xref: /petsc/src/mat/impls/aij/seq/kokkos/aijkok.kokkos.cxx (revision 5519a0895b8034b493ccf761a8c40841d5ab0adc)
111d22bbfSJunchao Zhang #include <petscvec_kokkos.hpp>
2076ba34aSJunchao Zhang #include <petscpkg_version.h>
3152b3e56SJunchao Zhang #include <petsc/private/petscimpl.h>
442550becSJunchao Zhang #include <petsc/private/sfimpl.h>
58c3ff71bSJunchao Zhang #include <petscsystypes.h>
68c3ff71bSJunchao Zhang #include <petscerror.h>
78c3ff71bSJunchao Zhang 
88c3ff71bSJunchao Zhang #include <Kokkos_Core.hpp>
9f0cf5187SStefano Zampini #include <KokkosBlas.hpp>
10076ba34aSJunchao Zhang #include <KokkosKernels_Sorting.hpp>
118c3ff71bSJunchao Zhang #include <KokkosSparse_CrsMatrix.hpp>
128c3ff71bSJunchao Zhang #include <KokkosSparse_spmv.hpp>
1386a27549SJunchao Zhang #include <KokkosSparse_spiluk.hpp>
1486a27549SJunchao Zhang #include <KokkosSparse_sptrsv.hpp>
15076ba34aSJunchao Zhang #include <KokkosSparse_spgemm.hpp>
16076ba34aSJunchao Zhang #include <KokkosSparse_spadd.hpp>
1786a27549SJunchao Zhang 
1842550becSJunchao Zhang #include <../src/mat/impls/aij/seq/kokkos/aijkok.hpp>
198c3ff71bSJunchao Zhang 
208c3ff71bSJunchao Zhang static PetscErrorCode MatSetOps_SeqAIJKokkos(Mat); /* Forward declaration */
218c3ff71bSJunchao Zhang 
22076ba34aSJunchao Zhang /* MatAssemblyEnd_SeqAIJKokkos() happens when we finalized nonzeros of the matrix, either after
23076ba34aSJunchao Zhang    we assembled the matrix on host, or after we directly produced the matrix data on device (ex., through MatMatMult).
24076ba34aSJunchao Zhang    In the latter case, it is important to set a_dual's sync state correctly.
25076ba34aSJunchao Zhang  */
268c3ff71bSJunchao Zhang static PetscErrorCode MatAssemblyEnd_SeqAIJKokkos(Mat A,MatAssemblyType mode)
278c3ff71bSJunchao Zhang {
28076ba34aSJunchao Zhang   Mat_SeqAIJ       *aijseq;
29076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok;
308c3ff71bSJunchao Zhang 
318c3ff71bSJunchao Zhang   PetscFunctionBegin;
32076ba34aSJunchao Zhang   if (mode == MAT_FLUSH_ASSEMBLY) PetscFunctionReturn(0);
339566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd_SeqAIJ(A,mode));
34076ba34aSJunchao Zhang 
35076ba34aSJunchao Zhang   aijseq = static_cast<Mat_SeqAIJ*>(A->data);
36076ba34aSJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
37076ba34aSJunchao Zhang 
38076ba34aSJunchao Zhang   /* If aijkok does not exist, we just copy i, j to device.
39076ba34aSJunchao Zhang      If aijkok already exists, but the device's nonzero pattern does not match with the host's, we assume the latest data is on host.
40076ba34aSJunchao Zhang      In both cases, we build a new aijkok structure.
41076ba34aSJunchao Zhang   */
42076ba34aSJunchao Zhang   if (!aijkok || aijkok->nonzerostate != A->nonzerostate) { /* aijkok might not exist yet or nonzero pattern has changed */
43076ba34aSJunchao Zhang     delete aijkok;
44076ba34aSJunchao Zhang     aijkok   = new Mat_SeqAIJKokkos(A->rmap->n,A->cmap->n,aijseq->nz,aijseq->i,aijseq->j,aijseq->a,A->nonzerostate,PETSC_FALSE/*don't copy mat values to device*/);
45076ba34aSJunchao Zhang     A->spptr = aijkok;
46076ba34aSJunchao Zhang   }
47076ba34aSJunchao Zhang 
48*5519a089SJose E. Roman   if (aijkok->device_mat_d.data()) {
49a587d139SMark     A->offloadmask = PETSC_OFFLOAD_GPU; // in GPU mode, no going back. MatSetValues checks this
50a587d139SMark   }
518c3ff71bSJunchao Zhang   PetscFunctionReturn(0);
528c3ff71bSJunchao Zhang }
538c3ff71bSJunchao Zhang 
5486a27549SJunchao Zhang /* Sync CSR data to device if not yet */
55076ba34aSJunchao Zhang PETSC_INTERN PetscErrorCode MatSeqAIJKokkosSyncDevice(Mat A)
568c3ff71bSJunchao Zhang {
578c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
588c3ff71bSJunchao Zhang 
598c3ff71bSJunchao Zhang   PetscFunctionBegin;
605f80ce2aSJacob Faibussowitsch   PetscCheck(A->factortype == MAT_FACTOR_NONE,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Cann't sync factorized matrix from host to device");
615f80ce2aSJacob Faibussowitsch   PetscCheck(aijkok,PETSC_COMM_WORLD,PETSC_ERR_PLIB,"Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr");
62076ba34aSJunchao Zhang   if (aijkok->a_dual.need_sync_device()) {
63076ba34aSJunchao Zhang     aijkok->a_dual.sync_device();
64580c7c76SPierre Jolivet     aijkok->transpose_updated = PETSC_FALSE; /* values of the transpose is out-of-date */
6586a27549SJunchao Zhang     aijkok->hermitian_updated = PETSC_FALSE;
668c3ff71bSJunchao Zhang   }
678c3ff71bSJunchao Zhang   PetscFunctionReturn(0);
688c3ff71bSJunchao Zhang }
698c3ff71bSJunchao Zhang 
70076ba34aSJunchao Zhang /* Mark the CSR data on device as modified */
71fc76dfabSMark Adams PETSC_INTERN PetscErrorCode MatSeqAIJKokkosModifyDevice(Mat A)
7286a27549SJunchao Zhang {
7386a27549SJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
7486a27549SJunchao Zhang 
7586a27549SJunchao Zhang   PetscFunctionBegin;
765f80ce2aSJacob Faibussowitsch   PetscCheck(A->factortype == MAT_FACTOR_NONE,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Not supported for factorized matries");
7786a27549SJunchao Zhang   aijkok->a_dual.clear_sync_state();
7886a27549SJunchao Zhang   aijkok->a_dual.modify_device();
7986a27549SJunchao Zhang   aijkok->transpose_updated = PETSC_FALSE;
8086a27549SJunchao Zhang   aijkok->hermitian_updated = PETSC_FALSE;
819566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJInvalidateDiagonal(A));
829566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
8386a27549SJunchao Zhang   PetscFunctionReturn(0);
8486a27549SJunchao Zhang }
8586a27549SJunchao Zhang 
86f0cf5187SStefano Zampini static PetscErrorCode MatSeqAIJKokkosSyncHost(Mat A)
87f0cf5187SStefano Zampini {
88f0cf5187SStefano Zampini   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
89f0cf5187SStefano Zampini 
90f0cf5187SStefano Zampini   PetscFunctionBegin;
91f0cf5187SStefano Zampini   PetscCheckTypeName(A,MATSEQAIJKOKKOS);
9286a27549SJunchao Zhang   /* We do not expect one needs factors on host  */
935f80ce2aSJacob Faibussowitsch   PetscCheck(A->factortype == MAT_FACTOR_NONE,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Cann't sync factorized matrix from device to host");
945f80ce2aSJacob Faibussowitsch   PetscCheck(aijkok,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing AIJKOK");
95076ba34aSJunchao Zhang   aijkok->a_dual.sync_host();
96f0cf5187SStefano Zampini   PetscFunctionReturn(0);
97f0cf5187SStefano Zampini }
98f0cf5187SStefano Zampini 
99f0cf5187SStefano Zampini static PetscErrorCode MatSeqAIJGetArray_SeqAIJKokkos(Mat A,PetscScalar *array[])
100f0cf5187SStefano Zampini {
101076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
102f0cf5187SStefano Zampini 
103f0cf5187SStefano Zampini   PetscFunctionBegin;
104*5519a089SJose E. Roman   /* aijkok contains valid pointers only if the host's nonzerostate matches with the device's.
105*5519a089SJose E. Roman     Calling MatSeqAIJSetPreallocation() or MatSetValues() on host, where aijseq->{i,j,a} might be
106*5519a089SJose E. Roman     reallocated, will lead to stale {i,j,a}_dual in aijkok. In both operations, the hosts's nonzerostate
107*5519a089SJose E. Roman     must have been updated. The stale aijkok will be rebuilt during MatAssemblyEnd.
108*5519a089SJose E. Roman   */
109*5519a089SJose E. Roman   if (aijkok && A->nonzerostate == aijkok->nonzerostate) {
110076ba34aSJunchao Zhang     aijkok->a_dual.sync_host();
111076ba34aSJunchao Zhang     *array = aijkok->a_dual.view_host().data();
112076ba34aSJunchao Zhang   } else { /* Happens when calling MatSetValues on a newly created matrix */
113076ba34aSJunchao Zhang     *array = static_cast<Mat_SeqAIJ*>(A->data)->a;
114076ba34aSJunchao Zhang   }
115076ba34aSJunchao Zhang   PetscFunctionReturn(0);
116076ba34aSJunchao Zhang }
117076ba34aSJunchao Zhang 
118076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJRestoreArray_SeqAIJKokkos(Mat A,PetscScalar *array[])
119076ba34aSJunchao Zhang {
120076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
121076ba34aSJunchao Zhang 
122076ba34aSJunchao Zhang   PetscFunctionBegin;
123*5519a089SJose E. Roman   if (aijkok && A->nonzerostate == aijkok->nonzerostate) aijkok->a_dual.modify_host();
124076ba34aSJunchao Zhang   PetscFunctionReturn(0);
125076ba34aSJunchao Zhang }
126076ba34aSJunchao Zhang 
127076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJGetArrayRead_SeqAIJKokkos(Mat A,const PetscScalar *array[])
128076ba34aSJunchao Zhang {
129076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
130076ba34aSJunchao Zhang 
131076ba34aSJunchao Zhang   PetscFunctionBegin;
132*5519a089SJose E. Roman   if (aijkok && A->nonzerostate == aijkok->nonzerostate) {
133076ba34aSJunchao Zhang     aijkok->a_dual.sync_host();
134076ba34aSJunchao Zhang     *array = aijkok->a_dual.view_host().data();
1352328674fSJunchao Zhang   } else {
1362328674fSJunchao Zhang     *array = static_cast<Mat_SeqAIJ*>(A->data)->a;
1372328674fSJunchao Zhang   }
138076ba34aSJunchao Zhang   PetscFunctionReturn(0);
139076ba34aSJunchao Zhang }
140076ba34aSJunchao Zhang 
141076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJRestoreArrayRead_SeqAIJKokkos(Mat A,const PetscScalar *array[])
142076ba34aSJunchao Zhang {
143076ba34aSJunchao Zhang   PetscFunctionBegin;
144076ba34aSJunchao Zhang   *array = NULL;
145076ba34aSJunchao Zhang   PetscFunctionReturn(0);
146076ba34aSJunchao Zhang }
147076ba34aSJunchao Zhang 
148076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJGetArrayWrite_SeqAIJKokkos(Mat A,PetscScalar *array[])
149076ba34aSJunchao Zhang {
150076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
151076ba34aSJunchao Zhang 
152076ba34aSJunchao Zhang   PetscFunctionBegin;
153*5519a089SJose E. Roman   if (aijkok && A->nonzerostate == aijkok->nonzerostate) {
154076ba34aSJunchao Zhang     *array = aijkok->a_dual.view_host().data();
1552328674fSJunchao Zhang   } else { /* Ex. happens with MatZeroEntries on a preallocated but not assembled matrix */
1562328674fSJunchao Zhang     *array = static_cast<Mat_SeqAIJ*>(A->data)->a;
1572328674fSJunchao Zhang   }
158076ba34aSJunchao Zhang   PetscFunctionReturn(0);
159076ba34aSJunchao Zhang }
160076ba34aSJunchao Zhang 
161076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJRestoreArrayWrite_SeqAIJKokkos(Mat A,PetscScalar *array[])
162076ba34aSJunchao Zhang {
163076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
164076ba34aSJunchao Zhang 
165076ba34aSJunchao Zhang   PetscFunctionBegin;
166*5519a089SJose E. Roman   if (aijkok && A->nonzerostate == aijkok->nonzerostate) {
167076ba34aSJunchao Zhang     aijkok->a_dual.clear_sync_state();
168076ba34aSJunchao Zhang     aijkok->a_dual.modify_host();
1692328674fSJunchao Zhang   }
170f0cf5187SStefano Zampini   PetscFunctionReturn(0);
171f0cf5187SStefano Zampini }
172f0cf5187SStefano Zampini 
1737ee59b9bSJunchao Zhang static PetscErrorCode MatSeqAIJGetCSRAndMemType_SeqAIJKokkos(Mat A,const PetscInt **i,const PetscInt **j,PetscScalar **a,PetscMemType *mtype)
1747ee59b9bSJunchao Zhang {
1757ee59b9bSJunchao Zhang   Mat_SeqAIJKokkos  *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
1767ee59b9bSJunchao Zhang 
1777ee59b9bSJunchao Zhang   PetscFunctionBegin;
1787ee59b9bSJunchao Zhang   PetscCheck(aijkok != NULL,PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONGSTATE,"aijkok is NULL");
1797ee59b9bSJunchao Zhang 
1807ee59b9bSJunchao Zhang   if (i) *i = aijkok->i_device_data();
1817ee59b9bSJunchao Zhang   if (j) *j = aijkok->j_device_data();
1827ee59b9bSJunchao Zhang   if (a) {
1837ee59b9bSJunchao Zhang     aijkok->a_dual.sync_device();
1847ee59b9bSJunchao Zhang     *a = aijkok->a_device_data();
1857ee59b9bSJunchao Zhang   }
1867ee59b9bSJunchao Zhang   if (mtype) *mtype = PETSC_MEMTYPE_KOKKOS;
1877ee59b9bSJunchao Zhang   PetscFunctionReturn(0);
1887ee59b9bSJunchao Zhang }
1897ee59b9bSJunchao Zhang 
190a587d139SMark // MatSeqAIJKokkosSetDeviceMat takes a PetscSplitCSRDataStructure with device data and copies it to the device. Note, "deep_copy" here is really a shallow copy
191042217e8SBarry Smith PetscErrorCode MatSeqAIJKokkosSetDeviceMat(Mat A, PetscSplitCSRDataStructure h_mat)
192a587d139SMark {
193042217e8SBarry Smith   Mat_SeqAIJKokkos                             *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
194042217e8SBarry Smith   Kokkos::View<SplitCSRMat, Kokkos::HostSpace> h_mat_k(h_mat);
195a587d139SMark 
196a587d139SMark   PetscFunctionBegin;
1975f80ce2aSJacob Faibussowitsch   PetscCheck(aijkok,PETSC_COMM_WORLD,PETSC_ERR_PLIB,"Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr");
198152b3e56SJunchao Zhang   aijkok->device_mat_d = create_mirror(DefaultMemorySpace(),h_mat_k);
199a587d139SMark   Kokkos::deep_copy (aijkok->device_mat_d, h_mat_k);
200a587d139SMark   PetscFunctionReturn(0);
201a587d139SMark }
202a587d139SMark 
203a587d139SMark // MatSeqAIJKokkosGetDeviceMat gets the device if it is here, otherwise it creates a place for it and returns NULL
204042217e8SBarry Smith PetscErrorCode MatSeqAIJKokkosGetDeviceMat(Mat A, PetscSplitCSRDataStructure *d_mat)
205a587d139SMark {
206042217e8SBarry Smith   Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
207a587d139SMark 
208a587d139SMark   PetscFunctionBegin;
209a587d139SMark   if (aijkok && aijkok->device_mat_d.data()) {
210a587d139SMark     *d_mat = aijkok->device_mat_d.data();
211a587d139SMark   } else {
2129566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosSyncDevice(A)); // create aijkok (we are making d_mat now so make a place for it)
213a587d139SMark     *d_mat  = NULL;
214a587d139SMark   }
215a587d139SMark   PetscFunctionReturn(0);
216a587d139SMark }
217076ba34aSJunchao Zhang 
218076ba34aSJunchao Zhang /* Generate the transpose on device and cache it internally */
219076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJKokkosGenerateTranspose_Private(Mat A, KokkosCsrMatrix **csrmatT)
220152b3e56SJunchao Zhang {
221152b3e56SJunchao Zhang   Mat_SeqAIJKokkos                 *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
222152b3e56SJunchao Zhang 
223152b3e56SJunchao Zhang   PetscFunctionBegin;
2245f80ce2aSJacob Faibussowitsch   PetscCheck(aijkok,PETSC_COMM_WORLD,PETSC_ERR_PLIB,"Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr");
225076ba34aSJunchao Zhang   if (!aijkok->csrmatT.nnz() || !aijkok->transpose_updated) { /* Generate At for the first time OR just update its values */
226076ba34aSJunchao Zhang     /* FIXME: KK does not separate symbolic/numeric transpose. We could have a permutation array to help value-only update */
2279566063dSJacob Faibussowitsch     PetscCallCXX(aijkok->a_dual.sync_device());
2289566063dSJacob Faibussowitsch     PetscCallCXX(aijkok->csrmatT = KokkosKernels::Impl::transpose_matrix(aijkok->csrmat));
2299566063dSJacob Faibussowitsch     PetscCallCXX(KokkosKernels::sort_crs_matrix(aijkok->csrmatT));
23086a27549SJunchao Zhang     aijkok->transpose_updated = PETSC_TRUE;
231076ba34aSJunchao Zhang   }
232076ba34aSJunchao Zhang   *csrmatT = &aijkok->csrmatT;
233152b3e56SJunchao Zhang   PetscFunctionReturn(0);
234152b3e56SJunchao Zhang }
235152b3e56SJunchao Zhang 
236076ba34aSJunchao Zhang /* Generate the Hermitian on device and cache it internally */
237076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJKokkosGenerateHermitian_Private(Mat A, KokkosCsrMatrix **csrmatH)
238152b3e56SJunchao Zhang {
239152b3e56SJunchao Zhang   Mat_SeqAIJKokkos                 *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
240152b3e56SJunchao Zhang 
241152b3e56SJunchao Zhang   PetscFunctionBegin;
2429566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
