1e36ced11SJunchao Zhang #include <petsc_kokkos.hpp> 211d22bbfSJunchao Zhang #include <petscvec_kokkos.hpp> 3c0c276a7Ssdargavi #include <petscmat_kokkos.hpp> 4076ba34aSJunchao Zhang #include <petscpkg_version.h> 5152b3e56SJunchao Zhang #include <petsc/private/petscimpl.h> 642550becSJunchao Zhang #include <petsc/private/sfimpl.h> 7aac854edSJunchao Zhang #include <petsc/private/kokkosimpl.hpp> 8*7233ce55SJed Brown #include <petscsys.h> 98c3ff71bSJunchao Zhang 108c3ff71bSJunchao Zhang #include <Kokkos_Core.hpp> 11f0cf5187SStefano Zampini #include <KokkosBlas.hpp> 128c3ff71bSJunchao Zhang #include <KokkosSparse_CrsMatrix.hpp> 13cc6e31f1SJunchao Zhang 14cc6e31f1SJunchao Zhang // To suppress compiler warnings: 15cc6e31f1SJunchao Zhang // /path/include/KokkosSparse_spmv_bsrmatrix_tpl_spec_decl.hpp:434:63: 16cc6e31f1SJunchao Zhang // warning: 'cusparseStatus_t cusparseDbsrmm(cusparseHandle_t, cusparseDirection_t, cusparseOperation_t, 17cc6e31f1SJunchao Zhang // cusparseOperation_t, int, int, int, int, const double*, cusparseMatDescr_t, const double*, const int*, const int*, 18cc6e31f1SJunchao Zhang // int, const double*, int, const double*, double*, int)' is deprecated: please use cusparseSpMM instead [-Wdeprecated-declarations] 19cc6e31f1SJunchao Zhang PETSC_PRAGMA_DIAGNOSTIC_IGNORED_BEGIN("-Wdeprecated-declarations") 208c3ff71bSJunchao Zhang #include <KokkosSparse_spmv.hpp> 21cc6e31f1SJunchao Zhang PETSC_PRAGMA_DIAGNOSTIC_IGNORED_END() 22cc6e31f1SJunchao Zhang 2386a27549SJunchao Zhang #include <KokkosSparse_spiluk.hpp> 2486a27549SJunchao Zhang #include <KokkosSparse_sptrsv.hpp> 25076ba34aSJunchao Zhang #include <KokkosSparse_spgemm.hpp> 26076ba34aSJunchao Zhang #include <KokkosSparse_spadd.hpp> 279d13fa56SJunchao Zhang #include <KokkosBatched_LU_Decl.hpp> 289d13fa56SJunchao Zhang #include <KokkosBatched_InverseLU_Decl.hpp> 2986a27549SJunchao Zhang 3042550becSJunchao Zhang #include <../src/mat/impls/aij/seq/kokkos/aijkok.hpp> 318c3ff71bSJunchao Zhang 320e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_GE(3, 7, 0) 33f98996d3SJunchao Zhang #include <KokkosSparse_Utils.hpp> 34f98996d3SJunchao Zhang using KokkosSparse::sort_crs_matrix; 359371c9d4SSatish Balay using KokkosSparse::Impl::transpose_matrix; 36f98996d3SJunchao Zhang #else 37f98996d3SJunchao Zhang #include <KokkosKernels_Sorting.hpp> 38f98996d3SJunchao Zhang using KokkosKernels::sort_crs_matrix; 399371c9d4SSatish Balay using KokkosKernels::Impl::transpose_matrix; 40f98996d3SJunchao Zhang #endif 41f98996d3SJunchao Zhang 42aac854edSJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_GE(4, 6, 0) 43aac854edSJunchao Zhang using KokkosSparse::spiluk_symbolic; 44aac854edSJunchao Zhang using KokkosSparse::spiluk_numeric; 45aac854edSJunchao Zhang using KokkosSparse::sptrsv_symbolic; 46aac854edSJunchao Zhang using KokkosSparse::sptrsv_solve; 47aac854edSJunchao Zhang using KokkosSparse::Experimental::SPTRSVAlgorithm; 48aac854edSJunchao Zhang using KokkosSparse::Experimental::SPILUKAlgorithm; 49aac854edSJunchao Zhang #else 50aac854edSJunchao Zhang using KokkosSparse::Experimental::spiluk_symbolic; 51aac854edSJunchao Zhang using KokkosSparse::Experimental::spiluk_numeric; 52aac854edSJunchao Zhang using KokkosSparse::Experimental::sptrsv_symbolic; 53aac854edSJunchao Zhang using KokkosSparse::Experimental::sptrsv_solve; 54aac854edSJunchao Zhang using KokkosSparse::Experimental::SPTRSVAlgorithm; 55aac854edSJunchao Zhang using KokkosSparse::Experimental::SPILUKAlgorithm; 56aac854edSJunchao Zhang #endif 57aac854edSJunchao Zhang 588c3ff71bSJunchao Zhang static PetscErrorCode MatSetOps_SeqAIJKokkos(Mat); /* Forward declaration */ 598c3ff71bSJunchao Zhang 60076ba34aSJunchao Zhang /* MatAssemblyEnd_SeqAIJKokkos() happens when we finalized nonzeros of the matrix, either after 61076ba34aSJunchao Zhang we assembled the matrix on host, or after we directly produced the matrix data on device (ex., through MatMatMult). 62076ba34aSJunchao Zhang In the latter case, it is important to set a_dual's sync state correctly. 63076ba34aSJunchao Zhang */ 64d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatAssemblyEnd_SeqAIJKokkos(Mat A, MatAssemblyType mode) 65d71ae5a4SJacob Faibussowitsch { 66076ba34aSJunchao Zhang Mat_SeqAIJ *aijseq; 67076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 688c3ff71bSJunchao Zhang 698c3ff71bSJunchao Zhang PetscFunctionBegin; 703ba16761SJacob Faibussowitsch if (mode == MAT_FLUSH_ASSEMBLY) PetscFunctionReturn(PETSC_SUCCESS); 719566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd_SeqAIJ(A, mode)); 72076ba34aSJunchao Zhang 73076ba34aSJunchao Zhang aijseq = static_cast<Mat_SeqAIJ *>(A->data); 74076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 75076ba34aSJunchao Zhang 76076ba34aSJunchao Zhang /* If aijkok does not exist, we just copy i, j to device. 77076ba34aSJunchao Zhang If aijkok already exists, but the device's nonzero pattern does not match with the host's, we assume the latest data is on host. 78076ba34aSJunchao Zhang In both cases, we build a new aijkok structure. 79076ba34aSJunchao Zhang */ 80076ba34aSJunchao Zhang if (!aijkok || aijkok->nonzerostate != A->nonzerostate) { /* aijkok might not exist yet or nonzero pattern has changed */ 81076ba34aSJunchao Zhang delete aijkok; 82f4747e26SJunchao Zhang aijkok = new Mat_SeqAIJKokkos(A->rmap->n, A->cmap->n, aijseq, A->nonzerostate, PETSC_FALSE /*don't copy mat values to device*/); 83076ba34aSJunchao Zhang A->spptr = aijkok; 84f4747e26SJunchao Zhang } else if (A->rmap->n && aijkok->diag_dual.extent(0) == 0) { // MatProduct might directly produce AIJ on device, but not the diag. 85f4747e26SJunchao Zhang MatRowMapKokkosViewHost diag_h(aijseq->diag, A->rmap->n); 86f4747e26SJunchao Zhang auto diag_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), diag_h); 87f4747e26SJunchao Zhang aijkok->diag_dual = MatRowMapKokkosDualView(diag_d, diag_h); 88076ba34aSJunchao Zhang } 893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 908c3ff71bSJunchao Zhang } 918c3ff71bSJunchao Zhang 9286a27549SJunchao Zhang /* Sync CSR data to device if not yet */ 93d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatSeqAIJKokkosSyncDevice(Mat A) 94d71ae5a4SJacob Faibussowitsch { 958c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 968c3ff71bSJunchao Zhang 978c3ff71bSJunchao Zhang PetscFunctionBegin; 98aaa8cc7dSPierre Jolivet PetscCheck(A->factortype == MAT_FACTOR_NONE, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Can't sync factorized matrix from host to device"); 995f80ce2aSJacob Faibussowitsch PetscCheck(aijkok, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr"); 100076ba34aSJunchao Zhang if (aijkok->a_dual.need_sync_device()) { 101076ba34aSJunchao Zhang aijkok->a_dual.sync_device(); 102580c7c76SPierre Jolivet aijkok->transpose_updated = PETSC_FALSE; /* values of the transpose is out-of-date */ 10386a27549SJunchao Zhang aijkok->hermitian_updated = PETSC_FALSE; 1048c3ff71bSJunchao Zhang } 1053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1068c3ff71bSJunchao Zhang } 1078c3ff71bSJunchao Zhang 108076ba34aSJunchao Zhang /* Mark the CSR data on device as modified */ 109d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatSeqAIJKokkosModifyDevice(Mat A) 110d71ae5a4SJacob Faibussowitsch { 11186a27549SJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 11286a27549SJunchao Zhang 11386a27549SJunchao Zhang PetscFunctionBegin; 1145f80ce2aSJacob Faibussowitsch PetscCheck(A->factortype == MAT_FACTOR_NONE, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Not supported for factorized matries"); 11586a27549SJunchao Zhang aijkok->a_dual.clear_sync_state(); 11686a27549SJunchao Zhang aijkok->a_dual.modify_device(); 11786a27549SJunchao Zhang aijkok->transpose_updated = PETSC_FALSE; 11886a27549SJunchao Zhang aijkok->hermitian_updated = PETSC_FALSE; 1199566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(A)); 1209566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 1213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12286a27549SJunchao Zhang } 12386a27549SJunchao Zhang 124d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJKokkosSyncHost(Mat A) 125d71ae5a4SJacob Faibussowitsch { 126f0cf5187SStefano Zampini Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1274df4a32cSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 128f0cf5187SStefano Zampini 129f0cf5187SStefano Zampini PetscFunctionBegin; 130f0cf5187SStefano Zampini PetscCheckTypeName(A, MATSEQAIJKOKKOS); 13186a27549SJunchao Zhang /* We do not expect one needs factors on host */ 132aaa8cc7dSPierre Jolivet PetscCheck(A->factortype == MAT_FACTOR_NONE, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Can't sync factorized matrix from device to host"); 1335f80ce2aSJacob Faibussowitsch PetscCheck(aijkok, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing AIJKOK"); 134aac854edSJunchao Zhang PetscCall(KokkosDualViewSync<HostMirrorMemorySpace>(aijkok->a_dual, exec)); 1353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 136f0cf5187SStefano Zampini } 137f0cf5187SStefano Zampini 138d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetArray_SeqAIJKokkos(Mat A, PetscScalar *array[]) 139d71ae5a4SJacob Faibussowitsch { 140076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 141f0cf5187SStefano Zampini 142f0cf5187SStefano Zampini PetscFunctionBegin; 1435519a089SJose E. Roman /* aijkok contains valid pointers only if the host's nonzerostate matches with the device's. 1445519a089SJose E. Roman Calling MatSeqAIJSetPreallocation() or MatSetValues() on host, where aijseq->{i,j,a} might be 1455519a089SJose E. Roman reallocated, will lead to stale {i,j,a}_dual in aijkok. In both operations, the hosts's nonzerostate 1465519a089SJose E. Roman must have been updated. The stale aijkok will be rebuilt during MatAssemblyEnd. 1475519a089SJose E. Roman */ 1485519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) { 1494df4a32cSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 150e36ced11SJunchao Zhang PetscCallCXX(aijkok->a_dual.sync_host(exec)); 151e36ced11SJunchao Zhang PetscCallCXX(exec.fence()); 152076ba34aSJunchao Zhang *array = aijkok->a_dual.view_host().data(); 153076ba34aSJunchao Zhang } else { /* Happens when calling MatSetValues on a newly created matrix */ 154076ba34aSJunchao Zhang *array = static_cast<Mat_SeqAIJ *>(A->data)->a; 155076ba34aSJunchao Zhang } 1563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 157076ba34aSJunchao Zhang } 158076ba34aSJunchao Zhang 159d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJRestoreArray_SeqAIJKokkos(Mat A, PetscScalar *array[]) 160d71ae5a4SJacob Faibussowitsch { 161076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 162076ba34aSJunchao Zhang 163076ba34aSJunchao Zhang PetscFunctionBegin; 1645519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) aijkok->a_dual.modify_host(); 1653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 166076ba34aSJunchao Zhang } 167076ba34aSJunchao Zhang 168d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetArrayRead_SeqAIJKokkos(Mat A, const PetscScalar *array[]) 169d71ae5a4SJacob Faibussowitsch { 170076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 171076ba34aSJunchao Zhang 172076ba34aSJunchao Zhang PetscFunctionBegin; 1735519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) { 1744df4a32cSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 175e36ced11SJunchao Zhang PetscCallCXX(aijkok->a_dual.sync_host(exec)); 176e36ced11SJunchao Zhang PetscCallCXX(exec.fence()); 177076ba34aSJunchao Zhang *array = aijkok->a_dual.view_host().data(); 1782328674fSJunchao Zhang } else { 1792328674fSJunchao Zhang *array = static_cast<Mat_SeqAIJ *>(A->data)->a; 1802328674fSJunchao Zhang } 1813ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 182076ba34aSJunchao Zhang } 183076ba34aSJunchao Zhang 184d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJRestoreArrayRead_SeqAIJKokkos(Mat A, const PetscScalar *array[]) 185d71ae5a4SJacob Faibussowitsch { 186076ba34aSJunchao Zhang PetscFunctionBegin; 187076ba34aSJunchao Zhang *array = NULL; 1883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 189076ba34aSJunchao Zhang } 190076ba34aSJunchao Zhang 191d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetArrayWrite_SeqAIJKokkos(Mat A, PetscScalar *array[]) 192d71ae5a4SJacob Faibussowitsch { 193076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 194076ba34aSJunchao Zhang 195076ba34aSJunchao Zhang PetscFunctionBegin; 1965519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) { 197076ba34aSJunchao Zhang *array = aijkok->a_dual.view_host().data(); 1982328674fSJunchao Zhang } else { /* Ex. happens with MatZeroEntries on a preallocated but not assembled matrix */ 1992328674fSJunchao Zhang *array = static_cast<Mat_SeqAIJ *>(A->data)->a; 2002328674fSJunchao Zhang } 2013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 202076ba34aSJunchao Zhang } 203076ba34aSJunchao Zhang 204d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJRestoreArrayWrite_SeqAIJKokkos(Mat A, PetscScalar *array[]) 205d71ae5a4SJacob Faibussowitsch { 206076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 207076ba34aSJunchao Zhang 208076ba34aSJunchao Zhang PetscFunctionBegin; 2095519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) { 210076ba34aSJunchao Zhang aijkok->a_dual.clear_sync_state(); 211076ba34aSJunchao Zhang aijkok->a_dual.modify_host(); 2122328674fSJunchao Zhang } 2133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 214f0cf5187SStefano Zampini } 215f0cf5187SStefano Zampini 216d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJGetCSRAndMemType_SeqAIJKokkos(Mat A, const PetscInt **i, const PetscInt **j, PetscScalar **a, PetscMemType *mtype) 217d71ae5a4SJacob Faibussowitsch { 2187ee59b9bSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 2197ee59b9bSJunchao Zhang 2207ee59b9bSJunchao Zhang PetscFunctionBegin; 2217ee59b9bSJunchao Zhang PetscCheck(aijkok != NULL, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "aijkok is NULL"); 2227ee59b9bSJunchao Zhang 2237ee59b9bSJunchao Zhang if (i) *i = aijkok->i_device_data(); 2247ee59b9bSJunchao Zhang if (j) *j = aijkok->j_device_data(); 2257ee59b9bSJunchao Zhang if (a) { 2267ee59b9bSJunchao Zhang aijkok->a_dual.sync_device(); 2277ee59b9bSJunchao Zhang *a = aijkok->a_device_data(); 2287ee59b9bSJunchao Zhang } 2297ee59b9bSJunchao Zhang if (mtype) *mtype = PETSC_MEMTYPE_KOKKOS; 2303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2317ee59b9bSJunchao Zhang } 2327ee59b9bSJunchao Zhang 2330e3ece09SJunchao Zhang /* 2340e3ece09SJunchao Zhang Generate the sparsity pattern of a MatSeqAIJKokkos matrix's transpose on device. 2350e3ece09SJunchao Zhang 2360e3ece09SJunchao Zhang Input Parameter: 2370e3ece09SJunchao Zhang . A - the MATSEQAIJKOKKOS matrix 2380e3ece09SJunchao Zhang 2390e3ece09SJunchao Zhang Output Parameters: 2400e3ece09SJunchao Zhang + perm_d - the permutation array on device, which connects Ta(i) = Aa(perm(i)) 241aaa8cc7dSPierre Jolivet - T_d - the transpose on device, whose value array is allocated but not initialized 2420e3ece09SJunchao Zhang */ 2430e3ece09SJunchao Zhang static PetscErrorCode MatSeqAIJKokkosGenerateTransposeStructure(Mat A, MatRowMapKokkosView &perm_d, KokkosCsrMatrix &T_d) 244d71ae5a4SJacob Faibussowitsch { 2450e3ece09SJunchao Zhang Mat_SeqAIJ *aseq = static_cast<Mat_SeqAIJ *>(A->data); 2460e3ece09SJunchao Zhang PetscInt nz = aseq->nz, m = A->rmap->N, n = A->cmap->n; 2470e3ece09SJunchao Zhang const PetscInt *Ai = aseq->i, *Aj = aseq->j; 2487b8d4ba6SJunchao Zhang MatRowMapKokkosViewHost Ti_h(NoInit("Ti"), n + 1); 2490e3ece09SJunchao Zhang MatRowMapType *Ti = Ti_h.data(); 2507b8d4ba6SJunchao Zhang MatColIdxKokkosViewHost Tj_h(NoInit("Tj"), nz); 2517b8d4ba6SJunchao Zhang MatRowMapKokkosViewHost perm_h(NoInit("permutation"), nz); 2520e3ece09SJunchao Zhang PetscInt *Tj = Tj_h.data(); 2530e3ece09SJunchao Zhang PetscInt *perm = perm_h.data(); 2540e3ece09SJunchao Zhang PetscInt *offset; 255152b3e56SJunchao Zhang 256152b3e56SJunchao Zhang PetscFunctionBegin; 2570e3ece09SJunchao Zhang // Populate Ti 2580e3ece09SJunchao Zhang PetscCallCXX(Kokkos::deep_copy(Ti_h, 0)); 2590e3ece09SJunchao Zhang Ti++; 2600e3ece09SJunchao Zhang for (PetscInt i = 0; i < nz; i++) Ti[Aj[i]]++; 2610e3ece09SJunchao Zhang Ti--; 2620e3ece09SJunchao Zhang for (PetscInt i = 0; i < n; i++) Ti[i + 1] += Ti[i]; 2630e3ece09SJunchao Zhang 2640e3ece09SJunchao Zhang // Populate Tj and the permutation array 2650e3ece09SJunchao Zhang PetscCall(PetscCalloc1(n, &offset)); // offset in each T row to fill in its column indices 2660e3ece09SJunchao Zhang for (PetscInt i = 0; i < m; i++) { 2670e3ece09SJunchao Zhang for (PetscInt j = Ai[i]; j < Ai[i + 1]; j++) { // A's (i,j) is T's (j,i) 2680e3ece09SJunchao Zhang PetscInt r = Aj[j]; // row r of T 2690e3ece09SJunchao Zhang PetscInt disp = Ti[r] + offset[r]; 2700e3ece09SJunchao Zhang 2710e3ece09SJunchao Zhang Tj[disp] = i; // col i of T 2720e3ece09SJunchao Zhang perm[disp] = j; 2730e3ece09SJunchao Zhang offset[r]++; 274076ba34aSJunchao Zhang } 2750e3ece09SJunchao Zhang } 2760e3ece09SJunchao Zhang PetscCall(PetscFree(offset)); 2770e3ece09SJunchao Zhang 2780e3ece09SJunchao Zhang // Sort each row of T, along with the permutation array 2790e3ece09SJunchao Zhang for (PetscInt i = 0; i < n; i++) PetscCall(PetscSortIntWithArray(Ti[i + 1] - Ti[i], Tj + Ti[i], perm + Ti[i])); 2800e3ece09SJunchao Zhang 2810e3ece09SJunchao Zhang // Output perm and T on device 2820e3ece09SJunchao Zhang auto Ti_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Ti_h); 2830e3ece09SJunchao Zhang auto Tj_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), Tj_h); 2840e3ece09SJunchao Zhang PetscCallCXX(T_d = KokkosCsrMatrix("csrmatT", n, m, nz, MatScalarKokkosView("Ta", nz), Ti_d, Tj_d)); 2850e3ece09SJunchao Zhang PetscCallCXX(perm_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), perm_h)); 2863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 287152b3e56SJunchao Zhang } 288152b3e56SJunchao Zhang 2890e3ece09SJunchao Zhang // Generate the transpose on device and cache it internally 2900e3ece09SJunchao Zhang // Note: KK transpose_matrix() does not have support symbolic/numeric transpose, so we do it on our own 2910e3ece09SJunchao Zhang PETSC_INTERN PetscErrorCode MatSeqAIJKokkosGenerateTranspose_Private(Mat A, KokkosCsrMatrix *csrmatT) 292d71ae5a4SJacob Faibussowitsch { 2930e3ece09SJunchao Zhang Mat_SeqAIJ *aseq = static_cast<Mat_SeqAIJ *>(A->data); 2940e3ece09SJunchao Zhang Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 2950e3ece09SJunchao Zhang PetscInt nz = aseq->nz, m = A->rmap->N, n = A->cmap->n; 2960e3ece09SJunchao Zhang KokkosCsrMatrix &T = akok->csrmatT; 297152b3e56SJunchao Zhang 298152b3e56SJunchao Zhang PetscFunctionBegin; 2990e3ece09SJunchao Zhang PetscCheck(akok, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr"); 300145b44c9SPierre Jolivet PetscCallCXX(akok->a_dual.sync_device()); // Sync A's values since we are going to access them on device 3010e3ece09SJunchao Zhang 3020e3ece09SJunchao Zhang const auto &Aa = akok->a_dual.view_device(); 3030e3ece09SJunchao Zhang 3040e3ece09SJunchao Zhang if (A->symmetric == PETSC_BOOL3_TRUE) { 3050e3ece09SJunchao Zhang *csrmatT = akok->csrmat; 3060e3ece09SJunchao Zhang } else { 3070e3ece09SJunchao Zhang // See if we already have a cached transpose and its value is up to date 3080e3ece09SJunchao Zhang if (T.numRows() == n && T.numCols() == m) { // this indicates csrmatT had been generated before, otherwise T has 0 rows/cols after construction 3090e3ece09SJunchao Zhang if (!akok->transpose_updated) { // if the value is out of date, update the cached version 3100e3ece09SJunchao Zhang const auto &perm = akok->transpose_perm; // get the permutation array 3110e3ece09SJunchao Zhang auto &Ta = T.values; 3120e3ece09SJunchao Zhang 313d326c3f1SJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt i) { Ta(i) = Aa(perm(i)); })); 314076ba34aSJunchao Zhang } 3150e3ece09SJunchao Zhang } else { // Generate T of size n x m for the first time 3160e3ece09SJunchao Zhang MatRowMapKokkosView perm; 3170e3ece09SJunchao Zhang 3180e3ece09SJunchao Zhang PetscCall(MatSeqAIJKokkosGenerateTransposeStructure(A, perm, T)); 3190e3ece09SJunchao Zhang akok->transpose_perm = perm; // cache the perm in this matrix for reuse 320d326c3f1SJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt i) { T.values(i) = Aa(perm(i)); })); 3210e3ece09SJunchao Zhang } 3220e3ece09SJunchao Zhang akok->transpose_updated = PETSC_TRUE; 3230e3ece09SJunchao Zhang *csrmatT = akok->csrmatT; 3240e3ece09SJunchao Zhang } 3250e3ece09SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 3260e3ece09SJunchao Zhang } 3270e3ece09SJunchao Zhang 3280e3ece09SJunchao Zhang // Generate the Hermitian on device and cache it internally 3290e3ece09SJunchao Zhang static PetscErrorCode MatSeqAIJKokkosGenerateHermitian_Private(Mat A, KokkosCsrMatrix *csrmatH) 3300e3ece09SJunchao Zhang { 3310e3ece09SJunchao Zhang Mat_SeqAIJ *aseq = static_cast<Mat_SeqAIJ *>(A->data); 3320e3ece09SJunchao Zhang Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 3330e3ece09SJunchao Zhang PetscInt nz = aseq->nz, m = A->rmap->N, n = A->cmap->n; 3340e3ece09SJunchao Zhang KokkosCsrMatrix &T = akok->csrmatH; 3350e3ece09SJunchao Zhang 3360e3ece09SJunchao Zhang PetscFunctionBegin; 3370e3ece09SJunchao Zhang PetscCheck(akok, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr"); 3380e3ece09SJunchao Zhang PetscCallCXX(akok->a_dual.sync_device()); // Sync A's values since we are going to access them on device 3390e3ece09SJunchao Zhang 3400e3ece09SJunchao Zhang const auto &Aa = akok->a_dual.view_device(); 3410e3ece09SJunchao Zhang 3420e3ece09SJunchao Zhang if (A->hermitian == PETSC_BOOL3_TRUE) { 3430e3ece09SJunchao Zhang *csrmatH = akok->csrmat; 3440e3ece09SJunchao Zhang } else { 3450e3ece09SJunchao Zhang // See if we already have a cached hermitian and its value is up to date 3460e3ece09SJunchao Zhang if (T.numRows() == n && T.numCols() == m) { // this indicates csrmatT had been generated before, otherwise T has 0 rows/cols after construction 3470e3ece09SJunchao Zhang if (!akok->hermitian_updated) { // if the value is out of date, update the cached version 3480e3ece09SJunchao Zhang const auto &perm = akok->transpose_perm; // get the permutation array 3490e3ece09SJunchao Zhang auto &Ta = T.values; 3500e3ece09SJunchao Zhang 351d326c3f1SJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt i) { Ta(i) = PetscConj(Aa(perm(i))); })); 3520e3ece09SJunchao Zhang } 3530e3ece09SJunchao Zhang } else { // Generate T of size n x m for the first time 3540e3ece09SJunchao Zhang MatRowMapKokkosView perm; 3550e3ece09SJunchao Zhang 3560e3ece09SJunchao Zhang PetscCall(MatSeqAIJKokkosGenerateTransposeStructure(A, perm, T)); 3570e3ece09SJunchao Zhang akok->transpose_perm = perm; // cache the perm in this matrix for reuse 358d326c3f1SJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt i) { T.values(i) = PetscConj(Aa(perm(i))); })); 3590e3ece09SJunchao Zhang } 3600e3ece09SJunchao Zhang akok->hermitian_updated = PETSC_TRUE; 3610e3ece09SJunchao Zhang *csrmatH = akok->csrmatH; 3620e3ece09SJunchao Zhang } 3633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 364152b3e56SJunchao Zhang } 365a587d139SMark 3668c3ff71bSJunchao Zhang /* y = A x */ 367d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMult_SeqAIJKokkos(Mat A, Vec xx, Vec yy) 368d71ae5a4SJacob Faibussowitsch { 3698c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 370152b3e56SJunchao Zhang ConstPetscScalarKokkosView xv; 371152b3e56SJunchao Zhang PetscScalarKokkosView yv; 3728c3ff71bSJunchao Zhang 3738c3ff71bSJunchao Zhang PetscFunctionBegin; 3749566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 3759566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 3769566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx, &xv)); 3779566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(yy, &yv)); 3788c3ff71bSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 379d326c3f1SJunchao Zhang PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), "N", 1.0 /*alpha*/, aijkok->csrmat, xv, 0.0 /*beta*/, yv)); /* y = alpha A x + beta y */ 3809566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx, &xv)); 3819566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(yy, &yv)); 382076ba34aSJunchao Zhang /* 2.0*nnz - numRows seems more accurate here but assumes there are no zero-rows. So a little sloppy here. */ 3839566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0 * aijkok->csrmat.nnz())); 3849566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 3853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3868c3ff71bSJunchao Zhang } 3878c3ff71bSJunchao Zhang 3888c3ff71bSJunchao Zhang /* y = A^T x */ 389d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultTranspose_SeqAIJKokkos(Mat A, Vec xx, Vec yy) 390d71ae5a4SJacob Faibussowitsch { 3918c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 392152b3e56SJunchao Zhang const char *mode; 393152b3e56SJunchao Zhang ConstPetscScalarKokkosView xv; 394152b3e56SJunchao Zhang PetscScalarKokkosView yv; 3950e3ece09SJunchao Zhang KokkosCsrMatrix csrmat; 3968c3ff71bSJunchao Zhang 3978c3ff71bSJunchao Zhang PetscFunctionBegin; 3989566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 3999566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 4009566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx, &xv)); 4019566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(yy, &yv)); 402152b3e56SJunchao Zhang if (A->form_explicit_transpose) { 4039566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &csrmat)); 404152b3e56SJunchao Zhang mode = "N"; 405152b3e56SJunchao Zhang } else { 406076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 4070e3ece09SJunchao Zhang csrmat = aijkok->csrmat; 408152b3e56SJunchao Zhang mode = "T"; 409152b3e56SJunchao Zhang } 410d326c3f1SJunchao Zhang PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), mode, 1.0 /*alpha*/, csrmat, xv, 0.0 /*beta*/, yv)); /* y = alpha A^T x + beta y */ 4119566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx, &xv)); 4129566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(yy, &yv)); 4130e3ece09SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0 * csrmat.nnz())); 4149566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 4153ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4168c3ff71bSJunchao Zhang } 4178c3ff71bSJunchao Zhang 4188c3ff71bSJunchao Zhang /* y = A^H x */ 419d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultHermitianTranspose_SeqAIJKokkos(Mat A, Vec xx, Vec yy) 420d71ae5a4SJacob Faibussowitsch { 4218c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 422152b3e56SJunchao Zhang const char *mode; 423152b3e56SJunchao Zhang ConstPetscScalarKokkosView xv; 424152b3e56SJunchao Zhang PetscScalarKokkosView yv; 4250e3ece09SJunchao Zhang KokkosCsrMatrix csrmat; 4268c3ff71bSJunchao Zhang 4278c3ff71bSJunchao Zhang PetscFunctionBegin; 4289566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 4299566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 4309566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx, &xv)); 4319566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(yy, &yv)); 432152b3e56SJunchao Zhang if (A->form_explicit_transpose) { 4339566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateHermitian_Private(A, &csrmat)); 434152b3e56SJunchao Zhang mode = "N"; 435152b3e56SJunchao Zhang } else { 436076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 4370e3ece09SJunchao Zhang csrmat = aijkok->csrmat; 438152b3e56SJunchao Zhang mode = "C"; 439152b3e56SJunchao Zhang } 440d326c3f1SJunchao Zhang PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), mode, 1.0 /*alpha*/, csrmat, xv, 0.0 /*beta*/, yv)); /* y = alpha A^H x + beta y */ 4419566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx, &xv)); 4429566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(yy, &yv)); 4430e3ece09SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0 * csrmat.nnz())); 4449566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 4453ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4468c3ff71bSJunchao Zhang } 4478c3ff71bSJunchao Zhang 4488c3ff71bSJunchao Zhang /* z = A x + y */ 449d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultAdd_SeqAIJKokkos(Mat A, Vec xx, Vec yy, Vec zz) 450d71ae5a4SJacob Faibussowitsch { 4518c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 45292896123SJunchao Zhang ConstPetscScalarKokkosView xv; 453152b3e56SJunchao Zhang PetscScalarKokkosView zv; 4548c3ff71bSJunchao Zhang 4558c3ff71bSJunchao Zhang PetscFunctionBegin; 4569566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 4579566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 45892896123SJunchao Zhang if (zz != yy) PetscCall(VecCopy(yy, zz)); // depending on yy's sync flags, zz might get its latest data on host 4599566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx, &xv)); 46092896123SJunchao Zhang PetscCall(VecGetKokkosView(zz, &zv)); // do after VecCopy(yy, zz) to get the latest data on device 4618c3ff71bSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 462d326c3f1SJunchao Zhang PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), "N", 1.0 /*alpha*/, aijkok->csrmat, xv, 1.0 /*beta*/, zv)); /* z = alpha A x + beta z */ 4639566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx, &xv)); 46492896123SJunchao Zhang PetscCall(VecRestoreKokkosView(zz, &zv)); 4659566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0 * aijkok->csrmat.nnz())); 4669566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 4673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4688c3ff71bSJunchao Zhang } 4698c3ff71bSJunchao Zhang 4708c3ff71bSJunchao Zhang /* z = A^T x + y */ 471d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultTransposeAdd_SeqAIJKokkos(Mat A, Vec xx, Vec yy, Vec zz) 472d71ae5a4SJacob Faibussowitsch { 4738c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 474152b3e56SJunchao Zhang const char *mode; 47592896123SJunchao Zhang ConstPetscScalarKokkosView xv; 476152b3e56SJunchao Zhang PetscScalarKokkosView zv; 4770e3ece09SJunchao Zhang KokkosCsrMatrix csrmat; 4788c3ff71bSJunchao Zhang 4798c3ff71bSJunchao Zhang PetscFunctionBegin; 4809566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 4819566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 48292896123SJunchao Zhang if (zz != yy) PetscCall(VecCopy(yy, zz)); 4839566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx, &xv)); 48492896123SJunchao Zhang PetscCall(VecGetKokkosView(zz, &zv)); 485152b3e56SJunchao Zhang if (A->form_explicit_transpose) { 4869566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &csrmat)); 487152b3e56SJunchao Zhang mode = "N"; 488152b3e56SJunchao Zhang } else { 489076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 4900e3ece09SJunchao Zhang csrmat = aijkok->csrmat; 491152b3e56SJunchao Zhang mode = "T"; 492152b3e56SJunchao Zhang } 493d326c3f1SJunchao Zhang PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), mode, 1.0 /*alpha*/, csrmat, xv, 1.0 /*beta*/, zv)); /* z = alpha A^T x + beta z */ 4949566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx, &xv)); 49592896123SJunchao Zhang PetscCall(VecRestoreKokkosView(zz, &zv)); 4960e3ece09SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0 * csrmat.nnz())); 4979566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 4983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4998c3ff71bSJunchao Zhang } 5008c3ff71bSJunchao Zhang 5018c3ff71bSJunchao Zhang /* z = A^H x + y */ 502d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJKokkos(Mat A, Vec xx, Vec yy, Vec zz) 503d71ae5a4SJacob Faibussowitsch { 5048c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 505152b3e56SJunchao Zhang const char *mode; 50692896123SJunchao Zhang ConstPetscScalarKokkosView xv; 507152b3e56SJunchao Zhang PetscScalarKokkosView zv; 5080e3ece09SJunchao Zhang KokkosCsrMatrix csrmat; 5098c3ff71bSJunchao Zhang 5108c3ff71bSJunchao Zhang PetscFunctionBegin; 5119566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 5129566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 51392896123SJunchao Zhang if (zz != yy) PetscCall(VecCopy(yy, zz)); 5149566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx, &xv)); 51592896123SJunchao Zhang PetscCall(VecGetKokkosView(zz, &zv)); 516152b3e56SJunchao Zhang if (A->form_explicit_transpose) { 5179566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateHermitian_Private(A, &csrmat)); 518152b3e56SJunchao Zhang mode = "N"; 519152b3e56SJunchao Zhang } else { 520076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 5210e3ece09SJunchao Zhang csrmat = aijkok->csrmat; 522152b3e56SJunchao Zhang mode = "C"; 523152b3e56SJunchao Zhang } 524d326c3f1SJunchao Zhang PetscCallCXX(KokkosSparse::spmv(PetscGetKokkosExecutionSpace(), mode, 1.0 /*alpha*/, csrmat, xv, 1.0 /*beta*/, zv)); /* z = alpha A^H x + beta z */ 5259566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx, &xv)); 52692896123SJunchao Zhang PetscCall(VecRestoreKokkosView(zz, &zv)); 5270e3ece09SJunchao Zhang PetscCall(PetscLogGpuFlops(2.0 * csrmat.nnz())); 5289566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 5293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 530152b3e56SJunchao Zhang } 531152b3e56SJunchao Zhang 53266976f2fSJacob Faibussowitsch static PetscErrorCode MatSetOption_SeqAIJKokkos(Mat A, MatOption op, PetscBool flg) 533d71ae5a4SJacob Faibussowitsch { 534152b3e56SJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 535152b3e56SJunchao Zhang 536152b3e56SJunchao Zhang PetscFunctionBegin; 537152b3e56SJunchao Zhang switch (op) { 538152b3e56SJunchao Zhang case MAT_FORM_EXPLICIT_TRANSPOSE: 539152b3e56SJunchao Zhang /* need to destroy the transpose matrix if present to prevent from logic errors if flg is set to true later */ 5409566063dSJacob Faibussowitsch if (A->form_explicit_transpose && !flg && aijkok) PetscCall(aijkok->DestroyMatTranspose()); 541152b3e56SJunchao Zhang A->form_explicit_transpose = flg; 542152b3e56SJunchao Zhang break; 543d71ae5a4SJacob Faibussowitsch default: 544d71ae5a4SJacob Faibussowitsch PetscCall(MatSetOption_SeqAIJ(A, op, flg)); 545d71ae5a4SJacob Faibussowitsch break; 546152b3e56SJunchao Zhang } 5473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5488c3ff71bSJunchao Zhang } 5498c3ff71bSJunchao Zhang 550076ba34aSJunchao Zhang /* Depending on reuse, either build a new mat, or use the existing mat */ 551d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJKokkos(Mat A, MatType mtype, MatReuse reuse, Mat *newmat) 552d71ae5a4SJacob Faibussowitsch { 553076ba34aSJunchao Zhang Mat_SeqAIJ *aseq; 5548c3ff71bSJunchao Zhang 5558c3ff71bSJunchao Zhang PetscFunctionBegin; 5569566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 557076ba34aSJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { /* Build a brand new mat */ 5589566063dSJacob Faibussowitsch PetscCall(MatDuplicate(A, MAT_COPY_VALUES, newmat)); /* the returned newmat is a SeqAIJKokkos */ 5598c3ff71bSJunchao Zhang } else if (reuse == MAT_REUSE_MATRIX) { /* Reuse the mat created before */ 5609566063dSJacob Faibussowitsch PetscCall(MatCopy(A, *newmat, SAME_NONZERO_PATTERN)); /* newmat is already a SeqAIJKokkos */ 561076ba34aSJunchao Zhang } else if (reuse == MAT_INPLACE_MATRIX) { /* newmat is A */ 5625f80ce2aSJacob Faibussowitsch PetscCheck(A == *newmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "A != *newmat with MAT_INPLACE_MATRIX"); 5639566063dSJacob Faibussowitsch PetscCall(PetscFree(A->defaultvectype)); 5649566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(VECKOKKOS, &A->defaultvectype)); /* Allocate and copy the string */ 5659566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)A, MATSEQAIJKOKKOS)); 5669566063dSJacob Faibussowitsch PetscCall(MatSetOps_SeqAIJKokkos(A)); 567076ba34aSJunchao Zhang aseq = static_cast<Mat_SeqAIJ *>(A->data); 568394ed5ebSJunchao Zhang if (A->assembled) { /* Copy i, j (but not values) to device for an assembled matrix if not yet */ 5695f80ce2aSJacob Faibussowitsch PetscCheck(!A->spptr, PETSC_COMM_WORLD, PETSC_ERR_PLIB, "Expect NULL (Mat_SeqAIJKokkos*)A->spptr"); 570f4747e26SJunchao Zhang A->spptr = new Mat_SeqAIJKokkos(A->rmap->n, A->cmap->n, aseq, A->nonzerostate, PETSC_FALSE); 5718c3ff71bSJunchao Zhang } 572076ba34aSJunchao Zhang } 5733ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5748c3ff71bSJunchao Zhang } 5758c3ff71bSJunchao Zhang 576076ba34aSJunchao Zhang /* MatDuplicate always creates a new matrix. MatDuplicate can be called either on an assembled matrix or 577076ba34aSJunchao Zhang an unassembled matrix, even though MAT_COPY_VALUES is not allowed for unassembled matrix. 