111d22bbfSJunchao Zhang #include <petscvec_kokkos.hpp> 2076ba34aSJunchao Zhang #include <petscpkg_version.h> 3152b3e56SJunchao Zhang #include <petsc/private/petscimpl.h> 442550becSJunchao Zhang #include <petsc/private/sfimpl.h> 58c3ff71bSJunchao Zhang #include <petscsystypes.h> 68c3ff71bSJunchao Zhang #include <petscerror.h> 78c3ff71bSJunchao Zhang 88c3ff71bSJunchao Zhang #include <Kokkos_Core.hpp> 9f0cf5187SStefano Zampini #include <KokkosBlas.hpp> 10076ba34aSJunchao Zhang #include <KokkosKernels_Sorting.hpp> 118c3ff71bSJunchao Zhang #include <KokkosSparse_CrsMatrix.hpp> 128c3ff71bSJunchao Zhang #include <KokkosSparse_spmv.hpp> 1386a27549SJunchao Zhang #include <KokkosSparse_spiluk.hpp> 1486a27549SJunchao Zhang #include <KokkosSparse_sptrsv.hpp> 15076ba34aSJunchao Zhang #include <KokkosSparse_spgemm.hpp> 16076ba34aSJunchao Zhang #include <KokkosSparse_spadd.hpp> 1786a27549SJunchao Zhang 1842550becSJunchao Zhang #include <../src/mat/impls/aij/seq/kokkos/aijkok.hpp> 198c3ff71bSJunchao Zhang 208c3ff71bSJunchao Zhang static PetscErrorCode MatSetOps_SeqAIJKokkos(Mat); /* Forward declaration */ 218c3ff71bSJunchao Zhang 22076ba34aSJunchao Zhang /* MatAssemblyEnd_SeqAIJKokkos() happens when we finalized nonzeros of the matrix, either after 23076ba34aSJunchao Zhang we assembled the matrix on host, or after we directly produced the matrix data on device (ex., through MatMatMult). 24076ba34aSJunchao Zhang In the latter case, it is important to set a_dual's sync state correctly. 25076ba34aSJunchao Zhang */ 268c3ff71bSJunchao Zhang static PetscErrorCode MatAssemblyEnd_SeqAIJKokkos(Mat A,MatAssemblyType mode) 278c3ff71bSJunchao Zhang { 28076ba34aSJunchao Zhang Mat_SeqAIJ *aijseq; 29076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 308c3ff71bSJunchao Zhang 318c3ff71bSJunchao Zhang PetscFunctionBegin; 32076ba34aSJunchao Zhang if (mode == MAT_FLUSH_ASSEMBLY) PetscFunctionReturn(0); 339566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd_SeqAIJ(A,mode)); 34076ba34aSJunchao Zhang 35076ba34aSJunchao Zhang aijseq = static_cast<Mat_SeqAIJ*>(A->data); 36076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 37076ba34aSJunchao Zhang 38076ba34aSJunchao Zhang /* If aijkok does not exist, we just copy i, j to device. 39076ba34aSJunchao Zhang If aijkok already exists, but the device's nonzero pattern does not match with the host's, we assume the latest data is on host. 40076ba34aSJunchao Zhang In both cases, we build a new aijkok structure. 41076ba34aSJunchao Zhang */ 42076ba34aSJunchao Zhang if (!aijkok || aijkok->nonzerostate != A->nonzerostate) { /* aijkok might not exist yet or nonzero pattern has changed */ 43076ba34aSJunchao Zhang delete aijkok; 44076ba34aSJunchao Zhang aijkok = new Mat_SeqAIJKokkos(A->rmap->n,A->cmap->n,aijseq->nz,aijseq->i,aijseq->j,aijseq->a,A->nonzerostate,PETSC_FALSE/*don't copy mat values to device*/); 45076ba34aSJunchao Zhang A->spptr = aijkok; 46076ba34aSJunchao Zhang } 47076ba34aSJunchao Zhang 485519a089SJose E. Roman if (aijkok->device_mat_d.data()) { 49a587d139SMark A->offloadmask = PETSC_OFFLOAD_GPU; // in GPU mode, no going back. MatSetValues checks this 50a587d139SMark } 518c3ff71bSJunchao Zhang PetscFunctionReturn(0); 528c3ff71bSJunchao Zhang } 538c3ff71bSJunchao Zhang 5486a27549SJunchao Zhang /* Sync CSR data to device if not yet */ 55076ba34aSJunchao Zhang PETSC_INTERN PetscErrorCode MatSeqAIJKokkosSyncDevice(Mat A) 568c3ff71bSJunchao Zhang { 578c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 588c3ff71bSJunchao Zhang 598c3ff71bSJunchao Zhang PetscFunctionBegin; 605f80ce2aSJacob Faibussowitsch PetscCheck(A->factortype == MAT_FACTOR_NONE,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Cann't sync factorized matrix from host to device"); 615f80ce2aSJacob Faibussowitsch PetscCheck(aijkok,PETSC_COMM_WORLD,PETSC_ERR_PLIB,"Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr"); 62076ba34aSJunchao Zhang if (aijkok->a_dual.need_sync_device()) { 63076ba34aSJunchao Zhang aijkok->a_dual.sync_device(); 64580c7c76SPierre Jolivet aijkok->transpose_updated = PETSC_FALSE; /* values of the transpose is out-of-date */ 6586a27549SJunchao Zhang aijkok->hermitian_updated = PETSC_FALSE; 668c3ff71bSJunchao Zhang } 678c3ff71bSJunchao Zhang PetscFunctionReturn(0); 688c3ff71bSJunchao Zhang } 698c3ff71bSJunchao Zhang 70076ba34aSJunchao Zhang /* Mark the CSR data on device as modified */ 71fc76dfabSMark Adams PETSC_INTERN PetscErrorCode MatSeqAIJKokkosModifyDevice(Mat A) 7286a27549SJunchao Zhang { 7386a27549SJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 7486a27549SJunchao Zhang 7586a27549SJunchao Zhang PetscFunctionBegin; 765f80ce2aSJacob Faibussowitsch PetscCheck(A->factortype == MAT_FACTOR_NONE,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Not supported for factorized matries"); 7786a27549SJunchao Zhang aijkok->a_dual.clear_sync_state(); 7886a27549SJunchao Zhang aijkok->a_dual.modify_device(); 7986a27549SJunchao Zhang aijkok->transpose_updated = PETSC_FALSE; 8086a27549SJunchao Zhang aijkok->hermitian_updated = PETSC_FALSE; 819566063dSJacob Faibussowitsch PetscCall(MatSeqAIJInvalidateDiagonal(A)); 829566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 8386a27549SJunchao Zhang PetscFunctionReturn(0); 8486a27549SJunchao Zhang } 8586a27549SJunchao Zhang 86f0cf5187SStefano Zampini static PetscErrorCode MatSeqAIJKokkosSyncHost(Mat A) 87f0cf5187SStefano Zampini { 88f0cf5187SStefano Zampini Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 89f0cf5187SStefano Zampini 90f0cf5187SStefano Zampini PetscFunctionBegin; 91f0cf5187SStefano Zampini PetscCheckTypeName(A,MATSEQAIJKOKKOS); 9286a27549SJunchao Zhang /* We do not expect one needs factors on host */ 935f80ce2aSJacob Faibussowitsch PetscCheck(A->factortype == MAT_FACTOR_NONE,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Cann't sync factorized matrix from device to host"); 945f80ce2aSJacob Faibussowitsch PetscCheck(aijkok,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing AIJKOK"); 95076ba34aSJunchao Zhang aijkok->a_dual.sync_host(); 96f0cf5187SStefano Zampini PetscFunctionReturn(0); 97f0cf5187SStefano Zampini } 98f0cf5187SStefano Zampini 99f0cf5187SStefano Zampini static PetscErrorCode MatSeqAIJGetArray_SeqAIJKokkos(Mat A,PetscScalar *array[]) 100f0cf5187SStefano Zampini { 101076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 102f0cf5187SStefano Zampini 103f0cf5187SStefano Zampini PetscFunctionBegin; 1045519a089SJose E. Roman /* aijkok contains valid pointers only if the host's nonzerostate matches with the device's. 1055519a089SJose E. Roman Calling MatSeqAIJSetPreallocation() or MatSetValues() on host, where aijseq->{i,j,a} might be 1065519a089SJose E. Roman reallocated, will lead to stale {i,j,a}_dual in aijkok. In both operations, the hosts's nonzerostate 1075519a089SJose E. Roman must have been updated. The stale aijkok will be rebuilt during MatAssemblyEnd. 1085519a089SJose E. Roman */ 1095519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) { 110076ba34aSJunchao Zhang aijkok->a_dual.sync_host(); 111076ba34aSJunchao Zhang *array = aijkok->a_dual.view_host().data(); 112076ba34aSJunchao Zhang } else { /* Happens when calling MatSetValues on a newly created matrix */ 113076ba34aSJunchao Zhang *array = static_cast<Mat_SeqAIJ*>(A->data)->a; 114076ba34aSJunchao Zhang } 115076ba34aSJunchao Zhang PetscFunctionReturn(0); 116076ba34aSJunchao Zhang } 117076ba34aSJunchao Zhang 118076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJRestoreArray_SeqAIJKokkos(Mat A,PetscScalar *array[]) 119076ba34aSJunchao Zhang { 120076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 121076ba34aSJunchao Zhang 122076ba34aSJunchao Zhang PetscFunctionBegin; 1235519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) aijkok->a_dual.modify_host(); 124076ba34aSJunchao Zhang PetscFunctionReturn(0); 125076ba34aSJunchao Zhang } 126076ba34aSJunchao Zhang 127076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJGetArrayRead_SeqAIJKokkos(Mat A,const PetscScalar *array[]) 128076ba34aSJunchao Zhang { 129076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 130076ba34aSJunchao Zhang 131076ba34aSJunchao Zhang PetscFunctionBegin; 1325519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) { 133076ba34aSJunchao Zhang aijkok->a_dual.sync_host(); 134076ba34aSJunchao Zhang *array = aijkok->a_dual.view_host().data(); 1352328674fSJunchao Zhang } else { 1362328674fSJunchao Zhang *array = static_cast<Mat_SeqAIJ*>(A->data)->a; 1372328674fSJunchao Zhang } 138076ba34aSJunchao Zhang PetscFunctionReturn(0); 139076ba34aSJunchao Zhang } 140076ba34aSJunchao Zhang 141076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJRestoreArrayRead_SeqAIJKokkos(Mat A,const PetscScalar *array[]) 142076ba34aSJunchao Zhang { 143076ba34aSJunchao Zhang PetscFunctionBegin; 144076ba34aSJunchao Zhang *array = NULL; 145076ba34aSJunchao Zhang PetscFunctionReturn(0); 146076ba34aSJunchao Zhang } 147076ba34aSJunchao Zhang 148076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJGetArrayWrite_SeqAIJKokkos(Mat A,PetscScalar *array[]) 149076ba34aSJunchao Zhang { 150076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 151076ba34aSJunchao Zhang 152076ba34aSJunchao Zhang PetscFunctionBegin; 1535519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) { 154076ba34aSJunchao Zhang *array = aijkok->a_dual.view_host().data(); 1552328674fSJunchao Zhang } else { /* Ex. happens with MatZeroEntries on a preallocated but not assembled matrix */ 1562328674fSJunchao Zhang *array = static_cast<Mat_SeqAIJ*>(A->data)->a; 1572328674fSJunchao Zhang } 158076ba34aSJunchao Zhang PetscFunctionReturn(0); 159076ba34aSJunchao Zhang } 160076ba34aSJunchao Zhang 161076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJRestoreArrayWrite_SeqAIJKokkos(Mat A,PetscScalar *array[]) 162076ba34aSJunchao Zhang { 163076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 164076ba34aSJunchao Zhang 165076ba34aSJunchao Zhang PetscFunctionBegin; 1665519a089SJose E. Roman if (aijkok && A->nonzerostate == aijkok->nonzerostate) { 167076ba34aSJunchao Zhang aijkok->a_dual.clear_sync_state(); 168076ba34aSJunchao Zhang aijkok->a_dual.modify_host(); 1692328674fSJunchao Zhang } 170f0cf5187SStefano Zampini PetscFunctionReturn(0); 171f0cf5187SStefano Zampini } 172f0cf5187SStefano Zampini 1737ee59b9bSJunchao Zhang static PetscErrorCode MatSeqAIJGetCSRAndMemType_SeqAIJKokkos(Mat A,const PetscInt **i,const PetscInt **j,PetscScalar **a,PetscMemType *mtype) 1747ee59b9bSJunchao Zhang { 1757ee59b9bSJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 1767ee59b9bSJunchao Zhang 1777ee59b9bSJunchao Zhang PetscFunctionBegin; 1787ee59b9bSJunchao Zhang PetscCheck(aijkok != NULL,PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONGSTATE,"aijkok is NULL"); 1797ee59b9bSJunchao Zhang 1807ee59b9bSJunchao Zhang if (i) *i = aijkok->i_device_data(); 1817ee59b9bSJunchao Zhang if (j) *j = aijkok->j_device_data(); 1827ee59b9bSJunchao Zhang if (a) { 1837ee59b9bSJunchao Zhang aijkok->a_dual.sync_device(); 1847ee59b9bSJunchao Zhang *a = aijkok->a_device_data(); 1857ee59b9bSJunchao Zhang } 1867ee59b9bSJunchao Zhang if (mtype) *mtype = PETSC_MEMTYPE_KOKKOS; 1877ee59b9bSJunchao Zhang PetscFunctionReturn(0); 1887ee59b9bSJunchao Zhang } 1897ee59b9bSJunchao Zhang 190a587d139SMark // MatSeqAIJKokkosSetDeviceMat takes a PetscSplitCSRDataStructure with device data and copies it to the device. Note, "deep_copy" here is really a shallow copy 191042217e8SBarry Smith PetscErrorCode MatSeqAIJKokkosSetDeviceMat(Mat