2435f80ce2aSJacob Faibussowitsch   PetscCheck(aijkok,PETSC_COMM_WORLD,PETSC_ERR_PLIB,"Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr");
244076ba34aSJunchao Zhang   if (!aijkok->csrmatH.nnz() || !aijkok->hermitian_updated) { /* Generate Ah for the first time OR just update its values */
2459566063dSJacob Faibussowitsch     PetscCallCXX(aijkok->a_dual.sync_device());
2469566063dSJacob Faibussowitsch     PetscCallCXX(aijkok->csrmatH = KokkosKernels::Impl::transpose_matrix(aijkok->csrmat));
2479566063dSJacob Faibussowitsch     PetscCallCXX(KokkosKernels::sort_crs_matrix(aijkok->csrmatH));
248076ba34aSJunchao Zhang    #if defined(PETSC_USE_COMPLEX)
249076ba34aSJunchao Zhang     const auto& a = aijkok->csrmatH.values;
250076ba34aSJunchao Zhang     Kokkos::parallel_for(a.extent(0),KOKKOS_LAMBDA(MatRowMapType i) {a(i) = PetscConj(a(i));});
251076ba34aSJunchao Zhang    #endif
25286a27549SJunchao Zhang     aijkok->hermitian_updated = PETSC_TRUE;
253076ba34aSJunchao Zhang   }
254076ba34aSJunchao Zhang   *csrmatH = &aijkok->csrmatH;
2559566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
256152b3e56SJunchao Zhang   PetscFunctionReturn(0);
257152b3e56SJunchao Zhang }
258a587d139SMark 
2598c3ff71bSJunchao Zhang /* y = A x */
2608c3ff71bSJunchao Zhang static PetscErrorCode MatMult_SeqAIJKokkos(Mat A,Vec xx,Vec yy)
2618c3ff71bSJunchao Zhang {
2628c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos                 *aijkok;
263152b3e56SJunchao Zhang   ConstPetscScalarKokkosView       xv;
264152b3e56SJunchao Zhang   PetscScalarKokkosView            yv;
2658c3ff71bSJunchao Zhang 
2668c3ff71bSJunchao Zhang   PetscFunctionBegin;
2679566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
2689566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
2699566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(xx,&xv));
2709566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosViewWrite(yy,&yv));
2718c3ff71bSJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
272152b3e56SJunchao Zhang   KokkosSparse::spmv("N",1.0/*alpha*/,aijkok->csrmat,xv,0.0/*beta*/,yv); /* y = alpha A x + beta y */
2739566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(xx,&xv));
2749566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosViewWrite(yy,&yv));
275076ba34aSJunchao Zhang   /* 2.0*nnz - numRows seems more accurate here but assumes there are no zero-rows. So a little sloppy here. */
2769566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuFlops(2.0*aijkok->csrmat.nnz()));
2779566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
2788c3ff71bSJunchao Zhang   PetscFunctionReturn(0);
2798c3ff71bSJunchao Zhang }
2808c3ff71bSJunchao Zhang 
2818c3ff71bSJunchao Zhang /* y = A^T x */
2828c3ff71bSJunchao Zhang static PetscErrorCode MatMultTranspose_SeqAIJKokkos(Mat A,Vec xx,Vec yy)
2838c3ff71bSJunchao Zhang {
2848c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos                 *aijkok;
285152b3e56SJunchao Zhang   const char                       *mode;
286152b3e56SJunchao Zhang   ConstPetscScalarKokkosView       xv;
287152b3e56SJunchao Zhang   PetscScalarKokkosView            yv;
288076ba34aSJunchao Zhang   KokkosCsrMatrix                  *csrmat;
2898c3ff71bSJunchao Zhang 
2908c3ff71bSJunchao Zhang   PetscFunctionBegin;
2919566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
2929566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
2939566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(xx,&xv));
2949566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosViewWrite(yy,&yv));
295152b3e56SJunchao Zhang   if (A->form_explicit_transpose) {
2969566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A,&csrmat));
297152b3e56SJunchao Zhang     mode = "N";
298152b3e56SJunchao Zhang   } else {
299076ba34aSJunchao Zhang     aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
300076ba34aSJunchao Zhang     csrmat = &aijkok->csrmat;
301152b3e56SJunchao Zhang     mode = "T";
302152b3e56SJunchao Zhang   }
303076ba34aSJunchao Zhang   KokkosSparse::spmv(mode,1.0/*alpha*/,*csrmat,xv,0.0/*beta*/,yv); /* y = alpha A^T x + beta y */
3049566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(xx,&xv));
3059566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosViewWrite(yy,&yv));
3069566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuFlops(2.0*csrmat->nnz()));
3079566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
3088c3ff71bSJunchao Zhang   PetscFunctionReturn(0);
3098c3ff71bSJunchao Zhang }
3108c3ff71bSJunchao Zhang 
3118c3ff71bSJunchao Zhang /* y = A^H x */
3128c3ff71bSJunchao Zhang static PetscErrorCode MatMultHermitianTranspose_SeqAIJKokkos(Mat A,Vec xx,Vec yy)
3138c3ff71bSJunchao Zhang {
3148c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos                 *aijkok;
315152b3e56SJunchao Zhang   const char                       *mode;
316152b3e56SJunchao Zhang   ConstPetscScalarKokkosView       xv;
317152b3e56SJunchao Zhang   PetscScalarKokkosView            yv;
318076ba34aSJunchao Zhang   KokkosCsrMatrix                  *csrmat;
3198c3ff71bSJunchao Zhang 
3208c3ff71bSJunchao Zhang   PetscFunctionBegin;
3219566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
3229566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
3239566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(xx,&xv));
3249566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosViewWrite(yy,&yv));
325152b3e56SJunchao Zhang   if (A->form_explicit_transpose) {
3269566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateHermitian_Private(A,&csrmat));
327152b3e56SJunchao Zhang     mode = "N";
328152b3e56SJunchao Zhang   } else {
329076ba34aSJunchao Zhang     aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
330076ba34aSJunchao Zhang     csrmat = &aijkok->csrmat;
331152b3e56SJunchao Zhang     mode = "C";
332152b3e56SJunchao Zhang   }
333076ba34aSJunchao Zhang   KokkosSparse::spmv(mode,1.0/*alpha*/,*csrmat,xv,0.0/*beta*/,yv); /* y = alpha A^H x + beta y */
3349566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(xx,&xv));
3359566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosViewWrite(yy,&yv));
3369566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuFlops(2.0*csrmat->nnz()));
3379566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
3388c3ff71bSJunchao Zhang   PetscFunctionReturn(0);
3398c3ff71bSJunchao Zhang }
3408c3ff71bSJunchao Zhang 
3418c3ff71bSJunchao Zhang /* z = A x + y */
3428c3ff71bSJunchao Zhang static PetscErrorCode MatMultAdd_SeqAIJKokkos(Mat A,Vec xx,Vec yy, Vec zz)
3438c3ff71bSJunchao Zhang {
3448c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos                 *aijkok;
345152b3e56SJunchao Zhang   ConstPetscScalarKokkosView       xv,yv;
346152b3e56SJunchao Zhang   PetscScalarKokkosView            zv;
3478c3ff71bSJunchao Zhang 
3488c3ff71bSJunchao Zhang   PetscFunctionBegin;
3499566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
3509566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
3519566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(xx,&xv));
3529566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(yy,&yv));
3539566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosViewWrite(zz,&zv));
3548c3ff71bSJunchao Zhang   if (zz != yy) Kokkos::deep_copy(zv,yv);
3558c3ff71bSJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
356152b3e56SJunchao Zhang   KokkosSparse::spmv("N",1.0/*alpha*/,aijkok->csrmat,xv,1.0/*beta*/,zv); /* z = alpha A x + beta z */
3579566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(xx,&xv));
3589566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(yy,&yv));
3599566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosViewWrite(zz,&zv));
3609566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuFlops(2.0*aijkok->csrmat.nnz()));
3619566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
3628c3ff71bSJunchao Zhang   PetscFunctionReturn(0);
3638c3ff71bSJunchao Zhang }
3648c3ff71bSJunchao Zhang 
3658c3ff71bSJunchao Zhang /* z = A^T x + y */
3668c3ff71bSJunchao Zhang static PetscErrorCode MatMultTransposeAdd_SeqAIJKokkos(Mat A,Vec xx,Vec yy,Vec zz)
3678c3ff71bSJunchao Zhang {
3688c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos                 *aijkok;
369152b3e56SJunchao Zhang   const char                       *mode;
370152b3e56SJunchao Zhang   ConstPetscScalarKokkosView       xv,yv;
371152b3e56SJunchao Zhang   PetscScalarKokkosView            zv;
372076ba34aSJunchao Zhang   KokkosCsrMatrix                  *csrmat;
3738c3ff71bSJunchao Zhang 
3748c3ff71bSJunchao Zhang   PetscFunctionBegin;
3759566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
3769566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
3779566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(xx,&xv));
3789566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(yy,&yv));
3799566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosViewWrite(zz,&zv));
3808c3ff71bSJunchao Zhang   if (zz != yy) Kokkos::deep_copy(zv,yv);
381152b3e56SJunchao Zhang   if (A->form_explicit_transpose) {
3829566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A,&csrmat));
383152b3e56SJunchao Zhang     mode = "N";
384152b3e56SJunchao Zhang   } else {
385076ba34aSJunchao Zhang     aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
386076ba34aSJunchao Zhang     csrmat = &aijkok->csrmat;
387152b3e56SJunchao Zhang     mode = "T";
388152b3e56SJunchao Zhang   }
389076ba34aSJunchao Zhang   KokkosSparse::spmv(mode,1.0/*alpha*/,*csrmat,xv,1.0/*beta*/,zv); /* z = alpha A^T x + beta z */
3909566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(xx,&xv));
3919566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(yy,&yv));
3929566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosViewWrite(zz,&zv));
3939566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuFlops(2.0*csrmat->nnz()));
3949566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
3958c3ff71bSJunchao Zhang   PetscFunctionReturn(0);
3968c3ff71bSJunchao Zhang }
3978c3ff71bSJunchao Zhang 
3988c3ff71bSJunchao Zhang /* z = A^H x + y */
3998c3ff71bSJunchao Zhang static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJKokkos(Mat A,Vec xx,Vec yy,Vec zz)
4008c3ff71bSJunchao Zhang {
4018c3ff71bSJunchao Zhang   Mat_SeqAIJKokkos                 *aijkok;
402152b3e56SJunchao Zhang   const char                       *mode;
403152b3e56SJunchao Zhang   ConstPetscScalarKokkosView       xv,yv;
404152b3e56SJunchao Zhang   PetscScalarKokkosView            zv;
405076ba34aSJunchao Zhang   KokkosCsrMatrix                  *csrmat;
4068c3ff71bSJunchao Zhang 
4078c3ff71bSJunchao Zhang   PetscFunctionBegin;
4089566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
4099566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
4109566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(xx,&xv));
4119566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(yy,&yv));
4129566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosViewWrite(zz,&zv));
4138c3ff71bSJunchao Zhang   if (zz != yy) Kokkos::deep_copy(zv,yv);
414152b3e56SJunchao Zhang   if (A->form_explicit_transpose) {
4159566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateHermitian_Private(A,&csrmat));
416152b3e56SJunchao Zhang     mode = "N";
417152b3e56SJunchao Zhang   } else {
418076ba34aSJunchao Zhang     aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
419076ba34aSJunchao Zhang     csrmat = &aijkok->csrmat;
420152b3e56SJunchao Zhang     mode = "C";
421152b3e56SJunchao Zhang   }
422076ba34aSJunchao Zhang   KokkosSparse::spmv(mode,1.0/*alpha*/,*csrmat,xv,1.0/*beta*/,zv); /* z = alpha A^H x + beta z */
4239566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(xx,&xv));
4249566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(yy,&yv));
4259566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosViewWrite(zz,&zv));
4269566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuFlops(2.0*csrmat->nnz()));
4279566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
428152b3e56SJunchao Zhang   PetscFunctionReturn(0);
429152b3e56SJunchao Zhang }
430152b3e56SJunchao Zhang 
431152b3e56SJunchao Zhang PetscErrorCode MatSetOption_SeqAIJKokkos(Mat A,MatOption op,PetscBool flg)
432152b3e56SJunchao Zhang {
433152b3e56SJunchao Zhang   Mat_SeqAIJKokkos          *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
434152b3e56SJunchao Zhang 
435152b3e56SJunchao Zhang   PetscFunctionBegin;
436152b3e56SJunchao Zhang   switch (op) {
437152b3e56SJunchao Zhang     case MAT_FORM_EXPLICIT_TRANSPOSE:
438152b3e56SJunchao Zhang       /* need to destroy the transpose matrix if present to prevent from logic errors if flg is set to true later */
4399566063dSJacob Faibussowitsch       if (A->form_explicit_transpose && !flg && aijkok) PetscCall(aijkok->DestroyMatTranspose());
440152b3e56SJunchao Zhang       A->form_explicit_transpose = flg;
441152b3e56SJunchao Zhang       break;
442152b3e56SJunchao Zhang     default:
4439566063dSJacob Faibussowitsch       PetscCall(MatSetOption_SeqAIJ(A,op,flg));
444152b3e56SJunchao Zhang       break;
445152b3e56SJunchao Zhang   }
4468c3ff71bSJunchao Zhang   PetscFunctionReturn(0);
4478c3ff71bSJunchao Zhang }
4488c3ff71bSJunchao Zhang 
449076ba34aSJunchao Zhang /* Depending on reuse, either build a new mat, or use the existing mat */
4503d0639e7SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJKokkos(Mat A, MatType mtype, MatReuse reuse, Mat* newmat)
4518c3ff71bSJunchao Zhang {
452076ba34aSJunchao Zhang   Mat_SeqAIJ       *aseq;
4538c3ff71bSJunchao Zhang 
4548c3ff71bSJunchao Zhang   PetscFunctionBegin;
4559566063dSJacob Faibussowitsch   PetscCall(PetscKokkosInitializeCheck());
456076ba34aSJunchao Zhang   if (reuse == MAT_INITIAL_MATRIX) { /* Build a brand new mat */
4579566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(A,MAT_COPY_VALUES,newmat)); /* the returned newmat is a SeqAIJKokkos */
4588c3ff71bSJunchao Zhang   } else if (reuse == MAT_REUSE_MATRIX) { /* Reuse the mat created before */
4599566063dSJacob Faibussowitsch     PetscCall(MatCopy(A,*newmat,SAME_NONZERO_PATTERN)); /* newmat is already a SeqAIJKokkos */
460076ba34aSJunchao Zhang   } else if (reuse == MAT_INPLACE_MATRIX) { /* newmat is A */
4615f80ce2aSJacob Faibussowitsch     PetscCheck(A == *newmat,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"A != *newmat with MAT_INPLACE_MATRIX");
4629566063dSJacob Faibussowitsch     PetscCall(PetscFree(A->defaultvectype));
4639566063dSJacob Faibussowitsch     PetscCall(PetscStrallocpy(VECKOKKOS,&A->defaultvectype)); /* Allocate and copy the string */
4649566063dSJacob Faibussowitsch     PetscCall(PetscObjectChangeTypeName((PetscObject)A,MATSEQAIJKOKKOS));
4659566063dSJacob Faibussowitsch     PetscCall(MatSetOps_SeqAIJKokkos(A));
466076ba34aSJunchao Zhang     aseq = static_cast<Mat_SeqAIJ*>(A->data);
467394ed5ebSJunchao Zhang     if (A->assembled) { /* Copy i, j (but not values) to device for an assembled matrix if not yet */
4685f80ce2aSJacob Faibussowitsch       PetscCheck(!A->spptr,PETSC_COMM_WORLD,PETSC_ERR_PLIB,"Expect NULL (Mat_SeqAIJKokkos*)A->spptr");
469076ba34aSJunchao Zhang       A->spptr = new Mat_SeqAIJKokkos(A->rmap->n,A->cmap->n,aseq->nz,aseq->i,aseq->j,aseq->a,A->nonzerostate,PETSC_FALSE);
4708c3ff71bSJunchao Zhang     }
471076ba34aSJunchao Zhang   }
4728c3ff71bSJunchao Zhang   PetscFunctionReturn(0);
4738c3ff71bSJunchao Zhang }
4748c3ff71bSJunchao Zhang 
475076ba34aSJunchao Zhang /* MatDuplicate always creates a new matrix. MatDuplicate can be called either on an assembled matrix or
476076ba34aSJunchao Zhang    an unassembled matrix, even though MAT_COPY_VALUES is not allowed for unassembled matrix.