578076ba34aSJunchao Zhang */ 579d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDuplicate_SeqAIJKokkos(Mat A, MatDuplicateOption dupOption, Mat *B) 580d71ae5a4SJacob Faibussowitsch { 581076ba34aSJunchao Zhang Mat_SeqAIJ *bseq; 582076ba34aSJunchao Zhang Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr), *bkok; 583076ba34aSJunchao Zhang Mat mat; 5848c3ff71bSJunchao Zhang 5858c3ff71bSJunchao Zhang PetscFunctionBegin; 586076ba34aSJunchao Zhang /* Do not copy values on host as A's latest values might be on device. We don't want to do sync blindly */ 5879566063dSJacob Faibussowitsch PetscCall(MatDuplicate_SeqAIJ(A, MAT_DO_NOT_COPY_VALUES, B)); 588076ba34aSJunchao Zhang mat = *B; 589f4747e26SJunchao Zhang if (A->assembled) { 590076ba34aSJunchao Zhang bseq = static_cast<Mat_SeqAIJ *>(mat->data); 591f4747e26SJunchao Zhang bkok = new Mat_SeqAIJKokkos(mat->rmap->n, mat->cmap->n, bseq, mat->nonzerostate, PETSC_FALSE); 592076ba34aSJunchao Zhang bkok->a_dual.clear_sync_state(); /* Clear B's sync state as it will be decided below */ 593076ba34aSJunchao Zhang /* Now copy values to B if needed */ 594076ba34aSJunchao Zhang if (dupOption == MAT_COPY_VALUES) { 595076ba34aSJunchao Zhang if (akok->a_dual.need_sync_device()) { 596076ba34aSJunchao Zhang Kokkos::deep_copy(bkok->a_dual.view_host(), akok->a_dual.view_host()); 597076ba34aSJunchao Zhang bkok->a_dual.modify_host(); 598076ba34aSJunchao Zhang } else { /* If device has the latest data, we only copy data on device */ 599076ba34aSJunchao Zhang Kokkos::deep_copy(bkok->a_dual.view_device(), akok->a_dual.view_device()); 600076ba34aSJunchao Zhang bkok->a_dual.modify_device(); 601076ba34aSJunchao Zhang } 602076ba34aSJunchao Zhang } else { /* MAT_DO_NOT_COPY_VALUES or MAT_SHARE_NONZERO_PATTERN. B's values should be zeroed */ 603076ba34aSJunchao Zhang /* B's values on host should be already zeroed by MatDuplicate_SeqAIJ() */ 604076ba34aSJunchao Zhang bkok->a_dual.modify_host(); 605076ba34aSJunchao Zhang } 606076ba34aSJunchao Zhang mat->spptr = bkok; 607076ba34aSJunchao Zhang } 608076ba34aSJunchao Zhang 6099566063dSJacob Faibussowitsch PetscCall(PetscFree(mat->defaultvectype)); 6109566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(VECKOKKOS, &mat->defaultvectype)); /* Allocate and copy the string */ 6119566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATSEQAIJKOKKOS)); 6129566063dSJacob Faibussowitsch PetscCall(MatSetOps_SeqAIJKokkos(mat)); 6133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6148c3ff71bSJunchao Zhang } 6158c3ff71bSJunchao Zhang 616d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTranspose_SeqAIJKokkos(Mat A, MatReuse reuse, Mat *B) 617d71ae5a4SJacob Faibussowitsch { 6180ecb592aSJunchao Zhang Mat At; 6190e3ece09SJunchao Zhang KokkosCsrMatrix internT; 6200ecb592aSJunchao Zhang Mat_SeqAIJKokkos *atkok, *bkok; 6210ecb592aSJunchao Zhang 6220ecb592aSJunchao Zhang PetscFunctionBegin; 6237fb60732SBarry Smith if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *B)); 6249566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &internT)); /* Generate a transpose internally */ 6250ecb592aSJunchao Zhang if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { 626ff751488SJunchao Zhang /* Deep copy internT, as we want to isolate the internal transpose */ 6270e3ece09SJunchao Zhang PetscCallCXX(atkok = new Mat_SeqAIJKokkos(KokkosCsrMatrix("csrmat", internT))); 6289566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PetscObjectComm((PetscObject)A), atkok, &At)); 6290ecb592aSJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) *B = At; 6309566063dSJacob Faibussowitsch else PetscCall(MatHeaderReplace(A, &At)); /* Replace A with At inplace */ 6310ecb592aSJunchao Zhang } else { /* MAT_REUSE_MATRIX, just need to copy values to B on device */ 6320ecb592aSJunchao Zhang if ((*B)->assembled) { 6330ecb592aSJunchao Zhang bkok = static_cast<Mat_SeqAIJKokkos *>((*B)->spptr); 6340e3ece09SJunchao Zhang PetscCallCXX(Kokkos::deep_copy(bkok->a_dual.view_device(), internT.values)); 6359566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(*B)); 6360ecb592aSJunchao Zhang } else if ((*B)->preallocated) { /* It is ok for B to be only preallocated, as needed in MatTranspose_MPIAIJ */ 6370ecb592aSJunchao Zhang Mat_SeqAIJ *bseq = static_cast<Mat_SeqAIJ *>((*B)->data); 6380e3ece09SJunchao Zhang MatScalarKokkosViewHost a_h(bseq->a, internT.nnz()); /* bseq->nz = 0 if unassembled */ 6390e3ece09SJunchao Zhang MatColIdxKokkosViewHost j_h(bseq->j, internT.nnz()); 6400e3ece09SJunchao Zhang PetscCallCXX(Kokkos::deep_copy(a_h, internT.values)); 6410e3ece09SJunchao Zhang PetscCallCXX(Kokkos::deep_copy(j_h, internT.graph.entries)); 6420ecb592aSJunchao Zhang } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "B must be assembled or preallocated"); 6430ecb592aSJunchao Zhang } 6443ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6450ecb592aSJunchao Zhang } 6460ecb592aSJunchao Zhang 647d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDestroy_SeqAIJKokkos(Mat A) 648d71ae5a4SJacob Faibussowitsch { 64986a27549SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 6508c3ff71bSJunchao Zhang 6518c3ff71bSJunchao Zhang PetscFunctionBegin; 65286a27549SJunchao Zhang if (A->factortype == MAT_FACTOR_NONE) { 65386a27549SJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 6548c3ff71bSJunchao Zhang delete aijkok; 65586a27549SJunchao Zhang } else { 65686a27549SJunchao Zhang delete static_cast<Mat_SeqAIJKokkosTriFactors *>(A->spptr); 65786a27549SJunchao Zhang } 658cbc6b225SStefano Zampini A->spptr = NULL; 6599566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatFactorGetSolverType_C", NULL)); 6609566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetPreallocationCOO_C", NULL)); 6619566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetValuesCOO_C", NULL)); 66257761e9aSJunchao Zhang #if defined(PETSC_HAVE_HYPRE) 66357761e9aSJunchao Zhang PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatConvert_seqaijkokkos_hypre_C", NULL)); 66457761e9aSJunchao Zhang #endif 6659566063dSJacob Faibussowitsch PetscCall(MatDestroy_SeqAIJ(A)); 6663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6678c3ff71bSJunchao Zhang } 6688c3ff71bSJunchao Zhang 6693f3ba80aSJunchao Zhang /*MC 6703f3ba80aSJunchao Zhang MATSEQAIJKOKKOS - MATAIJKOKKOS = "(seq)aijkokkos" - A matrix type to be used for sparse matrices with Kokkos 6713f3ba80aSJunchao Zhang 67215229ffcSPierre Jolivet A matrix type using Kokkos-Kernels CrsMatrix type for portability across different device types 6733f3ba80aSJunchao Zhang 6742ef1f0ffSBarry Smith Options Database Key: 67511a5261eSBarry Smith . -mat_type aijkokkos - sets the matrix type to `MATSEQAIJKOKKOS` during a call to `MatSetFromOptions()` 6763f3ba80aSJunchao Zhang 6773f3ba80aSJunchao Zhang Level: beginner 6783f3ba80aSJunchao Zhang 6791cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreateSeqAIJKokkos()`, `MATMPIAIJKOKKOS` 6803f3ba80aSJunchao Zhang M*/ 681d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatCreate_SeqAIJKokkos(Mat A) 682d71ae5a4SJacob Faibussowitsch { 68386a27549SJunchao Zhang PetscFunctionBegin; 6849566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 6859566063dSJacob Faibussowitsch PetscCall(MatCreate_SeqAIJ(A)); 6869566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqAIJKokkos(A, MATSEQAIJKOKKOS, MAT_INPLACE_MATRIX, &A)); 6873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 68886a27549SJunchao Zhang } 68986a27549SJunchao Zhang 690076ba34aSJunchao Zhang /* Merge A, B into a matrix C. A is put before B. C's size would be A->rmap->n by (A->cmap->n + B->cmap->n) */ 691d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJKokkosMergeMats(Mat A, Mat B, MatReuse reuse, Mat *C) 692d71ae5a4SJacob Faibussowitsch { 693076ba34aSJunchao Zhang Mat_SeqAIJ *a, *b; 694076ba34aSJunchao Zhang Mat_SeqAIJKokkos *akok, *bkok, *ckok; 695076ba34aSJunchao Zhang MatScalarKokkosView aa, ba, ca; 696076ba34aSJunchao Zhang MatRowMapKokkosView ai, bi, ci; 697076ba34aSJunchao Zhang MatColIdxKokkosView aj, bj, cj; 698076ba34aSJunchao Zhang PetscInt m, n, nnz, aN; 699a3f881fbSStefano Zampini 700a3f881fbSStefano Zampini PetscFunctionBegin; 701076ba34aSJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 702076ba34aSJunchao Zhang PetscValidHeaderSpecific(B, MAT_CLASSID, 2); 7034f572ea9SToby Isaac PetscAssertPointer(C, 4); 704076ba34aSJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 705076ba34aSJunchao Zhang PetscCheckTypeName(B, MATSEQAIJKOKKOS); 7065f80ce2aSJacob Faibussowitsch PetscCheck(A->rmap->n == B->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Invalid number or rows %" PetscInt_FMT " != %" PetscInt_FMT, A->rmap->n, B->rmap->n); 7075f80ce2aSJacob Faibussowitsch PetscCheck(reuse != MAT_INPLACE_MATRIX, PETSC_COMM_SELF, PETSC_ERR_SUP, "MAT_INPLACE_MATRIX not supported"); 708076ba34aSJunchao Zhang 7099566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 7109566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(B)); 711076ba34aSJunchao Zhang a = static_cast<Mat_SeqAIJ *>(A->data); 712076ba34aSJunchao Zhang b = static_cast<Mat_SeqAIJ *>(B->data); 713076ba34aSJunchao Zhang akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 714076ba34aSJunchao Zhang bkok = static_cast<Mat_SeqAIJKokkos *>(B->spptr); 715076ba34aSJunchao Zhang aa = akok->a_dual.view_device(); 716076ba34aSJunchao Zhang ai = akok->i_dual.view_device(); 717076ba34aSJunchao Zhang ba = bkok->a_dual.view_device(); 718076ba34aSJunchao Zhang bi = bkok->i_dual.view_device(); 719076ba34aSJunchao Zhang m = A->rmap->n; /* M, N and nnz of C */ 720076ba34aSJunchao Zhang n = A->cmap->n + B->cmap->n; 721076ba34aSJunchao Zhang nnz = a->nz + b->nz; 722076ba34aSJunchao Zhang aN = A->cmap->n; /* N of A */ 723076ba34aSJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { 724076ba34aSJunchao Zhang aj = akok->j_dual.view_device(); 725076ba34aSJunchao Zhang bj = bkok->j_dual.view_device(); 726076ba34aSJunchao Zhang auto ca_dual = MatScalarKokkosDualView("a", aa.extent(0) + ba.extent(0)); 727076ba34aSJunchao Zhang auto ci_dual = MatRowMapKokkosDualView("i", ai.extent(0)); 728076ba34aSJunchao Zhang auto cj_dual = MatColIdxKokkosDualView("j", aj.extent(0) + bj.extent(0)); 729076ba34aSJunchao Zhang ca = ca_dual.view_device(); 730076ba34aSJunchao Zhang ci = ci_dual.view_device(); 731076ba34aSJunchao Zhang cj = cj_dual.view_device(); 732076ba34aSJunchao Zhang 733076ba34aSJunchao Zhang /* Concatenate A and B in parallel using Kokkos hierarchical parallelism */ 7349371c9d4SSatish Balay Kokkos::parallel_for( 735d326c3f1SJunchao Zhang Kokkos::TeamPolicy<>(PetscGetKokkosExecutionSpace(), m, Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 736076ba34aSJunchao Zhang PetscInt i = t.league_rank(); /* row i */ 737076ba34aSJunchao Zhang PetscInt coffset = ai(i) + bi(i), alen = ai(i + 1) - ai(i), blen = bi(i + 1) - bi(i); 738076ba34aSJunchao Zhang 739076ba34aSJunchao Zhang Kokkos::single(Kokkos::PerTeam(t), [=]() { /* this side effect only happens once per whole team */ 740076ba34aSJunchao Zhang ci(i) = coffset; 741076ba34aSJunchao Zhang if (i == m - 1) ci(m) = ai(m) + bi(m); 742076ba34aSJunchao Zhang }); 743076ba34aSJunchao Zhang 744076ba34aSJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(t, alen + blen), [&](PetscInt k) { 745076ba34aSJunchao Zhang if (k < alen) { 746076ba34aSJunchao Zhang ca(coffset + k) = aa(ai(i) + k); 747076ba34aSJunchao Zhang cj(coffset + k) = aj(ai(i) + k); 748076ba34aSJunchao Zhang } else { 749076ba34aSJunchao Zhang ca(coffset + k) = ba(bi(i) + k - alen); 750076ba34aSJunchao Zhang cj(coffset + k) = bj(bi(i) + k - alen) + aN; /* Entries in B get new column indices in C */ 751076ba34aSJunchao Zhang } 752076ba34aSJunchao Zhang }); 753076ba34aSJunchao Zhang }); 754076ba34aSJunchao Zhang ca_dual.modify_device(); 755076ba34aSJunchao Zhang ci_dual.modify_device(); 756076ba34aSJunchao Zhang cj_dual.modify_device(); 7579566063dSJacob Faibussowitsch PetscCallCXX(ckok = new Mat_SeqAIJKokkos(m, n, nnz, ci_dual, cj_dual, ca_dual)); 7589566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF, ckok, C)); 759076ba34aSJunchao Zhang } else if (reuse == MAT_REUSE_MATRIX) { 760076ba34aSJunchao Zhang PetscValidHeaderSpecific(*C, MAT_CLASSID, 4); 761076ba34aSJunchao Zhang PetscCheckTypeName(*C, MATSEQAIJKOKKOS); 762076ba34aSJunchao Zhang ckok = static_cast<Mat_SeqAIJKokkos *>((*C)->spptr); 763076ba34aSJunchao Zhang ca = ckok->a_dual.view_device(); 764076ba34aSJunchao Zhang ci = ckok->i_dual.view_device(); 765076ba34aSJunchao Zhang 7669371c9d4SSatish Balay Kokkos::parallel_for( 767d326c3f1SJunchao Zhang Kokkos::TeamPolicy<>(PetscGetKokkosExecutionSpace(), m, Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 768076ba34aSJunchao Zhang PetscInt i = t.league_rank(); /* row i */ 769076ba34aSJunchao Zhang PetscInt alen = ai(i + 1) - ai(i), blen = bi(i + 1) - bi(i); 770076ba34aSJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(t, alen + blen), [&](PetscInt k) { 771076ba34aSJunchao Zhang if (k < alen) ca(ci(i) + k) = aa(ai(i) + k); 772076ba34aSJunchao Zhang else ca(ci(i) + k) = ba(bi(i) + k - alen); 773076ba34aSJunchao Zhang }); 774076ba34aSJunchao Zhang }); 7759566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(*C)); 776076ba34aSJunchao Zhang } 7773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 778076ba34aSJunchao Zhang } 779076ba34aSJunchao Zhang 780d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductDataDestroy_SeqAIJKokkos(void *pdata) 781d71ae5a4SJacob Faibussowitsch { 782076ba34aSJunchao Zhang PetscFunctionBegin; 783076ba34aSJunchao Zhang delete static_cast<MatProductData_SeqAIJKokkos *>(pdata); 7843ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 785a3f881fbSStefano Zampini } 786a3f881fbSStefano Zampini 787d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductNumeric_SeqAIJKokkos_SeqAIJKokkos(Mat C) 788d71ae5a4SJacob Faibussowitsch { 789a3f881fbSStefano Zampini Mat_Product *product = C->product; 790a3f881fbSStefano Zampini Mat A, B; 791076ba34aSJunchao Zhang bool transA, transB; /* use bool, since KK needs this type */ 792a3f881fbSStefano Zampini Mat_SeqAIJKokkos *akok, *bkok, *ckok; 793a3f881fbSStefano Zampini Mat_SeqAIJ *c; 794076ba34aSJunchao Zhang MatProductData_SeqAIJKokkos *pdata; 7950e3ece09SJunchao Zhang KokkosCsrMatrix csrmatA, csrmatB; 796a3f881fbSStefano Zampini 797a3f881fbSStefano Zampini PetscFunctionBegin; 798a3f881fbSStefano Zampini MatCheckProduct(C, 1); 7995f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 800076ba34aSJunchao Zhang pdata = static_cast<MatProductData_SeqAIJKokkos *>(C->product->data); 801076ba34aSJunchao Zhang 8020e3ece09SJunchao Zhang // See if numeric has already been done in symbolic (e.g., user calls MatMatMult(A,B,MAT_INITIAL_MATRIX,..,C)). 8030e3ece09SJunchao Zhang // If yes, skip the numeric, but reset the flag so that next time when user calls MatMatMult(E,F,MAT_REUSE_MATRIX,..,C), 8040e3ece09SJunchao Zhang // we still do numeric. 8050e3ece09SJunchao Zhang if (pdata->reusesym) { // numeric reuses results from symbolic 8060e3ece09SJunchao Zhang pdata->reusesym = PETSC_FALSE; 8073ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 808076ba34aSJunchao Zhang } 809076ba34aSJunchao Zhang 810076ba34aSJunchao Zhang switch (product->type) { 8119371c9d4SSatish Balay case MATPRODUCT_AB: 8129371c9d4SSatish Balay transA = false; 8139371c9d4SSatish Balay transB = false; 8149371c9d4SSatish Balay break; 8159371c9d4SSatish Balay case MATPRODUCT_AtB: 8169371c9d4SSatish Balay transA = true; 8179371c9d4SSatish Balay transB = false; 8189371c9d4SSatish Balay break; 8199371c9d4SSatish Balay case MATPRODUCT_ABt: 8209371c9d4SSatish Balay transA = false; 8219371c9d4SSatish Balay transB = true; 8229371c9d4SSatish Balay break; 823d71ae5a4SJacob Faibussowitsch default: 824d71ae5a4SJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Unsupported product type %s", MatProductTypes[product->type]); 825076ba34aSJunchao Zhang } 826076ba34aSJunchao Zhang 827a3f881fbSStefano Zampini A = product->A; 828a3f881fbSStefano Zampini B = product->B; 8299566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 8309566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(B)); 831a3f881fbSStefano Zampini akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 832a3f881fbSStefano Zampini bkok = static_cast<Mat_SeqAIJKokkos *>(B->spptr); 833a3f881fbSStefano Zampini ckok = static_cast<Mat_SeqAIJKokkos *>(C->spptr); 834076ba34aSJunchao Zhang 8355f80ce2aSJacob Faibussowitsch PetscCheck(ckok, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Device data structure spptr is empty"); 836076ba34aSJunchao Zhang 8370e3ece09SJunchao Zhang csrmatA = akok->csrmat; 8380e3ece09SJunchao Zhang csrmatB = bkok->csrmat; 839076ba34aSJunchao Zhang 840076ba34aSJunchao Zhang /* TODO: Once KK spgemm implements transpose, we can get rid of the explicit transpose here */ 841076ba34aSJunchao Zhang if (transA) { 8429566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &csrmatA)); 843076ba34aSJunchao Zhang transA = false; 844a3f881fbSStefano Zampini } 845a3f881fbSStefano Zampini 846076ba34aSJunchao Zhang if (transB) { 8479566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(B, &csrmatB)); 848076ba34aSJunchao Zhang transB = false; 849076ba34aSJunchao Zhang } 8509566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 8510e3ece09SJunchao Zhang PetscCallCXX(KokkosSparse::spgemm_numeric(pdata->kh, csrmatA, transA, csrmatB, transB, ckok->csrmat)); 8520e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_LT(4, 0, 0) 853866eb059SJunchao Zhang auto spgemmHandle = pdata->kh.get_spgemm_handle(); 854866eb059SJunchao Zhang if (spgemmHandle->get_sort_option() != 1) PetscCallCXX(sort_crs_matrix(ckok->csrmat)); /* without sort, mat_tests-ex62_14_seqaijkokkos fails */ 855e944a159SJunchao Zhang #endif 856866eb059SJunchao Zhang 8579566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 8589566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(C)); 859a3f881fbSStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 860a3f881fbSStefano Zampini c = (Mat_SeqAIJ *)C->data; 8619566063dSJacob Faibussowitsch PetscCall(PetscInfo(C, "Matrix size: %" PetscInt_FMT " X %" PetscInt_FMT "; storage space: 0 unneeded,%" PetscInt_FMT " used\n", C->rmap->n, C->cmap->n, c->nz)); 8629566063dSJacob Faibussowitsch PetscCall(PetscInfo(C, "Number of mallocs during MatSetValues() is 0\n")); 8639566063dSJacob Faibussowitsch PetscCall(PetscInfo(C, "Maximum nonzeros in any row is %" PetscInt_FMT "\n", c->rmax)); 864a3f881fbSStefano Zampini c->reallocs = 0; 865076ba34aSJunchao Zhang C->info.mallocs = 0; 866a3f881fbSStefano Zampini C->info.nz_unneeded = 0; 867a3f881fbSStefano Zampini C->assembled = C->was_assembled = PETSC_TRUE; 868a3f881fbSStefano Zampini C->num_ass++; 8693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 870a3f881fbSStefano Zampini } 871a3f881fbSStefano Zampini 872d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSymbolic_SeqAIJKokkos_SeqAIJKokkos(Mat C) 873d71ae5a4SJacob Faibussowitsch { 874076ba34aSJunchao Zhang Mat_Product *product = C->product; 875076ba34aSJunchao Zhang MatProductType ptype; 876076ba34aSJunchao Zhang Mat A, B; 877076ba34aSJunchao Zhang bool transA, transB; 878076ba34aSJunchao Zhang Mat_SeqAIJKokkos *akok, *bkok, *ckok; 879076ba34aSJunchao Zhang MatProductData_SeqAIJKokkos *pdata; 880076ba34aSJunchao Zhang MPI_Comm comm; 8810e3ece09SJunchao Zhang KokkosCsrMatrix csrmatA, csrmatB, csrmatC; 882a3f881fbSStefano Zampini 883a3f881fbSStefano Zampini PetscFunctionBegin; 884a3f881fbSStefano Zampini MatCheckProduct(C, 1); 8859566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 8865f80ce2aSJacob Faibussowitsch PetscCheck(!product->data, comm, PETSC_ERR_PLIB, "Product data not empty"); 887a3f881fbSStefano Zampini A = product->A; 888a3f881fbSStefano Zampini B = product->B; 8899566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 8909566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(B)); 891a3f881fbSStefano Zampini akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 892a3f881fbSStefano Zampini bkok = static_cast<Mat_SeqAIJKokkos *>(B->spptr); 8930e3ece09SJunchao Zhang csrmatA = akok->csrmat; 8940e3ece09SJunchao Zhang csrmatB = bkok->csrmat; 895076ba34aSJunchao Zhang 896a3f881fbSStefano Zampini ptype = product->type; 8970e3ece09SJunchao Zhang // Take advantage of the symmetry if true 8980e3ece09SJunchao Zhang if (A->symmetric == PETSC_BOOL3_TRUE && ptype == MATPRODUCT_AtB) { 8990e3ece09SJunchao Zhang ptype = MATPRODUCT_AB; 9000e3ece09SJunchao Zhang product->symbolic_used_the_fact_A_is_symmetric = PETSC_TRUE; 9010e3ece09SJunchao Zhang } 9020e3ece09SJunchao Zhang if (B->symmetric == PETSC_BOOL3_TRUE && ptype == MATPRODUCT_ABt) { 9030e3ece09SJunchao Zhang ptype = MATPRODUCT_AB; 9040e3ece09SJunchao Zhang product->symbolic_used_the_fact_B_is_symmetric = PETSC_TRUE; 9050e3ece09SJunchao Zhang } 9060e3ece09SJunchao Zhang 907a3f881fbSStefano Zampini switch (ptype) { 9089371c9d4SSatish Balay case MATPRODUCT_AB: 9099371c9d4SSatish Balay transA = false; 9109371c9d4SSatish Balay transB = false; 9110e6a1e94SMark Adams PetscCall(MatSetBlockSizesFromMats(C, A, B)); 9129371c9d4SSatish Balay break; 9139371c9d4SSatish Balay case MATPRODUCT_AtB: 9149371c9d4SSatish Balay transA = true; 9159371c9d4SSatish Balay transB = false; 9160e6a1e94SMark Adams if (A->cmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(C->rmap, A->cmap->bs)); 9170e6a1e94SMark Adams if (B->cmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(C->cmap, B->cmap->bs)); 9189371c9d4SSatish Balay break; 9199371c9d4SSatish Balay case MATPRODUCT_ABt: 9209371c9d4SSatish Balay transA = false; 9219371c9d4SSatish Balay transB = true; 9220e6a1e94SMark Adams if (A->rmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(C->rmap, A->rmap->bs)); 9230e6a1e94SMark Adams if (B->rmap->bs > 0) PetscCall(PetscLayoutSetBlockSize(C->cmap, B->rmap->bs)); 9249371c9d4SSatish Balay break; 925d71ae5a4SJacob Faibussowitsch default: 926d71ae5a4SJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_PLIB, "Unsupported product type %s", MatProductTypes[product->type]); 927a3f881fbSStefano Zampini } 9280e3ece09SJunchao Zhang PetscCallCXX(product->data = pdata = new MatProductData_SeqAIJKokkos()); 929076ba34aSJunchao Zhang pdata->reusesym = product->api_user; 930a3f881fbSStefano Zampini 931076ba34aSJunchao Zhang /* TODO: add command line options to select spgemm algorithms */ 932866eb059SJunchao Zhang auto spgemm_alg = KokkosSparse::SPGEMMAlgorithm::SPGEMM_DEFAULT; /* default alg is TPL if enabled, otherwise KK */ 933866eb059SJunchao Zhang 934866eb059SJunchao Zhang /* CUDA-10.2's spgemm has bugs. We prefer the SpGEMMreuse APIs introduced in cuda-11.4 */ 935866eb059SJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE) 936866eb059SJunchao Zhang #if PETSC_PKG_CUDA_VERSION_LT(11, 4, 0) 937866eb059SJunchao Zhang spgemm_alg = KokkosSparse::SPGEMMAlgorithm::SPGEMM_KK; 938866eb059SJunchao Zhang #endif 939866eb059SJunchao Zhang #endif 9400e3ece09SJunchao Zhang PetscCallCXX(pdata->kh.create_spgemm_handle(spgemm_alg)); 941076ba34aSJunchao Zhang 9429566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 943076ba34aSJunchao Zhang /* TODO: Get rid of the explicit transpose once KK-spgemm implements the transpose option */ 944076ba34aSJunchao Zhang if (transA) { 9459566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A, &csrmatA)); 946076ba34aSJunchao Zhang transA = false; 947076ba34aSJunchao Zhang } 948076ba34aSJunchao Zhang 949076ba34aSJunchao Zhang if (transB) { 9509566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(B, &csrmatB)); 951076ba34aSJunchao Zhang transB = false; 952076ba34aSJunchao Zhang } 953076ba34aSJunchao Zhang 9540e3ece09SJunchao Zhang PetscCallCXX(KokkosSparse::spgemm_symbolic(pdata->kh, csrmatA, transA, csrmatB, transB, csrmatC)); 955076ba34aSJunchao Zhang /* spgemm_symbolic() only populates C's rowmap, but not C's column indices. 