152b3e56SJunchao Zhang   PetscFunctionBegin;
553152b3e56SJunchao Zhang   switch (op) {
554152b3e56SJunchao Zhang   case MAT_FORM_EXPLICIT_TRANSPOSE:
555152b3e56SJunchao Zhang     /* need to destroy the transpose matrix if present to prevent from logic errors if flg is set to true later */
5569566063dSJacob Faibussowitsch     if (A->form_explicit_transpose && !flg && aijkok) PetscCall(aijkok->DestroyMatTranspose());
557152b3e56SJunchao Zhang     A->form_explicit_transpose = flg;
558152b3e56SJunchao Zhang     break;
559d71ae5a4SJacob Faibussowitsch   default:
560d71ae5a4SJacob Faibussowitsch     PetscCall(MatSetOption_SeqAIJ(A, op, flg));
561d71ae5a4SJacob Faibussowitsch     break;
562152b3e56SJunchao Zhang   }
5633ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5648c3ff71bSJunchao Zhang }
5658c3ff71bSJunchao Zhang 
566076ba34aSJunchao Zhang /* Depending on reuse, either build a new mat, or use the existing mat */
567d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJKokkos(Mat A, MatType mtype, MatReuse reuse, Mat *newmat)
568d71ae5a4SJacob Faibussowitsch {
569076ba34aSJunchao Zhang   Mat_SeqAIJ *aseq;
5708c3ff71bSJunchao Zhang 
5718c3ff71bSJunchao Zhang   PetscFunctionBegin;
5729566063dSJacob Faibussowitsch   PetscCall(PetscKokkosInitializeCheck());
573076ba34aSJunchao Zhang   if (reuse == MAT_INITIAL_MATRIX) { /* Build a brand new mat */
57451ece73cSJunchao Zhang     PetscCall(MatDuplicate(A, MAT_COPY_VALUES, newmat));
57551ece73cSJunchao Zhang     PetscCall(MatSetType(*newmat, mtype));
5768c3ff71bSJunchao Zhang   } else if (reuse == MAT_REUSE_MATRIX) {                 /* Reuse the mat created before */
5779566063dSJacob Faibussowitsch     PetscCall(MatCopy(A, *newmat, SAME_NONZERO_PATTERN)); /* newmat is already a SeqAIJKokkos */
578076ba34aSJunchao Zhang   } else if (reuse == MAT_INPLACE_MATRIX) {               /* newmat is A */
5795f80ce2aSJacob Faibussowitsch     PetscCheck(A == *newmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "A != *newmat with MAT_INPLACE_MATRIX");
5809566063dSJacob Faibussowitsch     PetscCall(PetscFree(A->defaultvectype));
5819566063dSJacob Faibussowitsch     PetscCall(PetscStrallocpy(VECKOKKOS, &A->defaultvectype)); /* Allocate and copy the string */
5829566063dSJacob Faibussowitsch     PetscCall(PetscObjectChangeTypeName((PetscObject)A, MATSEQAIJKOKKOS));
5839566063dSJacob Faibussowitsch     PetscCall(MatSetOps_SeqAIJKokkos(A));
584076ba34aSJunchao Zhang     aseq = static_cast<Mat_SeqAIJ *>(A->data);
585394ed5ebSJunchao Zhang     if (A->assembled) { /* Copy i, j (but not values) to device for an assembled matrix if not yet */
5865f80ce2aSJacob Faibussowitsch       PetscCheck(!A->spptr, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "Expect NULL (Mat_SeqAIJKokkos*)A->spptr");
587f4747e26SJunchao Zhang       A->spptr = new Mat_SeqAIJKokkos(A->rmap->n, A->cmap->n, aseq, A->nonzerostate, PETSC_FALSE);
5888c3ff71bSJunchao Zhang     }
589076ba34aSJunchao Zhang   }
5903ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
5918c3ff71bSJunchao Zhang }
5928c3ff71bSJunchao Zhang 
593076ba34aSJunchao Zhang /* MatDuplicate always creates a new matrix. MatDuplicate can be called either on an assembled matrix or
594076ba34aSJunchao Zhang    an unassembled matrix, even though MAT_COPY_VALUES is not allowed for unassembled matrix.
595076ba34aSJunchao Zhang  */
596d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDuplicate_SeqAIJKokkos(Mat A, MatDuplicateOption dupOption, Mat *B)
597d71ae5a4SJacob Faibussowitsch {
598076ba34aSJunchao Zhang   Mat_SeqAIJ       *bseq;
599076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr), *bkok;
600076ba34aSJunchao Zhang   Mat               mat;
6018c3ff71bSJunchao Zhang 
6028c3ff71bSJunchao Zhang   PetscFunctionBegin;
603076ba34aSJunchao Zhang   /* Do not copy values on host as A's latest values might be on device. We don't want to do sync blindly */
6049566063dSJacob Faibussowitsch   PetscCall(MatDuplicate_SeqAIJ(A, MAT_DO_NOT_COPY_VALUES, B));
605076ba34aSJunchao Zhang   mat = *B;
606f4747e26SJunchao Zhang   if (A->assembled) {
607076ba34aSJunchao Zhang     bseq = static_cast<Mat_SeqAIJ *>(mat->data);
608f4747e26SJunchao Zhang     bkok = new Mat_SeqAIJKokkos(mat->rmap->n, mat->cmap->n, bseq, mat->nonzerostate, PETSC_FALSE);
609076ba34aSJunchao Zhang     bkok->a_dual.clear_sync_state(); /* Clear B's sync state as it will be decided below */
610076ba34aSJunchao Zhang     /* Now copy values to B if needed */
611076ba34aSJunchao Zhang     if (dupOption == MAT_COPY_VALUES) {
612076ba34aSJunchao Zhang       if (akok->a_dual.need_sync_device()) {
613076ba34aSJunchao Zhang         Kokkos::deep_copy(bkok->a_dual.view_host(), akok->a_dual.view_host());
614076ba34aSJunchao Zhang         bkok->a_dual.modify_host();
615076ba34aSJunchao Zhang       } else { /* If device has the latest data, we only copy data on device */
616076ba34aSJunchao Zhang         Kokkos::deep_copy(bkok->a_dual.view_device(), akok->a_dual.view_device());
617076ba34aSJunchao Zhang         bkok->a_dual.modify_device();
618076ba34aSJunchao Zhang       }
619076ba34aSJunchao Zhang     } else { /* MAT_DO_NOT_COPY_VALUES or MAT_SHARE_NONZERO_PATTERN. B's values should be zeroed */
620076ba34aSJunchao Zhang       /* B's values on host should be already zeroed by MatDuplicate_SeqAIJ() */
621076ba34aSJunchao Zhang       bkok->a_dual.modify_host();
622076ba34aSJunchao Zhang     }
623076ba34aSJunchao Zhang     mat->spptr = bkok;
624076ba34aSJunchao Zhang   }
625076ba34aSJunchao Zhang 
6269566063dSJacob Faibussowitsch   PetscCall(PetscFree(mat->defaultvectype));
6279566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(VECKOKKOS, &mat->defaultvectype)); /* Allocate and copy the string */
6289566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATSEQAIJKOKKOS));
6299566063dSJacob Faibussowitsch   PetscCall(MatSetOps_SeqAIJKokkos(mat));
6303ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
6318c3ff71bSJunchao Zhang }
6328c3ff71bSJunchao Zhang 
633d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTranspose_SeqAIJKokkos(Mat A, MatReuse reuse, Mat *B)
634d71ae5a4SJacob Faibussowitsch {
6350ecb592aSJunchao Zhang   Mat               At;
6360e3ece09SJunchao Zhang   KokkosCsrMatrix   internT;
6370ecb592aSJunchao Zhang   Mat_SeqAIJKokkos *atkok, *bkok;
6380ecb592aSJunchao Zhang 
6390ecb592aSJunchao Zhang   PetscFunctionBegin;
6407fb60732SBarry Smith   if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *B));
6419566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &internT)); /* Generate a transpose internally */
6420ecb592aSJunchao Zhang   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) {
643ff751488SJunchao Zhang     /* Deep copy internT, as we want to isolate the internal transpose */
6440e3ece09SJunchao Zhang     PetscCallCXX(atkok = new Mat_SeqAIJKokkos(KokkosCsrMatrix("csrmat", internT)));
6459566063dSJacob Faibussowitsch     PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PetscObjectComm((PetscObject)A), atkok, &At));
6460ecb592aSJunchao Zhang     if (reuse == MAT_INITIAL_MATRIX) *B = At;
6479566063dSJacob Faibussowitsch     else PetscCall(MatHeaderReplace(A, &At)); /* Replace A with At inplace */
6480ecb592aSJunchao Zhang   } else {                                    /* MAT_REUSE_MATRIX, just need to copy values to B on device */
6490ecb592aSJunchao Zhang     if ((*B)->assembled) {
6500ecb592aSJunchao Zhang       bkok = static_cast<Mat_SeqAIJKokkos *>((*B)->spptr);
6510e3ece09SJunchao Zhang       PetscCallCXX(Kokkos::deep_copy(bkok->a_dual.view_device(), internT.values));
6529566063dSJacob Faibussowitsch       PetscCall(MatSeqAIJKokkosModifyDevice(*B));
6530ecb592aSJunchao Zhang     } else if ((*B)->preallocated) { /* It is ok for B to be only preallocated, as needed in MatTranspose_MPIAIJ */
6540ecb592aSJunchao Zhang       Mat_SeqAIJ             *bseq = static_cast<Mat_SeqAIJ *>((*B)->data);
6550e3ece09SJunchao Zhang       MatScalarKokkosViewHost a_h(bseq->a, internT.nnz()); /* bseq->nz = 0 if unassembled */
6560e3ece09SJunchao Zhang       MatColIdxKokkosViewHost j_h(bseq->j, internT.nnz());
6570e3ece09SJunchao Zhang       PetscCallCXX(Kokkos::deep_copy(a_h, internT.values));
6580e3ece09SJunchao Zhang       PetscCallCXX(Kokkos::deep_copy(j_h, internT.graph.entries));
6590ecb592aSJunchao Zhang     } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "B must be assembled or preallocated");
6600ecb592aSJunchao Zhang   }
6613ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
6620ecb592aSJunchao Zhang }
6630ecb592aSJunchao Zhang 
664d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDestroy_SeqAIJKokkos(Mat A)
665d71ae5a4SJacob Faibussowitsch {
66686a27549SJunchao Zhang   Mat_SeqAIJKokkos *aijkok;
6678c3ff71bSJunchao Zhang 
6688c3ff71bSJunchao Zhang   PetscFunctionBegin;
66986a27549SJunchao Zhang   if (A->factortype == MAT_FACTOR_NONE) {
67086a27549SJunchao Zhang     aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
6718c3ff71bSJunchao Zhang     delete aijkok;
67286a27549SJunchao Zhang   } else {
67386a27549SJunchao Zhang     delete static_cast<Mat_SeqAIJKokkosTriFactors *>(A->spptr);
67486a27549SJunchao Zhang   }
675cbc6b225SStefano Zampini   A->spptr = NULL;
6769566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatFactorGetSolverType_C", NULL));
6779566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetPreallocationCOO_C", NULL));
6789566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetValuesCOO_C", NULL));
67957761e9aSJunchao Zhang #if defined(PETSC_HAVE_HYPRE)
68057761e9aSJunchao Zhang   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatConvert_seqaijkokkos_hypre_C", NULL));
68157761e9aSJunchao Zhang #endif
6829566063dSJacob Faibussowitsch   PetscCall(MatDestroy_SeqAIJ(A));
6833ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
6848c3ff71bSJunchao Zhang }
6858c3ff71bSJunchao Zhang 
6863f3ba80aSJunchao Zhang /*MC
6873f3ba80aSJunchao Zhang    MATSEQAIJKOKKOS - MATAIJKOKKOS = "(seq)aijkokkos" - A matrix type to be used for sparse matrices with Kokkos
6883f3ba80aSJunchao Zhang 
68915229ffcSPierre Jolivet    A matrix type using Kokkos-Kernels CrsMatrix type for portability across different device types
6903f3ba80aSJunchao Zhang 
6912ef1f0ffSBarry Smith    Options Database Key:
69211a5261eSBarry Smith .  -mat_type aijkokkos - sets the matrix type to `MATSEQAIJKOKKOS` during a call to `MatSetFromOptions()`
6933f3ba80aSJunchao Zhang 
6943f3ba80aSJunchao Zhang   Level: beginner
6953f3ba80aSJunchao Zhang 
6961cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreateSeqAIJKokkos()`, `MATMPIAIJKOKKOS`
6973f3ba80aSJunchao Zhang M*/
698d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatCreate_SeqAIJKokkos(Mat A)
699d71ae5a4SJacob Faibussowitsch {
70086a27549SJunchao Zhang   PetscFunctionBegin;
7019566063dSJacob Faibussowitsch   PetscCall(PetscKokkosInitializeCheck());
7029566063dSJacob Faibussowitsch   PetscCall(MatCreate_SeqAIJ(A));
7039566063dSJacob Faibussowitsch   PetscCall(MatConvert_SeqAIJ_SeqAIJKokkos(A, MATSEQAIJKOKKOS, MAT_INPLACE_MATRIX, &A));
7043ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
70586a27549SJunchao Zhang }
70686a27549SJunchao Zhang 
707076ba34aSJunchao Zhang /* Merge A, B into a matrix C. A is put before B. C's size would be A->rmap->n by (A->cmap->n + B->cmap->n) */
708d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJKokkosMergeMats(Mat A, Mat B, MatReuse reuse, Mat *C)
709d71ae5a4SJacob Faibussowitsch {
710076ba34aSJunchao Zhang   Mat_SeqAIJ         *a, *b;
711076ba34aSJunchao Zhang   Mat_SeqAIJKokkos   *akok, *bkok, *ckok;
712076ba34aSJunchao Zhang   MatScalarKokkosView aa, ba, ca;
713076ba34aSJunchao Zhang   MatRowMapKokkosView ai, bi, ci;
714076ba34aSJunchao Zhang   MatColIdxKokkosView aj, bj, cj;
715076ba34aSJunchao Zhang   PetscInt            m, n, nnz, aN;
716a3f881fbSStefano Zampini 
717a3f881fbSStefano Zampini   PetscFunctionBegin;
718076ba34aSJunchao Zhang   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
719076ba34aSJunchao Zhang   PetscValidHeaderSpecific(B, MAT_CLASSID, 2);
7204f572ea9SToby Isaac   PetscAssertPointer(C, 4);
721076ba34aSJunchao Zhang   PetscCheckTypeName(A, MATSEQAIJKOKKOS);
722076ba34aSJunchao Zhang   PetscCheckTypeName(B, MATSEQAIJKOKKOS);
7235f80ce2aSJacob Faibussowitsch   PetscCheck(A->rmap->n == B->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Invalid number or rows %" PetscInt_FMT " != %" PetscInt_FMT, A->rmap->n, B->rmap->n);
7245f80ce2aSJacob Faibussowitsch   PetscCheck(reuse != MAT_INPLACE_MATRIX, PETSC_COMM_SELF, PETSC_ERR_SUP, "MAT_INPLACE_MATRIX not supported");
725076ba34aSJunchao Zhang 
7269566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
7279566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(B));
728076ba34aSJunchao Zhang   a    = static_cast<Mat_SeqAIJ *>(A->data);
729076ba34aSJunchao Zhang   b    = static_cast<Mat_SeqAIJ *>(B->data);
730076ba34aSJunchao Zhang   akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
731076ba34aSJunchao Zhang   bkok = static_cast<Mat_SeqAIJKokkos *>(B->spptr);
732076ba34aSJunchao Zhang   aa   = akok->a_dual.view_device();
733076ba34aSJunchao Zhang   ai   = akok->i_dual.view_device();
734076ba34aSJunchao Zhang   ba   = bkok->a_dual.view_device();
735076ba34aSJunchao Zhang   bi   = bkok->i_dual.view_device();
736076ba34aSJunchao Zhang   m    = A->rmap->n; /* M, N and nnz of C */
737076ba34aSJunchao Zhang   n    = A->cmap->n + B->cmap->n;
738076ba34aSJunchao Zhang   nnz  = a->nz + b->nz;
739076ba34aSJunchao Zhang   aN   = A->cmap->n; /* N of A */
740076ba34aSJunchao Zhang   if (reuse == MAT_INITIAL_MATRIX) {
741076ba34aSJunchao Zhang     aj      = akok->j_dual.view_device();
742076ba34aSJunchao Zhang     bj      = bkok->j_dual.view_device();
743ecd797f4SJunchao Zhang     auto ca = MatScalarKokkosView("a", aa.extent(0) + ba.extent(0));
744ecd797f4SJunchao Zhang     auto ci = MatRowMapKokkosView("i", ai.extent(0));
745ecd797f4SJunchao Zhang     auto cj = MatColIdxKokkosView("j", aj.extent(0) + bj.extent(0));
746076ba34aSJunchao Zhang 
747076ba34aSJunchao Zhang     /* Concatenate A and B in parallel using Kokkos hierarchical parallelism */
7489371c9d4SSatish Balay     Kokkos::parallel_for(
749d326c3f1SJunchao Zhang       Kokkos::TeamPolicy<>(PetscGetKokkosExecutionSpace(), m, Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) {
750076ba34aSJunchao Zhang         PetscInt i       = t.league_rank(); /* row i */
751076ba34aSJunchao Zhang         PetscInt coffset = ai(i) + bi(i), alen = ai(i + 1) - ai(i), blen = bi(i + 1) - bi(i);
752076ba34aSJunchao Zhang 
753076ba34aSJunchao Zhang         Kokkos::single(Kokkos::PerTeam(t), [=]() { /* this side effect only happens once per whole team */
754076ba34aSJunchao Zhang                                                    ci(i) = coffset;
755076ba34aSJunchao Zhang                                                    if (i == m - 1) ci(m) = ai(m) + bi(m);
756076ba34aSJunchao Zhang         });
757076ba34aSJunchao Zhang 
758076ba34aSJunchao Zhang         Kokkos::parallel_for(Kokkos::TeamThreadRange(t, alen + blen), [&](PetscInt k) {
759076ba34aSJunchao Zhang           if (k < alen) {
760076ba34aSJunchao Zhang             ca(coffset + k) = aa(ai(i) + k);
761076ba34aSJunchao Zhang             cj(coffset + k) = aj(ai(i) + k);
762076ba34aSJunchao Zhang           } else {
763076ba34aSJunchao Zhang             ca(coffset + k) = ba(bi(i) + k - alen);
764076ba34aSJunchao Zhang             cj(coffset + k) = bj(bi(i) + k - alen) + aN; /* Entries in B get new column indices in C */
765076ba34aSJunchao Zhang           }
766076ba34aSJunchao Zhang         });
767076ba34aSJunchao Zhang       });
768ecd797f4SJunchao Zhang     PetscCallCXX(ckok = new Mat_SeqAIJKokkos(m, n, nnz, ci, cj, ca));
7699566063dSJacob Faibussowitsch     PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF, ckok, C));
770076ba34aSJunchao Zhang   } else if (reuse == MAT_REUSE_MATRIX) {
771076ba34aSJunchao Zhang     PetscValidHeaderSpecific(*C, MAT_CLASSID, 4);
772076ba34aSJunchao Zhang     PetscCheckTypeName(*C, MATSEQAIJKOKKOS);
773076ba34aSJunchao Zhang     ckok = static_cast<Mat_SeqAIJKokkos *>((*C)->spptr);
774076ba34aSJunchao Zhang     ca   = ckok->a_dual.view_device();
775076ba34aSJunchao Zhang     ci   = ckok->i_dual.view_device();
776076ba34aSJunchao Zhang 
7779371c9d4SSatish Balay     Kokkos::parallel_for(
778d326c3f1SJunchao Zhang       Kokkos::TeamPolicy<>(PetscGetKokkosExecutionSpace(), m, Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) {
779076ba34aSJunchao Zhang         PetscInt i    = t.league_rank(); /* row i */
780076ba34aSJunchao Zhang         PetscInt alen = ai(i + 1) - ai(i), blen = bi(i + 1) - bi(i);
781076ba34aSJunchao Zhang         Kokkos::parallel_for(Kokkos::TeamThreadRange(t, alen + blen), [&](PetscInt k) {
782076ba34aSJunchao Zhang           if (k < alen) ca(ci(i) + k) = aa(ai(i) + k);
783076ba34aSJunchao Zhang           else ca(ci(i) + k) = ba(bi(i) + k - alen);
784076ba34aSJunchao Zhang         });
785076ba34aSJunchao Zhang       });
7869566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosModifyDevice(*C));
787076ba34aSJunchao Zhang   }
7883ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
789076ba34aSJunchao Zhang }
790076ba34aSJunchao Zhang 
791cc1eb50dSBarry Smith static PetscErrorCode MatProductCtxDestroy_SeqAIJKokkos(void **pdata)
792d71ae5a4SJacob Faibussowitsch {
793076ba34aSJunchao Zhang   PetscFunctionBegin;
794cc1eb50dSBarry Smith   delete *reinterpret_cast<MatProductCtx_SeqAIJKokkos **>(pdata);
7953ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
796a3f881fbSStefano Zampini }
797a3f881fbSStefano Zampini 
798d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductNumeric_SeqAIJKokkos_SeqAIJKokkos(Mat C)
799d71ae5a4SJacob Faibussowitsch {
800a3f881fbSStefano Zampini   Mat_Product                *product = C->product;
801a3f881fbSStefano Zampini   Mat                         A, B;
802076ba34aSJunchao Zhang   bool                        transA, transB; /* use bool, since KK needs this type */
803a3f881fbSStefano Zampini   Mat_SeqAIJKokkos           *akok, *bkok, *ckok;
804a3f881fbSStefano Zampini   Mat_SeqAIJ                 *c;
805cc1eb50dSBarry Smith   MatProductCtx_SeqAIJKokkos *pdata;
8060e3ece09SJunchao Zhang   KokkosCsrMatrix             csrmatA, csrmatB;
807a3f881fbSStefano Zampini 
808a3f881fbSStefano Zampini   PetscFunctionBegin;
809a3f881fbSStefano Zampini   MatCheckProduct(C, 1);
8105f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty");
811cc1eb50dSBarry Smith   pdata = static_cast<MatProductCtx_SeqAIJKokkos *>(C->product->data);
812076ba34aSJunchao Zhang 
8130e3ece09SJunchao Zhang   // See if numeric has already been done in symbolic (e.g., user calls MatMatMult(A,B,MAT_INITIAL_MATRIX,..,C)).