477076ba34aSJunchao Zhang  */
478076ba34aSJunchao Zhang static PetscErrorCode MatDuplicate_SeqAIJKokkos(Mat A,MatDuplicateOption dupOption,Mat *B)
4798c3ff71bSJunchao Zhang {
480076ba34aSJunchao Zhang   Mat_SeqAIJ            *bseq;
481076ba34aSJunchao Zhang   Mat_SeqAIJKokkos      *akok = static_cast<Mat_SeqAIJKokkos*>(A->spptr),*bkok;
482076ba34aSJunchao Zhang   Mat                   mat;
4838c3ff71bSJunchao Zhang 
4848c3ff71bSJunchao Zhang   PetscFunctionBegin;
485076ba34aSJunchao Zhang   /* Do not copy values on host as A's latest values might be on device. We don't want to do sync blindly */
4869566063dSJacob Faibussowitsch   PetscCall(MatDuplicate_SeqAIJ(A,MAT_DO_NOT_COPY_VALUES,B));
487076ba34aSJunchao Zhang   mat  = *B;
488076ba34aSJunchao Zhang   if (A->assembled) {
489076ba34aSJunchao Zhang     bseq = static_cast<Mat_SeqAIJ*>(mat->data);
490076ba34aSJunchao Zhang     bkok = new Mat_SeqAIJKokkos(mat->rmap->n,mat->cmap->n,bseq->nz,bseq->i,bseq->j,bseq->a,mat->nonzerostate,PETSC_FALSE);
491076ba34aSJunchao Zhang     bkok->a_dual.clear_sync_state(); /* Clear B's sync state as it will be decided below */
492076ba34aSJunchao Zhang     /* Now copy values to B if needed */
493076ba34aSJunchao Zhang     if (dupOption == MAT_COPY_VALUES) {
494076ba34aSJunchao Zhang       if (akok->a_dual.need_sync_device()) {
495076ba34aSJunchao Zhang         Kokkos::deep_copy(bkok->a_dual.view_host(),akok->a_dual.view_host());
496076ba34aSJunchao Zhang         bkok->a_dual.modify_host();
497076ba34aSJunchao Zhang       } else { /* If device has the latest data, we only copy data on device */
498076ba34aSJunchao Zhang         Kokkos::deep_copy(bkok->a_dual.view_device(),akok->a_dual.view_device());
499076ba34aSJunchao Zhang         bkok->a_dual.modify_device();
500076ba34aSJunchao Zhang       }
501076ba34aSJunchao Zhang     } else { /* MAT_DO_NOT_COPY_VALUES or MAT_SHARE_NONZERO_PATTERN. B's values should be zeroed */
502076ba34aSJunchao Zhang       /* B's values on host should be already zeroed by MatDuplicate_SeqAIJ() */
503076ba34aSJunchao Zhang       bkok->a_dual.modify_host();
504076ba34aSJunchao Zhang     }
505076ba34aSJunchao Zhang     mat->spptr = bkok;
506076ba34aSJunchao Zhang   }
507076ba34aSJunchao Zhang 
5089566063dSJacob Faibussowitsch   PetscCall(PetscFree(mat->defaultvectype));
5099566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(VECKOKKOS,&mat->defaultvectype)); /* Allocate and copy the string */
5109566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)mat,MATSEQAIJKOKKOS));
5119566063dSJacob Faibussowitsch   PetscCall(MatSetOps_SeqAIJKokkos(mat));
5128c3ff71bSJunchao Zhang   PetscFunctionReturn(0);
5138c3ff71bSJunchao Zhang }
5148c3ff71bSJunchao Zhang 
5150ecb592aSJunchao Zhang static PetscErrorCode MatTranspose_SeqAIJKokkos(Mat A,MatReuse reuse,Mat *B)
5160ecb592aSJunchao Zhang {
5170ecb592aSJunchao Zhang   Mat               At;
518ff751488SJunchao Zhang   KokkosCsrMatrix   *internT;
5190ecb592aSJunchao Zhang   Mat_SeqAIJKokkos  *atkok,*bkok;
5200ecb592aSJunchao Zhang 
5210ecb592aSJunchao Zhang   PetscFunctionBegin;
5229566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A,&internT)); /* Generate a transpose internally */
5230ecb592aSJunchao Zhang   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) {
524ff751488SJunchao Zhang     /* Deep copy internT, as we want to isolate the internal transpose */
5259566063dSJacob Faibussowitsch     PetscCallCXX(atkok = new Mat_SeqAIJKokkos(KokkosCsrMatrix("csrmat",*internT)));
5269566063dSJacob Faibussowitsch     PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PetscObjectComm((PetscObject)A),atkok,&At));
5270ecb592aSJunchao Zhang     if (reuse == MAT_INITIAL_MATRIX) *B = At;
5289566063dSJacob Faibussowitsch     else PetscCall(MatHeaderReplace(A,&At)); /* Replace A with At inplace */
5290ecb592aSJunchao Zhang   } else { /* MAT_REUSE_MATRIX, just need to copy values to B on device */
5300ecb592aSJunchao Zhang     if ((*B)->assembled) {
5310ecb592aSJunchao Zhang       bkok = static_cast<Mat_SeqAIJKokkos*>((*B)->spptr);
5329566063dSJacob Faibussowitsch       PetscCallCXX(Kokkos::deep_copy(bkok->a_dual.view_device(),internT->values));
5339566063dSJacob Faibussowitsch       PetscCall(MatSeqAIJKokkosModifyDevice(*B));
5340ecb592aSJunchao Zhang     } else if ((*B)->preallocated) { /* It is ok for B to be only preallocated, as needed in MatTranspose_MPIAIJ */
5350ecb592aSJunchao Zhang       Mat_SeqAIJ              *bseq = static_cast<Mat_SeqAIJ*>((*B)->data);
5360ecb592aSJunchao Zhang       MatScalarKokkosViewHost a_h(bseq->a,internT->nnz()); /* bseq->nz = 0 if unassembled */
5370ecb592aSJunchao Zhang       MatColIdxKokkosViewHost j_h(bseq->j,internT->nnz());
5389566063dSJacob Faibussowitsch       PetscCallCXX(Kokkos::deep_copy(a_h,internT->values));
5399566063dSJacob Faibussowitsch       PetscCallCXX(Kokkos::deep_copy(j_h,internT->graph.entries));
5400ecb592aSJunchao Zhang     } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONGSTATE,"B must be assembled or preallocated");
5410ecb592aSJunchao Zhang   }
5420ecb592aSJunchao Zhang   PetscFunctionReturn(0);
5430ecb592aSJunchao Zhang }
5440ecb592aSJunchao Zhang 
5458c3ff71bSJunchao Zhang static PetscErrorCode MatDestroy_SeqAIJKokkos(Mat A)
5468c3ff71bSJunchao Zhang {
54786a27549SJunchao Zhang   Mat_SeqAIJKokkos           *aijkok;
5488c3ff71bSJunchao Zhang 
5498c3ff71bSJunchao Zhang   PetscFunctionBegin;
55086a27549SJunchao Zhang   if (A->factortype == MAT_FACTOR_NONE) {
55186a27549SJunchao Zhang     aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
5528c3ff71bSJunchao Zhang     delete aijkok;
55386a27549SJunchao Zhang   } else {
55486a27549SJunchao Zhang     delete static_cast<Mat_SeqAIJKokkosTriFactors*>(A->spptr);
55586a27549SJunchao Zhang   }
556cbc6b225SStefano Zampini   A->spptr = NULL;
5579566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL));
5589566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL));
5599566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL));
5609566063dSJacob Faibussowitsch   PetscCall(MatDestroy_SeqAIJ(A));
5618c3ff71bSJunchao Zhang   PetscFunctionReturn(0);
5628c3ff71bSJunchao Zhang }
5638c3ff71bSJunchao Zhang 
5643f3ba80aSJunchao Zhang /*MC
5653f3ba80aSJunchao Zhang    MATSEQAIJKOKKOS - MATAIJKOKKOS = "(seq)aijkokkos" - A matrix type to be used for sparse matrices with Kokkos
5663f3ba80aSJunchao Zhang 
5673f3ba80aSJunchao Zhang    A matrix type type using Kokkos-Kernels CrsMatrix type for portability across different device types
5683f3ba80aSJunchao Zhang 
5693f3ba80aSJunchao Zhang    Options Database Keys:
5703f3ba80aSJunchao Zhang .  -mat_type aijkokkos - sets the matrix type to "aijkokkos" during a call to MatSetFromOptions()
5713f3ba80aSJunchao Zhang 
5723f3ba80aSJunchao Zhang   Level: beginner
5733f3ba80aSJunchao Zhang 
574db781477SPatrick Sanan .seealso: `MatCreateSeqAIJKokkos()`, `MATMPIAIJKOKKOS`
5753f3ba80aSJunchao Zhang M*/
57686a27549SJunchao Zhang PETSC_EXTERN PetscErrorCode MatCreate_SeqAIJKokkos(Mat A)
57786a27549SJunchao Zhang {
57886a27549SJunchao Zhang   PetscFunctionBegin;
5799566063dSJacob Faibussowitsch   PetscCall(PetscKokkosInitializeCheck());
5809566063dSJacob Faibussowitsch   PetscCall(MatCreate_SeqAIJ(A));
5819566063dSJacob Faibussowitsch   PetscCall(MatConvert_SeqAIJ_SeqAIJKokkos(A,MATSEQAIJKOKKOS,MAT_INPLACE_MATRIX,&A));
58286a27549SJunchao Zhang   PetscFunctionReturn(0);
58386a27549SJunchao Zhang }
58486a27549SJunchao Zhang 
585076ba34aSJunchao Zhang /* Merge A, B into a matrix C. A is put before B. C's size would be A->rmap->n by (A->cmap->n + B->cmap->n) */
586076ba34aSJunchao Zhang PetscErrorCode MatSeqAIJKokkosMergeMats(Mat A,Mat B,MatReuse reuse,Mat* C)
587a3f881fbSStefano Zampini {
588076ba34aSJunchao Zhang   Mat_SeqAIJ                   *a,*b;
589076ba34aSJunchao Zhang   Mat_SeqAIJKokkos             *akok,*bkok,*ckok;
590076ba34aSJunchao Zhang   MatScalarKokkosView          aa,ba,ca;
591076ba34aSJunchao Zhang   MatRowMapKokkosView          ai,bi,ci;
592076ba34aSJunchao Zhang   MatColIdxKokkosView          aj,bj,cj;
593076ba34aSJunchao Zhang   PetscInt                     m,n,nnz,aN;
594a3f881fbSStefano Zampini 
595a3f881fbSStefano Zampini   PetscFunctionBegin;
596076ba34aSJunchao Zhang   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
597076ba34aSJunchao Zhang   PetscValidHeaderSpecific(B,MAT_CLASSID,2);
598076ba34aSJunchao Zhang   PetscValidPointer(C,4);
599076ba34aSJunchao Zhang   PetscCheckTypeName(A,MATSEQAIJKOKKOS);
600076ba34aSJunchao Zhang   PetscCheckTypeName(B,MATSEQAIJKOKKOS);
6015f80ce2aSJacob Faibussowitsch   PetscCheck(A->rmap->n == B->rmap->n,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %" PetscInt_FMT " != %" PetscInt_FMT,A->rmap->n,B->rmap->n);
6025f80ce2aSJacob Faibussowitsch   PetscCheck(reuse != MAT_INPLACE_MATRIX,PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_INPLACE_MATRIX not supported");
603076ba34aSJunchao Zhang 
6049566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
6059566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(B));
606076ba34aSJunchao Zhang   a    = static_cast<Mat_SeqAIJ*>(A->data);
607076ba34aSJunchao Zhang   b    = static_cast<Mat_SeqAIJ*>(B->data);
608076ba34aSJunchao Zhang   akok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
609076ba34aSJunchao Zhang   bkok = static_cast<Mat_SeqAIJKokkos*>(B->spptr);
610076ba34aSJunchao Zhang   aa   = akok->a_dual.view_device();
611076ba34aSJunchao Zhang   ai   = akok->i_dual.view_device();
612076ba34aSJunchao Zhang   ba   = bkok->a_dual.view_device();
613076ba34aSJunchao Zhang   bi   = bkok->i_dual.view_device();
614076ba34aSJunchao Zhang   m    = A->rmap->n; /* M, N and nnz of C */
615076ba34aSJunchao Zhang   n    = A->cmap->n + B->cmap->n;
616076ba34aSJunchao Zhang   nnz  = a->nz + b->nz;
617076ba34aSJunchao Zhang   aN   = A->cmap->n; /* N of A */
618076ba34aSJunchao Zhang   if (reuse == MAT_INITIAL_MATRIX) {
619076ba34aSJunchao Zhang     aj = akok->j_dual.view_device();
620076ba34aSJunchao Zhang     bj = bkok->j_dual.view_device();
621076ba34aSJunchao Zhang     auto ca_dual = MatScalarKokkosDualView("a",aa.extent(0)+ba.extent(0));
622076ba34aSJunchao Zhang     auto ci_dual = MatRowMapKokkosDualView("i",ai.extent(0));
623076ba34aSJunchao Zhang     auto cj_dual = MatColIdxKokkosDualView("j",aj.extent(0)+bj.extent(0));
624076ba34aSJunchao Zhang     ca = ca_dual.view_device();
625076ba34aSJunchao Zhang     ci = ci_dual.view_device();
626076ba34aSJunchao Zhang     cj = cj_dual.view_device();
627076ba34aSJunchao Zhang 
628076ba34aSJunchao Zhang     /* Concatenate A and B in parallel using Kokkos hierarchical parallelism */
629076ba34aSJunchao Zhang     Kokkos::parallel_for(Kokkos::TeamPolicy<>(m, Kokkos::AUTO()),KOKKOS_LAMBDA(const KokkosTeamMemberType& t) {
630076ba34aSJunchao Zhang       PetscInt i = t.league_rank(); /* row i */
631076ba34aSJunchao Zhang       PetscInt coffset = ai(i) + bi(i), alen = ai(i+1)-ai(i), blen = bi(i+1)-bi(i);
632076ba34aSJunchao Zhang 
633076ba34aSJunchao Zhang       Kokkos::single(Kokkos::PerTeam(t), [=]() { /* this side effect only happens once per whole team */
634076ba34aSJunchao Zhang         ci(i) = coffset;
635076ba34aSJunchao Zhang         if (i == m-1) ci(m) = ai(m) + bi(m);
636076ba34aSJunchao Zhang       });
637076ba34aSJunchao Zhang 
638076ba34aSJunchao Zhang       Kokkos::parallel_for(Kokkos::TeamThreadRange(t, alen+blen), [&](PetscInt k) {
639076ba34aSJunchao Zhang         if (k < alen) {
640076ba34aSJunchao Zhang           ca(coffset+k) = aa(ai(i)+k);
641076ba34aSJunchao Zhang           cj(coffset+k) = aj(ai(i)+k);
642076ba34aSJunchao Zhang         } else {
643076ba34aSJunchao Zhang           ca(coffset+k) = ba(bi(i)+k-alen);
644076ba34aSJunchao Zhang           cj(coffset+k) = bj(bi(i)+k-alen) + aN; /* Entries in B get new column indices in C */
645076ba34aSJunchao Zhang         }
646076ba34aSJunchao Zhang       });
647076ba34aSJunchao Zhang     });
648076ba34aSJunchao Zhang     ca_dual.modify_device();
649076ba34aSJunchao Zhang     ci_dual.modify_device();
650076ba34aSJunchao Zhang     cj_dual.modify_device();
6519566063dSJacob Faibussowitsch     PetscCallCXX(ckok = new Mat_SeqAIJKokkos(m,n,nnz,ci_dual,cj_dual,ca_dual));
6529566063dSJacob Faibussowitsch     PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF,ckok,C));
653076ba34aSJunchao Zhang   } else if (reuse == MAT_REUSE_MATRIX) {
654076ba34aSJunchao Zhang     PetscValidHeaderSpecific(*C,MAT_CLASSID,4);
655076ba34aSJunchao Zhang     PetscCheckTypeName(*C,MATSEQAIJKOKKOS);
656076ba34aSJunchao Zhang     ckok = static_cast<Mat_SeqAIJKokkos*>((*C)->spptr);
657076ba34aSJunchao Zhang     ca   = ckok->a_dual.view_device();
658076ba34aSJunchao Zhang     ci   = ckok->i_dual.view_device();
659076ba34aSJunchao Zhang 
660076ba34aSJunchao Zhang     Kokkos::parallel_for(Kokkos::TeamPolicy<>(m, Kokkos::AUTO()),KOKKOS_LAMBDA(const KokkosTeamMemberType& t) {
661076ba34aSJunchao Zhang       PetscInt i = t.league_rank(); /* row i */
662076ba34aSJunchao Zhang       PetscInt alen = ai(i+1)-ai(i), blen = bi(i+1)-bi(i);
663076ba34aSJunchao Zhang       Kokkos::parallel_for(Kokkos::TeamThreadRange(t, alen+blen), [&](PetscInt k) {
664076ba34aSJunchao Zhang         if (k < alen) ca(ci(i)+k) = aa(ai(i)+k);
665076ba34aSJunchao Zhang         else          ca(ci(i)+k) = ba(bi(i)+k-alen);
666076ba34aSJunchao Zhang       });
667076ba34aSJunchao Zhang     });
6689566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosModifyDevice(*C));
669076ba34aSJunchao Zhang   }
670076ba34aSJunchao Zhang   PetscFunctionReturn(0);
671076ba34aSJunchao Zhang }
672076ba34aSJunchao Zhang 
673076ba34aSJunchao Zhang static PetscErrorCode MatProductDataDestroy_SeqAIJKokkos(void* pdata)
674076ba34aSJunchao Zhang {
675076ba34aSJunchao Zhang   PetscFunctionBegin;
676076ba34aSJunchao Zhang   delete static_cast<MatProductData_SeqAIJKokkos*>(pdata);
677a3f881fbSStefano Zampini   PetscFunctionReturn(0);
678a3f881fbSStefano Zampini }
679a3f881fbSStefano Zampini 
680a3f881fbSStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJKokkos_SeqAIJKokkos(Mat C)
681a3f881fbSStefano Zampini {
682a3f881fbSStefano Zampini   Mat_Product                    *product = C->product;
683a3f881fbSStefano Zampini   Mat                            A,B;
684076ba34aSJunchao Zhang   bool                           transA,transB; /* use bool, since KK needs this type */
685a3f881fbSStefano Zampini   Mat_SeqAIJKokkos               *akok,*bkok,*ckok;
686a3f881fbSStefano Zampini   Mat_SeqAIJ                     *c;
687076ba34aSJunchao Zhang   MatProductData_SeqAIJKokkos    *pdata;
688076ba34aSJunchao Zhang   KokkosCsrMatrix                *csrmatA,*csrmatB;
689a3f881fbSStefano Zampini 
690a3f881fbSStefano Zampini   PetscFunctionBegin;
691a3f881fbSStefano Zampini   MatCheckProduct(C,1);
6925f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
693076ba34aSJunchao Zhang   pdata = static_cast<MatProductData_SeqAIJKokkos*>(C->product->data);
694076ba34aSJunchao Zhang 
695076ba34aSJunchao Zhang   if (pdata->reusesym) { /* We reached here through e.g., MatMatMult(A,B,MAT_INITIAL_MATRIX,..,C), where symbolic/numeric are combined */
696076ba34aSJunchao Zhang     pdata->reusesym = PETSC_FALSE; /* So that next time when user calls MatMatMult(E,F,MAT_REUSE_MATRIX,..,C), we still do numeric  */
697076ba34aSJunchao Zhang     PetscFunctionReturn(0);
698076ba34aSJunchao Zhang   }
699076ba34aSJunchao Zhang 
700076ba34aSJunchao Zhang   switch (product->type) {
701076ba34aSJunchao Zhang     case MATPRODUCT_AB:  transA = false; transB = false; break;
702076ba34aSJunchao Zhang     case MATPRODUCT_AtB: transA = true;  transB = false; break;
703076ba34aSJunchao Zhang     case MATPRODUCT_ABt: transA = false; transB = true;  break;
704076ba34aSJunchao Zhang     default:
70598921bdaSJacob Faibussowitsch       SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Unsupported product type %s",MatProductTypes[product->type]);
706076ba34aSJunchao Zhang   }
707076ba34aSJunchao Zhang 
708a3f881fbSStefano Zampini   A     = product->A;
709a3f881fbSStefano Zampini   B     = product->B;
7109566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
7119566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(B));
712a3f881fbSStefano Zampini   akok  = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
713a3f881fbSStefano Zampini   bkok  = static_cast<Mat_SeqAIJKokkos*>(B->spptr);
714a3f881fbSStefano Zampini   ckok  = static_cast<Mat_SeqAIJKokkos*>(C->spptr);
715076ba34aSJunchao Zhang 
7165f80ce2aSJacob Faibussowitsch   PetscCheck(ckok,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Device data structure spptr is empty");
717076ba34aSJunchao Zhang 
718076ba34aSJunchao Zhang   csrmatA = &akok->csrmat;
719076ba34aSJunchao Zhang   csrmatB = &bkok->csrmat;
720076ba34aSJunchao Zhang 
721076ba34aSJunchao Zhang   /* TODO: Once KK spgemm implements transpose, we can get rid of the explicit transpose here */
722076ba34aSJunchao Zhang   if (transA) {
7239566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A,&csrmatA));
724076ba34aSJunchao Zhang     transA = false;
725a3f881fbSStefano Zampini   }
726a3f881fbSStefano Zampini 
727076ba34aSJunchao Zhang   if (transB) {
7289566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(B,&csrmatB));
729076ba34aSJunchao Zhang     transB = false;
730076ba34aSJunchao Zhang   }
7319566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
7329566063dSJacob Faibussowitsch   PetscCallCXX(KokkosSparse::spgemm_numeric(pdata->kh,*csrmatA,transA,*csrmatB,transB,ckok->csrmat));
7339566063dSJacob Faibussowitsch   PetscCallCXX(KokkosKernels::sort_crs_matrix(ckok->csrmat)); /* without the sort, mat_tests-ex62_14_seqaijkokkos failed */
7349566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
7359566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosModifyDevice(C));
736a3f881fbSStefano Zampini   /* shorter version of MatAssemblyEnd_SeqAIJ */
737a3f881fbSStefano Zampini   c = (Mat_SeqAIJ*)C->data;
7389566063dSJacob Faibussowitsch   PetscCall(PetscInfo(C,"Matrix size: %" PetscInt_FMT " X %" PetscInt_FMT "; storage space: 0 unneeded,%" PetscInt_FMT " used\n",C->rmap->n,C->cmap->n,c->nz));
7399566063dSJacob Faibussowitsch   PetscCall(PetscInfo(C,"Number of mallocs during MatSetValues() is 0\n"));
7409566063dSJacob Faibussowitsch   PetscCall(PetscInfo(C,"Maximum nonzeros in any row is %" PetscInt_FMT "\n",c->rmax));
741a3f881fbSStefano Zampini   c->reallocs         = 0;
742076ba34aSJunchao Zhang   C->info.mallocs     = 0;
743a3f881fbSStefano Zampini   C->info.nz_unneeded = 0;
744a3f881fbSStefano Zampini   C->assembled        = C->was_assembled = PETSC_TRUE;
745a3f881fbSStefano Zampini   C->num_ass++;
746a3f881fbSStefano Zampini   PetscFunctionReturn(0);
747a3f881fbSStefano Zampini }
748a3f881fbSStefano Zampini 
749a3f881fbSStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJKokkos_SeqAIJKokkos(Mat C)
750a3f881fbSStefano Zampini {
751076ba34aSJunchao Zhang   Mat_Product                    *product = C->product;
752076ba34aSJunchao Zhang   MatProductType                 ptype;
753076ba34aSJunchao Zhang   Mat                            A,B;
754076ba34aSJunchao Zhang   bool                           transA,transB;
755076ba34aSJunchao Zhang   Mat_SeqAIJKokkos               *akok,*bkok,*ckok;
756076ba34aSJunchao Zhang   MatProductData_SeqAIJKokkos    *pdata;
757076ba34aSJunchao Zhang   MPI_Comm                       comm;
758076ba34aSJunchao Zhang   KokkosCsrMatrix                *csrmatA,*csrmatB,csrmatC;
759a3f881fbSStefano Zampini 
760a3f881fbSStefano Zampini   PetscFunctionBegin;
761a3f881fbSStefano Zampini   MatCheckProduct(C,1);
7629566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)C,&comm));
7635f80ce2aSJacob Faibussowitsch   PetscCheck(!product->data,comm,PETSC_ERR_PLIB,"Product data not empty");
764a3f881fbSStefano Zampini   A       = product->A;
765a3f881fbSStefano Zampini   B       = product->B;
7669566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
7679566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(B));
768a3f881fbSStefano Zampini   akok    = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
769a3f881fbSStefano Zampini   bkok    = static_cast<Mat_SeqAIJKokkos*>(B->spptr);
770076ba34aSJunchao Zhang   csrmatA = &akok->csrmat;
771076ba34aSJunchao Zhang   csrmatB = &bkok->csrmat;
772076ba34aSJunchao Zhang 
773a3f881fbSStefano Zampini   ptype   = product->type;
774a3f881fbSStefano Zampini   switch (ptype) {
775076ba34aSJunchao Zhang     case MATPRODUCT_AB:  transA = false; transB = false; break;
776076ba34aSJunchao Zhang     case MATPRODUCT_AtB: transA = true;  transB = false; break;
777076ba34aSJunchao Zhang     case MATPRODUCT_ABt: transA = false; transB = true;  break;
778a3f881fbSStefano Zampini     default:
77998921bdaSJacob Faibussowitsch       SETERRQ(comm,PETSC_ERR_PLIB,"Unsupported product type %s",MatProductTypes[product->type]);
780a3f881fbSStefano Zampini   }
781a3f881fbSStefano Zampini 
782076ba34aSJunchao Zhang   product->data = pdata = new MatProductData_SeqAIJKokkos();
783076ba34aSJunchao Zhang   pdata->kh.set_team_work_size(16);
784076ba34aSJunchao Zhang   pdata->kh.set_dynamic_scheduling(true);
785076ba34aSJunchao Zhang   pdata->reusesym = product->api_user;
786a3f881fbSStefano Zampini 
787076ba34aSJunchao Zhang   /* TODO: add command line options to select spgemm algorithms */
788076ba34aSJunchao Zhang   auto spgemm_alg = KokkosSparse::SPGEMMAlgorithm::SPGEMM_KK;
7896ffb9508SJunchao Zhang   /* CUDA-10.2's spgemm has bugs. As as of 2022-01-19, KK does not support CUDA-11.x's newer spgemm API.
