1e36ced11SJunchao Zhang #include <petsc_kokkos.hpp> 211d22bbfSJunchao Zhang #include <petscvec_kokkos.hpp> 3c0c276a7Ssdargavi #include <petscmat_kokkos.hpp> 4076ba34aSJunchao Zhang #include <petscpkg_version.h> 5152b3e56SJunchao Zhang #include <petsc/private/petscimpl.h> 642550becSJunchao Zhang #include <petsc/private/sfimpl.h> 7aac854edSJunchao Zhang #include <petsc/private/kokkosimpl.hpp> 87233ce55SJed Brown #include <petscsys.h> 98c3ff71bSJunchao Zhang 108c3ff71bSJunchao Zhang #include <Kokkos_Core.hpp> 11f0cf5187SStefano Zampini #include <KokkosBlas.hpp> 128c3ff71bSJunchao Zhang #include <KokkosSparse_CrsMatrix.hpp> 13cc6e31f1SJunchao Zhang 14cc6e31f1SJunchao Zhang // To suppress compiler warnings: 15cc6e31f1SJunchao Zhang // /path/include/KokkosSparse_spmv_bsrmatrix_tpl_spec_decl.hpp:434:63: 16cc6e31f1SJunchao Zhang // warning: 'cusparseStatus_t cusparseDbsrmm(cusparseHandle_t, cusparseDirection_t, cusparseOperation_t, 17cc6e31f1SJunchao Zhang // cusparseOperation_t, int, int, int, int, const double*, cusparseMatDescr_t, const double*, const int*, const int*, 18cc6e31f1SJunchao Zhang // int, const double*, int, const double*, double*, int)' is deprecated: please use cusparseSpMM instead [-Wdeprecated-declarations] 19cc6e31f1SJunchao Zhang PETSC_PRAGMA_DIAGNOSTIC_IGNORED_BEGIN("-Wdeprecated-declarations") 208c3ff71bSJunchao Zhang #include <KokkosSparse_spmv.hpp> 21cc6e31f1SJunchao Zhang PETSC_PRAGMA_DIAGNOSTIC_IGNORED_END() 22cc6e31f1SJunchao Zhang 2386a27549SJunchao Zhang #include <KokkosSparse_spiluk.hpp> 2486a27549SJunchao Zhang #include <KokkosSparse_sptrsv.hpp> 25076ba34aSJunchao Zhang #include <KokkosSparse_spgemm.hpp> 26076ba34aSJunchao Zhang #include <KokkosSparse_spadd.hpp> 279d13fa56SJunchao Zhang #include <KokkosBatched_LU_Decl.hpp> 289d13fa56SJunchao Zhang #include <KokkosBatched_InverseLU_Decl.hpp> 2986a27549SJunchao Zhang 3042550becSJunchao Zhang #include <../src/mat/impls/aij/seq/kokkos/aijkok.hpp> 318c3ff71bSJunchao Zhang 320e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_GE(3, 7, 0) 33f98996d3SJunchao Zhang #include <KokkosSparse_Utils.hpp> 34f98996d3SJunchao Zhang using KokkosSparse::sort_crs_matrix; 359371c9d4SSatish Balay using KokkosSparse::Impl::transpose_matrix; 36f98996d3SJunchao Zhang #else 37f98996d3SJunchao Zhang #include <KokkosKernels_Sorting.hpp> 38f98996d3SJunchao Zhang using KokkosKernels::sort_crs_matrix; 399371c9d4SSatish Balay using KokkosKernels::Impl::transpose_matrix; 40f98996d3SJunchao Zhang #endif 41f98996d3SJunchao Zhang 42aac854edSJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_GE(4, 6, 0) 43aac854edSJunchao Zhang using KokkosSparse::spiluk_symbolic; 44aac854edSJunchao Zhang using KokkosSparse::spiluk_numeric; 45aac854edSJunchao Zhang using KokkosSparse::sptrsv_symbolic; 46aac854edSJunchao Zhang using KokkosSparse::sptrsv_solve; 47aac854edSJunchao Zhang using KokkosSparse::Experimental::SPTRSVAlgorithm; 48aac854edSJunchao Zhang using KokkosSparse::Experimental::SPILUKAlgorithm; 49aac854edSJunchao Zhang #else 50aac854edSJunchao Zhang using KokkosSparse::Experimental::spiluk_symbolic; 51aac854edSJunchao Zhang using KokkosSparse::Experimental::spiluk_numeric; 52aac854edSJunchao Zhang using KokkosSparse::Experimental::sptrsv_symbolic; 53aac854edSJunchao Zhang using KokkosSparse::Experimental::sptrsv_solve; 54aac854edSJunchao Zhang using KokkosSparse::Experimental::SPTRSVAlgorithm; 55aac854edSJunchao Zhang using KokkosSparse::Experimental::SPILUKAlgorithm; 56aac854edSJunchao Zhang #endif 57aac854edSJunchao Zhang 588c3ff71bSJunchao Zhang static PetscErrorCode MatSetOps_SeqAIJKokkos(Mat); /* Forward declaration */ 598c3ff71bSJunchao Zhang 60076ba34aSJunchao Zhang /* MatAssemblyEnd_SeqAIJKokkos() happens when we finalized nonzeros of the matrix, either after 61076ba34aSJunchao Zhang we assembled the matrix on host, or after we directly produced the matrix data on device (ex., through MatMatMult). 62076ba34aSJunchao Zhang In the latter case, it is important to set a_dual's sync state correctly. 63076ba34aSJunchao Zhang */ 64d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatAssemblyEnd_SeqAIJKokkos(Mat A, MatAssemblyType mode) 65d71ae5a4SJacob Faibussowitsch { 66076ba34aSJunchao Zhang Mat_SeqAIJ *aijseq; 67076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 688c3ff71bSJunchao Zhang 698c3ff71bSJunchao Zhang PetscFunctionBegin; 703ba16761SJacob Faibussowitsch if (mode == MAT_FLUSH_ASSEMBLY) PetscFunctionReturn(PETSC_SUCCESS); 719566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd_SeqAIJ(A, mode)); 72076ba34aSJunchao Zhang 73076ba34aSJunchao Zhang aijseq = static_cast<Mat_SeqAIJ *>(A->data); 74076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 75076ba34aSJunchao Zhang 76076ba34aSJunchao Zhang /* If aijkok does not exist, we just copy i, j to device. 77076ba34aSJunchao Zhang If aijkok already exists, but the device's nonzero pattern does not match with the host's, we assume the latest data is on host. 78076ba34aSJunchao Zhang In both cases, we build a new aijkok structure. 79076ba34aSJunchao Zhang */ 80076ba34aSJunchao Zhang if (!aijkok || aijkok->nonzerostate != A->nonzerostate) { /* aijkok might not exist yet or nonzero pattern has changed */ 81076ba34aSJunchao Zhang delete aijkok; 82f4747e26SJunchao Zhang aijkok = new Mat_SeqAIJKokkos(A->rmap->n, A->cmap->n, aijseq, A->nonzerostate, PETSC_FALSE /*don't copy mat values to device*/); 83076ba34aSJunchao Zhang A->spptr = aijkok; 84f4747e26SJunchao Zhang } else if (A->rmap->n && aijkok->diag_dual.extent(0) == 0) { // MatProduct might directly produce AIJ on device, but not the diag. 85f4747e26SJunchao Zhang MatRowMapKokkosViewHost diag_h(aijseq->diag, A->rmap->n); 86f4747e26SJunchao Zhang auto diag_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), diag_h); 87f4747e26SJunchao Zhang aijkok->diag_dual = MatRowMapKokkosDualView(diag_d, diag_h); 88076ba34aSJunchao Zhang } 893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 908c3ff71bSJunchao Zhang } 918c3ff71bSJunchao Zhang 9286a27549SJunchao Zhang /* Sync CSR data to device if not yet */ 93d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatSeqAIJKokkosSyncDevice(Mat A) 94d71ae5a4SJacob Faibussowitsch { 958c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 968c3ff71bSJunchao Zhang 978c3ff71bSJunchao Zhang PetscFunctionBegin; 98aaa8cc7dSPierre Jolivet PetscCheck(A->factortype == MAT_FACTOR_NONE, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Can't sync factorized matrix from host to device"); 995f80ce2aSJacob Faibussowitsch PetscCheck(aijkok, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr"); 100076ba34aSJunchao Zhang if (aijkok->a_dual.need_sync_device()) { 101076ba34aSJunchao Zhang aijkok->a_dual.sync_device(); 102580c7c76SPierre Jolivet aijkok->transpose_updated = PETSC_FALSE; /* values of the transpose is out-of-date */ 10386a27549SJunchao Zhang aijkok->hermitian_updated = PETSC_FALSE; 1048c3ff71bSJunchao Zhang } 1053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1068c3ff71bSJunchao Zhang } 1078c3ff71bSJunchao Zhang 108076ba34aSJunchao Zhang /* Mark the CSR data on device as modified */ 109d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatSeqAIJKokkosModifyDevice(Mat A) 110d71ae5a4SJacob Faibussowitsch { 11186a27549SJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 11286a27549SJunchao Zhang 11386a27549SJunchao Zhang PetscFunctionBegin; 1145f80ce2aSJacob Faibussowitsch PetscCheck(A->factortype == MAT_FACTOR_NONE, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Not supported for factorized matries"); 11586a27549SJunchao Zhang aijkok->a_dual.clear_sync_state(); 11686a27549SJunchao Zhang aijkok->a_dual.modify_device(); 11786a27549SJunchao Zhang aijkok->transpose_updated = PETSC_FALSE; 11886a27549SJunchao Zhang aijkok->hermitian_updated = PETSC_FALSE; 1199566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(A)); 1209566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 1213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12286a27549SJunchao Zhang } 12386a27549SJunchao Zhang 124d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJKokkosSyncHost(Mat A) 125d71ae5a4SJacob Faibussowitsch { 126f0cf5187SStefano Zampini Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1274df4a32cSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 128f0cf5187SStefano Zampini 129f0cf5187SStefano Zampini PetscFunctionBegin; 130f0cf5187SStefano Zampini PetscCheckTypeName(A, MATSEQAIJKOKKOS); 13186a27549SJunchao Zhang /* We do not expect one needs factors on host */ 132aaa8cc7dSPierre Jolivet PetscCheck(A->factortype == MAT_FACTOR_NONE, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Can't sync factorized matrix from device to host"); 1335f80ce2aSJacob Faibussowitsch PetscCheck(aijkok, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing AIJKOK"); 134aac854edSJunchao Zhang PetscCall(KokkosDualViewSync<HostMirrorMemorySpace>(aijkok->a_dual, exec)); 1353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 136f0cf5187SStefano Zampini } 137f0cf5187SStefano Zampini 138d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetArray_SeqAIJKokkos(Mat A, PetscScalar *array[]) 139d71ae5a4SJacob Faibussowitsch { 140076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 141f0cf5187SStefano Zampini 142f0cf5187SStefano Zampini PetscFunctionBegin; 1435519a089SJose E. Roman /* aijkok contains valid pointers only if the host's nonzerostate matches with the device's. 1445519a089SJose E. Roman Calling MatSeqAIJSetPreallocation() or MatSetValues() on host, where aijseq->{i,j,a} might be 1455519a089SJose E. Roman reallocated, will lead to stale {i,j,a}_dual in aijkok. In both operations, the hosts's nonzerostate 1465519a089SJose E. Roman must have been updated. The stale aijkok will be rebuilt during MatAssemblyEnd. 1475519a089SJose E. Roman */ 1485519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) { 1494df4a32cSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 150e36ced11SJunchao Zhang PetscCallCXX(aijkok->a_dual.sync_host(exec)); 151e36ced11SJunchao Zhang PetscCallCXX(exec.fence()); 152076ba34aSJunchao Zhang *array = aijkok->a_dual.view_host().data(); 153076ba34aSJunchao Zhang } else { /* Happens when calling MatSetValues on a newly created matrix */ 154076ba34aSJunchao Zhang *array = static_cast<Mat_SeqAIJ *>(A->data)->a; 155076ba34aSJunchao Zhang } 1563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 157076ba34aSJunchao Zhang } 158076ba34aSJunchao Zhang 159d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJRestoreArray_SeqAIJKokkos(Mat A, PetscScalar *array[]) 160d71ae5a4SJacob Faibussowitsch { 161076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 162076ba34aSJunchao Zhang 163076ba34aSJunchao Zhang PetscFunctionBegin; 1645519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) aijkok->a_dual.modify_host(); 1653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 166076ba34aSJunchao Zhang } 167076ba34aSJunchao Zhang 168d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetArrayRead_SeqAIJKokkos(Mat A, const PetscScalar *array[]) 169d71ae5a4SJacob Faibussowitsch { 170076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 171076ba34aSJunchao Zhang 172076ba34aSJunchao Zhang PetscFunctionBegin; 1735519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) { 1744df4a32cSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 175e36ced11SJunchao Zhang PetscCallCXX(aijkok->a_dual.sync_host(exec)); 176e36ced11SJunchao Zhang PetscCallCXX(exec.fence()); 177076ba34aSJunchao Zhang *array = aijkok->a_dual.view_host().data(); 1782328674fSJunchao Zhang } else { 1792328674fSJunchao Zhang *array = static_cast<Mat_SeqAIJ *>(A->data)->a; 1802328674fSJunchao Zhang } 1813ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 182076ba34aSJunchao Zhang } 183076ba34aSJunchao Zhang 184d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJRestoreArrayRead_SeqAIJKokkos(Mat A, const PetscScalar *array[]) 185d71ae5a4SJacob Faibussowitsch { 186076ba34aSJunchao Zhang PetscFunctionBegin; 187076ba34aSJunchao Zhang *array = NULL; 1883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 189076ba34aSJunchao Zhang } 190076ba34aSJunchao Zhang 191d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetArrayWrite_SeqAIJKokkos(Mat A, PetscScalar *array[]) 192d71ae5a4SJacob Faibussowitsch { 193076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 194076ba34aSJunchao Zhang 195076ba34aSJunchao Zhang PetscFunctionBegin; 1965519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) { 197076ba34aSJunchao Zhang *array = aijkok->a_dual.view_host().data(); 1982328674fSJunchao Zhang } else { /* Ex. happens with MatZeroEntries on a preallocated but not assembled matrix */ 1992328674fSJunchao Zhang *array = static_cast<Mat_SeqAIJ *>(A->data)->a; 2002328674fSJunchao Zhang } 2013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 202076ba34aSJunchao Zhang } 203076ba34aSJunchao Zhang 204d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJRestoreArrayWrite_SeqAIJKokkos(Mat A, PetscScalar *array[]) 205d71ae5a4SJacob Faibussowitsch { 206076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 207076ba34aSJunchao Zhang 208076ba34aSJunchao Zhang PetscFunctionBegin; 2095519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) { 210076ba34aSJunchao Zhang aijkok->a_dual.clear_sync_state(); 211076ba34aSJunchao Zhang aijkok->a_dual.modify_host(); 2122328674fSJunchao Zhang } 2133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 214f0cf5187SStefano Zampini } 215f0cf5187SStefano Zampini 216d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetCSRAndMemType_SeqAIJKokkos(Mat A, const PetscInt **i, const PetscInt **j, PetscScalar **a, PetscMemType *mtype) 217d71ae5a4SJacob Faibussowitsch { 2187ee59b9bSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 2197ee59b9bSJunchao Zhang 2207ee59b9bSJunchao Zhang PetscFunctionBegin; 2217ee59b9bSJunchao Zhang PetscCheck(aijkok != NULL, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "aijkok is NULL"); 2227ee59b9bSJunchao Zhang 2237ee59b9bSJunchao Zhang if (i) *i = aijkok->i_device_data(); 2247ee59b9bSJunchao Zhang if (j) *j = aijkok->j_device_data(); 2257ee59b9bSJunchao Zhang if (a) { 2267ee59b9bSJunchao Zhang aijkok->a_dual.sync_device(); 2277ee59b9bSJunchao Zhang *a = aijkok->a_device_data(); 2287ee59b9bSJunchao Zhang } 2297ee59b9bSJunchao Zhang if (mtype) *mtype = PETSC_MEMTYPE_KOKKOS; 2303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2317ee59b9bSJunchao Zhang } 2327ee59b9bSJunchao Zhang 2330e3ece09SJunchao Zhang /* 2340e3ece09SJunchao Zhang Generate the sparsity pattern of a MatSeqAIJKokkos matrix's transpose on device. 2350e3ece09SJunchao Zhang 2360e3ece09SJunchao Zhang Input Parameter: 2370e3ece09SJunchao Zhang . A - the MATSEQAIJKOKKOS matrix 2380e3ece09SJunchao Zhang 2390e3ece09SJunchao Zhang Output Parameters: 2400e3ece09SJunchao Zhang + perm_d - the permutation array on device, which connects Ta(i) = Aa(perm(i)) 241aaa8cc7dSPierre Jolivet - T_d - the transpose on device, whose value array is allocated but not initialized 2420e3ece09SJunchao Zhang */ 2430e3ece09SJunchao Zhang static PetscErrorCode MatSeqAIJKokkosGenerateTransposeStructure(Mat A, MatRowMapKokkosView &perm_d, KokkosCsrMatrix &T_d) 244d71ae5a4SJacob Faibussowitsch { 2450e3ece09SJunchao Zhang Mat_SeqAIJ *aseq = static_cast<Mat_SeqAIJ *>(A->data); 2460e3ece09SJunchao Zhang PetscInt nz = aseq->nz, m = A->rmap->N, n = A->cmap->n; 2470e3ece09SJunchao Zhang const PetscInt *Ai = aseq->i, *Aj = aseq->j; 2487b8d4ba6SJunchao Zhang MatRowMapKokkosViewHost Ti_h(NoInit("Ti"), n + 1); 2490e3ece09SJunchao Zhang MatRowMapType *Ti = Ti_h.data(); 2507b8d4ba6SJunchao Zhang MatColIdxKokkosViewHost Tj_h(NoInit("Tj"), nz); 2517b8d4ba6SJunchao Zhang MatRowMapKokkosViewHost perm_h(NoInit("permutation"), nz); 2520e3ece09SJunchao Zhang PetscInt *Tj = Tj_h.data(); 2530e3ece09SJunchao Zhang PetscInt *perm = perm_h.data(); 2540e3ece09SJunchao Zhang PetscInt *offset; 255152b3e56SJunchao Zhang 256152b3e56SJunchao Zhang PetscFunctionBegin; 2570e3ece09SJunchao Zhang // Populate Ti 2580e3ece09SJunchao Zhang PetscCallCXX(Kokkos::deep_copy(Ti_h, 0)); 2590e3ece09SJunchao Zhang Ti++; 2600e3ece09SJunchao Zhang for (PetscInt i = 0; i < nz; i++) Ti[Aj[i]]++; 2610e3ece09SJunchao Zhang Ti--; 2620e3ece09SJunchao Zhang for (PetscInt i = 0; i < n; i++) Ti[i + 1] += Ti[i]; 2630e3ece09SJunchao Zhang 2640e3ece09SJunchao Zhang // Populate Tj and the permutation array 2650e3ece09SJunchao Zhang PetscCall(PetscCalloc1(n, &offset)); // offset in each T row to fill in its column indices 2660e3ece09SJunchao Zhang for (PetscInt i = 0; i < m; i++) { 2670e3ece09SJunchao Zhang for (PetscInt j = Ai[i]; j < Ai[i + 1]; j++) { // A's (i,j) is T's (j,i) 2680e3ece09SJunchao Zhang PetscInt r = Aj[j]; // row r of T 2690e3ece09SJunchao Zhang PetscInt disp = Ti[r] + offset[r]; 2700e3ece09SJunchao Zhang 2710e3ece09SJunchao Zhang Tj[disp] = i; // col i of T 2720e3ece09SJunchao Zhang perm[disp] = j; 2730e3ece09SJunchao Zhang offset[r]++; 274076ba34aSJunchao Zhang } 2750e3ece09SJunchao Zhang } 2760e3ece09SJunchao Zhang PetscCall(PetscFree(offset)); 2770e3ece09SJunchao Zhang 2780e3ece09SJunchao Zhang // Sort each row of T, along with the permutation array 2790e3ece09SJunchao Zhang for (PetscInt i = 0; i < n; i++) PetscCall(PetscSortIntWithArray(Ti[i + 1] - Ti[i], Tj + Ti[i], perm + Ti[i])); 2800e3ece09SJunchao Zhang 2810e3ece09SJunchao Zhang // Output perm and T on device 2820e3ece09SJunchao Zhang auto Ti_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Ti_h); 2830e3ece09SJunchao Zhang auto Tj_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Tj_h); 2840e3ece09SJunchao Zhang PetscCallCXX(T_d = KokkosCsrMatrix("csrmatT", n, m, nz, MatScalarKokkosView("Ta", nz), Ti_d, Tj_d)); 2850e3ece09SJunchao Zhang PetscCallCXX(perm_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), perm_h)); 2863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 287152b3e56SJunchao Zhang } 288152b3e56SJunchao Zhang 2890e3ece09SJunchao Zhang // Generate the transpose on device and cache it internally 2900e3ece09SJunchao Zhang // Note: KK transpose_matrix() does not have support symbolic/numeric transpose, so we do it on our own 2910e3ece09SJunchao Zhang PETSC_INTERN PetscErrorCode MatSeqAIJKokkosGenerateTranspose_Private(Mat A, KokkosCsrMatrix *csrmatT) 292d71ae5a4SJacob Faibussowitsch { 2930e3ece09SJunchao Zhang Mat_SeqAIJ *aseq = static_cast<Mat_SeqAIJ *>(A->data); 2940e3ece09SJunchao Zhang Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 2950e3ece09SJunchao Zhang PetscInt nz = aseq->nz, m = A->rmap->N, n = A->cmap->n; 2960e3ece09SJunchao Zhang KokkosCsrMatrix &T = akok->csrmatT; 297152b3e56SJunchao Zhang 298152b3e56SJunchao Zhang PetscFunctionBegin; 2990e3ece09SJunchao Zhang PetscCheck(akok, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr"); 300145b44c9SPierre Jolivet PetscCallCXX(akok->a_dual.sync_device()); // Sync A's values since we are going to access them on device 3010e3ece09SJunchao Zhang 3020e3ece09SJunchao Zhang const auto &Aa = akok->a_dual.view_device(); 3030e3ece09SJunchao Zhang 3040e3ece09SJunchao Zhang if (A->symmetric == PETSC_BOOL3_TRUE) { 3050e3ece09SJunchao Zhang *csrmatT = akok->csrmat; 3060e3ece09SJunchao Zhang } else { 3070e3ece09SJunchao Zhang // See if we already have a cached transpose and its value is up to date 3080e3ece09SJunchao Zhang if (T.numRows() == n && T.numCols() == m) { // this indicates csrmatT had been generated before, otherwise T has 0 rows/cols after construction 3090e3ece09SJunchao Zhang if (!akok->transpose_updated) { // if the value is out of date, update the cached version 3100e3ece09SJunchao Zhang const auto &perm = akok->transpose_perm; // get the permutation array 3110e3ece09SJunchao