A, PetscSplitCSRDataStructure h_mat) 192a587d139SMark { 193042217e8SBarry Smith Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 194042217e8SBarry Smith Kokkos::View<SplitCSRMat, Kokkos::HostSpace> h_mat_k(h_mat); 195a587d139SMark 196a587d139SMark PetscFunctionBegin; 1975f80ce2aSJacob Faibussowitsch PetscCheck(aijkok,PETSC_COMM_WORLD,PETSC_ERR_PLIB,"Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr"); 198152b3e56SJunchao Zhang aijkok->device_mat_d = create_mirror(DefaultMemorySpace(),h_mat_k); 199a587d139SMark Kokkos::deep_copy (aijkok->device_mat_d, h_mat_k); 200a587d139SMark PetscFunctionReturn(0); 201a587d139SMark } 202a587d139SMark 203a587d139SMark // MatSeqAIJKokkosGetDeviceMat gets the device if it is here, otherwise it creates a place for it and returns NULL 204042217e8SBarry Smith PetscErrorCode MatSeqAIJKokkosGetDeviceMat(Mat A, PetscSplitCSRDataStructure *d_mat) 205a587d139SMark { 206042217e8SBarry Smith Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 207a587d139SMark 208a587d139SMark PetscFunctionBegin; 209a587d139SMark if (aijkok && aijkok->device_mat_d.data()) { 210a587d139SMark *d_mat = aijkok->device_mat_d.data(); 211a587d139SMark } else { 2129566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); // create aijkok (we are making d_mat now so make a place for it) 213a587d139SMark *d_mat = NULL; 214a587d139SMark } 215a587d139SMark PetscFunctionReturn(0); 216a587d139SMark } 217076ba34aSJunchao Zhang 218076ba34aSJunchao Zhang /* Generate the transpose on device and cache it internally */ 219076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJKokkosGenerateTranspose_Private(Mat A, KokkosCsrMatrix **csrmatT) 220152b3e56SJunchao Zhang { 221152b3e56SJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 222152b3e56SJunchao Zhang 223152b3e56SJunchao Zhang PetscFunctionBegin; 2245f80ce2aSJacob Faibussowitsch PetscCheck(aijkok,PETSC_COMM_WORLD,PETSC_ERR_PLIB,"Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr"); 225076ba34aSJunchao Zhang if (!aijkok->csrmatT.nnz() || !aijkok->transpose_updated) { /* Generate At for the first time OR just update its values */ 226076ba34aSJunchao Zhang /* FIXME: KK does not separate symbolic/numeric transpose. We could have a permutation array to help value-only update */ 2279566063dSJacob Faibussowitsch PetscCallCXX(aijkok->a_dual.sync_device()); 2289566063dSJacob Faibussowitsch PetscCallCXX(aijkok->csrmatT = KokkosKernels::Impl::transpose_matrix(aijkok->csrmat)); 2299566063dSJacob Faibussowitsch PetscCallCXX(KokkosKernels::sort_crs_matrix(aijkok->csrmatT)); 23086a27549SJunchao Zhang aijkok->transpose_updated = PETSC_TRUE; 231076ba34aSJunchao Zhang } 232076ba34aSJunchao Zhang *csrmatT = &aijkok->csrmatT; 233152b3e56SJunchao Zhang PetscFunctionReturn(0); 234152b3e56SJunchao Zhang } 235152b3e56SJunchao Zhang 236076ba34aSJunchao Zhang /* Generate the Hermitian on device and cache it internally */ 237076ba34aSJunchao Zhang static PetscErrorCode MatSeqAIJKokkosGenerateHermitian_Private(Mat A, KokkosCsrMatrix **csrmatH) 238152b3e56SJunchao Zhang { 239152b3e56SJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 240152b3e56SJunchao Zhang 241152b3e56SJunchao Zhang PetscFunctionBegin; 2429566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 2435f80ce2aSJacob Faibussowitsch PetscCheck(aijkok,PETSC_COMM_WORLD,PETSC_ERR_PLIB,"Unexpected NULL (Mat_SeqAIJKokkos*)A->spptr"); 244076ba34aSJunchao Zhang if (!aijkok->csrmatH.nnz() || !aijkok->hermitian_updated) { /* Generate Ah for the first time OR just update its values */ 2459566063dSJacob Faibussowitsch PetscCallCXX(aijkok->a_dual.sync_device()); 2469566063dSJacob Faibussowitsch PetscCallCXX(aijkok->csrmatH = KokkosKernels::Impl::transpose_matrix(aijkok->csrmat)); 2479566063dSJacob Faibussowitsch PetscCallCXX(KokkosKernels::sort_crs_matrix(aijkok->csrmatH)); 248076ba34aSJunchao Zhang #if defined(PETSC_USE_COMPLEX) 249076ba34aSJunchao Zhang const auto& a = aijkok->csrmatH.values; 250076ba34aSJunchao Zhang Kokkos::parallel_for(a.extent(0),KOKKOS_LAMBDA(MatRowMapType i) {a(i) = PetscConj(a(i));}); 251076ba34aSJunchao Zhang #endif 25286a27549SJunchao Zhang aijkok->hermitian_updated = PETSC_TRUE; 253076ba34aSJunchao Zhang } 254076ba34aSJunchao Zhang *csrmatH = &aijkok->csrmatH; 2559566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 256152b3e56SJunchao Zhang PetscFunctionReturn(0); 257152b3e56SJunchao Zhang } 258a587d139SMark 2598c3ff71bSJunchao Zhang /* y = A x */ 2608c3ff71bSJunchao Zhang static PetscErrorCode MatMult_SeqAIJKokkos(Mat A,Vec xx,Vec yy) 2618c3ff71bSJunchao Zhang { 2628c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 263152b3e56SJunchao Zhang ConstPetscScalarKokkosView xv; 264152b3e56SJunchao Zhang PetscScalarKokkosView yv; 2658c3ff71bSJunchao Zhang 2668c3ff71bSJunchao Zhang PetscFunctionBegin; 2679566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 2689566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 2699566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx,&xv)); 2709566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(yy,&yv)); 2718c3ff71bSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 272152b3e56SJunchao Zhang KokkosSparse::spmv("N",1.0/*alpha*/,aijkok->csrmat,xv,0.0/*beta*/,yv); /* y = alpha A x + beta y */ 2739566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx,&xv)); 2749566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(yy,&yv)); 275076ba34aSJunchao Zhang /* 2.0*nnz - numRows seems more accurate here but assumes there are no zero-rows. So a little sloppy here. */ 2769566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0*aijkok->csrmat.nnz())); 2779566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 2788c3ff71bSJunchao Zhang PetscFunctionReturn(0); 2798c3ff71bSJunchao Zhang } 