8140e3ece09SJunchao Zhang   // If yes, skip the numeric, but reset the flag so that next time when user calls MatMatMult(E,F,MAT_REUSE_MATRIX,..,C),
8150e3ece09SJunchao Zhang   // we still do numeric.
8160e3ece09SJunchao Zhang   if (pdata->reusesym) { // numeric reuses results from symbolic
8170e3ece09SJunchao Zhang     pdata->reusesym = PETSC_FALSE;
8183ba16761SJacob Faibussowitsch     PetscFunctionReturn(PETSC_SUCCESS);
819076ba34aSJunchao Zhang   }
820076ba34aSJunchao Zhang 
821076ba34aSJunchao Zhang   switch (product->type) {
8229371c9d4SSatish Balay   case MATPRODUCT_AB:
8239371c9d4SSatish Balay     transA = false;
8249371c9d4SSatish Balay     transB = false;
8259371c9d4SSatish Balay     break;
8269371c9d4SSatish Balay   case MATPRODUCT_AtB:
8279371c9d4SSatish Balay     transA = true;
8289371c9d4SSatish Balay     transB = false;
8299371c9d4SSatish Balay     break;
8309371c9d4SSatish Balay   case MATPRODUCT_ABt:
8319371c9d4SSatish Balay     transA = false;
8329371c9d4SSatish Balay     transB = true;
8339371c9d4SSatish Balay     break;
834d71ae5a4SJacob Faibussowitsch   default:
835d71ae5a4SJacob Faibussowitsch     SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Unsupported product type %s", MatProductTypes[product->type]);
836076ba34aSJunchao Zhang   }
837076ba34aSJunchao Zhang 
838a3f881fbSStefano Zampini   A = product->A;
839a3f881fbSStefano Zampini   B = product->B;
8409566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
8419566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(B));
842a3f881fbSStefano Zampini   akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
843a3f881fbSStefano Zampini   bkok = static_cast<Mat_SeqAIJKokkos *>(B->spptr);
844a3f881fbSStefano Zampini   ckok = static_cast<Mat_SeqAIJKokkos *>(C->spptr);
845076ba34aSJunchao Zhang 
8465f80ce2aSJacob Faibussowitsch   PetscCheck(ckok, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Device data structure spptr is empty");
847076ba34aSJunchao Zhang 
8480e3ece09SJunchao Zhang   csrmatA = akok->csrmat;
8490e3ece09SJunchao Zhang   csrmatB = bkok->csrmat;
850076ba34aSJunchao Zhang 
851076ba34aSJunchao Zhang   /* TODO: Once KK spgemm implements transpose, we can get rid of the explicit transpose here */
852076ba34aSJunchao Zhang   if (transA) {
8539566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &csrmatA));
854076ba34aSJunchao Zhang     transA = false;
855a3f881fbSStefano Zampini   }
856a3f881fbSStefano Zampini 
857076ba34aSJunchao Zhang   if (transB) {
8589566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(B, &csrmatB));
859076ba34aSJunchao Zhang     transB = false;
860076ba34aSJunchao Zhang   }
8619566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
8620e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(pdata->kh, csrmatA, transA, csrmatB, transB, ckok->csrmat));
8630e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_LT(4, 0, 0)
864866eb059SJunchao Zhang   auto spgemmHandle = pdata->kh.get_spgemm_handle();
865866eb059SJunchao Zhang   if (spgemmHandle->get_sort_option() != 1) PetscCallCXX(sort_crs_matrix(ckok->csrmat)); /* without sort, mat_tests-ex62_14_seqaijkokkos fails */
866e944a159SJunchao Zhang #endif
867866eb059SJunchao Zhang 
8689566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
8699566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosModifyDevice(C));
870a3f881fbSStefano Zampini   /* shorter version of MatAssemblyEnd_SeqAIJ */
871a3f881fbSStefano Zampini   c = (Mat_SeqAIJ *)C->data;
8729566063dSJacob Faibussowitsch   PetscCall(PetscInfo(C, "Matrix size: %" PetscInt_FMT " X %" PetscInt_FMT "; storage space: 0 unneeded,%" PetscInt_FMT " used\n", C->rmap->n, C->cmap->n, c->nz));
8739566063dSJacob Faibussowitsch   PetscCall(PetscInfo(C, "Number of mallocs during MatSetValues() is 0\n"));
8749566063dSJacob Faibussowitsch   PetscCall(PetscInfo(C, "Maximum nonzeros in any row is %" PetscInt_FMT "\n", c->rmax));
875a3f881fbSStefano Zampini   c->reallocs         = 0;
876076ba34aSJunchao Zhang   C->info.mallocs     = 0;
877a3f881fbSStefano Zampini   C->info.nz_unneeded = 0;
878a3f881fbSStefano Zampini   C->assembled = C->was_assembled = PETSC_TRUE;
879a3f881fbSStefano Zampini   C->num_ass++;
8803ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
881a3f881fbSStefano Zampini }
882a3f881fbSStefano Zampini 
883d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSymbolic_SeqAIJKokkos_SeqAIJKokkos(Mat C)
884d71ae5a4SJacob Faibussowitsch {
885076ba34aSJunchao Zhang   Mat_Product                *product = C->product;
886076ba34aSJunchao Zhang   MatProductType              ptype;
887076ba34aSJunchao Zhang   Mat                         A, B;
888076ba34aSJunchao Zhang   bool                        transA, transB;
889076ba34aSJunchao Zhang   Mat_SeqAIJKokkos           *akok, *bkok, *ckok;
890cc1eb50dSBarry Smith   MatProductCtx_SeqAIJKokkos *pdata;
891076ba34aSJunchao Zhang   MPI_Comm                    comm;
8920e3ece09SJunchao Zhang   KokkosCsrMatrix             csrmatA, csrmatB, csrmatC;
893a3f881fbSStefano Zampini 
894a3f881fbSStefano Zampini   PetscFunctionBegin;
895a3f881fbSStefano Zampini   MatCheckProduct(C, 1);
8969566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)C, &comm));
8975f80ce2aSJacob Faibussowitsch   PetscCheck(!product->data, comm, PETSC_ERR_PLIB, "Product data not empty");
898a3f881fbSStefano Zampini   A = product->A;
899a3f881fbSStefano Zampini   B = product->B;
9009566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
9019566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(B));
902a3f881fbSStefano Zampini   akok    = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
903a3f881fbSStefano Zampini   bkok    = static_cast<Mat_SeqAIJKokkos *>(B->spptr);
9040e3ece09SJunchao Zhang   csrmatA = akok->csrmat;
9050e3ece09SJunchao Zhang   csrmatB = bkok->csrmat;
906076ba34aSJunchao Zhang 
907a3f881fbSStefano Zampini   ptype = product->type;
9080e3ece09SJunchao Zhang   // Take advantage of the symmetry if true
9090e3ece09SJunchao Zhang   if (A->symmetric == PETSC_BOOL3_TRUE && ptype == MATPRODUCT_AtB) {
9100e3ece09SJunchao Zhang     ptype                                          = MATPRODUCT_AB;
9110e3ece09SJunchao Zhang     product->symbolic_used_the_fact_A_is_symmetric = PETSC_TRUE;
9120e3ece09SJunchao Zhang   }
9130e3ece09SJunchao Zhang   if (B->symmetric == PETSC_BOOL3_TRUE && ptype == MATPRODUCT_ABt) {
9140e3ece09SJunchao Zhang     ptype                                          = MATPRODUCT_AB;
9150e3ece09SJunchao Zhang     product->symbolic_used_the_fact_B_is_symmetric = PETSC_TRUE;
9160e3ece09SJunchao Zhang   }
9170e3ece09SJunchao Zhang 
918a3f881fbSStefano Zampini   switch (ptype) {
9199371c9d4SSatish Balay   case MATPRODUCT_AB:
9209371c9d4SSatish Balay     transA = false;
9219371c9d4SSatish Balay     transB = false;
9220e6a1e94SMark Adams     PetscCall(MatSetBlockSizesFromMats(C, A, B));
9239371c9d4SSatish Balay     break;
9249371c9d4SSatish Balay   case MATPRODUCT_AtB:
9259371c9d4SSatish Balay     transA = true;
9269371c9d4SSatish Balay     transB = false;
9270e6a1e94SMark Adams     if (A->cmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(C->rmap, A->cmap->bs));
9280e6a1e94SMark Adams     if (B->cmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(C->cmap, B->cmap->bs));
9299371c9d4SSatish Balay     break;
9309371c9d4SSatish Balay   case MATPRODUCT_ABt:
9319371c9d4SSatish Balay     transA = false;
9329371c9d4SSatish Balay     transB = true;
9330e6a1e94SMark Adams     if (A->rmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(C->rmap, A->rmap->bs));
9340e6a1e94SMark Adams     if (B->rmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(C->cmap, B->rmap->bs));
9359371c9d4SSatish Balay     break;
936d71ae5a4SJacob Faibussowitsch   default:
937d71ae5a4SJacob Faibussowitsch     SETERRQ(comm, PETSC_ERR_PLIB, "Unsupported product type %s", MatProductTypes[product->type]);
938a3f881fbSStefano Zampini   }
939cc1eb50dSBarry Smith   PetscCallCXX(product->data = pdata = new MatProductCtx_SeqAIJKokkos());
940076ba34aSJunchao Zhang   pdata->reusesym = product->api_user;
941a3f881fbSStefano Zampini 
942076ba34aSJunchao Zhang   /* TODO: add command line options to select spgemm algorithms */
943866eb059SJunchao Zhang   auto spgemm_alg = KokkosSparse::SPGEMMAlgorithm::SPGEMM_DEFAULT; /* default alg is TPL if enabled, otherwise KK */
944866eb059SJunchao Zhang 
945866eb059SJunchao Zhang   /* CUDA-10.2's spgemm has bugs. We prefer the SpGEMMreuse APIs introduced in cuda-11.4 */
946866eb059SJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE)
947866eb059SJunchao Zhang   #if PETSC_PKG_CUDA_VERSION_LT(11, 4, 0)
948866eb059SJunchao Zhang   spgemm_alg = KokkosSparse::SPGEMMAlgorithm::SPGEMM_KK;
949866eb059SJunchao Zhang   #endif
950866eb059SJunchao Zhang #endif
9510e3ece09SJunchao Zhang   PetscCallCXX(pdata->kh.create_spgemm_handle(spgemm_alg));
952076ba34aSJunchao Zhang 
9539566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
954076ba34aSJunchao Zhang   /* TODO: Get rid of the explicit transpose once KK-spgemm implements the transpose option */
955076ba34aSJunchao Zhang   if (transA) {
9569566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &csrmatA));
957076ba34aSJunchao Zhang     transA = false;
958076ba34aSJunchao Zhang   }
959076ba34aSJunchao Zhang 
960076ba34aSJunchao Zhang   if (transB) {
9619566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(B, &csrmatB));
962076ba34aSJunchao Zhang     transB = false;
963076ba34aSJunchao Zhang   }
964076ba34aSJunchao Zhang 
9650e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_symbolic(pdata->kh, csrmatA, transA, csrmatB, transB, csrmatC));
966076ba34aSJunchao Zhang   /* spgemm_symbolic() only populates C's rowmap, but not C's column indices.
967076ba34aSJunchao Zhang     So we have to do a fake spgemm_numeric() here to get csrmatC.j_d setup, before
968076ba34aSJunchao Zhang     calling new Mat_SeqAIJKokkos().
969076ba34aSJunchao Zhang     TODO: Remove the fake spgemm_numeric() after KK fixed this problem.
970076ba34aSJunchao Zhang   */
9710e3ece09SJunchao Zhang   PetscCallCXX(KokkosSparse::spgemm_numeric(pdata->kh, csrmatA, transA, csrmatB, transB, csrmatC));
9720e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_LT(4, 0, 0)
973866eb059SJunchao Zhang   /* Query if KK outputs a sorted matrix. If not, we need to sort it */
974866eb059SJunchao Zhang   auto spgemmHandle = pdata->kh.get_spgemm_handle();
975866eb059SJunchao Zhang   if (spgemmHandle->get_sort_option() != 1) PetscCallCXX(sort_crs_matrix(csrmatC)); /* sort_option defaults to -1 in KK!*/
976e944a159SJunchao Zhang #endif
9779566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
978076ba34aSJunchao Zhang 
9799566063dSJacob Faibussowitsch   PetscCallCXX(ckok = new Mat_SeqAIJKokkos(csrmatC));
9809566063dSJacob Faibussowitsch   PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(C, ckok));
981cc1eb50dSBarry Smith   C->product->destroy = MatProductCtxDestroy_SeqAIJKokkos;
9823ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
983a3f881fbSStefano Zampini }
984a3f881fbSStefano Zampini 
985a3f881fbSStefano Zampini /* handles sparse matrix matrix ops */
986d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_SeqAIJKokkos(Mat mat)
987d71ae5a4SJacob Faibussowitsch {
988076ba34aSJunchao Zhang   Mat_Product *product = mat->product;
989a3f881fbSStefano Zampini   PetscBool    Biskok = PETSC_FALSE, Ciskok = PETSC_TRUE;
990a3f881fbSStefano Zampini 
991a3f881fbSStefano Zampini   PetscFunctionBegin;
992a3f881fbSStefano Zampini   MatCheckProduct(mat, 1);
9939566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)product->B, MATSEQAIJKOKKOS, &Biskok));
99448a46eb9SPierre Jolivet   if (product->type == MATPRODUCT_ABC) PetscCall(PetscObjectTypeCompare((PetscObject)product->C, MATSEQAIJKOKKOS, &Ciskok));
995a3f881fbSStefano Zampini   if (Biskok && Ciskok) {
996a3f881fbSStefano Zampini     switch (product->type) {
997a3f881fbSStefano Zampini     case MATPRODUCT_AB:
998a3f881fbSStefano Zampini     case MATPRODUCT_AtB:
999d71ae5a4SJacob Faibussowitsch     case MATPRODUCT_ABt:
1000d71ae5a4SJacob Faibussowitsch       mat->ops->productsymbolic = MatProductSymbolic_SeqAIJKokkos_SeqAIJKokkos;
1001d71ae5a4SJacob Faibussowitsch       break;
1002a3f881fbSStefano Zampini     case MATPRODUCT_PtAP:
1003a3f881fbSStefano Zampini     case MATPRODUCT_RARt:
1004d71ae5a4SJacob Faibussowitsch     case MATPRODUCT_ABC:
1005d71ae5a4SJacob Faibussowitsch       mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic;
1006d71ae5a4SJacob Faibussowitsch       break;
1007d71ae5a4SJacob Faibussowitsch     default:
1008d71ae5a4SJacob Faibussowitsch       break;
1009a3f881fbSStefano Zampini     }
1010a3f881fbSStefano Zampini   } else { /* fallback for AIJ */
10119566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_SeqAIJ(mat));
1012a3f881fbSStefano Zampini   }
10133ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1014a3f881fbSStefano Zampini }
1015a587d139SMark 
1016d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatScale_SeqAIJKokkos(Mat A, PetscScalar a)
1017d71ae5a4SJacob Faibussowitsch {
1018f0cf5187SStefano Zampini   Mat_SeqAIJKokkos *aijkok;
1019f0cf5187SStefano Zampini 
1020f0cf5187SStefano Zampini   PetscFunctionBegin;
10219566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
10229566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
1023f0cf5187SStefano Zampini   aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
1024d326c3f1SJunchao Zhang   KokkosBlas::scal(PetscGetKokkosExecutionSpace(), aijkok->a_dual.view_device(), a, aijkok->a_dual.view_device());
10259566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosModifyDevice(A));
10269566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuFlops(aijkok->a_dual.extent(0)));
10279566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
10283ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1029f0cf5187SStefano Zampini }
1030f0cf5187SStefano Zampini 
1031f4747e26SJunchao Zhang // add a to A's diagonal (if A is square) or main diagonal (if A is rectangular)
1032f4747e26SJunchao Zhang static PetscErrorCode MatShift_SeqAIJKokkos(Mat A, PetscScalar a)
1033f4747e26SJunchao Zhang {
1034f4747e26SJunchao Zhang   Mat_SeqAIJ *aijseq = static_cast<Mat_SeqAIJ *>(A->data);
1035f4747e26SJunchao Zhang 
1036f4747e26SJunchao Zhang   PetscFunctionBegin;
1037*07425a8dSBarry Smith   if (A->assembled && aijseq->diagDense) { // no missing diagonals
1038f4747e26SJunchao Zhang     PetscInt n = PetscMin(A->rmap->n, A->cmap->n);
1039f4747e26SJunchao Zhang 
1040f4747e26SJunchao Zhang     PetscCall(PetscLogGpuTimeBegin());
1041f4747e26SJunchao Zhang     PetscCall(MatSeqAIJKokkosSyncDevice(A));
1042f4747e26SJunchao Zhang     const auto  aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
1043f4747e26SJunchao Zhang     const auto &Aa     = aijkok->a_dual.view_device();
1044f4747e26SJunchao Zhang     const auto &Adiag  = aijkok->diag_dual.view_device();
1045d326c3f1SJunchao Zhang     PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, n), KOKKOS_LAMBDA(const PetscInt i) { Aa(Adiag(i)) += a; }));
1046f4747e26SJunchao Zhang     PetscCall(MatSeqAIJKokkosModifyDevice(A));
1047f4747e26SJunchao Zhang     PetscCall(PetscLogGpuFlops(n));
1048f4747e26SJunchao Zhang     PetscCall(PetscLogGpuTimeEnd());
1049f4747e26SJunchao Zhang   } else { // need reassembly, very slow!