Zhang auto &Ta = T.values; 3120e3ece09SJunchao Zhang 313d326c3f1SJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt i) { Ta(i) = Aa(perm(i)); })); 314076ba34aSJunchao Zhang } 3150e3ece09SJunchao Zhang } else { // Generate T of size n x m for the first time 3160e3ece09SJunchao Zhang MatRowMapKokkosView perm; 3170e3ece09SJunchao Zhang 3180e3ece09SJunchao Zhang PetscCall(MatSeqAIJKokkosGenerateTransposeStructure(A, perm, T)); 3190e3ece09SJunchao Zhang akok->transpose_perm = perm; // cache the perm in this matrix for reuse 320d326c3f1SJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt i) { T.values(i) = Aa(perm(i)); })); 3210e3ece09SJunchao Zhang } 3220e3ece09SJunchao Zhang akok->transpose_updated = PETSC_TRUE; 3230e3ece09SJunchao Zhang *csrmatT = akok->csrmatT; 3240e3ece09SJunchao Zhang } 3250e3ece09SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 3260e3ece09SJunchao Zhang } 3270e3ece09SJunchao Zhang 3280e3ece09SJunchao Zhang // Generate the Hermitian on device and cache it internally 3290e3ece09SJunchao Zhang static PetscErrorCode MatSeqAIJKokkosGenerateHermitian_Private(Mat A, KokkosCsrMatrix *csrmatH) 3300e3ece09SJunchao Zhang { 3310e3ece09SJunchao Zhang Mat_SeqAIJ *aseq = static_cast<Mat_SeqAIJ *>(A->data); 3320e3ece09SJunchao Zhang Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 3330e3ece09SJunchao Zhang PetscInt nz = aseq->nz, m = A->rmap->N, n = A->cmap->n; 3340e3ece09SJunchao Zhang KokkosCsrMatrix &T = akok->csrmatH; 3350e3ece09SJunchao Zhang 3360e3ece09SJunchao Zhang PetscFunctionBegin; 3370e3ece09SJunchao Zhang PetscCheck(akok, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr"); 3380e3ece09SJunchao Zhang PetscCallCXX(akok->a_dual.sync_device()); // Sync A's values since we are going to access them on device 3390e3ece09SJunchao Zhang 3400e3ece09SJunchao Zhang const auto &Aa = akok->a_dual.view_device(); 3410e3ece09SJunchao Zhang 3420e3ece09SJunchao Zhang if (A->hermitian == PETSC_BOOL3_TRUE) { 3430e3ece09SJunchao Zhang *csrmatH = akok->csrmat; 3440e3ece09SJunchao Zhang } else { 3450e3ece09SJunchao Zhang // See if we already have a cached hermitian and its value is up to date 3460e3ece09SJunchao Zhang if (T.numRows() == n && T.numCols() == m) { // this indicates csrmatT had been generated before, otherwise T has 0 rows/cols after construction 3470e3ece09SJunchao Zhang if (!akok->hermitian_updated) { // if the value is out of date, update the cached version 3480e3ece09SJunchao Zhang const auto &perm = akok->transpose_perm; // get the permutation array 3490e3ece09SJunchao Zhang auto &Ta = T.values; 3500e3ece09SJunchao Zhang 351d326c3f1SJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt i) { Ta(i) = PetscConj(Aa(perm(i))); })); 3520e3ece09SJunchao Zhang } 3530e3ece09SJunchao Zhang } else { // Generate T of size n x m for the first time 3540e3ece09SJunchao Zhang MatRowMapKokkosView perm; 3550e3ece09SJunchao Zhang 3560e3ece09SJunchao Zhang PetscCall(MatSeqAIJKokkosGenerateTransposeStructure(A, perm, T)); 3570e3ece09SJunchao Zhang akok->transpose_perm = perm; // cache the perm in this matrix for reuse 358d326c3f1SJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt i) { T.values(i) = PetscConj(Aa(perm(i))); })); 3590e3ece09SJunchao Zhang } 3600e3ece09SJunchao Zhang akok->hermitian_updated = PETSC_TRUE; 3610e3ece09SJunchao Zhang *csrmatH = akok->csrmatH; 3620e3ece09SJunchao Zhang } 3633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 364152b3e56SJunchao Zhang } 365a587d139SMark 3668c3ff71bSJunchao Zhang /* y = A x */ 367d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMult_SeqAIJKokkos(Mat A, Vec xx, Vec yy) 368d71ae5a4SJacob Faibussowitsch { 3698c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 370152b3e56SJunchao Zhang ConstPetscScalarKokkosView xv; 371152b3e56SJunchao Zhang PetscScalarKokkosView yv; 3728c3ff71bSJunchao Zhang 3738c3ff71bSJunchao Zhang PetscFunctionBegin; 3749566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 3759566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 3769566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx, &xv)); 3779566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(yy, &yv)); 3788c3ff71bSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 379d326c3f1SJunchao Zhang PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), "N", 1.0 /*alpha*/, aijkok->csrmat, xv, 0.0 /*beta*/, yv)); /* y = alpha A x + beta y */ 3809566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx, &xv)); 3819566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(yy, &yv)); 382076ba34aSJunchao Zhang /* 2.0*nnz - numRows seems more accurate here but assumes there are no zero-rows. So a little sloppy here. */ 3839566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0 * aijkok->csrmat.nnz())); 3849566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 3853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3868c3ff71bSJunchao Zhang } 3878c3ff71bSJunchao Zhang 3888c3ff71bSJunchao Zhang /* y = A^T x */ 389d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultTranspose_SeqAIJKokkos(Mat A, Vec xx, Vec yy) 390d71ae5a4SJacob Faibussowitsch { 3918c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 392152b3e56SJunchao Zhang const char *mode; 393152b3e56SJunchao Zhang ConstPetscScalarKokkosView xv; 394152b3e56SJunchao Zhang PetscScalarKokkosView yv; 3950e3ece09SJunchao Zhang KokkosCsrMatrix csrmat; 3968c3ff71bSJunchao Zhang 3978c3ff71bSJunchao Zhang PetscFunctionBegin; 3989566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 3999566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 4009566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx, &xv)); 4019566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(yy, &yv)); 402152b3e56SJunchao Zhang if (A->form_explicit_transpose) { 4039566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &csrmat)); 404152b3e56SJunchao Zhang mode = "N"; 405152b3e56SJunchao Zhang } else { 406076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 4070e3ece09SJunchao Zhang csrmat = aijkok->csrmat; 408152b3e56SJunchao Zhang mode = "T"; 409152b3e56SJunchao Zhang } 410d326c3f1SJunchao Zhang PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), mode, 1.0 /*alpha*/, csrmat, xv, 0.0 /*beta*/, yv)); /* y = alpha A^T x + beta y */ 4119566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx, &xv)); 4129566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(yy, &yv)); 4130e3ece09SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0 * csrmat.nnz())); 4149566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 4153ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4168c3ff71bSJunchao Zhang } 4178c3ff71bSJunchao Zhang 4188c3ff71bSJunchao Zhang /* y = A^H x */ 419d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultHermitianTranspose_SeqAIJKokkos(Mat A, Vec xx, Vec yy) 420d71ae5a4SJacob Faibussowitsch { 4218c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 422152b3e56SJunchao Zhang const char *mode; 423152b3e56SJunchao Zhang ConstPetscScalarKokkosView xv; 424152b3e56SJunchao Zhang PetscScalarKokkosView yv; 4250e3ece09SJunchao Zhang KokkosCsrMatrix csrmat; 4268c3ff71bSJunchao Zhang 4278c3ff71bSJunchao Zhang PetscFunctionBegin; 4289566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 4299566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 4309566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx, &xv)); 4319566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(yy, &yv)); 432152b3e56SJunchao Zhang if (A->form_explicit_transpose) { 4339566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateHermitian_Private(A, &csrmat)); 434152b3e56SJunchao Zhang mode = "N"; 435152b3e56SJunchao Zhang } else { 436076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 4370e3ece09SJunchao Zhang csrmat = aijkok->csrmat; 438152b3e56SJunchao Zhang mode = "C"; 439152b3e56SJunchao Zhang } 440d326c3f1SJunchao Zhang PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), mode, 1.0 /*alpha*/, csrmat, xv, 0.0 /*beta*/, yv)); /* y = alpha A^H x + beta y */ 4419566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx, &xv)); 4429566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(yy, &yv)); 4430e3ece09SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0 * csrmat.nnz())); 4449566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 4453ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4468c3ff71bSJunchao Zhang } 4478c3ff71bSJunchao Zhang 4488c3ff71bSJunchao Zhang /* z = A x + y */ 449d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultAdd_SeqAIJKokkos(Mat A, Vec xx, Vec yy, Vec zz) 450d71ae5a4SJacob Faibussowitsch { 4518c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 45292896123SJunchao Zhang ConstPetscScalarKokkosView xv; 453152b3e56SJunchao Zhang PetscScalarKokkosView zv; 4548c3ff71bSJunchao Zhang 4558c3ff71bSJunchao Zhang PetscFunctionBegin; 4569566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 4579566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 45892896123SJunchao Zhang if (zz != yy) PetscCall(VecCopy(yy, zz)); // depending on yy's sync flags, zz might get its latest data on host 4599566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx, &xv)); 46092896123SJunchao Zhang PetscCall(VecGetKokkosView(zz, &zv)); // do after VecCopy(yy, zz) to get the latest data on device 4618c3ff71bSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 462d326c3f1SJunchao Zhang PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), "N", 1.0 /*alpha*/, aijkok->csrmat, xv, 1.0 /*beta*/, zv)); /* z = alpha A x + beta z */ 4639566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx, &xv)); 46492896123SJunchao Zhang PetscCall(VecRestoreKokkosView(zz, &zv)); 4659566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0 * aijkok->csrmat.nnz())); 4669566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 4673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4688c3ff71bSJunchao Zhang } 4698c3ff71bSJunchao Zhang 4708c3ff71bSJunchao Zhang /* z = A^T x + y */ 471d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultTransposeAdd_SeqAIJKokkos(Mat A, Vec xx, Vec yy, Vec zz) 472d71ae5a4SJacob Faibussowitsch { 4738c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 474152b3e56SJunchao Zhang const char *mode; 47592896123SJunchao Zhang ConstPetscScalarKokkosView xv; 476152b3e56SJunchao Zhang PetscScalarKokkosView zv; 4770e3ece09SJunchao Zhang KokkosCsrMatrix csrmat; 4788c3ff71bSJunchao Zhang 4798c3ff71bSJunchao Zhang PetscFunctionBegin; 4809566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 4819566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 48292896123SJunchao Zhang if (zz != yy) PetscCall(VecCopy(yy, zz)); 4839566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx, &xv)); 48492896123SJunchao Zhang PetscCall(VecGetKokkosView(zz, &zv)); 485152b3e56SJunchao Zhang if (A->form_explicit_transpose) { 4869566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &csrmat)); 487152b3e56SJunchao Zhang mode = "N"; 488152b3e56SJunchao Zhang } else { 489076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 4900e3ece09SJunchao Zhang csrmat = aijkok->csrmat; 491152b3e56SJunchao Zhang mode = "T"; 492152b3e56SJunchao Zhang } 493d326c3f1SJunchao Zhang PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), mode, 1.0 /*alpha*/, csrmat, xv, 1.0 /*beta*/, zv)); /* z = alpha A^T x + beta z */ 4949566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx, &xv)); 49592896123SJunchao Zhang PetscCall(VecRestoreKokkosView(zz, &zv)); 4960e3ece09SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0 * csrmat.nnz())); 4979566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 4983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4998c3ff71bSJunchao Zhang } 5008c3ff71bSJunchao Zhang 5018c3ff71bSJunchao Zhang /* z = A^H x + y */ 502d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJKokkos(Mat A, Vec xx, Vec yy, Vec zz) 503d71ae5a4SJacob Faibussowitsch { 5048c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 505152b3e56SJunchao Zhang const char *mode; 50692896123SJunchao Zhang ConstPetscScalarKokkosView xv; 507152b3e56SJunchao Zhang PetscScalarKokkosView zv; 5080e3ece09SJunchao Zhang KokkosCsrMatrix csrmat; 5098c3ff71bSJunchao Zhang 5108c3ff71bSJunchao Zhang PetscFunctionBegin; 5119566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 5129566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 51392896123SJunchao Zhang if (zz != yy) PetscCall(VecCopy(yy, zz)); 5149566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx, &xv)); 51592896123SJunchao Zhang PetscCall(VecGetKokkosView(zz, &zv)); 516152b3e56SJunchao Zhang if (A->form_explicit_transpose) { 5179566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateHermitian_Private(A, &csrmat)); 518152b3e56SJunchao Zhang mode = "N"; 519152b3e56SJunchao Zhang } else { 520076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 5210e3ece09SJunchao Zhang csrmat = aijkok->csrmat; 522152b3e56SJunchao Zhang mode = "C"; 523152b3e56SJunchao Zhang } 524d326c3f1SJunchao Zhang PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), mode, 1.0 /*alpha*/, csrmat, xv, 1.0 /*beta*/, zv)); /* z = alpha A^H x + beta z */ 5259566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx, &xv)); 52692896123SJunchao Zhang PetscCall(VecRestoreKokkosView(zz, &zv)); 5270e3ece09SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0 * csrmat.nnz())); 5289566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 5293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 530152b3e56SJunchao Zhang } 531152b3e56SJunchao Zhang 53266976f2fSJacob Faibussowitsch static PetscErrorCode MatSetOption_SeqAIJKokkos(Mat A, MatOption op, PetscBool flg) 533d71ae5a4SJacob Faibussowitsch { 534152b3e56SJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 535152b3e56SJunchao Zhang 536152b3e56SJunchao Zhang PetscFunctionBegin; 537152b3e56SJunchao Zhang switch (op) { 538152b3e56SJunchao Zhang case MAT_FORM_EXPLICIT_TRANSPOSE: 539152b3e56SJunchao Zhang /* need to destroy the transpose matrix if present to prevent from logic errors if flg is set to true later */ 5409566063dSJacob Faibussowitsch if (A->form_explicit_transpose && !flg && aijkok) PetscCall(aijkok->DestroyMatTranspose()); 541152b3e56SJunchao Zhang A->form_explicit_transpose = flg; 542152b3e56SJunchao Zhang break; 543d71ae5a4SJacob Faibussowitsch default: 544d71ae5a4SJacob Faibussowitsch PetscCall(MatSetOption_SeqAIJ(A, op, flg)); 545d71ae5a4SJacob Faibussowitsch break; 546152b3e56SJunchao Zhang } 5473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5488c3ff71bSJunchao Zhang } 5498c3ff71bSJunchao Zhang 550076ba34aSJunchao Zhang /* Depending on reuse, either build a new mat, or use the existing mat */ 551d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJKokkos(Mat A, MatType mtype, MatReuse reuse, Mat *newmat) 552d71ae5a4SJacob Faibussowitsch { 553076ba34aSJunchao Zhang Mat_SeqAIJ *aseq; 5548c3ff71bSJunchao Zhang 5558c3ff71bSJunchao Zhang PetscFunctionBegin; 5569566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 557076ba34aSJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { /* Build a brand new mat */ 558*51ece73cSJunchao Zhang PetscCall(MatDuplicate(A, MAT_COPY_VALUES, newmat)); 559*51ece73cSJunchao Zhang PetscCall(MatSetType(*newmat, mtype)); 5608c3ff71bSJunchao Zhang } else if (reuse == MAT_REUSE_MATRIX) { /* Reuse the mat created before */ 5619566063dSJacob Faibussowitsch PetscCall(MatCopy(A, *newmat, SAME_NONZERO_PATTERN)); /* newmat is already a SeqAIJKokkos */ 562076ba34aSJunchao Zhang } else if (reuse == MAT_INPLACE_MATRIX) { /* newmat is A */ 5635f80ce2aSJacob Faibussowitsch PetscCheck(A == *newmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "A != *newmat with MAT_INPLACE_MATRIX"); 5649566063dSJacob Faibussowitsch PetscCall(PetscFree(A->defaultvectype)); 5659566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(VECKOKKOS, &A->defaultvectype)); /* Allocate and copy the string */ 5669566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)A, MATSEQAIJKOKKOS)); 5679566063dSJacob Faibussowitsch PetscCall(MatSetOps_SeqAIJKokkos(A)); 568076ba34aSJunchao Zhang aseq = static_cast<Mat_SeqAIJ *>(A->data); 569394ed5ebSJunchao Zhang if (A->assembled) { /* Copy i, j (but not values) to device for an assembled matrix if not yet */ 5705f80ce2aSJacob Faibussowitsch PetscCheck(!A->spptr, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "Expect NULL (Mat_SeqAIJKokkos*)A->spptr"); 571f4747e26SJunchao Zhang A->spptr = new Mat_SeqAIJKokkos(A->rmap->n, A->cmap->n, aseq, A->nonzerostate, PETSC_FALSE); 5728c3ff71bSJunchao Zhang } 573076ba34aSJunchao Zhang } 5743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5758c3ff71bSJunchao Zhang } 5768c3ff71bSJunchao Zhang 577076ba34aSJunchao Zhang /* MatDuplicate always creates a new matrix. MatDuplicate can be called either on an assembled matrix or 578076ba34aSJunchao Zhang an unassembled matrix, even though MAT_COPY_VALUES is not allowed for unassembled matrix. 