2808c3ff71bSJunchao Zhang 2818c3ff71bSJunchao Zhang /* y = A^T x */ 2828c3ff71bSJunchao Zhang static PetscErrorCode MatMultTranspose_SeqAIJKokkos(Mat A,Vec xx,Vec yy) 2838c3ff71bSJunchao Zhang { 2848c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 285152b3e56SJunchao Zhang const char *mode; 286152b3e56SJunchao Zhang ConstPetscScalarKokkosView xv; 287152b3e56SJunchao Zhang PetscScalarKokkosView yv; 288076ba34aSJunchao Zhang KokkosCsrMatrix *csrmat; 2898c3ff71bSJunchao Zhang 2908c3ff71bSJunchao Zhang PetscFunctionBegin; 2919566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 2929566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 2939566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx,&xv)); 2949566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(yy,&yv)); 295152b3e56SJunchao Zhang if (A->form_explicit_transpose) { 2969566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A,&csrmat)); 297152b3e56SJunchao Zhang mode = "N"; 298152b3e56SJunchao Zhang } else { 299076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 300076ba34aSJunchao Zhang csrmat = &aijkok->csrmat; 301152b3e56SJunchao Zhang mode = "T"; 302152b3e56SJunchao Zhang } 303076ba34aSJunchao Zhang KokkosSparse::spmv(mode,1.0/*alpha*/,*csrmat,xv,0.0/*beta*/,yv); /* y = alpha A^T x + beta y */ 3049566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx,&xv)); 3059566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(yy,&yv)); 3069566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0*csrmat->nnz())); 3079566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 3088c3ff71bSJunchao Zhang PetscFunctionReturn(0); 3098c3ff71bSJunchao Zhang } 3108c3ff71bSJunchao Zhang 3118c3ff71bSJunchao Zhang /* y = A^H x */ 3128c3ff71bSJunchao Zhang static PetscErrorCode MatMultHermitianTranspose_SeqAIJKokkos(Mat A,Vec xx,Vec yy) 3138c3ff71bSJunchao Zhang { 3148c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 315152b3e56SJunchao Zhang const char *mode; 316152b3e56SJunchao Zhang ConstPetscScalarKokkosView xv; 317152b3e56SJunchao Zhang PetscScalarKokkosView yv; 318076ba34aSJunchao Zhang KokkosCsrMatrix *csrmat; 3198c3ff71bSJunchao Zhang 3208c3ff71bSJunchao Zhang PetscFunctionBegin; 3219566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 3229566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 3239566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx,&xv)); 3249566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(yy,&yv)); 325152b3e56SJunchao Zhang if (A->form_explicit_transpose) { 3269566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateHermitian_Private(A,&csrmat)); 327152b3e56SJunchao Zhang mode = "N"; 328152b3e56SJunchao Zhang } else { 329076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 330076ba34aSJunchao Zhang csrmat = &aijkok->csrmat; 331152b3e56SJunchao Zhang mode = "C"; 332152b3e56SJunchao Zhang } 333076ba34aSJunchao Zhang KokkosSparse::spmv(mode,1.0/*alpha*/,*csrmat,xv,0.0/*beta*/,yv); /* y = alpha A^H x + beta y */ 3349566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx,&xv)); 3359566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(yy,&yv)); 3369566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0*csrmat->nnz())); 3379566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 3388c3ff71bSJunchao Zhang PetscFunctionReturn(0); 3398c3ff71bSJunchao Zhang } 3408c3ff71bSJunchao Zhang 3418c3ff71bSJunchao Zhang /* z = A x + y */ 3428c3ff71bSJunchao Zhang static PetscErrorCode MatMultAdd_SeqAIJKokkos(Mat A,Vec xx,Vec yy, Vec zz) 3438c3ff71bSJunchao Zhang { 3448c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 345152b3e56SJunchao Zhang ConstPetscScalarKokkosView xv,yv; 346152b3e56SJunchao Zhang PetscScalarKokkosView zv; 3478c3ff71bSJunchao Zhang 3488c3ff71bSJunchao Zhang PetscFunctionBegin; 3499566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 3509566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 3519566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx,&xv)); 3529566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(yy,&yv)); 3539566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(zz,&zv)); 3548c3ff71bSJunchao Zhang if (zz != yy) Kokkos::deep_copy(zv,yv); 3558c3ff71bSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 356152b3e56SJunchao Zhang KokkosSparse::spmv("N",1.0/*alpha*/,aijkok->csrmat,xv,1.0/*beta*/,zv); /* z = alpha A x + beta z */ 3579566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx,&xv)); 3589566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(yy,&yv)); 3599566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(zz,&zv)); 3609566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0*aijkok->csrmat.nnz())); 3619566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 3628c3ff71bSJunchao Zhang PetscFunctionReturn(0); 3638c3ff71bSJunchao Zhang } 3648c3ff71bSJunchao Zhang 3658c3ff71bSJunchao Zhang /* z = A^T x + y */ 3668c3ff71bSJunchao Zhang static PetscErrorCode MatMultTransposeAdd_SeqAIJKokkos(Mat A,Vec xx,Vec yy,Vec zz) 3678c3ff71bSJunchao Zhang { 3688c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 369152b3e56SJunchao Zhang const char *mode; 370152b3e56SJunchao Zhang ConstPetscScalarKokkosView xv,yv; 371152b3e56SJunchao Zhang PetscScalarKokkosView zv; 372076ba34aSJunchao Zhang KokkosCsrMatrix *csrmat; 3738c3ff71bSJunchao Zhang 3748c3ff71bSJunchao Zhang PetscFunctionBegin; 3759566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 3769566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 3779566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx,&xv)); 3789566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(yy,&yv)); 3799566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(zz,&zv)); 3808c3ff71bSJunchao Zhang if (zz != yy) Kokkos::deep_copy(zv,yv); 