1050f4747e26SJunchao Zhang     PetscCall(MatShift_Basic(A, a));
1051f4747e26SJunchao Zhang   }
1052f4747e26SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
1053f4747e26SJunchao Zhang }
1054f4747e26SJunchao Zhang 
1055f4747e26SJunchao Zhang static PetscErrorCode MatDiagonalSet_SeqAIJKokkos(Mat Y, Vec D, InsertMode is)
1056f4747e26SJunchao Zhang {
1057f4747e26SJunchao Zhang   Mat_SeqAIJ *aijseq = static_cast<Mat_SeqAIJ *>(Y->data);
1058f4747e26SJunchao Zhang 
1059f4747e26SJunchao Zhang   PetscFunctionBegin;
1060*07425a8dSBarry Smith   if (Y->assembled && aijseq->diagDense) { // no missing diagonals
1061f4747e26SJunchao Zhang     ConstPetscScalarKokkosView dv;
1062f4747e26SJunchao Zhang     PetscInt                   n, nv;
1063f4747e26SJunchao Zhang 
1064f4747e26SJunchao Zhang     PetscCall(PetscLogGpuTimeBegin());
1065f4747e26SJunchao Zhang     PetscCall(MatSeqAIJKokkosSyncDevice(Y));
1066f4747e26SJunchao Zhang     PetscCall(VecGetKokkosView(D, &dv));
1067f4747e26SJunchao Zhang     PetscCall(VecGetLocalSize(D, &nv));
1068f4747e26SJunchao Zhang     n = PetscMin(Y->rmap->n, Y->cmap->n);
1069f4747e26SJunchao Zhang     PetscCheck(n == nv, PetscObjectComm((PetscObject)Y), PETSC_ERR_ARG_SIZ, "Matrix size and vector size do not match");
1070f4747e26SJunchao Zhang 
1071f4747e26SJunchao Zhang     const auto  aijkok = static_cast<Mat_SeqAIJKokkos *>(Y->spptr);
1072f4747e26SJunchao Zhang     const auto &Aa     = aijkok->a_dual.view_device();
1073f4747e26SJunchao Zhang     const auto &Adiag  = aijkok->diag_dual.view_device();
1074f4747e26SJunchao Zhang     PetscCallCXX(Kokkos::parallel_for(
1075d326c3f1SJunchao Zhang       Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, n), KOKKOS_LAMBDA(const PetscInt i) {
1076f4747e26SJunchao Zhang         if (is == INSERT_VALUES) Aa(Adiag(i)) = dv(i);
1077f4747e26SJunchao Zhang         else Aa(Adiag(i)) += dv(i);
1078f4747e26SJunchao Zhang       }));
1079f4747e26SJunchao Zhang     PetscCall(VecRestoreKokkosView(D, &dv));
1080f4747e26SJunchao Zhang     PetscCall(MatSeqAIJKokkosModifyDevice(Y));
1081f4747e26SJunchao Zhang     PetscCall(PetscLogGpuFlops(n));
1082f4747e26SJunchao Zhang     PetscCall(PetscLogGpuTimeEnd());
1083f4747e26SJunchao Zhang   } else { // need reassembly, very slow!
1084f4747e26SJunchao Zhang     PetscCall(MatDiagonalSet_Default(Y, D, is));
1085f4747e26SJunchao Zhang   }
1086f4747e26SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
1087f4747e26SJunchao Zhang }
1088f4747e26SJunchao Zhang 
1089f4747e26SJunchao Zhang static PetscErrorCode MatDiagonalScale_SeqAIJKokkos(Mat A, Vec ll, Vec rr)
1090f4747e26SJunchao Zhang {
1091f4747e26SJunchao Zhang   Mat_SeqAIJ                *aijseq = static_cast<Mat_SeqAIJ *>(A->data);
1092f4747e26SJunchao Zhang   PetscInt                   m = A->rmap->n, n = A->cmap->n, nz = aijseq->nz;
1093f4747e26SJunchao Zhang   ConstPetscScalarKokkosView lv, rv;
1094f4747e26SJunchao Zhang 
1095f4747e26SJunchao Zhang   PetscFunctionBegin;
1096f4747e26SJunchao Zhang   PetscCall(PetscLogGpuTimeBegin());
1097f4747e26SJunchao Zhang   PetscCall(MatSeqAIJKokkosSyncDevice(A));
1098f4747e26SJunchao Zhang   const auto  aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
1099f4747e26SJunchao Zhang   const auto &Aa     = aijkok->a_dual.view_device();
1100f4747e26SJunchao Zhang   const auto &Ai     = aijkok->i_dual.view_device();
1101f4747e26SJunchao Zhang   const auto &Aj     = aijkok->j_dual.view_device();
1102f4747e26SJunchao Zhang   if (ll) {
1103f4747e26SJunchao Zhang     PetscCall(VecGetLocalSize(ll, &m));
1104f4747e26SJunchao Zhang     PetscCheck(m == A->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector wrong length");
1105f4747e26SJunchao Zhang     PetscCall(VecGetKokkosView(ll, &lv));
1106f4747e26SJunchao Zhang     PetscCallCXX(Kokkos::parallel_for( // for each row
1107d326c3f1SJunchao Zhang       Kokkos::TeamPolicy<>(PetscGetKokkosExecutionSpace(), m, Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) {
1108f4747e26SJunchao Zhang         PetscInt i   = t.league_rank(); // row i
1109f4747e26SJunchao Zhang         PetscInt len = Ai(i + 1) - Ai(i);
1110f4747e26SJunchao Zhang         // scale entries on the row
1111f4747e26SJunchao Zhang         Kokkos::parallel_for(Kokkos::TeamThreadRange(t, len), [&](PetscInt j) { Aa(Ai(i) + j) *= lv(i); });
1112f4747e26SJunchao Zhang       }));
1113f4747e26SJunchao Zhang     PetscCall(VecRestoreKokkosView(ll, &lv));
1114f4747e26SJunchao Zhang     PetscCall(PetscLogGpuFlops(nz));
1115f4747e26SJunchao Zhang   }
1116f4747e26SJunchao Zhang   if (rr) {
1117f4747e26SJunchao Zhang     PetscCall(VecGetLocalSize(rr, &n));
1118f4747e26SJunchao Zhang     PetscCheck(n == A->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vector wrong length");
1119f4747e26SJunchao Zhang     PetscCall(VecGetKokkosView(rr, &rv));
1120f4747e26SJunchao Zhang     PetscCallCXX(Kokkos::parallel_for( // for each nonzero
1121d326c3f1SJunchao Zhang       Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt k) { Aa(k) *= rv(Aj(k)); }));
1122f4747e26SJunchao Zhang     PetscCall(VecRestoreKokkosView(rr, &lv));
1123f4747e26SJunchao Zhang     PetscCall(PetscLogGpuFlops(nz));
1124f4747e26SJunchao Zhang   }
1125f4747e26SJunchao Zhang   PetscCall(MatSeqAIJKokkosModifyDevice(A));
1126f4747e26SJunchao Zhang   PetscCall(PetscLogGpuTimeEnd());
1127f4747e26SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
1128f4747e26SJunchao Zhang }
1129f4747e26SJunchao Zhang 
1130d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatZeroEntries_SeqAIJKokkos(Mat A)
1131d71ae5a4SJacob Faibussowitsch {
1132076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok;
1133a587d139SMark 
1134a587d139SMark   PetscFunctionBegin;
1135076ba34aSJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
11362328674fSJunchao Zhang   if (aijkok) { /* Only zero the device if data is already there */
1137d326c3f1SJunchao Zhang     KokkosBlas::fill(PetscGetKokkosExecutionSpace(), aijkok->a_dual.view_device(), 0.0);
11389566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosModifyDevice(A));
11392328674fSJunchao Zhang   } else { /* Might be preallocated but not assembled */
11409566063dSJacob Faibussowitsch     PetscCall(MatZeroEntries_SeqAIJ(A));
11412328674fSJunchao Zhang   }
11423ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1143a587d139SMark }
1144a587d139SMark 
1145d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetDiagonal_SeqAIJKokkos(Mat A, Vec x)
1146d71ae5a4SJacob Faibussowitsch {
1147f78ce678SMark Adams   Mat_SeqAIJKokkos     *aijkok;
1148f78ce678SMark Adams   PetscInt              n;
1149f78ce678SMark Adams   PetscScalarKokkosView xv;
1150f78ce678SMark Adams 
1151f78ce678SMark Adams   PetscFunctionBegin;
1152f78ce678SMark Adams   PetscCall(VecGetLocalSize(x, &n));
1153f78ce678SMark Adams   PetscCheck(n == A->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming matrix and vector");
1154f78ce678SMark Adams   PetscCheck(A->factortype == MAT_FACTOR_NONE, PETSC_COMM_SELF, PETSC_ERR_SUP, "MatGetDiagonal_SeqAIJKokkos not supported on factored matrices");
1155f78ce678SMark Adams 
1156f78ce678SMark Adams   PetscCall(MatSeqAIJKokkosSyncDevice(A));
1157f78ce678SMark Adams   aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
1158f78ce678SMark Adams 
1159f78ce678SMark Adams   const auto &Aa    = aijkok->a_dual.view_device();
1160f78ce678SMark Adams   const auto &Ai    = aijkok->i_dual.view_device();
1161f78ce678SMark Adams   const auto &Adiag = aijkok->diag_dual.view_device();
1162f78ce678SMark Adams 
1163f78ce678SMark Adams   PetscCall(VecGetKokkosViewWrite(x, &xv));
11649371c9d4SSatish Balay   Kokkos::parallel_for(
1165d326c3f1SJunchao Zhang     Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, n), KOKKOS_LAMBDA(const PetscInt i) {
1166f78ce678SMark Adams       if (Adiag(i) < Ai(i + 1)) xv(i) = Aa(Adiag(i));
1167f78ce678SMark Adams       else xv(i) = 0;
1168f78ce678SMark Adams     });
1169f78ce678SMark Adams   PetscCall(VecRestoreKokkosViewWrite(x, &xv));
11703ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1171f78ce678SMark Adams }
1172f78ce678SMark Adams 
1173db78de30SJunchao Zhang /* Get a Kokkos View from a mat of type MatSeqAIJKokkos */
1174d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJGetKokkosView(Mat A, ConstMatScalarKokkosView *kv)
1175d71ae5a4SJacob Faibussowitsch {
1176db78de30SJunchao Zhang   Mat_SeqAIJKokkos *aijkok;
1177db78de30SJunchao Zhang 
1178db78de30SJunchao Zhang   PetscFunctionBegin;
1179db78de30SJunchao Zhang   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
11804f572ea9SToby Isaac   PetscAssertPointer(kv, 2);
1181db78de30SJunchao Zhang   PetscCheckTypeName(A, MATSEQAIJKOKKOS);
11829566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
1183db78de30SJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
1184076ba34aSJunchao Zhang   *kv    = aijkok->a_dual.view_device();
11853ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1186db78de30SJunchao Zhang }
1187db78de30SJunchao Zhang 
1188d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJRestoreKokkosView(Mat A, ConstMatScalarKokkosView *kv)
1189d71ae5a4SJacob Faibussowitsch {
1190db78de30SJunchao Zhang   PetscFunctionBegin;
1191db78de30SJunchao Zhang   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
11924f572ea9SToby Isaac   PetscAssertPointer(kv, 2);
1193db78de30SJunchao Zhang   PetscCheckTypeName(A, MATSEQAIJKOKKOS);
11943ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1195db78de30SJunchao Zhang }
1196db78de30SJunchao Zhang 
1197d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJGetKokkosView(Mat A, MatScalarKokkosView *kv)
1198d71ae5a4SJacob Faibussowitsch {
1199db78de30SJunchao Zhang   Mat_SeqAIJKokkos *aijkok;
1200db78de30SJunchao Zhang 
1201db78de30SJunchao Zhang   PetscFunctionBegin;
1202db78de30SJunchao Zhang   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
12034f572ea9SToby Isaac   PetscAssertPointer(kv, 2);
1204db78de30SJunchao Zhang   PetscCheckTypeName(A, MATSEQAIJKOKKOS);
12059566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
1206db78de30SJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
1207076ba34aSJunchao Zhang   *kv    = aijkok->a_dual.view_device();
12083ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1209db78de30SJunchao Zhang }
1210db78de30SJunchao Zhang 
1211d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJRestoreKokkosView(Mat A, MatScalarKokkosView *kv)
1212d71ae5a4SJacob Faibussowitsch {
1213db78de30SJunchao Zhang   PetscFunctionBegin;
1214db78de30SJunchao Zhang   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
12154f572ea9SToby Isaac   PetscAssertPointer(kv, 2);
1216db78de30SJunchao Zhang   PetscCheckTypeName(A, MATSEQAIJKOKKOS);
12179566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosModifyDevice(A));
12183ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1219db78de30SJunchao Zhang }
1220db78de30SJunchao Zhang 
1221d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJGetKokkosViewWrite(Mat A, MatScalarKokkosView *kv)
1222d71ae5a4SJacob Faibussowitsch {
1223db78de30SJunchao Zhang   Mat_SeqAIJKokkos *aijkok;
1224db78de30SJunchao Zhang 
1225db78de30SJunchao Zhang   PetscFunctionBegin;
1226db78de30SJunchao Zhang   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
12274f572ea9SToby Isaac   PetscAssertPointer(kv, 2);
1228db78de30SJunchao Zhang   PetscCheckTypeName(A, MATSEQAIJKOKKOS);
1229db78de30SJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
1230076ba34aSJunchao Zhang   *kv    = aijkok->a_dual.view_device();
12313ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1232db78de30SJunchao Zhang }
1233db78de30SJunchao Zhang 
1234d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJRestoreKokkosViewWrite(Mat A, MatScalarKokkosView *kv)
1235d71ae5a4SJacob Faibussowitsch {
1236db78de30SJunchao Zhang   PetscFunctionBegin;
1237db78de30SJunchao Zhang   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
12384f572ea9SToby Isaac   PetscAssertPointer(kv, 2);
1239db78de30SJunchao Zhang   PetscCheckTypeName(A, MATSEQAIJKOKKOS);
12409566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosModifyDevice(A));
12413ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1242db78de30SJunchao Zhang }
1243db78de30SJunchao Zhang 
1244c0c276a7Ssdargavi PetscErrorCode MatCreateSeqAIJKokkosWithKokkosViews(MPI_Comm comm, PetscInt m, PetscInt n, Kokkos::View<PetscInt *> &i_d, Kokkos::View<PetscInt *> &j_d, Kokkos::View<PetscScalar *> &a_d, Mat *A)
1245c0c276a7Ssdargavi {
1246c0c276a7Ssdargavi   Mat_SeqAIJKokkos *akok;
1247c0c276a7Ssdargavi 
1248c0c276a7Ssdargavi   PetscFunctionBegin;
1249ecd797f4SJunchao Zhang   PetscCallCXX(akok = new Mat_SeqAIJKokkos(m, n, j_d.extent(0), i_d, j_d, a_d));
1250c0c276a7Ssdargavi   PetscCall(MatCreate(comm, A));
1251c0c276a7Ssdargavi   PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(*A, akok));
1252c0c276a7Ssdargavi   PetscFunctionReturn(PETSC_SUCCESS);
1253c0c276a7Ssdargavi }
1254c0c276a7Ssdargavi 
1255c17cf699SJunchao Zhang /* Computes Y += alpha X */
1256d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatAXPY_SeqAIJKokkos(Mat Y, PetscScalar alpha, Mat X, MatStructure pattern)
1257d71ae5a4SJacob Faibussowitsch {
1258a587d139SMark   Mat_SeqAIJ              *x = (Mat_SeqAIJ *)X->data, *y = (Mat_SeqAIJ *)Y->data;
1259c17cf699SJunchao Zhang   Mat_SeqAIJKokkos        *xkok, *ykok, *zkok;
1260c17cf699SJunchao Zhang   ConstMatScalarKokkosView Xa;
1261c17cf699SJunchao Zhang   MatScalarKokkosView      Ya;
12624df4a32cSJunchao Zhang   auto                     exec = PetscGetKokkosExecutionSpace();
1263a587d139SMark 
1264a587d139SMark   PetscFunctionBegin;
1265c17cf699SJunchao Zhang   PetscCheckTypeName(Y, MATSEQAIJKOKKOS);
1266c17cf699SJunchao Zhang   PetscCheckTypeName(X, MATSEQAIJKOKKOS);
12679566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(Y));
12689566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(X));
12699566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
1270db78de30SJunchao Zhang 
1271c17cf699SJunchao Zhang   if (pattern != SAME_NONZERO_PATTERN && x->nz == y->nz) {
1272a587d139SMark     PetscBool e;
12739566063dSJacob Faibussowitsch     PetscCall(PetscArraycmp(x->i, y->i, Y->rmap->n + 1, &e));
1274a587d139SMark     if (e) {
12759566063dSJacob Faibussowitsch       PetscCall(PetscArraycmp(x->j, y->j, y->nz, &e));
1276c17cf699SJunchao Zhang       if (e) pattern = SAME_NONZERO_PATTERN;
1277a587d139SMark     }
1278a587d139SMark   }
1279db78de30SJunchao Zhang 
1280c17cf699SJunchao Zhang   /* cusparseDcsrgeam2() computes C = alpha A + beta B. If one knew sparsity pattern of C, one can skip
1281c17cf699SJunchao Zhang     cusparseScsrgeam2_bufferSizeExt() / cusparseXcsrgeam2Nnz(), and directly call cusparseScsrgeam2().
1282c17cf699SJunchao Zhang     If X is SUBSET_NONZERO_PATTERN of Y, we could take advantage of this cusparse feature. However,
1283c17cf699SJunchao Zhang     KokkosSparse::spadd(alpha,A,beta,B,C) has symbolic and numeric phases, MatAXPY does not.
1284c17cf699SJunchao Zhang   */
1285c17cf699SJunchao Zhang   ykok = static_cast<Mat_SeqAIJKokkos *>(Y->spptr);
1286c17cf699SJunchao Zhang   xkok = static_cast<Mat_SeqAIJKokkos *>(X->spptr);
1287c17cf699SJunchao Zhang   Xa   = xkok->a_dual.view_device();
1288c17cf699SJunchao Zhang   Ya   = ykok->a_dual.view_device();
1289c17cf699SJunchao Zhang 
1290c17cf699SJunchao Zhang   if (pattern == SAME_NONZERO_PATTERN) {
1291d326c3f1SJunchao Zhang     KokkosBlas::axpy(exec, alpha, Xa, Ya);
12929566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosModifyDevice(Y));
1293c17cf699SJunchao Zhang   } else if (pattern == SUBSET_NONZERO_PATTERN) {
1294c17cf699SJunchao Zhang     MatRowMapKokkosView Xi = xkok->i_dual.view_device(), Yi = ykok->i_dual.view_device();
1295c17cf699SJunchao Zhang     MatColIdxKokkosView Xj = xkok->j_dual.view_device(), Yj = ykok->j_dual.view_device();
1296c17cf699SJunchao Zhang 
12979371c9d4SSatish Balay     Kokkos::parallel_for(
1298d326c3f1SJunchao Zhang       Kokkos::TeamPolicy<>(exec, Y->rmap->n, 1), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) {
12990e3ece09SJunchao Zhang         PetscInt i = t.league_rank(); // row i
13000e3ece09SJunchao Zhang         Kokkos::single(Kokkos::PerTeam(t), [=]() {
13010e3ece09SJunchao Zhang           // Only one thread works in a team
1302c17cf699SJunchao Zhang           PetscInt p, q = Yi(i);
13030e3ece09SJunchao Zhang           for (p = Xi(i); p < Xi(i + 1); p++) {          // For each nonzero on row i of X,
13040e3ece09SJunchao Zhang             while (Xj(p) != Yj(q) && q < Yi(i + 1)) q++; // find the matching nonzero on row i of Y.