7906ffb9508SJunchao Zhang      We can default to SPGEMMAlgorithm::SPGEMM_CUSPARSE with CUDA-11+ when KK adds the support.
7916ffb9508SJunchao Zhang    */
792076ba34aSJunchao Zhang   pdata->kh.create_spgemm_handle(spgemm_alg);
793076ba34aSJunchao Zhang 
7949566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
795076ba34aSJunchao Zhang   /* TODO: Get rid of the explicit transpose once KK-spgemm implements the transpose option */
796076ba34aSJunchao Zhang   if (transA) {
7979566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A,&csrmatA));
798076ba34aSJunchao Zhang     transA = false;
799076ba34aSJunchao Zhang   }
800076ba34aSJunchao Zhang 
801076ba34aSJunchao Zhang   if (transB) {
8029566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(B,&csrmatB));
803076ba34aSJunchao Zhang     transB = false;
804076ba34aSJunchao Zhang   }
805076ba34aSJunchao Zhang 
8069566063dSJacob Faibussowitsch   PetscCallCXX(KokkosSparse::spgemm_symbolic(pdata->kh,*csrmatA,transA,*csrmatB,transB,csrmatC));
807076ba34aSJunchao Zhang   /* spgemm_symbolic() only populates C's rowmap, but not C's column indices.
808076ba34aSJunchao Zhang     So we have to do a fake spgemm_numeric() here to get csrmatC.j_d setup, before
809076ba34aSJunchao Zhang     calling new Mat_SeqAIJKokkos().
810076ba34aSJunchao Zhang     TODO: Remove the fake spgemm_numeric() after KK fixed this problem.
811076ba34aSJunchao Zhang   */
8129566063dSJacob Faibussowitsch   PetscCallCXX(KokkosSparse::spgemm_numeric(pdata->kh,*csrmatA,transA,*csrmatB,transB,csrmatC));
8139566063dSJacob Faibussowitsch   PetscCallCXX(KokkosKernels::sort_crs_matrix(csrmatC));
8149566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
815076ba34aSJunchao Zhang 
8169566063dSJacob Faibussowitsch   PetscCallCXX(ckok = new Mat_SeqAIJKokkos(csrmatC));
8179566063dSJacob Faibussowitsch   PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(C,ckok));
818076ba34aSJunchao Zhang   C->product->destroy = MatProductDataDestroy_SeqAIJKokkos;
819a3f881fbSStefano Zampini   PetscFunctionReturn(0);
820a3f881fbSStefano Zampini }
821a3f881fbSStefano Zampini 
822a3f881fbSStefano Zampini /* handles sparse matrix matrix ops */
823076ba34aSJunchao Zhang static PetscErrorCode MatProductSetFromOptions_SeqAIJKokkos(Mat mat)
824a3f881fbSStefano Zampini {
825076ba34aSJunchao Zhang   Mat_Product    *product = mat->product;
826a3f881fbSStefano Zampini   PetscBool      Biskok = PETSC_FALSE,Ciskok = PETSC_TRUE;
827a3f881fbSStefano Zampini 
828a3f881fbSStefano Zampini   PetscFunctionBegin;
829a3f881fbSStefano Zampini   MatCheckProduct(mat,1);
8309566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)product->B,MATSEQAIJKOKKOS,&Biskok));
831a3f881fbSStefano Zampini   if (product->type == MATPRODUCT_ABC) {
8329566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)product->C,MATSEQAIJKOKKOS,&Ciskok));
833a3f881fbSStefano Zampini   }
834a3f881fbSStefano Zampini   if (Biskok && Ciskok) {
835a3f881fbSStefano Zampini     switch (product->type) {
836a3f881fbSStefano Zampini     case MATPRODUCT_AB:
837a3f881fbSStefano Zampini     case MATPRODUCT_AtB:
838a3f881fbSStefano Zampini     case MATPRODUCT_ABt:
839a3f881fbSStefano Zampini       mat->ops->productsymbolic = MatProductSymbolic_SeqAIJKokkos_SeqAIJKokkos;
840a3f881fbSStefano Zampini       break;
841a3f881fbSStefano Zampini     case MATPRODUCT_PtAP:
842a3f881fbSStefano Zampini     case MATPRODUCT_RARt:
843a3f881fbSStefano Zampini     case MATPRODUCT_ABC:
844a3f881fbSStefano Zampini       mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic;
845a3f881fbSStefano Zampini       break;
846a3f881fbSStefano Zampini     default:
847a3f881fbSStefano Zampini       break;
848a3f881fbSStefano Zampini     }
849a3f881fbSStefano Zampini   } else { /* fallback for AIJ */
8509566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_SeqAIJ(mat));
851a3f881fbSStefano Zampini   }
852a3f881fbSStefano Zampini   PetscFunctionReturn(0);
853a3f881fbSStefano Zampini }
854a587d139SMark 
855f0cf5187SStefano Zampini static PetscErrorCode MatScale_SeqAIJKokkos(Mat A, PetscScalar a)
856f0cf5187SStefano Zampini {
857f0cf5187SStefano Zampini   Mat_SeqAIJKokkos *aijkok;
858f0cf5187SStefano Zampini 
859f0cf5187SStefano Zampini   PetscFunctionBegin;
8609566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
8619566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
862f0cf5187SStefano Zampini   aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
863076ba34aSJunchao Zhang   KokkosBlas::scal(aijkok->a_dual.view_device(),a,aijkok->a_dual.view_device());
8649566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosModifyDevice(A));
8659566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuFlops(aijkok->a_dual.extent(0)));
8669566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
867f0cf5187SStefano Zampini   PetscFunctionReturn(0);
868f0cf5187SStefano Zampini }
869f0cf5187SStefano Zampini 
870a587d139SMark static PetscErrorCode MatZeroEntries_SeqAIJKokkos(Mat A)
871a587d139SMark {
872076ba34aSJunchao Zhang   Mat_SeqAIJKokkos *aijkok;
873a587d139SMark 
874a587d139SMark   PetscFunctionBegin;
875076ba34aSJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
8762328674fSJunchao Zhang   if (aijkok) { /* Only zero the device if data is already there */
877076ba34aSJunchao Zhang     KokkosBlas::fill(aijkok->a_dual.view_device(),0.0);
8789566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosModifyDevice(A));
8792328674fSJunchao Zhang   } else { /* Might be preallocated but not assembled */
8809566063dSJacob Faibussowitsch     PetscCall(MatZeroEntries_SeqAIJ(A));
8812328674fSJunchao Zhang   }
882a587d139SMark   PetscFunctionReturn(0);
883a587d139SMark }
884a587d139SMark 
885db78de30SJunchao Zhang /* Get a Kokkos View from a mat of type MatSeqAIJKokkos */
88642550becSJunchao Zhang PetscErrorCode MatSeqAIJGetKokkosView(Mat A,ConstMatScalarKokkosView* kv)
887db78de30SJunchao Zhang {
888db78de30SJunchao Zhang   Mat_SeqAIJKokkos   *aijkok;
889db78de30SJunchao Zhang 
890db78de30SJunchao Zhang   PetscFunctionBegin;
891db78de30SJunchao Zhang   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
892db78de30SJunchao Zhang   PetscValidPointer(kv,2);
893db78de30SJunchao Zhang   PetscCheckTypeName(A,MATSEQAIJKOKKOS);
8949566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
895db78de30SJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
896076ba34aSJunchao Zhang   *kv    = aijkok->a_dual.view_device();
897db78de30SJunchao Zhang   PetscFunctionReturn(0);
898db78de30SJunchao Zhang }
899db78de30SJunchao Zhang 
90042550becSJunchao Zhang PetscErrorCode MatSeqAIJRestoreKokkosView(Mat A,ConstMatScalarKokkosView* kv)
901db78de30SJunchao Zhang {
902db78de30SJunchao Zhang   PetscFunctionBegin;
903db78de30SJunchao Zhang   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
904db78de30SJunchao Zhang   PetscValidPointer(kv,2);
905db78de30SJunchao Zhang   PetscCheckTypeName(A,MATSEQAIJKOKKOS);
906db78de30SJunchao Zhang   PetscFunctionReturn(0);
907db78de30SJunchao Zhang }
908db78de30SJunchao Zhang 
90942550becSJunchao Zhang PetscErrorCode MatSeqAIJGetKokkosView(Mat A,MatScalarKokkosView* kv)
910db78de30SJunchao Zhang {
911db78de30SJunchao Zhang   Mat_SeqAIJKokkos   *aijkok;
912db78de30SJunchao Zhang 
913db78de30SJunchao Zhang   PetscFunctionBegin;
914db78de30SJunchao Zhang   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
915db78de30SJunchao Zhang   PetscValidPointer(kv,2);
916db78de30SJunchao Zhang   PetscCheckTypeName(A,MATSEQAIJKOKKOS);
9179566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
918db78de30SJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
919076ba34aSJunchao Zhang   *kv    = aijkok->a_dual.view_device();
920db78de30SJunchao Zhang   PetscFunctionReturn(0);
921db78de30SJunchao Zhang }
922db78de30SJunchao Zhang 
92342550becSJunchao Zhang PetscErrorCode MatSeqAIJRestoreKokkosView(Mat A,MatScalarKokkosView* kv)
924db78de30SJunchao Zhang {
925db78de30SJunchao Zhang   PetscFunctionBegin;
926db78de30SJunchao Zhang   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
927db78de30SJunchao Zhang   PetscValidPointer(kv,2);
928db78de30SJunchao Zhang   PetscCheckTypeName(A,MATSEQAIJKOKKOS);
9299566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosModifyDevice(A));
930db78de30SJunchao Zhang   PetscFunctionReturn(0);
931db78de30SJunchao Zhang }
932db78de30SJunchao Zhang 
93342550becSJunchao Zhang PetscErrorCode MatSeqAIJGetKokkosViewWrite(Mat A,MatScalarKokkosView* kv)
934db78de30SJunchao Zhang {
935db78de30SJunchao Zhang   Mat_SeqAIJKokkos   *aijkok;
936db78de30SJunchao Zhang 
937db78de30SJunchao Zhang   PetscFunctionBegin;
938db78de30SJunchao Zhang   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
939db78de30SJunchao Zhang   PetscValidPointer(kv,2);
940db78de30SJunchao Zhang   PetscCheckTypeName(A,MATSEQAIJKOKKOS);
941db78de30SJunchao Zhang   aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
942076ba34aSJunchao Zhang   *kv    = aijkok->a_dual.view_device();
943db78de30SJunchao Zhang   PetscFunctionReturn(0);
944db78de30SJunchao Zhang }
945db78de30SJunchao Zhang 
94642550becSJunchao Zhang PetscErrorCode MatSeqAIJRestoreKokkosViewWrite(Mat A,MatScalarKokkosView* kv)
947db78de30SJunchao Zhang {
948db78de30SJunchao Zhang   PetscFunctionBegin;
949db78de30SJunchao Zhang   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
950db78de30SJunchao Zhang   PetscValidPointer(kv,2);
951db78de30SJunchao Zhang   PetscCheckTypeName(A,MATSEQAIJKOKKOS);
9529566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosModifyDevice(A));
953db78de30SJunchao Zhang   PetscFunctionReturn(0);
954db78de30SJunchao Zhang }
955db78de30SJunchao Zhang 
956c17cf699SJunchao Zhang /* Computes Y += alpha X */
957c17cf699SJunchao Zhang static PetscErrorCode MatAXPY_SeqAIJKokkos(Mat Y,PetscScalar alpha,Mat X,MatStructure pattern)
958a587d139SMark {
959a587d139SMark   Mat_SeqAIJ                 *x = (Mat_SeqAIJ*)X->data,*y = (Mat_SeqAIJ*)Y->data;
960c17cf699SJunchao Zhang   Mat_SeqAIJKokkos           *xkok,*ykok,*zkok;
961c17cf699SJunchao Zhang   ConstMatScalarKokkosView   Xa;
962c17cf699SJunchao Zhang   MatScalarKokkosView        Ya;
963a587d139SMark 
964a587d139SMark   PetscFunctionBegin;
965c17cf699SJunchao Zhang   PetscCheckTypeName(Y,MATSEQAIJKOKKOS);
966c17cf699SJunchao Zhang   PetscCheckTypeName(X,MATSEQAIJKOKKOS);
9679566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(Y));
9689566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(X));
9699566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
970db78de30SJunchao Zhang 
971c17cf699SJunchao Zhang   if (pattern != SAME_NONZERO_PATTERN && x->nz == y->nz) {
972c17cf699SJunchao Zhang     /* We could compare on device, but have to get the comparison result on host. So compare on host instead. */
973a587d139SMark     PetscBool e;
9749566063dSJacob Faibussowitsch     PetscCall(PetscArraycmp(x->i,y->i,Y->rmap->n+1,&e));
975a587d139SMark     if (e) {
9769566063dSJacob Faibussowitsch       PetscCall(PetscArraycmp(x->j,y->j,y->nz,&e));
977c17cf699SJunchao Zhang       if (e) pattern = SAME_NONZERO_PATTERN;
978a587d139SMark     }
979a587d139SMark   }
980db78de30SJunchao Zhang 
981c17cf699SJunchao Zhang   /* cusparseDcsrgeam2() computes C = alpha A + beta B. If one knew sparsity pattern of C, one can skip
982c17cf699SJunchao Zhang     cusparseScsrgeam2_bufferSizeExt() / cusparseXcsrgeam2Nnz(), and directly call cusparseScsrgeam2().
983c17cf699SJunchao Zhang     If X is SUBSET_NONZERO_PATTERN of Y, we could take advantage of this cusparse feature. However,
984c17cf699SJunchao Zhang     KokkosSparse::spadd(alpha,A,beta,B,C) has symbolic and numeric phases, MatAXPY does not.