579076ba34aSJunchao Zhang */ 580d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDuplicate_SeqAIJKokkos(Mat A, MatDuplicateOption dupOption, Mat *B) 581d71ae5a4SJacob Faibussowitsch { 582076ba34aSJunchao Zhang Mat_SeqAIJ *bseq; 583076ba34aSJunchao Zhang Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr), *bkok; 584076ba34aSJunchao Zhang Mat mat; 5858c3ff71bSJunchao Zhang 5868c3ff71bSJunchao Zhang PetscFunctionBegin; 587076ba34aSJunchao Zhang /* Do not copy values on host as A's latest values might be on device. We don't want to do sync blindly */ 5889566063dSJacob Faibussowitsch PetscCall(MatDuplicate_SeqAIJ(A, MAT_DO_NOT_COPY_VALUES, B)); 589076ba34aSJunchao Zhang mat = *B; 590f4747e26SJunchao Zhang if (A->assembled) { 591076ba34aSJunchao Zhang bseq = static_cast<Mat_SeqAIJ *>(mat->data); 592f4747e26SJunchao Zhang bkok = new Mat_SeqAIJKokkos(mat->rmap->n, mat->cmap->n, bseq, mat->nonzerostate, PETSC_FALSE); 593076ba34aSJunchao Zhang bkok->a_dual.clear_sync_state(); /* Clear B's sync state as it will be decided below */ 594076ba34aSJunchao Zhang /* Now copy values to B if needed */ 595076ba34aSJunchao Zhang if (dupOption == MAT_COPY_VALUES) { 596076ba34aSJunchao Zhang if (akok->a_dual.need_sync_device()) { 597076ba34aSJunchao Zhang Kokkos::deep_copy(bkok->a_dual.view_host(), akok->a_dual.view_host()); 598076ba34aSJunchao Zhang bkok->a_dual.modify_host(); 599076ba34aSJunchao Zhang } else { /* If device has the latest data, we only copy data on device */ 600076ba34aSJunchao Zhang Kokkos::deep_copy(bkok->a_dual.view_device(), akok->a_dual.view_device()); 601076ba34aSJunchao Zhang bkok->a_dual.modify_device(); 602076ba34aSJunchao Zhang } 603076ba34aSJunchao Zhang } else { /* MAT_DO_NOT_COPY_VALUES or MAT_SHARE_NONZERO_PATTERN. B's values should be zeroed */ 604076ba34aSJunchao Zhang /* B's values on host should be already zeroed by MatDuplicate_SeqAIJ() */ 605076ba34aSJunchao Zhang bkok->a_dual.modify_host(); 606076ba34aSJunchao Zhang } 607076ba34aSJunchao Zhang mat->spptr = bkok; 608076ba34aSJunchao Zhang } 609076ba34aSJunchao Zhang 6109566063dSJacob Faibussowitsch PetscCall(PetscFree(mat->defaultvectype)); 6119566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(VECKOKKOS, &mat->defaultvectype)); /* Allocate and copy the string */ 6129566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATSEQAIJKOKKOS)); 6139566063dSJacob Faibussowitsch PetscCall(MatSetOps_SeqAIJKokkos(mat)); 6143ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6158c3ff71bSJunchao Zhang } 6168c3ff71bSJunchao Zhang 617d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTranspose_SeqAIJKokkos(Mat A, MatReuse reuse, Mat *B) 618d71ae5a4SJacob Faibussowitsch { 6190ecb592aSJunchao Zhang Mat At; 6200e3ece09SJunchao Zhang KokkosCsrMatrix internT; 6210ecb592aSJunchao Zhang Mat_SeqAIJKokkos *atkok, *bkok; 6220ecb592aSJunchao Zhang 6230ecb592aSJunchao Zhang PetscFunctionBegin; 6247fb60732SBarry Smith if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *B)); 6259566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &internT)); /* Generate a transpose internally */ 6260ecb592aSJunchao Zhang if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { 627ff751488SJunchao Zhang /* Deep copy internT, as we want to isolate the internal transpose */ 6280e3ece09SJunchao Zhang PetscCallCXX(atkok = new Mat_SeqAIJKokkos(KokkosCsrMatrix("csrmat", internT))); 6299566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PetscObjectComm((PetscObject)A), atkok, &At)); 6300ecb592aSJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) *B = At; 6319566063dSJacob Faibussowitsch else PetscCall(MatHeaderReplace(A, &At)); /* Replace A with At inplace */ 6320ecb592aSJunchao Zhang } else { /* MAT_REUSE_MATRIX, just need to copy values to B on device */ 6330ecb592aSJunchao Zhang if ((*B)->assembled) { 6340ecb592aSJunchao Zhang bkok = static_cast<Mat_SeqAIJKokkos *>((*B)->spptr); 6350e3ece09SJunchao Zhang PetscCallCXX(Kokkos::deep_copy(bkok->a_dual.view_device(), internT.values)); 6369566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(*B)); 6370ecb592aSJunchao Zhang } else if ((*B)->preallocated) { /* It is ok for B to be only preallocated, as needed in MatTranspose_MPIAIJ */ 6380ecb592aSJunchao Zhang Mat_SeqAIJ *bseq = static_cast<Mat_SeqAIJ *>((*B)->data); 6390e3ece09SJunchao Zhang MatScalarKokkosViewHost a_h(bseq->a, internT.nnz()); /* bseq->nz = 0 if unassembled */ 6400e3ece09SJunchao Zhang MatColIdxKokkosViewHost j_h(bseq->j, internT.nnz()); 6410e3ece09SJunchao Zhang PetscCallCXX(Kokkos::deep_copy(a_h, internT.values)); 6420e3ece09SJunchao Zhang PetscCallCXX(Kokkos::deep_copy(j_h, internT.graph.entries)); 6430ecb592aSJunchao Zhang } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "B must be assembled or preallocated"); 6440ecb592aSJunchao Zhang } 6453ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6460ecb592aSJunchao Zhang } 6470ecb592aSJunchao Zhang 648d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDestroy_SeqAIJKokkos(Mat A) 649d71ae5a4SJacob Faibussowitsch { 65086a27549SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 6518c3ff71bSJunchao Zhang 6528c3ff71bSJunchao Zhang PetscFunctionBegin; 65386a27549SJunchao Zhang if (A->factortype == MAT_FACTOR_NONE) { 65486a27549SJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 6558c3ff71bSJunchao Zhang delete aijkok; 65686a27549SJunchao Zhang } else { 65786a27549SJunchao Zhang delete static_cast<Mat_SeqAIJKokkosTriFactors *>(A->spptr); 65886a27549SJunchao Zhang } 659cbc6b225SStefano Zampini A->spptr = NULL; 6609566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatFactorGetSolverType_C", NULL)); 6619566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetPreallocationCOO_C", NULL)); 6629566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetValuesCOO_C", NULL)); 66357761e9aSJunchao Zhang #if defined(PETSC_HAVE_HYPRE) 66457761e9aSJunchao Zhang PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatConvert_seqaijkokkos_hypre_C", NULL)); 66557761e9aSJunchao Zhang #endif 6669566063dSJacob Faibussowitsch PetscCall(MatDestroy_SeqAIJ(A)); 6673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6688c3ff71bSJunchao Zhang } 6698c3ff71bSJunchao Zhang 6703f3ba80aSJunchao Zhang /*MC 6713f3ba80aSJunchao Zhang MATSEQAIJKOKKOS - MATAIJKOKKOS = "(seq)aijkokkos" - A matrix type to be used for sparse matrices with Kokkos 6723f3ba80aSJunchao Zhang 67315229ffcSPierre Jolivet A matrix type using Kokkos-Kernels CrsMatrix type for portability across different device types 6743f3ba80aSJunchao Zhang 6752ef1f0ffSBarry Smith Options Database Key: 67611a5261eSBarry Smith . -mat_type aijkokkos - sets the matrix type to `MATSEQAIJKOKKOS` during a call to `MatSetFromOptions()` 6773f3ba80aSJunchao Zhang 6783f3ba80aSJunchao Zhang Level: beginner 6793f3ba80aSJunchao Zhang 6801cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreateSeqAIJKokkos()`, `MATMPIAIJKOKKOS` 6813f3ba80aSJunchao Zhang M*/ 682d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatCreate_SeqAIJKokkos(Mat A) 683d71ae5a4SJacob Faibussowitsch { 68486a27549SJunchao Zhang PetscFunctionBegin; 6859566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 6869566063dSJacob Faibussowitsch PetscCall(MatCreate_SeqAIJ(A)); 6879566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqAIJKokkos(A, MATSEQAIJKOKKOS, MAT_INPLACE_MATRIX, &A)); 6883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 68986a27549SJunchao Zhang } 69086a27549SJunchao Zhang 691076ba34aSJunchao Zhang /* Merge A, B into a matrix C. A is put before B. C's size would be A->rmap->n by (A->cmap->n + B->cmap->n) */ 692d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJKokkosMergeMats(Mat A, Mat B, MatReuse reuse, Mat *C) 693d71ae5a4SJacob Faibussowitsch { 694076ba34aSJunchao Zhang Mat_SeqAIJ *a, *b; 695076ba34aSJunchao Zhang Mat_SeqAIJKokkos *akok, *bkok, *ckok; 696076ba34aSJunchao Zhang MatScalarKokkosView aa, ba, ca; 697076ba34aSJunchao Zhang MatRowMapKokkosView ai, bi, ci; 698076ba34aSJunchao Zhang MatColIdxKokkosView aj, bj, cj; 699076ba34aSJunchao Zhang PetscInt m, n, nnz, aN; 700a3f881fbSStefano Zampini 701a3f881fbSStefano Zampini PetscFunctionBegin; 702076ba34aSJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 703076ba34aSJunchao Zhang PetscValidHeaderSpecific(B, MAT_CLASSID, 2); 7044f572ea9SToby Isaac PetscAssertPointer(C, 4); 705076ba34aSJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 706076ba34aSJunchao Zhang PetscCheckTypeName(B, MATSEQAIJKOKKOS); 7075f80ce2aSJacob Faibussowitsch PetscCheck(A->rmap->n == B->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Invalid number or rows %" PetscInt_FMT " != %" PetscInt_FMT, A->rmap->n, B->rmap->n); 7085f80ce2aSJacob Faibussowitsch PetscCheck(reuse != MAT_INPLACE_MATRIX, PETSC_COMM_SELF, PETSC_ERR_SUP, "MAT_INPLACE_MATRIX not supported"); 709076ba34aSJunchao Zhang 7109566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 7119566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(B)); 712076ba34aSJunchao Zhang a = static_cast<Mat_SeqAIJ *>(A->data); 713076ba34aSJunchao Zhang b = static_cast<Mat_SeqAIJ *>(B->data); 714076ba34aSJunchao Zhang akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 715076ba34aSJunchao Zhang bkok = static_cast<Mat_SeqAIJKokkos *>(B->spptr); 716076ba34aSJunchao Zhang aa = akok->a_dual.view_device(); 717076ba34aSJunchao Zhang ai = akok->i_dual.view_device(); 718076ba34aSJunchao Zhang ba = bkok->a_dual.view_device(); 719076ba34aSJunchao Zhang bi = bkok->i_dual.view_device(); 720076ba34aSJunchao Zhang m = A->rmap->n; /* M, N and nnz of C */ 721076ba34aSJunchao Zhang n = A->cmap->n + B->cmap->n; 722076ba34aSJunchao Zhang nnz = a->nz + b->nz; 723076ba34aSJunchao Zhang aN = A->cmap->n; /* N of A */ 724076ba34aSJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { 725076ba34aSJunchao Zhang aj = akok->j_dual.view_device(); 726076ba34aSJunchao Zhang bj = bkok->j_dual.view_device(); 727076ba34aSJunchao Zhang auto ca_dual = MatScalarKokkosDualView("a", aa.extent(0) + ba.extent(0)); 728076ba34aSJunchao Zhang auto ci_dual = MatRowMapKokkosDualView("i", ai.extent(0)); 729076ba34aSJunchao Zhang auto cj_dual = MatColIdxKokkosDualView("j", aj.extent(0) + bj.extent(0)); 730076ba34aSJunchao Zhang ca = ca_dual.view_device(); 731076ba34aSJunchao Zhang ci = ci_dual.view_device(); 732076ba34aSJunchao Zhang cj = cj_dual.view_device(); 733076ba34aSJunchao Zhang 734076ba34aSJunchao Zhang /* Concatenate A and B in parallel using Kokkos hierarchical parallelism */ 7359371c9d4SSatish Balay Kokkos::parallel_for( 736d326c3f1SJunchao Zhang Kokkos::TeamPolicy<>(PetscGetKokkosExecutionSpace(), m, Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 737076ba34aSJunchao Zhang PetscInt i = t.league_rank(); /* row i */ 738076ba34aSJunchao Zhang PetscInt coffset = ai(i) + bi(i), alen = ai(i + 1) - ai(i), blen = bi(i + 1) - bi(i); 739076ba34aSJunchao Zhang 740076ba34aSJunchao Zhang Kokkos::single(Kokkos::PerTeam(t), [=]() { /* this side effect only happens once per whole team */ 741076ba34aSJunchao Zhang ci(i) = coffset; 742076ba34aSJunchao Zhang if (i == m - 1) ci(m) = ai(m) + bi(m); 743076ba34aSJunchao Zhang }); 744076ba34aSJunchao Zhang 745076ba34aSJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(t, alen + blen), [&](PetscInt k) { 746076ba34aSJunchao Zhang if (k < alen) { 747076ba34aSJunchao Zhang ca(coffset + k) = aa(ai(i) + k); 748076ba34aSJunchao Zhang cj(coffset + k) = aj(ai(i) + k); 749076ba34aSJunchao Zhang } else { 750076ba34aSJunchao Zhang ca(coffset + k) = ba(bi(i) + k - alen); 751076ba34aSJunchao Zhang cj(coffset + k) = bj(bi(i) + k - alen) + aN; /* Entries in B get new column indices in C */ 752076ba34aSJunchao Zhang } 753076ba34aSJunchao Zhang }); 754076ba34aSJunchao Zhang }); 755076ba34aSJunchao Zhang ca_dual.modify_device(); 756076ba34aSJunchao Zhang ci_dual.modify_device(); 757076ba34aSJunchao Zhang cj_dual.modify_device(); 7589566063dSJacob Faibussowitsch PetscCallCXX(ckok = new Mat_SeqAIJKokkos(m, n, nnz, ci_dual, cj_dual, ca_dual)); 7599566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF, ckok, C)); 760076ba34aSJunchao Zhang } else if (reuse == MAT_REUSE_MATRIX) { 761076ba34aSJunchao Zhang PetscValidHeaderSpecific(*C, MAT_CLASSID, 4); 762076ba34aSJunchao Zhang PetscCheckTypeName(*C, MATSEQAIJKOKKOS); 763076ba34aSJunchao Zhang ckok = static_cast<Mat_SeqAIJKokkos *>((*C)->spptr); 764076ba34aSJunchao Zhang ca = ckok->a_dual.view_device(); 765076ba34aSJunchao Zhang ci = ckok->i_dual.view_device(); 766076ba34aSJunchao Zhang 7679371c9d4SSatish Balay Kokkos::parallel_for( 768d326c3f1SJunchao Zhang Kokkos::TeamPolicy<>(PetscGetKokkosExecutionSpace(), m, Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 769076ba34aSJunchao Zhang PetscInt i = t.league_rank(); /* row i */ 770076ba34aSJunchao Zhang PetscInt alen = ai(i + 1) - ai(i), blen = bi(i + 1) - bi(i); 771076ba34aSJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(t, alen + blen), [&](PetscInt k) { 772076ba34aSJunchao Zhang if (k < alen) ca(ci(i) + k) = aa(ai(i) + k); 773076ba34aSJunchao Zhang else ca(ci(i) + k) = ba(bi(i) + k - alen); 774076ba34aSJunchao Zhang }); 775076ba34aSJunchao Zhang }); 7769566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(*C)); 777076ba34aSJunchao Zhang } 7783ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 779076ba34aSJunchao Zhang } 780076ba34aSJunchao Zhang 781d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductDataDestroy_SeqAIJKokkos(void *pdata) 782d71ae5a4SJacob Faibussowitsch { 783076ba34aSJunchao Zhang PetscFunctionBegin; 784076ba34aSJunchao Zhang delete static_cast<MatProductData_SeqAIJKokkos *>(pdata); 7853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 786a3f881fbSStefano Zampini } 787a3f881fbSStefano Zampini 788d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductNumeric_SeqAIJKokkos_SeqAIJKokkos(Mat C) 789d71ae5a4SJacob Faibussowitsch { 790a3f881fbSStefano Zampini Mat_Product *product = C->product; 791a3f881fbSStefano Zampini Mat A, B; 792076ba34aSJunchao Zhang bool transA, transB; /* use bool, since KK needs this type */ 793a3f881fbSStefano Zampini Mat_SeqAIJKokkos *akok, *bkok, *ckok; 794a3f881fbSStefano Zampini Mat_SeqAIJ *c; 795076ba34aSJunchao Zhang MatProductData_SeqAIJKokkos *pdata; 7960e3ece09SJunchao Zhang KokkosCsrMatrix csrmatA, csrmatB; 797a3f881fbSStefano Zampini 798a3f881fbSStefano Zampini PetscFunctionBegin; 799a3f881fbSStefano Zampini MatCheckProduct(C, 1); 8005f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 801076ba34aSJunchao Zhang pdata = static_cast<MatProductData_SeqAIJKokkos *>(C->product->data); 802076ba34aSJunchao Zhang 8030e3ece09SJunchao Zhang // See if numeric has already been done in symbolic (e.g., user calls MatMatMult(A,B,MAT_INITIAL_MATRIX,..,C)). 8040e3ece09SJunchao Zhang // If yes, skip the numeric, but reset the flag so that next time when user calls MatMatMult(E,F,MAT_REUSE_MATRIX,..,C), 8050e3ece09SJunchao Zhang // we still do numeric. 8060e3ece09SJunchao Zhang if (pdata->reusesym) { // numeric reuses results from symbolic 8070e3ece09SJunchao Zhang pdata->reusesym = PETSC_FALSE; 8083ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 809076ba34aSJunchao Zhang } 810076ba34aSJunchao Zhang 811076ba34aSJunchao Zhang switch (product->type) { 8129371c9d4SSatish Balay case MATPRODUCT_AB: 8139371c9d4SSatish Balay transA = false; 8149371c9d4SSatish Balay transB = false; 8159371c9d4SSatish Balay break; 8169371c9d4SSatish Balay case MATPRODUCT_AtB: 8179371c9d4SSatish Balay transA = true; 8189371c9d4SSatish Balay transB = false; 8199371c9d4SSatish Balay break; 8209371c9d4SSatish Balay case MATPRODUCT_ABt: 8219371c9d4SSatish Balay transA = false; 8229371c9d4SSatish Balay transB = true; 8239371c9d4SSatish Balay break; 824d71ae5a4SJacob Faibussowitsch default: 825d71ae5a4SJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Unsupported product type %s", MatProductTypes[product->type]); 826076ba34aSJunchao Zhang } 827076ba34aSJunchao Zhang 828a3f881fbSStefano Zampini A = product->A; 829a3f881fbSStefano Zampini B = product->B; 8309566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 8319566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(B)); 832a3f881fbSStefano Zampini akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 833a3f881fbSStefano Zampini bkok = static_cast<Mat_SeqAIJKokkos *>(B->spptr); 834a3f881fbSStefano Zampini ckok = static_cast<Mat_SeqAIJKokkos *>(C->spptr); 835076ba34aSJunchao Zhang 8365f80ce2aSJacob Faibussowitsch PetscCheck(ckok, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Device data structure spptr is empty"); 837076ba34aSJunchao Zhang 8380e3ece09SJunchao Zhang csrmatA = akok->csrmat; 8390e3ece09SJunchao Zhang csrmatB = bkok->csrmat; 840076ba34aSJunchao Zhang 841076ba34aSJunchao Zhang /* TODO: Once KK spgemm implements transpose, we can get rid of the explicit transpose here */ 842076ba34aSJunchao Zhang if (transA) { 8439566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &csrmatA)); 844076ba34aSJunchao Zhang transA = false; 845a3f881fbSStefano Zampini } 846a3f881fbSStefano Zampini 847076ba34aSJunchao Zhang if (transB) { 8489566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(B, &csrmatB)); 849076ba34aSJunchao Zhang transB = false; 850076ba34aSJunchao Zhang } 8519566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 8520e3ece09SJunchao Zhang PetscCallCXX(KokkosSparse::spgemm_numeric(pdata->kh, csrmatA, transA, csrmatB, transB, ckok->csrmat)); 8530e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_LT(4, 0, 0) 854866eb059SJunchao Zhang auto spgemmHandle = pdata->kh.get_spgemm_handle(); 855866eb059SJunchao Zhang if (spgemmHandle->get_sort_option() != 1) PetscCallCXX(sort_crs_matrix(ckok->csrmat)); /* without sort, mat_tests-ex62_14_seqaijkokkos fails */ 856e944a159SJunchao Zhang #endif 857866eb059SJunchao Zhang 8589566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 8599566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(C)); 860a3f881fbSStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 861a3f881fbSStefano Zampini c = (Mat_SeqAIJ *)C->data; 8629566063dSJacob Faibussowitsch PetscCall(PetscInfo(C, "Matrix size: %" PetscInt_FMT " X %" PetscInt_FMT "; storage space: 0 unneeded,%" PetscInt_FMT " used\n", C->rmap->n, C->cmap->n, c->nz)); 8639566063dSJacob Faibussowitsch PetscCall(PetscInfo(C, "Number of mallocs during MatSetValues() is 0\n")); 8649566063dSJacob Faibussowitsch PetscCall(PetscInfo(C, "Maximum nonzeros in any row is %" PetscInt_FMT "\n", c->rmax)); 865a3f881fbSStefano Zampini c->reallocs = 0; 866076ba34aSJunchao Zhang C->info.mallocs = 0; 867a3f881fbSStefano Zampini C->info.nz_unneeded = 0; 868a3f881fbSStefano Zampini C->assembled = C->was_assembled = PETSC_TRUE; 869a3f881fbSStefano Zampini C->num_ass++; 8703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 871a3f881fbSStefano Zampini } 872a3f881fbSStefano Zampini 873d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSymbolic_SeqAIJKokkos_SeqAIJKokkos(Mat C) 874d71ae5a4SJacob Faibussowitsch { 875076ba34aSJunchao Zhang Mat_Product *product = C->product; 876076ba34aSJunchao Zhang MatProductType ptype; 877076ba34aSJunchao Zhang Mat A, B; 878076ba34aSJunchao Zhang bool transA, transB; 879076ba34aSJunchao Zhang Mat_SeqAIJKokkos *akok, *bkok, *ckok; 880076ba34aSJunchao Zhang MatProductData_SeqAIJKokkos *pdata; 881076ba34aSJunchao Zhang MPI_Comm comm; 8820e3ece09SJunchao Zhang KokkosCsrMatrix csrmatA, csrmatB, csrmatC; 883a3f881fbSStefano Zampini 884a3f881fbSStefano Zampini PetscFunctionBegin; 885a3f881fbSStefano Zampini MatCheckProduct(C, 1); 8869566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 8875f80ce2aSJacob Faibussowitsch PetscCheck(!product->data, comm, PETSC_ERR_PLIB, "Product data not empty"); 888a3f881fbSStefano Zampini A = product->A; 889a3f881fbSStefano Zampini B = product->B; 8909566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 8919566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(B)); 892a3f881fbSStefano Zampini akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 893a3f881fbSStefano Zampini bkok = static_cast<Mat_SeqAIJKokkos *>(B->spptr); 8940e3ece09SJunchao Zhang csrmatA = akok->csrmat; 8950e3ece09SJunchao Zhang csrmatB = bkok->csrmat; 896076ba34aSJunchao Zhang 897a3f881fbSStefano Zampini ptype = product->type; 8980e3ece09SJunchao Zhang // Take advantage of the symmetry if true 8990e3ece09SJunchao Zhang if (A->symmetric == PETSC_BOOL3_TRUE && ptype == MATPRODUCT_AtB) { 9000e3ece09SJunchao Zhang ptype = MATPRODUCT_AB; 9010e3ece09SJunchao Zhang product->symbolic_used_the_fact_A_is_symmetric = PETSC_TRUE; 9020e3ece09SJunchao Zhang } 9030e3ece09SJunchao Zhang if (B->symmetric == PETSC_BOOL3_TRUE && ptype == MATPRODUCT_ABt) { 9040e3ece09SJunchao Zhang ptype = MATPRODUCT_AB; 9050e3ece09SJunchao Zhang product->symbolic_used_the_fact_B_is_symmetric = PETSC_TRUE; 9060e3ece09SJunchao Zhang } 9070e3ece09SJunchao Zhang 908a3f881fbSStefano Zampini switch (ptype) { 9099371c9d4SSatish Balay case MATPRODUCT_AB: 9109371c9d4SSatish Balay transA = false; 9119371c9d4SSatish Balay transB = false; 9120e6a1e94SMark Adams PetscCall(MatSetBlockSizesFromMats(C, A, B)); 9139371c9d4SSatish Balay break; 9149371c9d4SSatish Balay case MATPRODUCT_AtB: 9159371c9d4SSatish Balay transA = true; 9169371c9d4SSatish Balay transB = false; 9170e6a1e94SMark Adams if (A->cmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(C->rmap, A->cmap->bs)); 9180e6a1e94SMark Adams if (B->cmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(C->cmap, B->cmap->bs)); 9199371c9d4SSatish Balay break; 9209371c9d4SSatish Balay case MATPRODUCT_ABt: 9219371c9d4SSatish Balay transA = false; 9229371c9d4SSatish Balay transB = true; 9230e6a1e94SMark Adams if (A->rmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(C->rmap, A->rmap->bs)); 9240e6a1e94SMark Adams if (B->rmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(C->cmap, B->rmap->bs)); 9259371c9d4SSatish Balay break; 926d71ae5a4SJacob Faibussowitsch default: 927d71ae5a4SJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_PLIB, "Unsupported product type %s", MatProductTypes[product->type]); 928a3f881fbSStefano Zampini } 9290e3ece09SJunchao Zhang PetscCallCXX(product->data = pdata = new MatProductData_SeqAIJKokkos()); 930076ba34aSJunchao Zhang pdata->reusesym = product->api_user; 931a3f881fbSStefano Zampini 932076ba34aSJunchao Zhang /* TODO: add command line options to select spgemm algorithms */ 933866eb059SJunchao Zhang auto spgemm_alg = KokkosSparse::SPGEMMAlgorithm::SPGEMM_DEFAULT; /* default alg is TPL if enabled, otherwise KK */ 934866eb059SJunchao Zhang 935866eb059SJunchao Zhang /* CUDA-10.2's spgemm has bugs. We prefer the SpGEMMreuse APIs introduced in cuda-11.4 */ 936866eb059SJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE) 937866eb059SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_LT(11, 4, 0) 938866eb059SJunchao Zhang spgemm_alg = KokkosSparse::SPGEMMAlgorithm::SPGEMM_KK; 939866eb059SJunchao Zhang #endif 940866eb059SJunchao Zhang #endif 9410e3ece09SJunchao Zhang PetscCallCXX(pdata->kh.create_spgemm_handle(spgemm_alg)); 942076ba34aSJunchao Zhang 9439566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 944076ba34aSJunchao Zhang /* TODO: Get rid of the explicit transpose once KK-spgemm implements the transpose option */ 945076ba34aSJunchao Zhang if (transA) { 9469566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &csrmatA)); 947076ba34aSJunchao Zhang transA = false; 948076ba34aSJunchao Zhang } 949076ba34aSJunchao Zhang 950076ba34aSJunchao Zhang if (transB) { 9519566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(B, &csrmatB)); 952076ba34aSJunchao Zhang transB = false; 953076ba34aSJunchao Zhang } 954076ba34aSJunchao Zhang 9550e3ece09SJunchao Zhang PetscCallCXX(KokkosSparse::spgemm_symbolic(pdata->kh, csrmatA, transA, csrmatB, transB, csrmatC)); 956076ba34aSJunchao Zhang /* spgemm_symbolic() only populates C's rowmap, but not C's column indices. 