381152b3e56SJunchao Zhang if (A->form_explicit_transpose) { 3829566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A,&csrmat)); 383152b3e56SJunchao Zhang mode = "N"; 384152b3e56SJunchao Zhang } else { 385076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 386076ba34aSJunchao Zhang csrmat = &aijkok->csrmat; 387152b3e56SJunchao Zhang mode = "T"; 388152b3e56SJunchao Zhang } 389076ba34aSJunchao Zhang KokkosSparse::spmv(mode,1.0/*alpha*/,*csrmat,xv,1.0/*beta*/,zv); /* z = alpha A^T x + beta z */ 3909566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx,&xv)); 3919566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(yy,&yv)); 3929566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(zz,&zv)); 3939566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0*csrmat->nnz())); 3949566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 3958c3ff71bSJunchao Zhang PetscFunctionReturn(0); 3968c3ff71bSJunchao Zhang } 3978c3ff71bSJunchao Zhang 3988c3ff71bSJunchao Zhang /* z = A^H x + y */ 3998c3ff71bSJunchao Zhang static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJKokkos(Mat A,Vec xx,Vec yy,Vec zz) 4008c3ff71bSJunchao Zhang { 4018c3ff71bSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 402152b3e56SJunchao Zhang const char *mode; 403152b3e56SJunchao Zhang ConstPetscScalarKokkosView xv,yv; 404152b3e56SJunchao Zhang PetscScalarKokkosView zv; 405076ba34aSJunchao Zhang KokkosCsrMatrix *csrmat; 4068c3ff71bSJunchao Zhang 4078c3ff71bSJunchao Zhang PetscFunctionBegin; 4089566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 4099566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 4109566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(xx,&xv)); 4119566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(yy,&yv)); 4129566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(zz,&zv)); 4138c3ff71bSJunchao Zhang if (zz != yy) Kokkos::deep_copy(zv,yv); 414152b3e56SJunchao Zhang if (A->form_explicit_transpose) { 4159566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateHermitian_Private(A,&csrmat)); 416152b3e56SJunchao Zhang mode = "N"; 417152b3e56SJunchao Zhang } else { 418076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 419076ba34aSJunchao Zhang csrmat = &aijkok->csrmat; 420152b3e56SJunchao Zhang mode = "C"; 421152b3e56SJunchao Zhang } 422076ba34aSJunchao Zhang KokkosSparse::spmv(mode,1.0/*alpha*/,*csrmat,xv,1.0/*beta*/,zv); /* z = alpha A^H x + beta z */ 4239566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(xx,&xv)); 4249566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(yy,&yv)); 4259566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(zz,&zv)); 4269566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(2.0*csrmat->nnz())); 4279566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 428152b3e56SJunchao Zhang PetscFunctionReturn(0); 429152b3e56SJunchao Zhang } 430152b3e56SJunchao Zhang 431152b3e56SJunchao Zhang PetscErrorCode MatSetOption_SeqAIJKokkos(Mat A,MatOption op,PetscBool flg) 432152b3e56SJunchao Zhang { 433152b3e56SJunchao Zhang Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 434152b3e56SJunchao Zhang 435152b3e56SJunchao Zhang PetscFunctionBegin; 436152b3e56SJunchao Zhang switch (op) { 437152b3e56SJunchao Zhang case MAT_FORM_EXPLICIT_TRANSPOSE: 438152b3e56SJunchao Zhang /* need to destroy the transpose matrix if present to prevent from logic errors if flg is set to true later */ 4399566063dSJacob Faibussowitsch if (A->form_explicit_transpose && !flg && aijkok) PetscCall(aijkok->DestroyMatTranspose()); 440152b3e56SJunchao Zhang A->form_explicit_transpose = flg; 441152b3e56SJunchao Zhang break; 442152b3e56SJunchao Zhang default: 4439566063dSJacob Faibussowitsch PetscCall(MatSetOption_SeqAIJ(A,op,flg)); 444152b3e56SJunchao Zhang break; 445152b3e56SJunchao Zhang } 4468c3ff71bSJunchao Zhang PetscFunctionReturn(0); 4478c3ff71bSJunchao Zhang } 4488c3ff71bSJunchao Zhang 449076ba34aSJunchao Zhang /* Depending on reuse, either build a new mat, or use the existing mat */ 4503d0639e7SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJKokkos(Mat A, MatType mtype, MatReuse reuse, Mat* newmat) 4518c3ff71bSJunchao Zhang { 452076ba34aSJunchao Zhang Mat_SeqAIJ *aseq; 4538c3ff71bSJunchao Zhang 4548c3ff71bSJunchao Zhang PetscFunctionBegin; 4559566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 456076ba34aSJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { /* Build a brand new mat */ 4579566063dSJacob Faibussowitsch PetscCall(MatDuplicate(A,MAT_COPY_VALUES,newmat)); /* the returned newmat is a SeqAIJKokkos */ 4588c3ff71bSJunchao Zhang } else if (reuse == MAT_REUSE_MATRIX) { /* Reuse the mat created before */ 4599566063dSJacob Faibussowitsch PetscCall(MatCopy(A,*newmat,SAME_NONZERO_PATTERN)); /* newmat is already a SeqAIJKokkos */ 460076ba34aSJunchao Zhang } else if (reuse == MAT_INPLACE_MATRIX) { /* newmat is A */ 4615f80ce2aSJacob Faibussowitsch PetscCheck(A == *newmat,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"A != *newmat with MAT_INPLACE_MATRIX"); 4629566063dSJacob Faibussowitsch PetscCall(PetscFree(A->defaultvectype)); 4639566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(VECKOKKOS,&A->defaultvectype)); /* Allocate and copy the string */ 4649566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)A,MATSEQAIJKOKKOS)); 4659566063dSJacob Faibussowitsch PetscCall(MatSetOps_SeqAIJKokkos(A)); 466076ba34aSJunchao Zhang aseq = static_cast<Mat_SeqAIJ*>(A->data); 467394ed5ebSJunchao Zhang if (A->assembled) { /* Copy i, j (but not values) to device for an assembled matrix if not yet */ 4685f80ce2aSJacob Faibussowitsch PetscCheck(!A->spptr,PETSC_COMM_WORLD,PETSC_ERR_PLIB,"Expect NULL (Mat_SeqAIJKokkos*)A->spptr"); 469076ba34aSJunchao Zhang A->spptr = new Mat_SeqAIJKokkos(A->rmap->n,A->cmap->n,aseq->nz,aseq->i,aseq->j,aseq->a,A->nonzerostate,PETSC_FALSE); 4708c3ff71bSJunchao Zhang } 471076ba34aSJunchao Zhang } 4728c3ff71bSJunchao Zhang PetscFunctionReturn(0); 4738c3ff71bSJunchao Zhang } 4748c3ff71bSJunchao Zhang 475076ba34aSJunchao Zhang /* MatDuplicate always creates a new matrix. MatDuplicate can be called either on an assembled matrix or 476076ba34aSJunchao Zhang an unassembled matrix, even though MAT_COPY_VALUES is not allowed for unassembled matrix. 