985c17cf699SJunchao Zhang   */
986c17cf699SJunchao Zhang   ykok = static_cast<Mat_SeqAIJKokkos*>(Y->spptr);
987c17cf699SJunchao Zhang   xkok = static_cast<Mat_SeqAIJKokkos*>(X->spptr);
988c17cf699SJunchao Zhang   Xa   = xkok->a_dual.view_device();
989c17cf699SJunchao Zhang   Ya   = ykok->a_dual.view_device();
990c17cf699SJunchao Zhang 
991c17cf699SJunchao Zhang   if (pattern == SAME_NONZERO_PATTERN) {
992c17cf699SJunchao Zhang     KokkosBlas::axpy(alpha,Xa,Ya);
9939566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosModifyDevice(Y));
994c17cf699SJunchao Zhang   } else if (pattern == SUBSET_NONZERO_PATTERN) {
995c17cf699SJunchao Zhang     MatRowMapKokkosView  Xi = xkok->i_dual.view_device(),Yi = ykok->i_dual.view_device();
996c17cf699SJunchao Zhang     MatColIdxKokkosView  Xj = xkok->j_dual.view_device(),Yj = ykok->j_dual.view_device();
997c17cf699SJunchao Zhang 
998c17cf699SJunchao Zhang     Kokkos::parallel_for(Kokkos::TeamPolicy<>(Y->rmap->n, 1),KOKKOS_LAMBDA(const KokkosTeamMemberType& t) {
999c17cf699SJunchao Zhang       PetscInt i = t.league_rank(); /* row i */
1000c17cf699SJunchao Zhang       Kokkos::single(Kokkos::PerTeam(t), [=] () { /* Only one thread works in a team */
1001c17cf699SJunchao Zhang         PetscInt p,q = Yi(i);
1002c17cf699SJunchao Zhang         for (p=Xi(i); p<Xi(i+1); p++) { /* For each nonzero on row i of X */
1003c17cf699SJunchao Zhang           while (Xj(p) != Yj(q) && q < Yi(i+1)) q++; /* find the matching nonzero on row i of Y */
1004c17cf699SJunchao Zhang           if (Xj(p) == Yj(q)) { /* Found it */
1005c17cf699SJunchao Zhang             Ya(q) += alpha * Xa(p);
1006c17cf699SJunchao Zhang             q++;
1007a587d139SMark           } else {
1008c17cf699SJunchao Zhang             /* If not found, it indicates the input is wrong (X is not a SUBSET_NONZERO_PATTERN of Y).
1009c17cf699SJunchao Zhang                Just insert a NaN at the beginning of row i if it is not empty, to make the result wrong.
1010c17cf699SJunchao Zhang             */
1011c17cf699SJunchao Zhang             if (Yi(i) != Yi(i+1)) Ya(Yi(i)) = Kokkos::Experimental::nan("1"); /* auto promote the double NaN if needed */
1012a587d139SMark           }
1013c17cf699SJunchao Zhang         }
1014c17cf699SJunchao Zhang       });
1015c17cf699SJunchao Zhang     });
10169566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJKokkosModifyDevice(Y));
1017c17cf699SJunchao Zhang   } else { /* different nonzero patterns */
1018c17cf699SJunchao Zhang     Mat             Z;
1019c17cf699SJunchao Zhang     KokkosCsrMatrix zcsr;
1020c17cf699SJunchao Zhang     KernelHandle    kh;
1021c17cf699SJunchao Zhang     kh.create_spadd_handle(false);
1022c17cf699SJunchao Zhang     KokkosSparse::spadd_symbolic(&kh,xkok->csrmat,ykok->csrmat,zcsr);
1023c17cf699SJunchao Zhang     KokkosSparse::spadd_numeric(&kh,alpha,xkok->csrmat,(PetscScalar)1.0,ykok->csrmat,zcsr);
1024c17cf699SJunchao Zhang     zkok = new Mat_SeqAIJKokkos(zcsr);
10259566063dSJacob Faibussowitsch     PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF,zkok,&Z));
10269566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(Y,&Z));
1027c17cf699SJunchao Zhang     kh.destroy_spadd_handle();
1028c17cf699SJunchao Zhang   }
10299566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
10309566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuFlops(xkok->a_dual.extent(0)*2)); /* Because we scaled X and then added it to Y */
1031a587d139SMark   PetscFunctionReturn(0);
1032a587d139SMark }
1033a587d139SMark 
1034394ed5ebSJunchao Zhang static PetscErrorCode MatSetPreallocationCOO_SeqAIJKokkos(Mat mat, PetscCount coo_n, const PetscInt coo_i[], const PetscInt coo_j[])
103542550becSJunchao Zhang {
103642550becSJunchao Zhang   Mat_SeqAIJKokkos *akok;
103742550becSJunchao Zhang   Mat_SeqAIJ       *aseq;
103842550becSJunchao Zhang 
103942550becSJunchao Zhang   PetscFunctionBegin;
10409566063dSJacob Faibussowitsch   PetscCall(MatSetPreallocationCOO_SeqAIJ(mat,coo_n,coo_i,coo_j));
1041394ed5ebSJunchao Zhang   aseq = static_cast<Mat_SeqAIJ*>(mat->data);
104242550becSJunchao Zhang   akok = static_cast<Mat_SeqAIJKokkos*>(mat->spptr);
1043cbc6b225SStefano Zampini   delete akok;
1044cbc6b225SStefano Zampini   mat->spptr = akok = new Mat_SeqAIJKokkos(mat->rmap->n,mat->cmap->n,aseq->nz,aseq->i,aseq->j,aseq->a,mat->nonzerostate+1,PETSC_FALSE);
10459566063dSJacob Faibussowitsch   PetscCall(MatZeroEntries_SeqAIJKokkos(mat));
1046394ed5ebSJunchao Zhang   akok->SetUpCOO(aseq);
104742550becSJunchao Zhang   PetscFunctionReturn(0);
104842550becSJunchao Zhang }
104942550becSJunchao Zhang 
105042550becSJunchao Zhang static PetscErrorCode MatSetValuesCOO_SeqAIJKokkos(Mat A,const PetscScalar v[],InsertMode imode)
105142550becSJunchao Zhang {
105242550becSJunchao Zhang   Mat_SeqAIJ                  *aseq = static_cast<Mat_SeqAIJ*>(A->data);
105342550becSJunchao Zhang   Mat_SeqAIJKokkos            *akok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
1054394ed5ebSJunchao Zhang   PetscCount                  Annz = aseq->nz;
1055394ed5ebSJunchao Zhang   const PetscCountKokkosView& jmap = akok->jmap_d;
1056394ed5ebSJunchao Zhang   const PetscCountKokkosView& perm = akok->perm_d;
105742550becSJunchao Zhang   MatScalarKokkosView         Aa;
105842550becSJunchao Zhang   ConstMatScalarKokkosView    kv;
105942550becSJunchao Zhang   PetscMemType                memtype;
106042550becSJunchao Zhang 
106142550becSJunchao Zhang   PetscFunctionBegin;
10629566063dSJacob Faibussowitsch   PetscCall(PetscGetMemType(v,&memtype));
106342550becSJunchao Zhang   if (PetscMemTypeHost(memtype)) { /* If user gave v[] in host, we might need to copy it to device if any */
1064394ed5ebSJunchao Zhang     kv = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(),ConstMatScalarKokkosViewHost(v,aseq->coo_n));
106542550becSJunchao Zhang   } else {
1066394ed5ebSJunchao Zhang     kv = ConstMatScalarKokkosView(v,aseq->coo_n); /* Directly use v[]'s memory */
106742550becSJunchao Zhang   }
106842550becSJunchao Zhang 
1069cbc6b225SStefano Zampini   if (imode == INSERT_VALUES) {
10709566063dSJacob Faibussowitsch     PetscCall(MatSeqAIJGetKokkosViewWrite(A,&Aa)); /* write matrix values */
1071cbc6b225SStefano Zampini     Kokkos::deep_copy(Aa,0.0); /* Zero matrix values since INSERT_VALUES still requires summing replicated values in v[] */
10729566063dSJacob Faibussowitsch   } else PetscCall(MatSeqAIJGetKokkosView(A,&Aa)); /* read & write matrix values */
107342550becSJunchao Zhang 
1074cbc6b225SStefano Zampini   Kokkos::parallel_for(Annz,KOKKOS_LAMBDA(const PetscCount i) {for (PetscCount k=jmap(i); k<jmap(i+1); k++) Aa(i) += kv(perm(k));});
1075394ed5ebSJunchao Zhang 
10769566063dSJacob Faibussowitsch   if (imode == INSERT_VALUES) PetscCall(MatSeqAIJRestoreKokkosViewWrite(A,&Aa));
10779566063dSJacob Faibussowitsch   else PetscCall(MatSeqAIJRestoreKokkosView(A,&Aa));
107842550becSJunchao Zhang   PetscFunctionReturn(0);
107942550becSJunchao Zhang }
108042550becSJunchao Zhang 
10815fbaff96SJunchao Zhang PETSC_INTERN PetscErrorCode MatSeqAIJMoveDiagonalValuesFront_SeqAIJKokkos(Mat A,const PetscInt *diag)
10825fbaff96SJunchao Zhang {
10835fbaff96SJunchao Zhang   Mat_SeqAIJKokkos            *akok = static_cast<Mat_SeqAIJKokkos*>(A->spptr);
10845fbaff96SJunchao Zhang   MatScalarKokkosView         Aa;
10855fbaff96SJunchao Zhang   const MatRowMapKokkosView&  Ai = akok->i_dual.view_device();
10865fbaff96SJunchao Zhang   PetscInt                    m = A->rmap->n;
10875fbaff96SJunchao Zhang   ConstMatRowMapKokkosView    Adiag(diag,m); /* diag is a device pointer */
10885fbaff96SJunchao Zhang 
10895fbaff96SJunchao Zhang   PetscFunctionBegin;
10905fbaff96SJunchao Zhang   PetscCall(MatSeqAIJGetKokkosViewWrite(A,&Aa));
10915fbaff96SJunchao Zhang   Kokkos::parallel_for(m,KOKKOS_LAMBDA(const PetscInt i) {
10925fbaff96SJunchao Zhang     PetscScalar tmp;
10935fbaff96SJunchao Zhang     if (Adiag(i) >= Ai(i) && Adiag(i) < Ai(i+1)) { /* The diagonal element exists */
10945fbaff96SJunchao Zhang       tmp          = Aa(Ai(i));
10955fbaff96SJunchao Zhang       Aa(Ai(i))    = Aa(Adiag(i));
10965fbaff96SJunchao Zhang       Aa(Adiag(i)) = tmp;
10975fbaff96SJunchao Zhang     }
10985fbaff96SJunchao Zhang   });
10995fbaff96SJunchao Zhang   PetscCall(MatSeqAIJRestoreKokkosViewWrite(A,&Aa));
11005fbaff96SJunchao Zhang   PetscFunctionReturn(0);
11015fbaff96SJunchao Zhang }
11025fbaff96SJunchao Zhang 
110386a27549SJunchao Zhang static PetscErrorCode MatLUFactorNumeric_SeqAIJKokkos(Mat B,Mat A,const MatFactorInfo *info)
11048f7e8f9dSMark Adams {
11058f7e8f9dSMark Adams   PetscFunctionBegin;
11069566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncHost(A));
11079566063dSJacob Faibussowitsch   PetscCall(MatLUFactorNumeric_SeqAIJ(B,A,info));
11088f7e8f9dSMark Adams   B->offloadmask = PETSC_OFFLOAD_CPU;
11098f7e8f9dSMark Adams   PetscFunctionReturn(0);
11108f7e8f9dSMark Adams }
11118f7e8f9dSMark Adams 
11128c3ff71bSJunchao Zhang static PetscErrorCode MatSetOps_SeqAIJKokkos(Mat A)
11138c3ff71bSJunchao Zhang {
1114076ba34aSJunchao Zhang   Mat_SeqAIJ         *a = (Mat_SeqAIJ*)A->data;
1115076ba34aSJunchao Zhang 
11168c3ff71bSJunchao Zhang   PetscFunctionBegin;
1117076ba34aSJunchao Zhang   A->offloadmask = PETSC_OFFLOAD_KOKKOS; /* We do not really use this flag */
11186f3d89d0SStefano Zampini   A->boundtocpu  = PETSC_FALSE;
11196f3d89d0SStefano Zampini 
11208c3ff71bSJunchao Zhang   A->ops->assemblyend               = MatAssemblyEnd_SeqAIJKokkos;
11218c3ff71bSJunchao Zhang   A->ops->destroy                   = MatDestroy_SeqAIJKokkos;
11228c3ff71bSJunchao Zhang   A->ops->duplicate                 = MatDuplicate_SeqAIJKokkos;
1123a587d139SMark   A->ops->axpy                      = MatAXPY_SeqAIJKokkos;
1124f0cf5187SStefano Zampini   A->ops->scale                     = MatScale_SeqAIJKokkos;
1125a587d139SMark   A->ops->zeroentries               = MatZeroEntries_SeqAIJKokkos;
1126076ba34aSJunchao Zhang   A->ops->productsetfromoptions     = MatProductSetFromOptions_SeqAIJKokkos;
11278c3ff71bSJunchao Zhang   A->ops->mult                      = MatMult_SeqAIJKokkos;
11288c3ff71bSJunchao Zhang   A->ops->multadd                   = MatMultAdd_SeqAIJKokkos;
11298c3ff71bSJunchao Zhang   A->ops->multtranspose             = MatMultTranspose_SeqAIJKokkos;
11308c3ff71bSJunchao Zhang   A->ops->multtransposeadd          = MatMultTransposeAdd_SeqAIJKokkos;
11318c3ff71bSJunchao Zhang   A->ops->multhermitiantranspose    = MatMultHermitianTranspose_SeqAIJKokkos;
11328c3ff71bSJunchao Zhang   A->ops->multhermitiantransposeadd = MatMultHermitianTransposeAdd_SeqAIJKokkos;
1133076ba34aSJunchao Zhang   A->ops->productnumeric            = MatProductNumeric_SeqAIJKokkos_SeqAIJKokkos;
11340ecb592aSJunchao Zhang   A->ops->transpose                 = MatTranspose_SeqAIJKokkos;
1135152b3e56SJunchao Zhang   A->ops->setoption                 = MatSetOption_SeqAIJKokkos;
1136076ba34aSJunchao Zhang   a->ops->getarray                  = MatSeqAIJGetArray_SeqAIJKokkos;
1137076ba34aSJunchao Zhang   a->ops->restorearray              = MatSeqAIJRestoreArray_SeqAIJKokkos;
1138076ba34aSJunchao Zhang   a->ops->getarrayread              = MatSeqAIJGetArrayRead_SeqAIJKokkos;
1139076ba34aSJunchao Zhang   a->ops->restorearrayread          = MatSeqAIJRestoreArrayRead_SeqAIJKokkos;
1140076ba34aSJunchao Zhang   a->ops->getarraywrite             = MatSeqAIJGetArrayWrite_SeqAIJKokkos;
1141076ba34aSJunchao Zhang   a->ops->restorearraywrite         = MatSeqAIJRestoreArrayWrite_SeqAIJKokkos;
11427ee59b9bSJunchao Zhang   a->ops->getcsrandmemtype          = MatSeqAIJGetCSRAndMemType_SeqAIJKokkos;
114342550becSJunchao Zhang 
11449566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",MatSetPreallocationCOO_SeqAIJKokkos));
11459566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",MatSetValuesCOO_SeqAIJKokkos));
1146076ba34aSJunchao Zhang   PetscFunctionReturn(0);
1147076ba34aSJunchao Zhang }
1148076ba34aSJunchao Zhang 
1149076ba34aSJunchao Zhang PETSC_INTERN PetscErrorCode  MatSetSeqAIJKokkosWithCSRMatrix(Mat A,Mat_SeqAIJKokkos *akok)
1150076ba34aSJunchao Zhang {
1151076ba34aSJunchao Zhang   Mat_SeqAIJ *aseq;
1152076ba34aSJunchao Zhang   PetscInt    i,m,n;
1153076ba34aSJunchao Zhang 
1154076ba34aSJunchao Zhang   PetscFunctionBegin;
11555f80ce2aSJacob Faibussowitsch   PetscCheck(!A->spptr,PETSC_COMM_SELF,PETSC_ERR_PLIB,"A->spptr is supposed to be empty");
1156076ba34aSJunchao Zhang 
1157076ba34aSJunchao Zhang   m = akok->nrows();
1158076ba34aSJunchao Zhang   n = akok->ncols();
11599566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(A,m,n,m,n));
11609566063dSJacob Faibussowitsch   PetscCall(MatSetType(A,MATSEQAIJKOKKOS));
1161076ba34aSJunchao Zhang 
1162076ba34aSJunchao Zhang   /* Set up data structures of A as a MATSEQAIJ */
11639566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(A,MAT_SKIP_ALLOCATION,NULL));
1164076ba34aSJunchao Zhang   aseq = (Mat_SeqAIJ*)(A)->data;
1165076ba34aSJunchao Zhang 
1166076ba34aSJunchao Zhang   akok->i_dual.sync_host(); /* We always need sync'ed i, j on host */
1167076ba34aSJunchao Zhang   akok->j_dual.sync_host();
1168076ba34aSJunchao Zhang 
1169076ba34aSJunchao Zhang   aseq->i            = akok->i_host_data();
1170076ba34aSJunchao Zhang   aseq->j            = akok->j_host_data();
1171076ba34aSJunchao Zhang   aseq->a            = akok->a_host_data();
1172076ba34aSJunchao Zhang   aseq->nonew        = -1; /*this indicates that inserting a new value in the matrix that generates a new nonzero is an error*/
1173076ba34aSJunchao Zhang   aseq->singlemalloc = PETSC_FALSE;
1174076ba34aSJunchao Zhang   aseq->free_a       = PETSC_FALSE;
1175076ba34aSJunchao Zhang   aseq->free_ij      = PETSC_FALSE;
1176076ba34aSJunchao Zhang   aseq->nz           = akok->nnz();
1177076ba34aSJunchao Zhang   aseq->maxnz        = aseq->nz;
1178076ba34aSJunchao Zhang 
11799566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(m,&aseq->imax));
11809566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(m,&aseq->ilen));
1181076ba34aSJunchao Zhang   for (i=0; i<m; i++) {
1182076ba34aSJunchao Zhang     aseq->ilen[i] = aseq->imax[i] = aseq->i[i+1] - aseq->i[i];
1183076ba34aSJunchao Zhang   }
1184076ba34aSJunchao Zhang 
1185076ba34aSJunchao Zhang   /* It is critical to set the nonzerostate, as we use it to check if sparsity pattern (hence data) has changed on host in MatAssemblyEnd */
1186076ba34aSJunchao Zhang   akok->nonzerostate = A->nonzerostate;
1187ff751488SJunchao Zhang   A->spptr = akok; /* Set A->spptr before MatAssembly so that A->spptr won't be allocated again there */
11889566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY));
11899566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY));
1190076ba34aSJunchao Zhang   PetscFunctionReturn(0);
1191076ba34aSJunchao Zhang }
1192076ba34aSJunchao Zhang 
1193076ba34aSJunchao Zhang /* Crete a SEQAIJKOKKOS matrix with a Mat_SeqAIJKokkos data structure
1194076ba34aSJunchao Zhang 
1195076ba34aSJunchao Zhang    Note we have names like MatSeqAIJSetPreallocationCSR, so I use capitalized CSR
1196076ba34aSJunchao Zhang  */
1197076ba34aSJunchao Zhang PETSC_INTERN PetscErrorCode  MatCreateSeqAIJKokkosWithCSRMatrix(MPI_Comm comm,Mat_SeqAIJKokkos *akok,Mat *A)
1198076ba34aSJunchao Zhang {
1199076ba34aSJunchao Zhang   PetscFunctionBegin;
12009566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm,A));
12019566063dSJacob Faibussowitsch   PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(*A,akok));
12028c3ff71bSJunchao Zhang   PetscFunctionReturn(0);
12038c3ff71bSJunchao Zhang }
12048c3ff71bSJunchao Zhang 
12058c3ff71bSJunchao Zhang /* --------------------------------------------------------------------------------*/
1206152b3e56SJunchao Zhang /*@C
12078c3ff71bSJunchao Zhang    MatCreateSeqAIJKokkos - Creates a sparse matrix in AIJ (compressed row) format
12088c3ff71bSJunchao Zhang    (the default parallel PETSc format). This matrix will ultimately be handled by
12098c3ff71bSJunchao Zhang    Kokkos for calculations. For good matrix
12108c3ff71bSJunchao Zhang    assembly performance the user should preallocate the matrix storage by setting
12118c3ff71bSJunchao Zhang    the parameter nz (or the array nnz).  By setting these parameters accurately,
12128c3ff71bSJunchao Zhang    performance during matrix assembly can be increased by more than a factor of 50.