13050e3ece09SJunchao Zhang             if (Xj(p) == Yj(q)) {                        // Found it
1306c17cf699SJunchao Zhang               Ya(q) += alpha * Xa(p);
1307c17cf699SJunchao Zhang               q++;
1308a587d139SMark             } else {
13090e3ece09SJunchao Zhang             // If not found, it indicates the input is wrong (X is not a SUBSET_NONZERO_PATTERN of Y).
13100e3ece09SJunchao Zhang             // Just insert a NaN at the beginning of row i if it is not empty, to make the result wrong.
13110e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_VERSION_GE(3, 7, 0)
13120e3ece09SJunchao Zhang               if (Yi(i) != Yi(i + 1)) Ya(Yi(i)) = Kokkos::ArithTraits<PetscScalar>::nan();
13138b8b16f9SJunchao Zhang #else
13140e3ece09SJunchao Zhang               if (Yi(i) != Yi(i + 1)) Ya(Yi(i)) = Kokkos::Experimental::nan("1");
13158b8b16f9SJunchao Zhang #endif
1316a587d139SMark             }
1317c17cf699SJunchao Zhang           }
1318c17cf699SJunchao Zhang         });
1319c17cf699SJunchao Zhang       });
13209566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosModifyDevice(Y));
13210e3ece09SJunchao Zhang   } else { // different nonzero patterns
1322c17cf699SJunchao Zhang     Mat             Z;
1323c17cf699SJunchao Zhang     KokkosCsrMatrix zcsr;
1324c17cf699SJunchao Zhang     KernelHandle    kh;
13250e3ece09SJunchao Zhang     kh.create_spadd_handle(true); // X, Y are sorted
1326c17cf699SJunchao Zhang     KokkosSparse::spadd_symbolic(&kh, xkok->csrmat, ykok->csrmat, zcsr);
1327c17cf699SJunchao Zhang     KokkosSparse::spadd_numeric(&kh, alpha, xkok->csrmat, (PetscScalar)1.0, ykok->csrmat, zcsr);
1328c17cf699SJunchao Zhang     zkok = new Mat_SeqAIJKokkos(zcsr);
13299566063dSJacob Faibussowitsch     PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF, zkok, &Z));
13309566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(Y, &Z));
1331c17cf699SJunchao Zhang     kh.destroy_spadd_handle();
1332c17cf699SJunchao Zhang   }
13339566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
13340e3ece09SJunchao Zhang   PetscCall(PetscLogGpuFlops(xkok->a_dual.extent(0) * 2)); // Because we scaled X and then added it to Y
13353ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1336a587d139SMark }
1337a587d139SMark 
13382c4ab24aSJunchao Zhang struct MatCOOStruct_SeqAIJKokkos {
13392c4ab24aSJunchao Zhang   PetscCount           n;
13402c4ab24aSJunchao Zhang   PetscCount           Atot;
13412c4ab24aSJunchao Zhang   PetscInt             nz;
13422c4ab24aSJunchao Zhang   PetscCountKokkosView jmap;
13432c4ab24aSJunchao Zhang   PetscCountKokkosView perm;
13442c4ab24aSJunchao Zhang 
13452c4ab24aSJunchao Zhang   MatCOOStruct_SeqAIJKokkos(const MatCOOStruct_SeqAIJ *coo_h)
13462c4ab24aSJunchao Zhang   {
13472c4ab24aSJunchao Zhang     nz   = coo_h->nz;
13482c4ab24aSJunchao Zhang     n    = coo_h->n;
13492c4ab24aSJunchao Zhang     Atot = coo_h->Atot;
13502c4ab24aSJunchao Zhang     jmap = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), PetscCountKokkosViewHost(coo_h->jmap, nz + 1));
13512c4ab24aSJunchao Zhang     perm = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), PetscCountKokkosViewHost(coo_h->perm, Atot));
13522c4ab24aSJunchao Zhang   }
13532c4ab24aSJunchao Zhang };
13542c4ab24aSJunchao Zhang 
135549abdd8aSBarry Smith static PetscErrorCode MatCOOStructDestroy_SeqAIJKokkos(void **data)
13562c4ab24aSJunchao Zhang {
13572c4ab24aSJunchao Zhang   PetscFunctionBegin;
135849abdd8aSBarry Smith   PetscCallCXX(delete static_cast<MatCOOStruct_SeqAIJKokkos *>(*data));
13592c4ab24aSJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
13602c4ab24aSJunchao Zhang }
13612c4ab24aSJunchao Zhang 
1362d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetPreallocationCOO_SeqAIJKokkos(Mat mat, PetscCount coo_n, PetscInt coo_i[], PetscInt coo_j[])
1363d71ae5a4SJacob Faibussowitsch {
136442550becSJunchao Zhang   Mat_SeqAIJKokkos          *akok;
136542550becSJunchao Zhang   Mat_SeqAIJ                *aseq;
136603e76207SPierre Jolivet   PetscContainer             container_h;
13672c4ab24aSJunchao Zhang   MatCOOStruct_SeqAIJ       *coo_h;
13682c4ab24aSJunchao Zhang   MatCOOStruct_SeqAIJKokkos *coo_d;
136942550becSJunchao Zhang 
137042550becSJunchao Zhang   PetscFunctionBegin;
13719566063dSJacob Faibussowitsch   PetscCall(MatSetPreallocationCOO_SeqAIJ(mat, coo_n, coo_i, coo_j));
1372394ed5ebSJunchao Zhang   aseq = static_cast<Mat_SeqAIJ *>(mat->data);
137342550becSJunchao Zhang   akok = static_cast<Mat_SeqAIJKokkos *>(mat->spptr);
1374cbc6b225SStefano Zampini   delete akok;
1375f4747e26SJunchao Zhang   mat->spptr = akok = new Mat_SeqAIJKokkos(mat->rmap->n, mat->cmap->n, aseq, mat->nonzerostate + 1, PETSC_FALSE);
13769566063dSJacob Faibussowitsch   PetscCall(MatZeroEntries_SeqAIJKokkos(mat));
13772c4ab24aSJunchao Zhang 
13782c4ab24aSJunchao Zhang   // Copy the COO struct to device
13792c4ab24aSJunchao Zhang   PetscCall(PetscObjectQuery((PetscObject)mat, "__PETSc_MatCOOStruct_Host", (PetscObject *)&container_h));
13802c4ab24aSJunchao Zhang   PetscCall(PetscContainerGetPointer(container_h, (void **)&coo_h));
13812c4ab24aSJunchao Zhang   PetscCallCXX(coo_d = new MatCOOStruct_SeqAIJKokkos(coo_h));
13822c4ab24aSJunchao Zhang 
13832c4ab24aSJunchao Zhang   // Put the COO struct in a container and then attach that to the matrix
138403e76207SPierre Jolivet   PetscCall(PetscObjectContainerCompose((PetscObject)mat, "__PETSc_MatCOOStruct_Device", coo_d, MatCOOStructDestroy_SeqAIJKokkos));
13853ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
138642550becSJunchao Zhang }
138742550becSJunchao Zhang 
1388d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetValuesCOO_SeqAIJKokkos(Mat A, const PetscScalar v[], InsertMode imode)
1389d71ae5a4SJacob Faibussowitsch {
139042550becSJunchao Zhang   MatScalarKokkosView        Aa;
139142550becSJunchao Zhang   ConstMatScalarKokkosView   kv;
139242550becSJunchao Zhang   PetscMemType               memtype;
13932c4ab24aSJunchao Zhang   PetscContainer             container;
13942c4ab24aSJunchao Zhang   MatCOOStruct_SeqAIJKokkos *coo;
139542550becSJunchao Zhang 
139642550becSJunchao Zhang   PetscFunctionBegin;
13972c4ab24aSJunchao Zhang   PetscCall(PetscObjectQuery((PetscObject)A, "__PETSc_MatCOOStruct_Device", (PetscObject *)&container));
13982c4ab24aSJunchao Zhang   PetscCall(PetscContainerGetPointer(container, (void **)&coo));
13992c4ab24aSJunchao Zhang 
14002c4ab24aSJunchao Zhang   const auto &n    = coo->n;
14012c4ab24aSJunchao Zhang   const auto &Annz = coo->nz;
14022c4ab24aSJunchao Zhang   const auto &jmap = coo->jmap;
14032c4ab24aSJunchao Zhang   const auto &perm = coo->perm;
14042c4ab24aSJunchao Zhang 
14059566063dSJacob Faibussowitsch   PetscCall(PetscGetMemType(v, &memtype));
140642550becSJunchao Zhang   if (PetscMemTypeHost(memtype)) { /* If user gave v[] in host, we might need to copy it to device if any */
14072c4ab24aSJunchao Zhang     kv = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), ConstMatScalarKokkosViewHost(v, n));
140842550becSJunchao Zhang   } else {
14092c4ab24aSJunchao Zhang     kv = ConstMatScalarKokkosView(v, n); /* Directly use v[]'s memory */
141042550becSJunchao Zhang   }
141142550becSJunchao Zhang 
1412c7b718f4SJunchao Zhang   if (imode == INSERT_VALUES) PetscCall(MatSeqAIJGetKokkosViewWrite(A, &Aa)); /* write matrix values */
1413c7b718f4SJunchao Zhang   else PetscCall(MatSeqAIJGetKokkosView(A, &Aa));                             /* read & write matrix values */
141442550becSJunchao Zhang 
141508bb9926SJunchao Zhang   PetscCall(PetscLogGpuTimeBegin());
14169371c9d4SSatish Balay   Kokkos::parallel_for(
1417d326c3f1SJunchao Zhang     Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, Annz), KOKKOS_LAMBDA(const PetscCount i) {
1418c7b718f4SJunchao Zhang       PetscScalar sum = 0.0;
1419c7b718f4SJunchao Zhang       for (PetscCount k = jmap(i); k < jmap(i + 1); k++) sum += kv(perm(k));
1420c7b718f4SJunchao Zhang       Aa(i) = (imode == INSERT_VALUES ? 0.0 : Aa(i)) + sum;
1421c7b718f4SJunchao Zhang     });
142208bb9926SJunchao Zhang   PetscCall(PetscLogGpuTimeEnd());
1423394ed5ebSJunchao Zhang 
14249566063dSJacob Faibussowitsch   if (imode == INSERT_VALUES) PetscCall(MatSeqAIJRestoreKokkosViewWrite(A, &Aa));
14259566063dSJacob Faibussowitsch   else PetscCall(MatSeqAIJRestoreKokkosView(A, &Aa));
14263ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
142742550becSJunchao Zhang }
142842550becSJunchao Zhang 
1429d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetOps_SeqAIJKokkos(Mat A)
1430d71ae5a4SJacob Faibussowitsch {
1431076ba34aSJunchao Zhang   Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data;
1432076ba34aSJunchao Zhang 
14338c3ff71bSJunchao Zhang   PetscFunctionBegin;
1434076ba34aSJunchao Zhang   A->offloadmask = PETSC_OFFLOAD_KOKKOS; /* We do not really use this flag */
14356f3d89d0SStefano Zampini   A->boundtocpu  = PETSC_FALSE;
14366f3d89d0SStefano Zampini 
14378c3ff71bSJunchao Zhang   A->ops->assemblyend               = MatAssemblyEnd_SeqAIJKokkos;
14388c3ff71bSJunchao Zhang   A->ops->destroy                   = MatDestroy_SeqAIJKokkos;
14398c3ff71bSJunchao Zhang   A->ops->duplicate                 = MatDuplicate_SeqAIJKokkos;
1440a587d139SMark   A->ops->axpy                      = MatAXPY_SeqAIJKokkos;
1441f0cf5187SStefano Zampini   A->ops->scale                     = MatScale_SeqAIJKokkos;
1442a587d139SMark   A->ops->zeroentries               = MatZeroEntries_SeqAIJKokkos;
1443076ba34aSJunchao Zhang   A->ops->productsetfromoptions     = MatProductSetFromOptions_SeqAIJKokkos;
14448c3ff71bSJunchao Zhang   A->ops->mult                      = MatMult_SeqAIJKokkos;
14458c3ff71bSJunchao Zhang   A->ops->multadd                   = MatMultAdd_SeqAIJKokkos;
14468c3ff71bSJunchao Zhang   A->ops->multtranspose             = MatMultTranspose_SeqAIJKokkos;
14478c3ff71bSJunchao Zhang   A->ops->multtransposeadd          = MatMultTransposeAdd_SeqAIJKokkos;
14488c3ff71bSJunchao Zhang   A->ops->multhermitiantranspose    = MatMultHermitianTranspose_SeqAIJKokkos;
14498c3ff71bSJunchao Zhang   A->ops->multhermitiantransposeadd = MatMultHermitianTransposeAdd_SeqAIJKokkos;
1450076ba34aSJunchao Zhang   A->ops->productnumeric            = MatProductNumeric_SeqAIJKokkos_SeqAIJKokkos;
14510ecb592aSJunchao Zhang   A->ops->transpose                 = MatTranspose_SeqAIJKokkos;
1452152b3e56SJunchao Zhang   A->ops->setoption                 = MatSetOption_SeqAIJKokkos;
1453f78ce678SMark Adams   A->ops->getdiagonal               = MatGetDiagonal_SeqAIJKokkos;
1454f4747e26SJunchao Zhang   A->ops->shift                     = MatShift_SeqAIJKokkos;
1455f4747e26SJunchao Zhang   A->ops->diagonalset               = MatDiagonalSet_SeqAIJKokkos;
1456f4747e26SJunchao Zhang   A->ops->diagonalscale             = MatDiagonalScale_SeqAIJKokkos;
145703db1824SAlex Lindsay   A->ops->getcurrentmemtype         = MatGetCurrentMemType_SeqAIJKokkos;
1458076ba34aSJunchao Zhang   a->ops->getarray                  = MatSeqAIJGetArray_SeqAIJKokkos;
1459076ba34aSJunchao Zhang   a->ops->restorearray              = MatSeqAIJRestoreArray_SeqAIJKokkos;
1460076ba34aSJunchao Zhang   a->ops->getarrayread              = MatSeqAIJGetArrayRead_SeqAIJKokkos;
1461076ba34aSJunchao Zhang   a->ops->restorearrayread          = MatSeqAIJRestoreArrayRead_SeqAIJKokkos;
1462076ba34aSJunchao Zhang   a->ops->getarraywrite             = MatSeqAIJGetArrayWrite_SeqAIJKokkos;
1463076ba34aSJunchao Zhang   a->ops->restorearraywrite         = MatSeqAIJRestoreArrayWrite_SeqAIJKokkos;
14647ee59b9bSJunchao Zhang   a->ops->getcsrandmemtype          = MatSeqAIJGetCSRAndMemType_SeqAIJKokkos;
146542550becSJunchao Zhang 
14669566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetPreallocationCOO_C", MatSetPreallocationCOO_SeqAIJKokkos));
14679566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetValuesCOO_C", MatSetValuesCOO_SeqAIJKokkos));
146857761e9aSJunchao Zhang #if defined(PETSC_HAVE_HYPRE)
146957761e9aSJunchao Zhang   PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatConvert_seqaijkokkos_hypre_C", MatConvert_AIJ_HYPRE));
147057761e9aSJunchao Zhang #endif
14713ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1472076ba34aSJunchao Zhang }
1473076ba34aSJunchao Zhang 
14749d13fa56SJunchao Zhang /*
14759d13fa56SJunchao Zhang    Extract the (prescribled) diagonal blocks of the matrix and then invert them
14769d13fa56SJunchao Zhang 
14779d13fa56SJunchao Zhang   Input Parameters:
14789d13fa56SJunchao Zhang +  A       - the MATSEQAIJKOKKOS matrix
14799d13fa56SJunchao Zhang .  bs      - block sizes in 'csr' format, i.e., the i-th block has size bs(i+1) - bs(i)
14809d13fa56SJunchao Zhang .  bs2     - square of block sizes in 'csr' format, i.e., the i-th block should be stored at offset bs2(i) in diagVal[]
14819d13fa56SJunchao Zhang .  blkMap  - map row ids to block ids, i.e., row i belongs to the block blkMap(i)
14829d13fa56SJunchao Zhang -  work    - a pre-allocated work buffer (as big as diagVal) for use by this routine
14839d13fa56SJunchao Zhang 
14849d13fa56SJunchao Zhang   Output Parameter:
14859d13fa56SJunchao Zhang .  diagVal - the (pre-allocated) buffer to store the inverted blocks (each block is stored in column-major order)
14869d13fa56SJunchao Zhang */
14879d13fa56SJunchao Zhang PETSC_INTERN PetscErrorCode MatInvertVariableBlockDiagonal_SeqAIJKokkos(Mat A, const PetscIntKokkosView &bs, const PetscIntKokkosView &bs2, const PetscIntKokkosView &blkMap, PetscScalarKokkosView &work, PetscScalarKokkosView &diagVal)
14889d13fa56SJunchao Zhang {
14899d13fa56SJunchao Zhang   Mat_SeqAIJKokkos *akok    = static_cast<Mat_SeqAIJKokkos *>(A->spptr);
14909d13fa56SJunchao Zhang   PetscInt          nblocks = bs.extent(0) - 1;
14919d13fa56SJunchao Zhang 
14929d13fa56SJunchao Zhang   PetscFunctionBegin;
14939d13fa56SJunchao Zhang   PetscCall(MatSeqAIJKokkosSyncDevice(A)); // Since we'll access A's value on device
14949d13fa56SJunchao Zhang 
14959d13fa56SJunchao Zhang   // Pull out the diagonal blocks of the matrix and then invert the blocks
14969d13fa56SJunchao Zhang   auto Aa    = akok->a_dual.view_device();
14979d13fa56SJunchao Zhang   auto Ai    = akok->i_dual.view_device();
14989d13fa56SJunchao Zhang   auto Aj    = akok->j_dual.view_device();
14999d13fa56SJunchao Zhang   auto Adiag = akok->diag_dual.view_device();
15009d13fa56SJunchao Zhang   // TODO: how to tune the team size?