477076ba34aSJunchao Zhang */ 478076ba34aSJunchao Zhang static PetscErrorCode MatDuplicate_SeqAIJKokkos(Mat A,MatDuplicateOption dupOption,Mat *B) 4798c3ff71bSJunchao Zhang { 480076ba34aSJunchao Zhang Mat_SeqAIJ *bseq; 481076ba34aSJunchao Zhang Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos*>(A->spptr),*bkok; 482076ba34aSJunchao Zhang Mat mat; 4838c3ff71bSJunchao Zhang 4848c3ff71bSJunchao Zhang PetscFunctionBegin; 485076ba34aSJunchao Zhang /* Do not copy values on host as A's latest values might be on device. We don't want to do sync blindly */ 4869566063dSJacob Faibussowitsch PetscCall(MatDuplicate_SeqAIJ(A,MAT_DO_NOT_COPY_VALUES,B)); 487076ba34aSJunchao Zhang mat = *B; 488076ba34aSJunchao Zhang if (A->assembled) { 489076ba34aSJunchao Zhang bseq = static_cast<Mat_SeqAIJ*>(mat->data); 490076ba34aSJunchao Zhang bkok = new Mat_SeqAIJKokkos(mat->rmap->n,mat->cmap->n,bseq->nz,bseq->i,bseq->j,bseq->a,mat->nonzerostate,PETSC_FALSE); 491076ba34aSJunchao Zhang bkok->a_dual.clear_sync_state(); /* Clear B's sync state as it will be decided below */ 492076ba34aSJunchao Zhang /* Now copy values to B if needed */ 493076ba34aSJunchao Zhang if (dupOption == MAT_COPY_VALUES) { 494076ba34aSJunchao Zhang if (akok->a_dual.need_sync_device()) { 495076ba34aSJunchao Zhang Kokkos::deep_copy(bkok->a_dual.view_host(),akok->a_dual.view_host()); 496076ba34aSJunchao Zhang bkok->a_dual.modify_host(); 497076ba34aSJunchao Zhang } else { /* If device has the latest data, we only copy data on device */ 498076ba34aSJunchao Zhang Kokkos::deep_copy(bkok->a_dual.view_device(),akok->a_dual.view_device()); 499076ba34aSJunchao Zhang bkok->a_dual.modify_device(); 500076ba34aSJunchao Zhang } 501076ba34aSJunchao Zhang } else { /* MAT_DO_NOT_COPY_VALUES or MAT_SHARE_NONZERO_PATTERN. B's values should be zeroed */ 502076ba34aSJunchao Zhang /* B's values on host should be already zeroed by MatDuplicate_SeqAIJ() */ 503076ba34aSJunchao Zhang bkok->a_dual.modify_host(); 504076ba34aSJunchao Zhang } 505076ba34aSJunchao Zhang mat->spptr = bkok; 506076ba34aSJunchao Zhang } 507076ba34aSJunchao Zhang 5089566063dSJacob Faibussowitsch PetscCall(PetscFree(mat->defaultvectype)); 5099566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(VECKOKKOS,&mat->defaultvectype)); /* Allocate and copy the string */ 5109566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat,MATSEQAIJKOKKOS)); 5119566063dSJacob Faibussowitsch PetscCall(MatSetOps_SeqAIJKokkos(mat)); 5128c3ff71bSJunchao Zhang PetscFunctionReturn(0); 5138c3ff71bSJunchao Zhang } 5148c3ff71bSJunchao Zhang 5150ecb592aSJunchao Zhang static PetscErrorCode MatTranspose_SeqAIJKokkos(Mat A,MatReuse reuse,Mat *B) 5160ecb592aSJunchao Zhang { 5170ecb592aSJunchao Zhang Mat At; 518ff751488SJunchao Zhang KokkosCsrMatrix *internT; 5190ecb592aSJunchao Zhang Mat_SeqAIJKokkos *atkok,*bkok; 5200ecb592aSJunchao Zhang 5210ecb592aSJunchao Zhang PetscFunctionBegin; 5229566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A,&internT)); /* Generate a transpose internally */ 5230ecb592aSJunchao Zhang if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { 524ff751488SJunchao Zhang /* Deep copy internT, as we want to isolate the internal transpose */ 5259566063dSJacob Faibussowitsch PetscCallCXX(atkok = new Mat_SeqAIJKokkos(KokkosCsrMatrix("csrmat",*internT))); 5269566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PetscObjectComm((PetscObject)A),atkok,&At)); 5270ecb592aSJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) *B = At; 5289566063dSJacob Faibussowitsch else PetscCall(MatHeaderReplace(A,&At)); /* Replace A with At inplace */ 5290ecb592aSJunchao Zhang } else { /* MAT_REUSE_MATRIX, just need to copy values to B on device */ 5300ecb592aSJunchao Zhang if ((*B)->assembled) { 5310ecb592aSJunchao Zhang bkok = static_cast<Mat_SeqAIJKokkos*>((*B)->spptr); 5329566063dSJacob Faibussowitsch PetscCallCXX(Kokkos::deep_copy(bkok->a_dual.view_device(),internT->values)); 5339566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(*B)); 5340ecb592aSJunchao Zhang } else if ((*B)->preallocated) { /* It is ok for B to be only preallocated, as needed in MatTranspose_MPIAIJ */ 5350ecb592aSJunchao Zhang Mat_SeqAIJ *bseq = static_cast<Mat_SeqAIJ*>((*B)->data); 5360ecb592aSJunchao Zhang MatScalarKokkosViewHost a_h(bseq->a,internT->nnz()); /* bseq->nz = 0 if unassembled */ 5370ecb592aSJunchao Zhang MatColIdxKokkosViewHost j_h(bseq->j,internT->nnz()); 5389566063dSJacob Faibussowitsch PetscCallCXX(Kokkos::deep_copy(a_h,internT->values)); 5399566063dSJacob Faibussowitsch PetscCallCXX(Kokkos::deep_copy(j_h,internT->graph.entries)); 5400ecb592aSJunchao Zhang } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONGSTATE,"B must be assembled or preallocated"); 5410ecb592aSJunchao Zhang } 5420ecb592aSJunchao Zhang PetscFunctionReturn(0); 5430ecb592aSJunchao Zhang } 5440ecb592aSJunchao Zhang 5458c3ff71bSJunchao Zhang static PetscErrorCode MatDestroy_SeqAIJKokkos(Mat A) 5468c3ff71bSJunchao Zhang { 54786a27549SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 5488c3ff71bSJunchao Zhang 5498c3ff71bSJunchao Zhang PetscFunctionBegin; 55086a27549SJunchao Zhang if (A->factortype == MAT_FACTOR_NONE) { 55186a27549SJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 5528c3ff71bSJunchao Zhang delete aijkok; 