12138c3ff71bSJunchao Zhang 
12148c3ff71bSJunchao Zhang    Collective
12158c3ff71bSJunchao Zhang 
12168c3ff71bSJunchao Zhang    Input Parameters:
12178c3ff71bSJunchao Zhang +  comm - MPI communicator, set to PETSC_COMM_SELF
12188c3ff71bSJunchao Zhang .  m - number of rows
12198c3ff71bSJunchao Zhang .  n - number of columns
12208c3ff71bSJunchao Zhang .  nz - number of nonzeros per row (same for all rows)
12218c3ff71bSJunchao Zhang -  nnz - array containing the number of nonzeros in the various rows
12228c3ff71bSJunchao Zhang          (possibly different for each row) or NULL
12238c3ff71bSJunchao Zhang 
12248c3ff71bSJunchao Zhang    Output Parameter:
12258c3ff71bSJunchao Zhang .  A - the matrix
12268c3ff71bSJunchao Zhang 
12278c3ff71bSJunchao Zhang    It is recommended that one use the MatCreate(), MatSetType() and/or MatSetFromOptions(),
12288c3ff71bSJunchao Zhang    MatXXXXSetPreallocation() paradgm instead of this routine directly.
12298c3ff71bSJunchao Zhang    [MatXXXXSetPreallocation() is, for example, MatSeqAIJSetPreallocation]
12308c3ff71bSJunchao Zhang 
12318c3ff71bSJunchao Zhang    Notes:
12328c3ff71bSJunchao Zhang    If nnz is given then nz is ignored
12338c3ff71bSJunchao Zhang 
12348c3ff71bSJunchao Zhang    The AIJ format (also called the Yale sparse matrix format or
12358c3ff71bSJunchao Zhang    compressed row storage), is fully compatible with standard Fortran 77
12368c3ff71bSJunchao Zhang    storage.  That is, the stored row and column indices can begin at
12378c3ff71bSJunchao Zhang    either one (as in Fortran) or zero.  See the users' manual for details.
12388c3ff71bSJunchao Zhang 
12398c3ff71bSJunchao Zhang    Specify the preallocated storage with either nz or nnz (not both).
12408c3ff71bSJunchao Zhang    Set nz=PETSC_DEFAULT and nnz=NULL for PETSc to control dynamic memory
12418c3ff71bSJunchao Zhang    allocation.  For large problems you MUST preallocate memory or you
12428c3ff71bSJunchao Zhang    will get TERRIBLE performance, see the users' manual chapter on matrices.
12438c3ff71bSJunchao Zhang 
12448c3ff71bSJunchao Zhang    By default, this format uses inodes (identical nodes) when possible, to
12458c3ff71bSJunchao Zhang    improve numerical efficiency of matrix-vector products and solves. We
12468c3ff71bSJunchao Zhang    search for consecutive rows with the same nonzero structure, thereby
12478c3ff71bSJunchao Zhang    reusing matrix information to achieve increased efficiency.
12488c3ff71bSJunchao Zhang 
12498c3ff71bSJunchao Zhang    Level: intermediate
12508c3ff71bSJunchao Zhang 
1251db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateAIJ()`, `MatSetValues()`, `MatSeqAIJSetColumnIndices()`, `MatCreateSeqAIJWithArrays()`, `MatCreateAIJ()`
12528c3ff71bSJunchao Zhang @*/
12538c3ff71bSJunchao Zhang PetscErrorCode  MatCreateSeqAIJKokkos(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt nz,const PetscInt nnz[],Mat *A)
12548c3ff71bSJunchao Zhang {
12558c3ff71bSJunchao Zhang   PetscFunctionBegin;
12569566063dSJacob Faibussowitsch   PetscCall(PetscKokkosInitializeCheck());
12579566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm,A));
12589566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A,m,n,m,n));
12599566063dSJacob Faibussowitsch   PetscCall(MatSetType(*A,MATSEQAIJKOKKOS));
12609566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(*A,nz,(PetscInt*)nnz));
12618c3ff71bSJunchao Zhang   PetscFunctionReturn(0);
12628c3ff71bSJunchao Zhang }
1263930e68a5SMark Adams 
12648f7e8f9dSMark Adams typedef Kokkos::TeamPolicy<>::member_type team_member;
12658f7e8f9dSMark Adams //
126646804e07SMark Adams // This factorization exploits block diagonal matrices with "Nf" (not used).
12678f7e8f9dSMark Adams // Use -pc_factor_mat_ordering_type rcm to order decouple blocks of size N/Nf for this optimization
12688f7e8f9dSMark Adams //
12698f7e8f9dSMark Adams static PetscErrorCode MatLUFactorNumeric_SeqAIJKOKKOSDEVICE(Mat B,Mat A,const MatFactorInfo *info)
1270930e68a5SMark Adams {
12718f7e8f9dSMark Adams   Mat_SeqAIJ         *b=(Mat_SeqAIJ*)B->data;
12728f7e8f9dSMark Adams   Mat_SeqAIJKokkos   *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr), *baijkok = static_cast<Mat_SeqAIJKokkos*>(B->spptr);
12738f7e8f9dSMark Adams   IS                 isrow = b->row,isicol = b->icol;
12748f7e8f9dSMark Adams   const PetscInt     *r_h,*ic_h;
1275300d22a6SJunchao Zhang   const PetscInt     n=A->rmap->n, *ai_d=aijkok->i_dual.view_device().data(), *aj_d=aijkok->j_dual.view_device().data(), *bi_d=baijkok->i_dual.view_device().data(), *bj_d=baijkok->j_dual.view_device().data(), *bdiag_d = baijkok->diag_d.data();
1276076ba34aSJunchao Zhang   const PetscScalar  *aa_d = aijkok->a_dual.view_device().data();
1277076ba34aSJunchao Zhang   PetscScalar        *ba_d = baijkok->a_dual.view_device().data();
12788f7e8f9dSMark Adams   PetscBool          row_identity,col_identity;
127946804e07SMark Adams   PetscInt           nc, Nf=1, nVec=32; // should be a parameter, Nf is batch size - not used
1280930e68a5SMark Adams 
1281930e68a5SMark Adams   PetscFunctionBegin;
12822c71b3e2SJacob Faibussowitsch   PetscCheck(A->rmap->n == n,PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"square matrices only supported %" PetscInt_FMT " %" PetscInt_FMT,A->rmap->n,n);
12839566063dSJacob Faibussowitsch   PetscCall(MatGetOption(A,MAT_STRUCTURALLY_SYMMETRIC,&row_identity));
12842c71b3e2SJacob Faibussowitsch   PetscCheck(row_identity,PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"structurally symmetric matrices only supported");
12859566063dSJacob Faibussowitsch   PetscCall(ISGetIndices(isrow,&r_h));
12869566063dSJacob Faibussowitsch   PetscCall(ISGetIndices(isicol,&ic_h));
12879566063dSJacob Faibussowitsch   PetscCall(ISGetSize(isicol,&nc));
12889566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
12899566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
12908f7e8f9dSMark Adams   {
12918f7e8f9dSMark Adams #define KOKKOS_SHARED_LEVEL 1
12928f7e8f9dSMark Adams     using scr_mem_t = Kokkos::DefaultExecutionSpace::scratch_memory_space;
12938f7e8f9dSMark Adams     using sizet_scr_t = Kokkos::View<size_t, scr_mem_t>;
12948f7e8f9dSMark Adams     using scalar_scr_t = Kokkos::View<PetscScalar, scr_mem_t>;
12958f7e8f9dSMark Adams     const Kokkos::View<const PetscInt*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_r_k (r_h, n);
12968f7e8f9dSMark Adams     Kokkos::View<PetscInt*, Kokkos::LayoutLeft> d_r_k ("r", n);
12978f7e8f9dSMark Adams     const Kokkos::View<const PetscInt*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_ic_k (ic_h, nc);
12988f7e8f9dSMark Adams     Kokkos::View<PetscInt*, Kokkos::LayoutLeft> d_ic_k ("ic", nc);
12998f7e8f9dSMark Adams     size_t flops_h = 0.0;
13008f7e8f9dSMark Adams     Kokkos::View<size_t, Kokkos::HostSpace> h_flops_k (&flops_h);
13018f7e8f9dSMark Adams     Kokkos::View<size_t> d_flops_k ("flops");
13028f7e8f9dSMark Adams     const int conc = Kokkos::DefaultExecutionSpace().concurrency(), team_size = conc > 1 ? 16 : 1; // 8*32 = 256
13038f7e8f9dSMark Adams     const int nloc = n/Nf, Ni = (conc > 8) ? 1 /* some intelegent number of SMs -- but need league_barrier */ : 1;
13048f7e8f9dSMark Adams     Kokkos::deep_copy (d_flops_k, h_flops_k);
13058f7e8f9dSMark Adams     Kokkos::deep_copy (d_r_k, h_r_k);
13068f7e8f9dSMark Adams     Kokkos::deep_copy (d_ic_k, h_ic_k);
13078f7e8f9dSMark Adams     // Fill A --> fact
13088f7e8f9dSMark Adams     Kokkos::parallel_for(Kokkos::TeamPolicy<>(Nf*Ni, team_size, nVec), KOKKOS_LAMBDA (const team_member team) {
1309042217e8SBarry Smith         const PetscInt  field = team.league_rank()/Ni, field_block = team.league_rank()%Ni; // use grid.x/y in CUDA
13108f7e8f9dSMark Adams         const PetscInt  nloc_i =  (nloc/Ni + !!(nloc%Ni)), start_i = field*nloc + field_block*nloc_i, end_i = (start_i + nloc_i) > (field+1)*nloc ? (field+1)*nloc : (start_i + nloc_i);
13118f7e8f9dSMark Adams         const PetscInt  *ic = d_ic_k.data(), *r = d_r_k.data();
13128f7e8f9dSMark Adams         // zero rows of B
13138f7e8f9dSMark Adams         Kokkos::parallel_for(Kokkos::TeamVectorRange(team, start_i, end_i), [=] (const int &rowb) {
13148f7e8f9dSMark Adams             PetscInt    nzbL = bi_d[rowb+1] - bi_d[rowb], nzbU = bdiag_d[rowb] - bdiag_d[rowb+1]; // with diag
13158f7e8f9dSMark Adams             PetscScalar *baL = ba_d + bi_d[rowb];
13168f7e8f9dSMark Adams             PetscScalar *baU = ba_d + bdiag_d[rowb+1]+1;
13178f7e8f9dSMark Adams             /* zero (unfactored row) */
13188f7e8f9dSMark Adams             for (int j=0;j<nzbL;j++) baL[j] = 0;
13198f7e8f9dSMark Adams             for (int j=0;j<nzbU;j++) baU[j] = 0;
13208f7e8f9dSMark Adams           });
13218f7e8f9dSMark Adams         // copy A into B
13228f7e8f9dSMark Adams         Kokkos::parallel_for(Kokkos::TeamVectorRange(team, start_i, end_i), [=] (const int &rowb) {
13238f7e8f9dSMark Adams             PetscInt          rowa = r[rowb], nza = ai_d[rowa+1] - ai_d[rowa];
13248f7e8f9dSMark Adams             const PetscScalar *av    = aa_d + ai_d[rowa];
13258f7e8f9dSMark Adams             const PetscInt    *ajtmp = aj_d + ai_d[rowa];
13268f7e8f9dSMark Adams             /* load in initial (unfactored row) */
13278f7e8f9dSMark Adams             for (int j=0;j<nza;j++) {
13288f7e8f9dSMark Adams               PetscInt    colb = ic[ajtmp[j]];
13298f7e8f9dSMark Adams               PetscScalar vala = av[j];
13308f7e8f9dSMark Adams               if (colb == rowb) {
13318f7e8f9dSMark Adams                 *(ba_d + bdiag_d[rowb]) = vala;
13328f7e8f9dSMark Adams               } else {
13338f7e8f9dSMark Adams                 const PetscInt    *pbj = bj_d + ((colb > rowb) ? bdiag_d[rowb+1]+1 : bi_d[rowb]);
13348f7e8f9dSMark Adams                 PetscScalar       *pba = ba_d + ((colb > rowb) ? bdiag_d[rowb+1]+1 : bi_d[rowb]);
13358f7e8f9dSMark Adams                 PetscInt          nz   = (colb > rowb) ? bdiag_d[rowb] - (bdiag_d[rowb+1]+1) : bi_d[rowb+1] - bi_d[rowb], set=0;
13368f7e8f9dSMark Adams                 for (int j=0; j<nz ; j++) {
13378f7e8f9dSMark Adams                   if (pbj[j] == colb) {
13388f7e8f9dSMark Adams                     pba[j] = vala;
13398f7e8f9dSMark Adams                     set++;
13408f7e8f9dSMark Adams                     break;
13418f7e8f9dSMark Adams                   }
13428f7e8f9dSMark Adams                 }
13438f1da0b2SJunchao Zhang                #if !defined(PETSC_HAVE_SYCL)
13448f7e8f9dSMark Adams                 if (set!=1) printf("\t\t\t ERROR DID NOT SET ?????\n");
13458f1da0b2SJunchao Zhang                #endif
13468f7e8f9dSMark Adams               }
13478f7e8f9dSMark Adams             }
13488f7e8f9dSMark Adams           });
13498f7e8f9dSMark Adams       });
13508f7e8f9dSMark Adams     Kokkos::fence();
1351930e68a5SMark Adams 
13528f7e8f9dSMark Adams     Kokkos::parallel_for(Kokkos::TeamPolicy<>(Nf*Ni, team_size, nVec).set_scratch_size(KOKKOS_SHARED_LEVEL, Kokkos::PerThread(sizet_scr_t::shmem_size()+scalar_scr_t::shmem_size()), Kokkos::PerTeam(sizet_scr_t::shmem_size())), KOKKOS_LAMBDA (const team_member team) {
13538f7e8f9dSMark Adams         sizet_scr_t     colkIdx(team.thread_scratch(KOKKOS_SHARED_LEVEL));
13548f7e8f9dSMark Adams         scalar_scr_t    L_ki(team.thread_scratch(KOKKOS_SHARED_LEVEL));
13558f7e8f9dSMark Adams         sizet_scr_t     flops(team.team_scratch(KOKKOS_SHARED_LEVEL));
1356042217e8SBarry Smith         const PetscInt  field = team.league_rank()/Ni, field_block_idx = team.league_rank()%Ni; // use grid.x/y in CUDA
13578f7e8f9dSMark Adams         const PetscInt  start = field*nloc, end = start + nloc;
13588f7e8f9dSMark Adams         Kokkos::single(Kokkos::PerTeam(team), [=]() { flops() = 0; });
13598f7e8f9dSMark Adams         // A22 panel update for each row A(1,:) and col A(:,1)
13608f7e8f9dSMark Adams         for (int ii=start; ii<end-1; ii++) {
13618f7e8f9dSMark Adams           const PetscInt    *bjUi = bj_d + bdiag_d[ii+1]+1, nzUi = bdiag_d[ii] - (bdiag_d[ii+1]+1); // vector, and vector size, of column indices of U(i,(i+1):end)
13628f7e8f9dSMark Adams           const PetscScalar *baUi = ba_d + bdiag_d[ii+1]+1; // vector of data  U(i,i+1:end)
13638f7e8f9dSMark Adams           const PetscInt    nUi_its = nzUi/Ni + !!(nzUi%Ni);
13648f7e8f9dSMark Adams           const PetscScalar Bii = *(ba_d + bdiag_d[ii]); // diagonal in its special place
13658f7e8f9dSMark Adams           Kokkos::parallel_for(Kokkos::TeamThreadRange(team, nUi_its), [=] (const int j) {
13668f7e8f9dSMark Adams               PetscInt kIdx = j*Ni + field_block_idx;
13678f7e8f9dSMark Adams               if (kIdx >= nzUi) /* void */ ;
13688f7e8f9dSMark Adams               else {
13698f7e8f9dSMark Adams                 const PetscInt myk  = bjUi[kIdx]; // assume symmetric structure, need a transposed meta-data here in general
13708f7e8f9dSMark Adams                 const PetscInt *pjL = bj_d + bi_d[myk]; // look for L(myk,ii) in start of row
13718f7e8f9dSMark Adams                 const PetscInt nzL  = bi_d[myk+1] - bi_d[myk]; // size of L_k(:)
13728f7e8f9dSMark Adams                 size_t         st_idx;
13738f7e8f9dSMark Adams                 // find and do L(k,i) = A(:k,i) / A(i,i)
13748f7e8f9dSMark Adams                 Kokkos::single(Kokkos::PerThread(team), [&]() { colkIdx() = PETSC_MAX_INT; });
13758f7e8f9dSMark Adams                 // get column, there has got to be a better way
13768f7e8f9dSMark Adams                 Kokkos::parallel_reduce(Kokkos::ThreadVectorRange(team,nzL), [&] (const int &j, size_t &idx) {
13778f7e8f9dSMark Adams                     if (pjL[j] == ii) {
13788f7e8f9dSMark Adams                       PetscScalar *pLki = ba_d + bi_d[myk] + j;
13798f7e8f9dSMark Adams                       idx = j; // output
13808f7e8f9dSMark Adams                       *pLki = *pLki/Bii; // column scaling:  L(k,i) = A(:k,i) / A(i,i)
13818f7e8f9dSMark Adams                     }
13828f7e8f9dSMark Adams                 }, st_idx);
13838f7e8f9dSMark Adams                 Kokkos::single(Kokkos::PerThread(team), [=]() { colkIdx() = st_idx; L_ki() = *(ba_d + bi_d[myk] + st_idx); });
13848f1da0b2SJunchao Zhang #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL)
138599551766SMark Adams                 if (colkIdx() == PETSC_MAX_INT) printf("\t\t\t\t\t\t\tERROR: failed to find L_ki(%d,%d)\n",(int)myk,ii); // uses a register
138699551766SMark Adams #endif
138799551766SMark Adams                 // active row k, do  A_kj -= Lki * U_ij; j \in U(i,:) j != i
13888f7e8f9dSMark Adams                 // U(i+1,:end)
13898f7e8f9dSMark Adams                 Kokkos::parallel_for(Kokkos::ThreadVectorRange(team,nzUi), [=] (const int &uiIdx) { // index into i (U)
13908f7e8f9dSMark Adams                       PetscScalar Uij = baUi[uiIdx];
13918f7e8f9dSMark Adams                       PetscInt    col = bjUi[uiIdx];
13928f7e8f9dSMark Adams                       if (col==myk) {
13938f7e8f9dSMark Adams                         // A_kk = A_kk - L_ki * U_ij(k)
13948f7e8f9dSMark Adams                         PetscScalar *Akkv = (ba_d + bdiag_d[myk]); // diagonal in its special place
13958f7e8f9dSMark Adams                         *Akkv = *Akkv - L_ki() * Uij; // UiK