150145402d8aSJunchao Zhang #if defined(KOKKOS_ENABLE_UNIFIED_MEMORY)
15029d13fa56SJunchao Zhang   auto ts = Kokkos::AUTO();
15039d13fa56SJunchao Zhang #else
15049d13fa56SJunchao Zhang   auto ts = 16; // improved performance 30% over Kokkos::AUTO() with CUDA, but failed with "Kokkos::abort: Requested Team Size is too large!" on CPUs
15059d13fa56SJunchao Zhang #endif
15069d13fa56SJunchao Zhang   PetscCallCXX(Kokkos::parallel_for(
1507d326c3f1SJunchao Zhang     Kokkos::TeamPolicy<>(PetscGetKokkosExecutionSpace(), nblocks, ts), KOKKOS_LAMBDA(const KokkosTeamMemberType &teamMember) {
15089d13fa56SJunchao Zhang       const PetscInt bid    = teamMember.league_rank();                                                   // block id
15099d13fa56SJunchao Zhang       const PetscInt rstart = bs(bid);                                                                    // this block starts from this row
15109d13fa56SJunchao Zhang       const PetscInt m      = bs(bid + 1) - bs(bid);                                                      // size of this block
15119d13fa56SJunchao Zhang       const auto    &B      = Kokkos::View<PetscScalar **, Kokkos::LayoutLeft>(&diagVal(bs2(bid)), m, m); // column-major order
15129d13fa56SJunchao Zhang       const auto    &W      = PetscScalarKokkosView(&work(bs2(bid)), m * m);
15139d13fa56SJunchao Zhang 
15149d13fa56SJunchao Zhang       Kokkos::parallel_for(Kokkos::TeamThreadRange(teamMember, m), [=](const PetscInt &r) { // r-th row in B
15159d13fa56SJunchao Zhang         PetscInt i = rstart + r;                                                            // i-th row in A
15169d13fa56SJunchao Zhang 
15179d13fa56SJunchao Zhang         if (Ai(i) <= Adiag(i) && Adiag(i) < Ai(i + 1)) { // if the diagonal exists (common case)
15189d13fa56SJunchao Zhang           PetscInt first = Adiag(i) - r;                 // we start to check nonzeros from here along this row
15199d13fa56SJunchao Zhang 
15209d13fa56SJunchao Zhang           for (PetscInt c = 0; c < m; c++) {                   // walk n steps to see what column indices we will meet
15219d13fa56SJunchao Zhang             if (first + c < Ai(i) || first + c >= Ai(i + 1)) { // this entry (first+c) is out of range of this row, in other words, its value is zero
15229d13fa56SJunchao Zhang               B(r, c) = 0.0;
15239d13fa56SJunchao Zhang             } else if (Aj(first + c) == rstart + c) { // this entry is right on the (rstart+c) column
15249d13fa56SJunchao Zhang               B(r, c) = Aa(first + c);
15259d13fa56SJunchao Zhang             } else { // this entry does not show up in the CSR
15269d13fa56SJunchao Zhang               B(r, c) = 0.0;
15279d13fa56SJunchao Zhang             }
15289d13fa56SJunchao Zhang           }
15299d13fa56SJunchao Zhang         } else { // rare case that the diagonal does not exist
15309d13fa56SJunchao Zhang           const PetscInt begin = Ai(i);
15319d13fa56SJunchao Zhang           const PetscInt end   = Ai(i + 1);
15329d13fa56SJunchao Zhang           for (PetscInt c = 0; c < m; c++) B(r, c) = 0.0;
15339d13fa56SJunchao Zhang           for (PetscInt j = begin; j < end; j++) { // scan the whole row; could use binary search but this is a rare case so we did not.
15349d13fa56SJunchao Zhang             if (rstart <= Aj(j) && Aj(j) < rstart + m) B(r, Aj(j) - rstart) = Aa(j);
15359d13fa56SJunchao Zhang             else if (Aj(j) >= rstart + m) break;
15369d13fa56SJunchao Zhang           }
15379d13fa56SJunchao Zhang         }
15389d13fa56SJunchao Zhang       });
15399d13fa56SJunchao Zhang 
15409d13fa56SJunchao Zhang       // LU-decompose B (w/o pivoting) and then invert B
15419d13fa56SJunchao Zhang       KokkosBatched::TeamLU<KokkosTeamMemberType, KokkosBatched::Algo::LU::Unblocked>::invoke(teamMember, B, 0.0);
15429d13fa56SJunchao Zhang       KokkosBatched::TeamInverseLU<KokkosTeamMemberType, KokkosBatched::Algo::InverseLU::Unblocked>::invoke(teamMember, B, W);
15439d13fa56SJunchao Zhang     }));
15449d13fa56SJunchao Zhang   // PetscLogGpuFlops() is done in the caller PCSetUp_VPBJacobi_Kokkos as we don't want to compute the flops in kernels
15459d13fa56SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
15469d13fa56SJunchao Zhang }
15479d13fa56SJunchao Zhang 
1548d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatSetSeqAIJKokkosWithCSRMatrix(Mat A, Mat_SeqAIJKokkos *akok)
1549d71ae5a4SJacob Faibussowitsch {
1550076ba34aSJunchao Zhang   Mat_SeqAIJ *aseq;
1551076ba34aSJunchao Zhang   PetscInt    i, m, n;
15524df4a32cSJunchao Zhang   auto        exec = PetscGetKokkosExecutionSpace();
1553076ba34aSJunchao Zhang 
1554076ba34aSJunchao Zhang   PetscFunctionBegin;
15555f80ce2aSJacob Faibussowitsch   PetscCheck(!A->spptr, PETSC_COMM_SELF, PETSC_ERR_PLIB, "A->spptr is supposed to be empty");
1556076ba34aSJunchao Zhang 
1557076ba34aSJunchao Zhang   m = akok->nrows();
1558076ba34aSJunchao Zhang   n = akok->ncols();
15599566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(A, m, n, m, n));
15609566063dSJacob Faibussowitsch   PetscCall(MatSetType(A, MATSEQAIJKOKKOS));
1561076ba34aSJunchao Zhang 
1562076ba34aSJunchao Zhang   /* Set up data structures of A as a MATSEQAIJ */
15639566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(A, MAT_SKIP_ALLOCATION, NULL));
156457508eceSPierre Jolivet   aseq = (Mat_SeqAIJ *)A->data;
1565076ba34aSJunchao Zhang 
1566f3d3cd90SZach Atkins   PetscCall(KokkosDualViewSyncHost(akok->i_dual, exec)); /* We always need sync'ed i, j on host */
1567f3d3cd90SZach Atkins   PetscCall(KokkosDualViewSyncHost(akok->j_dual, exec));
1568076ba34aSJunchao Zhang 
1569076ba34aSJunchao Zhang   aseq->i       = akok->i_host_data();
1570076ba34aSJunchao Zhang   aseq->j       = akok->j_host_data();
1571076ba34aSJunchao Zhang   aseq->a       = akok->a_host_data();
1572076ba34aSJunchao Zhang   aseq->nonew   = -1; /*this indicates that inserting a new value in the matrix that generates a new nonzero is an error*/
1573076ba34aSJunchao Zhang   aseq->free_a  = PETSC_FALSE;
1574076ba34aSJunchao Zhang   aseq->free_ij = PETSC_FALSE;
1575076ba34aSJunchao Zhang   aseq->nz      = akok->nnz();
1576076ba34aSJunchao Zhang   aseq->maxnz   = aseq->nz;
1577076ba34aSJunchao Zhang 
15789566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(m, &aseq->imax));
15799566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(m, &aseq->ilen));
1580ad540459SPierre Jolivet   for (i = 0; i < m; i++) aseq->ilen[i] = aseq->imax[i] = aseq->i[i + 1] - aseq->i[i];
1581076ba34aSJunchao Zhang 
1582076ba34aSJunchao Zhang   /* It is critical to set the nonzerostate, as we use it to check if sparsity pattern (hence data) has changed on host in MatAssemblyEnd */
1583076ba34aSJunchao Zhang   akok->nonzerostate = A->nonzerostate;
1584ff751488SJunchao Zhang   A->spptr           = akok; /* Set A->spptr before MatAssembly so that A->spptr won't be allocated again there */
15859566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY));
15869566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY));
15873ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
1588076ba34aSJunchao Zhang }
1589076ba34aSJunchao Zhang 
15900e3ece09SJunchao Zhang PETSC_INTERN PetscErrorCode MatSeqAIJKokkosGetKokkosCsrMatrix(Mat A, KokkosCsrMatrix *csr)
15910e3ece09SJunchao Zhang {
15920e3ece09SJunchao Zhang   PetscFunctionBegin;
15930e3ece09SJunchao Zhang   PetscCall(MatSeqAIJKokkosSyncDevice(A));
15940e3ece09SJunchao Zhang   *csr = static_cast<Mat_SeqAIJKokkos *>(A->spptr)->csrmat;
15950e3ece09SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
15960e3ece09SJunchao Zhang }
15970e3ece09SJunchao Zhang 
15980e3ece09SJunchao Zhang PETSC_INTERN PetscErrorCode MatCreateSeqAIJKokkosWithKokkosCsrMatrix(MPI_Comm comm, KokkosCsrMatrix csr, Mat *A)
15990e3ece09SJunchao Zhang {
16000e3ece09SJunchao Zhang   Mat_SeqAIJKokkos *akok;
16014d86920dSPierre Jolivet 
16020e3ece09SJunchao Zhang   PetscFunctionBegin;
16030e3ece09SJunchao Zhang   PetscCallCXX(akok = new Mat_SeqAIJKokkos(csr));
16040e3ece09SJunchao Zhang   PetscCall(MatCreate(comm, A));
16050e3ece09SJunchao Zhang   PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(*A, akok));
16060e3ece09SJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
16070e3ece09SJunchao Zhang }
16080e3ece09SJunchao Zhang 
1609076ba34aSJunchao Zhang /* Crete a SEQAIJKOKKOS matrix with a Mat_SeqAIJKokkos data structure
1610076ba34aSJunchao Zhang 
1611076ba34aSJunchao Zhang    Note we have names like MatSeqAIJSetPreallocationCSR, so I use capitalized CSR
1612076ba34aSJunchao Zhang  */
1613d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatCreateSeqAIJKokkosWithCSRMatrix(MPI_Comm comm, Mat_SeqAIJKokkos *akok, Mat *A)
1614d71ae5a4SJacob Faibussowitsch {
1615076ba34aSJunchao Zhang   PetscFunctionBegin;
16169566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm, A));
16179566063dSJacob Faibussowitsch   PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(*A, akok));
16183ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
16198c3ff71bSJunchao Zhang }
16208c3ff71bSJunchao Zhang 
1621152b3e56SJunchao Zhang /*@C
162211a5261eSBarry Smith   MatCreateSeqAIJKokkos - Creates a sparse matrix in `MATSEQAIJKOKKOS` (compressed row) format
16238c3ff71bSJunchao Zhang   (the default parallel PETSc format). This matrix will ultimately be handled by
162420f4b53cSBarry Smith   Kokkos for calculations.
16258c3ff71bSJunchao Zhang 
16268c3ff71bSJunchao Zhang   Collective
16278c3ff71bSJunchao Zhang 
16288c3ff71bSJunchao Zhang   Input Parameters:
162911a5261eSBarry Smith + comm - MPI communicator, set to `PETSC_COMM_SELF`
16308c3ff71bSJunchao Zhang . m    - number of rows
16318c3ff71bSJunchao Zhang . n    - number of columns
163220f4b53cSBarry Smith . nz   - number of nonzeros per row (same for all rows), ignored if `nnz` is provided
163320f4b53cSBarry Smith - nnz  - array containing the number of nonzeros in the various rows (possibly different for each row) or `NULL`
16348c3ff71bSJunchao Zhang 
16358c3ff71bSJunchao Zhang   Output Parameter:
16368c3ff71bSJunchao Zhang . A - the matrix
16378c3ff71bSJunchao Zhang 
16382ef1f0ffSBarry Smith   Level: intermediate
16392ef1f0ffSBarry Smith 
16402ef1f0ffSBarry Smith   Notes:
164111a5261eSBarry Smith   It is recommended that one use the `MatCreate()`, `MatSetType()` and/or `MatSetFromOptions()`,
16428c3ff71bSJunchao Zhang   MatXXXXSetPreallocation() paradgm instead of this routine directly.
164311a5261eSBarry Smith   [MatXXXXSetPreallocation() is, for example, `MatSeqAIJSetPreallocation()`]
16448c3ff71bSJunchao Zhang 
164511a5261eSBarry Smith   The AIJ format, also called
16462ef1f0ffSBarry Smith   compressed row storage, is fully compatible with standard Fortran
16478c3ff71bSJunchao Zhang   storage.  That is, the stored row and column indices can begin at
164820f4b53cSBarry Smith   either one (as in Fortran) or zero.
16498c3ff71bSJunchao Zhang 
16502ef1f0ffSBarry Smith   Specify the preallocated storage with either `nz` or `nnz` (not both).
16512ef1f0ffSBarry Smith   Set `nz` = `PETSC_DEFAULT` and `nnz` = `NULL` for PETSc to control dynamic memory
16522ef1f0ffSBarry Smith   allocation.
16538c3ff71bSJunchao Zhang 
1654fe59aa6dSJacob Faibussowitsch .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MatCreateAIJ()`, `MatSetValues()`, `MatSeqAIJSetColumnIndices()`, `MatCreateSeqAIJWithArrays()`
16558c3ff71bSJunchao Zhang @*/
1656d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateSeqAIJKokkos(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt nz, const PetscInt nnz[], Mat *A)
1657d71ae5a4SJacob Faibussowitsch {
16588c3ff71bSJunchao Zhang   PetscFunctionBegin;
16599566063dSJacob Faibussowitsch   PetscCall(PetscKokkosInitializeCheck());
16609566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm, A));
16619566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A, m, n, m, n));
16629566063dSJacob Faibussowitsch   PetscCall(MatSetType(*A, MATSEQAIJKOKKOS));
16639566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(*A, nz, (PetscInt *)nnz));
16643ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
16658c3ff71bSJunchao Zhang }
1666930e68a5SMark Adams 
1667aac854edSJunchao Zhang // After matrix numeric factorization, there are still steps to do before triangular solve can be called.
1668aac854edSJunchao Zhang // For example, for transpose solve, we might need to compute the transpose matrices if the solver does not support it (such as KK, while cusparse does).
1669aac854edSJunchao Zhang // In cusparse, one has to call cusparseSpSV_analysis() with updated triangular matrix values before calling cusparseSpSV_solve().
1670aac854edSJunchao Zhang // Simiarily, in KK sptrsv_symbolic() has to be called before sptrsv_solve(). We put these steps in MatSeqAIJKokkos{Transpose}SolveCheck.
1671aac854edSJunchao Zhang static PetscErrorCode MatSeqAIJKokkosSolveCheck(Mat A)
1672d71ae5a4SJacob Faibussowitsch {
167386a27549SJunchao Zhang   Mat_SeqAIJKokkosTriFactors *factors   = (Mat_SeqAIJKokkosTriFactors *)A->spptr;
1674aac854edSJunchao Zhang   const PetscBool             has_lower = factors->iL_d.extent(0) ? PETSC_TRUE : PETSC_FALSE; // false with Choleksy
1675aac854edSJunchao Zhang   const PetscBool             has_upper = factors->iU_d.extent(0) ? PETSC_TRUE : PETSC_FALSE; // true with LU and Choleksy
167686a27549SJunchao Zhang 
167786a27549SJunchao Zhang   PetscFunctionBegin;
1678aac854edSJunchao Zhang   if (!factors->sptrsv_symbolic_completed) { // If sptrsv_symbolic was not called yet
1679aac854edSJunchao Zhang     if (has_upper) PetscCallCXX(sptrsv_symbolic(&factors->khU, factors->iU_d, factors->jU_d, factors->aU_d));
1680aac854edSJunchao Zhang     if (has_lower) PetscCallCXX(sptrsv_symbolic(&factors->khL, factors->iL_d, factors->jL_d, factors->aL_d));
168186a27549SJunchao Zhang     factors->sptrsv_symbolic_completed = PETSC_TRUE;
168286a27549SJunchao Zhang   }
16833ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
168486a27549SJunchao Zhang }
168586a27549SJunchao Zhang 
1686d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJKokkosTransposeSolveCheck(Mat A)
1687d71ae5a4SJacob Faibussowitsch {
1688aac854edSJunchao Zhang   const PetscInt              n         = A->rmap->n;
168986a27549SJunchao Zhang   Mat_SeqAIJKokkosTriFactors *factors   = (Mat_SeqAIJKokkosTriFactors *)A->spptr;
1690aac854edSJunchao Zhang   const PetscBool             has_lower = factors->iL_d.extent(0) ? PETSC_TRUE : PETSC_FALSE; // false with Choleksy
1691aac854edSJunchao Zhang   const PetscBool             has_upper = factors->iU_d.extent(0) ? PETSC_TRUE : PETSC_FALSE; // true with LU or Choleksy
169286a27549SJunchao Zhang 
169386a27549SJunchao Zhang   PetscFunctionBegin;
1694aac854edSJunchao Zhang   if (!factors->transpose_updated) {
1695aac854edSJunchao Zhang     if (has_upper) {
1696aac854edSJunchao Zhang       if (!factors->iUt_d.extent(0)) {                                 // Allocate Ut on device if not yet
1697aac854edSJunchao Zhang         factors->iUt_d = MatRowMapKokkosView("factors->iUt_d", n + 1); // KK requires this view to be initialized to 0 to call transpose_matrix
16987b8d4ba6SJunchao Zhang         factors->jUt_d = MatColIdxKokkosView(NoInit("factors->jUt_d"), factors->jU_d.extent(0));
16997b8d4ba6SJunchao Zhang         factors->aUt_d = MatScalarKokkosView(NoInit("factors->aUt_d"), factors->aU_d.extent(0));
1700aac854edSJunchao Zhang       }
170186a27549SJunchao Zhang 
1702aac854edSJunchao Zhang       if (factors->iU_h.extent(0)) { // If U is on host (factorization was done on host), we also compute the transpose on host
1703aac854edSJunchao Zhang         if (!factors->U) {
1704aac854edSJunchao Zhang           Mat_SeqAIJ *seq;
170586a27549SJunchao Zhang 
1706aac854edSJunchao Zhang           PetscCall(MatCreateSeqAIJWithArrays(PETSC_COMM_SELF, n, n, factors->iU_h.data(), factors->jU_h.data(), factors->aU_h.data(), &factors->U));
1707aac854edSJunchao Zhang           PetscCall(MatTranspose(factors->U, MAT_INITIAL_MATRIX, &factors->Ut));
170886a27549SJunchao Zhang 
1709aac854edSJunchao Zhang           seq            = static_cast<Mat_SeqAIJ *>(factors->Ut->data);
1710aac854edSJunchao Zhang           factors->iUt_h = MatRowMapKokkosViewHost(seq->i, n + 1);
1711aac854edSJunchao Zhang           factors->jUt_h = MatColIdxKokkosViewHost(seq->j, seq->nz);
1712aac854edSJunchao Zhang           factors->aUt_h = MatScalarKokkosViewHost(seq->a, seq->nz);
1713aac854edSJunchao Zhang         } else {
1714aac854edSJunchao Zhang           PetscCall(MatTranspose(factors->U, MAT_REUSE_MATRIX, &factors->Ut)); // Matrix Ut' data is aliased with {i, j, a}Ut_h
1715aac854edSJunchao Zhang         }
1716aac854edSJunchao Zhang         // Copy Ut from host to device
1717aac854edSJunchao Zhang         PetscCallCXX(Kokkos::deep_copy(factors->iUt_d, factors->iUt_h));
1718aac854edSJunchao Zhang         PetscCallCXX(Kokkos::deep_copy(factors->jUt_d, factors->jUt_h));
1719aac854edSJunchao Zhang         PetscCallCXX(Kokkos::deep_copy(factors->aUt_d, factors->aUt_h));
1720aac854edSJunchao Zhang       } else { // If U was computed on device, we also compute the transpose there
1721aac854edSJunchao Zhang         // TODO: KK transpose_matrix() does not sort column indices, however cusparse requires sorted indices. We have to sort the indices, until KK provides finer control options.