957076ba34aSJunchao Zhang So we have to do a fake spgemm_numeric() here to get csrmatC.j_d setup, before 958076ba34aSJunchao Zhang calling new Mat_SeqAIJKokkos(). 959076ba34aSJunchao Zhang TODO: Remove the fake spgemm_numeric() after KK fixed this problem. 960076ba34aSJunchao Zhang */ 9610e3ece09SJunchao Zhang PetscCallCXX(KokkosSparse::spgemm_numeric(pdata->kh, csrmatA, transA, csrmatB, transB, csrmatC)); 9620e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_LT(4, 0, 0) 963866eb059SJunchao Zhang /* Query if KK outputs a sorted matrix. If not, we need to sort it */ 964866eb059SJunchao Zhang auto spgemmHandle = pdata->kh.get_spgemm_handle(); 965866eb059SJunchao Zhang if (spgemmHandle->get_sort_option() != 1) PetscCallCXX(sort_crs_matrix(csrmatC)); /* sort_option defaults to -1 in KK!*/ 966e944a159SJunchao Zhang #endif 9679566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 968076ba34aSJunchao Zhang 9699566063dSJacob Faibussowitsch PetscCallCXX(ckok = new Mat_SeqAIJKokkos(csrmatC)); 9709566063dSJacob Faibussowitsch PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(C, ckok)); 971076ba34aSJunchao Zhang C->product->destroy = MatProductDataDestroy_SeqAIJKokkos; 9723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 973a3f881fbSStefano Zampini } 974a3f881fbSStefano Zampini 975a3f881fbSStefano Zampini /* handles sparse matrix matrix ops */ 976d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_SeqAIJKokkos(Mat mat) 977d71ae5a4SJacob Faibussowitsch { 978076ba34aSJunchao Zhang Mat_Product *product = mat->product; 979a3f881fbSStefano Zampini PetscBool Biskok = PETSC_FALSE, Ciskok = PETSC_TRUE; 980a3f881fbSStefano Zampini 981a3f881fbSStefano Zampini PetscFunctionBegin; 982a3f881fbSStefano Zampini MatCheckProduct(mat, 1); 9839566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)product->B, MATSEQAIJKOKKOS, &Biskok)); 98448a46eb9SPierre Jolivet if (product->type == MATPRODUCT_ABC) PetscCall(PetscObjectTypeCompare((PetscObject)product->C, MATSEQAIJKOKKOS, &Ciskok)); 985a3f881fbSStefano Zampini if (Biskok && Ciskok) { 986a3f881fbSStefano Zampini switch (product->type) { 987a3f881fbSStefano Zampini case MATPRODUCT_AB: 988a3f881fbSStefano Zampini case MATPRODUCT_AtB: 989d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABt: 990d71ae5a4SJacob Faibussowitsch mat->ops->productsymbolic = MatProductSymbolic_SeqAIJKokkos_SeqAIJKokkos; 991d71ae5a4SJacob Faibussowitsch break; 992a3f881fbSStefano Zampini case MATPRODUCT_PtAP: 993a3f881fbSStefano Zampini case MATPRODUCT_RARt: 994d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABC: 995d71ae5a4SJacob Faibussowitsch mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 996d71ae5a4SJacob Faibussowitsch break; 997d71ae5a4SJacob Faibussowitsch default: 998d71ae5a4SJacob Faibussowitsch break; 999a3f881fbSStefano Zampini } 1000a3f881fbSStefano Zampini } else { /* fallback for AIJ */ 10019566063dSJacob Faibussowitsch PetscCall(MatProductSetFromOptions_SeqAIJ(mat)); 1002a3f881fbSStefano Zampini } 10033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1004a3f881fbSStefano Zampini } 1005a587d139SMark 1006d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatScale_SeqAIJKokkos(Mat A, PetscScalar a) 1007d71ae5a4SJacob Faibussowitsch { 1008f0cf5187SStefano Zampini Mat_SeqAIJKokkos *aijkok; 1009f0cf5187SStefano Zampini 1010f0cf5187SStefano Zampini PetscFunctionBegin; 10119566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 10129566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 1013f0cf5187SStefano Zampini aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1014d326c3f1SJunchao Zhang KokkosBlas::scal(PetscGetKokkosExecutionSpace(), aijkok->a_dual.view_device(), a, aijkok->a_dual.view_device()); 10159566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(A)); 10169566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(aijkok->a_dual.extent(0))); 10179566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 10183ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1019f0cf5187SStefano Zampini } 1020f0cf5187SStefano Zampini 1021f4747e26SJunchao Zhang // add a to A's diagonal (if A is square) or main diagonal (if A is rectangular) 1022f4747e26SJunchao Zhang static PetscErrorCode MatShift_SeqAIJKokkos(Mat A, PetscScalar a) 1023f4747e26SJunchao Zhang { 1024f4747e26SJunchao Zhang Mat_SeqAIJ *aijseq = static_cast<Mat_SeqAIJ *>(A->data); 1025f4747e26SJunchao Zhang 1026f4747e26SJunchao Zhang PetscFunctionBegin; 1027f4747e26SJunchao Zhang if (A->assembled && aijseq->diagonaldense) { // no missing diagonals 1028f4747e26SJunchao Zhang PetscInt n = PetscMin(A->rmap->n, A->cmap->n); 1029f4747e26SJunchao Zhang 1030f4747e26SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 1031f4747e26SJunchao Zhang PetscCall(MatSeqAIJKokkosSyncDevice(A)); 1032f4747e26SJunchao Zhang const auto aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1033f4747e26SJunchao Zhang const auto &Aa = aijkok->a_dual.view_device(); 1034f4747e26SJunchao Zhang const auto &Adiag = aijkok->diag_dual.view_device(); 1035d326c3f1SJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, n), KOKKOS_LAMBDA(const PetscInt i) { Aa(Adiag(i)) += a; })); 1036f4747e26SJunchao Zhang PetscCall(MatSeqAIJKokkosModifyDevice(A)); 1037f4747e26SJunchao Zhang PetscCall(PetscLogGpuFlops(n)); 1038f4747e26SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1039f4747e26SJunchao Zhang } else { // need reassembly, very slow! 1040f4747e26SJunchao Zhang PetscCall(MatShift_Basic(A, a)); 1041f4747e26SJunchao Zhang } 1042f4747e26SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 1043f4747e26SJunchao Zhang } 1044f4747e26SJunchao Zhang 1045f4747e26SJunchao Zhang static PetscErrorCode MatDiagonalSet_SeqAIJKokkos(Mat Y, Vec D, InsertMode is) 1046f4747e26SJunchao Zhang { 1047f4747e26SJunchao Zhang Mat_SeqAIJ *aijseq = static_cast<Mat_SeqAIJ *>(Y->data); 1048f4747e26SJunchao Zhang 1049f4747e26SJunchao Zhang PetscFunctionBegin; 1050f4747e26SJunchao Zhang if (Y->assembled && aijseq->diagonaldense) { // no missing diagonals 1051f4747e26SJunchao Zhang ConstPetscScalarKokkosView dv; 1052f4747e26SJunchao Zhang PetscInt n, nv; 1053f4747e26SJunchao Zhang 1054f4747e26SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 1055f4747e26SJunchao Zhang PetscCall(MatSeqAIJKokkosSyncDevice(Y)); 1056f4747e26SJunchao Zhang PetscCall(VecGetKokkosView(D, &dv)); 1057f4747e26SJunchao Zhang PetscCall(VecGetLocalSize(D, &nv)); 1058f4747e26SJunchao Zhang n = PetscMin(Y->rmap->n, Y->cmap->n); 1059f4747e26SJunchao Zhang PetscCheck(n == nv, PetscObjectComm((PetscObject)Y), PETSC_ERR_ARG_SIZ, "Matrix size and vector size do not match"); 1060f4747e26SJunchao Zhang 1061f4747e26SJunchao Zhang const auto aijkok = static_cast<Mat_SeqAIJKokkos *>(Y->spptr); 1062f4747e26SJunchao Zhang const auto &Aa = aijkok->a_dual.view_device(); 1063f4747e26SJunchao Zhang const auto &Adiag = aijkok->diag_dual.view_device(); 1064f4747e26SJunchao Zhang PetscCallCXX(Kokkos::parallel_for( 1065d326c3f1SJunchao Zhang Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, n), KOKKOS_LAMBDA(const PetscInt i) { 1066f4747e26SJunchao Zhang if (is == INSERT_VALUES) Aa(Adiag(i)) = dv(i); 1067f4747e26SJunchao Zhang else Aa(Adiag(i)) += dv(i); 1068f4747e26SJunchao Zhang })); 1069f4747e26SJunchao Zhang PetscCall(VecRestoreKokkosView(D, &dv)); 1070f4747e26SJunchao Zhang PetscCall(MatSeqAIJKokkosModifyDevice(Y)); 1071f4747e26SJunchao Zhang PetscCall(PetscLogGpuFlops(n)); 1072f4747e26SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1073f4747e26SJunchao Zhang } else { // need reassembly, very slow! 1074f4747e26SJunchao Zhang PetscCall(MatDiagonalSet_Default(Y, D, is)); 1075f4747e26SJunchao Zhang } 1076f4747e26SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 1077f4747e26SJunchao Zhang } 1078f4747e26SJunchao Zhang 1079f4747e26SJunchao Zhang static PetscErrorCode MatDiagonalScale_SeqAIJKokkos(Mat A, Vec ll, Vec rr) 1080f4747e26SJunchao Zhang { 1081f4747e26SJunchao Zhang Mat_SeqAIJ *aijseq = static_cast<Mat_SeqAIJ *>(A->data); 1082f4747e26SJunchao Zhang PetscInt m = A->rmap->n, n = A->cmap->n, nz = aijseq->nz; 1083f4747e26SJunchao Zhang ConstPetscScalarKokkosView lv, rv; 1084f4747e26SJunchao Zhang 1085f4747e26SJunchao Zhang PetscFunctionBegin; 1086f4747e26SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 1087f4747e26SJunchao Zhang PetscCall(MatSeqAIJKokkosSyncDevice(A)); 1088f4747e26SJunchao Zhang const auto aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1089f4747e26SJunchao Zhang const auto &Aa = aijkok->a_dual.view_device(); 1090f4747e26SJunchao Zhang const auto &Ai = aijkok->i_dual.view_device(); 1091f4747e26SJunchao Zhang const auto &Aj = aijkok->j_dual.view_device(); 1092f4747e26SJunchao Zhang if (ll) { 1093f4747e26SJunchao Zhang PetscCall(VecGetLocalSize(ll, &m)); 1094f4747e26SJunchao Zhang PetscCheck(m == A->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector wrong length"); 1095f4747e26SJunchao Zhang PetscCall(VecGetKokkosView(ll, &lv)); 1096f4747e26SJunchao Zhang PetscCallCXX(Kokkos::parallel_for( // for each row 1097d326c3f1SJunchao Zhang Kokkos::TeamPolicy<>(PetscGetKokkosExecutionSpace(), m, Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 1098f4747e26SJunchao Zhang PetscInt i = t.league_rank(); // row i 1099f4747e26SJunchao Zhang PetscInt len = Ai(i + 1) - Ai(i); 1100f4747e26SJunchao Zhang // scale entries on the row 1101f4747e26SJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(t, len), [&](PetscInt j) { Aa(Ai(i) + j) *= lv(i); }); 1102f4747e26SJunchao Zhang })); 1103f4747e26SJunchao Zhang PetscCall(VecRestoreKokkosView(ll, &lv)); 1104f4747e26SJunchao Zhang PetscCall(PetscLogGpuFlops(nz)); 1105f4747e26SJunchao Zhang } 1106f4747e26SJunchao Zhang if (rr) { 1107f4747e26SJunchao Zhang PetscCall(VecGetLocalSize(rr, &n)); 1108f4747e26SJunchao Zhang PetscCheck(n == A->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vector wrong length"); 1109f4747e26SJunchao Zhang PetscCall(VecGetKokkosView(rr, &rv)); 1110f4747e26SJunchao Zhang PetscCallCXX(Kokkos::parallel_for( // for each nonzero 1111d326c3f1SJunchao Zhang Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt k) { Aa(k) *= rv(Aj(k)); })); 1112f4747e26SJunchao Zhang PetscCall(VecRestoreKokkosView(rr, &lv)); 1113f4747e26SJunchao Zhang PetscCall(PetscLogGpuFlops(nz)); 1114f4747e26SJunchao Zhang } 1115f4747e26SJunchao Zhang PetscCall(MatSeqAIJKokkosModifyDevice(A)); 1116f4747e26SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1117f4747e26SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 1118f4747e26SJunchao Zhang } 1119f4747e26SJunchao Zhang 1120d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatZeroEntries_SeqAIJKokkos(Mat A) 1121d71ae5a4SJacob Faibussowitsch { 1122076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 1123a587d139SMark 1124a587d139SMark PetscFunctionBegin; 1125076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 11262328674fSJunchao Zhang if (aijkok) { /* Only zero the device if data is already there */ 1127d326c3f1SJunchao Zhang KokkosBlas::fill(PetscGetKokkosExecutionSpace(), aijkok->a_dual.view_device(), 0.0); 11289566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(A)); 11292328674fSJunchao Zhang } else { /* Might be preallocated but not assembled */ 11309566063dSJacob Faibussowitsch PetscCall(MatZeroEntries_SeqAIJ(A)); 11312328674fSJunchao Zhang } 11323ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1133a587d139SMark } 1134a587d139SMark 1135d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetDiagonal_SeqAIJKokkos(Mat A, Vec x) 1136d71ae5a4SJacob Faibussowitsch { 1137f78ce678SMark Adams Mat_SeqAIJKokkos *aijkok; 1138f78ce678SMark Adams PetscInt n; 1139f78ce678SMark Adams PetscScalarKokkosView xv; 1140f78ce678SMark Adams 1141f78ce678SMark Adams PetscFunctionBegin; 1142f78ce678SMark Adams PetscCall(VecGetLocalSize(x, &n)); 1143f78ce678SMark Adams PetscCheck(n == A->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming matrix and vector"); 1144f78ce678SMark Adams PetscCheck(A->factortype == MAT_FACTOR_NONE, PETSC_COMM_SELF, PETSC_ERR_SUP, "MatGetDiagonal_SeqAIJKokkos not supported on factored matrices"); 1145f78ce678SMark Adams 1146f78ce678SMark Adams PetscCall(MatSeqAIJKokkosSyncDevice(A)); 1147f78ce678SMark Adams aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1148f78ce678SMark Adams 1149f78ce678SMark Adams const auto &Aa = aijkok->a_dual.view_device(); 1150f78ce678SMark Adams const auto &Ai = aijkok->i_dual.view_device(); 1151f78ce678SMark Adams const auto &Adiag = aijkok->diag_dual.view_device(); 1152f78ce678SMark Adams 1153f78ce678SMark Adams PetscCall(VecGetKokkosViewWrite(x, &xv)); 11549371c9d4SSatish Balay Kokkos::parallel_for( 1155d326c3f1SJunchao Zhang Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, n), KOKKOS_LAMBDA(const PetscInt i) { 1156f78ce678SMark Adams if (Adiag(i) < Ai(i + 1)) xv(i) = Aa(Adiag(i)); 1157f78ce678SMark Adams else xv(i) = 0; 1158f78ce678SMark Adams }); 1159f78ce678SMark Adams PetscCall(VecRestoreKokkosViewWrite(x, &xv)); 11603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1161f78ce678SMark Adams } 1162f78ce678SMark Adams 1163db78de30SJunchao Zhang /* Get a Kokkos View from a mat of type MatSeqAIJKokkos */ 1164d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJGetKokkosView(Mat A, ConstMatScalarKokkosView *kv) 1165d71ae5a4SJacob Faibussowitsch { 1166db78de30SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 1167db78de30SJunchao Zhang 1168db78de30SJunchao Zhang PetscFunctionBegin; 1169db78de30SJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 11704f572ea9SToby Isaac PetscAssertPointer(kv, 2); 1171db78de30SJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 11729566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 1173db78de30SJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1174076ba34aSJunchao Zhang *kv = aijkok->a_dual.view_device(); 11753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1176db78de30SJunchao Zhang } 1177db78de30SJunchao Zhang 1178d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJRestoreKokkosView(Mat A, ConstMatScalarKokkosView *kv) 1179d71ae5a4SJacob Faibussowitsch { 1180db78de30SJunchao Zhang PetscFunctionBegin; 1181db78de30SJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 11824f572ea9SToby Isaac PetscAssertPointer(kv, 2); 1183db78de30SJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 11843ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1185db78de30SJunchao Zhang } 1186db78de30SJunchao Zhang 1187d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJGetKokkosView(Mat A, MatScalarKokkosView *kv) 1188d71ae5a4SJacob Faibussowitsch { 1189db78de30SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 1190db78de30SJunchao Zhang 1191db78de30SJunchao Zhang PetscFunctionBegin; 1192db78de30SJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 11934f572ea9SToby Isaac PetscAssertPointer(kv, 2); 1194db78de30SJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 11959566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 1196db78de30SJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1197076ba34aSJunchao Zhang *kv = aijkok->a_dual.view_device(); 11983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1199db78de30SJunchao Zhang } 1200db78de30SJunchao Zhang 1201d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJRestoreKokkosView(Mat A, MatScalarKokkosView *kv) 1202d71ae5a4SJacob Faibussowitsch { 1203db78de30SJunchao Zhang PetscFunctionBegin; 1204db78de30SJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 12054f572ea9SToby Isaac PetscAssertPointer(kv, 2); 1206db78de30SJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 12079566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(A)); 12083ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1209db78de30SJunchao Zhang } 1210db78de30SJunchao Zhang 1211d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJGetKokkosViewWrite(Mat A, MatScalarKokkosView *kv) 1212d71ae5a4SJacob Faibussowitsch { 1213db78de30SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 1214db78de30SJunchao Zhang 1215db78de30SJunchao Zhang PetscFunctionBegin; 1216db78de30SJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 12174f572ea9SToby Isaac PetscAssertPointer(kv, 2); 1218db78de30SJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 1219db78de30SJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1220076ba34aSJunchao Zhang *kv = aijkok->a_dual.view_device(); 12213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1222db78de30SJunchao Zhang } 1223db78de30SJunchao Zhang 1224d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJRestoreKokkosViewWrite(Mat A, MatScalarKokkosView *kv) 1225d71ae5a4SJacob Faibussowitsch { 1226db78de30SJunchao Zhang PetscFunctionBegin; 1227db78de30SJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 12284f572ea9SToby Isaac PetscAssertPointer(kv, 2); 1229db78de30SJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 12309566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(A)); 12313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1232db78de30SJunchao Zhang } 1233db78de30SJunchao Zhang 1234c0c276a7Ssdargavi PetscErrorCode MatCreateSeqAIJKokkosWithKokkosViews(MPI_Comm comm, PetscInt m, PetscInt n, Kokkos::View<PetscInt *> &i_d, Kokkos::View<PetscInt *> &j_d, Kokkos::View<PetscScalar *> &a_d, Mat *A) 1235c0c276a7Ssdargavi { 1236c0c276a7Ssdargavi Mat_SeqAIJKokkos *akok; 1237c0c276a7Ssdargavi 1238c0c276a7Ssdargavi PetscFunctionBegin; 1239c0c276a7Ssdargavi auto exec = PetscGetKokkosExecutionSpace(); 1240c0c276a7Ssdargavi // Create host copies of the input aij 1241c0c276a7Ssdargavi auto i_h = Kokkos::create_mirror_view_and_copy(HostMirrorMemorySpace(), i_d); 1242c0c276a7Ssdargavi auto j_h = Kokkos::create_mirror_view_and_copy(HostMirrorMemorySpace(), j_d); 1243c0c276a7Ssdargavi // Don't copy the vals to the host now 1244c0c276a7Ssdargavi auto a_h = Kokkos::create_mirror_view(HostMirrorMemorySpace(), a_d); 1245c0c276a7Ssdargavi 1246c0c276a7Ssdargavi MatScalarKokkosDualView a_dual = MatScalarKokkosDualView(a_d, a_h); 1247c0c276a7Ssdargavi // Note we have modified device data so it will copy lazily 1248c0c276a7Ssdargavi a_dual.modify_device(); 1249c0c276a7Ssdargavi MatRowMapKokkosDualView i_dual = MatRowMapKokkosDualView(i_d, i_h); 1250c0c276a7Ssdargavi MatColIdxKokkosDualView j_dual = MatColIdxKokkosDualView(j_d, j_h); 1251c0c276a7Ssdargavi 1252c0c276a7Ssdargavi PetscCallCXX(akok = new Mat_SeqAIJKokkos(m, n, j_dual.extent(0), i_dual, j_dual, a_dual)); 1253c0c276a7Ssdargavi PetscCall(MatCreate(comm, A)); 1254c0c276a7Ssdargavi PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(*A, akok)); 1255c0c276a7Ssdargavi PetscFunctionReturn(PETSC_SUCCESS); 1256c0c276a7Ssdargavi } 1257c0c276a7Ssdargavi 1258c17cf699SJunchao Zhang /* Computes Y += alpha X */ 1259d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatAXPY_SeqAIJKokkos(Mat Y, PetscScalar alpha, Mat X, MatStructure pattern) 1260d71ae5a4SJacob Faibussowitsch { 1261a587d139SMark Mat_SeqAIJ *x = (Mat_SeqAIJ *)X->data, *y = (Mat_SeqAIJ *)Y->data; 1262c17cf699SJunchao Zhang Mat_SeqAIJKokkos *xkok, *ykok, *zkok; 1263c17cf699SJunchao Zhang ConstMatScalarKokkosView Xa; 1264c17cf699SJunchao Zhang MatScalarKokkosView Ya; 12654df4a32cSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 1266a587d139SMark 1267a587d139SMark PetscFunctionBegin; 1268c17cf699SJunchao Zhang PetscCheckTypeName(Y, MATSEQAIJKOKKOS); 1269c17cf699SJunchao Zhang PetscCheckTypeName(X, MATSEQAIJKOKKOS); 12709566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(Y)); 12719566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(X)); 12729566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1273db78de30SJunchao Zhang 1274c17cf699SJunchao Zhang if (pattern != SAME_NONZERO_PATTERN && x->nz == y->nz) { 1275a587d139SMark PetscBool e; 12769566063dSJacob Faibussowitsch PetscCall(PetscArraycmp(x->i, y->i, Y->rmap->n + 1, &e)); 1277a587d139SMark if (e) { 12789566063dSJacob Faibussowitsch PetscCall(PetscArraycmp(x->j, y->j, y->nz, &e)); 1279c17cf699SJunchao Zhang if (e) pattern = SAME_NONZERO_PATTERN; 1280a587d139SMark } 1281a587d139SMark } 1282db78de30SJunchao Zhang 1283c17cf699SJunchao Zhang /* cusparseDcsrgeam2() computes C = alpha A + beta B. If one knew sparsity pattern of C, one can skip 1284c17cf699SJunchao Zhang cusparseScsrgeam2_bufferSizeExt() / cusparseXcsrgeam2Nnz(), and directly call cusparseScsrgeam2(). 