956076ba34aSJunchao Zhang So we have to do a fake spgemm_numeric() here to get csrmatC.j_d setup, before 957076ba34aSJunchao Zhang calling new Mat_SeqAIJKokkos(). 958076ba34aSJunchao Zhang TODO: Remove the fake spgemm_numeric() after KK fixed this problem. 959076ba34aSJunchao Zhang */ 9600e3ece09SJunchao Zhang PetscCallCXX(KokkosSparse::spgemm_numeric(pdata->kh, csrmatA, transA, csrmatB, transB, csrmatC)); 9610e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_KERNELS_VERSION_LT(4, 0, 0) 962866eb059SJunchao Zhang /* Query if KK outputs a sorted matrix. If not, we need to sort it */ 963866eb059SJunchao Zhang auto spgemmHandle = pdata->kh.get_spgemm_handle(); 964866eb059SJunchao Zhang if (spgemmHandle->get_sort_option() != 1) PetscCallCXX(sort_crs_matrix(csrmatC)); /* sort_option defaults to -1 in KK!*/ 965e944a159SJunchao Zhang #endif 9669566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 967076ba34aSJunchao Zhang 9689566063dSJacob Faibussowitsch PetscCallCXX(ckok = new Mat_SeqAIJKokkos(csrmatC)); 9699566063dSJacob Faibussowitsch PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(C, ckok)); 970076ba34aSJunchao Zhang C->product->destroy = MatProductDataDestroy_SeqAIJKokkos; 9713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 972a3f881fbSStefano Zampini } 973a3f881fbSStefano Zampini 974a3f881fbSStefano Zampini /* handles sparse matrix matrix ops */ 975d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_SeqAIJKokkos(Mat mat) 976d71ae5a4SJacob Faibussowitsch { 977076ba34aSJunchao Zhang Mat_Product *product = mat->product; 978a3f881fbSStefano Zampini PetscBool Biskok = PETSC_FALSE, Ciskok = PETSC_TRUE; 979a3f881fbSStefano Zampini 980a3f881fbSStefano Zampini PetscFunctionBegin; 981a3f881fbSStefano Zampini MatCheckProduct(mat, 1); 9829566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)product->B, MATSEQAIJKOKKOS, &Biskok)); 98348a46eb9SPierre Jolivet if (product->type == MATPRODUCT_ABC) PetscCall(PetscObjectTypeCompare((PetscObject)product->C, MATSEQAIJKOKKOS, &Ciskok)); 984a3f881fbSStefano Zampini if (Biskok && Ciskok) { 985a3f881fbSStefano Zampini switch (product->type) { 986a3f881fbSStefano Zampini case MATPRODUCT_AB: 987a3f881fbSStefano Zampini case MATPRODUCT_AtB: 988d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABt: 989d71ae5a4SJacob Faibussowitsch mat->ops->productsymbolic = MatProductSymbolic_SeqAIJKokkos_SeqAIJKokkos; 990d71ae5a4SJacob Faibussowitsch break; 991a3f881fbSStefano Zampini case MATPRODUCT_PtAP: 992a3f881fbSStefano Zampini case MATPRODUCT_RARt: 993d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABC: 994d71ae5a4SJacob Faibussowitsch mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 995d71ae5a4SJacob Faibussowitsch break; 996d71ae5a4SJacob Faibussowitsch default: 997d71ae5a4SJacob Faibussowitsch break; 998a3f881fbSStefano Zampini } 999a3f881fbSStefano Zampini } else { /* fallback for AIJ */ 10009566063dSJacob Faibussowitsch PetscCall(MatProductSetFromOptions_SeqAIJ(mat)); 1001a3f881fbSStefano Zampini } 10023ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1003a3f881fbSStefano Zampini } 1004a587d139SMark 1005d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatScale_SeqAIJKokkos(Mat A, PetscScalar a) 1006d71ae5a4SJacob Faibussowitsch { 1007f0cf5187SStefano Zampini Mat_SeqAIJKokkos *aijkok; 1008f0cf5187SStefano Zampini 1009f0cf5187SStefano Zampini PetscFunctionBegin; 10109566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 10119566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 1012f0cf5187SStefano Zampini aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1013d326c3f1SJunchao Zhang KokkosBlas::scal(PetscGetKokkosExecutionSpace(), aijkok->a_dual.view_device(), a, aijkok->a_dual.view_device()); 10149566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(A)); 10159566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(aijkok->a_dual.extent(0))); 10169566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 10173ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1018f0cf5187SStefano Zampini } 1019f0cf5187SStefano Zampini 1020f4747e26SJunchao Zhang // add a to A's diagonal (if A is square) or main diagonal (if A is rectangular) 1021f4747e26SJunchao Zhang static PetscErrorCode MatShift_SeqAIJKokkos(Mat A, PetscScalar a) 1022f4747e26SJunchao Zhang { 1023f4747e26SJunchao Zhang Mat_SeqAIJ *aijseq = static_cast<Mat_SeqAIJ *>(A->data); 1024f4747e26SJunchao Zhang 1025f4747e26SJunchao Zhang PetscFunctionBegin; 1026f4747e26SJunchao Zhang if (A->assembled && aijseq->diagonaldense) { // no missing diagonals 1027f4747e26SJunchao Zhang PetscInt n = PetscMin(A->rmap->n, A->cmap->n); 1028f4747e26SJunchao Zhang 1029f4747e26SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 1030f4747e26SJunchao Zhang PetscCall(MatSeqAIJKokkosSyncDevice(A)); 1031f4747e26SJunchao Zhang const auto aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1032f4747e26SJunchao Zhang const auto &Aa = aijkok->a_dual.view_device(); 1033f4747e26SJunchao Zhang const auto &Adiag = aijkok->diag_dual.view_device(); 1034d326c3f1SJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, n), KOKKOS_LAMBDA(const PetscInt i) { Aa(Adiag(i)) += a; })); 1035f4747e26SJunchao Zhang PetscCall(MatSeqAIJKokkosModifyDevice(A)); 1036f4747e26SJunchao Zhang PetscCall(PetscLogGpuFlops(n)); 1037f4747e26SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1038f4747e26SJunchao Zhang } else { // need reassembly, very slow! 1039f4747e26SJunchao Zhang PetscCall(MatShift_Basic(A, a)); 1040f4747e26SJunchao Zhang } 1041f4747e26SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 1042f4747e26SJunchao Zhang } 1043f4747e26SJunchao Zhang 1044f4747e26SJunchao Zhang static PetscErrorCode MatDiagonalSet_SeqAIJKokkos(Mat Y, Vec D, InsertMode is) 1045f4747e26SJunchao Zhang { 1046f4747e26SJunchao Zhang Mat_SeqAIJ *aijseq = static_cast<Mat_SeqAIJ *>(Y->data); 1047f4747e26SJunchao Zhang 1048f4747e26SJunchao Zhang PetscFunctionBegin; 1049f4747e26SJunchao Zhang if (Y->assembled && aijseq->diagonaldense) { // no missing diagonals 1050f4747e26SJunchao Zhang ConstPetscScalarKokkosView dv; 1051f4747e26SJunchao Zhang PetscInt n, nv; 1052f4747e26SJunchao Zhang 1053f4747e26SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 1054f4747e26SJunchao Zhang PetscCall(MatSeqAIJKokkosSyncDevice(Y)); 1055f4747e26SJunchao Zhang PetscCall(VecGetKokkosView(D, &dv)); 1056f4747e26SJunchao Zhang PetscCall(VecGetLocalSize(D, &nv)); 1057f4747e26SJunchao Zhang n = PetscMin(Y->rmap->n, Y->cmap->n); 1058f4747e26SJunchao Zhang PetscCheck(n == nv, PetscObjectComm((PetscObject)Y), PETSC_ERR_ARG_SIZ, "Matrix size and vector size do not match"); 1059f4747e26SJunchao Zhang 1060f4747e26SJunchao Zhang const auto aijkok = static_cast<Mat_SeqAIJKokkos *>(Y->spptr); 1061f4747e26SJunchao Zhang const auto &Aa = aijkok->a_dual.view_device(); 1062f4747e26SJunchao Zhang const auto &Adiag = aijkok->diag_dual.view_device(); 1063f4747e26SJunchao Zhang PetscCallCXX(Kokkos::parallel_for( 1064d326c3f1SJunchao Zhang Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, n), KOKKOS_LAMBDA(const PetscInt i) { 1065f4747e26SJunchao Zhang if (is == INSERT_VALUES) Aa(Adiag(i)) = dv(i); 1066f4747e26SJunchao Zhang else Aa(Adiag(i)) += dv(i); 1067f4747e26SJunchao Zhang })); 1068f4747e26SJunchao Zhang PetscCall(VecRestoreKokkosView(D, &dv)); 1069f4747e26SJunchao Zhang PetscCall(MatSeqAIJKokkosModifyDevice(Y)); 1070f4747e26SJunchao Zhang PetscCall(PetscLogGpuFlops(n)); 1071f4747e26SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1072f4747e26SJunchao Zhang } else { // need reassembly, very slow! 1073f4747e26SJunchao Zhang PetscCall(MatDiagonalSet_Default(Y, D, is)); 1074f4747e26SJunchao Zhang } 1075f4747e26SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 1076f4747e26SJunchao Zhang } 1077f4747e26SJunchao Zhang 1078f4747e26SJunchao Zhang static PetscErrorCode MatDiagonalScale_SeqAIJKokkos(Mat A, Vec ll, Vec rr) 1079f4747e26SJunchao Zhang { 1080f4747e26SJunchao Zhang Mat_SeqAIJ *aijseq = static_cast<Mat_SeqAIJ *>(A->data); 1081f4747e26SJunchao Zhang PetscInt m = A->rmap->n, n = A->cmap->n, nz = aijseq->nz; 1082f4747e26SJunchao Zhang ConstPetscScalarKokkosView lv, rv; 1083f4747e26SJunchao Zhang 1084f4747e26SJunchao Zhang PetscFunctionBegin; 1085f4747e26SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 1086f4747e26SJunchao Zhang PetscCall(MatSeqAIJKokkosSyncDevice(A)); 1087f4747e26SJunchao Zhang const auto aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1088f4747e26SJunchao Zhang const auto &Aa = aijkok->a_dual.view_device(); 1089f4747e26SJunchao Zhang const auto &Ai = aijkok->i_dual.view_device(); 1090f4747e26SJunchao Zhang const auto &Aj = aijkok->j_dual.view_device(); 1091f4747e26SJunchao Zhang if (ll) { 1092f4747e26SJunchao Zhang PetscCall(VecGetLocalSize(ll, &m)); 1093f4747e26SJunchao Zhang PetscCheck(m == A->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector wrong length"); 1094f4747e26SJunchao Zhang PetscCall(VecGetKokkosView(ll, &lv)); 1095f4747e26SJunchao Zhang PetscCallCXX(Kokkos::parallel_for( // for each row 1096d326c3f1SJunchao Zhang Kokkos::TeamPolicy<>(PetscGetKokkosExecutionSpace(), m, Kokkos::AUTO()), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 1097f4747e26SJunchao Zhang PetscInt i = t.league_rank(); // row i 1098f4747e26SJunchao Zhang PetscInt len = Ai(i + 1) - Ai(i); 1099f4747e26SJunchao Zhang // scale entries on the row 1100f4747e26SJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(t, len), [&](PetscInt j) { Aa(Ai(i) + j) *= lv(i); }); 1101f4747e26SJunchao Zhang })); 1102f4747e26SJunchao Zhang PetscCall(VecRestoreKokkosView(ll, &lv)); 1103f4747e26SJunchao Zhang PetscCall(PetscLogGpuFlops(nz)); 1104f4747e26SJunchao Zhang } 1105f4747e26SJunchao Zhang if (rr) { 1106f4747e26SJunchao Zhang PetscCall(VecGetLocalSize(rr, &n)); 1107f4747e26SJunchao Zhang PetscCheck(n == A->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vector wrong length"); 1108f4747e26SJunchao Zhang PetscCall(VecGetKokkosView(rr, &rv)); 1109f4747e26SJunchao Zhang PetscCallCXX(Kokkos::parallel_for( // for each nonzero 1110d326c3f1SJunchao Zhang Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, nz), KOKKOS_LAMBDA(const PetscInt k) { Aa(k) *= rv(Aj(k)); })); 1111f4747e26SJunchao Zhang PetscCall(VecRestoreKokkosView(rr, &lv)); 1112f4747e26SJunchao Zhang PetscCall(PetscLogGpuFlops(nz)); 1113f4747e26SJunchao Zhang } 1114f4747e26SJunchao Zhang PetscCall(MatSeqAIJKokkosModifyDevice(A)); 1115f4747e26SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1116f4747e26SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 1117f4747e26SJunchao Zhang } 1118f4747e26SJunchao Zhang 1119d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatZeroEntries_SeqAIJKokkos(Mat A) 1120d71ae5a4SJacob Faibussowitsch { 1121076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 1122a587d139SMark 1123a587d139SMark PetscFunctionBegin; 1124076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 11252328674fSJunchao Zhang if (aijkok) { /* Only zero the device if data is already there */ 1126d326c3f1SJunchao Zhang KokkosBlas::fill(PetscGetKokkosExecutionSpace(), aijkok->a_dual.view_device(), 0.0); 11279566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(A)); 11282328674fSJunchao Zhang } else { /* Might be preallocated but not assembled */ 11299566063dSJacob Faibussowitsch PetscCall(MatZeroEntries_SeqAIJ(A)); 11302328674fSJunchao Zhang } 11313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1132a587d139SMark } 1133a587d139SMark 1134d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetDiagonal_SeqAIJKokkos(Mat A, Vec x) 1135d71ae5a4SJacob Faibussowitsch { 1136f78ce678SMark Adams Mat_SeqAIJKokkos *aijkok; 1137f78ce678SMark Adams PetscInt n; 1138f78ce678SMark Adams PetscScalarKokkosView xv; 1139f78ce678SMark Adams 1140f78ce678SMark Adams PetscFunctionBegin; 1141f78ce678SMark Adams PetscCall(VecGetLocalSize(x, &n)); 1142f78ce678SMark Adams PetscCheck(n == A->rmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming matrix and vector"); 1143f78ce678SMark Adams PetscCheck(A->factortype == MAT_FACTOR_NONE, PETSC_COMM_SELF, PETSC_ERR_SUP, "MatGetDiagonal_SeqAIJKokkos not supported on factored matrices"); 1144f78ce678SMark Adams 1145f78ce678SMark Adams PetscCall(MatSeqAIJKokkosSyncDevice(A)); 1146f78ce678SMark Adams aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1147f78ce678SMark Adams 1148f78ce678SMark Adams const auto &Aa = aijkok->a_dual.view_device(); 1149f78ce678SMark Adams const auto &Ai = aijkok->i_dual.view_device(); 1150f78ce678SMark Adams const auto &Adiag = aijkok->diag_dual.view_device(); 1151f78ce678SMark Adams 1152f78ce678SMark Adams PetscCall(VecGetKokkosViewWrite(x, &xv)); 11539371c9d4SSatish Balay Kokkos::parallel_for( 1154d326c3f1SJunchao Zhang Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, n), KOKKOS_LAMBDA(const PetscInt i) { 1155f78ce678SMark Adams if (Adiag(i) < Ai(i + 1)) xv(i) = Aa(Adiag(i)); 1156f78ce678SMark Adams else xv(i) = 0; 1157f78ce678SMark Adams }); 1158f78ce678SMark Adams PetscCall(VecRestoreKokkosViewWrite(x, &xv)); 11593ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1160f78ce678SMark Adams } 1161f78ce678SMark Adams 1162db78de30SJunchao Zhang /* Get a Kokkos View from a mat of type MatSeqAIJKokkos */ 1163d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJGetKokkosView(Mat A, ConstMatScalarKokkosView *kv) 1164d71ae5a4SJacob Faibussowitsch { 1165db78de30SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 1166db78de30SJunchao Zhang 1167db78de30SJunchao Zhang PetscFunctionBegin; 1168db78de30SJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 11694f572ea9SToby Isaac PetscAssertPointer(kv, 2); 1170db78de30SJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 11719566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 1172db78de30SJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1173076ba34aSJunchao Zhang *kv = aijkok->a_dual.view_device(); 11743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1175db78de30SJunchao Zhang } 1176db78de30SJunchao Zhang 1177d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJRestoreKokkosView(Mat A, ConstMatScalarKokkosView *kv) 1178d71ae5a4SJacob Faibussowitsch { 1179db78de30SJunchao Zhang PetscFunctionBegin; 1180db78de30SJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 11814f572ea9SToby Isaac PetscAssertPointer(kv, 2); 1182db78de30SJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 11833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1184db78de30SJunchao Zhang } 1185db78de30SJunchao Zhang 1186d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJGetKokkosView(Mat A, MatScalarKokkosView *kv) 1187d71ae5a4SJacob Faibussowitsch { 1188db78de30SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 1189db78de30SJunchao Zhang 1190db78de30SJunchao Zhang PetscFunctionBegin; 1191db78de30SJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 11924f572ea9SToby Isaac PetscAssertPointer(kv, 2); 1193db78de30SJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 11949566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 1195db78de30SJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1196076ba34aSJunchao Zhang *kv = aijkok->a_dual.view_device(); 11973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1198db78de30SJunchao Zhang } 1199db78de30SJunchao Zhang 1200d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJRestoreKokkosView(Mat A, MatScalarKokkosView *kv) 1201d71ae5a4SJacob Faibussowitsch { 1202db78de30SJunchao Zhang PetscFunctionBegin; 1203db78de30SJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 12044f572ea9SToby Isaac PetscAssertPointer(kv, 2); 1205db78de30SJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 12069566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(A)); 12073ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1208db78de30SJunchao Zhang } 1209db78de30SJunchao Zhang 1210d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJGetKokkosViewWrite(Mat A, MatScalarKokkosView *kv) 1211d71ae5a4SJacob Faibussowitsch { 1212db78de30SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 1213db78de30SJunchao Zhang 1214db78de30SJunchao Zhang PetscFunctionBegin; 1215db78de30SJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 12164f572ea9SToby Isaac PetscAssertPointer(kv, 2); 1217db78de30SJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 1218db78de30SJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 1219076ba34aSJunchao Zhang *kv = aijkok->a_dual.view_device(); 12203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1221db78de30SJunchao Zhang } 1222db78de30SJunchao Zhang 1223d71ae5a4SJacob Faibussowitsch PetscErrorCode MatSeqAIJRestoreKokkosViewWrite(Mat A, MatScalarKokkosView *kv) 1224d71ae5a4SJacob Faibussowitsch { 1225db78de30SJunchao Zhang PetscFunctionBegin; 1226db78de30SJunchao Zhang PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 12274f572ea9SToby Isaac PetscAssertPointer(kv, 2); 1228db78de30SJunchao Zhang PetscCheckTypeName(A, MATSEQAIJKOKKOS); 12299566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(A)); 12303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1231db78de30SJunchao Zhang } 1232db78de30SJunchao Zhang 1233c0c276a7Ssdargavi PetscErrorCode MatCreateSeqAIJKokkosWithKokkosViews(MPI_Comm comm, PetscInt m, PetscInt n, Kokkos::View<PetscInt *> &i_d, Kokkos::View<PetscInt *> &j_d, Kokkos::View<PetscScalar *> &a_d, Mat *A) 1234c0c276a7Ssdargavi { 1235c0c276a7Ssdargavi Mat_SeqAIJKokkos *akok; 1236c0c276a7Ssdargavi 1237c0c276a7Ssdargavi PetscFunctionBegin; 1238c0c276a7Ssdargavi auto exec = PetscGetKokkosExecutionSpace(); 1239c0c276a7Ssdargavi // Create host copies of the input aij 1240c0c276a7Ssdargavi auto i_h = Kokkos::create_mirror_view_and_copy(HostMirrorMemorySpace(), i_d); 1241c0c276a7Ssdargavi auto j_h = Kokkos::create_mirror_view_and_copy(HostMirrorMemorySpace(), j_d); 1242c0c276a7Ssdargavi // Don't copy the vals to the host now 1243c0c276a7Ssdargavi auto a_h = Kokkos::create_mirror_view(HostMirrorMemorySpace(), a_d); 1244c0c276a7Ssdargavi 1245c0c276a7Ssdargavi MatScalarKokkosDualView a_dual = MatScalarKokkosDualView(a_d, a_h); 1246c0c276a7Ssdargavi // Note we have modified device data so it will copy lazily 1247c0c276a7Ssdargavi a_dual.modify_device(); 1248c0c276a7Ssdargavi MatRowMapKokkosDualView i_dual = MatRowMapKokkosDualView(i_d, i_h); 1249c0c276a7Ssdargavi MatColIdxKokkosDualView j_dual = MatColIdxKokkosDualView(j_d, j_h); 1250c0c276a7Ssdargavi 1251c0c276a7Ssdargavi PetscCallCXX(akok = new Mat_SeqAIJKokkos(m, n, j_dual.extent(0), i_dual, j_dual, a_dual)); 1252c0c276a7Ssdargavi PetscCall(MatCreate(comm, A)); 1253c0c276a7Ssdargavi PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(*A, akok)); 1254c0c276a7Ssdargavi PetscFunctionReturn(PETSC_SUCCESS); 1255c0c276a7Ssdargavi } 1256c0c276a7Ssdargavi 1257c17cf699SJunchao Zhang /* Computes Y += alpha X */ 1258d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatAXPY_SeqAIJKokkos(Mat Y, PetscScalar alpha, Mat X, MatStructure pattern) 1259d71ae5a4SJacob Faibussowitsch { 1260a587d139SMark Mat_SeqAIJ *x = (Mat_SeqAIJ *)X->data, *y = (Mat_SeqAIJ *)Y->data; 1261c17cf699SJunchao Zhang Mat_SeqAIJKokkos *xkok, *ykok, *zkok; 1262c17cf699SJunchao Zhang ConstMatScalarKokkosView Xa; 1263c17cf699SJunchao Zhang MatScalarKokkosView Ya; 12644df4a32cSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 1265a587d139SMark 1266a587d139SMark PetscFunctionBegin; 1267c17cf699SJunchao Zhang PetscCheckTypeName(Y, MATSEQAIJKOKKOS); 1268c17cf699SJunchao Zhang PetscCheckTypeName(X, MATSEQAIJKOKKOS); 12699566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(Y)); 12709566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(X)); 12719566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1272db78de30SJunchao Zhang 1273c17cf699SJunchao Zhang if (pattern != SAME_NONZERO_PATTERN && x->nz == y->nz) { 1274a587d139SMark PetscBool e; 12759566063dSJacob Faibussowitsch PetscCall(PetscArraycmp(x->i, y->i, Y->rmap->n + 1, &e)); 1276a587d139SMark if (e) { 12779566063dSJacob Faibussowitsch PetscCall(PetscArraycmp(x->j, y->j, y->nz, &e)); 1278c17cf699SJunchao Zhang if (e) pattern = SAME_NONZERO_PATTERN; 1279a587d139SMark } 1280a587d139SMark } 1281db78de30SJunchao Zhang 1282c17cf699SJunchao Zhang /* cusparseDcsrgeam2() computes C = alpha A + beta B. If one knew sparsity pattern of C, one can skip 1283c17cf699SJunchao Zhang cusparseScsrgeam2_bufferSizeExt() / cusparseXcsrgeam2Nnz(), and directly call cusparseScsrgeam2(). 