55386a27549SJunchao Zhang } else { 55486a27549SJunchao Zhang delete static_cast<Mat_SeqAIJKokkosTriFactors*>(A->spptr); 55586a27549SJunchao Zhang } 556cbc6b225SStefano Zampini A->spptr = NULL; 5579566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL)); 5589566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL)); 5599566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL)); 5609566063dSJacob Faibussowitsch PetscCall(MatDestroy_SeqAIJ(A)); 5618c3ff71bSJunchao Zhang PetscFunctionReturn(0); 5628c3ff71bSJunchao Zhang } 5638c3ff71bSJunchao Zhang 5643f3ba80aSJunchao Zhang /*MC 5653f3ba80aSJunchao Zhang MATSEQAIJKOKKOS - MATAIJKOKKOS = "(seq)aijkokkos" - A matrix type to be used for sparse matrices with Kokkos 5663f3ba80aSJunchao Zhang 5673f3ba80aSJunchao Zhang A matrix type type using Kokkos-Kernels CrsMatrix type for portability across different device types 5683f3ba80aSJunchao Zhang 5693f3ba80aSJunchao Zhang Options Database Keys: 5703f3ba80aSJunchao Zhang . -mat_type aijkokkos - sets the matrix type to "aijkokkos" during a call to MatSetFromOptions() 5713f3ba80aSJunchao Zhang 5723f3ba80aSJunchao Zhang Level: beginner 5733f3ba80aSJunchao Zhang 574db781477SPatrick Sanan .seealso: `MatCreateSeqAIJKokkos()`, `MATMPIAIJKOKKOS` 5753f3ba80aSJunchao Zhang M*/ 57686a27549SJunchao Zhang PETSC_EXTERN PetscErrorCode MatCreate_SeqAIJKokkos(Mat A) 57786a27549SJunchao Zhang { 57886a27549SJunchao Zhang PetscFunctionBegin; 5799566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 5809566063dSJacob Faibussowitsch PetscCall(MatCreate_SeqAIJ(A)); 5819566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqAIJKokkos(A,MATSEQAIJKOKKOS,MAT_INPLACE_MATRIX,&A)); 58286a27549SJunchao Zhang PetscFunctionReturn(0); 58386a27549SJunchao Zhang } 58486a27549SJunchao Zhang 585076ba34aSJunchao Zhang /* Merge A, B into a matrix C. A is put before B. C's size would be A->rmap->n by (A->cmap->n + B->cmap->n) */ 586076ba34aSJunchao Zhang PetscErrorCode MatSeqAIJKokkosMergeMats(Mat A,Mat B,MatReuse reuse,Mat* C) 587a3f881fbSStefano Zampini { 588076ba34aSJunchao Zhang Mat_SeqAIJ *a,*b; 589076ba34aSJunchao Zhang Mat_SeqAIJKokkos *akok,*bkok,*ckok; 590076ba34aSJunchao Zhang MatScalarKokkosView aa,ba,ca; 591076ba34aSJunchao Zhang MatRowMapKokkosView ai,bi,ci; 592076ba34aSJunchao Zhang MatColIdxKokkosView aj,bj,cj; 593076ba34aSJunchao Zhang PetscInt m,n,nnz,aN; 594a3f881fbSStefano Zampini 595a3f881fbSStefano Zampini PetscFunctionBegin; 596076ba34aSJunchao Zhang PetscValidHeaderSpecific(A,MAT_CLASSID,1); 597076ba34aSJunchao Zhang PetscValidHeaderSpecific(B,MAT_CLASSID,2); 598076ba34aSJunchao Zhang PetscValidPointer(C,4); 599076ba34aSJunchao Zhang PetscCheckTypeName(A,MATSEQAIJKOKKOS); 600076ba34aSJunchao Zhang PetscCheckTypeName(B,MATSEQAIJKOKKOS); 6015f80ce2aSJacob Faibussowitsch PetscCheck(A->rmap->n == B->rmap->n,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %" PetscInt_FMT " != %" PetscInt_FMT,A->rmap->n,B->rmap->n); 6025f80ce2aSJacob Faibussowitsch PetscCheck(reuse != MAT_INPLACE_MATRIX,PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_INPLACE_MATRIX not supported"); 603076ba34aSJunchao Zhang 6049566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 6059566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(B)); 606076ba34aSJunchao Zhang a = static_cast<Mat_SeqAIJ*>(A->data); 607076ba34aSJunchao Zhang b = static_cast<Mat_SeqAIJ*>(B->data); 608076ba34aSJunchao Zhang akok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 609076ba34aSJunchao Zhang bkok = static_cast<Mat_SeqAIJKokkos*>(B->spptr); 610076ba34aSJunchao Zhang aa = akok->a_dual.view_device(); 611076ba34aSJunchao Zhang ai = akok->i_dual.view_device(); 612076ba34aSJunchao Zhang ba = bkok->a_dual.view_device(); 613076ba34aSJunchao Zhang bi = bkok->i_dual.view_device(); 614076ba34aSJunchao Zhang m = A->rmap->n; /* M, N and nnz of C */ 615076ba34aSJunchao Zhang n = A->cmap->n + B->cmap->n; 616076ba34aSJunchao Zhang nnz = a->nz + b->nz; 617076ba34aSJunchao Zhang aN = A->cmap->n; /* N of A */ 618076ba34aSJunchao Zhang if (reuse == MAT_INITIAL_MATRIX) { 619076ba34aSJunchao Zhang aj = akok->j_dual.view_device(); 620076ba34aSJunchao Zhang bj = bkok->j_dual.view_device(); 621076ba34aSJunchao Zhang auto ca_dual = MatScalarKokkosDualView("a",aa.extent(0)+ba.extent(0)); 622076ba34aSJunchao Zhang auto ci_dual = MatRowMapKokkosDualView("i",ai.extent(0)); 623076ba34aSJunchao Zhang auto cj_dual = MatColIdxKokkosDualView("j",aj.extent(0)+bj.extent(0)); 624076ba34aSJunchao Zhang ca = ca_dual.view_device(); 625076ba34aSJunchao Zhang ci = ci_dual.view_device(); 626076ba34aSJunchao Zhang cj = cj_dual.view_device(); 627076ba34aSJunchao Zhang 628076ba34aSJunchao Zhang /* Concatenate A and B in parallel using Kokkos hierarchical parallelism */ 629076ba34aSJunchao Zhang Kokkos::parallel_for(Kokkos::TeamPolicy<>(m, Kokkos::AUTO()),KOKKOS_LAMBDA(const KokkosTeamMemberType& t) { 630076ba34aSJunchao Zhang PetscInt i = t.league_rank(); /* row i */ 631076ba34aSJunchao Zhang PetscInt coffset = ai(i) + bi(i), alen = ai(i+1)-ai(i), blen = bi(i+1)-bi(i); 632076ba34aSJunchao Zhang 633076ba34aSJunchao Zhang Kokkos::single(Kokkos::PerTeam(t), [=]() { /* this side effect only happens once per whole team */ 634076ba34aSJunchao Zhang ci(i) = coffset; 635076ba34aSJunchao Zhang if (i == m-1) ci(m) = ai(m) + bi(m); 636076ba34aSJunchao Zhang }); 637076ba34aSJunchao Zhang 638076ba34aSJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(t, alen+blen), [&](PetscInt k) { 639076ba34aSJunchao Zhang if (k < alen) { 640076ba34aSJunchao Zhang ca(coffset+k) = aa(ai(i)+k); 641076ba34aSJunchao Zhang cj(coffset+k) = aj(ai(i)+k); 642076ba34aSJunchao Zhang } else { 643076ba34aSJunchao Zhang ca(coffset+k) = ba(bi(i)+k-alen); 644076ba34aSJunchao Zhang