13968f7e8f9dSMark Adams                       } else {
13978f7e8f9dSMark Adams                         PetscScalar    *start, *end, *pAkjv=NULL;
13988f7e8f9dSMark Adams                         PetscInt       high, low;
13998f7e8f9dSMark Adams                         const PetscInt *startj;
14008f7e8f9dSMark Adams                         if (col<myk) { // L
14018f7e8f9dSMark Adams                           PetscScalar *pLki = ba_d + bi_d[myk] + colkIdx();
14028f7e8f9dSMark Adams                           PetscInt idx = (pLki+1) - (ba_d + bi_d[myk]); // index into row
14038f7e8f9dSMark Adams                           start = pLki+1; // start at pLki+1, A22(myk,1)
14048f7e8f9dSMark Adams                           startj= bj_d + bi_d[myk] + idx;
14058f7e8f9dSMark Adams                           end   = ba_d + bi_d[myk+1];
14068f7e8f9dSMark Adams                         } else {
14078f7e8f9dSMark Adams                           PetscInt idx = bdiag_d[myk+1]+1;
14088f7e8f9dSMark Adams                           start = ba_d + idx;
14098f7e8f9dSMark Adams                           startj= bj_d + idx;
14108f7e8f9dSMark Adams                           end   = ba_d + bdiag_d[myk];
14118f7e8f9dSMark Adams                         }
14128f7e8f9dSMark Adams                         // search for 'col', use bisection search - TODO
14138f7e8f9dSMark Adams                         low  = 0;
14148f7e8f9dSMark Adams                         high = (PetscInt)(end-start);
14158f7e8f9dSMark Adams                         while (high-low > 5) {
14168f7e8f9dSMark Adams                           int t = (low+high)/2;
14178f7e8f9dSMark Adams                           if (startj[t] > col) high = t;
14188f7e8f9dSMark Adams                           else                 low  = t;
14198f7e8f9dSMark Adams                         }
14208f7e8f9dSMark Adams                         for (pAkjv=start+low; pAkjv<start+high; pAkjv++) {
14218f7e8f9dSMark Adams                           if (startj[pAkjv-start] == col) break;
14228f7e8f9dSMark Adams                         }
14238f1da0b2SJunchao Zhang #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL)
142499551766SMark Adams                         if (pAkjv==start+high) printf("\t\t\t\t\t\t\t\t\t\t\tERROR: *** failed to find Akj(%d,%d)\n",(int)myk,(int)col); // uses a register
142599551766SMark Adams #endif
14268f7e8f9dSMark Adams                         *pAkjv = *pAkjv - L_ki() * Uij; // A_kj = A_kj - L_ki * U_ij
14278f7e8f9dSMark Adams                       }
14288f7e8f9dSMark Adams                     });
14298f7e8f9dSMark Adams               }
14308f7e8f9dSMark Adams             });
14318f7e8f9dSMark Adams           team.team_barrier(); // this needs to be a league barrier to use more that one SM per block
14328f7e8f9dSMark Adams           if (field_block_idx==0) Kokkos::single(Kokkos::PerTeam(team), [&]() { Kokkos::atomic_add( flops.data(), (size_t)(2*(nzUi*nzUi)+2)); });
14338f7e8f9dSMark Adams         } /* endof for (i=0; i<n; i++) { */
14348f7e8f9dSMark Adams         Kokkos::single(Kokkos::PerTeam(team), [=]() { Kokkos::atomic_add( &d_flops_k(), flops()); flops() = 0; });
14358f7e8f9dSMark Adams       });
14368f7e8f9dSMark Adams     Kokkos::fence();
14378f7e8f9dSMark Adams     Kokkos::deep_copy (h_flops_k, d_flops_k);
14389566063dSJacob Faibussowitsch     PetscCall(PetscLogGpuFlops((PetscLogDouble)h_flops_k()));
14398f7e8f9dSMark Adams     Kokkos::parallel_for(Kokkos::TeamPolicy<>(Nf*Ni, 1, 256), KOKKOS_LAMBDA (const team_member team) {
14408f7e8f9dSMark Adams         const PetscInt  lg_rank = team.league_rank(), field = lg_rank/Ni; //, field_offset = lg_rank%Ni;
14418f7e8f9dSMark Adams         const PetscInt  start = field*nloc, end = start + nloc, n_its = (nloc/Ni + !!(nloc%Ni)); // 1/Ni iters
14428f7e8f9dSMark Adams         /* Invert diagonal for simpler triangular solves */
14438f7e8f9dSMark Adams         Kokkos::parallel_for(Kokkos::TeamVectorRange(team, n_its), [=] (int outer_index) {
14448f7e8f9dSMark Adams             int i = start + outer_index*Ni + lg_rank%Ni;
14458f7e8f9dSMark Adams             if (i < end) {
14468f7e8f9dSMark Adams               PetscScalar *pv = ba_d + bdiag_d[i];
14478f7e8f9dSMark Adams               *pv = 1.0/(*pv);
14488f7e8f9dSMark Adams             }
14498f7e8f9dSMark Adams           });
14508f7e8f9dSMark Adams       });
14518f7e8f9dSMark Adams   }
14529566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
14539566063dSJacob Faibussowitsch   PetscCall(ISRestoreIndices(isicol,&ic_h));
14549566063dSJacob Faibussowitsch   PetscCall(ISRestoreIndices(isrow,&r_h));
14558f7e8f9dSMark Adams 
14569566063dSJacob Faibussowitsch   PetscCall(ISIdentity(isrow,&row_identity));
14579566063dSJacob Faibussowitsch   PetscCall(ISIdentity(isicol,&col_identity));
14588f7e8f9dSMark Adams   if (b->inode.size) {
14598f7e8f9dSMark Adams     B->ops->solve = MatSolve_SeqAIJ_Inode;
14608f7e8f9dSMark Adams   } else if (row_identity && col_identity) {
14618f7e8f9dSMark Adams     B->ops->solve = MatSolve_SeqAIJ_NaturalOrdering;
14628f7e8f9dSMark Adams   } else {
14638f7e8f9dSMark Adams     B->ops->solve = MatSolve_SeqAIJ; // at least this needs to be in Kokkos
14648f7e8f9dSMark Adams   }
14658f7e8f9dSMark Adams   B->offloadmask = PETSC_OFFLOAD_GPU;
14669566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncHost(B)); // solve on CPU
14678f7e8f9dSMark Adams   B->ops->solveadd          = MatSolveAdd_SeqAIJ; // and this
14688f7e8f9dSMark Adams   B->ops->solvetranspose    = MatSolveTranspose_SeqAIJ;
14698f7e8f9dSMark Adams   B->ops->solvetransposeadd = MatSolveTransposeAdd_SeqAIJ;
14708f7e8f9dSMark Adams   B->ops->matsolve          = MatMatSolve_SeqAIJ;
14718f7e8f9dSMark Adams   B->assembled              = PETSC_TRUE;
14728f7e8f9dSMark Adams   B->preallocated           = PETSC_TRUE;
14738f7e8f9dSMark Adams 
1474930e68a5SMark Adams   PetscFunctionReturn(0);
1475930e68a5SMark Adams }
1476930e68a5SMark Adams 
147786a27549SJunchao Zhang static PetscErrorCode MatLUFactorSymbolic_SeqAIJKokkos(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info)
1478930e68a5SMark Adams {
1479930e68a5SMark Adams   PetscFunctionBegin;
14809566063dSJacob Faibussowitsch   PetscCall(MatLUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info));
148186a27549SJunchao Zhang   B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJKokkos;
148286a27549SJunchao Zhang   PetscFunctionReturn(0);
148386a27549SJunchao Zhang }
148486a27549SJunchao Zhang 
148586a27549SJunchao Zhang static PetscErrorCode MatSeqAIJKokkosSymbolicSolveCheck(Mat A)
148686a27549SJunchao Zhang {
148786a27549SJunchao Zhang   Mat_SeqAIJKokkosTriFactors     *factors = (Mat_SeqAIJKokkosTriFactors*)A->spptr;
148886a27549SJunchao Zhang 
148986a27549SJunchao Zhang   PetscFunctionBegin;
149086a27549SJunchao Zhang   if (!factors->sptrsv_symbolic_completed) {
149186a27549SJunchao Zhang     KokkosSparse::Experimental::sptrsv_symbolic(&factors->khU,factors->iU_d,factors->jU_d,factors->aU_d);
149286a27549SJunchao Zhang     KokkosSparse::Experimental::sptrsv_symbolic(&factors->khL,factors->iL_d,factors->jL_d,factors->aL_d);
149386a27549SJunchao Zhang     factors->sptrsv_symbolic_completed = PETSC_TRUE;
149486a27549SJunchao Zhang   }
149586a27549SJunchao Zhang   PetscFunctionReturn(0);
149686a27549SJunchao Zhang }
149786a27549SJunchao Zhang 
149886a27549SJunchao Zhang /* Check if we need to update factors etc for transpose solve */
149986a27549SJunchao Zhang static PetscErrorCode MatSeqAIJKokkosTransposeSolveCheck(Mat A)
150086a27549SJunchao Zhang {
150186a27549SJunchao Zhang   Mat_SeqAIJKokkosTriFactors     *factors = (Mat_SeqAIJKokkosTriFactors*)A->spptr;
1502076ba34aSJunchao Zhang   MatColIdxType             n = A->rmap->n;
150386a27549SJunchao Zhang 
150486a27549SJunchao Zhang   PetscFunctionBegin;
150586a27549SJunchao Zhang   if (!factors->transpose_updated) { /* TODO: KK needs to provide functions to do numeric transpose only */
150686a27549SJunchao Zhang     /* Update L^T and do sptrsv symbolic */
1507076ba34aSJunchao Zhang     factors->iLt_d = MatRowMapKokkosView("factors->iLt_d",n+1);
150886a27549SJunchao Zhang     Kokkos::deep_copy(factors->iLt_d,0); /* KK requires 0 */
1509076ba34aSJunchao Zhang     factors->jLt_d = MatColIdxKokkosView("factors->jLt_d",factors->jL_d.extent(0));
1510076ba34aSJunchao Zhang     factors->aLt_d = MatScalarKokkosView("factors->aLt_d",factors->aL_d.extent(0));
151186a27549SJunchao Zhang 
151286a27549SJunchao Zhang     KokkosKernels::Impl::transpose_matrix<
1513076ba34aSJunchao Zhang       ConstMatRowMapKokkosView,ConstMatColIdxKokkosView,ConstMatScalarKokkosView,
1514076ba34aSJunchao Zhang       MatRowMapKokkosView,MatColIdxKokkosView,MatScalarKokkosView,
1515076ba34aSJunchao Zhang       MatRowMapKokkosView,DefaultExecutionSpace>(
151686a27549SJunchao Zhang         n,n,factors->iL_d,factors->jL_d,factors->aL_d,
151786a27549SJunchao Zhang         factors->iLt_d,factors->jLt_d,factors->aLt_d);
151886a27549SJunchao Zhang 
151986a27549SJunchao Zhang     /* TODO: KK transpose_matrix() does not sort column indices, however cusparse requires sorted indices.
152086a27549SJunchao Zhang       We have to sort the indices, until KK provides finer control options.
152186a27549SJunchao Zhang     */
1522076ba34aSJunchao Zhang     KokkosKernels::sort_crs_matrix<DefaultExecutionSpace,
1523076ba34aSJunchao Zhang       MatRowMapKokkosView,MatColIdxKokkosView,MatScalarKokkosView>(
152486a27549SJunchao Zhang         factors->iLt_d,factors->jLt_d,factors->aLt_d);
152586a27549SJunchao Zhang 
152686a27549SJunchao Zhang     KokkosSparse::Experimental::sptrsv_symbolic(&factors->khLt,factors->iLt_d,factors->jLt_d,factors->aLt_d);
152786a27549SJunchao Zhang 
152886a27549SJunchao Zhang     /* Update U^T and do sptrsv symbolic */
1529076ba34aSJunchao Zhang     factors->iUt_d = MatRowMapKokkosView("factors->iUt_d",n+1);
153086a27549SJunchao Zhang     Kokkos::deep_copy(factors->iUt_d,0); /* KK requires 0 */
1531076ba34aSJunchao Zhang     factors->jUt_d = MatColIdxKokkosView("factors->jUt_d",factors->jU_d.extent(0));
1532076ba34aSJunchao Zhang     factors->aUt_d = MatScalarKokkosView("factors->aUt_d",factors->aU_d.extent(0));
153386a27549SJunchao Zhang 
153486a27549SJunchao Zhang     KokkosKernels::Impl::transpose_matrix<
1535076ba34aSJunchao Zhang       ConstMatRowMapKokkosView,ConstMatColIdxKokkosView,ConstMatScalarKokkosView,
1536076ba34aSJunchao Zhang       MatRowMapKokkosView,MatColIdxKokkosView,MatScalarKokkosView,
1537076ba34aSJunchao Zhang       MatRowMapKokkosView,DefaultExecutionSpace>(
153886a27549SJunchao Zhang         n,n,factors->iU_d, factors->jU_d, factors->aU_d,
153986a27549SJunchao Zhang         factors->iUt_d,factors->jUt_d,factors->aUt_d);
154086a27549SJunchao Zhang 
154186a27549SJunchao Zhang     /* Sort indices. See comments above */
1542076ba34aSJunchao Zhang     KokkosKernels::sort_crs_matrix<DefaultExecutionSpace,
1543076ba34aSJunchao Zhang       MatRowMapKokkosView,MatColIdxKokkosView,MatScalarKokkosView>(
154486a27549SJunchao Zhang         factors->iUt_d,factors->jUt_d,factors->aUt_d);
154586a27549SJunchao Zhang 
154686a27549SJunchao Zhang     KokkosSparse::Experimental::sptrsv_symbolic(&factors->khUt,factors->iUt_d,factors->jUt_d,factors->aUt_d);
154786a27549SJunchao Zhang     factors->transpose_updated = PETSC_TRUE;
154886a27549SJunchao Zhang   }
154986a27549SJunchao Zhang   PetscFunctionReturn(0);
155086a27549SJunchao Zhang }
155186a27549SJunchao Zhang 
155286a27549SJunchao Zhang /* Solve Ax = b, with A = LU */
155386a27549SJunchao Zhang static PetscErrorCode MatSolve_SeqAIJKokkos(Mat A,Vec b,Vec x)
155486a27549SJunchao Zhang {
155586a27549SJunchao Zhang   ConstPetscScalarKokkosView     bv;
155686a27549SJunchao Zhang   PetscScalarKokkosView          xv;
155786a27549SJunchao Zhang   Mat_SeqAIJKokkosTriFactors     *factors = (Mat_SeqAIJKokkosTriFactors*)A->spptr;
155886a27549SJunchao Zhang 
155986a27549SJunchao Zhang   PetscFunctionBegin;
15609566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
15619566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSymbolicSolveCheck(A));
15629566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(b,&bv));
15639566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosViewWrite(x,&xv));
156486a27549SJunchao Zhang   /* Solve L tmpv = b */
15659566063dSJacob Faibussowitsch   PetscCallCXX(KokkosSparse::Experimental::sptrsv_solve(&factors->khL,factors->iL_d,factors->jL_d,factors->aL_d,bv,factors->workVector));
156686a27549SJunchao Zhang   /* Solve Ux = tmpv */
15679566063dSJacob Faibussowitsch   PetscCallCXX(KokkosSparse::Experimental::sptrsv_solve(&factors->khU,factors->iU_d,factors->jU_d,factors->aU_d,factors->workVector,xv));
15689566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(b,&bv));
15699566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosViewWrite(x,&xv));
15709566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
157186a27549SJunchao Zhang   PetscFunctionReturn(0);
157286a27549SJunchao Zhang }
157386a27549SJunchao Zhang 
1574076ba34aSJunchao Zhang /* Solve A^T x = b, where A^T = U^T L^T */
157586a27549SJunchao Zhang static PetscErrorCode MatSolveTranspose_SeqAIJKokkos(Mat A,Vec b,Vec x)
157686a27549SJunchao Zhang {
157786a27549SJunchao Zhang   ConstPetscScalarKokkosView     bv;
157886a27549SJunchao Zhang   PetscScalarKokkosView          xv;
157986a27549SJunchao Zhang   Mat_SeqAIJKokkosTriFactors     *factors = (Mat_SeqAIJKokkosTriFactors*)A->spptr;
158086a27549SJunchao Zhang 
158186a27549SJunchao Zhang   PetscFunctionBegin;
15829566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
15839566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosTransposeSolveCheck(A));
15849566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosView(b,&bv));
15859566063dSJacob Faibussowitsch   PetscCall(VecGetKokkosViewWrite(x,&xv));
158686a27549SJunchao Zhang   /* Solve U^T tmpv = b */
158786a27549SJunchao Zhang   KokkosSparse::Experimental::sptrsv_solve(&factors->khUt,factors->iUt_d,factors->jUt_d,factors->aUt_d,bv,factors->workVector);
158886a27549SJunchao Zhang 
158986a27549SJunchao Zhang   /* Solve L^T x = tmpv */
159086a27549SJunchao Zhang   KokkosSparse::Experimental::sptrsv_solve(&factors->khLt,factors->iLt_d,factors->jLt_d,factors->aLt_d,factors->workVector,xv);
15919566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosView(b,&bv));
15929566063dSJacob Faibussowitsch   PetscCall(VecRestoreKokkosViewWrite(x,&xv));
15939566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
159486a27549SJunchao Zhang   PetscFunctionReturn(0);
159586a27549SJunchao Zhang }
159686a27549SJunchao Zhang 
159786a27549SJunchao Zhang static PetscErrorCode MatILUFactorNumeric_SeqAIJKokkos(Mat B,Mat A,const MatFactorInfo *info)
159886a27549SJunchao Zhang {
159986a27549SJunchao Zhang   Mat_SeqAIJKokkos               *aijkok = (Mat_SeqAIJKokkos*)A->spptr;
160086a27549SJunchao Zhang   Mat_SeqAIJKokkosTriFactors     *factors = (Mat_SeqAIJKokkosTriFactors*)B->spptr;
160186a27549SJunchao Zhang   PetscInt                       fill_lev = info->levels;
160286a27549SJunchao Zhang 