1284c17cf699SJunchao Zhang If X is SUBSET_NONZERO_PATTERN of Y, we could take advantage of this cusparse feature. However, 1285c17cf699SJunchao Zhang KokkosSparse::spadd(alpha,A,beta,B,C) has symbolic and numeric phases, MatAXPY does not. 1286c17cf699SJunchao Zhang */ 1287c17cf699SJunchao Zhang ykok = static_cast<Mat_SeqAIJKokkos *>(Y->spptr); 1288c17cf699SJunchao Zhang xkok = static_cast<Mat_SeqAIJKokkos *>(X->spptr); 1289c17cf699SJunchao Zhang Xa = xkok->a_dual.view_device(); 1290c17cf699SJunchao Zhang Ya = ykok->a_dual.view_device(); 1291c17cf699SJunchao Zhang 1292c17cf699SJunchao Zhang if (pattern == SAME_NONZERO_PATTERN) { 1293d326c3f1SJunchao Zhang KokkosBlas::axpy(exec, alpha, Xa, Ya); 12949566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(Y)); 1295c17cf699SJunchao Zhang } else if (pattern == SUBSET_NONZERO_PATTERN) { 1296c17cf699SJunchao Zhang MatRowMapKokkosView Xi = xkok->i_dual.view_device(), Yi = ykok->i_dual.view_device(); 1297c17cf699SJunchao Zhang MatColIdxKokkosView Xj = xkok->j_dual.view_device(), Yj = ykok->j_dual.view_device(); 1298c17cf699SJunchao Zhang 12999371c9d4SSatish Balay Kokkos::parallel_for( 1300d326c3f1SJunchao Zhang Kokkos::TeamPolicy<>(exec, Y->rmap->n, 1), KOKKOS_LAMBDA(const KokkosTeamMemberType &t) { 13010e3ece09SJunchao Zhang PetscInt i = t.league_rank(); // row i 13020e3ece09SJunchao Zhang Kokkos::single(Kokkos::PerTeam(t), [=]() { 13030e3ece09SJunchao Zhang // Only one thread works in a team 1304c17cf699SJunchao Zhang PetscInt p, q = Yi(i); 13050e3ece09SJunchao Zhang for (p = Xi(i); p < Xi(i + 1); p++) { // For each nonzero on row i of X, 13060e3ece09SJunchao Zhang while (Xj(p) != Yj(q) && q < Yi(i + 1)) q++; // find the matching nonzero on row i of Y. 13070e3ece09SJunchao Zhang if (Xj(p) == Yj(q)) { // Found it 1308c17cf699SJunchao Zhang Ya(q) += alpha * Xa(p); 1309c17cf699SJunchao Zhang q++; 1310a587d139SMark } else { 13110e3ece09SJunchao Zhang // If not found, it indicates the input is wrong (X is not a SUBSET_NONZERO_PATTERN of Y). 13120e3ece09SJunchao Zhang // Just insert a NaN at the beginning of row i if it is not empty, to make the result wrong. 13130e3ece09SJunchao Zhang #if PETSC_PKG_KOKKOS_VERSION_GE(3, 7, 0) 13140e3ece09SJunchao Zhang if (Yi(i) != Yi(i + 1)) Ya(Yi(i)) = Kokkos::ArithTraits<PetscScalar>::nan(); 13158b8b16f9SJunchao Zhang #else 13160e3ece09SJunchao Zhang if (Yi(i) != Yi(i + 1)) Ya(Yi(i)) = Kokkos::Experimental::nan("1"); 13178b8b16f9SJunchao Zhang #endif 1318a587d139SMark } 1319c17cf699SJunchao Zhang } 1320c17cf699SJunchao Zhang }); 1321c17cf699SJunchao Zhang }); 13229566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(Y)); 13230e3ece09SJunchao Zhang } else { // different nonzero patterns 1324c17cf699SJunchao Zhang Mat Z; 1325c17cf699SJunchao Zhang KokkosCsrMatrix zcsr; 1326c17cf699SJunchao Zhang KernelHandle kh; 13270e3ece09SJunchao Zhang kh.create_spadd_handle(true); // X, Y are sorted 1328c17cf699SJunchao Zhang KokkosSparse::spadd_symbolic(&kh, xkok->csrmat, ykok->csrmat, zcsr); 1329c17cf699SJunchao Zhang KokkosSparse::spadd_numeric(&kh, alpha, xkok->csrmat, (PetscScalar)1.0, ykok->csrmat, zcsr); 1330c17cf699SJunchao Zhang zkok = new Mat_SeqAIJKokkos(zcsr); 13319566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF, zkok, &Z)); 13329566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(Y, &Z)); 1333c17cf699SJunchao Zhang kh.destroy_spadd_handle(); 1334c17cf699SJunchao Zhang } 13359566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 13360e3ece09SJunchao Zhang PetscCall(PetscLogGpuFlops(xkok->a_dual.extent(0) * 2)); // Because we scaled X and then added it to Y 13373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1338a587d139SMark } 1339a587d139SMark 13402c4ab24aSJunchao Zhang struct MatCOOStruct_SeqAIJKokkos { 13412c4ab24aSJunchao Zhang PetscCount n; 13422c4ab24aSJunchao Zhang PetscCount Atot; 13432c4ab24aSJunchao Zhang PetscInt nz; 13442c4ab24aSJunchao Zhang PetscCountKokkosView jmap; 13452c4ab24aSJunchao Zhang PetscCountKokkosView perm; 13462c4ab24aSJunchao Zhang 13472c4ab24aSJunchao Zhang MatCOOStruct_SeqAIJKokkos(const MatCOOStruct_SeqAIJ *coo_h) 13482c4ab24aSJunchao Zhang { 13492c4ab24aSJunchao Zhang nz = coo_h->nz; 13502c4ab24aSJunchao Zhang n = coo_h->n; 13512c4ab24aSJunchao Zhang Atot = coo_h->Atot; 13522c4ab24aSJunchao Zhang jmap = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), PetscCountKokkosViewHost(coo_h->jmap, nz + 1)); 13532c4ab24aSJunchao Zhang perm = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), PetscCountKokkosViewHost(coo_h->perm, Atot)); 13542c4ab24aSJunchao Zhang } 13552c4ab24aSJunchao Zhang }; 13562c4ab24aSJunchao Zhang 135749abdd8aSBarry Smith static PetscErrorCode MatCOOStructDestroy_SeqAIJKokkos(void **data) 13582c4ab24aSJunchao Zhang { 13592c4ab24aSJunchao Zhang PetscFunctionBegin; 136049abdd8aSBarry Smith PetscCallCXX(delete static_cast<MatCOOStruct_SeqAIJKokkos *>(*data)); 13612c4ab24aSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 13622c4ab24aSJunchao Zhang } 13632c4ab24aSJunchao Zhang 1364d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetPreallocationCOO_SeqAIJKokkos(Mat mat, PetscCount coo_n, PetscInt coo_i[], PetscInt coo_j[]) 1365d71ae5a4SJacob Faibussowitsch { 136642550becSJunchao Zhang Mat_SeqAIJKokkos *akok; 136742550becSJunchao Zhang Mat_SeqAIJ *aseq; 136803e76207SPierre Jolivet PetscContainer container_h; 13692c4ab24aSJunchao Zhang MatCOOStruct_SeqAIJ *coo_h; 13702c4ab24aSJunchao Zhang MatCOOStruct_SeqAIJKokkos *coo_d; 137142550becSJunchao Zhang 137242550becSJunchao Zhang PetscFunctionBegin; 13739566063dSJacob Faibussowitsch PetscCall(MatSetPreallocationCOO_SeqAIJ(mat, coo_n, coo_i, coo_j)); 1374394ed5ebSJunchao Zhang aseq = static_cast<Mat_SeqAIJ *>(mat->data); 137542550becSJunchao Zhang akok = static_cast<Mat_SeqAIJKokkos *>(mat->spptr); 1376cbc6b225SStefano Zampini delete akok; 1377f4747e26SJunchao Zhang mat->spptr = akok = new Mat_SeqAIJKokkos(mat->rmap->n, mat->cmap->n, aseq, mat->nonzerostate + 1, PETSC_FALSE); 13789566063dSJacob Faibussowitsch PetscCall(MatZeroEntries_SeqAIJKokkos(mat)); 13792c4ab24aSJunchao Zhang 13802c4ab24aSJunchao Zhang // Copy the COO struct to device 13812c4ab24aSJunchao Zhang PetscCall(PetscObjectQuery((PetscObject)mat, "__PETSc_MatCOOStruct_Host", (PetscObject *)&container_h)); 13822c4ab24aSJunchao Zhang PetscCall(PetscContainerGetPointer(container_h, (void **)&coo_h)); 13832c4ab24aSJunchao Zhang PetscCallCXX(coo_d = new MatCOOStruct_SeqAIJKokkos(coo_h)); 13842c4ab24aSJunchao Zhang 13852c4ab24aSJunchao Zhang // Put the COO struct in a container and then attach that to the matrix 138603e76207SPierre Jolivet PetscCall(PetscObjectContainerCompose((PetscObject)mat, "__PETSc_MatCOOStruct_Device", coo_d, MatCOOStructDestroy_SeqAIJKokkos)); 13873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 138842550becSJunchao Zhang } 138942550becSJunchao Zhang 1390d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetValuesCOO_SeqAIJKokkos(Mat A, const PetscScalar v[], InsertMode imode) 1391d71ae5a4SJacob Faibussowitsch { 139242550becSJunchao Zhang MatScalarKokkosView Aa; 139342550becSJunchao Zhang ConstMatScalarKokkosView kv; 139442550becSJunchao Zhang PetscMemType memtype; 13952c4ab24aSJunchao Zhang PetscContainer container; 13962c4ab24aSJunchao Zhang MatCOOStruct_SeqAIJKokkos *coo; 139742550becSJunchao Zhang 139842550becSJunchao Zhang PetscFunctionBegin; 13992c4ab24aSJunchao Zhang PetscCall(PetscObjectQuery((PetscObject)A, "__PETSc_MatCOOStruct_Device", (PetscObject *)&container)); 14002c4ab24aSJunchao Zhang PetscCall(PetscContainerGetPointer(container, (void **)&coo)); 14012c4ab24aSJunchao Zhang 14022c4ab24aSJunchao Zhang const auto &n = coo->n; 14032c4ab24aSJunchao Zhang const auto &Annz = coo->nz; 14042c4ab24aSJunchao Zhang const auto &jmap = coo->jmap; 14052c4ab24aSJunchao Zhang const auto &perm = coo->perm; 14062c4ab24aSJunchao Zhang 14079566063dSJacob Faibussowitsch PetscCall(PetscGetMemType(v, &memtype)); 140842550becSJunchao Zhang if (PetscMemTypeHost(memtype)) { /* If user gave v[] in host, we might need to copy it to device if any */ 14092c4ab24aSJunchao Zhang kv = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), ConstMatScalarKokkosViewHost(v, n)); 141042550becSJunchao Zhang } else { 14112c4ab24aSJunchao Zhang kv = ConstMatScalarKokkosView(v, n); /* Directly use v[]'s memory */ 141242550becSJunchao Zhang } 141342550becSJunchao Zhang 1414c7b718f4SJunchao Zhang if (imode == INSERT_VALUES) PetscCall(MatSeqAIJGetKokkosViewWrite(A, &Aa)); /* write matrix values */ 1415c7b718f4SJunchao Zhang else PetscCall(MatSeqAIJGetKokkosView(A, &Aa)); /* read & write matrix values */ 141642550becSJunchao Zhang 141708bb9926SJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 14189371c9d4SSatish Balay Kokkos::parallel_for( 1419d326c3f1SJunchao Zhang Kokkos::RangePolicy<>(PetscGetKokkosExecutionSpace(), 0, Annz), KOKKOS_LAMBDA(const PetscCount i) { 1420c7b718f4SJunchao Zhang PetscScalar sum = 0.0; 1421c7b718f4SJunchao Zhang for (PetscCount k = jmap(i); k < jmap(i + 1); k++) sum += kv(perm(k)); 1422c7b718f4SJunchao Zhang Aa(i) = (imode == INSERT_VALUES ? 0.0 : Aa(i)) + sum; 1423c7b718f4SJunchao Zhang }); 142408bb9926SJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1425394ed5ebSJunchao Zhang 14269566063dSJacob Faibussowitsch if (imode == INSERT_VALUES) PetscCall(MatSeqAIJRestoreKokkosViewWrite(A, &Aa)); 14279566063dSJacob Faibussowitsch else PetscCall(MatSeqAIJRestoreKokkosView(A, &Aa)); 14283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 142942550becSJunchao Zhang } 143042550becSJunchao Zhang 1431d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetOps_SeqAIJKokkos(Mat A) 1432d71ae5a4SJacob Faibussowitsch { 1433076ba34aSJunchao Zhang Mat_SeqAIJ *a = (Mat_SeqAIJ *)A->data; 1434076ba34aSJunchao Zhang 14358c3ff71bSJunchao Zhang PetscFunctionBegin; 1436076ba34aSJunchao Zhang A->offloadmask = PETSC_OFFLOAD_KOKKOS; /* We do not really use this flag */ 14376f3d89d0SStefano Zampini A->boundtocpu = PETSC_FALSE; 14386f3d89d0SStefano Zampini 14398c3ff71bSJunchao Zhang A->ops->assemblyend = MatAssemblyEnd_SeqAIJKokkos; 14408c3ff71bSJunchao Zhang A->ops->destroy = MatDestroy_SeqAIJKokkos; 14418c3ff71bSJunchao Zhang A->ops->duplicate = MatDuplicate_SeqAIJKokkos; 1442a587d139SMark A->ops->axpy = MatAXPY_SeqAIJKokkos; 1443f0cf5187SStefano Zampini A->ops->scale = MatScale_SeqAIJKokkos; 1444a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJKokkos; 1445076ba34aSJunchao Zhang A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJKokkos; 14468c3ff71bSJunchao Zhang A->ops->mult = MatMult_SeqAIJKokkos; 14478c3ff71bSJunchao Zhang A->ops->multadd = MatMultAdd_SeqAIJKokkos; 14488c3ff71bSJunchao Zhang A->ops->multtranspose = MatMultTranspose_SeqAIJKokkos; 14498c3ff71bSJunchao Zhang A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJKokkos; 14508c3ff71bSJunchao Zhang A->ops->multhermitiantranspose = MatMultHermitianTranspose_SeqAIJKokkos; 14518c3ff71bSJunchao Zhang A->ops->multhermitiantransposeadd = MatMultHermitianTransposeAdd_SeqAIJKokkos; 1452076ba34aSJunchao Zhang A->ops->productnumeric = MatProductNumeric_SeqAIJKokkos_SeqAIJKokkos; 14530ecb592aSJunchao Zhang A->ops->transpose = MatTranspose_SeqAIJKokkos; 1454152b3e56SJunchao Zhang A->ops->setoption = MatSetOption_SeqAIJKokkos; 1455f78ce678SMark Adams A->ops->getdiagonal = MatGetDiagonal_SeqAIJKokkos; 1456f4747e26SJunchao Zhang A->ops->shift = MatShift_SeqAIJKokkos; 1457f4747e26SJunchao Zhang A->ops->diagonalset = MatDiagonalSet_SeqAIJKokkos; 1458f4747e26SJunchao Zhang A->ops->diagonalscale = MatDiagonalScale_SeqAIJKokkos; 1459076ba34aSJunchao Zhang a->ops->getarray = MatSeqAIJGetArray_SeqAIJKokkos; 1460076ba34aSJunchao Zhang a->ops->restorearray = MatSeqAIJRestoreArray_SeqAIJKokkos; 1461076ba34aSJunchao Zhang a->ops->getarrayread = MatSeqAIJGetArrayRead_SeqAIJKokkos; 1462076ba34aSJunchao Zhang a->ops->restorearrayread = MatSeqAIJRestoreArrayRead_SeqAIJKokkos; 1463076ba34aSJunchao Zhang a->ops->getarraywrite = MatSeqAIJGetArrayWrite_SeqAIJKokkos; 1464076ba34aSJunchao Zhang a->ops->restorearraywrite = MatSeqAIJRestoreArrayWrite_SeqAIJKokkos; 14657ee59b9bSJunchao Zhang a->ops->getcsrandmemtype = MatSeqAIJGetCSRAndMemType_SeqAIJKokkos; 146642550becSJunchao Zhang 14679566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetPreallocationCOO_C", MatSetPreallocationCOO_SeqAIJKokkos)); 14689566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatSetValuesCOO_C", MatSetValuesCOO_SeqAIJKokkos)); 146957761e9aSJunchao Zhang #if defined(PETSC_HAVE_HYPRE) 147057761e9aSJunchao Zhang PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatConvert_seqaijkokkos_hypre_C", MatConvert_AIJ_HYPRE)); 147157761e9aSJunchao Zhang #endif 14723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1473076ba34aSJunchao Zhang } 1474076ba34aSJunchao Zhang 14759d13fa56SJunchao Zhang /* 14769d13fa56SJunchao Zhang Extract the (prescribled) diagonal blocks of the matrix and then invert them 14779d13fa56SJunchao Zhang 14789d13fa56SJunchao Zhang Input Parameters: 14799d13fa56SJunchao Zhang + A - the MATSEQAIJKOKKOS matrix 14809d13fa56SJunchao Zhang . bs - block sizes in 'csr' format, i.e., the i-th block has size bs(i+1) - bs(i) 14819d13fa56SJunchao Zhang . bs2 - square of block sizes in 'csr' format, i.e., the i-th block should be stored at offset bs2(i) in diagVal[] 14829d13fa56SJunchao Zhang . blkMap - map row ids to block ids, i.e., row i belongs to the block blkMap(i) 14839d13fa56SJunchao Zhang - work - a pre-allocated work buffer (as big as diagVal) for use by this routine 14849d13fa56SJunchao Zhang 14859d13fa56SJunchao Zhang Output Parameter: 14869d13fa56SJunchao Zhang . diagVal - the (pre-allocated) buffer to store the inverted blocks (each block is stored in column-major order) 14879d13fa56SJunchao Zhang */ 14889d13fa56SJunchao Zhang PETSC_INTERN PetscErrorCode MatInvertVariableBlockDiagonal_SeqAIJKokkos(Mat A, const PetscIntKokkosView &bs, const PetscIntKokkosView &bs2, const PetscIntKokkosView &blkMap, PetscScalarKokkosView &work, PetscScalarKokkosView &diagVal) 14899d13fa56SJunchao Zhang { 14909d13fa56SJunchao Zhang Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos *>(A->spptr); 14919d13fa56SJunchao Zhang PetscInt nblocks = bs.extent(0) - 1; 14929d13fa56SJunchao Zhang 14939d13fa56SJunchao Zhang PetscFunctionBegin; 14949d13fa56SJunchao Zhang PetscCall(MatSeqAIJKokkosSyncDevice(A)); // Since we'll access A's value on device 14959d13fa56SJunchao Zhang 14969d13fa56SJunchao Zhang // Pull out the diagonal blocks of the matrix and then invert the blocks 14979d13fa56SJunchao Zhang auto Aa = akok->a_dual.view_device(); 14989d13fa56SJunchao Zhang auto Ai = akok->i_dual.view_device(); 14999d13fa56SJunchao Zhang auto Aj = akok->j_dual.view_device(); 15009d13fa56SJunchao Zhang auto Adiag = akok->diag_dual.view_device(); 15019d13fa56SJunchao Zhang // TODO: how to tune the team size? 150245402d8aSJunchao Zhang #if defined(KOKKOS_ENABLE_UNIFIED_MEMORY) 15039d13fa56SJunchao Zhang auto ts = Kokkos::AUTO(); 15049d13fa56SJunchao Zhang #else 15059d13fa56SJunchao Zhang auto ts = 16; // improved performance 30% over Kokkos::AUTO() with CUDA, but failed with "Kokkos::abort: Requested Team Size is too large!" on CPUs 15069d13fa56SJunchao Zhang #endif 15079d13fa56SJunchao Zhang PetscCallCXX(Kokkos::parallel_for( 1508d326c3f1SJunchao Zhang Kokkos::TeamPolicy<>(PetscGetKokkosExecutionSpace(), nblocks, ts), KOKKOS_LAMBDA(const KokkosTeamMemberType &teamMember) { 15099d13fa56SJunchao Zhang const PetscInt bid = teamMember.league_rank(); // block id 15109d13fa56SJunchao Zhang const PetscInt rstart = bs(bid); // this block starts from this row 15119d13fa56SJunchao Zhang const PetscInt m = bs(bid + 1) - bs(bid); // size of this block 15129d13fa56SJunchao Zhang const auto &B = Kokkos::View<PetscScalar **, Kokkos::LayoutLeft>(&diagVal(bs2(bid)), m, m); // column-major order 15139d13fa56SJunchao Zhang const auto &W = PetscScalarKokkosView(&work(bs2(bid)), m * m); 15149d13fa56SJunchao Zhang 15159d13fa56SJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(teamMember, m), [=](const PetscInt &r) { // r-th row in B 15169d13fa56SJunchao Zhang PetscInt i = rstart + r; // i-th row in A 15179d13fa56SJunchao Zhang 15189d13fa56SJunchao Zhang if (Ai(i) <= Adiag(i) && Adiag(i) < Ai(i + 1)) { // if the diagonal exists (common case) 15199d13fa56SJunchao Zhang PetscInt first = Adiag(i) - r; // we start to check nonzeros from here along this row 15209d13fa56SJunchao Zhang 15219d13fa56SJunchao Zhang for (PetscInt c = 0; c < m; c++) { // walk n steps to see what column indices we will meet 15229d13fa56SJunchao Zhang if (first + c < Ai(i) || first + c >= Ai(i + 1)) { // this entry (first+c) is out of range of this row, in other words, its value is zero 15239d13fa56SJunchao Zhang B(r, c) = 0.0; 15249d13fa56SJunchao Zhang } else if (Aj(first + c) == rstart + c) { // this entry is right on the (rstart+c) column 15259d13fa56SJunchao Zhang B(r, c) = Aa(first + c); 15269d13fa56SJunchao Zhang } else { // this entry does not show up in the CSR 15279d13fa56SJunchao Zhang B(r, c) = 0.0; 15289d13fa56SJunchao Zhang } 15299d13fa56SJunchao Zhang } 15309d13fa56SJunchao Zhang } else { // rare case that the diagonal does not exist 15319d13fa56SJunchao Zhang const PetscInt begin = Ai(i); 15329d13fa56SJunchao Zhang const PetscInt end = Ai(i + 1); 15339d13fa56SJunchao Zhang for (PetscInt c = 0; c < m; c++) B(r, c) = 0.0; 15349d13fa56SJunchao Zhang for (PetscInt j = begin; j < end; j++) { // scan the whole row; could use binary search but this is a rare case so we did not. 15359d13fa56SJunchao Zhang if (rstart <= Aj(j) && Aj(j) < rstart + m) B(r, Aj(j) - rstart) = Aa(j); 15369d13fa56SJunchao Zhang else if (Aj(j) >= rstart + m) break; 15379d13fa56SJunchao Zhang } 