1722aac854edSJunchao Zhang         PetscCallCXX(transpose_matrix<ConstMatRowMapKokkosView, ConstMatColIdxKokkosView, ConstMatScalarKokkosView, MatRowMapKokkosView, MatColIdxKokkosView, MatScalarKokkosView, MatRowMapKokkosView, DefaultExecutionSpace>(n, n, factors->iU_d,
1723aac854edSJunchao Zhang                                                                                                                                                                                                                                factors->jU_d, factors->aU_d,
1724aac854edSJunchao Zhang                                                                                                                                                                                                                                factors->iUt_d, factors->jUt_d,
1725aac854edSJunchao Zhang                                                                                                                                                                                                                                factors->aUt_d));
1726aac854edSJunchao Zhang         PetscCallCXX(sort_crs_matrix<DefaultExecutionSpace, MatRowMapKokkosView, MatColIdxKokkosView, MatScalarKokkosView>(factors->iUt_d, factors->jUt_d, factors->aUt_d));
1727aac854edSJunchao Zhang       }
1728aac854edSJunchao Zhang       PetscCallCXX(sptrsv_symbolic(&factors->khUt, factors->iUt_d, factors->jUt_d, factors->aUt_d));
1729aac854edSJunchao Zhang     }
1730aac854edSJunchao Zhang 
1731aac854edSJunchao Zhang     // do the same for L with LU
1732aac854edSJunchao Zhang     if (has_lower) {
1733aac854edSJunchao Zhang       if (!factors->iLt_d.extent(0)) {                                 // Allocate Lt on device if not yet
1734aac854edSJunchao Zhang         factors->iLt_d = MatRowMapKokkosView("factors->iLt_d", n + 1); // KK requires this view to be initialized to 0 to call transpose_matrix
1735aac854edSJunchao Zhang         factors->jLt_d = MatColIdxKokkosView(NoInit("factors->jLt_d"), factors->jL_d.extent(0));
1736aac854edSJunchao Zhang         factors->aLt_d = MatScalarKokkosView(NoInit("factors->aLt_d"), factors->aL_d.extent(0));
1737aac854edSJunchao Zhang       }
1738aac854edSJunchao Zhang 
1739aac854edSJunchao Zhang       if (factors->iL_h.extent(0)) { // If L is on host, we also compute the transpose on host
1740aac854edSJunchao Zhang         if (!factors->L) {
1741aac854edSJunchao Zhang           Mat_SeqAIJ *seq;
1742aac854edSJunchao Zhang 
1743aac854edSJunchao Zhang           PetscCall(MatCreateSeqAIJWithArrays(PETSC_COMM_SELF, n, n, factors->iL_h.data(), factors->jL_h.data(), factors->aL_h.data(), &factors->L));
1744aac854edSJunchao Zhang           PetscCall(MatTranspose(factors->L, MAT_INITIAL_MATRIX, &factors->Lt));
1745aac854edSJunchao Zhang 
1746aac854edSJunchao Zhang           seq            = static_cast<Mat_SeqAIJ *>(factors->Lt->data);
1747aac854edSJunchao Zhang           factors->iLt_h = MatRowMapKokkosViewHost(seq->i, n + 1);
1748aac854edSJunchao Zhang           factors->jLt_h = MatColIdxKokkosViewHost(seq->j, seq->nz);
1749aac854edSJunchao Zhang           factors->aLt_h = MatScalarKokkosViewHost(seq->a, seq->nz);
1750aac854edSJunchao Zhang         } else {
1751aac854edSJunchao Zhang           PetscCall(MatTranspose(factors->L, MAT_REUSE_MATRIX, &factors->Lt)); // Matrix Lt' data is aliased with {i, j, a}Lt_h
1752aac854edSJunchao Zhang         }
1753aac854edSJunchao Zhang         // Copy Lt from host to device
1754aac854edSJunchao Zhang         PetscCallCXX(Kokkos::deep_copy(factors->iLt_d, factors->iLt_h));
1755aac854edSJunchao Zhang         PetscCallCXX(Kokkos::deep_copy(factors->jLt_d, factors->jLt_h));
1756aac854edSJunchao Zhang         PetscCallCXX(Kokkos::deep_copy(factors->aLt_d, factors->aLt_h));
1757aac854edSJunchao Zhang       } else { // If L was computed on device, we also compute the transpose there
1758aac854edSJunchao Zhang         // TODO: KK transpose_matrix() does not sort column indices, however cusparse requires sorted indices. We have to sort the indices, until KK provides finer control options.
1759aac854edSJunchao Zhang         PetscCallCXX(transpose_matrix<ConstMatRowMapKokkosView, ConstMatColIdxKokkosView, ConstMatScalarKokkosView, MatRowMapKokkosView, MatColIdxKokkosView, MatScalarKokkosView, MatRowMapKokkosView, DefaultExecutionSpace>(n, n, factors->iL_d,
1760aac854edSJunchao Zhang                                                                                                                                                                                                                                factors->jL_d, factors->aL_d,
1761aac854edSJunchao Zhang                                                                                                                                                                                                                                factors->iLt_d, factors->jLt_d,
1762aac854edSJunchao Zhang                                                                                                                                                                                                                                factors->aLt_d));
1763aac854edSJunchao Zhang         PetscCallCXX(sort_crs_matrix<DefaultExecutionSpace, MatRowMapKokkosView, MatColIdxKokkosView, MatScalarKokkosView>(factors->iLt_d, factors->jLt_d, factors->aLt_d));
1764aac854edSJunchao Zhang       }
1765aac854edSJunchao Zhang       PetscCallCXX(sptrsv_symbolic(&factors->khLt, factors->iLt_d, factors->jLt_d, factors->aLt_d));
1766aac854edSJunchao Zhang     }
1767aac854edSJunchao Zhang 
176886a27549SJunchao Zhang     factors->transpose_updated = PETSC_TRUE;
176986a27549SJunchao Zhang   }
17703ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
177186a27549SJunchao Zhang }
177286a27549SJunchao Zhang 
1773aac854edSJunchao Zhang // Solve Ax = b, with RAR = U^T D U, where R is the row (and col) permutation matrix on A.
1774aac854edSJunchao Zhang // R is represented by rowperm in factors. If R is identity (i.e, no reordering), then rowperm is empty.
1775aac854edSJunchao Zhang static PetscErrorCode MatSolve_SeqAIJKokkos_Cholesky(Mat A, Vec bb, Vec xx)
1776d71ae5a4SJacob Faibussowitsch {
1777aac854edSJunchao Zhang   auto                        exec    = PetscGetKokkosExecutionSpace();
177886a27549SJunchao Zhang   Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)A->spptr;
1779aac854edSJunchao Zhang   PetscInt                    m       = A->rmap->n;
1780aac854edSJunchao Zhang   PetscScalarKokkosView       D       = factors->D_d;
1781aac854edSJunchao Zhang   PetscScalarKokkosView       X, Y, B; // alias
1782aac854edSJunchao Zhang   ConstPetscScalarKokkosView  b;
1783aac854edSJunchao Zhang   PetscScalarKokkosView       x;
1784aac854edSJunchao Zhang   PetscIntKokkosView         &rowperm  = factors->rowperm;
1785aac854edSJunchao Zhang   PetscBool                   identity = rowperm.extent(0) ? PETSC_FALSE : PETSC_TRUE;
178686a27549SJunchao Zhang 
178786a27549SJunchao Zhang   PetscFunctionBegin;
17889566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
1789aac854edSJunchao Zhang   PetscCall(MatSeqAIJKokkosSolveCheck(A));          // for UX = T
1790aac854edSJunchao Zhang   PetscCall(MatSeqAIJKokkosTransposeSolveCheck(A)); // for U^T Y = B
1791aac854edSJunchao Zhang   PetscCall(VecGetKokkosView(bb, &b));
1792aac854edSJunchao Zhang   PetscCall(VecGetKokkosViewWrite(xx, &x));
1793aac854edSJunchao Zhang 
1794aac854edSJunchao Zhang   // Solve U^T Y = B
1795aac854edSJunchao Zhang   if (identity) { // Reorder b with the row permutation
1796aac854edSJunchao Zhang     B = PetscScalarKokkosView(const_cast<PetscScalar *>(b.data()), b.extent(0));
1797aac854edSJunchao Zhang     Y = factors->workVector;
1798aac854edSJunchao Zhang   } else {
1799aac854edSJunchao Zhang     B = factors->workVector;
1800aac854edSJunchao Zhang     PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { B(i) = b(rowperm(i)); }));
1801aac854edSJunchao Zhang     Y = x;
1802aac854edSJunchao Zhang   }
1803aac854edSJunchao Zhang   PetscCallCXX(sptrsv_solve(exec, &factors->khUt, factors->iUt_d, factors->jUt_d, factors->aUt_d, B, Y));
1804aac854edSJunchao Zhang 
1805aac854edSJunchao Zhang   // Solve diag(D) Y' = Y.
1806aac854edSJunchao Zhang   // Actually just do Y' = Y*D since D is already inverted in MatCholeskyFactorNumeric_SeqAIJ(). It is basically a vector element-wise multiplication.
1807aac854edSJunchao Zhang   PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { Y(i) = Y(i) * D(i); }));
1808aac854edSJunchao Zhang 
1809aac854edSJunchao Zhang   // Solve UX = Y
1810aac854edSJunchao Zhang   if (identity) {
1811aac854edSJunchao Zhang     X = x;
1812aac854edSJunchao Zhang   } else {
1813aac854edSJunchao Zhang     X = factors->workVector; // B is not needed anymore
1814aac854edSJunchao Zhang   }
1815aac854edSJunchao Zhang   PetscCallCXX(sptrsv_solve(exec, &factors->khU, factors->iU_d, factors->jU_d, factors->aU_d, Y, X));
1816aac854edSJunchao Zhang 
1817aac854edSJunchao Zhang   // Reorder X with the inverse column (row) permutation
18183a7d0413SPierre Jolivet   if (!identity) PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { x(rowperm(i)) = X(i); }));
1819aac854edSJunchao Zhang 
1820aac854edSJunchao Zhang   PetscCall(VecRestoreKokkosView(bb, &b));
1821aac854edSJunchao Zhang   PetscCall(VecRestoreKokkosViewWrite(xx, &x));
18229566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
18233ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
182486a27549SJunchao Zhang }
182586a27549SJunchao Zhang 
1826aac854edSJunchao Zhang // Solve Ax = b, with RAC = LU, where R and C are row and col permutation matrices on A respectively.
1827aac854edSJunchao Zhang // R and C are represented by rowperm and colperm in factors.
1828aac854edSJunchao Zhang // If R or C is identity (i.e, no reordering), then rowperm or colperm is empty.
1829aac854edSJunchao Zhang static PetscErrorCode MatSolve_SeqAIJKokkos_LU(Mat A, Vec bb, Vec xx)
1830d71ae5a4SJacob Faibussowitsch {
1831aac854edSJunchao Zhang   auto                        exec    = PetscGetKokkosExecutionSpace();
183286a27549SJunchao Zhang   Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)A->spptr;
1833aac854edSJunchao Zhang   PetscInt                    m       = A->rmap->n;
1834aac854edSJunchao Zhang   PetscScalarKokkosView       X, Y, B; // alias
1835aac854edSJunchao Zhang   ConstPetscScalarKokkosView  b;
1836aac854edSJunchao Zhang   PetscScalarKokkosView       x;
1837aac854edSJunchao Zhang   PetscIntKokkosView         &rowperm      = factors->rowperm;
1838aac854edSJunchao Zhang   PetscIntKokkosView         &colperm      = factors->colperm;
1839aac854edSJunchao Zhang   PetscBool                   row_identity = rowperm.extent(0) ? PETSC_FALSE : PETSC_TRUE;
1840aac854edSJunchao Zhang   PetscBool                   col_identity = colperm.extent(0) ? PETSC_FALSE : PETSC_TRUE;
184186a27549SJunchao Zhang 
184286a27549SJunchao Zhang   PetscFunctionBegin;
18439566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
1844aac854edSJunchao Zhang   PetscCall(MatSeqAIJKokkosSolveCheck(A));
1845aac854edSJunchao Zhang   PetscCall(VecGetKokkosView(bb, &b));
1846aac854edSJunchao Zhang   PetscCall(VecGetKokkosViewWrite(xx, &x));
184786a27549SJunchao Zhang 
1848aac854edSJunchao Zhang   // Solve L Y = B (i.e., L (U C^- x) = R b).  R b indicates applying the row permutation on b.
1849aac854edSJunchao Zhang   if (row_identity) {
1850aac854edSJunchao Zhang     B = PetscScalarKokkosView(const_cast<PetscScalar *>(b.data()), b.extent(0));
1851aac854edSJunchao Zhang     Y = factors->workVector;
1852aac854edSJunchao Zhang   } else {
1853aac854edSJunchao Zhang     B = factors->workVector;
1854aac854edSJunchao Zhang     PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { B(i) = b(rowperm(i)); }));
1855aac854edSJunchao Zhang     Y = x;
1856aac854edSJunchao Zhang   }
1857aac854edSJunchao Zhang   PetscCallCXX(sptrsv_solve(exec, &factors->khL, factors->iL_d, factors->jL_d, factors->aL_d, B, Y));
1858aac854edSJunchao Zhang 
1859aac854edSJunchao Zhang   // Solve U C^- x = Y
1860aac854edSJunchao Zhang   if (col_identity) {
1861aac854edSJunchao Zhang     X = x;
1862aac854edSJunchao Zhang   } else {
1863aac854edSJunchao Zhang     X = factors->workVector;
1864aac854edSJunchao Zhang   }
1865aac854edSJunchao Zhang   PetscCallCXX(sptrsv_solve(exec, &factors->khU, factors->iU_d, factors->jU_d, factors->aU_d, Y, X));
1866aac854edSJunchao Zhang 
1867aac854edSJunchao Zhang   // x = C X; Reorder X with the inverse col permutation
18683a7d0413SPierre Jolivet   if (!col_identity) PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { x(colperm(i)) = X(i); }));
1869aac854edSJunchao Zhang 
1870aac854edSJunchao Zhang   PetscCall(VecRestoreKokkosView(bb, &b));
1871aac854edSJunchao Zhang   PetscCall(VecRestoreKokkosViewWrite(xx, &x));
18729566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
18733ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
187486a27549SJunchao Zhang }
187586a27549SJunchao Zhang 
1876aac854edSJunchao Zhang // Solve A^T x = b, with RAC = LU, where R and C are row and col permutation matrices on A respectively.
1877aac854edSJunchao Zhang // R and C are represented by rowperm and colperm in factors.
1878aac854edSJunchao Zhang // If R or C is identity (i.e, no reordering), then rowperm or colperm is empty.
1879aac854edSJunchao Zhang // A = R^-1 L U C^-1, so A^T = C^-T U^T L^T R^-T. But since C^- = C^T, R^- = R^T, we have A^T = C U^T L^T R.
1880aac854edSJunchao Zhang static PetscErrorCode MatSolveTranspose_SeqAIJKokkos_LU(Mat A, Vec bb, Vec xx)
1881aac854edSJunchao Zhang {
1882aac854edSJunchao Zhang   auto                        exec    = PetscGetKokkosExecutionSpace();
1883aac854edSJunchao Zhang   Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)A->spptr;
1884aac854edSJunchao Zhang   PetscInt                    m       = A->rmap->n;
1885aac854edSJunchao Zhang   PetscScalarKokkosView       X, Y, B; // alias
1886aac854edSJunchao Zhang   ConstPetscScalarKokkosView  b;
1887aac854edSJunchao Zhang   PetscScalarKokkosView       x;
1888aac854edSJunchao Zhang   PetscIntKokkosView         &rowperm      = factors->rowperm;
1889aac854edSJunchao Zhang   PetscIntKokkosView         &colperm      = factors->colperm;
1890aac854edSJunchao Zhang   PetscBool                   row_identity = rowperm.extent(0) ? PETSC_FALSE : PETSC_TRUE;
1891aac854edSJunchao Zhang   PetscBool                   col_identity = colperm.extent(0) ? PETSC_FALSE : PETSC_TRUE;
1892aac854edSJunchao Zhang 
1893aac854edSJunchao Zhang   PetscFunctionBegin;
1894aac854edSJunchao Zhang   PetscCall(PetscLogGpuTimeBegin());
1895aac854edSJunchao Zhang   PetscCall(MatSeqAIJKokkosTransposeSolveCheck(A)); // Update L^T, U^T if needed, and do sptrsv symbolic for L^T, U^T
1896aac854edSJunchao Zhang   PetscCall(VecGetKokkosView(bb, &b));
1897aac854edSJunchao Zhang   PetscCall(VecGetKokkosViewWrite(xx, &x));
1898aac854edSJunchao Zhang 
1899aac854edSJunchao Zhang   // Solve U^T Y = B (i.e., U^T (L^T R x) = C^- b).  Note C^- b = C^T b, which means applying the column permutation on b.