1285c17cf699SJunchao Zhang If X is SUBSET_NONZERO_PATTERN of Y, we could take advantage of this cusparse feature. However, 1286c17cf699SJunchao Zhang KokkosSparse::spadd(alpha,A,beta,B,C) has symbolic and numeric phases, MatAXPY does not. 1287c17cf699SJunchao Zhang */ 1288c17cf699SJunchao Zhang ykok = static_cast<Mat_SeqAIJKokkos *>(Y->spptr); 1289c17cf699SJunchao Zhang xkok = static_cast<Mat_SeqAIJKokkos *>(X->spptr); 1290c17cf699SJunchao Zhang Xa = xkok->a_dual.view_device(); 1291c17cf699SJunchao Zhang Ya = ykok->a_dual.view_device(); 1292c17cf699SJunchao Zhang 1293c17cf699SJunchao Zhang if (pattern == SAME_NONZERO_PATTERN) { 1294d326c3f1SJunchao Zhang KokkosBlas::axpy(exec, alpha, Xa, Ya); 12959566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(Y)); 1296c17cf699SJunchao Zhang } else if (pattern == SUBSET_NONZERO_PATTERN) { 1297c17cf699SJunchao Zhang MatRowMapKokkosView Xi = xkok->i_dual.view_device(), Yi = ykok->i_dual.view_device(); 1298c17cf699SJunchao Zhang MatColIdxKokkosView Xj = xkok->j_dual.view_device(), Yj = ykok->j_dual.view_device(); 1299c17cf699SJunchao Zhang 13009371c9d4SSatish Balay Kokkos::parallel_for( 1301d326c3f1SJunchao Zhang Kokkos::TeamPolicy<>(exec, Y->rmap->n, 1), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 13020e3ece09SJunchao Zhang PetscInt i = t.league_rank(); // row i 13030e3ece09SJunchao Zhang Kokkos::single(Kokkos::PerTeam(t), [=]() { 13040e3ece09SJunchao Zhang // Only one thread works in a team 1305c17cf699SJunchao Zhang PetscInt p, q = Yi(i); 13060e3ece09SJunchao Zhang for (p = Xi(i); p < Xi(i + 1); p++) { // For each nonzero on row i of X, 13070e3ece09SJunchao Zhang while (Xj(p) != Yj(q) && q < Yi(i + 1)) q++; // find the matching nonzero on row i of Y. 13080e3ece09SJunchao Zhang if (Xj(p) == Yj(q)) { // Found it 1309c17cf699SJunchao Zhang Ya(q) += alpha * Xa(p); 1310c17cf699SJunchao Zhang q++; 1311a587d139SMark } else { 13120e3ece09SJunchao Zhang // If not found, it indicates the input is wrong (X is not a SUBSET_NONZERO_PATTERN of Y). 13130e3ece09SJunchao Zhang // Just insert a NaN at the beginning of row i if it is not empty, to make the result wrong. 13140e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_VERSION_GE(3, 7, 0) 13150e3ece09SJunchao Zhang if (Yi(i) != Yi(i + 1)) Ya(Yi(i)) = Kokkos::ArithTraits<PetscScalar>::nan(); 13168b8b16f9SJunchao Zhang #else 13170e3ece09SJunchao Zhang if (Yi(i) != Yi(i + 1)) Ya(Yi(i)) = Kokkos::Experimental::nan("1"); 13188b8b16f9SJunchao Zhang #endif 1319a587d139SMark } 1320c17cf699SJunchao Zhang } 1321c17cf699SJunchao Zhang }); 1322c17cf699SJunchao Zhang }); 13239566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(Y)); 13240e3ece09SJunchao Zhang } else { // different nonzero patterns 1325c17cf699SJunchao Zhang Mat Z; 1326c17cf699SJunchao Zhang KokkosCsrMatrix zcsr; 1327c17cf699SJunchao Zhang KernelHandle kh; 13280e3ece09SJunchao Zhang kh.create_spadd_handle(true); // X, Y are sorted 1329c17cf699SJunchao Zhang KokkosSparse::spadd_symbolic(&kh, xkok->csrmat, ykok->csrmat, zcsr); 1330c17cf699SJunchao Zhang KokkosSparse::spadd_numeric(&kh, alpha, xkok->csrmat, (PetscScalar)1.0, ykok->csrmat, zcsr); 1331c17cf699SJunchao Zhang zkok = new Mat_SeqAIJKokkos(zcsr); 13329566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF, zkok, &Z)); 13339566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(Y, &Z)); 1334c17cf699SJunchao Zhang kh.destroy_spadd_handle(); 1335c17cf699SJunchao Zhang } 13369566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 13370e3ece09SJunchao Zhang PetscCall(PetscLogGpuFlops(xkok->a_dual.extent(0) * 2)); // Because we scaled X and then added it to Y 13383ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1339a587d139SMark } 1340a587d139SMark 13412c4ab24aSJunchao Zhang struct MatCOOStruct_SeqAIJKokkos { 13422c4ab24aSJunchao Zhang PetscCount n; 13432c4ab24aSJunchao Zhang PetscCount Atot; 13442c4ab24aSJunchao Zhang PetscInt nz; 13452c4ab24aSJunchao Zhang PetscCountKokkosView jmap; 13462c4ab24aSJunchao Zhang PetscCountKokkosView perm; 13472c4ab24aSJunchao Zhang 13482c4ab24aSJunchao Zhang MatCOOStruct_SeqAIJKokkos(const MatCOOStruct_SeqAIJ *coo_h) 13492c4ab24aSJunchao Zhang { 13502c4ab24aSJunchao Zhang nz = coo_h->nz; 13512c4ab24aSJunchao Zhang n = coo_h->n; 13522c4ab24aSJunchao Zhang Atot = coo_h->Atot; 13532c4ab24aSJunchao Zhang jmap = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), PetscCountKokkosViewHost(coo_h->jmap, nz + 1)); 13542c4ab24aSJunchao Zhang perm = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), PetscCountKokkosViewHost(coo_h->perm, Atot)); 13552c4ab24aSJunchao Zhang } 13562c4ab24aSJunchao Zhang }; 13572c4ab24aSJunchao Zhang 135849abdd8aSBarry Smith static PetscErrorCode MatCOOStructDestroy_SeqAIJKokkos(void **data) 13592c4ab24aSJunchao Zhang { 13602c4ab24aSJunchao Zhang PetscFunctionBegin; 136149abdd8aSBarry Smith PetscCallCXX(delete static_cast<MatCOOStruct_SeqAIJKokkos *>(*data)); 13622c4ab24aSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 13632c4ab24aSJunchao Zhang } 13642c4ab24aSJunchao Zhang 1365d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetPreallocationCOO_SeqAIJKokkos(Mat mat, PetscCount coo_n, PetscInt coo_i[], PetscInt coo_j[]) 1366d71ae5a4SJacob Faibussowitsch { 136742550becSJunchao Zhang Mat_SeqAIJKokkos *akok; 136842550becSJunchao Zhang Mat_SeqAIJ *aseq; 136903e76207SPierre Jolivet PetscContainer container_h; 13702c4ab24aSJunchao Zhang MatCOOStruct_SeqAIJ *coo_h; 13712c4ab24aSJunchao Zhang MatCOOStruct_SeqAIJKokkos *coo_d; 137242550becSJunchao Zhang 137342550becSJunchao Zhang PetscFunctionBegin; 13749566063dSJacob Faibussowitsch PetscCall(MatSetPreallocationCOO_SeqAIJ(mat, coo_n, coo_i, coo_j)); 1375394ed5ebSJunchao Zhang aseq = static_cast<Mat_SeqAIJ *>(mat->data); 137642550becSJunchao Zhang akok = static_cast<Mat_SeqAIJKokkos *>(mat->spptr); 1377cbc6b225SStefano Zampini delete akok; 1378f4747e26SJunchao Zhang mat->spptr = akok = new Mat_SeqAIJKokkos(mat->rmap->n, mat->cmap->n, aseq, mat->nonzerostate + 1, PETSC_FALSE); 13799566063dSJacob Faibussowitsch PetscCall(MatZeroEntries_SeqAIJKokkos(mat)); 13802c4ab24aSJunchao Zhang 13812c4ab24aSJunchao Zhang // Copy the COO struct to device 13822c4ab24aSJunchao Zhang PetscCall(PetscObjectQuery((PetscObject)mat, "__PETSc_MatCOOStruct_Host", (PetscObject *)&container_h)); 13832c4ab24aSJunchao Zhang PetscCall(PetscContainerGetPointer(container_h, (void **)&coo_h)); 13842c4ab24aSJunchao Zhang PetscCallCXX(coo_d = new MatCOOStruct_SeqAIJKokkos(coo_h)); 13852c4ab24aSJunchao Zhang 13862c4ab24aSJunchao Zhang // Put the COO struct in a container and then attach that to the matrix 138703e76207SPierre Jolivet PetscCall(PetscObjectContainerCompose((PetscObject)mat, "__PETSc_MatCOOStruct_Device", coo_d, MatCOOStructDestroy_SeqAIJKokkos)); 13883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 138942550becSJunchao Zhang } 139042550becSJunchao Zhang 1391d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetValuesCOO_SeqAIJKokkos(Mat A, const PetscScalar v[], InsertMode imode) 1392d71ae5a4SJacob Faibussowitsch { 139342550becSJunchao Zhang MatScalarKokkosView Aa; 139442550becSJunchao Zhang ConstMatScalarKokkosView kv; 139542550becSJunchao Zhang PetscMemType memtype; 13962c4ab24aSJunchao Zhang PetscContainer container; 13972c4ab24aSJunchao Zhang MatCOOStruct_SeqAIJKokkos *coo; 139842550becSJunchao Zhang 139942550becSJunchao Zhang PetscFunctionBegin; 14002c4ab24aSJunchao Zhang PetscCall(PetscObjectQuery((PetscObject)A, "__PETSc_MatCOOStruct_Device", (PetscObject *)&container)); 14012c4ab24aSJunchao Zhang PetscCall(PetscContainerGetPointer(container, (void **)&coo)); 14022c4ab24aSJunchao Zhang 14032c4ab24aSJunchao Zhang const auto &n = coo->n; 14042c4ab24aSJunchao Zhang const auto &Annz = coo->nz; 14052c4ab24aSJunchao Zhang const auto &jmap = coo->jmap; 14062c4ab24aSJunchao Zhang const auto &perm = coo->perm; 14072c4ab24aSJunchao Zhang 14089566063dSJacob Faibussowitsch PetscCall(PetscGetMemType(v, &memtype)); 140942550becSJunchao Zhang if (PetscMemTypeHost(memtype)) { /* If user gave v[] in host, we might need to copy it to device if any */ 14102c4ab24aSJunchao Zhang kv = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), ConstMatScalarKokkosViewHost(v, n)); 141142550becSJunchao Zhang } else { 14122c4ab24aSJunchao Zhang kv = ConstMatScalarKokkosView(v, n); /* Directly use v[]'s memory */ 141342550becSJunchao Zhang } 141442550becSJunchao Zhang 1415c7b718f4SJunchao Zhang if (imode == INSERT_VALUES) PetscCall(MatSeqAIJGetKokkosViewWrite(A, &Aa)); /* write matrix values */ 1416c7b718f4SJunchao Zhang else PetscCall(MatSeqAIJGetKokkosView(A, &Aa)); /* read & write matrix values */ 141742550becSJunchao Zhang 141808bb9926SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 14199371c9d4SSatish Balay Kokkos::parallel_for( 1420d326c3f1SJunchao Zhang Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, Annz), KOKKOS_LAMBDA(const PetscCount i) { 1421c7b718f4SJunchao Zhang PetscScalar sum = 0.0; 1422c7b718f4SJunchao Zhang for (PetscCount k = jmap(i); k < jmap(i + 1); k++) sum += kv(perm(k)); 1423c7b718f4SJunchao Zhang Aa(i) = (imode == INSERT_VALUES ? 0.0 : Aa(i)) + sum; 1424c7b718f4SJunchao Zhang }); 142508bb9926SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1426394ed5ebSJunchao Zhang 14279566063dSJacob Faibussowitsch if (imode == INSERT_VALUES) PetscCall(MatSeqAIJRestoreKokkosViewWrite(A, &Aa)); 14289566063dSJacob Faibussowitsch else PetscCall(MatSeqAIJRestoreKokkosView(A, &Aa)); 14293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 143042550becSJunchao Zhang } 143142550becSJunchao Zhang 1432d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetOps_SeqAIJKokkos(Mat A) 1433d71ae5a4SJacob Faibussowitsch { 1434076ba34aSJunchao Zhang Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 1435076ba34aSJunchao Zhang 14368c3ff71bSJunchao Zhang PetscFunctionBegin; 1437076ba34aSJunchao Zhang A->offloadmask = PETSC_OFFLOAD_KOKKOS; /* We do not really use this flag */ 14386f3d89d0SStefano Zampini A->boundtocpu = PETSC_FALSE; 14396f3d89d0SStefano Zampini 14408c3ff71bSJunchao Zhang A->ops->assemblyend = MatAssemblyEnd_SeqAIJKokkos; 14418c3ff71bSJunchao Zhang A->ops->destroy = MatDestroy_SeqAIJKokkos; 14428c3ff71bSJunchao Zhang A->ops->duplicate = MatDuplicate_SeqAIJKokkos; 1443a587d139SMark A->ops->axpy = MatAXPY_SeqAIJKokkos; 1444f0cf5187SStefano Zampini A->ops->scale = MatScale_SeqAIJKokkos; 1445a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJKokkos; 1446076ba34aSJunchao Zhang A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJKokkos; 14478c3ff71bSJunchao Zhang A->ops->mult = MatMult_SeqAIJKokkos; 14488c3ff71bSJunchao Zhang A->ops->multadd = MatMultAdd_SeqAIJKokkos; 14498c3ff71bSJunchao Zhang A->ops->multtranspose = MatMultTranspose_SeqAIJKokkos; 14508c3ff71bSJunchao Zhang A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJKokkos; 14518c3ff71bSJunchao Zhang A->ops->multhermitiantranspose = MatMultHermitianTranspose_SeqAIJKokkos; 14528c3ff71bSJunchao Zhang A->ops->multhermitiantransposeadd = MatMultHermitianTransposeAdd_SeqAIJKokkos; 1453076ba34aSJunchao Zhang A->ops->productnumeric = MatProductNumeric_SeqAIJKokkos_SeqAIJKokkos; 14540ecb592aSJunchao Zhang A->ops->transpose = MatTranspose_SeqAIJKokkos; 1455152b3e56SJunchao Zhang A->ops->setoption = MatSetOption_SeqAIJKokkos; 1456f78ce678SMark Adams A->ops->getdiagonal = MatGetDiagonal_SeqAIJKokkos; 1457f4747e26SJunchao Zhang A->ops->shift = MatShift_SeqAIJKokkos; 1458f4747e26SJunchao Zhang A->ops->diagonalset = MatDiagonalSet_SeqAIJKokkos; 1459f4747e26SJunchao Zhang A->ops->diagonalscale = MatDiagonalScale_SeqAIJKokkos; 1460076ba34aSJunchao Zhang a->ops->getarray = MatSeqAIJGetArray_SeqAIJKokkos; 1461076ba34aSJunchao Zhang a->ops->restorearray = MatSeqAIJRestoreArray_SeqAIJKokkos; 1462076ba34aSJunchao Zhang a->ops->getarrayread = MatSeqAIJGetArrayRead_SeqAIJKokkos; 1463076ba34aSJunchao Zhang a->ops->restorearrayread = MatSeqAIJRestoreArrayRead_SeqAIJKokkos; 1464076ba34aSJunchao Zhang a->ops->getarraywrite = MatSeqAIJGetArrayWrite_SeqAIJKokkos; 1465076ba34aSJunchao Zhang a->ops->restorearraywrite = MatSeqAIJRestoreArrayWrite_SeqAIJKokkos; 14667ee59b9bSJunchao Zhang a->ops->getcsrandmemtype = MatSeqAIJGetCSRAndMemType_SeqAIJKokkos; 146742550becSJunchao Zhang 14689566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetPreallocationCOO_C", MatSetPreallocationCOO_SeqAIJKokkos)); 14699566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetValuesCOO_C", MatSetValuesCOO_SeqAIJKokkos)); 147057761e9aSJunchao Zhang #if defined(PETSC_HAVE_HYPRE) 147157761e9aSJunchao Zhang PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatConvert_seqaijkokkos_hypre_C", MatConvert_AIJ_HYPRE)); 147257761e9aSJunchao Zhang #endif 14733ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1474076ba34aSJunchao Zhang } 1475076ba34aSJunchao Zhang 14769d13fa56SJunchao Zhang /* 14779d13fa56SJunchao Zhang Extract the (prescribled) diagonal blocks of the matrix and then invert them 14789d13fa56SJunchao Zhang 14799d13fa56SJunchao Zhang Input Parameters: 14809d13fa56SJunchao Zhang + A - the MATSEQAIJKOKKOS matrix 14819d13fa56SJunchao Zhang . bs - block sizes in 'csr' format, i.e., the i-th block has size bs(i+1) - bs(i) 14829d13fa56SJunchao Zhang . bs2 - square of block sizes in 'csr' format, i.e., the i-th block should be stored at offset bs2(i) in diagVal[] 14839d13fa56SJunchao Zhang . blkMap - map row ids to block ids, i.e., row i belongs to the block blkMap(i) 14849d13fa56SJunchao Zhang - work - a pre-allocated work buffer (as big as diagVal) for use by this routine 14859d13fa56SJunchao Zhang 14869d13fa56SJunchao Zhang Output Parameter: 14879d13fa56SJunchao Zhang . diagVal - the (pre-allocated) buffer to store the inverted blocks (each block is stored in column-major order) 14889d13fa56SJunchao Zhang */ 14899d13fa56SJunchao Zhang PETSC_INTERN PetscErrorCode MatInvertVariableBlockDiagonal_SeqAIJKokkos(Mat A, const PetscIntKokkosView &bs, const PetscIntKokkosView &bs2, const PetscIntKokkosView &blkMap, PetscScalarKokkosView &work, PetscScalarKokkosView &diagVal) 14909d13fa56SJunchao Zhang { 14919d13fa56SJunchao Zhang Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 14929d13fa56SJunchao Zhang PetscInt nblocks = bs.extent(0) - 1; 14939d13fa56SJunchao Zhang 14949d13fa56SJunchao Zhang PetscFunctionBegin; 14959d13fa56SJunchao Zhang PetscCall(MatSeqAIJKokkosSyncDevice(A)); // Since we'll access A's value on device 14969d13fa56SJunchao Zhang 14979d13fa56SJunchao Zhang // Pull out the diagonal blocks of the matrix and then invert the blocks 14989d13fa56SJunchao Zhang auto Aa = akok->a_dual.view_device(); 14999d13fa56SJunchao Zhang auto Ai = akok->i_dual.view_device(); 15009d13fa56SJunchao Zhang auto Aj = akok->j_dual.view_device(); 15019d13fa56SJunchao Zhang auto Adiag = akok->diag_dual.view_device(); 15029d13fa56SJunchao Zhang // TODO: how to tune the team size? 150345402d8aSJunchao Zhang #if defined(KOKKOS_ENABLE_UNIFIED_MEMORY) 15049d13fa56SJunchao Zhang auto ts = Kokkos::AUTO(); 15059d13fa56SJunchao Zhang #else 15069d13fa56SJunchao Zhang auto ts = 16; // improved performance 30% over Kokkos::AUTO() with CUDA, but failed with "Kokkos::abort: Requested Team Size is too large!" on CPUs 15079d13fa56SJunchao Zhang #endif 15089d13fa56SJunchao Zhang PetscCallCXX(Kokkos::parallel_for( 1509d326c3f1SJunchao Zhang Kokkos::TeamPolicy<>(PetscGetKokkosExecutionSpace(), nblocks, ts), KOKKOS_LAMBDA(const KokkosTeamMemberType &teamMember) { 15109d13fa56SJunchao Zhang const PetscInt bid = teamMember.league_rank(); // block id 15119d13fa56SJunchao Zhang const PetscInt rstart = bs(bid); // this block starts from this row 15129d13fa56SJunchao Zhang const PetscInt m = bs(bid + 1) - bs(bid); // size of this block 15139d13fa56SJunchao Zhang const auto &B = Kokkos::View<PetscScalar **, Kokkos::LayoutLeft>(&diagVal(bs2(bid)), m, m); // column-major order 15149d13fa56SJunchao Zhang const auto &W = PetscScalarKokkosView(&work(bs2(bid)), m * m); 15159d13fa56SJunchao Zhang 15169d13fa56SJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(teamMember, m), [=](const PetscInt &r) { // r-th row in B 15179d13fa56SJunchao Zhang PetscInt i = rstart + r; // i-th row in A 15189d13fa56SJunchao Zhang 15199d13fa56SJunchao Zhang if (Ai(i) <= Adiag(i) && Adiag(i) < Ai(i + 1)) { // if the diagonal exists (common case) 15209d13fa56SJunchao Zhang PetscInt first = Adiag(i) - r; // we start to check nonzeros from here along this row 15219d13fa56SJunchao Zhang 15229d13fa56SJunchao Zhang for (PetscInt c = 0; c < m; c++) { // walk n steps to see what column indices we will meet 15239d13fa56SJunchao Zhang if (first + c < Ai(i) || first + c >= Ai(i + 1)) { // this entry (first+c) is out of range of this row, in other words, its value is zero 15249d13fa56SJunchao Zhang B(r, c) = 0.0; 15259d13fa56SJunchao Zhang } else if (Aj(first + c) == rstart + c) { // this entry is right on the (rstart+c) column 15269d13fa56SJunchao Zhang B(r, c) = Aa(first + c); 15279d13fa56SJunchao Zhang } else { // this entry does not show up in the CSR 15289d13fa56SJunchao Zhang B(r, c) = 0.0; 15299d13fa56SJunchao Zhang } 15309d13fa56SJunchao Zhang } 15319d13fa56SJunchao Zhang } else { // rare case that the diagonal does not exist 15329d13fa56SJunchao Zhang const PetscInt begin = Ai(i); 15339d13fa56SJunchao Zhang const PetscInt end = Ai(i + 1); 15349d13fa56SJunchao Zhang for (PetscInt c = 0; c < m; c++) B(r, c) = 0.0; 15359d13fa56SJunchao Zhang for (PetscInt j = begin; j < end; j++) { // scan the whole row; could use binary search but this is a rare case so we did not. 15369d13fa56SJunchao Zhang if (rstart <= Aj(j) && Aj(j) < rstart + m) B(r, Aj(j) - rstart) = Aa(j); 15379d13fa56SJunchao Zhang else if (Aj(j) >= rstart + m) break; 15389d13fa56SJunchao Zhang } 15399d13fa56SJunchao Zhang } 15409d13fa56SJunchao Zhang }); 15419d13fa56SJunchao Zhang 15429d13fa56SJunchao Zhang // LU-decompose B (w/o pivoting) and then invert B 15439d13fa56SJunchao Zhang KokkosBatched::TeamLU<KokkosTeamMemberType, KokkosBatched::Algo::LU::Unblocked>::invoke(teamMember, B, 0.0); 15449d13fa56SJunchao Zhang KokkosBatched::TeamInverseLU<KokkosTeamMemberType, KokkosBatched::Algo::InverseLU::Unblocked>::invoke(teamMember, B, W); 15459d13fa56SJunchao Zhang })); 15469d13fa56SJunchao Zhang // PetscLogGpuFlops() is done in the caller PCSetUp_VPBJacobi_Kokkos as we don't want to compute the flops in kernels 15479d13fa56SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 15489d13fa56SJunchao Zhang } 15499d13fa56SJunchao Zhang 1550d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatSetSeqAIJKokkosWithCSRMatrix(Mat A, Mat_SeqAIJKokkos *akok) 1551d71ae5a4SJacob Faibussowitsch { 1552076ba34aSJunchao Zhang Mat_SeqAIJ *aseq; 1553076ba34aSJunchao Zhang PetscInt i, m, n; 15544df4a32cSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 1555076ba34aSJunchao Zhang 1556076ba34aSJunchao Zhang PetscFunctionBegin; 15575f80ce2aSJacob Faibussowitsch PetscCheck(!A->spptr, PETSC_COMM_SELF, PETSC_ERR_PLIB, "A->spptr is supposed to be empty"); 1558076ba34aSJunchao Zhang 1559076ba34aSJunchao Zhang m = akok->nrows(); 1560076ba34aSJunchao Zhang n = akok->ncols(); 15619566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, m, n, m, n)); 15629566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATSEQAIJKOKKOS)); 1563076ba34aSJunchao Zhang 1564076ba34aSJunchao Zhang /* Set up data structures of A as a MATSEQAIJ */ 15659566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(A, MAT_SKIP_ALLOCATION, NULL)); 156657508eceSPierre Jolivet aseq = (Mat_SeqAIJ *)A->data; 1567076ba34aSJunchao Zhang 1568e36ced11SJunchao Zhang PetscCallCXX(akok->i_dual.sync_host(exec)); /* We always need sync'ed i, j on host */ 1569e36ced11SJunchao Zhang PetscCallCXX(akok->j_dual.sync_host(exec)); 1570e36ced11SJunchao Zhang PetscCallCXX(exec.fence()); 1571076ba34aSJunchao Zhang 1572076ba34aSJunchao Zhang aseq->i = akok->i_host_data(); 1573076ba34aSJunchao Zhang aseq->j = akok->j_host_data(); 1574076ba34aSJunchao Zhang aseq->a = akok->a_host_data(); 1575076ba34aSJunchao Zhang aseq->nonew = -1; /*this indicates that inserting a new value in the matrix that generates a new nonzero is an error*/ 1576076ba34aSJunchao Zhang aseq->free_a = PETSC_FALSE; 1577076ba34aSJunchao Zhang aseq->free_ij = PETSC_FALSE; 1578076ba34aSJunchao Zhang aseq->nz = akok->nnz(); 1579076ba34aSJunchao Zhang aseq->maxnz = aseq->nz; 1580076ba34aSJunchao Zhang 15819566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &aseq->imax)); 15829566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &aseq->ilen)); 1583ad540459SPierre Jolivet for (i = 0; i < m; i++) aseq->ilen[i] = aseq->imax[i] = aseq->i[i + 1] - aseq->i[i]; 1584076ba34aSJunchao Zhang 1585076ba34aSJunchao Zhang /* It is critical to set the nonzerostate, as we use it to check if sparsity pattern (hence data) has changed on host in MatAssemblyEnd */ 1586076ba34aSJunchao Zhang akok->nonzerostate = A->nonzerostate; 1587ff751488SJunchao Zhang A->spptr = akok; /* Set A->spptr before MatAssembly so that A->spptr won't be allocated again there */ 15889566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 15899566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 15903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1591076ba34aSJunchao Zhang } 1592076ba34aSJunchao Zhang 15930e3ece09SJunchao Zhang PETSC_INTERN PetscErrorCode MatSeqAIJKokkosGetKokkosCsrMatrix(Mat A, KokkosCsrMatrix *csr) 15940e3ece09SJunchao Zhang { 15950e3ece09SJunchao Zhang PetscFunctionBegin; 15960e3ece09SJunchao Zhang PetscCall(MatSeqAIJKokkosSyncDevice(A)); 15970e3ece09SJunchao Zhang *csr = static_cast<Mat_SeqAIJKokkos *>(A->spptr)->csrmat; 15980e3ece09SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 15990e3ece09SJunchao Zhang } 16000e3ece09SJunchao Zhang 16010e3ece09SJunchao Zhang PETSC_INTERN PetscErrorCode MatCreateSeqAIJKokkosWithKokkosCsrMatrix(MPI_Comm comm, KokkosCsrMatrix csr, Mat *A) 16020e3ece09SJunchao Zhang { 16030e3ece09SJunchao Zhang Mat_SeqAIJKokkos *akok; 16044d86920dSPierre Jolivet 16050e3ece09SJunchao Zhang PetscFunctionBegin; 16060e3ece09SJunchao Zhang PetscCallCXX(akok = new Mat_SeqAIJKokkos(csr)); 16070e3ece09SJunchao Zhang PetscCall(MatCreate(comm, A)); 16080e3ece09SJunchao Zhang PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(*A, akok)); 16090e3ece09SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 16100e3ece09SJunchao Zhang } 16110e3ece09SJunchao Zhang 1612076ba34aSJunchao Zhang /* Crete a SEQAIJKOKKOS matrix with a Mat_SeqAIJKokkos data structure 1613076ba34aSJunchao Zhang 1614076ba34aSJunchao Zhang Note we have names like MatSeqAIJSetPreallocationCSR, so I use capitalized CSR 1615076ba34aSJunchao Zhang */ 1616d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatCreateSeqAIJKokkosWithCSRMatrix(MPI_Comm comm, Mat_SeqAIJKokkos *akok, Mat *A) 1617d71ae5a4SJacob Faibussowitsch { 1618076ba34aSJunchao Zhang PetscFunctionBegin; 16199566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 16209566063dSJacob Faibussowitsch PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(*A, akok)); 16213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16228c3ff71bSJunchao Zhang } 16238c3ff71bSJunchao Zhang 1624152b3e56SJunchao Zhang /*@C 162511a5261eSBarry Smith MatCreateSeqAIJKokkos - Creates a sparse matrix in `MATSEQAIJKOKKOS` (compressed row) format 16268c3ff71bSJunchao Zhang (the default parallel PETSc format). This matrix will ultimately be handled by 162720f4b53cSBarry Smith Kokkos for calculations. 16288c3ff71bSJunchao Zhang 16298c3ff71bSJunchao Zhang Collective 16308c3ff71bSJunchao Zhang 16318c3ff71bSJunchao Zhang Input Parameters: 163211a5261eSBarry Smith + comm - MPI communicator, set to `PETSC_COMM_SELF` 16338c3ff71bSJunchao Zhang . m - number of rows 16348c3ff71bSJunchao Zhang . n - number of columns 163520f4b53cSBarry Smith . nz - number of nonzeros per row (same for all rows), ignored if `nnz` is provided 163620f4b53cSBarry Smith - nnz - array containing the number of nonzeros in the various rows (possibly different for each row) or `NULL` 16378c3ff71bSJunchao Zhang 16388c3ff71bSJunchao Zhang Output Parameter: 16398c3ff71bSJunchao Zhang . A - the matrix 16408c3ff71bSJunchao Zhang 16412ef1f0ffSBarry Smith Level: intermediate 16422ef1f0ffSBarry Smith 16432ef1f0ffSBarry Smith Notes: 164411a5261eSBarry Smith It is recommended that one use the `MatCreate()`, `MatSetType()` and/or `MatSetFromOptions()`, 16458c3ff71bSJunchao Zhang MatXXXXSetPreallocation() paradgm instead of this routine directly. 164611a5261eSBarry Smith [MatXXXXSetPreallocation() is, for example, `MatSeqAIJSetPreallocation()`] 16478c3ff71bSJunchao Zhang 164811a5261eSBarry Smith The AIJ format, also called 16492ef1f0ffSBarry Smith compressed row storage, is fully compatible with standard Fortran 16508c3ff71bSJunchao Zhang storage. That is, the stored row and column indices can begin at 165120f4b53cSBarry Smith either one (as in Fortran) or zero. 16528c3ff71bSJunchao Zhang 16532ef1f0ffSBarry Smith Specify the preallocated storage with either `nz` or `nnz` (not both). 16542ef1f0ffSBarry Smith Set `nz` = `PETSC_DEFAULT` and `nnz` = `NULL` for PETSc to control dynamic memory 16552ef1f0ffSBarry Smith allocation. 16568c3ff71bSJunchao Zhang 1657fe59aa6dSJacob Faibussowitsch .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MatCreateAIJ()`, `MatSetValues()`, `MatSeqAIJSetColumnIndices()`, `MatCreateSeqAIJWithArrays()` 16588c3ff71bSJunchao Zhang @*/ 1659d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateSeqAIJKokkos(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt nz, const PetscInt nnz[], Mat *A) 1660d71ae5a4SJacob Faibussowitsch { 16618c3ff71bSJunchao Zhang PetscFunctionBegin; 16629566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 16639566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 16649566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, m, n)); 16659566063dSJacob Faibussowitsch PetscCall(MatSetType(*A, MATSEQAIJKOKKOS)); 16669566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(*A, nz, (PetscInt *)nnz)); 16673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16688c3ff71bSJunchao Zhang } 1669930e68a5SMark Adams 1670aac854edSJunchao Zhang // After matrix numeric factorization, there are still steps to do before triangular solve can be called. 1671aac854edSJunchao Zhang // For example, for transpose solve, we might need to compute the transpose matrices if the solver does not support it (such as KK, while cusparse does). 1672aac854edSJunchao Zhang // In cusparse, one has to call cusparseSpSV_analysis() with updated triangular matrix values before calling cusparseSpSV_solve(). 1673aac854edSJunchao Zhang // Simiarily, in KK sptrsv_symbolic() has to be called before sptrsv_solve(). We put these steps in MatSeqAIJKokkos{Transpose}SolveCheck. 1674aac854edSJunchao Zhang static PetscErrorCode MatSeqAIJKokkosSolveCheck(Mat A) 1675d71ae5a4SJacob Faibussowitsch { 167686a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)A->spptr; 1677aac854edSJunchao Zhang const PetscBool has_lower = factors->iL_d.extent(0) ? PETSC_TRUE : PETSC_FALSE; // false with Choleksy 1678aac854edSJunchao Zhang const PetscBool has_upper = factors->iU_d.extent(0) ? PETSC_TRUE : PETSC_FALSE; // true with LU and Choleksy 167986a27549SJunchao Zhang 168086a27549SJunchao Zhang PetscFunctionBegin; 1681aac854edSJunchao Zhang if (!factors->sptrsv_symbolic_completed) { // If sptrsv_symbolic was not called yet 1682aac854edSJunchao Zhang if (has_upper) PetscCallCXX(sptrsv_symbolic(&factors->khU, factors->iU_d, factors->jU_d, factors->aU_d)); 1683aac854edSJunchao Zhang if (has_lower) PetscCallCXX(sptrsv_symbolic(&factors->khL, factors->iL_d, factors->jL_d, factors->aL_d)); 168486a27549SJunchao Zhang factors->sptrsv_symbolic_completed = PETSC_TRUE; 168586a27549SJunchao Zhang } 16863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 168786a27549SJunchao Zhang } 168886a27549SJunchao Zhang 1689d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJKokkosTransposeSolveCheck(Mat A) 1690d71ae5a4SJacob Faibussowitsch { 1691aac854edSJunchao Zhang const PetscInt n = A->rmap->n; 169286a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)A->spptr; 1693aac854edSJunchao Zhang const PetscBool has_lower = factors->iL_d.extent(0) ? PETSC_TRUE : PETSC_FALSE; // false with Choleksy 1694aac854edSJunchao Zhang const PetscBool has_upper = factors->iU_d.extent(0) ? PETSC_TRUE : PETSC_FALSE; // true with LU or Choleksy 169586a27549SJunchao Zhang 169686a27549SJunchao Zhang PetscFunctionBegin; 1697aac854edSJunchao Zhang if (!factors->transpose_updated) { 1698aac854edSJunchao Zhang if (has_upper) { 1699aac854edSJunchao Zhang if (!factors->iUt_d.extent(0)) { // Allocate Ut on device if not yet 1700aac854edSJunchao Zhang factors->iUt_d = MatRowMapKokkosView("factors->iUt_d", n + 1); // KK requires this view to be initialized to 0 to call transpose_matrix 17017b8d4ba6SJunchao Zhang factors->jUt_d = MatColIdxKokkosView(NoInit("factors->jUt_d"), factors->jU_d.extent(0)); 17027b8d4ba6SJunchao Zhang factors->aUt_d = MatScalarKokkosView(NoInit("factors->aUt_d"), factors->aU_d.extent(0)); 1703aac854edSJunchao Zhang } 170486a27549SJunchao Zhang 1705aac854edSJunchao Zhang if (factors->iU_h.extent(0)) { // If U is on host (factorization was done on host), we also compute the transpose on host 1706aac854edSJunchao Zhang if (!factors->U) { 1707aac854edSJunchao Zhang Mat_SeqAIJ *seq; 170886a27549SJunchao Zhang 1709aac854edSJunchao Zhang PetscCall(MatCreateSeqAIJWithArrays(PETSC_COMM_SELF, n, n, factors->iU_h.data(), factors->jU_h.data(), factors->aU_h.data(), &factors->U)); 1710aac854edSJunchao Zhang PetscCall(MatTranspose(factors->U, MAT_INITIAL_MATRIX, &factors->Ut)); 171186a27549SJunchao Zhang 1712aac854edSJunchao Zhang seq = static_cast<Mat_SeqAIJ *>(factors->Ut->data); 1713aac854edSJunchao Zhang factors->iUt_h = MatRowMapKokkosViewHost(seq->i, n + 1); 1714aac854edSJunchao Zhang factors->jUt_h = MatColIdxKokkosViewHost(seq->j, seq->nz); 1715aac854edSJunchao Zhang factors->aUt_h = MatScalarKokkosViewHost(seq->a, seq->nz); 1716aac854edSJunchao Zhang } else { 1717aac854edSJunchao Zhang PetscCall(MatTranspose(factors->U, MAT_REUSE_MATRIX, &factors->Ut)); // Matrix Ut' data is aliased with {i, j, a}Ut_h 1718aac854edSJunchao Zhang } 1719aac854edSJunchao Zhang // Copy Ut from host to device 1720aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->iUt_d, factors->iUt_h)); 1721aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->jUt_d, factors->jUt_h)); 1722aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->aUt_d, factors->aUt_h)); 1723aac854edSJunchao Zhang } else { // If U was computed on device, we also compute the transpose there 1724aac854edSJunchao Zhang // TODO: KK transpose_matrix() does not sort column indices, however cusparse requires sorted indices. We have to sort the indices, until KK provides finer control options. 1725aac854edSJunchao Zhang PetscCallCXX(transpose_matrix<ConstMatRowMapKokkosView, ConstMatColIdxKokkosView, ConstMatScalarKokkosView, MatRowMapKokkosView, MatColIdxKokkosView, MatScalarKokkosView, MatRowMapKokkosView, DefaultExecutionSpace>(n, n, factors->iU_d, 1726aac854edSJunchao Zhang factors->jU_d, factors->aU_d, 1727aac854edSJunchao Zhang factors->iUt_d, factors->jUt_d, 1728aac854edSJunchao Zhang factors->aUt_d)); 1729aac854edSJunchao Zhang PetscCallCXX(sort_crs_matrix<DefaultExecutionSpace, MatRowMapKokkosView, MatColIdxKokkosView, MatScalarKokkosView>(factors->iUt_d, factors->jUt_d, factors->aUt_d)); 1730aac854edSJunchao Zhang } 1731aac854edSJunchao Zhang PetscCallCXX(sptrsv_symbolic(&factors->khUt, factors->iUt_d, factors->jUt_d, factors->aUt_d)); 1732aac854edSJunchao Zhang } 1733aac854edSJunchao Zhang 1734aac854edSJunchao Zhang // do the same for L with LU 1735aac854edSJunchao Zhang if (has_lower) { 1736aac854edSJunchao Zhang if (!factors->iLt_d.extent(0)) { // Allocate Lt on device if not yet 1737aac854edSJunchao Zhang factors->iLt_d = MatRowMapKokkosView("factors->iLt_d", n + 1); // KK requires this view to be initialized to 0 to call transpose_matrix 1738aac854edSJunchao Zhang factors->jLt_d = MatColIdxKokkosView(NoInit("factors->jLt_d"), factors->jL_d.extent(0)); 1739aac854edSJunchao Zhang factors->aLt_d = MatScalarKokkosView(NoInit("factors->aLt_d"), factors->aL_d.extent(0)); 1740aac854edSJunchao Zhang } 1741aac854edSJunchao Zhang 1742aac854edSJunchao Zhang if (factors->iL_h.extent(0)) { // If L is on host, we also compute the transpose on host 1743aac854edSJunchao Zhang if (!factors->L) { 1744aac854edSJunchao Zhang Mat_SeqAIJ *seq; 1745aac854edSJunchao Zhang 1746aac854edSJunchao Zhang PetscCall(MatCreateSeqAIJWithArrays(PETSC_COMM_SELF, n, n, factors->iL_h.data(), factors->jL_h.data(), factors->aL_h.data(), &factors->L)); 1747aac854edSJunchao Zhang PetscCall(MatTranspose(factors->L, MAT_INITIAL_MATRIX, &factors->Lt)); 1748aac854edSJunchao Zhang 1749aac854edSJunchao Zhang seq = static_cast<Mat_SeqAIJ *>(factors->Lt->data); 1750aac854edSJunchao Zhang factors->iLt_h = MatRowMapKokkosViewHost(seq->i, n + 1); 1751aac854edSJunchao Zhang factors->jLt_h = MatColIdxKokkosViewHost(seq->j, seq->nz); 1752aac854edSJunchao Zhang factors->aLt_h = MatScalarKokkosViewHost(seq->a, seq->nz); 1753aac854edSJunchao Zhang } else { 1754aac854edSJunchao Zhang PetscCall(MatTranspose(factors->L, MAT_REUSE_MATRIX, &factors->Lt)); // Matrix Lt' data is aliased with {i, j, a}Lt_h 1755aac854edSJunchao Zhang } 1756aac854edSJunchao Zhang // Copy Lt from host to device 1757aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->iLt_d, factors->iLt_h)); 1758aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->jLt_d, factors->jLt_h)); 1759aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->aLt_d, factors->aLt_h)); 1760aac854edSJunchao Zhang } else { // If L was computed on device, we also compute the transpose there 1761aac854edSJunchao Zhang // TODO: KK transpose_matrix() does not sort column indices, however cusparse requires sorted indices. We have to sort the indices, until KK provides finer control options. 1762aac854edSJunchao Zhang PetscCallCXX(transpose_matrix<ConstMatRowMapKokkosView, ConstMatColIdxKokkosView, ConstMatScalarKokkosView, MatRowMapKokkosView, MatColIdxKokkosView, MatScalarKokkosView, MatRowMapKokkosView, DefaultExecutionSpace>(n, n, factors->iL_d, 1763aac854edSJunchao Zhang factors->jL_d, factors->aL_d, 1764aac854edSJunchao Zhang factors->iLt_d, factors->jLt_d, 1765aac854edSJunchao Zhang factors->aLt_d)); 1766aac854edSJunchao Zhang PetscCallCXX(sort_crs_matrix<DefaultExecutionSpace, MatRowMapKokkosView, MatColIdxKokkosView, MatScalarKokkosView>(factors->iLt_d, factors->jLt_d, factors->aLt_d)); 1767aac854edSJunchao Zhang } 1768aac854edSJunchao Zhang PetscCallCXX(sptrsv_symbolic(&factors->khLt, factors->iLt_d, factors->jLt_d, factors->aLt_d)); 1769aac854edSJunchao Zhang } 1770aac854edSJunchao Zhang 177186a27549SJunchao Zhang factors->transpose_updated = PETSC_TRUE; 177286a27549SJunchao Zhang } 17733ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 177486a27549SJunchao Zhang } 177586a27549SJunchao Zhang 1776aac854edSJunchao Zhang // Solve Ax = b, with RAR = U^T D U, where R is the row (and col) permutation matrix on A. 1777aac854edSJunchao Zhang // R is represented by rowperm in factors. If R is identity (i.e, no reordering), then rowperm is empty. 1778aac854edSJunchao Zhang static PetscErrorCode MatSolve_SeqAIJKokkos_Cholesky(Mat A, Vec bb, Vec xx) 1779d71ae5a4SJacob Faibussowitsch { 1780aac854edSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 178186a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)A->spptr; 1782aac854edSJunchao Zhang PetscInt m = A->rmap->n; 1783aac854edSJunchao Zhang PetscScalarKokkosView D = factors->D_d; 1784aac854edSJunchao Zhang PetscScalarKokkosView X, Y, B; // alias 1785aac854edSJunchao Zhang ConstPetscScalarKokkosView b; 1786aac854edSJunchao Zhang PetscScalarKokkosView x; 1787aac854edSJunchao Zhang PetscIntKokkosView &rowperm = factors->rowperm; 1788aac854edSJunchao Zhang PetscBool identity = rowperm.extent(0) ? PETSC_FALSE : PETSC_TRUE; 178986a27549SJunchao Zhang 179086a27549SJunchao Zhang PetscFunctionBegin; 17919566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1792aac854edSJunchao Zhang PetscCall(MatSeqAIJKokkosSolveCheck(A)); // for UX = T 1793aac854edSJunchao Zhang PetscCall(MatSeqAIJKokkosTransposeSolveCheck(A)); // for U^T Y = B 1794aac854edSJunchao Zhang PetscCall(VecGetKokkosView(bb, &b)); 1795aac854edSJunchao Zhang PetscCall(VecGetKokkosViewWrite(xx, &x)); 1796aac854edSJunchao Zhang 1797aac854edSJunchao Zhang // Solve U^T Y = B 1798aac854edSJunchao Zhang if (identity) { // Reorder b with the row permutation 1799aac854edSJunchao Zhang B = PetscScalarKokkosView(const_cast<PetscScalar *>(b.data()), b.extent(0)); 1800aac854edSJunchao Zhang Y = factors->workVector; 1801aac854edSJunchao Zhang } else { 1802aac854edSJunchao Zhang B = factors->workVector; 1803aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { B(i) = b(rowperm(i)); })); 1804aac854edSJunchao Zhang Y = x; 1805aac854edSJunchao Zhang } 1806aac854edSJunchao Zhang PetscCallCXX(sptrsv_solve(exec, &factors->khUt, factors->iUt_d, factors->jUt_d, factors->aUt_d, B, Y)); 1807aac854edSJunchao Zhang 1808aac854edSJunchao Zhang // Solve diag(D) Y' = Y. 1809aac854edSJunchao Zhang // Actually just do Y' = Y*D since D is already inverted in MatCholeskyFactorNumeric_SeqAIJ(). It is basically a vector element-wise multiplication. 