15389d13fa56SJunchao Zhang } 15399d13fa56SJunchao Zhang }); 15409d13fa56SJunchao Zhang 15419d13fa56SJunchao Zhang // LU-decompose B (w/o pivoting) and then invert B 15429d13fa56SJunchao Zhang KokkosBatched::TeamLU<KokkosTeamMemberType, KokkosBatched::Algo::LU::Unblocked>::invoke(teamMember, B, 0.0); 15439d13fa56SJunchao Zhang KokkosBatched::TeamInverseLU<KokkosTeamMemberType, KokkosBatched::Algo::InverseLU::Unblocked>::invoke(teamMember, B, W); 15449d13fa56SJunchao Zhang })); 15459d13fa56SJunchao Zhang // PetscLogGpuFlops() is done in the caller PCSetUp_VPBJacobi_Kokkos as we don't want to compute the flops in kernels 15469d13fa56SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 15479d13fa56SJunchao Zhang } 15489d13fa56SJunchao Zhang 1549d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatSetSeqAIJKokkosWithCSRMatrix(Mat A, Mat_SeqAIJKokkos *akok) 1550d71ae5a4SJacob Faibussowitsch { 1551076ba34aSJunchao Zhang Mat_SeqAIJ *aseq; 1552076ba34aSJunchao Zhang PetscInt i, m, n; 15534df4a32cSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 1554076ba34aSJunchao Zhang 1555076ba34aSJunchao Zhang PetscFunctionBegin; 15565f80ce2aSJacob Faibussowitsch PetscCheck(!A->spptr, PETSC_COMM_SELF, PETSC_ERR_PLIB, "A->spptr is supposed to be empty"); 1557076ba34aSJunchao Zhang 1558076ba34aSJunchao Zhang m = akok->nrows(); 1559076ba34aSJunchao Zhang n = akok->ncols(); 15609566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, m, n, m, n)); 15619566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATSEQAIJKOKKOS)); 1562076ba34aSJunchao Zhang 1563076ba34aSJunchao Zhang /* Set up data structures of A as a MATSEQAIJ */ 15649566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(A, MAT_SKIP_ALLOCATION, NULL)); 156557508eceSPierre Jolivet aseq = (Mat_SeqAIJ *)A->data; 1566076ba34aSJunchao Zhang 1567e36ced11SJunchao Zhang PetscCallCXX(akok->i_dual.sync_host(exec)); /* We always need sync'ed i, j on host */ 1568e36ced11SJunchao Zhang PetscCallCXX(akok->j_dual.sync_host(exec)); 1569e36ced11SJunchao Zhang PetscCallCXX(exec.fence()); 1570076ba34aSJunchao Zhang 1571076ba34aSJunchao Zhang aseq->i = akok->i_host_data(); 1572076ba34aSJunchao Zhang aseq->j = akok->j_host_data(); 1573076ba34aSJunchao Zhang aseq->a = akok->a_host_data(); 1574076ba34aSJunchao Zhang aseq->nonew = -1; /*this indicates that inserting a new value in the matrix that generates a new nonzero is an error*/ 1575076ba34aSJunchao Zhang aseq->free_a = PETSC_FALSE; 1576076ba34aSJunchao Zhang aseq->free_ij = PETSC_FALSE; 1577076ba34aSJunchao Zhang aseq->nz = akok->nnz(); 1578076ba34aSJunchao Zhang aseq->maxnz = aseq->nz; 1579076ba34aSJunchao Zhang 15809566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &aseq->imax)); 15819566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &aseq->ilen)); 1582ad540459SPierre Jolivet for (i = 0; i < m; i++) aseq->ilen[i] = aseq->imax[i] = aseq->i[i + 1] - aseq->i[i]; 1583076ba34aSJunchao Zhang 1584076ba34aSJunchao Zhang /* It is critical to set the nonzerostate, as we use it to check if sparsity pattern (hence data) has changed on host in MatAssemblyEnd */ 1585076ba34aSJunchao Zhang akok->nonzerostate = A->nonzerostate; 1586ff751488SJunchao Zhang A->spptr = akok; /* Set A->spptr before MatAssembly so that A->spptr won't be allocated again there */ 15879566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 15889566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 15893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1590076ba34aSJunchao Zhang } 1591076ba34aSJunchao Zhang 15920e3ece09SJunchao Zhang PETSC_INTERN PetscErrorCode MatSeqAIJKokkosGetKokkosCsrMatrix(Mat A, KokkosCsrMatrix *csr) 15930e3ece09SJunchao Zhang { 15940e3ece09SJunchao Zhang PetscFunctionBegin; 15950e3ece09SJunchao Zhang PetscCall(MatSeqAIJKokkosSyncDevice(A)); 15960e3ece09SJunchao Zhang *csr = static_cast<Mat_SeqAIJKokkos *>(A->spptr)->csrmat; 15970e3ece09SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 15980e3ece09SJunchao Zhang } 15990e3ece09SJunchao Zhang 16000e3ece09SJunchao Zhang PETSC_INTERN PetscErrorCode MatCreateSeqAIJKokkosWithKokkosCsrMatrix(MPI_Comm comm, KokkosCsrMatrix csr, Mat *A) 16010e3ece09SJunchao Zhang { 16020e3ece09SJunchao Zhang Mat_SeqAIJKokkos *akok; 16034d86920dSPierre Jolivet 16040e3ece09SJunchao Zhang PetscFunctionBegin; 16050e3ece09SJunchao Zhang PetscCallCXX(akok = new Mat_SeqAIJKokkos(csr)); 16060e3ece09SJunchao Zhang PetscCall(MatCreate(comm, A)); 16070e3ece09SJunchao Zhang PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(*A, akok)); 16080e3ece09SJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 16090e3ece09SJunchao Zhang } 16100e3ece09SJunchao Zhang 1611076ba34aSJunchao Zhang /* Crete a SEQAIJKOKKOS matrix with a Mat_SeqAIJKokkos data structure 1612076ba34aSJunchao Zhang 1613076ba34aSJunchao Zhang Note we have names like MatSeqAIJSetPreallocationCSR, so I use capitalized CSR 1614076ba34aSJunchao Zhang */ 1615d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatCreateSeqAIJKokkosWithCSRMatrix(MPI_Comm comm, Mat_SeqAIJKokkos *akok, Mat *A) 1616d71ae5a4SJacob Faibussowitsch { 1617076ba34aSJunchao Zhang PetscFunctionBegin; 16189566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 16199566063dSJacob Faibussowitsch PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(*A, akok)); 16203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16218c3ff71bSJunchao Zhang } 16228c3ff71bSJunchao Zhang 1623152b3e56SJunchao Zhang /*@C 162411a5261eSBarry Smith MatCreateSeqAIJKokkos - Creates a sparse matrix in `MATSEQAIJKOKKOS` (compressed row) format 16258c3ff71bSJunchao Zhang (the default parallel PETSc format). This matrix will ultimately be handled by 162620f4b53cSBarry Smith Kokkos for calculations. 16278c3ff71bSJunchao Zhang 16288c3ff71bSJunchao Zhang Collective 16298c3ff71bSJunchao Zhang 16308c3ff71bSJunchao Zhang Input Parameters: 163111a5261eSBarry Smith + comm - MPI communicator, set to `PETSC_COMM_SELF` 16328c3ff71bSJunchao Zhang . m - number of rows 16338c3ff71bSJunchao Zhang . n - number of columns 163420f4b53cSBarry Smith . nz - number of nonzeros per row (same for all rows), ignored if `nnz` is provided 163520f4b53cSBarry Smith - nnz - array containing the number of nonzeros in the various rows (possibly different for each row) or `NULL` 16368c3ff71bSJunchao Zhang 16378c3ff71bSJunchao Zhang Output Parameter: 16388c3ff71bSJunchao Zhang . A - the matrix 16398c3ff71bSJunchao Zhang 16402ef1f0ffSBarry Smith Level: intermediate 16412ef1f0ffSBarry Smith 16422ef1f0ffSBarry Smith Notes: 164311a5261eSBarry Smith It is recommended that one use the `MatCreate()`, `MatSetType()` and/or `MatSetFromOptions()`, 16448c3ff71bSJunchao Zhang MatXXXXSetPreallocation() paradgm instead of this routine directly. 164511a5261eSBarry Smith [MatXXXXSetPreallocation() is, for example, `MatSeqAIJSetPreallocation()`] 16468c3ff71bSJunchao Zhang 164711a5261eSBarry Smith The AIJ format, also called 16482ef1f0ffSBarry Smith compressed row storage, is fully compatible with standard Fortran 16498c3ff71bSJunchao Zhang storage. That is, the stored row and column indices can begin at 165020f4b53cSBarry Smith either one (as in Fortran) or zero. 16518c3ff71bSJunchao Zhang 16522ef1f0ffSBarry Smith Specify the preallocated storage with either `nz` or `nnz` (not both). 16532ef1f0ffSBarry Smith Set `nz` = `PETSC_DEFAULT` and `nnz` = `NULL` for PETSc to control dynamic memory 16542ef1f0ffSBarry Smith allocation. 16558c3ff71bSJunchao Zhang 1656fe59aa6dSJacob Faibussowitsch .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MatCreateAIJ()`, `MatSetValues()`, `MatSeqAIJSetColumnIndices()`, `MatCreateSeqAIJWithArrays()` 16578c3ff71bSJunchao Zhang @*/ 1658d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateSeqAIJKokkos(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt nz, const PetscInt nnz[], Mat *A) 1659d71ae5a4SJacob Faibussowitsch { 16608c3ff71bSJunchao Zhang PetscFunctionBegin; 16619566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 16629566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 16639566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, m, n)); 16649566063dSJacob Faibussowitsch PetscCall(MatSetType(*A, MATSEQAIJKOKKOS)); 16659566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(*A, nz, (PetscInt *)nnz)); 16663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16678c3ff71bSJunchao Zhang } 1668930e68a5SMark Adams 1669aac854edSJunchao Zhang // After matrix numeric factorization, there are still steps to do before triangular solve can be called. 1670aac854edSJunchao Zhang // For example, for transpose solve, we might need to compute the transpose matrices if the solver does not support it (such as KK, while cusparse does). 1671aac854edSJunchao Zhang // In cusparse, one has to call cusparseSpSV_analysis() with updated triangular matrix values before calling cusparseSpSV_solve(). 1672aac854edSJunchao Zhang // Simiarily, in KK sptrsv_symbolic() has to be called before sptrsv_solve(). We put these steps in MatSeqAIJKokkos{Transpose}SolveCheck. 1673aac854edSJunchao Zhang static PetscErrorCode MatSeqAIJKokkosSolveCheck(Mat A) 1674d71ae5a4SJacob Faibussowitsch { 167586a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)A->spptr; 1676aac854edSJunchao Zhang const PetscBool has_lower = factors->iL_d.extent(0) ? PETSC_TRUE : PETSC_FALSE; // false with Choleksy 1677aac854edSJunchao Zhang const PetscBool has_upper = factors->iU_d.extent(0) ? PETSC_TRUE : PETSC_FALSE; // true with LU and Choleksy 167886a27549SJunchao Zhang 167986a27549SJunchao Zhang PetscFunctionBegin; 1680aac854edSJunchao Zhang if (!factors->sptrsv_symbolic_completed) { // If sptrsv_symbolic was not called yet 1681aac854edSJunchao Zhang if (has_upper) PetscCallCXX(sptrsv_symbolic(&factors->khU, factors->iU_d, factors->jU_d, factors->aU_d)); 1682aac854edSJunchao Zhang if (has_lower) PetscCallCXX(sptrsv_symbolic(&factors->khL, factors->iL_d, factors->jL_d, factors->aL_d)); 168386a27549SJunchao Zhang factors->sptrsv_symbolic_completed = PETSC_TRUE; 168486a27549SJunchao Zhang } 16853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 168686a27549SJunchao Zhang } 168786a27549SJunchao Zhang 1688d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSeqAIJKokkosTransposeSolveCheck(Mat A) 1689d71ae5a4SJacob Faibussowitsch { 1690aac854edSJunchao Zhang const PetscInt n = A->rmap->n; 169186a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)A->spptr; 1692aac854edSJunchao Zhang const PetscBool has_lower = factors->iL_d.extent(0) ? PETSC_TRUE : PETSC_FALSE; // false with Choleksy 1693aac854edSJunchao Zhang const PetscBool has_upper = factors->iU_d.extent(0) ? PETSC_TRUE : PETSC_FALSE; // true with LU or Choleksy 169486a27549SJunchao Zhang 169586a27549SJunchao Zhang PetscFunctionBegin; 1696aac854edSJunchao Zhang if (!factors->transpose_updated) { 1697aac854edSJunchao Zhang if (has_upper) { 1698aac854edSJunchao Zhang if (!factors->iUt_d.extent(0)) { // Allocate Ut on device if not yet 1699aac854edSJunchao Zhang factors->iUt_d = MatRowMapKokkosView("factors->iUt_d", n + 1); // KK requires this view to be initialized to 0 to call transpose_matrix 17007b8d4ba6SJunchao Zhang factors->jUt_d = MatColIdxKokkosView(NoInit("factors->jUt_d"), factors->jU_d.extent(0)); 17017b8d4ba6SJunchao Zhang factors->aUt_d = MatScalarKokkosView(NoInit("factors->aUt_d"), factors->aU_d.extent(0)); 1702aac854edSJunchao Zhang } 170386a27549SJunchao Zhang 1704aac854edSJunchao Zhang if (factors->iU_h.extent(0)) { // If U is on host (factorization was done on host), we also compute the transpose on host 1705aac854edSJunchao Zhang if (!factors->U) { 1706aac854edSJunchao Zhang Mat_SeqAIJ *seq; 170786a27549SJunchao Zhang 1708aac854edSJunchao Zhang PetscCall(MatCreateSeqAIJWithArrays(PETSC_COMM_SELF, n, n, factors->iU_h.data(), factors->jU_h.data(), factors->aU_h.data(), &factors->U)); 1709aac854edSJunchao Zhang PetscCall(MatTranspose(factors->U, MAT_INITIAL_MATRIX, &factors->Ut)); 171086a27549SJunchao Zhang 1711aac854edSJunchao Zhang seq = static_cast<Mat_SeqAIJ *>(factors->Ut->data); 1712aac854edSJunchao Zhang factors->iUt_h = MatRowMapKokkosViewHost(seq->i, n + 1); 1713aac854edSJunchao Zhang factors->jUt_h = MatColIdxKokkosViewHost(seq->j, seq->nz); 1714aac854edSJunchao Zhang factors->aUt_h = MatScalarKokkosViewHost(seq->a, seq->nz); 1715aac854edSJunchao Zhang } else { 1716aac854edSJunchao Zhang PetscCall(MatTranspose(factors->U, MAT_REUSE_MATRIX, &factors->Ut)); // Matrix Ut' data is aliased with {i, j, a}Ut_h 1717aac854edSJunchao Zhang } 1718aac854edSJunchao Zhang // Copy Ut from host to device 1719aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->iUt_d, factors->iUt_h)); 1720aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->jUt_d, factors->jUt_h)); 1721aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->aUt_d, factors->aUt_h)); 1722aac854edSJunchao Zhang } else { // If U was computed on device, we also compute the transpose there 1723aac854edSJunchao Zhang // TODO: KK transpose_matrix() does not sort column indices, however cusparse requires sorted indices. We have to sort the indices, until KK provides finer control options. 1724aac854edSJunchao Zhang PetscCallCXX(transpose_matrix<ConstMatRowMapKokkosView, ConstMatColIdxKokkosView, ConstMatScalarKokkosView, MatRowMapKokkosView, MatColIdxKokkosView, MatScalarKokkosView, MatRowMapKokkosView, DefaultExecutionSpace>(n, n, factors->iU_d, 1725aac854edSJunchao Zhang factors->jU_d, factors->aU_d, 1726aac854edSJunchao Zhang factors->iUt_d, factors->jUt_d, 1727aac854edSJunchao Zhang factors->aUt_d)); 1728aac854edSJunchao Zhang PetscCallCXX(sort_crs_matrix<DefaultExecutionSpace, MatRowMapKokkosView, MatColIdxKokkosView, MatScalarKokkosView>(factors->iUt_d, factors->jUt_d, factors->aUt_d)); 1729aac854edSJunchao Zhang } 1730aac854edSJunchao Zhang PetscCallCXX(sptrsv_symbolic(&factors->khUt, factors->iUt_d, factors->jUt_d, factors->aUt_d)); 1731aac854edSJunchao Zhang } 1732aac854edSJunchao Zhang 1733aac854edSJunchao Zhang // do the same for L with LU 1734aac854edSJunchao Zhang if (has_lower) { 1735aac854edSJunchao Zhang if (!factors->iLt_d.extent(0)) { // Allocate Lt on device if not yet 1736aac854edSJunchao Zhang factors->iLt_d = MatRowMapKokkosView("factors->iLt_d", n + 1); // KK requires this view to be initialized to 0 to call transpose_matrix 1737aac854edSJunchao Zhang factors->jLt_d = MatColIdxKokkosView(NoInit("factors->jLt_d"), factors->jL_d.extent(0)); 1738aac854edSJunchao Zhang factors->aLt_d = MatScalarKokkosView(NoInit("factors->aLt_d"), factors->aL_d.extent(0)); 1739aac854edSJunchao Zhang } 1740aac854edSJunchao Zhang 1741aac854edSJunchao Zhang if (factors->iL_h.extent(0)) { // If L is on host, we also compute the transpose on host 1742aac854edSJunchao Zhang if (!factors->L) { 1743aac854edSJunchao Zhang Mat_SeqAIJ *seq; 1744aac854edSJunchao Zhang 1745aac854edSJunchao Zhang PetscCall(MatCreateSeqAIJWithArrays(PETSC_COMM_SELF, n, n, factors->iL_h.data(), factors->jL_h.data(), factors->aL_h.data(), &factors->L)); 1746aac854edSJunchao Zhang PetscCall(MatTranspose(factors->L, MAT_INITIAL_MATRIX, &factors->Lt)); 1747aac854edSJunchao Zhang 1748aac854edSJunchao Zhang seq = static_cast<Mat_SeqAIJ *>(factors->Lt->data); 1749aac854edSJunchao Zhang factors->iLt_h = MatRowMapKokkosViewHost(seq->i, n + 1); 1750aac854edSJunchao Zhang factors->jLt_h = MatColIdxKokkosViewHost(seq->j, seq->nz); 1751aac854edSJunchao Zhang factors->aLt_h = MatScalarKokkosViewHost(seq->a, seq->nz); 1752aac854edSJunchao Zhang } else { 1753aac854edSJunchao Zhang PetscCall(MatTranspose(factors->L, MAT_REUSE_MATRIX, &factors->Lt)); // Matrix Lt' data is aliased with {i, j, a}Lt_h 1754aac854edSJunchao Zhang } 1755aac854edSJunchao Zhang // Copy Lt from host to device 1756aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->iLt_d, factors->iLt_h)); 1757aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->jLt_d, factors->jLt_h)); 1758aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->aLt_d, factors->aLt_h)); 1759aac854edSJunchao Zhang } else { // If L was computed on device, we also compute the transpose there 1760aac854edSJunchao Zhang // TODO: KK transpose_matrix() does not sort column indices, however cusparse requires sorted indices. We have to sort the indices, until KK provides finer control options. 1761aac854edSJunchao Zhang PetscCallCXX(transpose_matrix<ConstMatRowMapKokkosView, ConstMatColIdxKokkosView, ConstMatScalarKokkosView, MatRowMapKokkosView, MatColIdxKokkosView, MatScalarKokkosView, MatRowMapKokkosView, DefaultExecutionSpace>(n, n, factors->iL_d, 1762aac854edSJunchao Zhang factors->jL_d, factors->aL_d, 1763aac854edSJunchao Zhang factors->iLt_d, factors->jLt_d, 1764aac854edSJunchao Zhang factors->aLt_d)); 1765aac854edSJunchao Zhang PetscCallCXX(sort_crs_matrix<DefaultExecutionSpace, MatRowMapKokkosView, MatColIdxKokkosView, MatScalarKokkosView>(factors->iLt_d, factors->jLt_d, factors->aLt_d)); 1766aac854edSJunchao Zhang } 1767aac854edSJunchao Zhang PetscCallCXX(sptrsv_symbolic(&factors->khLt, factors->iLt_d, factors->jLt_d, factors->aLt_d)); 1768aac854edSJunchao Zhang } 1769aac854edSJunchao Zhang 177086a27549SJunchao Zhang factors->transpose_updated = PETSC_TRUE; 177186a27549SJunchao Zhang } 17723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 177386a27549SJunchao Zhang } 177486a27549SJunchao Zhang 1775aac854edSJunchao Zhang // Solve Ax = b, with RAR = U^T D U, where R is the row (and col) permutation matrix on A. 1776aac854edSJunchao Zhang // R is represented by rowperm in factors. If R is identity (i.e, no reordering), then rowperm is empty. 1777aac854edSJunchao Zhang static PetscErrorCode MatSolve_SeqAIJKokkos_Cholesky(Mat A, Vec bb, Vec xx) 1778d71ae5a4SJacob Faibussowitsch { 1779aac854edSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 178086a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)A->spptr; 1781aac854edSJunchao Zhang PetscInt m = A->rmap->n; 1782aac854edSJunchao Zhang PetscScalarKokkosView D = factors->D_d; 1783aac854edSJunchao Zhang PetscScalarKokkosView X, Y, B; // alias 1784aac854edSJunchao Zhang ConstPetscScalarKokkosView b; 1785aac854edSJunchao Zhang PetscScalarKokkosView x; 1786aac854edSJunchao Zhang PetscIntKokkosView &rowperm = factors->rowperm; 1787aac854edSJunchao Zhang PetscBool identity = rowperm.extent(0) ? PETSC_FALSE : PETSC_TRUE; 178886a27549SJunchao Zhang 178986a27549SJunchao Zhang PetscFunctionBegin; 17909566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1791aac854edSJunchao Zhang PetscCall(MatSeqAIJKokkosSolveCheck(A)); // for UX = T 1792aac854edSJunchao Zhang PetscCall(MatSeqAIJKokkosTransposeSolveCheck(A)); // for U^T Y = B 1793aac854edSJunchao Zhang PetscCall(VecGetKokkosView(bb, &b)); 1794aac854edSJunchao Zhang PetscCall(VecGetKokkosViewWrite(xx, &x)); 1795aac854edSJunchao Zhang 1796aac854edSJunchao Zhang // Solve U^T Y = B 1797aac854edSJunchao Zhang if (identity) { // Reorder b with the row permutation 1798aac854edSJunchao Zhang B = PetscScalarKokkosView(const_cast<PetscScalar *>(b.data()), b.extent(0)); 1799aac854edSJunchao Zhang Y = factors->workVector; 1800aac854edSJunchao Zhang } else { 1801aac854edSJunchao Zhang B = factors->workVector; 1802aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { B(i) = b(rowperm(i)); })); 1803aac854edSJunchao Zhang Y = x; 1804aac854edSJunchao Zhang } 1805aac854edSJunchao Zhang PetscCallCXX(sptrsv_solve(exec, &factors->khUt, factors->iUt_d, factors->jUt_d, factors->aUt_d, B, Y)); 1806aac854edSJunchao Zhang 1807aac854edSJunchao Zhang // Solve diag(D) Y' = Y. 1808aac854edSJunchao Zhang // Actually just do Y' = Y*D since D is already inverted in MatCholeskyFactorNumeric_SeqAIJ(). It is basically a vector element-wise multiplication. 