160386a27549SJunchao Zhang   PetscFunctionBegin;
16049566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeBegin());
16059566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
1606076ba34aSJunchao Zhang 
1607076ba34aSJunchao Zhang   auto a_d = aijkok->a_dual.view_device();
1608076ba34aSJunchao Zhang   auto i_d = aijkok->i_dual.view_device();
1609076ba34aSJunchao Zhang   auto j_d = aijkok->j_dual.view_device();
1610076ba34aSJunchao Zhang 
1611076ba34aSJunchao Zhang   KokkosSparse::Experimental::spiluk_numeric(&factors->kh,fill_lev,i_d,j_d,a_d,factors->iL_d,factors->jL_d,factors->aL_d,factors->iU_d,factors->jU_d,factors->aU_d);
161286a27549SJunchao Zhang 
161386a27549SJunchao Zhang   B->assembled                       = PETSC_TRUE;
161486a27549SJunchao Zhang   B->preallocated                    = PETSC_TRUE;
161586a27549SJunchao Zhang   B->ops->solve                      = MatSolve_SeqAIJKokkos;
161686a27549SJunchao Zhang   B->ops->solvetranspose             = MatSolveTranspose_SeqAIJKokkos;
161786a27549SJunchao Zhang   B->ops->matsolve                   = NULL;
161886a27549SJunchao Zhang   B->ops->matsolvetranspose          = NULL;
161986a27549SJunchao Zhang   B->offloadmask                     = PETSC_OFFLOAD_GPU;
162086a27549SJunchao Zhang 
162186a27549SJunchao Zhang   /* Once the factors' value changed, we need to update their transpose and sptrsv handle */
162286a27549SJunchao Zhang   factors->transpose_updated         = PETSC_FALSE;
162386a27549SJunchao Zhang   factors->sptrsv_symbolic_completed = PETSC_FALSE;
1624eeadb341SJunchao Zhang   /* TODO: log flops, but how to know that? */
16259566063dSJacob Faibussowitsch   PetscCall(PetscLogGpuTimeEnd());
162686a27549SJunchao Zhang   PetscFunctionReturn(0);
162786a27549SJunchao Zhang }
162886a27549SJunchao Zhang 
162986a27549SJunchao Zhang static PetscErrorCode MatILUFactorSymbolic_SeqAIJKokkos(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info)
163086a27549SJunchao Zhang {
163186a27549SJunchao Zhang   Mat_SeqAIJKokkos               *aijkok;
163286a27549SJunchao Zhang   Mat_SeqAIJ                     *b;
163386a27549SJunchao Zhang   Mat_SeqAIJKokkosTriFactors     *factors = (Mat_SeqAIJKokkosTriFactors*)B->spptr;
163486a27549SJunchao Zhang   PetscInt                       fill_lev = info->levels;
163586a27549SJunchao Zhang   PetscInt                       nnzA = ((Mat_SeqAIJ*)A->data)->nz,nnzL,nnzU;
163686a27549SJunchao Zhang   PetscInt                       n = A->rmap->n;
163786a27549SJunchao Zhang 
163886a27549SJunchao Zhang   PetscFunctionBegin;
16399566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A));
164086a27549SJunchao Zhang   /* Rebuild factors */
164186a27549SJunchao Zhang   if (factors) {factors->Destroy();} /* Destroy the old if it exists */
164286a27549SJunchao Zhang   else {B->spptr = factors = new Mat_SeqAIJKokkosTriFactors(n);}
164386a27549SJunchao Zhang 
164486a27549SJunchao Zhang   /* Create a spiluk handle and then do symbolic factorization */
164586a27549SJunchao Zhang   nnzL = nnzU = PetscRealIntMultTruncate(info->fill,nnzA);
164686a27549SJunchao Zhang   factors->kh.create_spiluk_handle(KokkosSparse::Experimental::SPILUKAlgorithm::SEQLVLSCHD_TP1,n,nnzL,nnzU);
164786a27549SJunchao Zhang 
164886a27549SJunchao Zhang   auto spiluk_handle = factors->kh.get_spiluk_handle();
164986a27549SJunchao Zhang 
165086a27549SJunchao Zhang   Kokkos::realloc(factors->iL_d,n+1); /* Free old arrays and realloc */
165186a27549SJunchao Zhang   Kokkos::realloc(factors->jL_d,spiluk_handle->get_nnzL());
165286a27549SJunchao Zhang   Kokkos::realloc(factors->iU_d,n+1);
165386a27549SJunchao Zhang   Kokkos::realloc(factors->jU_d,spiluk_handle->get_nnzU());
165486a27549SJunchao Zhang 
165586a27549SJunchao Zhang   aijkok = (Mat_SeqAIJKokkos*)A->spptr;
1656076ba34aSJunchao Zhang   auto i_d = aijkok->i_dual.view_device();
1657076ba34aSJunchao Zhang   auto j_d = aijkok->j_dual.view_device();
1658076ba34aSJunchao Zhang   KokkosSparse::Experimental::spiluk_symbolic(&factors->kh,fill_lev,i_d,j_d,factors->iL_d,factors->jL_d,factors->iU_d,factors->jU_d);
165986a27549SJunchao Zhang   /* TODO: if spiluk_symbolic is asynchronous, do we need to sync before calling get_nnzL()? */
166086a27549SJunchao Zhang 
166186a27549SJunchao Zhang   Kokkos::resize (factors->jL_d,spiluk_handle->get_nnzL()); /* Shrink or expand, and retain old value */
166286a27549SJunchao Zhang   Kokkos::resize (factors->jU_d,spiluk_handle->get_nnzU());
166386a27549SJunchao Zhang   Kokkos::realloc(factors->aL_d,spiluk_handle->get_nnzL()); /* No need to retain old value */
166486a27549SJunchao Zhang   Kokkos::realloc(factors->aU_d,spiluk_handle->get_nnzU());
166586a27549SJunchao Zhang 
166686a27549SJunchao Zhang   /* TODO: add options to select sptrsv algorithms */
166786a27549SJunchao Zhang   /* Create sptrsv handles for L, U and their transpose */
166886a27549SJunchao Zhang  #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE)
166986a27549SJunchao Zhang   auto sptrsv_alg = KokkosSparse::Experimental::SPTRSVAlgorithm::SPTRSV_CUSPARSE;
167086a27549SJunchao Zhang  #else
167186a27549SJunchao Zhang   auto sptrsv_alg = KokkosSparse::Experimental::SPTRSVAlgorithm::SEQLVLSCHD_TP1;
167286a27549SJunchao Zhang  #endif
167386a27549SJunchao Zhang 
167486a27549SJunchao Zhang   factors->khL.create_sptrsv_handle(sptrsv_alg,n,true/* L is lower tri */);
167586a27549SJunchao Zhang   factors->khU.create_sptrsv_handle(sptrsv_alg,n,false/* U is not lower tri */);
167686a27549SJunchao Zhang   factors->khLt.create_sptrsv_handle(sptrsv_alg,n,false/* L^T is not lower tri */);
167786a27549SJunchao Zhang   factors->khUt.create_sptrsv_handle(sptrsv_alg,n,true/* U^T is lower tri */);
167886a27549SJunchao Zhang 
167986a27549SJunchao Zhang   /* Fill fields of the factor matrix B */
16809566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(B,MAT_SKIP_ALLOCATION,NULL));
168186a27549SJunchao Zhang   b     = (Mat_SeqAIJ*)B->data;
168286a27549SJunchao Zhang   b->nz = b->maxnz = spiluk_handle->get_nnzL()+spiluk_handle->get_nnzU();
168386a27549SJunchao Zhang   B->info.fill_ratio_given  = info->fill;
168486a27549SJunchao Zhang   B->info.fill_ratio_needed = ((PetscReal)b->nz)/((PetscReal)nnzA);
168586a27549SJunchao Zhang 
168686a27549SJunchao Zhang   B->offloadmask            = PETSC_OFFLOAD_GPU;
168786a27549SJunchao Zhang   B->ops->lufactornumeric   = MatILUFactorNumeric_SeqAIJKokkos;
1688930e68a5SMark Adams   PetscFunctionReturn(0);
1689930e68a5SMark Adams }
1690930e68a5SMark Adams 
16918f7e8f9dSMark Adams static PetscErrorCode MatLUFactorSymbolic_SeqAIJKOKKOSDEVICE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info)
16928f7e8f9dSMark Adams {
16938f7e8f9dSMark Adams   Mat_SeqAIJ       *b=(Mat_SeqAIJ*)B->data;
16948f7e8f9dSMark Adams   const PetscInt   nrows   = A->rmap->n;
1695930e68a5SMark Adams 
16968f7e8f9dSMark Adams   PetscFunctionBegin;
16979566063dSJacob Faibussowitsch   PetscCall(MatLUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info));
16988f7e8f9dSMark Adams   B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJKOKKOSDEVICE;
16998f7e8f9dSMark Adams   // move B data into Kokkos
17009566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(B)); // create aijkok
17019566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJKokkosSyncDevice(A)); // create aijkok
17028f7e8f9dSMark Adams   {
17038f7e8f9dSMark Adams     Mat_SeqAIJKokkos *baijkok = static_cast<Mat_SeqAIJKokkos*>(B->spptr);
1704300d22a6SJunchao Zhang     if (!baijkok->diag_d.extent(0)) {
17058f7e8f9dSMark Adams       const Kokkos::View<PetscInt*, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_diag (b->diag,nrows+1);
1706300d22a6SJunchao Zhang       baijkok->diag_d = Kokkos::View<PetscInt*>(Kokkos::create_mirror(DefaultMemorySpace(),h_diag));
1707300d22a6SJunchao Zhang       Kokkos::deep_copy (baijkok->diag_d, h_diag);
17088f7e8f9dSMark Adams     }
17098f7e8f9dSMark Adams   }
17108f7e8f9dSMark Adams   PetscFunctionReturn(0);
17118f7e8f9dSMark Adams }
17128f7e8f9dSMark Adams 
171386a27549SJunchao Zhang static PetscErrorCode MatFactorGetSolverType_SeqAIJKokkos(Mat A,MatSolverType *type)
1714930e68a5SMark Adams {
1715930e68a5SMark Adams   PetscFunctionBegin;
1716930e68a5SMark Adams   *type = MATSOLVERKOKKOS;
1717930e68a5SMark Adams   PetscFunctionReturn(0);
1718930e68a5SMark Adams }
1719930e68a5SMark Adams 
17208f7e8f9dSMark Adams static PetscErrorCode MatFactorGetSolverType_seqaij_kokkos_device(Mat A,MatSolverType *type)
17218f7e8f9dSMark Adams {
17228f7e8f9dSMark Adams   PetscFunctionBegin;
17238f7e8f9dSMark Adams   *type = MATSOLVERKOKKOSDEVICE;
17248f7e8f9dSMark Adams   PetscFunctionReturn(0);
17258f7e8f9dSMark Adams }
17268f7e8f9dSMark Adams 
1727930e68a5SMark Adams /*MC
172886a27549SJunchao Zhang   MATSOLVERKOKKOS = "Kokkos" - A matrix solver type providing triangular solvers for sequential matrices
172986a27549SJunchao Zhang   on a single GPU of type, SeqAIJKokkos, AIJKokkos.
1730930e68a5SMark Adams 
1731930e68a5SMark Adams   Level: beginner
1732930e68a5SMark Adams 
1733db781477SPatrick Sanan .seealso: `PCFactorSetMatSolverType()`, `MatSolverType`, `MatCreateSeqAIJKokkos()`, `MATAIJKOKKOS`, `MatKokkosSetFormat()`, `MatKokkosStorageFormat`, `MatKokkosFormatOperation`
1734930e68a5SMark Adams M*/
173586a27549SJunchao Zhang PETSC_EXTERN PetscErrorCode MatGetFactor_SeqAIJKokkos_Kokkos(Mat A,MatFactorType ftype,Mat *B) /* MatGetFactor_<MatType>_<MatSolverType> */
1736930e68a5SMark Adams {
1737930e68a5SMark Adams   PetscInt       n = A->rmap->n;
1738930e68a5SMark Adams 
1739930e68a5SMark Adams   PetscFunctionBegin;
17409566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A),B));
17419566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*B,n,n,n,n));
1742930e68a5SMark Adams   (*B)->factortype = ftype;
17439566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_LU]));
17449566063dSJacob Faibussowitsch   PetscCall(MatSetType(*B,MATSEQAIJKOKKOS));
1745930e68a5SMark Adams 
17468f7e8f9dSMark Adams   if (ftype == MAT_FACTOR_LU) {
17479566063dSJacob Faibussowitsch     PetscCall(MatSetBlockSizesFromMats(*B,A,A));
174886a27549SJunchao Zhang     (*B)->canuseordering         = PETSC_TRUE;
174986a27549SJunchao Zhang     (*B)->ops->lufactorsymbolic  = MatLUFactorSymbolic_SeqAIJKokkos;
175086a27549SJunchao Zhang   } else if (ftype == MAT_FACTOR_ILU) {
17519566063dSJacob Faibussowitsch     PetscCall(MatSetBlockSizesFromMats(*B,A,A));
175286a27549SJunchao Zhang     (*B)->canuseordering         = PETSC_FALSE;
175386a27549SJunchao Zhang     (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJKokkos;
175498921bdaSJacob Faibussowitsch   } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MatFactorType %s is not supported by MatType SeqAIJKokkos", MatFactorTypes[ftype]);
1755930e68a5SMark Adams 
17569566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJSetPreallocation(*B,MAT_SKIP_ALLOCATION,NULL));
17579566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)(*B),"MatFactorGetSolverType_C",MatFactorGetSolverType_SeqAIJKokkos));
1758930e68a5SMark Adams   PetscFunctionReturn(0);
1759930e68a5SMark Adams }
17608f7e8f9dSMark Adams 
17618f7e8f9dSMark Adams PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijkokkos_kokkos_device(Mat A,MatFactorType ftype,Mat *B)
17628f7e8f9dSMark Adams {
17638f7e8f9dSMark Adams   PetscInt       n = A->rmap->n;
17648f7e8f9dSMark Adams 
17658f7e8f9dSMark Adams   PetscFunctionBegin;
17669566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A),B));
17679566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*B,n,n,n,n));
17688f7e8f9dSMark Adams   (*B)->factortype = ftype;
1769f73b0415SBarry Smith   (*B)->canuseordering = PETSC_TRUE;
17709566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_LU]));
17719566063dSJacob Faibussowitsch   PetscCall(MatSetType(*B,MATSEQAIJKOKKOS));
17728f7e8f9dSMark Adams 
17738f7e8f9dSMark Adams   if (ftype == MAT_FACTOR_LU) {
17749566063dSJacob Faibussowitsch     PetscCall(MatSetBlockSizesFromMats(*B,A,A));
17758f7e8f9dSMark Adams     (*B)->ops->lufactorsymbolic  = MatLUFactorSymbolic_SeqAIJKOKKOSDEVICE;
17768f7e8f9dSMark Adams   } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Factor type not supported for KOKKOS Matrix Types");
17778f7e8f9dSMark Adams 
17789566063dSJacob Faibussowitsch   PetscCall(MatSeqAIJSetPreallocation(*B,MAT_SKIP_ALLOCATION,NULL));
17799566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)(*B),"MatFactorGetSolverType_C",MatFactorGetSolverType_seqaij_kokkos_device));
17808f7e8f9dSMark Adams   PetscFunctionReturn(0);
17818f7e8f9dSMark Adams }
178286a27549SJunchao Zhang 
178386a27549SJunchao Zhang PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_KOKKOS(void)
178486a27549SJunchao Zhang {
178586a27549SJunchao Zhang   PetscFunctionBegin;
17869566063dSJacob Faibussowitsch   PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS,MATSEQAIJKOKKOS,MAT_FACTOR_LU,MatGetFactor_SeqAIJKokkos_Kokkos));
17879566063dSJacob Faibussowitsch   PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS,MATSEQAIJKOKKOS,MAT_FACTOR_ILU,MatGetFactor_SeqAIJKokkos_Kokkos));
17889566063dSJacob Faibussowitsch   PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOSDEVICE,MATSEQAIJKOKKOS,MAT_FACTOR_LU,MatGetFactor_seqaijkokkos_kokkos_device));
178986a27549SJunchao Zhang   PetscFunctionReturn(0);
179086a27549SJunchao Zhang }
179186a27549SJunchao Zhang 
1792076ba34aSJunchao Zhang /* Utility to print out a KokkosCsrMatrix for debugging */
1793076ba34aSJunchao Zhang PETSC_INTERN PetscErrorCode PrintCsrMatrix(const KokkosCsrMatrix& csrmat)
1794076ba34aSJunchao Zhang {
1795076ba34aSJunchao Zhang   const auto&       iv = Kokkos::create_mirror_view_and_copy(Kokkos::HostSpace(),csrmat.graph.row_map);
1796076ba34aSJunchao Zhang   const auto&       jv = Kokkos::create_mirror_view_and_copy(Kokkos::HostSpace(),csrmat.graph.entries);
1797076ba34aSJunchao Zhang   const auto&       av = Kokkos::create_mirror_view_and_copy(Kokkos::HostSpace(),csrmat.values);
1798076ba34aSJunchao Zhang   const PetscInt    *i = iv.data();
1799076ba34aSJunchao Zhang   const PetscInt    *j = jv.data();
1800076ba34aSJunchao Zhang   const PetscScalar *a = av.data();
1801076ba34aSJunchao Zhang   PetscInt          m = csrmat.numRows(),n = csrmat.numCols(),nnz = csrmat.nnz();
1802076ba34aSJunchao Zhang 
1803076ba34aSJunchao Zhang   PetscFunctionBegin;
18049566063dSJacob Faibussowitsch   PetscCall(PetscPrintf(PETSC_COMM_SELF,"%" PetscInt_FMT " x %" PetscInt_FMT " SeqAIJKokkos, with %" PetscInt_FMT " nonzeros\n",m,n,nnz));
1805076ba34aSJunchao Zhang   for (PetscInt k=0; k<m; k++) {
18069566063dSJacob Faibussowitsch     PetscCall(PetscPrintf(PETSC_COMM_SELF,"%" PetscInt_FMT ": ",k));
1807076ba34aSJunchao Zhang     for (PetscInt p=i[k]; p<i[k+1]; p++) {
180863a3b9bcSJacob Faibussowitsch       PetscCall(PetscPrintf(PETSC_COMM_SELF,"%" PetscInt_FMT "(%.1f), ",j[p],(double)PetscRealPart(a[p])));
1809076ba34aSJunchao Zhang     }
18109566063dSJacob Faibussowitsch     PetscCall(PetscPrintf(PETSC_COMM_SELF,"\n"));
1811076ba34aSJunchao Zhang   }
1812076ba34aSJunchao Zhang   PetscFunctionReturn(0);
1813076ba34aSJunchao Zhang }
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