1900aac854edSJunchao Zhang   if (col_identity) { // Reorder b with the col permutation
1901aac854edSJunchao Zhang     B = PetscScalarKokkosView(const_cast<PetscScalar *>(b.data()), b.extent(0));
1902aac854edSJunchao Zhang     Y = factors->workVector;
1903aac854edSJunchao Zhang   } else {
1904aac854edSJunchao Zhang     B = factors->workVector;
1905aac854edSJunchao Zhang     PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { B(i) = b(colperm(i)); }));
1906aac854edSJunchao Zhang     Y = x;
1907aac854edSJunchao Zhang   }
1908aac854edSJunchao Zhang   PetscCallCXX(sptrsv_solve(exec, &factors->khUt, factors->iUt_d, factors->jUt_d, factors->aUt_d, B, Y));
1909aac854edSJunchao Zhang 
1910aac854edSJunchao Zhang   // Solve L^T X = Y
1911aac854edSJunchao Zhang   if (row_identity) {
1912aac854edSJunchao Zhang     X = x;
1913aac854edSJunchao Zhang   } else {
1914aac854edSJunchao Zhang     X = factors->workVector;
1915aac854edSJunchao Zhang   }
1916aac854edSJunchao Zhang   PetscCallCXX(sptrsv_solve(exec, &factors->khLt, factors->iLt_d, factors->jLt_d, factors->aLt_d, Y, X));
1917aac854edSJunchao Zhang 
1918aac854edSJunchao Zhang   // x = R^- X = R^T X; Reorder X with the inverse row permutation
19193a7d0413SPierre Jolivet   if (!row_identity) PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { x(rowperm(i)) = X(i); }));
1920aac854edSJunchao Zhang 
1921aac854edSJunchao Zhang   PetscCall(VecRestoreKokkosView(bb, &b));
1922aac854edSJunchao Zhang   PetscCall(VecRestoreKokkosViewWrite(xx, &x));
1923aac854edSJunchao Zhang   PetscCall(PetscLogGpuTimeEnd());
1924aac854edSJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
1925aac854edSJunchao Zhang }
1926aac854edSJunchao Zhang 
1927aac854edSJunchao Zhang static PetscErrorCode MatLUFactorNumeric_SeqAIJKokkos(Mat B, Mat A, const MatFactorInfo *info)
1928aac854edSJunchao Zhang {
1929aac854edSJunchao Zhang   PetscFunctionBegin;
1930aac854edSJunchao Zhang   PetscCall(MatSeqAIJKokkosSyncHost(A));
1931aac854edSJunchao Zhang   PetscCall(MatLUFactorNumeric_SeqAIJ(B, A, info));
1932aac854edSJunchao Zhang 
1933aac854edSJunchao Zhang   if (!info->solveonhost) { // if solve on host, then we don't need to copy L, U to device
1934aac854edSJunchao Zhang     Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)B->spptr;
1935aac854edSJunchao Zhang     Mat_SeqAIJ                 *b       = static_cast<Mat_SeqAIJ *>(B->data);
1936aac854edSJunchao Zhang     const PetscInt             *Bi = b->i, *Bj = b->j, *Bdiag = b->diag;
1937aac854edSJunchao Zhang     const MatScalar            *Ba = b->a;
1938aac854edSJunchao Zhang     PetscInt                    m = B->rmap->n, n = B->cmap->n;
1939aac854edSJunchao Zhang 
1940aac854edSJunchao Zhang     if (factors->iL_h.extent(0) == 0) { // Allocate memory and copy the L, U structure for the first time
1941aac854edSJunchao Zhang       // Allocate memory and copy the structure
1942aac854edSJunchao Zhang       factors->iL_h = MatRowMapKokkosViewHost(NoInit("iL_h"), m + 1);
1943aac854edSJunchao Zhang       factors->jL_h = MatColIdxKokkosViewHost(NoInit("jL_h"), (Bi[m] - Bi[0]) + m); // + the diagonal entries
1944aac854edSJunchao Zhang       factors->aL_h = MatScalarKokkosViewHost(NoInit("aL_h"), (Bi[m] - Bi[0]) + m);
1945aac854edSJunchao Zhang       factors->iU_h = MatRowMapKokkosViewHost(NoInit("iU_h"), m + 1);
1946aac854edSJunchao Zhang       factors->jU_h = MatColIdxKokkosViewHost(NoInit("jU_h"), (Bdiag[0] - Bdiag[m]));
1947aac854edSJunchao Zhang       factors->aU_h = MatScalarKokkosViewHost(NoInit("aU_h"), (Bdiag[0] - Bdiag[m]));
1948aac854edSJunchao Zhang 
1949aac854edSJunchao Zhang       PetscInt *Li = factors->iL_h.data();
1950aac854edSJunchao Zhang       PetscInt *Lj = factors->jL_h.data();
1951aac854edSJunchao Zhang       PetscInt *Ui = factors->iU_h.data();
1952aac854edSJunchao Zhang       PetscInt *Uj = factors->jU_h.data();
1953aac854edSJunchao Zhang 
1954aac854edSJunchao Zhang       Li[0] = Ui[0] = 0;
1955aac854edSJunchao Zhang       for (PetscInt i = 0; i < m; i++) {
1956aac854edSJunchao Zhang         PetscInt llen = Bi[i + 1] - Bi[i];       // exclusive of the diagonal entry
1957aac854edSJunchao Zhang         PetscInt ulen = Bdiag[i] - Bdiag[i + 1]; // inclusive of the diagonal entry
1958aac854edSJunchao Zhang 
195964dc1d19SNuno Nobre         PetscCall(PetscArraycpy(Lj + Li[i], Bj + Bi[i], llen)); // entries of L on the left of the diagonal
1960aac854edSJunchao Zhang         Lj[Li[i] + llen] = i;                                   // diagonal entry of L
1961aac854edSJunchao Zhang 
1962aac854edSJunchao Zhang         Uj[Ui[i]] = i;                                                             // diagonal entry of U
196364dc1d19SNuno Nobre         PetscCall(PetscArraycpy(Uj + Ui[i] + 1, Bj + Bdiag[i + 1] + 1, ulen - 1)); // entries of U on  the right of the diagonal
1964aac854edSJunchao Zhang 
1965aac854edSJunchao Zhang         Li[i + 1] = Li[i] + llen + 1;
1966aac854edSJunchao Zhang         Ui[i + 1] = Ui[i] + ulen;
1967aac854edSJunchao Zhang       }
1968aac854edSJunchao Zhang 
1969aac854edSJunchao Zhang       factors->iL_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->iL_h);
1970aac854edSJunchao Zhang       factors->jL_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->jL_h);
1971aac854edSJunchao Zhang       factors->iU_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->iU_h);
1972aac854edSJunchao Zhang       factors->jU_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->jU_h);
1973aac854edSJunchao Zhang       factors->aL_d = Kokkos::create_mirror_view(DefaultMemorySpace(), factors->aL_h);
1974aac854edSJunchao Zhang       factors->aU_d = Kokkos::create_mirror_view(DefaultMemorySpace(), factors->aU_h);
1975aac854edSJunchao Zhang 
1976aac854edSJunchao Zhang       // Copy row/col permutation to device
1977aac854edSJunchao Zhang       IS        rowperm = ((Mat_SeqAIJ *)B->data)->row;
1978aac854edSJunchao Zhang       PetscBool row_identity;
1979aac854edSJunchao Zhang       PetscCall(ISIdentity(rowperm, &row_identity));
1980aac854edSJunchao Zhang       if (!row_identity) {
1981aac854edSJunchao Zhang         const PetscInt *ip;
1982aac854edSJunchao Zhang 
1983aac854edSJunchao Zhang         PetscCall(ISGetIndices(rowperm, &ip));
1984aac854edSJunchao Zhang         factors->rowperm = PetscIntKokkosView(NoInit("rowperm"), m);
1985aac854edSJunchao Zhang         PetscCallCXX(Kokkos::deep_copy(factors->rowperm, PetscIntKokkosViewHost(const_cast<PetscInt *>(ip), m)));
1986aac854edSJunchao Zhang         PetscCall(ISRestoreIndices(rowperm, &ip));
1987aac854edSJunchao Zhang         PetscCall(PetscLogCpuToGpu(m * sizeof(PetscInt)));
1988aac854edSJunchao Zhang       }
1989aac854edSJunchao Zhang 
1990aac854edSJunchao Zhang       IS        colperm = ((Mat_SeqAIJ *)B->data)->col;
1991aac854edSJunchao Zhang       PetscBool col_identity;
1992aac854edSJunchao Zhang       PetscCall(ISIdentity(colperm, &col_identity));
1993aac854edSJunchao Zhang       if (!col_identity) {
1994aac854edSJunchao Zhang         const PetscInt *ip;
1995aac854edSJunchao Zhang 
1996aac854edSJunchao Zhang         PetscCall(ISGetIndices(colperm, &ip));
1997aac854edSJunchao Zhang         factors->colperm = PetscIntKokkosView(NoInit("colperm"), n);
1998aac854edSJunchao Zhang         PetscCallCXX(Kokkos::deep_copy(factors->colperm, PetscIntKokkosViewHost(const_cast<PetscInt *>(ip), n)));
1999aac854edSJunchao Zhang         PetscCall(ISRestoreIndices(colperm, &ip));
2000aac854edSJunchao Zhang         PetscCall(PetscLogCpuToGpu(n * sizeof(PetscInt)));
2001aac854edSJunchao Zhang       }
2002aac854edSJunchao Zhang 
2003aac854edSJunchao Zhang       /* Create sptrsv handles for L, U and their transpose */
2004aac854edSJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE)
2005aac854edSJunchao Zhang       auto sptrsv_alg = SPTRSVAlgorithm::SPTRSV_CUSPARSE;
2006aac854edSJunchao Zhang #else
2007aac854edSJunchao Zhang       auto sptrsv_alg = SPTRSVAlgorithm::SEQLVLSCHD_TP1;
2008aac854edSJunchao Zhang #endif
2009aac854edSJunchao Zhang       factors->khL.create_sptrsv_handle(sptrsv_alg, m, true /* L is lower tri */);
2010aac854edSJunchao Zhang       factors->khU.create_sptrsv_handle(sptrsv_alg, m, false /* U is not lower tri */);
2011aac854edSJunchao Zhang       factors->khLt.create_sptrsv_handle(sptrsv_alg, m, false /* L^T is not lower tri */);
2012aac854edSJunchao Zhang       factors->khUt.create_sptrsv_handle(sptrsv_alg, m, true /* U^T is lower tri */);
2013aac854edSJunchao Zhang     }
2014aac854edSJunchao Zhang 
2015aac854edSJunchao Zhang     // Copy the value
2016aac854edSJunchao Zhang     for (PetscInt i = 0; i < m; i++) {
2017aac854edSJunchao Zhang       PetscInt        llen = Bi[i + 1] - Bi[i];
2018aac854edSJunchao Zhang       PetscInt        ulen = Bdiag[i] - Bdiag[i + 1];
2019aac854edSJunchao Zhang       const PetscInt *Li   = factors->iL_h.data();
2020aac854edSJunchao Zhang       const PetscInt *Ui   = factors->iU_h.data();
2021aac854edSJunchao Zhang 
2022aac854edSJunchao Zhang       PetscScalar *La = factors->aL_h.data();
2023aac854edSJunchao Zhang       PetscScalar *Ua = factors->aU_h.data();
2024aac854edSJunchao Zhang 
202564dc1d19SNuno Nobre       PetscCall(PetscArraycpy(La + Li[i], Ba + Bi[i], llen)); // entries of L
2026aac854edSJunchao Zhang       La[Li[i] + llen] = 1.0;                                 // diagonal entry
2027aac854edSJunchao Zhang 
2028aac854edSJunchao Zhang       Ua[Ui[i]] = 1.0 / Ba[Bdiag[i]];                                            // diagonal entry
202964dc1d19SNuno Nobre       PetscCall(PetscArraycpy(Ua + Ui[i] + 1, Ba + Bdiag[i + 1] + 1, ulen - 1)); // entries of U
2030aac854edSJunchao Zhang     }
2031aac854edSJunchao Zhang 
2032aac854edSJunchao Zhang     PetscCallCXX(Kokkos::deep_copy(factors->aL_d, factors->aL_h));
2033aac854edSJunchao Zhang     PetscCallCXX(Kokkos::deep_copy(factors->aU_d, factors->aU_h));
2034aac854edSJunchao Zhang     // Once the factors' values have changed, we need to update their transpose and redo sptrsv symbolic
2035aac854edSJunchao Zhang     factors->transpose_updated         = PETSC_FALSE;
2036aac854edSJunchao Zhang     factors->sptrsv_symbolic_completed = PETSC_FALSE;
2037aac854edSJunchao Zhang 
2038aac854edSJunchao Zhang     B->ops->solve          = MatSolve_SeqAIJKokkos_LU;
2039aac854edSJunchao Zhang     B->ops->solvetranspose = MatSolveTranspose_SeqAIJKokkos_LU;
2040aac854edSJunchao Zhang   }
2041aac854edSJunchao Zhang 
2042aac854edSJunchao Zhang   B->ops->matsolve          = NULL;
2043aac854edSJunchao Zhang   B->ops->matsolvetranspose = NULL;
2044aac854edSJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
2045aac854edSJunchao Zhang }
2046aac854edSJunchao Zhang 
2047aac854edSJunchao Zhang static PetscErrorCode MatILUFactorNumeric_SeqAIJKokkos_ILU0(Mat B, Mat A, const MatFactorInfo *info)
2048d71ae5a4SJacob Faibussowitsch {
204986a27549SJunchao Zhang   Mat_SeqAIJKokkos           *aijkok   = (Mat_SeqAIJKokkos *)A->spptr;
205086a27549SJunchao Zhang   Mat_SeqAIJKokkosTriFactors *factors  = (Mat_SeqAIJKokkosTriFactors *)B->spptr;
205186a27549SJunchao Zhang   PetscInt                    fill_lev = info->levels;
205286a27549SJunchao Zhang 
205386a27549SJunchao Zhang   PetscFunctionBegin;
20549566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
2055aac854edSJunchao Zhang   PetscCheck(!info->factoronhost, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "MatFactorInfo.factoronhost should be false");
20569566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
2057076ba34aSJunchao Zhang 
2058076ba34aSJunchao Zhang   auto a_d = aijkok->a_dual.view_device();
2059076ba34aSJunchao Zhang   auto i_d = aijkok->i_dual.view_device();
2060076ba34aSJunchao Zhang   auto j_d = aijkok->j_dual.view_device();
2061076ba34aSJunchao Zhang 
2062aac854edSJunchao Zhang   PetscCallCXX(spiluk_numeric(&factors->kh, fill_lev, i_d, j_d, a_d, factors->iL_d, factors->jL_d, factors->aL_d, factors->iU_d, factors->jU_d, factors->aU_d));
206386a27549SJunchao Zhang 
206486a27549SJunchao Zhang   B->assembled              = PETSC_TRUE;
206586a27549SJunchao Zhang   B->preallocated           = PETSC_TRUE;
2066aac854edSJunchao Zhang   B->ops->solve             = MatSolve_SeqAIJKokkos_LU;
2067aac854edSJunchao Zhang   B->ops->solvetranspose    = MatSolveTranspose_SeqAIJKokkos_LU;
206886a27549SJunchao Zhang   B->ops->matsolve          = NULL;
206986a27549SJunchao Zhang   B->ops->matsolvetranspose = NULL;
207086a27549SJunchao Zhang 
207186a27549SJunchao Zhang   /* Once the factors' value changed, we need to update their transpose and sptrsv handle */
207286a27549SJunchao Zhang   factors->transpose_updated         = PETSC_FALSE;
207386a27549SJunchao Zhang   factors->sptrsv_symbolic_completed = PETSC_FALSE;
2074eeadb341SJunchao Zhang   /* TODO: log flops, but how to know that? */
20759566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
20763ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
207786a27549SJunchao Zhang }
207886a27549SJunchao Zhang 
2079aac854edSJunchao Zhang // Use KK's spiluk_symbolic() to do ILU0 symbolic factorization, with no row/col reordering
2080aac854edSJunchao Zhang static PetscErrorCode MatILUFactorSymbolic_SeqAIJKokkos_ILU0(Mat B, Mat A, IS, IS, const MatFactorInfo *info)
2081d71ae5a4SJacob Faibussowitsch {
208286a27549SJunchao Zhang   Mat_SeqAIJKokkos           *aijkok;
208386a27549SJunchao Zhang   Mat_SeqAIJ                 *b;
208486a27549SJunchao Zhang   Mat_SeqAIJKokkosTriFactors *factors  = (Mat_SeqAIJKokkosTriFactors *)B->spptr;
208586a27549SJunchao Zhang   PetscInt                    fill_lev = info->levels;
208686a27549SJunchao Zhang   PetscInt                    nnzA     = ((Mat_SeqAIJ *)A->data)->nz, nnzL, nnzU;
208786a27549SJunchao Zhang   PetscInt                    n        = A->rmap->n;
208886a27549SJunchao Zhang 
208986a27549SJunchao Zhang   PetscFunctionBegin;
2090aac854edSJunchao Zhang   PetscCheck(!info->factoronhost, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "MatFactorInfo's factoronhost should be false as we are doing it on device right now");
20919566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
209286a27549SJunchao Zhang 
209386a27549SJunchao Zhang   /* Create a spiluk handle and then do symbolic factorization */
209486a27549SJunchao Zhang   nnzL = nnzU = PetscRealIntMultTruncate(info->fill, nnzA);
2095aac854edSJunchao Zhang   factors->kh.create_spiluk_handle(SPILUKAlgorithm::SEQLVLSCHD_TP1, n, nnzL, nnzU);
209686a27549SJunchao Zhang 
209786a27549SJunchao Zhang   auto spiluk_handle = factors->kh.get_spiluk_handle();
209886a27549SJunchao Zhang 
209986a27549SJunchao Zhang   Kokkos::realloc(factors->iL_d, n + 1); /* Free old arrays and realloc */
210086a27549SJunchao Zhang   Kokkos::realloc(factors->jL_d, spiluk_handle->get_nnzL());
210186a27549SJunchao Zhang   Kokkos::realloc(factors->iU_d, n + 1);
210286a27549SJunchao Zhang   Kokkos::realloc(factors->jU_d, spiluk_handle->get_nnzU());
210386a27549SJunchao Zhang 
210486a27549SJunchao Zhang   aijkok   = (Mat_SeqAIJKokkos *)A->spptr;
2105076ba34aSJunchao Zhang   auto i_d = aijkok->i_dual.view_device();
2106076ba34aSJunchao Zhang   auto j_d = aijkok->j_dual.view_device();
2107aac854edSJunchao Zhang   PetscCallCXX(spiluk_symbolic(&factors->kh, fill_lev, i_d, j_d, factors->iL_d, factors->jL_d, factors->iU_d, factors->jU_d));
210886a27549SJunchao Zhang   /* TODO: if spiluk_symbolic is asynchronous, do we need to sync before calling get_nnzL()? */
210986a27549SJunchao Zhang 
211086a27549SJunchao Zhang   Kokkos::resize(factors->jL_d, spiluk_handle->get_nnzL()); /* Shrink or expand, and retain old value */
211186a27549SJunchao Zhang   Kokkos::resize(factors->jU_d, spiluk_handle->get_nnzU());
211286a27549SJunchao Zhang   Kokkos::realloc(factors->aL_d, spiluk_handle->get_nnzL()); /* No need to retain old value */
211386a27549SJunchao Zhang   Kokkos::realloc(factors->aU_d, spiluk_handle->get_nnzU());
211486a27549SJunchao Zhang 
211586a27549SJunchao Zhang   /* TODO: add options to select sptrsv algorithms */
211686a27549SJunchao Zhang   /* Create sptrsv handles for L, U and their transpose */
211786a27549SJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE)
2118aac854edSJunchao Zhang   auto sptrsv_alg = SPTRSVAlgorithm::SPTRSV_CUSPARSE;
211986a27549SJunchao Zhang #else
2120aac854edSJunchao Zhang   auto sptrsv_alg = SPTRSVAlgorithm::SEQLVLSCHD_TP1;
212186a27549SJunchao Zhang #endif
212286a27549SJunchao Zhang 
212386a27549SJunchao Zhang   factors->khL.create_sptrsv_handle(sptrsv_alg, n, true /* L is lower tri */);
212486a27549SJunchao Zhang   factors->khU.create_sptrsv_handle(sptrsv_alg, n, false /* U is not lower tri */);
212586a27549SJunchao Zhang   factors->khLt.create_sptrsv_handle(sptrsv_alg, n, false /* L^T is not lower tri */);
212686a27549SJunchao Zhang   factors->khUt.create_sptrsv_handle(sptrsv_alg, n, true /* U^T is lower tri */);
212786a27549SJunchao Zhang 
212886a27549SJunchao Zhang   /* Fill fields of the factor matrix B */
21299566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(B, MAT_SKIP_ALLOCATION, NULL));
213086a27549SJunchao Zhang   b     = (Mat_SeqAIJ *)B->data;
213186a27549SJunchao Zhang   b->nz = b->maxnz          = spiluk_handle->get_nnzL() + spiluk_handle->get_nnzU();
213286a27549SJunchao Zhang   B->info.fill_ratio_given  = info->fill;
2133a1e4e190SStefano Zampini   B->info.fill_ratio_needed = nnzA > 0 ? ((PetscReal)b->nz) / ((PetscReal)nnzA) : 1.0;
213486a27549SJunchao Zhang 
2135aac854edSJunchao Zhang   B->ops->lufactornumeric = MatILUFactorNumeric_SeqAIJKokkos_ILU0;
21363ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2137930e68a5SMark Adams }
2138930e68a5SMark Adams 
2139aac854edSJunchao Zhang static PetscErrorCode MatLUFactorSymbolic_SeqAIJKokkos(Mat B, Mat A, IS isrow, IS iscol, const MatFactorInfo *info)