1809aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { Y(i) = Y(i) * D(i); })); 1810aac854edSJunchao Zhang 1811aac854edSJunchao Zhang // Solve UX = Y 1812aac854edSJunchao Zhang if (identity) { 1813aac854edSJunchao Zhang X = x; 1814aac854edSJunchao Zhang } else { 1815aac854edSJunchao Zhang X = factors->workVector; // B is not needed anymore 1816aac854edSJunchao Zhang } 1817aac854edSJunchao Zhang PetscCallCXX(sptrsv_solve(exec, &factors->khU, factors->iU_d, factors->jU_d, factors->aU_d, Y, X)); 1818aac854edSJunchao Zhang 1819aac854edSJunchao Zhang // Reorder X with the inverse column (row) permutation 1820aac854edSJunchao Zhang if (!identity) { 1821aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { x(rowperm(i)) = X(i); })); 1822aac854edSJunchao Zhang } 1823aac854edSJunchao Zhang 1824aac854edSJunchao Zhang PetscCall(VecRestoreKokkosView(bb, &b)); 1825aac854edSJunchao Zhang PetscCall(VecRestoreKokkosViewWrite(xx, &x)); 18269566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 18273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 182886a27549SJunchao Zhang } 182986a27549SJunchao Zhang 1830aac854edSJunchao Zhang // Solve Ax = b, with RAC = LU, where R and C are row and col permutation matrices on A respectively. 1831aac854edSJunchao Zhang // R and C are represented by rowperm and colperm in factors. 1832aac854edSJunchao Zhang // If R or C is identity (i.e, no reordering), then rowperm or colperm is empty. 1833aac854edSJunchao Zhang static PetscErrorCode MatSolve_SeqAIJKokkos_LU(Mat A, Vec bb, Vec xx) 1834d71ae5a4SJacob Faibussowitsch { 1835aac854edSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 183686a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)A->spptr; 1837aac854edSJunchao Zhang PetscInt m = A->rmap->n; 1838aac854edSJunchao Zhang PetscScalarKokkosView X, Y, B; // alias 1839aac854edSJunchao Zhang ConstPetscScalarKokkosView b; 1840aac854edSJunchao Zhang PetscScalarKokkosView x; 1841aac854edSJunchao Zhang PetscIntKokkosView &rowperm = factors->rowperm; 1842aac854edSJunchao Zhang PetscIntKokkosView &colperm = factors->colperm; 1843aac854edSJunchao Zhang PetscBool row_identity = rowperm.extent(0) ? PETSC_FALSE : PETSC_TRUE; 1844aac854edSJunchao Zhang PetscBool col_identity = colperm.extent(0) ? PETSC_FALSE : PETSC_TRUE; 184586a27549SJunchao Zhang 184686a27549SJunchao Zhang PetscFunctionBegin; 18479566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 1848aac854edSJunchao Zhang PetscCall(MatSeqAIJKokkosSolveCheck(A)); 1849aac854edSJunchao Zhang PetscCall(VecGetKokkosView(bb, &b)); 1850aac854edSJunchao Zhang PetscCall(VecGetKokkosViewWrite(xx, &x)); 185186a27549SJunchao Zhang 1852aac854edSJunchao Zhang // Solve L Y = B (i.e., L (U C^- x) = R b). R b indicates applying the row permutation on b. 1853aac854edSJunchao Zhang if (row_identity) { 1854aac854edSJunchao Zhang B = PetscScalarKokkosView(const_cast<PetscScalar *>(b.data()), b.extent(0)); 1855aac854edSJunchao Zhang Y = factors->workVector; 1856aac854edSJunchao Zhang } else { 1857aac854edSJunchao Zhang B = factors->workVector; 1858aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { B(i) = b(rowperm(i)); })); 1859aac854edSJunchao Zhang Y = x; 1860aac854edSJunchao Zhang } 1861aac854edSJunchao Zhang PetscCallCXX(sptrsv_solve(exec, &factors->khL, factors->iL_d, factors->jL_d, factors->aL_d, B, Y)); 1862aac854edSJunchao Zhang 1863aac854edSJunchao Zhang // Solve U C^- x = Y 1864aac854edSJunchao Zhang if (col_identity) { 1865aac854edSJunchao Zhang X = x; 1866aac854edSJunchao Zhang } else { 1867aac854edSJunchao Zhang X = factors->workVector; 1868aac854edSJunchao Zhang } 1869aac854edSJunchao Zhang PetscCallCXX(sptrsv_solve(exec, &factors->khU, factors->iU_d, factors->jU_d, factors->aU_d, Y, X)); 1870aac854edSJunchao Zhang 1871aac854edSJunchao Zhang // x = C X; Reorder X with the inverse col permutation 1872aac854edSJunchao Zhang if (!col_identity) { 1873aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { x(colperm(i)) = X(i); })); 1874aac854edSJunchao Zhang } 1875aac854edSJunchao Zhang 1876aac854edSJunchao Zhang PetscCall(VecRestoreKokkosView(bb, &b)); 1877aac854edSJunchao Zhang PetscCall(VecRestoreKokkosViewWrite(xx, &x)); 18789566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 18793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 188086a27549SJunchao Zhang } 188186a27549SJunchao Zhang 1882aac854edSJunchao Zhang // Solve A^T x = b, with RAC = LU, where R and C are row and col permutation matrices on A respectively. 1883aac854edSJunchao Zhang // R and C are represented by rowperm and colperm in factors. 1884aac854edSJunchao Zhang // If R or C is identity (i.e, no reordering), then rowperm or colperm is empty. 1885aac854edSJunchao Zhang // A = R^-1 L U C^-1, so A^T = C^-T U^T L^T R^-T. But since C^- = C^T, R^- = R^T, we have A^T = C U^T L^T R. 1886aac854edSJunchao Zhang static PetscErrorCode MatSolveTranspose_SeqAIJKokkos_LU(Mat A, Vec bb, Vec xx) 1887aac854edSJunchao Zhang { 1888aac854edSJunchao Zhang auto exec = PetscGetKokkosExecutionSpace(); 1889aac854edSJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)A->spptr; 1890aac854edSJunchao Zhang PetscInt m = A->rmap->n; 1891aac854edSJunchao Zhang PetscScalarKokkosView X, Y, B; // alias 1892aac854edSJunchao Zhang ConstPetscScalarKokkosView b; 1893aac854edSJunchao Zhang PetscScalarKokkosView x; 1894aac854edSJunchao Zhang PetscIntKokkosView &rowperm = factors->rowperm; 1895aac854edSJunchao Zhang PetscIntKokkosView &colperm = factors->colperm; 1896aac854edSJunchao Zhang PetscBool row_identity = rowperm.extent(0) ? PETSC_FALSE : PETSC_TRUE; 1897aac854edSJunchao Zhang PetscBool col_identity = colperm.extent(0) ? PETSC_FALSE : PETSC_TRUE; 1898aac854edSJunchao Zhang 1899aac854edSJunchao Zhang PetscFunctionBegin; 1900aac854edSJunchao Zhang PetscCall(PetscLogGpuTimeBegin()); 1901aac854edSJunchao Zhang PetscCall(MatSeqAIJKokkosTransposeSolveCheck(A)); // Update L^T, U^T if needed, and do sptrsv symbolic for L^T, U^T 1902aac854edSJunchao Zhang PetscCall(VecGetKokkosView(bb, &b)); 1903aac854edSJunchao Zhang PetscCall(VecGetKokkosViewWrite(xx, &x)); 1904aac854edSJunchao Zhang 1905aac854edSJunchao Zhang // Solve U^T Y = B (i.e., U^T (L^T R x) = C^- b). Note C^- b = C^T b, which means applying the column permutation on b. 1906aac854edSJunchao Zhang if (col_identity) { // Reorder b with the col permutation 1907aac854edSJunchao Zhang B = PetscScalarKokkosView(const_cast<PetscScalar *>(b.data()), b.extent(0)); 1908aac854edSJunchao Zhang Y = factors->workVector; 1909aac854edSJunchao Zhang } else { 1910aac854edSJunchao Zhang B = factors->workVector; 1911aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { B(i) = b(colperm(i)); })); 1912aac854edSJunchao Zhang Y = x; 1913aac854edSJunchao Zhang } 1914aac854edSJunchao Zhang PetscCallCXX(sptrsv_solve(exec, &factors->khUt, factors->iUt_d, factors->jUt_d, factors->aUt_d, B, Y)); 1915aac854edSJunchao Zhang 1916aac854edSJunchao Zhang // Solve L^T X = Y 1917aac854edSJunchao Zhang if (row_identity) { 1918aac854edSJunchao Zhang X = x; 1919aac854edSJunchao Zhang } else { 1920aac854edSJunchao Zhang X = factors->workVector; 1921aac854edSJunchao Zhang } 1922aac854edSJunchao Zhang PetscCallCXX(sptrsv_solve(exec, &factors->khLt, factors->iLt_d, factors->jLt_d, factors->aLt_d, Y, X)); 1923aac854edSJunchao Zhang 1924aac854edSJunchao Zhang // x = R^- X = R^T X; Reorder X with the inverse row permutation 1925aac854edSJunchao Zhang if (!row_identity) { 1926aac854edSJunchao Zhang PetscCallCXX(Kokkos::parallel_for(Kokkos::RangePolicy<>(exec, 0, m), KOKKOS_LAMBDA(const PetscInt i) { x(rowperm(i)) = X(i); })); 1927aac854edSJunchao Zhang } 1928aac854edSJunchao Zhang 1929aac854edSJunchao Zhang PetscCall(VecRestoreKokkosView(bb, &b)); 1930aac854edSJunchao Zhang PetscCall(VecRestoreKokkosViewWrite(xx, &x)); 1931aac854edSJunchao Zhang PetscCall(PetscLogGpuTimeEnd()); 1932aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 1933aac854edSJunchao Zhang } 1934aac854edSJunchao Zhang 1935aac854edSJunchao Zhang static PetscErrorCode MatLUFactorNumeric_SeqAIJKokkos(Mat B, Mat A, const MatFactorInfo *info) 1936aac854edSJunchao Zhang { 1937aac854edSJunchao Zhang PetscFunctionBegin; 1938aac854edSJunchao Zhang PetscCall(MatSeqAIJKokkosSyncHost(A)); 1939aac854edSJunchao Zhang PetscCall(MatLUFactorNumeric_SeqAIJ(B, A, info)); 1940aac854edSJunchao Zhang 1941aac854edSJunchao Zhang if (!info->solveonhost) { // if solve on host, then we don't need to copy L, U to device 1942aac854edSJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)B->spptr; 1943aac854edSJunchao Zhang Mat_SeqAIJ *b = static_cast<Mat_SeqAIJ *>(B->data); 1944aac854edSJunchao Zhang const PetscInt *Bi = b->i, *Bj = b->j, *Bdiag = b->diag; 1945aac854edSJunchao Zhang const MatScalar *Ba = b->a; 1946aac854edSJunchao Zhang PetscInt m = B->rmap->n, n = B->cmap->n; 1947aac854edSJunchao Zhang 1948aac854edSJunchao Zhang if (factors->iL_h.extent(0) == 0) { // Allocate memory and copy the L, U structure for the first time 1949aac854edSJunchao Zhang // Allocate memory and copy the structure 1950aac854edSJunchao Zhang factors->iL_h = MatRowMapKokkosViewHost(NoInit("iL_h"), m + 1); 1951aac854edSJunchao Zhang factors->jL_h = MatColIdxKokkosViewHost(NoInit("jL_h"), (Bi[m] - Bi[0]) + m); // + the diagonal entries 1952aac854edSJunchao Zhang factors->aL_h = MatScalarKokkosViewHost(NoInit("aL_h"), (Bi[m] - Bi[0]) + m); 1953aac854edSJunchao Zhang factors->iU_h = MatRowMapKokkosViewHost(NoInit("iU_h"), m + 1); 1954aac854edSJunchao Zhang factors->jU_h = MatColIdxKokkosViewHost(NoInit("jU_h"), (Bdiag[0] - Bdiag[m])); 1955aac854edSJunchao Zhang factors->aU_h = MatScalarKokkosViewHost(NoInit("aU_h"), (Bdiag[0] - Bdiag[m])); 1956aac854edSJunchao Zhang 1957aac854edSJunchao Zhang PetscInt *Li = factors->iL_h.data(); 1958aac854edSJunchao Zhang PetscInt *Lj = factors->jL_h.data(); 1959aac854edSJunchao Zhang PetscInt *Ui = factors->iU_h.data(); 1960aac854edSJunchao Zhang PetscInt *Uj = factors->jU_h.data(); 1961aac854edSJunchao Zhang 1962aac854edSJunchao Zhang Li[0] = Ui[0] = 0; 1963aac854edSJunchao Zhang for (PetscInt i = 0; i < m; i++) { 1964aac854edSJunchao Zhang PetscInt llen = Bi[i + 1] - Bi[i]; // exclusive of the diagonal entry 1965aac854edSJunchao Zhang PetscInt ulen = Bdiag[i] - Bdiag[i + 1]; // inclusive of the diagonal entry 1966aac854edSJunchao Zhang 1967aac854edSJunchao Zhang PetscArraycpy(Lj + Li[i], Bj + Bi[i], llen); // entries of L on the left of the diagonal 1968aac854edSJunchao Zhang Lj[Li[i] + llen] = i; // diagonal entry of L 1969aac854edSJunchao Zhang 1970aac854edSJunchao Zhang Uj[Ui[i]] = i; // diagonal entry of U 1971aac854edSJunchao Zhang PetscArraycpy(Uj + Ui[i] + 1, Bj + Bdiag[i + 1] + 1, ulen - 1); // entries of U on the right of the diagonal 1972aac854edSJunchao Zhang 1973aac854edSJunchao Zhang Li[i + 1] = Li[i] + llen + 1; 1974aac854edSJunchao Zhang Ui[i + 1] = Ui[i] + ulen; 1975aac854edSJunchao Zhang } 1976aac854edSJunchao Zhang 1977aac854edSJunchao Zhang factors->iL_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->iL_h); 1978aac854edSJunchao Zhang factors->jL_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->jL_h); 1979aac854edSJunchao Zhang factors->iU_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->iU_h); 1980aac854edSJunchao Zhang factors->jU_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->jU_h); 1981aac854edSJunchao Zhang factors->aL_d = Kokkos::create_mirror_view(DefaultMemorySpace(), factors->aL_h); 1982aac854edSJunchao Zhang factors->aU_d = Kokkos::create_mirror_view(DefaultMemorySpace(), factors->aU_h); 1983aac854edSJunchao Zhang 1984aac854edSJunchao Zhang // Copy row/col permutation to device 1985aac854edSJunchao Zhang IS rowperm = ((Mat_SeqAIJ *)B->data)->row; 1986aac854edSJunchao Zhang PetscBool row_identity; 1987aac854edSJunchao Zhang PetscCall(ISIdentity(rowperm, &row_identity)); 1988aac854edSJunchao Zhang if (!row_identity) { 1989aac854edSJunchao Zhang const PetscInt *ip; 1990aac854edSJunchao Zhang 1991aac854edSJunchao Zhang PetscCall(ISGetIndices(rowperm, &ip)); 1992aac854edSJunchao Zhang factors->rowperm = PetscIntKokkosView(NoInit("rowperm"), m); 1993aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->rowperm, PetscIntKokkosViewHost(const_cast<PetscInt *>(ip), m))); 1994aac854edSJunchao Zhang PetscCall(ISRestoreIndices(rowperm, &ip)); 1995aac854edSJunchao Zhang PetscCall(PetscLogCpuToGpu(m * sizeof(PetscInt))); 1996aac854edSJunchao Zhang } 1997aac854edSJunchao Zhang 1998aac854edSJunchao Zhang IS colperm = ((Mat_SeqAIJ *)B->data)->col; 1999aac854edSJunchao Zhang PetscBool col_identity; 2000aac854edSJunchao Zhang PetscCall(ISIdentity(colperm, &col_identity)); 2001aac854edSJunchao Zhang if (!col_identity) { 2002aac854edSJunchao Zhang const PetscInt *ip; 2003aac854edSJunchao Zhang 2004aac854edSJunchao Zhang PetscCall(ISGetIndices(colperm, &ip)); 2005aac854edSJunchao Zhang factors->colperm = PetscIntKokkosView(NoInit("colperm"), n); 2006aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->colperm, PetscIntKokkosViewHost(const_cast<PetscInt *>(ip), n))); 2007aac854edSJunchao Zhang PetscCall(ISRestoreIndices(colperm, &ip)); 2008aac854edSJunchao Zhang PetscCall(PetscLogCpuToGpu(n * sizeof(PetscInt))); 2009aac854edSJunchao Zhang } 2010aac854edSJunchao Zhang 2011aac854edSJunchao Zhang /* Create sptrsv handles for L, U and their transpose */ 2012aac854edSJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE) 2013aac854edSJunchao Zhang auto sptrsv_alg = SPTRSVAlgorithm::SPTRSV_CUSPARSE; 2014aac854edSJunchao Zhang #else 2015aac854edSJunchao Zhang auto sptrsv_alg = SPTRSVAlgorithm::SEQLVLSCHD_TP1; 2016aac854edSJunchao Zhang #endif 2017aac854edSJunchao Zhang factors->khL.create_sptrsv_handle(sptrsv_alg, m, true /* L is lower tri */); 2018aac854edSJunchao Zhang factors->khU.create_sptrsv_handle(sptrsv_alg, m, false /* U is not lower tri */); 2019aac854edSJunchao Zhang factors->khLt.create_sptrsv_handle(sptrsv_alg, m, false /* L^T is not lower tri */); 2020aac854edSJunchao Zhang factors->khUt.create_sptrsv_handle(sptrsv_alg, m, true /* U^T is lower tri */); 2021aac854edSJunchao Zhang } 2022aac854edSJunchao Zhang 2023aac854edSJunchao Zhang // Copy the value 2024aac854edSJunchao Zhang for (PetscInt i = 0; i < m; i++) { 2025aac854edSJunchao Zhang PetscInt llen = Bi[i + 1] - Bi[i]; 2026aac854edSJunchao Zhang PetscInt ulen = Bdiag[i] - Bdiag[i + 1]; 2027aac854edSJunchao Zhang const PetscInt *Li = factors->iL_h.data(); 2028aac854edSJunchao Zhang const PetscInt *Ui = factors->iU_h.data(); 2029aac854edSJunchao Zhang 2030aac854edSJunchao Zhang PetscScalar *La = factors->aL_h.data(); 2031aac854edSJunchao Zhang PetscScalar *Ua = factors->aU_h.data(); 2032aac854edSJunchao Zhang 2033aac854edSJunchao Zhang PetscArraycpy(La + Li[i], Ba + Bi[i], llen); // entries of L 2034aac854edSJunchao Zhang La[Li[i] + llen] = 1.0; // diagonal entry 2035aac854edSJunchao Zhang 2036aac854edSJunchao Zhang Ua[Ui[i]] = 1.0 / Ba[Bdiag[i]]; // diagonal entry 2037aac854edSJunchao Zhang PetscArraycpy(Ua + Ui[i] + 1, Ba + Bdiag[i + 1] + 1, ulen - 1); // entries of U 2038aac854edSJunchao Zhang } 2039aac854edSJunchao Zhang 2040aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->aL_d, factors->aL_h)); 2041aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->aU_d, factors->aU_h)); 2042aac854edSJunchao Zhang // Once the factors' values have changed, we need to update their transpose and redo sptrsv symbolic 2043aac854edSJunchao Zhang factors->transpose_updated = PETSC_FALSE; 2044aac854edSJunchao Zhang factors->sptrsv_symbolic_completed = PETSC_FALSE; 2045aac854edSJunchao Zhang 2046aac854edSJunchao Zhang B->ops->solve = MatSolve_SeqAIJKokkos_LU; 2047aac854edSJunchao Zhang B->ops->solvetranspose = MatSolveTranspose_SeqAIJKokkos_LU; 2048aac854edSJunchao Zhang } 2049aac854edSJunchao Zhang 2050aac854edSJunchao Zhang B->ops->matsolve = NULL; 2051aac854edSJunchao Zhang B->ops->matsolvetranspose = NULL; 2052aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 2053aac854edSJunchao Zhang } 2054aac854edSJunchao Zhang 2055aac854edSJunchao Zhang static PetscErrorCode MatILUFactorNumeric_SeqAIJKokkos_ILU0(Mat B, Mat A, const MatFactorInfo *info) 2056d71ae5a4SJacob Faibussowitsch { 205786a27549SJunchao Zhang Mat_SeqAIJKokkos *aijkok = (Mat_SeqAIJKokkos *)A->spptr; 205886a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)B->spptr; 205986a27549SJunchao Zhang PetscInt fill_lev = info->levels; 206086a27549SJunchao Zhang 206186a27549SJunchao Zhang PetscFunctionBegin; 20629566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 2063aac854edSJunchao Zhang PetscCheck(!info->factoronhost, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "MatFactorInfo.factoronhost should be false"); 20649566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 2065076ba34aSJunchao Zhang 2066076ba34aSJunchao Zhang auto a_d = aijkok->a_dual.view_device(); 2067076ba34aSJunchao Zhang auto i_d = aijkok->i_dual.view_device(); 2068076ba34aSJunchao Zhang auto j_d = aijkok->j_dual.view_device(); 2069076ba34aSJunchao Zhang 2070aac854edSJunchao Zhang PetscCallCXX(spiluk_numeric(&factors->kh, fill_lev, i_d, j_d, a_d, factors->iL_d, factors->jL_d, factors->aL_d, factors->iU_d, factors->jU_d, factors->aU_d)); 207186a27549SJunchao Zhang 207286a27549SJunchao Zhang B->assembled = PETSC_TRUE; 207386a27549SJunchao Zhang B->preallocated = PETSC_TRUE; 2074aac854edSJunchao Zhang B->ops->solve = MatSolve_SeqAIJKokkos_LU; 2075aac854edSJunchao Zhang B->ops->solvetranspose = MatSolveTranspose_SeqAIJKokkos_LU; 207686a27549SJunchao Zhang B->ops->matsolve = NULL; 207786a27549SJunchao Zhang B->ops->matsolvetranspose = NULL; 207886a27549SJunchao Zhang 207986a27549SJunchao Zhang /* Once the factors' value changed, we need to update their transpose and sptrsv handle */ 208086a27549SJunchao Zhang factors->transpose_updated = PETSC_FALSE; 208186a27549SJunchao Zhang factors->sptrsv_symbolic_completed = PETSC_FALSE; 2082eeadb341SJunchao Zhang /* TODO: log flops, but how to know that? */ 20839566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 20843ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 208586a27549SJunchao Zhang } 208686a27549SJunchao Zhang 2087aac854edSJunchao Zhang // Use KK's spiluk_symbolic() to do ILU0 symbolic factorization, with no row/col reordering 2088aac854edSJunchao Zhang static PetscErrorCode MatILUFactorSymbolic_SeqAIJKokkos_ILU0(Mat B, Mat A, IS, IS, const MatFactorInfo *info) 2089d71ae5a4SJacob Faibussowitsch { 209086a27549SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 209186a27549SJunchao Zhang Mat_SeqAIJ *b; 209286a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)B->spptr; 209386a27549SJunchao Zhang PetscInt fill_lev = info->levels; 209486a27549SJunchao Zhang PetscInt nnzA = ((Mat_SeqAIJ *)A->data)->nz, nnzL, nnzU; 209586a27549SJunchao Zhang PetscInt n = A->rmap->n; 209686a27549SJunchao Zhang 209786a27549SJunchao Zhang PetscFunctionBegin; 2098aac854edSJunchao Zhang PetscCheck(!info->factoronhost, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "MatFactorInfo's factoronhost should be false as we are doing it on device right now"); 20999566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 210086a27549SJunchao Zhang 210186a27549SJunchao Zhang /* Create a spiluk handle and then do symbolic factorization */ 210286a27549SJunchao Zhang nnzL = nnzU = PetscRealIntMultTruncate(info->fill, nnzA); 2103aac854edSJunchao Zhang factors->kh.create_spiluk_handle(SPILUKAlgorithm::SEQLVLSCHD_TP1, n, nnzL, nnzU); 210486a27549SJunchao Zhang 210586a27549SJunchao Zhang auto spiluk_handle = factors->kh.get_spiluk_handle(); 210686a27549SJunchao Zhang 210786a27549SJunchao Zhang Kokkos::realloc(factors->iL_d, n + 1); /* Free old arrays and realloc */ 210886a27549SJunchao Zhang Kokkos::realloc(factors->jL_d, spiluk_handle->get_nnzL()); 210986a27549SJunchao Zhang