1810aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { Y(i) = Y(i) * D(i); })); 1811aac854edSJunchao Zhang 1812aac854edSJunchao Zhang // Solve UX = Y 1813aac854edSJunchao Zhang if (identity) { 1814aac854edSJunchao Zhang X = x; 1815aac854edSJunchao Zhang } else { 1816aac854edSJunchao Zhang X = factors->workVector; // B is not needed anymore 1817aac854edSJunchao Zhang } 1818aac854edSJunchao Zhang PetscCallCXX(sptrsv_solve(exec, &factors->khU, factors->iU_d, factors->jU_d, factors->aU_d, Y, X)); 1819aac854edSJunchao Zhang 1820aac854edSJunchao Zhang // Reorder X with the inverse column (row) permutation 1821aac854edSJunchao Zhang if (!identity) { 1822aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { x(rowperm(i)) = X(i); })); 1823aac854edSJunchao Zhang } 1824aac854edSJunchao Zhang 1825aac854edSJunchao Zhang PetscCall(VecRestoreKokkosView(bb, &b)); 1826aac854edSJunchao Zhang PetscCall(VecRestoreKokkosViewWrite(xx, &x)); 18279566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 18283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 182986a27549SJunchao Zhang } 183086a27549SJunchao Zhang 1831aac854edSJunchao Zhang // Solve Ax = b, with RAC = LU, where R and C are row and col permutation matrices on A respectively. 1832aac854edSJunchao Zhang // R and C are represented by rowperm and colperm in factors. 1833aac854edSJunchao Zhang // If R or C is identity (i.e, no reordering), then rowperm or colperm is empty. 1834aac854edSJunchao Zhang static PetscErrorCode MatSolve_SeqAIJKokkos_LU(Mat A, Vec bb, Vec xx) 1835d71ae5a4SJacob Faibussowitsch { 1836aac854edSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 183786a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)A->spptr; 1838aac854edSJunchao Zhang PetscInt m = A->rmap->n; 1839aac854edSJunchao Zhang PetscScalarKokkosView X, Y, B; // alias 1840aac854edSJunchao Zhang ConstPetscScalarKokkosView b; 1841aac854edSJunchao Zhang PetscScalarKokkosView x; 1842aac854edSJunchao Zhang PetscIntKokkosView &rowperm = factors->rowperm; 1843aac854edSJunchao Zhang PetscIntKokkosView &colperm = factors->colperm; 1844aac854edSJunchao Zhang PetscBool row_identity = rowperm.extent(0) ? PETSC_FALSE : PETSC_TRUE; 1845aac854edSJunchao Zhang PetscBool col_identity = colperm.extent(0) ? PETSC_FALSE : PETSC_TRUE; 184686a27549SJunchao Zhang 184786a27549SJunchao Zhang PetscFunctionBegin; 18489566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1849aac854edSJunchao Zhang PetscCall(MatSeqAIJKokkosSolveCheck(A)); 1850aac854edSJunchao Zhang PetscCall(VecGetKokkosView(bb, &b)); 1851aac854edSJunchao Zhang PetscCall(VecGetKokkosViewWrite(xx, &x)); 185286a27549SJunchao Zhang 1853aac854edSJunchao Zhang // Solve L Y = B (i.e., L (U C^- x) = R b). R b indicates applying the row permutation on b. 1854aac854edSJunchao Zhang if (row_identity) { 1855aac854edSJunchao Zhang B = PetscScalarKokkosView(const_cast<PetscScalar *>(b.data()), b.extent(0)); 1856aac854edSJunchao Zhang Y = factors->workVector; 1857aac854edSJunchao Zhang } else { 1858aac854edSJunchao Zhang B = factors->workVector; 1859aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { B(i) = b(rowperm(i)); })); 1860aac854edSJunchao Zhang Y = x; 1861aac854edSJunchao Zhang } 1862aac854edSJunchao Zhang PetscCallCXX(sptrsv_solve(exec, &factors->khL, factors->iL_d, factors->jL_d, factors->aL_d, B, Y)); 1863aac854edSJunchao Zhang 1864aac854edSJunchao Zhang // Solve U C^- x = Y 1865aac854edSJunchao Zhang if (col_identity) { 1866aac854edSJunchao Zhang X = x; 1867aac854edSJunchao Zhang } else { 1868aac854edSJunchao Zhang X = factors->workVector; 1869aac854edSJunchao Zhang } 1870aac854edSJunchao Zhang PetscCallCXX(sptrsv_solve(exec, &factors->khU, factors->iU_d, factors->jU_d, factors->aU_d, Y, X)); 1871aac854edSJunchao Zhang 1872aac854edSJunchao Zhang // x = C X; Reorder X with the inverse col permutation 1873aac854edSJunchao Zhang if (!col_identity) { 1874aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { x(colperm(i)) = X(i); })); 1875aac854edSJunchao Zhang } 1876aac854edSJunchao Zhang 1877aac854edSJunchao Zhang PetscCall(VecRestoreKokkosView(bb, &b)); 1878aac854edSJunchao Zhang PetscCall(VecRestoreKokkosViewWrite(xx, &x)); 18799566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 18803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 188186a27549SJunchao Zhang } 188286a27549SJunchao Zhang 1883aac854edSJunchao Zhang // Solve A^T x = b, with RAC = LU, where R and C are row and col permutation matrices on A respectively. 1884aac854edSJunchao Zhang // R and C are represented by rowperm and colperm in factors. 1885aac854edSJunchao Zhang // If R or C is identity (i.e, no reordering), then rowperm or colperm is empty. 1886aac854edSJunchao Zhang // A = R^-1 L U C^-1, so A^T = C^-T U^T L^T R^-T. But since C^- = C^T, R^- = R^T, we have A^T = C U^T L^T R. 1887aac854edSJunchao Zhang static PetscErrorCode MatSolveTranspose_SeqAIJKokkos_LU(Mat A, Vec bb, Vec xx) 1888aac854edSJunchao Zhang { 1889aac854edSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 1890aac854edSJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)A->spptr; 1891aac854edSJunchao Zhang PetscInt m = A->rmap->n; 1892aac854edSJunchao Zhang PetscScalarKokkosView X, Y, B; // alias 1893aac854edSJunchao Zhang ConstPetscScalarKokkosView b; 1894aac854edSJunchao Zhang PetscScalarKokkosView x; 1895aac854edSJunchao Zhang PetscIntKokkosView &rowperm = factors->rowperm; 1896aac854edSJunchao Zhang PetscIntKokkosView &colperm = factors->colperm; 1897aac854edSJunchao Zhang PetscBool row_identity = rowperm.extent(0) ? PETSC_FALSE : PETSC_TRUE; 1898aac854edSJunchao Zhang PetscBool col_identity = colperm.extent(0) ? PETSC_FALSE : PETSC_TRUE; 1899aac854edSJunchao Zhang 1900aac854edSJunchao Zhang PetscFunctionBegin; 1901aac854edSJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 1902aac854edSJunchao Zhang PetscCall(MatSeqAIJKokkosTransposeSolveCheck(A)); // Update L^T, U^T if needed, and do sptrsv symbolic for L^T, U^T 1903aac854edSJunchao Zhang PetscCall(VecGetKokkosView(bb, &b)); 1904aac854edSJunchao Zhang PetscCall(VecGetKokkosViewWrite(xx, &x)); 1905aac854edSJunchao Zhang 1906aac854edSJunchao Zhang // Solve U^T Y = B (i.e., U^T (L^T R x) = C^- b). Note C^- b = C^T b, which means applying the column permutation on b. 1907aac854edSJunchao Zhang if (col_identity) { // Reorder b with the col permutation 1908aac854edSJunchao Zhang B = PetscScalarKokkosView(const_cast<PetscScalar *>(b.data()), b.extent(0)); 1909aac854edSJunchao Zhang Y = factors->workVector; 1910aac854edSJunchao Zhang } else { 1911aac854edSJunchao Zhang B = factors->workVector; 1912aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { B(i) = b(colperm(i)); })); 1913aac854edSJunchao Zhang Y = x; 1914aac854edSJunchao Zhang } 1915aac854edSJunchao Zhang PetscCallCXX(sptrsv_solve(exec, &factors->khUt, factors->iUt_d, factors->jUt_d, factors->aUt_d, B, Y)); 1916aac854edSJunchao Zhang 1917aac854edSJunchao Zhang // Solve L^T X = Y 1918aac854edSJunchao Zhang if (row_identity) { 1919aac854edSJunchao Zhang X = x; 1920aac854edSJunchao Zhang } else { 1921aac854edSJunchao Zhang X = factors->workVector; 1922aac854edSJunchao Zhang } 1923aac854edSJunchao Zhang PetscCallCXX(sptrsv_solve(exec, &factors->khLt, factors->iLt_d, factors->jLt_d, factors->aLt_d, Y, X)); 1924aac854edSJunchao Zhang 1925aac854edSJunchao Zhang // x = R^- X = R^T X; Reorder X with the inverse row permutation 1926aac854edSJunchao Zhang if (!row_identity) { 1927aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { x(rowperm(i)) = X(i); })); 1928aac854edSJunchao Zhang } 1929aac854edSJunchao Zhang 1930aac854edSJunchao Zhang PetscCall(VecRestoreKokkosView(bb, &b)); 1931aac854edSJunchao Zhang PetscCall(VecRestoreKokkosViewWrite(xx, &x)); 1932aac854edSJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1933aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 1934aac854edSJunchao Zhang } 1935aac854edSJunchao Zhang 1936aac854edSJunchao Zhang static PetscErrorCode MatLUFactorNumeric_SeqAIJKokkos(Mat B, Mat A, const MatFactorInfo *info) 1937aac854edSJunchao Zhang { 1938aac854edSJunchao Zhang PetscFunctionBegin; 1939aac854edSJunchao Zhang PetscCall(MatSeqAIJKokkosSyncHost(A)); 1940aac854edSJunchao Zhang PetscCall(MatLUFactorNumeric_SeqAIJ(B, A, info)); 1941aac854edSJunchao Zhang 1942aac854edSJunchao Zhang if (!info->solveonhost) { // if solve on host, then we don't need to copy L, U to device 1943aac854edSJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)B->spptr; 1944aac854edSJunchao Zhang Mat_SeqAIJ *b = static_cast<Mat_SeqAIJ *>(B->data); 1945aac854edSJunchao Zhang const PetscInt *Bi = b->i, *Bj = b->j, *Bdiag = b->diag; 1946aac854edSJunchao Zhang const MatScalar *Ba = b->a; 1947aac854edSJunchao Zhang PetscInt m = B->rmap->n, n = B->cmap->n; 1948aac854edSJunchao Zhang 1949aac854edSJunchao Zhang if (factors->iL_h.extent(0) == 0) { // Allocate memory and copy the L, U structure for the first time 1950aac854edSJunchao Zhang // Allocate memory and copy the structure 1951aac854edSJunchao Zhang factors->iL_h = MatRowMapKokkosViewHost(NoInit("iL_h"), m + 1); 1952aac854edSJunchao Zhang factors->jL_h = MatColIdxKokkosViewHost(NoInit("jL_h"), (Bi[m] - Bi[0]) + m); // + the diagonal entries 1953aac854edSJunchao Zhang factors->aL_h = MatScalarKokkosViewHost(NoInit("aL_h"), (Bi[m] - Bi[0]) + m); 1954aac854edSJunchao Zhang factors->iU_h = MatRowMapKokkosViewHost(NoInit("iU_h"), m + 1); 1955aac854edSJunchao Zhang factors->jU_h = MatColIdxKokkosViewHost(NoInit("jU_h"), (Bdiag[0] - Bdiag[m])); 1956aac854edSJunchao Zhang factors->aU_h = MatScalarKokkosViewHost(NoInit("aU_h"), (Bdiag[0] - Bdiag[m])); 1957aac854edSJunchao Zhang 1958aac854edSJunchao Zhang PetscInt *Li = factors->iL_h.data(); 1959aac854edSJunchao Zhang PetscInt *Lj = factors->jL_h.data(); 1960aac854edSJunchao Zhang PetscInt *Ui = factors->iU_h.data(); 1961aac854edSJunchao Zhang PetscInt *Uj = factors->jU_h.data(); 1962aac854edSJunchao Zhang 1963aac854edSJunchao Zhang Li[0] = Ui[0] = 0; 1964aac854edSJunchao Zhang for (PetscInt i = 0; i < m; i++) { 1965aac854edSJunchao Zhang PetscInt llen = Bi[i + 1] - Bi[i]; // exclusive of the diagonal entry 1966aac854edSJunchao Zhang PetscInt ulen = Bdiag[i] - Bdiag[i + 1]; // inclusive of the diagonal entry 1967aac854edSJunchao Zhang 1968aac854edSJunchao Zhang PetscArraycpy(Lj + Li[i], Bj + Bi[i], llen); // entries of L on the left of the diagonal 1969aac854edSJunchao Zhang Lj[Li[i] + llen] = i; // diagonal entry of L 1970aac854edSJunchao Zhang 1971aac854edSJunchao Zhang Uj[Ui[i]] = i; // diagonal entry of U 1972aac854edSJunchao Zhang PetscArraycpy(Uj + Ui[i] + 1, Bj + Bdiag[i + 1] + 1, ulen - 1); // entries of U on the right of the diagonal 1973aac854edSJunchao Zhang 1974aac854edSJunchao Zhang Li[i + 1] = Li[i] + llen + 1; 1975aac854edSJunchao Zhang Ui[i + 1] = Ui[i] + ulen; 1976aac854edSJunchao Zhang } 1977aac854edSJunchao Zhang 1978aac854edSJunchao Zhang factors->iL_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->iL_h); 1979aac854edSJunchao Zhang factors->jL_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->jL_h); 1980aac854edSJunchao Zhang factors->iU_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->iU_h); 1981aac854edSJunchao Zhang factors->jU_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->jU_h); 1982aac854edSJunchao Zhang factors->aL_d = Kokkos::create_mirror_view(DefaultMemorySpace(), factors->aL_h); 1983aac854edSJunchao Zhang factors->aU_d = Kokkos::create_mirror_view(DefaultMemorySpace(), factors->aU_h); 1984aac854edSJunchao Zhang 1985aac854edSJunchao Zhang // Copy row/col permutation to device 1986aac854edSJunchao Zhang IS rowperm = ((Mat_SeqAIJ *)B->data)->row; 1987aac854edSJunchao Zhang PetscBool row_identity; 1988aac854edSJunchao Zhang PetscCall(ISIdentity(rowperm, &row_identity)); 1989aac854edSJunchao Zhang if (!row_identity) { 1990aac854edSJunchao Zhang const PetscInt *ip; 1991aac854edSJunchao Zhang 1992aac854edSJunchao Zhang PetscCall(ISGetIndices(rowperm, &ip)); 1993aac854edSJunchao Zhang factors->rowperm = PetscIntKokkosView(NoInit("rowperm"), m); 1994aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->rowperm, PetscIntKokkosViewHost(const_cast<PetscInt *>(ip), m))); 1995aac854edSJunchao Zhang PetscCall(ISRestoreIndices(rowperm, &ip)); 1996aac854edSJunchao Zhang PetscCall(PetscLogCpuToGpu(m * sizeof(PetscInt))); 1997aac854edSJunchao Zhang } 1998aac854edSJunchao Zhang 1999aac854edSJunchao Zhang IS colperm = ((Mat_SeqAIJ *)B->data)->col; 2000aac854edSJunchao Zhang PetscBool col_identity; 2001aac854edSJunchao Zhang PetscCall(ISIdentity(colperm, &col_identity)); 2002aac854edSJunchao Zhang if (!col_identity) { 2003aac854edSJunchao Zhang const PetscInt *ip; 2004aac854edSJunchao Zhang 2005aac854edSJunchao Zhang PetscCall(ISGetIndices(colperm, &ip)); 2006aac854edSJunchao Zhang factors->colperm = PetscIntKokkosView(NoInit("colperm"), n); 2007aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->colperm, PetscIntKokkosViewHost(const_cast<PetscInt *>(ip), n))); 2008aac854edSJunchao Zhang PetscCall(ISRestoreIndices(colperm, &ip)); 2009aac854edSJunchao Zhang PetscCall(PetscLogCpuToGpu(n * sizeof(PetscInt))); 2010aac854edSJunchao Zhang } 2011aac854edSJunchao Zhang 2012aac854edSJunchao Zhang /* Create sptrsv handles for L, U and their transpose */ 2013aac854edSJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE) 2014aac854edSJunchao Zhang auto sptrsv_alg = SPTRSVAlgorithm::SPTRSV_CUSPARSE; 2015aac854edSJunchao Zhang #else 2016aac854edSJunchao Zhang auto sptrsv_alg = SPTRSVAlgorithm::SEQLVLSCHD_TP1; 2017aac854edSJunchao Zhang #endif 2018aac854edSJunchao Zhang factors->khL.create_sptrsv_handle(sptrsv_alg, m, true /* L is lower tri */); 2019aac854edSJunchao Zhang factors->khU.create_sptrsv_handle(sptrsv_alg, m, false /* U is not lower tri */); 2020aac854edSJunchao Zhang factors->khLt.create_sptrsv_handle(sptrsv_alg, m, false /* L^T is not lower tri */); 2021aac854edSJunchao Zhang factors->khUt.create_sptrsv_handle(sptrsv_alg, m, true /* U^T is lower tri */); 2022aac854edSJunchao Zhang } 2023aac854edSJunchao Zhang 2024aac854edSJunchao Zhang // Copy the value 2025aac854edSJunchao Zhang for (PetscInt i = 0; i < m; i++) { 2026aac854edSJunchao Zhang PetscInt llen = Bi[i + 1] - Bi[i]; 2027aac854edSJunchao Zhang PetscInt ulen = Bdiag[i] - Bdiag[i + 1]; 2028aac854edSJunchao Zhang const PetscInt *Li = factors->iL_h.data(); 2029aac854edSJunchao Zhang const PetscInt *Ui = factors->iU_h.data(); 2030aac854edSJunchao Zhang 2031aac854edSJunchao Zhang PetscScalar *La = factors->aL_h.data(); 2032aac854edSJunchao Zhang PetscScalar *Ua = factors->aU_h.data(); 2033aac854edSJunchao Zhang 2034aac854edSJunchao Zhang PetscArraycpy(La + Li[i], Ba + Bi[i], llen); // entries of L 2035aac854edSJunchao Zhang La[Li[i] + llen] = 1.0; // diagonal entry 2036aac854edSJunchao Zhang 2037aac854edSJunchao Zhang Ua[Ui[i]] = 1.0 / Ba[Bdiag[i]]; // diagonal entry 2038aac854edSJunchao Zhang PetscArraycpy(Ua + Ui[i] + 1, Ba + Bdiag[i + 1] + 1, ulen - 1); // entries of U 2039aac854edSJunchao Zhang } 2040aac854edSJunchao Zhang 2041aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->aL_d, factors->aL_h)); 2042aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->aU_d, factors->aU_h)); 2043aac854edSJunchao Zhang // Once the factors' values have changed, we need to update their transpose and redo sptrsv symbolic 2044aac854edSJunchao Zhang factors->transpose_updated = PETSC_FALSE; 2045aac854edSJunchao Zhang factors->sptrsv_symbolic_completed = PETSC_FALSE; 2046aac854edSJunchao Zhang 2047aac854edSJunchao Zhang B->ops->solve = MatSolve_SeqAIJKokkos_LU; 2048aac854edSJunchao Zhang B->ops->solvetranspose = MatSolveTranspose_SeqAIJKokkos_LU; 2049aac854edSJunchao Zhang } 2050aac854edSJunchao Zhang 2051aac854edSJunchao Zhang B->ops->matsolve = NULL; 2052aac854edSJunchao Zhang B->ops->matsolvetranspose = NULL; 2053aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 2054aac854edSJunchao Zhang } 2055aac854edSJunchao Zhang 2056aac854edSJunchao Zhang static PetscErrorCode MatILUFactorNumeric_SeqAIJKokkos_ILU0(Mat B, Mat A, const MatFactorInfo *info) 2057d71ae5a4SJacob Faibussowitsch { 205886a27549SJunchao Zhang Mat_SeqAIJKokkos *aijkok = (Mat_SeqAIJKokkos *)A->spptr; 205986a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)B->spptr; 206086a27549SJunchao Zhang PetscInt fill_lev = info->levels; 206186a27549SJunchao Zhang 206286a27549SJunchao Zhang PetscFunctionBegin; 20639566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 2064aac854edSJunchao Zhang PetscCheck(!info->factoronhost, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "MatFactorInfo.factoronhost should be false"); 20659566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 2066076ba34aSJunchao Zhang 2067076ba34aSJunchao Zhang auto a_d = aijkok->a_dual.view_device(); 2068076ba34aSJunchao Zhang auto i_d = aijkok->i_dual.view_device(); 2069076ba34aSJunchao Zhang auto j_d = aijkok->j_dual.view_device(); 2070076ba34aSJunchao Zhang 2071aac854edSJunchao Zhang PetscCallCXX(spiluk_numeric(&factors->kh, fill_lev, i_d, j_d, a_d, factors->iL_d, factors->jL_d, factors->aL_d, factors->iU_d, factors->jU_d, factors->aU_d)); 207286a27549SJunchao Zhang 207386a27549SJunchao Zhang B->assembled = PETSC_TRUE; 207486a27549SJunchao Zhang B->preallocated = PETSC_TRUE; 2075aac854edSJunchao Zhang B->ops->solve = MatSolve_SeqAIJKokkos_LU; 2076aac854edSJunchao Zhang B->ops->solvetranspose = MatSolveTranspose_SeqAIJKokkos_LU; 207786a27549SJunchao Zhang B->ops->matsolve = NULL; 207886a27549SJunchao Zhang B->ops->matsolvetranspose = NULL; 207986a27549SJunchao Zhang 208086a27549SJunchao Zhang /* Once the factors' value changed, we need to update their transpose and sptrsv handle */ 208186a27549SJunchao Zhang factors->transpose_updated = PETSC_FALSE; 208286a27549SJunchao Zhang factors->sptrsv_symbolic_completed = PETSC_FALSE; 2083eeadb341SJunchao Zhang /* TODO: log flops, but how to know that? */ 20849566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 20853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 208686a27549SJunchao Zhang } 208786a27549SJunchao Zhang 2088aac854edSJunchao Zhang // Use KK's spiluk_symbolic() to do ILU0 symbolic factorization, with no row/col reordering 2089aac854edSJunchao Zhang static PetscErrorCode MatILUFactorSymbolic_SeqAIJKokkos_ILU0(Mat B, Mat A, IS, IS, const MatFactorInfo *info) 2090d71ae5a4SJacob Faibussowitsch { 209186a27549SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 209286a27549SJunchao Zhang Mat_SeqAIJ *b; 209386a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)B->spptr; 209486a27549SJunchao Zhang PetscInt fill_lev = info->levels; 209586a27549SJunchao Zhang PetscInt nnzA = ((Mat_SeqAIJ *)A->data)->nz, nnzL, nnzU; 209686a27549SJunchao Zhang PetscInt n = A->rmap->n; 209786a27549SJunchao Zhang 209886a27549SJunchao Zhang PetscFunctionBegin; 2099aac854edSJunchao Zhang PetscCheck(!info->factoronhost, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "MatFactorInfo's factoronhost should be false as we are doing it on device right now"); 21009566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 210186a27549SJunchao Zhang 210286a27549SJunchao Zhang /* Create a spiluk handle and then do symbolic factorization */ 210386a27549SJunchao Zhang nnzL = nnzU = PetscRealIntMultTruncate(info->fill, nnzA); 2104aac854edSJunchao Zhang factors->kh.create_spiluk_handle(SPILUKAlgorithm::SEQLVLSCHD_TP1, n, nnzL, nnzU); 210586a27549SJunchao Zhang 210686a27549SJunchao Zhang auto spiluk_handle = factors->kh.get_spiluk_handle(); 210786a27549SJunchao Zhang 210886a27549SJunchao Zhang Kokkos::realloc(factors->iL_d, n + 1); /* Free old arrays and realloc */ 210986a27549SJunchao Zhang Kokkos::realloc(factors->jL_d, spiluk_handle->get_nnzL()); 