2140aac854edSJunchao Zhang {
2141aac854edSJunchao Zhang   PetscFunctionBegin;
2142aac854edSJunchao Zhang   PetscCall(MatLUFactorSymbolic_SeqAIJ(B, A, isrow, iscol, info));
2143aac854edSJunchao Zhang   PetscCheck(!B->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr");
2144aac854edSJunchao Zhang   PetscCallCXX(B->spptr = new Mat_SeqAIJKokkosTriFactors(B->rmap->n));
2145aac854edSJunchao Zhang   B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJKokkos;
2146aac854edSJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
2147aac854edSJunchao Zhang }
2148aac854edSJunchao Zhang 
2149aac854edSJunchao Zhang static PetscErrorCode MatILUFactorSymbolic_SeqAIJKokkos(Mat B, Mat A, IS isrow, IS iscol, const MatFactorInfo *info)
2150aac854edSJunchao Zhang {
2151aac854edSJunchao Zhang   PetscBool row_identity = PETSC_FALSE, col_identity = PETSC_FALSE;
2152aac854edSJunchao Zhang 
2153aac854edSJunchao Zhang   PetscFunctionBegin;
2154aac854edSJunchao Zhang   if (!info->factoronhost) {
2155aac854edSJunchao Zhang     PetscCall(ISIdentity(isrow, &row_identity));
2156aac854edSJunchao Zhang     PetscCall(ISIdentity(iscol, &col_identity));
2157aac854edSJunchao Zhang   }
2158aac854edSJunchao Zhang 
2159aac854edSJunchao Zhang   PetscCheck(!B->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr");
2160aac854edSJunchao Zhang   PetscCallCXX(B->spptr = new Mat_SeqAIJKokkosTriFactors(B->rmap->n));
2161aac854edSJunchao Zhang 
2162aac854edSJunchao Zhang   if (!info->factoronhost && !info->levels && row_identity && col_identity) { // if level 0 and no reordering
2163aac854edSJunchao Zhang     PetscCall(MatILUFactorSymbolic_SeqAIJKokkos_ILU0(B, A, isrow, iscol, info));
2164aac854edSJunchao Zhang   } else {
2165aac854edSJunchao Zhang     PetscCall(MatILUFactorSymbolic_SeqAIJ(B, A, isrow, iscol, info)); // otherwise, use PETSc's ILU on host
2166aac854edSJunchao Zhang     B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJKokkos;
2167aac854edSJunchao Zhang   }
2168aac854edSJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
2169aac854edSJunchao Zhang }
2170aac854edSJunchao Zhang 
2171aac854edSJunchao Zhang static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJKokkos(Mat B, Mat A, const MatFactorInfo *info)
2172aac854edSJunchao Zhang {
2173aac854edSJunchao Zhang   PetscFunctionBegin;
2174aac854edSJunchao Zhang   PetscCall(MatSeqAIJKokkosSyncHost(A));
2175aac854edSJunchao Zhang   PetscCall(MatCholeskyFactorNumeric_SeqAIJ(B, A, info));
2176aac854edSJunchao Zhang 
2177aac854edSJunchao Zhang   if (!info->solveonhost) { // if solve on host, then we don't need to copy L, U to device
2178aac854edSJunchao Zhang     Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)B->spptr;
2179aac854edSJunchao Zhang     Mat_SeqAIJ                 *b       = static_cast<Mat_SeqAIJ *>(B->data);
2180aac854edSJunchao Zhang     const PetscInt             *Bi = b->i, *Bj = b->j, *Bdiag = b->diag;
2181aac854edSJunchao Zhang     const MatScalar            *Ba = b->a;
2182aac854edSJunchao Zhang     PetscInt                    m  = B->rmap->n;
2183aac854edSJunchao Zhang 
2184aac854edSJunchao Zhang     if (factors->iU_h.extent(0) == 0) { // First time of numeric factorization
2185aac854edSJunchao Zhang       // Allocate memory and copy the structure
2186aac854edSJunchao Zhang       factors->iU_h = PetscIntKokkosViewHost(const_cast<PetscInt *>(Bi), m + 1); // wrap Bi as iU_h
2187aac854edSJunchao Zhang       factors->jU_h = MatColIdxKokkosViewHost(NoInit("jU_h"), Bi[m]);
2188aac854edSJunchao Zhang       factors->aU_h = MatScalarKokkosViewHost(NoInit("aU_h"), Bi[m]);
2189aac854edSJunchao Zhang       factors->D_h  = MatScalarKokkosViewHost(NoInit("D_h"), m);
2190aac854edSJunchao Zhang       factors->aU_d = Kokkos::create_mirror_view(DefaultMemorySpace(), factors->aU_h);
2191aac854edSJunchao Zhang       factors->D_d  = Kokkos::create_mirror_view(DefaultMemorySpace(), factors->D_h);
2192aac854edSJunchao Zhang 
2193aac854edSJunchao Zhang       // Build jU_h from the skewed Aj
2194aac854edSJunchao Zhang       PetscInt *Uj = factors->jU_h.data();
2195aac854edSJunchao Zhang       for (PetscInt i = 0; i < m; i++) {
2196aac854edSJunchao Zhang         PetscInt ulen = Bi[i + 1] - Bi[i];
2197aac854edSJunchao Zhang         Uj[Bi[i]]     = i;                                              // diagonal entry
2198aac854edSJunchao Zhang         PetscCall(PetscArraycpy(Uj + Bi[i] + 1, Bj + Bi[i], ulen - 1)); // entries of U on the right of the diagonal
2199aac854edSJunchao Zhang       }
2200aac854edSJunchao Zhang 
2201aac854edSJunchao Zhang       // Copy iU, jU to device
2202aac854edSJunchao Zhang       PetscCallCXX(factors->iU_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->iU_h));
2203aac854edSJunchao Zhang       PetscCallCXX(factors->jU_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->jU_h));
2204aac854edSJunchao Zhang 
2205aac854edSJunchao Zhang       // Copy row/col permutation to device
2206aac854edSJunchao Zhang       IS        rowperm = ((Mat_SeqAIJ *)B->data)->row;
2207aac854edSJunchao Zhang       PetscBool row_identity;
2208aac854edSJunchao Zhang       PetscCall(ISIdentity(rowperm, &row_identity));
2209aac854edSJunchao Zhang       if (!row_identity) {
2210aac854edSJunchao Zhang         const PetscInt *ip;
2211aac854edSJunchao Zhang 
2212aac854edSJunchao Zhang         PetscCall(ISGetIndices(rowperm, &ip));
2213aac854edSJunchao Zhang         PetscCallCXX(factors->rowperm = PetscIntKokkosView(NoInit("rowperm"), m));
2214aac854edSJunchao Zhang         PetscCallCXX(Kokkos::deep_copy(factors->rowperm, PetscIntKokkosViewHost(const_cast<PetscInt *>(ip), m)));
2215aac854edSJunchao Zhang         PetscCall(ISRestoreIndices(rowperm, &ip));
2216aac854edSJunchao Zhang         PetscCall(PetscLogCpuToGpu(m * sizeof(PetscInt)));
2217aac854edSJunchao Zhang       }
2218aac854edSJunchao Zhang 
2219aac854edSJunchao Zhang       // Create sptrsv handles for U and U^T
2220aac854edSJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE)
2221aac854edSJunchao Zhang       auto sptrsv_alg = SPTRSVAlgorithm::SPTRSV_CUSPARSE;
2222aac854edSJunchao Zhang #else
2223aac854edSJunchao Zhang       auto sptrsv_alg = SPTRSVAlgorithm::SEQLVLSCHD_TP1;
2224aac854edSJunchao Zhang #endif
2225aac854edSJunchao Zhang       factors->khU.create_sptrsv_handle(sptrsv_alg, m, false /* U is not lower tri */);
2226aac854edSJunchao Zhang       factors->khUt.create_sptrsv_handle(sptrsv_alg, m, true /* U^T is lower tri */);
2227aac854edSJunchao Zhang     }
2228aac854edSJunchao Zhang     // These pointers were set MatCholeskyFactorNumeric_SeqAIJ(), so we always need to update them
2229aac854edSJunchao Zhang     B->ops->solve          = MatSolve_SeqAIJKokkos_Cholesky;
2230aac854edSJunchao Zhang     B->ops->solvetranspose = MatSolve_SeqAIJKokkos_Cholesky;
2231aac854edSJunchao Zhang 
2232aac854edSJunchao Zhang     // Copy the value
2233aac854edSJunchao Zhang     PetscScalar *Ua = factors->aU_h.data();
2234aac854edSJunchao Zhang     PetscScalar *D  = factors->D_h.data();
2235aac854edSJunchao Zhang     for (PetscInt i = 0; i < m; i++) {
2236aac854edSJunchao Zhang       D[i]      = Ba[Bdiag[i]];     // actually Aa[Adiag[i]] is the inverse of the diagonal
2237aac854edSJunchao Zhang       Ua[Bi[i]] = (PetscScalar)1.0; // set the unit diagonal for U
2238aac854edSJunchao Zhang       for (PetscInt k = 0; k < Bi[i + 1] - Bi[i] - 1; k++) Ua[Bi[i] + 1 + k] = -Ba[Bi[i] + k];
2239aac854edSJunchao Zhang     }
2240aac854edSJunchao Zhang     PetscCallCXX(Kokkos::deep_copy(factors->aU_d, factors->aU_h));
2241aac854edSJunchao Zhang     PetscCallCXX(Kokkos::deep_copy(factors->D_d, factors->D_h));
2242aac854edSJunchao Zhang 
2243aac854edSJunchao Zhang     factors->sptrsv_symbolic_completed = PETSC_FALSE; // When numeric value changed, we must do these again
2244aac854edSJunchao Zhang     factors->transpose_updated         = PETSC_FALSE;
2245aac854edSJunchao Zhang   }
2246aac854edSJunchao Zhang 
2247aac854edSJunchao Zhang   B->ops->matsolve          = NULL;
2248aac854edSJunchao Zhang   B->ops->matsolvetranspose = NULL;
2249aac854edSJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
2250aac854edSJunchao Zhang }
2251aac854edSJunchao Zhang 
2252aac854edSJunchao Zhang static PetscErrorCode MatICCFactorSymbolic_SeqAIJKokkos(Mat B, Mat A, IS perm, const MatFactorInfo *info)
2253aac854edSJunchao Zhang {
2254aac854edSJunchao Zhang   PetscFunctionBegin;
2255aac854edSJunchao Zhang   if (info->solveonhost) {
2256aac854edSJunchao Zhang     // If solve on host, we have to change the type, as eventually we need to call MatSolve_SeqSBAIJ_1_NaturalOrdering() etc.
2257aac854edSJunchao Zhang     PetscCall(MatSetType(B, MATSEQSBAIJ));
2258aac854edSJunchao Zhang     PetscCall(MatSeqSBAIJSetPreallocation(B, 1, MAT_SKIP_ALLOCATION, NULL));
2259aac854edSJunchao Zhang   }
2260aac854edSJunchao Zhang 
2261aac854edSJunchao Zhang   PetscCall(MatICCFactorSymbolic_SeqAIJ(B, A, perm, info));
2262aac854edSJunchao Zhang 
2263aac854edSJunchao Zhang   if (!info->solveonhost) {
2264bfe80ac4SPierre Jolivet     // If solve on device, B is still a MATSEQAIJKOKKOS, so we are good to allocate B->spptr
2265aac854edSJunchao Zhang     PetscCheck(!B->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr");
2266aac854edSJunchao Zhang     PetscCallCXX(B->spptr = new Mat_SeqAIJKokkosTriFactors(B->rmap->n));
2267aac854edSJunchao Zhang     B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJKokkos;
2268aac854edSJunchao Zhang   }
2269aac854edSJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
2270aac854edSJunchao Zhang }
2271aac854edSJunchao Zhang 
2272aac854edSJunchao Zhang static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJKokkos(Mat B, Mat A, IS perm, const MatFactorInfo *info)
2273aac854edSJunchao Zhang {
2274aac854edSJunchao Zhang   PetscFunctionBegin;
2275aac854edSJunchao Zhang   if (info->solveonhost) {
2276aac854edSJunchao Zhang     // If solve on host, we have to change the type, as eventually we need to call MatSolve_SeqSBAIJ_1_NaturalOrdering() etc.
2277aac854edSJunchao Zhang     PetscCall(MatSetType(B, MATSEQSBAIJ));
2278aac854edSJunchao Zhang     PetscCall(MatSeqSBAIJSetPreallocation(B, 1, MAT_SKIP_ALLOCATION, NULL));
2279aac854edSJunchao Zhang   }
2280aac854edSJunchao Zhang 
2281aac854edSJunchao Zhang   PetscCall(MatCholeskyFactorSymbolic_SeqAIJ(B, A, perm, info)); // it sets B's two ISes ((Mat_SeqAIJ*)B->data)->{row, col} to perm
2282aac854edSJunchao Zhang 
2283aac854edSJunchao Zhang   if (!info->solveonhost) {
2284bfe80ac4SPierre Jolivet     // If solve on device, B is still a MATSEQAIJKOKKOS, so we are good to allocate B->spptr
2285aac854edSJunchao Zhang     PetscCheck(!B->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr");
2286aac854edSJunchao Zhang     PetscCallCXX(B->spptr = new Mat_SeqAIJKokkosTriFactors(B->rmap->n));
2287aac854edSJunchao Zhang     B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJKokkos;
2288aac854edSJunchao Zhang   }
2289aac854edSJunchao Zhang   PetscFunctionReturn(PETSC_SUCCESS);
2290aac854edSJunchao Zhang }
2291aac854edSJunchao Zhang 
2292aac854edSJunchao Zhang // The _Kokkos suffix means we will use Kokkos as a solver for the SeqAIJKokkos matrix
2293aac854edSJunchao Zhang static PetscErrorCode MatFactorGetSolverType_SeqAIJKokkos_Kokkos(Mat A, MatSolverType *type)
2294d71ae5a4SJacob Faibussowitsch {
2295930e68a5SMark Adams   PetscFunctionBegin;
2296930e68a5SMark Adams   *type = MATSOLVERKOKKOS;
22973ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2298930e68a5SMark Adams }
2299930e68a5SMark Adams 
2300930e68a5SMark Adams /*MC
230186a27549SJunchao Zhang   MATSOLVERKOKKOS = "Kokkos" - A matrix solver type providing triangular solvers for sequential matrices
230211a5261eSBarry Smith   on a single GPU of type, `MATSEQAIJKOKKOS`, `MATAIJKOKKOS`.
2303930e68a5SMark Adams 
2304930e68a5SMark Adams   Level: beginner
2305930e68a5SMark Adams 
2306e255e071SSatish Balay .seealso: [](ch_matrices), `Mat`, `PCFactorSetMatSolverType()`, `MatSolverType`, `MatCreateSeqAIJKokkos()`, `MATAIJKOKKOS`
2307930e68a5SMark Adams M*/
230886a27549SJunchao Zhang PETSC_EXTERN PetscErrorCode MatGetFactor_SeqAIJKokkos_Kokkos(Mat A, MatFactorType ftype, Mat *B) /* MatGetFactor_<MatType>_<MatSolverType> */
2309930e68a5SMark Adams {
2310930e68a5SMark Adams   PetscInt n = A->rmap->n;
2311aac854edSJunchao Zhang   MPI_Comm comm;
2312930e68a5SMark Adams 
2313930e68a5SMark Adams   PetscFunctionBegin;
2314aac854edSJunchao Zhang   PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
2315aac854edSJunchao Zhang   PetscCall(MatCreate(comm, B));
23169566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*B, n, n, n, n));
2317aac854edSJunchao Zhang   PetscCall(MatSetBlockSizesFromMats(*B, A, A));
2318930e68a5SMark Adams   (*B)->factortype = ftype;
23199566063dSJacob Faibussowitsch   PetscCall(MatSetType(*B, MATSEQAIJKOKKOS));
23209566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJSetPreallocation(*B, MAT_SKIP_ALLOCATION, NULL));
2321aac854edSJunchao Zhang   PetscCheck(!(*B)->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr");
2322aac854edSJunchao Zhang 
2323aac854edSJunchao Zhang   if (ftype == MAT_FACTOR_LU || ftype == MAT_FACTOR_ILU || ftype == MAT_FACTOR_ILUDT) {
2324aac854edSJunchao Zhang     (*B)->ops->lufactorsymbolic  = MatLUFactorSymbolic_SeqAIJKokkos;
2325aac854edSJunchao Zhang     (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJKokkos;
2326aac854edSJunchao Zhang     PetscCall(PetscStrallocpy(MATORDERINGND, (char **)&(*B)->preferredordering[MAT_FACTOR_LU]));
2327aac854edSJunchao Zhang     PetscCall(PetscStrallocpy(MATORDERINGNATURAL, (char **)&(*B)->preferredordering[MAT_FACTOR_ILU]));
2328aac854edSJunchao Zhang     PetscCall(PetscStrallocpy(MATORDERINGNATURAL, (char **)&(*B)->preferredordering[MAT_FACTOR_ILUDT]));
2329aac854edSJunchao Zhang   } else if (ftype == MAT_FACTOR_CHOLESKY || ftype == MAT_FACTOR_ICC) {
2330aac854edSJunchao Zhang     (*B)->ops->iccfactorsymbolic      = MatICCFactorSymbolic_SeqAIJKokkos;
2331aac854edSJunchao Zhang     (*B)->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SeqAIJKokkos;
2332aac854edSJunchao Zhang     PetscCall(PetscStrallocpy(MATORDERINGND, (char **)&(*B)->preferredordering[MAT_FACTOR_CHOLESKY]));
2333aac854edSJunchao Zhang     PetscCall(PetscStrallocpy(MATORDERINGNATURAL, (char **)&(*B)->preferredordering[MAT_FACTOR_ICC]));
2334aac854edSJunchao Zhang   } else SETERRQ(comm, PETSC_ERR_SUP, "MatFactorType %s is not supported by MatType SeqAIJKokkos", MatFactorTypes[ftype]);
2335aac854edSJunchao Zhang 
2336aac854edSJunchao Zhang   // The factorization can use the ordering provided in MatLUFactorSymbolic(), MatCholeskyFactorSymbolic() etc, though we do it on host
2337aac854edSJunchao Zhang   (*B)->canuseordering = PETSC_TRUE;
2338aac854edSJunchao Zhang   PetscCall(PetscObjectComposeFunction((PetscObject)*B, "MatFactorGetSolverType_C", MatFactorGetSolverType_SeqAIJKokkos_Kokkos));
23393ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2340930e68a5SMark Adams }
23418f7e8f9dSMark Adams 
2342aac854edSJunchao Zhang PETSC_INTERN PetscErrorCode MatSolverTypeRegister_Kokkos(void)
2343d71ae5a4SJacob Faibussowitsch {
234486a27549SJunchao Zhang   PetscFunctionBegin;
23459566063dSJacob Faibussowitsch   PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS, MATSEQAIJKOKKOS, MAT_FACTOR_LU, MatGetFactor_SeqAIJKokkos_Kokkos));
2346aac854edSJunchao Zhang   PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS, MATSEQAIJKOKKOS, MAT_FACTOR_CHOLESKY, MatGetFactor_SeqAIJKokkos_Kokkos));
23479566063dSJacob Faibussowitsch   PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS, MATSEQAIJKOKKOS, MAT_FACTOR_ILU, MatGetFactor_SeqAIJKokkos_Kokkos));
2348aac854edSJunchao Zhang   PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS, MATSEQAIJKOKKOS, MAT_FACTOR_ICC, MatGetFactor_SeqAIJKokkos_Kokkos));
23493ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
235086a27549SJunchao Zhang }
235186a27549SJunchao Zhang 
2352076ba34aSJunchao Zhang /* Utility to print out a KokkosCsrMatrix for debugging */
2353d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode PrintCsrMatrix(const KokkosCsrMatrix &csrmat)
2354d71ae5a4SJacob Faibussowitsch {
235545402d8aSJunchao Zhang   const auto        &iv = Kokkos::create_mirror_view_and_copy(HostMirrorMemorySpace(), csrmat.graph.row_map);
235645402d8aSJunchao Zhang   const auto        &jv = Kokkos::create_mirror_view_and_copy(HostMirrorMemorySpace(), csrmat.graph.entries);
235745402d8aSJunchao Zhang   const auto        &av = Kokkos::create_mirror_view_and_copy(HostMirrorMemorySpace(), csrmat.values);
2358076ba34aSJunchao Zhang   const PetscInt    *i  = iv.data();
2359076ba34aSJunchao Zhang   const PetscInt    *j  = jv.data();
2360076ba34aSJunchao Zhang   const PetscScalar *a  = av.data();
2361076ba34aSJunchao Zhang   PetscInt           m = csrmat.numRows(), n = csrmat.numCols(), nnz = csrmat.nnz();
2362076ba34aSJunchao Zhang 
2363076ba34aSJunchao Zhang   PetscFunctionBegin;
23649566063dSJacob Faibussowitsch   PetscCall(PetscPrintf(PETSC_COMM_SELF, "%" PetscInt_FMT " x %" PetscInt_FMT " SeqAIJKokkos, with %" PetscInt_FMT " nonzeros\n", m, n, nnz));
2365076ba34aSJunchao Zhang   for (PetscInt k = 0; k < m; k++) {
23669566063dSJacob Faibussowitsch     PetscCall(PetscPrintf(PETSC_COMM_SELF, "%" PetscInt_FMT ": ", k));
236748a46eb9SPierre Jolivet     for (PetscInt p = i[k]; p < i[k + 1]; p++) PetscCall(PetscPrintf(PETSC_COMM_SELF, "%" PetscInt_FMT "(%.1f), ", j[p], (double)PetscRealPart(a[p])));
23689566063dSJacob Faibussowitsch     PetscCall(PetscPrintf(PETSC_COMM_SELF, "\n"));
2369076ba34aSJunchao Zhang   }
23703ba16761SJacob Faibussowitsch   PetscFunctionReturn(PETSC_SUCCESS);
2371076ba34aSJunchao Zhang }
2372