Kokkos::realloc(factors->iU_d, n + 1); 211086a27549SJunchao Zhang Kokkos::realloc(factors->jU_d, spiluk_handle->get_nnzU()); 211186a27549SJunchao Zhang 211286a27549SJunchao Zhang aijkok = (Mat_SeqAIJKokkos *)A->spptr; 2113076ba34aSJunchao Zhang auto i_d = aijkok->i_dual.view_device(); 2114076ba34aSJunchao Zhang auto j_d = aijkok->j_dual.view_device(); 2115aac854edSJunchao Zhang PetscCallCXX(spiluk_symbolic(&factors->kh, fill_lev, i_d, j_d, factors->iL_d, factors->jL_d, factors->iU_d, factors->jU_d)); 211686a27549SJunchao Zhang /* TODO: if spiluk_symbolic is asynchronous, do we need to sync before calling get_nnzL()? */ 211786a27549SJunchao Zhang 211886a27549SJunchao Zhang Kokkos::resize(factors->jL_d, spiluk_handle->get_nnzL()); /* Shrink or expand, and retain old value */ 211986a27549SJunchao Zhang Kokkos::resize(factors->jU_d, spiluk_handle->get_nnzU()); 212086a27549SJunchao Zhang Kokkos::realloc(factors->aL_d, spiluk_handle->get_nnzL()); /* No need to retain old value */ 212186a27549SJunchao Zhang Kokkos::realloc(factors->aU_d, spiluk_handle->get_nnzU()); 212286a27549SJunchao Zhang 212386a27549SJunchao Zhang /* TODO: add options to select sptrsv algorithms */ 212486a27549SJunchao Zhang /* Create sptrsv handles for L, U and their transpose */ 212586a27549SJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE) 2126aac854edSJunchao Zhang auto sptrsv_alg = SPTRSVAlgorithm::SPTRSV_CUSPARSE; 212786a27549SJunchao Zhang #else 2128aac854edSJunchao Zhang auto sptrsv_alg = SPTRSVAlgorithm::SEQLVLSCHD_TP1; 212986a27549SJunchao Zhang #endif 213086a27549SJunchao Zhang 213186a27549SJunchao Zhang factors->khL.create_sptrsv_handle(sptrsv_alg, n, true /* L is lower tri */); 213286a27549SJunchao Zhang factors->khU.create_sptrsv_handle(sptrsv_alg, n, false /* U is not lower tri */); 213386a27549SJunchao Zhang factors->khLt.create_sptrsv_handle(sptrsv_alg, n, false /* L^T is not lower tri */); 213486a27549SJunchao Zhang factors->khUt.create_sptrsv_handle(sptrsv_alg, n, true /* U^T is lower tri */); 213586a27549SJunchao Zhang 213686a27549SJunchao Zhang /* Fill fields of the factor matrix B */ 21379566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(B, MAT_SKIP_ALLOCATION, NULL)); 213886a27549SJunchao Zhang b = (Mat_SeqAIJ *)B->data; 213986a27549SJunchao Zhang b->nz = b->maxnz = spiluk_handle->get_nnzL() + spiluk_handle->get_nnzU(); 214086a27549SJunchao Zhang B->info.fill_ratio_given = info->fill; 2141a1e4e190SStefano Zampini B->info.fill_ratio_needed = nnzA > 0 ? ((PetscReal)b->nz) / ((PetscReal)nnzA) : 1.0; 214286a27549SJunchao Zhang 2143aac854edSJunchao Zhang B->ops->lufactornumeric = MatILUFactorNumeric_SeqAIJKokkos_ILU0; 21443ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2145930e68a5SMark Adams } 2146930e68a5SMark Adams 2147aac854edSJunchao Zhang static PetscErrorCode MatLUFactorSymbolic_SeqAIJKokkos(Mat B, Mat A, IS isrow, IS iscol, const MatFactorInfo *info) 2148aac854edSJunchao Zhang { 2149aac854edSJunchao Zhang PetscFunctionBegin; 2150aac854edSJunchao Zhang PetscCall(MatLUFactorSymbolic_SeqAIJ(B, A, isrow, iscol, info)); 2151aac854edSJunchao Zhang PetscCheck(!B->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr"); 2152aac854edSJunchao Zhang PetscCallCXX(B->spptr = new Mat_SeqAIJKokkosTriFactors(B->rmap->n)); 2153aac854edSJunchao Zhang B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJKokkos; 2154aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 2155aac854edSJunchao Zhang } 2156aac854edSJunchao Zhang 2157aac854edSJunchao Zhang static PetscErrorCode MatILUFactorSymbolic_SeqAIJKokkos(Mat B, Mat A, IS isrow, IS iscol, const MatFactorInfo *info) 2158aac854edSJunchao Zhang { 2159aac854edSJunchao Zhang PetscBool row_identity = PETSC_FALSE, col_identity = PETSC_FALSE; 2160aac854edSJunchao Zhang 2161aac854edSJunchao Zhang PetscFunctionBegin; 2162aac854edSJunchao Zhang if (!info->factoronhost) { 2163aac854edSJunchao Zhang PetscCall(ISIdentity(isrow, &row_identity)); 2164aac854edSJunchao Zhang PetscCall(ISIdentity(iscol, &col_identity)); 2165aac854edSJunchao Zhang } 2166aac854edSJunchao Zhang 2167aac854edSJunchao Zhang PetscCheck(!B->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr"); 2168aac854edSJunchao Zhang PetscCallCXX(B->spptr = new Mat_SeqAIJKokkosTriFactors(B->rmap->n)); 2169aac854edSJunchao Zhang 2170aac854edSJunchao Zhang if (!info->factoronhost && !info->levels && row_identity && col_identity) { // if level 0 and no reordering 2171aac854edSJunchao Zhang PetscCall(MatILUFactorSymbolic_SeqAIJKokkos_ILU0(B, A, isrow, iscol, info)); 2172aac854edSJunchao Zhang } else { 2173aac854edSJunchao Zhang PetscCall(MatILUFactorSymbolic_SeqAIJ(B, A, isrow, iscol, info)); // otherwise, use PETSc's ILU on host 2174aac854edSJunchao Zhang B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJKokkos; 2175aac854edSJunchao Zhang } 2176aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 2177aac854edSJunchao Zhang } 2178aac854edSJunchao Zhang 2179aac854edSJunchao Zhang static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJKokkos(Mat B, Mat A, const MatFactorInfo *info) 2180aac854edSJunchao Zhang { 2181aac854edSJunchao Zhang PetscFunctionBegin; 2182aac854edSJunchao Zhang PetscCall(MatSeqAIJKokkosSyncHost(A)); 2183aac854edSJunchao Zhang PetscCall(MatCholeskyFactorNumeric_SeqAIJ(B, A, info)); 2184aac854edSJunchao Zhang 2185aac854edSJunchao Zhang if (!info->solveonhost) { // if solve on host, then we don't need to copy L, U to device 2186aac854edSJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors *)B->spptr; 2187aac854edSJunchao Zhang Mat_SeqAIJ *b = static_cast<Mat_SeqAIJ *>(B->data); 2188aac854edSJunchao Zhang const PetscInt *Bi = b->i, *Bj = b->j, *Bdiag = b->diag; 2189aac854edSJunchao Zhang const MatScalar *Ba = b->a; 2190aac854edSJunchao Zhang PetscInt m = B->rmap->n; 2191aac854edSJunchao Zhang 2192aac854edSJunchao Zhang if (factors->iU_h.extent(0) == 0) { // First time of numeric factorization 2193aac854edSJunchao Zhang // Allocate memory and copy the structure 2194aac854edSJunchao Zhang factors->iU_h = PetscIntKokkosViewHost(const_cast<PetscInt *>(Bi), m + 1); // wrap Bi as iU_h 2195aac854edSJunchao Zhang factors->jU_h = MatColIdxKokkosViewHost(NoInit("jU_h"), Bi[m]); 2196aac854edSJunchao Zhang factors->aU_h = MatScalarKokkosViewHost(NoInit("aU_h"), Bi[m]); 2197aac854edSJunchao Zhang factors->D_h = MatScalarKokkosViewHost(NoInit("D_h"), m); 2198aac854edSJunchao Zhang factors->aU_d = Kokkos::create_mirror_view(DefaultMemorySpace(), factors->aU_h); 2199aac854edSJunchao Zhang factors->D_d = Kokkos::create_mirror_view(DefaultMemorySpace(), factors->D_h); 2200aac854edSJunchao Zhang 2201aac854edSJunchao Zhang // Build jU_h from the skewed Aj 2202aac854edSJunchao Zhang PetscInt *Uj = factors->jU_h.data(); 2203aac854edSJunchao Zhang for (PetscInt i = 0; i < m; i++) { 2204aac854edSJunchao Zhang PetscInt ulen = Bi[i + 1] - Bi[i]; 2205aac854edSJunchao Zhang Uj[Bi[i]] = i; // diagonal entry 2206aac854edSJunchao Zhang PetscCall(PetscArraycpy(Uj + Bi[i] + 1, Bj + Bi[i], ulen - 1)); // entries of U on the right of the diagonal 2207aac854edSJunchao Zhang } 2208aac854edSJunchao Zhang 2209aac854edSJunchao Zhang // Copy iU, jU to device 2210aac854edSJunchao Zhang PetscCallCXX(factors->iU_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->iU_h)); 2211aac854edSJunchao Zhang PetscCallCXX(factors->jU_d = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(), factors->jU_h)); 2212aac854edSJunchao Zhang 2213aac854edSJunchao Zhang // Copy row/col permutation to device 2214aac854edSJunchao Zhang IS rowperm = ((Mat_SeqAIJ *)B->data)->row; 2215aac854edSJunchao Zhang PetscBool row_identity; 2216aac854edSJunchao Zhang PetscCall(ISIdentity(rowperm, &row_identity)); 2217aac854edSJunchao Zhang if (!row_identity) { 2218aac854edSJunchao Zhang const PetscInt *ip; 2219aac854edSJunchao Zhang 2220aac854edSJunchao Zhang PetscCall(ISGetIndices(rowperm, &ip)); 2221aac854edSJunchao Zhang PetscCallCXX(factors->rowperm = PetscIntKokkosView(NoInit("rowperm"), m)); 2222aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->rowperm, PetscIntKokkosViewHost(const_cast<PetscInt *>(ip), m))); 2223aac854edSJunchao Zhang PetscCall(ISRestoreIndices(rowperm, &ip)); 2224aac854edSJunchao Zhang PetscCall(PetscLogCpuToGpu(m * sizeof(PetscInt))); 2225aac854edSJunchao Zhang } 2226aac854edSJunchao Zhang 2227aac854edSJunchao Zhang // Create sptrsv handles for U and U^T 2228aac854edSJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE) 2229aac854edSJunchao Zhang auto sptrsv_alg = SPTRSVAlgorithm::SPTRSV_CUSPARSE; 2230aac854edSJunchao Zhang #else 2231aac854edSJunchao Zhang auto sptrsv_alg = SPTRSVAlgorithm::SEQLVLSCHD_TP1; 2232aac854edSJunchao Zhang #endif 2233aac854edSJunchao Zhang factors->khU.create_sptrsv_handle(sptrsv_alg, m, false /* U is not lower tri */); 2234aac854edSJunchao Zhang factors->khUt.create_sptrsv_handle(sptrsv_alg, m, true /* U^T is lower tri */); 2235aac854edSJunchao Zhang } 2236aac854edSJunchao Zhang // These pointers were set MatCholeskyFactorNumeric_SeqAIJ(), so we always need to update them 2237aac854edSJunchao Zhang B->ops->solve = MatSolve_SeqAIJKokkos_Cholesky; 2238aac854edSJunchao Zhang B->ops->solvetranspose = MatSolve_SeqAIJKokkos_Cholesky; 2239aac854edSJunchao Zhang 2240aac854edSJunchao Zhang // Copy the value 2241aac854edSJunchao Zhang PetscScalar *Ua = factors->aU_h.data(); 2242aac854edSJunchao Zhang PetscScalar *D = factors->D_h.data(); 2243aac854edSJunchao Zhang for (PetscInt i = 0; i < m; i++) { 2244aac854edSJunchao Zhang D[i] = Ba[Bdiag[i]]; // actually Aa[Adiag[i]] is the inverse of the diagonal 2245aac854edSJunchao Zhang Ua[Bi[i]] = (PetscScalar)1.0; // set the unit diagonal for U 2246aac854edSJunchao Zhang for (PetscInt k = 0; k < Bi[i + 1] - Bi[i] - 1; k++) Ua[Bi[i] + 1 + k] = -Ba[Bi[i] + k]; 2247aac854edSJunchao Zhang } 2248aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->aU_d, factors->aU_h)); 2249aac854edSJunchao Zhang PetscCallCXX(Kokkos::deep_copy(factors->D_d, factors->D_h)); 2250aac854edSJunchao Zhang 2251aac854edSJunchao Zhang factors->sptrsv_symbolic_completed = PETSC_FALSE; // When numeric value changed, we must do these again 2252aac854edSJunchao Zhang factors->transpose_updated = PETSC_FALSE; 2253aac854edSJunchao Zhang } 2254aac854edSJunchao Zhang 2255aac854edSJunchao Zhang B->ops->matsolve = NULL; 2256aac854edSJunchao Zhang B->ops->matsolvetranspose = NULL; 2257aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 2258aac854edSJunchao Zhang } 2259aac854edSJunchao Zhang 2260aac854edSJunchao Zhang static PetscErrorCode MatICCFactorSymbolic_SeqAIJKokkos(Mat B, Mat A, IS perm, const MatFactorInfo *info) 2261aac854edSJunchao Zhang { 2262aac854edSJunchao Zhang PetscFunctionBegin; 2263aac854edSJunchao Zhang if (info->solveonhost) { 2264aac854edSJunchao Zhang // If solve on host, we have to change the type, as eventually we need to call MatSolve_SeqSBAIJ_1_NaturalOrdering() etc. 2265aac854edSJunchao Zhang PetscCall(MatSetType(B, MATSEQSBAIJ)); 2266aac854edSJunchao Zhang PetscCall(MatSeqSBAIJSetPreallocation(B, 1, MAT_SKIP_ALLOCATION, NULL)); 2267aac854edSJunchao Zhang } 2268aac854edSJunchao Zhang 2269aac854edSJunchao Zhang PetscCall(MatICCFactorSymbolic_SeqAIJ(B, A, perm, info)); 2270aac854edSJunchao Zhang 2271aac854edSJunchao Zhang if (!info->solveonhost) { 2272bfe80ac4SPierre Jolivet // If solve on device, B is still a MATSEQAIJKOKKOS, so we are good to allocate B->spptr 2273aac854edSJunchao Zhang PetscCheck(!B->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr"); 2274aac854edSJunchao Zhang PetscCallCXX(B->spptr = new Mat_SeqAIJKokkosTriFactors(B->rmap->n)); 2275aac854edSJunchao Zhang B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJKokkos; 2276aac854edSJunchao Zhang } 2277aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 2278aac854edSJunchao Zhang } 2279aac854edSJunchao Zhang 2280aac854edSJunchao Zhang static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJKokkos(Mat B, Mat A, IS perm, const MatFactorInfo *info) 2281aac854edSJunchao Zhang { 2282aac854edSJunchao Zhang PetscFunctionBegin; 2283aac854edSJunchao Zhang if (info->solveonhost) { 2284aac854edSJunchao Zhang // If solve on host, we have to change the type, as eventually we need to call MatSolve_SeqSBAIJ_1_NaturalOrdering() etc. 2285aac854edSJunchao Zhang PetscCall(MatSetType(B, MATSEQSBAIJ)); 2286aac854edSJunchao Zhang PetscCall(MatSeqSBAIJSetPreallocation(B, 1, MAT_SKIP_ALLOCATION, NULL)); 2287aac854edSJunchao Zhang } 2288aac854edSJunchao Zhang 2289aac854edSJunchao Zhang PetscCall(MatCholeskyFactorSymbolic_SeqAIJ(B, A, perm, info)); // it sets B's two ISes ((Mat_SeqAIJ*)B->data)->{row, col} to perm 2290aac854edSJunchao Zhang 2291aac854edSJunchao Zhang if (!info->solveonhost) { 2292bfe80ac4SPierre Jolivet // If solve on device, B is still a MATSEQAIJKOKKOS, so we are good to allocate B->spptr 2293aac854edSJunchao Zhang PetscCheck(!B->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr"); 2294aac854edSJunchao Zhang PetscCallCXX(B->spptr = new Mat_SeqAIJKokkosTriFactors(B->rmap->n)); 2295aac854edSJunchao Zhang B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJKokkos; 2296aac854edSJunchao Zhang } 2297aac854edSJunchao Zhang PetscFunctionReturn(PETSC_SUCCESS); 2298aac854edSJunchao Zhang } 2299aac854edSJunchao Zhang 2300aac854edSJunchao Zhang // The _Kokkos suffix means we will use Kokkos as a solver for the SeqAIJKokkos matrix 2301aac854edSJunchao Zhang static PetscErrorCode MatFactorGetSolverType_SeqAIJKokkos_Kokkos(Mat A, MatSolverType *type) 2302d71ae5a4SJacob Faibussowitsch { 2303930e68a5SMark Adams PetscFunctionBegin; 2304930e68a5SMark Adams *type = MATSOLVERKOKKOS; 23053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2306930e68a5SMark Adams } 2307930e68a5SMark Adams 2308930e68a5SMark Adams /*MC 230986a27549SJunchao Zhang MATSOLVERKOKKOS = "Kokkos" - A matrix solver type providing triangular solvers for sequential matrices 231011a5261eSBarry Smith on a single GPU of type, `MATSEQAIJKOKKOS`, `MATAIJKOKKOS`. 2311930e68a5SMark Adams 2312930e68a5SMark Adams Level: beginner 2313930e68a5SMark Adams 23141cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `PCFactorSetMatSolverType()`, `MatSolverType`, `MatCreateSeqAIJKokkos()`, `MATAIJKOKKOS`, `MatKokkosSetFormat()`, `MatKokkosStorageFormat`, `MatKokkosFormatOperation` 2315930e68a5SMark Adams M*/ 231686a27549SJunchao Zhang PETSC_EXTERN PetscErrorCode MatGetFactor_SeqAIJKokkos_Kokkos(Mat A, MatFactorType ftype, Mat *B) /* MatGetFactor_<MatType>_<MatSolverType> */ 2317930e68a5SMark Adams { 2318930e68a5SMark Adams PetscInt n = A->rmap->n; 2319aac854edSJunchao Zhang MPI_Comm comm; 2320930e68a5SMark Adams 2321930e68a5SMark Adams PetscFunctionBegin; 2322aac854edSJunchao Zhang PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 2323aac854edSJunchao Zhang PetscCall(MatCreate(comm, B)); 23249566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*B, n, n, n, n)); 2325aac854edSJunchao Zhang PetscCall(MatSetBlockSizesFromMats(*B, A, A)); 2326930e68a5SMark Adams (*B)->factortype = ftype; 23279566063dSJacob Faibussowitsch PetscCall(MatSetType(*B, MATSEQAIJKOKKOS)); 23289566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation(*B, MAT_SKIP_ALLOCATION, NULL)); 2329aac854edSJunchao Zhang PetscCheck(!(*B)->spptr, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Expected a NULL spptr"); 2330aac854edSJunchao Zhang 2331aac854edSJunchao Zhang if (ftype == MAT_FACTOR_LU || ftype == MAT_FACTOR_ILU || ftype == MAT_FACTOR_ILUDT) { 2332aac854edSJunchao Zhang (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJKokkos; 2333aac854edSJunchao Zhang (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJKokkos; 2334aac854edSJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGND, (char **)&(*B)->preferredordering[MAT_FACTOR_LU])); 2335aac854edSJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGNATURAL, (char **)&(*B)->preferredordering[MAT_FACTOR_ILU])); 2336aac854edSJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGNATURAL, (char **)&(*B)->preferredordering[MAT_FACTOR_ILUDT])); 2337aac854edSJunchao Zhang } else if (ftype == MAT_FACTOR_CHOLESKY || ftype == MAT_FACTOR_ICC) { 2338aac854edSJunchao Zhang (*B)->ops->iccfactorsymbolic = MatICCFactorSymbolic_SeqAIJKokkos; 2339aac854edSJunchao Zhang (*B)->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SeqAIJKokkos; 2340aac854edSJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGND, (char **)&(*B)->preferredordering[MAT_FACTOR_CHOLESKY])); 2341aac854edSJunchao Zhang PetscCall(PetscStrallocpy(MATORDERINGNATURAL, (char **)&(*B)->preferredordering[MAT_FACTOR_ICC])); 2342aac854edSJunchao Zhang } else SETERRQ(comm, PETSC_ERR_SUP, "MatFactorType %s is not supported by MatType SeqAIJKokkos", MatFactorTypes[ftype]); 2343aac854edSJunchao Zhang 2344aac854edSJunchao Zhang // The factorization can use the ordering provided in MatLUFactorSymbolic(), MatCholeskyFactorSymbolic() etc, though we do it on host 2345aac854edSJunchao Zhang (*B)->canuseordering = PETSC_TRUE; 2346aac854edSJunchao Zhang PetscCall(PetscObjectComposeFunction((PetscObject)*B, "MatFactorGetSolverType_C", MatFactorGetSolverType_SeqAIJKokkos_Kokkos)); 23473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2348930e68a5SMark Adams } 23498f7e8f9dSMark Adams 2350aac854edSJunchao Zhang PETSC_INTERN PetscErrorCode MatSolverTypeRegister_Kokkos(void) 2351d71ae5a4SJacob Faibussowitsch { 235286a27549SJunchao Zhang PetscFunctionBegin; 23539566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS, MATSEQAIJKOKKOS, MAT_FACTOR_LU, MatGetFactor_SeqAIJKokkos_Kokkos)); 2354aac854edSJunchao Zhang PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS, MATSEQAIJKOKKOS, MAT_FACTOR_CHOLESKY, MatGetFactor_SeqAIJKokkos_Kokkos)); 23559566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS, MATSEQAIJKOKKOS, MAT_FACTOR_ILU, MatGetFactor_SeqAIJKokkos_Kokkos)); 2356aac854edSJunchao Zhang PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS, MATSEQAIJKOKKOS, MAT_FACTOR_ICC, MatGetFactor_SeqAIJKokkos_Kokkos)); 23573ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 235886a27549SJunchao Zhang } 235986a27549SJunchao Zhang 2360076ba34aSJunchao Zhang /* Utility to print out a KokkosCsrMatrix for debugging */ 2361d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode PrintCsrMatrix(const KokkosCsrMatrix &csrmat) 2362d71ae5a4SJacob Faibussowitsch { 236345402d8aSJunchao Zhang const auto &iv = Kokkos::create_mirror_view_and_copy(HostMirrorMemorySpace(), csrmat.graph.row_map); 236445402d8aSJunchao Zhang const auto &jv = Kokkos::create_mirror_view_and_copy(HostMirrorMemorySpace(), csrmat.graph.entries); 236545402d8aSJunchao Zhang const auto &av = Kokkos::create_mirror_view_and_copy(HostMirrorMemorySpace(), csrmat.values); 2366076ba34aSJunchao Zhang const PetscInt *i = iv.data(); 2367076ba34aSJunchao Zhang const PetscInt *j = jv.data(); 2368076ba34aSJunchao Zhang const PetscScalar *a = av.data(); 2369076ba34aSJunchao Zhang PetscInt m = csrmat.numRows(), n = csrmat.numCols(), nnz = csrmat.nnz(); 2370076ba34aSJunchao Zhang 2371076ba34aSJunchao Zhang PetscFunctionBegin; 23729566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF, "%" PetscInt_FMT " x %" PetscInt_FMT " SeqAIJKokkos, with %" PetscInt_FMT " nonzeros\n", m, n, nnz)); 2373076ba34aSJunchao Zhang for (PetscInt k = 0; k < m; k++) { 23749566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF, "%" PetscInt_FMT ": ", k)); 237548a46eb9SPierre Jolivet for (PetscInt p = i[k]; p < i[k + 1]; p++) PetscCall(PetscPrintf(PETSC_COMM_SELF, "%" PetscInt_FMT "(%.1f), ", j[p], (double)PetscRealPart(a[p]))); 23769566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF, "\n")); 2377076ba34aSJunchao Zhang } 23783ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2379076ba34aSJunchao Zhang } 2380