211086a27549SJunchao Zhang Kokkos::realloc(factors->iU_d, n + 1); 211186a27549SJunchao Zhang Kokkos::realloc(factors->jU_d, spiluk_handle->get_nnzU()); 211286a27549SJunchao Zhang 211386a27549SJunchao Zhang aijkok = (Mat_SeqAIJKokkos *)A->spptr; 2114076ba34aSJunchao Zhang auto i_d = aijkok->i_dual.view_device(); 2115076ba34aSJunchao Zhang auto j_d = aijkok->j_dual.view_device(); 2116aac854edSJunchao Zhang PetscCallCXX(spiluk_symbolic(&factors->kh, fill_lev, i_d, j_d, factors->iL_d, factors->jL_d, factors->iU_d, factors->jU_d)); 211786a27549SJunchao Zhang /* TODO: if spiluk_symbolic is asynchronous, do we need to sync before calling get_nnzL()? */ 211886a27549SJunchao Zhang 211986a27549SJunchao Zhang Kokkos::resize(factors->jL_d, spiluk_handle->get_nnzL()); /* Shrink or expand, and retain old value */ 212086a27549SJunchao Zhang Kokkos::resize(factors->jU_d, spiluk_handle->get_nnzU()); 212186a27549SJunchao Zhang Kokkos::realloc(factors->aL_d, spiluk_handle->get_nnzL()); /* No need to retain old value */ 212286a27549SJunchao Zhang Kokkos::realloc(factors->aU_d, spiluk_handle->get_nnzU()); 212386a27549SJunchao Zhang 212486a27549SJunchao Zhang /* TODO: add options to select sptrsv algorithms */ 212586a27549SJunchao Zhang /* Create sptrsv handles for L, U and their transpose */ 212686a27549SJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE) 2127aac854edSJunchao Zhang auto sptrsv_alg = SPTRSVAlgorithm::SPTRSV_CUSPARSE; 212886a27549SJunchao Zhang #else 2129aac854edSJunchao Zhang auto sptrsv_alg = SPTRSVAlgorithm::SEQLVLSCHD_TP1; 213086a27549SJunchao Zhang #endif 213186a27549SJunchao Zhang 213286a27549SJunchao Zhang factors->khL.create_sptrsv_handle(sptrsv_alg, n, true /* L is lower tri */); 213386a27549SJunchao Zhang factors->khU.create_sptrsv_handle(sptrsv_alg, n, false /* U is not lower tri */); 213486a27549SJunchao Zhang factors->khLt.create_sptrsv_handle(sptrsv_alg, n, false /* L^T is not lower tri */); 213586a27549SJunchao Zhang factors->khUt.create_sptrsv_handle(sptrsv_alg, n, true /* U^T is lower tri */); 213686a27549SJunchao Zhang 213786a27549SJunchao Zhang /* Fill fields of the factor matrix B */ 21389566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(B, MAT_SKIP_ALLOCATION, NULL)); 213986a27549SJunchao Zhang b = (Mat_SeqAIJ *)B->data; 214086a27549SJunchao Zhang b->nz = b->maxnz = spiluk_handle->get_nnzL() + spiluk_handle->get_nnzU(); 214186a27549SJunchao Zhang B->info.fill_ratio_given = info->fill; 2142a1e4e190SStefano Zampini B->info.fill_ratio_needed = nnzA > 0 ? ((PetscReal)b->nz) / ((PetscReal)nnzA) : 1.0; 214386a27549SJunchao Zhang 2144aac854edSJunchao Zhang B->ops->lufactornumeric = MatILUFactorNumeric_SeqAIJKokkos_ILU0; 21453ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2146930e68a5SMark Adams } 2147930e68a5SMark Adams 2148aac854edSJunchao Zhang static PetscErrorCode MatLUFactorSymbolic_SeqAIJKokkos(Mat B, Mat A, IS isrow, IS iscol, const MatFactorInfo *info) 2149aac854edSJunchao Zhang { 2150aac854edSJunchao Zhang PetscFunctionBegin; 2151aac854edSJunchao Zhang PetscCall(MatLUFactorSymbolic_SeqAIJ(B, A, isrow, iscol, info)); 2152aac854edSJunchao Zhang PetscCheck(!B->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr"); 2153aac854edSJunchao Zhang PetscCallCXX(B->spptr = new Mat_SeqAIJKokkosTriFactors(B->rmap->n)); 2154aac854edSJunchao Zhang B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJKokkos; 2155aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 2156aac854edSJunchao Zhang } 2157aac854edSJunchao Zhang 2158aac854edSJunchao Zhang static PetscErrorCode MatILUFactorSymbolic_SeqAIJKokkos(Mat B, Mat A, IS isrow, IS iscol, const MatFactorInfo *info) 2159aac854edSJunchao Zhang { 2160aac854edSJunchao Zhang PetscBool row_identity = PETSC_FALSE, col_identity = PETSC_FALSE; 2161aac854edSJunchao Zhang 2162aac854edSJunchao Zhang PetscFunctionBegin; 2163aac854edSJunchao Zhang if (!info->factoronhost) { 2164aac854edSJunchao Zhang PetscCall(ISIdentity(isrow, &row_identity)); 2165aac854edSJunchao Zhang PetscCall(ISIdentity(iscol, &col_identity)); 2166aac854edSJunchao Zhang } 2167aac854edSJunchao Zhang 2168aac854edSJunchao Zhang PetscCheck(!B->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr"); 2169aac854edSJunchao Zhang PetscCallCXX(B->spptr = new Mat_SeqAIJKokkosTriFactors(B->rmap->n)); 2170aac854edSJunchao Zhang 2171aac854edSJunchao Zhang if (!info->factoronhost && !info->levels && row_identity && col_identity) { // if level 0 and no reordering 2172aac854edSJunchao Zhang PetscCall(MatILUFactorSymbolic_SeqAIJKokkos_ILU0(B, A, isrow, iscol, info)); 2173aac854edSJunchao Zhang } else { 2174aac854edSJunchao Zhang PetscCall(MatILUFactorSymbolic_SeqAIJ(B, A, isrow, iscol, info)); // otherwise, use PETSc's ILU on host 2175aac854edSJunchao Zhang B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJKokkos; 2176aac854edSJunchao Zhang } 2177aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 2178aac854edSJunchao Zhang } 2179aac854edSJunchao Zhang 2180aac854edSJunchao Zhang static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJKokkos(Mat B, Mat A, const MatFactorInfo *info) 2181aac854edSJunchao Zhang { 2182aac854edSJunchao Zhang PetscFunctionBegin; 2183aac854edSJunchao Zhang PetscCall(MatSeqAIJKokkosSyncHost(A)); 2184aac854edSJunchao Zhang PetscCall(MatCholeskyFactorNumeric_SeqAIJ(B, A, info)); 2185aac854edSJunchao Zhang 2186aac854edSJunchao Zhang if (!info->solveonhost) { // if solve on host, then we don't need to copy L, U to device 2187aac854edSJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)B->spptr; 2188aac854edSJunchao Zhang Mat_SeqAIJ *b = static_cast<Mat_SeqAIJ *>(B->data); 2189aac854edSJunchao Zhang const PetscInt *Bi = b->i, *Bj = b->j, *Bdiag = b->diag; 2190aac854edSJunchao Zhang const MatScalar *Ba = b->a; 2191aac854edSJunchao Zhang PetscInt m = B->rmap->n; 2192aac854edSJunchao Zhang 2193aac854edSJunchao Zhang if (factors->iU_h.extent(0) == 0) { // First time of numeric factorization 2194aac854edSJunchao Zhang // Allocate memory and copy the structure 2195aac854edSJunchao Zhang factors->iU_h = PetscIntKokkosViewHost(const_cast<PetscInt *>(Bi), m + 1); // wrap Bi as iU_h 2196aac854edSJunchao Zhang factors->jU_h = MatColIdxKokkosViewHost(NoInit("jU_h"), Bi[m]); 2197aac854edSJunchao Zhang factors->aU_h = MatScalarKokkosViewHost(NoInit("aU_h"), Bi[m]); 2198aac854edSJunchao Zhang factors->D_h = MatScalarKokkosViewHost(NoInit("D_h"), m); 2199aac854edSJunchao Zhang factors->aU_d = Kokkos::create_mirror_view(DefaultMemorySpace(), factors->aU_h); 2200aac854edSJunchao Zhang factors->D_d = Kokkos::create_mirror_view(DefaultMemorySpace(), factors->D_h); 2201aac854edSJunchao Zhang 2202aac854edSJunchao Zhang // Build jU_h from the skewed Aj 2203aac854edSJunchao Zhang PetscInt *Uj = factors->jU_h.data(); 2204aac854edSJunchao Zhang for (PetscInt i = 0; i < m; i++) { 2205aac854edSJunchao Zhang PetscInt ulen = Bi[i + 1] - Bi[i]; 2206aac854edSJunchao Zhang Uj[Bi[i]] = i; // diagonal entry 2207aac854edSJunchao Zhang PetscCall(PetscArraycpy(Uj + Bi[i] + 1, Bj + Bi[i], ulen - 1)); // entries of U on the right of the diagonal 2208aac854edSJunchao Zhang } 2209aac854edSJunchao Zhang 2210aac854edSJunchao Zhang // Copy iU, jU to device 2211aac854edSJunchao Zhang PetscCallCXX(factors->iU_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->iU_h)); 2212aac854edSJunchao Zhang PetscCallCXX(factors->jU_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->jU_h)); 2213aac854edSJunchao Zhang 2214aac854edSJunchao Zhang // Copy row/col permutation to device 2215aac854edSJunchao Zhang IS rowperm = ((Mat_SeqAIJ *)B->data)->row; 2216aac854edSJunchao Zhang PetscBool row_identity; 2217aac854edSJunchao Zhang PetscCall(ISIdentity(rowperm, &row_identity)); 2218aac854edSJunchao Zhang if (!row_identity) { 2219aac854edSJunchao Zhang const PetscInt *ip; 2220aac854edSJunchao Zhang 2221aac854edSJunchao Zhang PetscCall(ISGetIndices(rowperm, &ip)); 2222aac854edSJunchao Zhang PetscCallCXX(factors->rowperm = PetscIntKokkosView(NoInit("rowperm"), m)); 2223aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->rowperm, PetscIntKokkosViewHost(const_cast<PetscInt *>(ip), m))); 2224aac854edSJunchao Zhang PetscCall(ISRestoreIndices(rowperm, &ip)); 2225aac854edSJunchao Zhang PetscCall(PetscLogCpuToGpu(m * sizeof(PetscInt))); 2226aac854edSJunchao Zhang } 2227aac854edSJunchao Zhang 2228aac854edSJunchao Zhang // Create sptrsv handles for U and U^T 2229aac854edSJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE) 2230aac854edSJunchao Zhang auto sptrsv_alg = SPTRSVAlgorithm::SPTRSV_CUSPARSE; 2231aac854edSJunchao Zhang #else 2232aac854edSJunchao Zhang auto sptrsv_alg = SPTRSVAlgorithm::SEQLVLSCHD_TP1; 2233aac854edSJunchao Zhang #endif 2234aac854edSJunchao Zhang factors->khU.create_sptrsv_handle(sptrsv_alg, m, false /* U is not lower tri */); 2235aac854edSJunchao Zhang factors->khUt.create_sptrsv_handle(sptrsv_alg, m, true /* U^T is lower tri */); 2236aac854edSJunchao Zhang } 2237aac854edSJunchao Zhang // These pointers were set MatCholeskyFactorNumeric_SeqAIJ(), so we always need to update them 2238aac854edSJunchao Zhang B->ops->solve = MatSolve_SeqAIJKokkos_Cholesky; 2239aac854edSJunchao Zhang B->ops->solvetranspose = MatSolve_SeqAIJKokkos_Cholesky; 2240aac854edSJunchao Zhang 2241aac854edSJunchao Zhang // Copy the value 2242aac854edSJunchao Zhang PetscScalar *Ua = factors->aU_h.data(); 2243aac854edSJunchao Zhang PetscScalar *D = factors->D_h.data(); 2244aac854edSJunchao Zhang for (PetscInt i = 0; i < m; i++) { 2245aac854edSJunchao Zhang D[i] = Ba[Bdiag[i]]; // actually Aa[Adiag[i]] is the inverse of the diagonal 2246aac854edSJunchao Zhang Ua[Bi[i]] = (PetscScalar)1.0; // set the unit diagonal for U 2247aac854edSJunchao Zhang for (PetscInt k = 0; k < Bi[i + 1] - Bi[i] - 1; k++) Ua[Bi[i] + 1 + k] = -Ba[Bi[i] + k]; 2248aac854edSJunchao Zhang } 2249aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->aU_d, factors->aU_h)); 2250aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->D_d, factors->D_h)); 2251aac854edSJunchao Zhang 2252aac854edSJunchao Zhang factors->sptrsv_symbolic_completed = PETSC_FALSE; // When numeric value changed, we must do these again 2253aac854edSJunchao Zhang factors->transpose_updated = PETSC_FALSE; 2254aac854edSJunchao Zhang } 2255aac854edSJunchao Zhang 2256aac854edSJunchao Zhang B->ops->matsolve = NULL; 2257aac854edSJunchao Zhang B->ops->matsolvetranspose = NULL; 2258aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 2259aac854edSJunchao Zhang } 2260aac854edSJunchao Zhang 2261aac854edSJunchao Zhang static PetscErrorCode MatICCFactorSymbolic_SeqAIJKokkos(Mat B, Mat A, IS perm, const MatFactorInfo *info) 2262aac854edSJunchao Zhang { 2263aac854edSJunchao Zhang PetscFunctionBegin; 2264aac854edSJunchao Zhang if (info->solveonhost) { 2265aac854edSJunchao Zhang // If solve on host, we have to change the type, as eventually we need to call MatSolve_SeqSBAIJ_1_NaturalOrdering() etc. 2266aac854edSJunchao Zhang PetscCall(MatSetType(B, MATSEQSBAIJ)); 2267aac854edSJunchao Zhang PetscCall(MatSeqSBAIJSetPreallocation(B, 1, MAT_SKIP_ALLOCATION, NULL)); 2268aac854edSJunchao Zhang } 2269aac854edSJunchao Zhang 2270aac854edSJunchao Zhang PetscCall(MatICCFactorSymbolic_SeqAIJ(B, A, perm, info)); 2271aac854edSJunchao Zhang 2272aac854edSJunchao Zhang if (!info->solveonhost) { 2273bfe80ac4SPierre Jolivet // If solve on device, B is still a MATSEQAIJKOKKOS, so we are good to allocate B->spptr 2274aac854edSJunchao Zhang PetscCheck(!B->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr"); 2275aac854edSJunchao Zhang PetscCallCXX(B->spptr = new Mat_SeqAIJKokkosTriFactors(B->rmap->n)); 2276aac854edSJunchao Zhang B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJKokkos; 2277aac854edSJunchao Zhang } 2278aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 2279aac854edSJunchao Zhang } 2280aac854edSJunchao Zhang 2281aac854edSJunchao Zhang static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJKokkos(Mat B, Mat A, IS perm, const MatFactorInfo *info) 2282aac854edSJunchao Zhang { 2283aac854edSJunchao Zhang PetscFunctionBegin; 2284aac854edSJunchao Zhang if (info->solveonhost) { 2285aac854edSJunchao Zhang // If solve on host, we have to change the type, as eventually we need to call MatSolve_SeqSBAIJ_1_NaturalOrdering() etc. 2286aac854edSJunchao Zhang PetscCall(MatSetType(B, MATSEQSBAIJ)); 2287aac854edSJunchao Zhang PetscCall(MatSeqSBAIJSetPreallocation(B, 1, MAT_SKIP_ALLOCATION, NULL)); 2288aac854edSJunchao Zhang } 2289aac854edSJunchao Zhang 2290aac854edSJunchao Zhang PetscCall(MatCholeskyFactorSymbolic_SeqAIJ(B, A, perm, info)); // it sets B's two ISes ((Mat_SeqAIJ*)B->data)->{row, col} to perm 2291aac854edSJunchao Zhang 2292aac854edSJunchao Zhang if (!info->solveonhost) { 2293bfe80ac4SPierre Jolivet // If solve on device, B is still a MATSEQAIJKOKKOS, so we are good to allocate B->spptr 2294aac854edSJunchao Zhang PetscCheck(!B->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr"); 2295aac854edSJunchao Zhang PetscCallCXX(B->spptr = new Mat_SeqAIJKokkosTriFactors(B->rmap->n)); 2296aac854edSJunchao Zhang B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJKokkos; 2297aac854edSJunchao Zhang } 2298aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 2299aac854edSJunchao Zhang } 2300aac854edSJunchao Zhang 2301aac854edSJunchao Zhang // The _Kokkos suffix means we will use Kokkos as a solver for the SeqAIJKokkos matrix 2302aac854edSJunchao Zhang static PetscErrorCode MatFactorGetSolverType_SeqAIJKokkos_Kokkos(Mat A, MatSolverType *type) 2303d71ae5a4SJacob Faibussowitsch { 2304930e68a5SMark Adams PetscFunctionBegin; 2305930e68a5SMark Adams *type = MATSOLVERKOKKOS; 23063ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2307930e68a5SMark Adams } 2308930e68a5SMark Adams 2309930e68a5SMark Adams /*MC 231086a27549SJunchao Zhang MATSOLVERKOKKOS = "Kokkos" - A matrix solver type providing triangular solvers for sequential matrices 231111a5261eSBarry Smith on a single GPU of type, `MATSEQAIJKOKKOS`, `MATAIJKOKKOS`. 2312930e68a5SMark Adams 2313930e68a5SMark Adams Level: beginner 2314930e68a5SMark Adams 23151cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `PCFactorSetMatSolverType()`, `MatSolverType`, `MatCreateSeqAIJKokkos()`, `MATAIJKOKKOS`, `MatKokkosSetFormat()`, `MatKokkosStorageFormat`, `MatKokkosFormatOperation` 2316930e68a5SMark Adams M*/ 231786a27549SJunchao Zhang PETSC_EXTERN PetscErrorCode MatGetFactor_SeqAIJKokkos_Kokkos(Mat A, MatFactorType ftype, Mat *B) /* MatGetFactor_<MatType>_<MatSolverType> */ 2318930e68a5SMark Adams { 2319930e68a5SMark Adams PetscInt n = A->rmap->n; 2320aac854edSJunchao Zhang MPI_Comm comm; 2321930e68a5SMark Adams 2322930e68a5SMark Adams PetscFunctionBegin; 2323aac854edSJunchao Zhang PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 2324aac854edSJunchao Zhang PetscCall(MatCreate(comm, B)); 23259566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*B, n, n, n, n)); 2326aac854edSJunchao Zhang PetscCall(MatSetBlockSizesFromMats(*B, A, A)); 2327930e68a5SMark Adams (*B)->factortype = ftype; 23289566063dSJacob Faibussowitsch PetscCall(MatSetType(*B, MATSEQAIJKOKKOS)); 23299566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation(*B, MAT_SKIP_ALLOCATION, NULL)); 2330aac854edSJunchao Zhang PetscCheck(!(*B)->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr"); 2331aac854edSJunchao Zhang 2332aac854edSJunchao Zhang if (ftype == MAT_FACTOR_LU || ftype == MAT_FACTOR_ILU || ftype == MAT_FACTOR_ILUDT) { 2333aac854edSJunchao Zhang (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJKokkos; 2334aac854edSJunchao Zhang (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJKokkos; 2335aac854edSJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGND, (char **)&(*B)->preferredordering[MAT_FACTOR_LU])); 2336aac854edSJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGNATURAL, (char **)&(*B)->preferredordering[MAT_FACTOR_ILU])); 2337aac854edSJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGNATURAL, (char **)&(*B)->preferredordering[MAT_FACTOR_ILUDT])); 2338aac854edSJunchao Zhang } else if (ftype == MAT_FACTOR_CHOLESKY || ftype == MAT_FACTOR_ICC) { 2339aac854edSJunchao Zhang (*B)->ops->iccfactorsymbolic = MatICCFactorSymbolic_SeqAIJKokkos; 2340aac854edSJunchao Zhang (*B)->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SeqAIJKokkos; 2341aac854edSJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGND, (char **)&(*B)->preferredordering[MAT_FACTOR_CHOLESKY])); 2342aac854edSJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGNATURAL, (char **)&(*B)->preferredordering[MAT_FACTOR_ICC])); 2343aac854edSJunchao Zhang } else SETERRQ(comm, PETSC_ERR_SUP, "MatFactorType %s is not supported by MatType SeqAIJKokkos", MatFactorTypes[ftype]); 2344aac854edSJunchao Zhang 2345aac854edSJunchao Zhang // The factorization can use the ordering provided in MatLUFactorSymbolic(), MatCholeskyFactorSymbolic() etc, though we do it on host 2346aac854edSJunchao Zhang (*B)->canuseordering = PETSC_TRUE; 2347aac854edSJunchao Zhang PetscCall(PetscObjectComposeFunction((PetscObject)*B, "MatFactorGetSolverType_C", MatFactorGetSolverType_SeqAIJKokkos_Kokkos)); 23483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2349930e68a5SMark Adams } 23508f7e8f9dSMark Adams 2351aac854edSJunchao Zhang PETSC_INTERN PetscErrorCode MatSolverTypeRegister_Kokkos(void) 2352d71ae5a4SJacob Faibussowitsch { 235386a27549SJunchao Zhang PetscFunctionBegin; 23549566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS, MATSEQAIJKOKKOS, MAT_FACTOR_LU, MatGetFactor_SeqAIJKokkos_Kokkos)); 2355aac854edSJunchao Zhang PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS, MATSEQAIJKOKKOS, MAT_FACTOR_CHOLESKY, MatGetFactor_SeqAIJKokkos_Kokkos)); 23569566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS, MATSEQAIJKOKKOS, MAT_FACTOR_ILU, MatGetFactor_SeqAIJKokkos_Kokkos)); 2357aac854edSJunchao Zhang PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS, MATSEQAIJKOKKOS, MAT_FACTOR_ICC, MatGetFactor_SeqAIJKokkos_Kokkos)); 23583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 235986a27549SJunchao Zhang } 236086a27549SJunchao Zhang 2361076ba34aSJunchao Zhang /* Utility to print out a KokkosCsrMatrix for debugging */ 2362d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode PrintCsrMatrix(const KokkosCsrMatrix &csrmat) 2363d71ae5a4SJacob Faibussowitsch { 236445402d8aSJunchao Zhang const auto &iv = Kokkos::create_mirror_view_and_copy(HostMirrorMemorySpace(), csrmat.graph.row_map); 236545402d8aSJunchao Zhang const auto &jv = Kokkos::create_mirror_view_and_copy(HostMirrorMemorySpace(), csrmat.graph.entries); 236645402d8aSJunchao Zhang const auto &av = Kokkos::create_mirror_view_and_copy(HostMirrorMemorySpace(), csrmat.values); 2367076ba34aSJunchao Zhang const PetscInt *i = iv.data(); 2368076ba34aSJunchao Zhang const PetscInt *j = jv.data(); 2369076ba34aSJunchao Zhang const PetscScalar *a = av.data(); 2370076ba34aSJunchao Zhang PetscInt m = csrmat.numRows(), n = csrmat.numCols(), nnz = csrmat.nnz(); 2371076ba34aSJunchao Zhang 2372076ba34aSJunchao Zhang PetscFunctionBegin; 23739566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF, "%" PetscInt_FMT " x %" PetscInt_FMT " SeqAIJKokkos, with %" PetscInt_FMT " nonzeros\n", m, n, nnz)); 2374076ba34aSJunchao Zhang for (PetscInt k = 0; k < m; k++) { 23759566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF, "%" PetscInt_FMT ": ", k)); 237648a46eb9SPierre Jolivet for (PetscInt p = i[k]; p < i[k + 1]; p++) PetscCall(PetscPrintf(PETSC_COMM_SELF, "%" PetscInt_FMT "(%.1f), ", j[p], (double)PetscRealPart(a[p]))); 23779566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF, "\n")); 2378076ba34aSJunchao Zhang } 23793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2380076ba34aSJunchao Zhang } 2381