cj(coffset+k) = bj(bi(i)+k-alen) + aN; /* Entries in B get new column indices in C */ 645076ba34aSJunchao Zhang } 646076ba34aSJunchao Zhang }); 647076ba34aSJunchao Zhang }); 648076ba34aSJunchao Zhang ca_dual.modify_device(); 649076ba34aSJunchao Zhang ci_dual.modify_device(); 650076ba34aSJunchao Zhang cj_dual.modify_device(); 6519566063dSJacob Faibussowitsch PetscCallCXX(ckok = new Mat_SeqAIJKokkos(m,n,nnz,ci_dual,cj_dual,ca_dual)); 6529566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF,ckok,C)); 653076ba34aSJunchao Zhang } else if (reuse == MAT_REUSE_MATRIX) { 654076ba34aSJunchao Zhang PetscValidHeaderSpecific(*C,MAT_CLASSID,4); 655076ba34aSJunchao Zhang PetscCheckTypeName(*C,MATSEQAIJKOKKOS); 656076ba34aSJunchao Zhang ckok = static_cast<Mat_SeqAIJKokkos*>((*C)->spptr); 657076ba34aSJunchao Zhang ca = ckok->a_dual.view_device(); 658076ba34aSJunchao Zhang ci = ckok->i_dual.view_device(); 659076ba34aSJunchao Zhang 660076ba34aSJunchao Zhang Kokkos::parallel_for(Kokkos::TeamPolicy<>(m, Kokkos::AUTO()),KOKKOS_LAMBDA(const KokkosTeamMemberType& t) { 661076ba34aSJunchao Zhang PetscInt i = t.league_rank(); /* row i */ 662076ba34aSJunchao Zhang PetscInt alen = ai(i+1)-ai(i), blen = bi(i+1)-bi(i); 663076ba34aSJunchao Zhang Kokkos::parallel_for(Kokkos::TeamThreadRange(t, alen+blen), [&](PetscInt k) { 664076ba34aSJunchao Zhang if (k < alen) ca(ci(i)+k) = aa(ai(i)+k); 665076ba34aSJunchao Zhang else ca(ci(i)+k) = ba(bi(i)+k-alen); 666076ba34aSJunchao Zhang }); 667076ba34aSJunchao Zhang }); 6689566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(*C)); 669076ba34aSJunchao Zhang } 670076ba34aSJunchao Zhang PetscFunctionReturn(0); 671076ba34aSJunchao Zhang } 672076ba34aSJunchao Zhang 673076ba34aSJunchao Zhang static PetscErrorCode MatProductDataDestroy_SeqAIJKokkos(void* pdata) 674076ba34aSJunchao Zhang { 675076ba34aSJunchao Zhang PetscFunctionBegin; 676076ba34aSJunchao Zhang delete static_cast<MatProductData_SeqAIJKokkos*>(pdata); 677a3f881fbSStefano Zampini PetscFunctionReturn(0); 678a3f881fbSStefano Zampini } 679a3f881fbSStefano Zampini 680a3f881fbSStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJKokkos_SeqAIJKokkos(Mat C) 681a3f881fbSStefano Zampini { 682a3f881fbSStefano Zampini Mat_Product *product = C->product; 683a3f881fbSStefano Zampini Mat A,B; 684076ba34aSJunchao Zhang bool transA,transB; /* use bool, since KK needs this type */ 685a3f881fbSStefano Zampini Mat_SeqAIJKokkos *akok,*bkok,*ckok; 686a3f881fbSStefano Zampini Mat_SeqAIJ *c; 687076ba34aSJunchao Zhang MatProductData_SeqAIJKokkos *pdata; 688076ba34aSJunchao Zhang KokkosCsrMatrix *csrmatA,*csrmatB; 689a3f881fbSStefano Zampini 690a3f881fbSStefano Zampini PetscFunctionBegin; 691a3f881fbSStefano Zampini MatCheckProduct(C,1); 6925f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty"); 693076ba34aSJunchao Zhang pdata = static_cast<MatProductData_SeqAIJKokkos*>(C->product->data); 694076ba34aSJunchao Zhang 695076ba34aSJunchao Zhang if (pdata->reusesym) { /* We reached here through e.g., MatMatMult(A,B,MAT_INITIAL_MATRIX,..,C), where symbolic/numeric are combined */ 696076ba34aSJunchao Zhang pdata->reusesym = PETSC_FALSE; /* So that next time when user calls MatMatMult(E,F,MAT_REUSE_MATRIX,..,C), we still do numeric */ 697076ba34aSJunchao Zhang PetscFunctionReturn(0); 698076ba34aSJunchao Zhang } 699076ba34aSJunchao Zhang 700076ba34aSJunchao Zhang switch (product->type) { 701076ba34aSJunchao Zhang case MATPRODUCT_AB: transA = false; transB = false; break; 702076ba34aSJunchao Zhang case MATPRODUCT_AtB: transA = true; transB = false; break; 703076ba34aSJunchao Zhang case MATPRODUCT_ABt: transA = false; transB = true; break; 704076ba34aSJunchao Zhang default: 70598921bdaSJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Unsupported product type %s",MatProductTypes[product->type]); 706076ba34aSJunchao Zhang } 707076ba34aSJunchao Zhang 708a3f881fbSStefano Zampini A = product->A; 709a3f881fbSStefano Zampini B = product->B; 7109566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 7119566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(B)); 712a3f881fbSStefano Zampini akok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 713a3f881fbSStefano Zampini bkok = static_cast<Mat_SeqAIJKokkos*>(B->spptr); 714a3f881fbSStefano Zampini ckok = static_cast<Mat_SeqAIJKokkos*>(C->spptr); 715076ba34aSJunchao Zhang 7165f80ce2aSJacob Faibussowitsch PetscCheck(ckok,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Device data structure spptr is empty"); 717076ba34aSJunchao Zhang 718076ba34aSJunchao Zhang csrmatA = &akok->csrmat; 719076ba34aSJunchao Zhang csrmatB = &bkok->csrmat; 720076ba34aSJunchao Zhang 721076ba34aSJunchao Zhang /* TODO: Once KK spgemm implements transpose, we can get rid of the explicit transpose here */ 722076ba34aSJunchao Zhang if (transA) { 7239566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A,&csrmatA)); 724076ba34aSJunchao Zhang transA = false; 725a3f881fbSStefano Zampini } 726a3f881fbSStefano Zampini 727076ba34aSJunchao Zhang if (transB) { 7289566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(B,&csrmatB)); 729076ba34aSJunchao Zhang transB = false; 730076ba34aSJunchao Zhang } 7319566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 7329566063dSJacob Faibussowitsch PetscCallCXX(KokkosSparse::spgemm_numeric(pdata->kh,*csrmatA,transA,*csrmatB,transB,ckok->csrmat)); 7339566063dSJacob Faibussowitsch PetscCallCXX(KokkosKernels::sort_crs_matrix(ckok->csrmat)); /* without the sort, mat_tests-ex62_14_seqaijkokkos failed */ 7349566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 7359566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(C)); 736a3f881fbSStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 737a3f881fbSStefano Zampini c = (Mat_SeqAIJ*)C->data; 7389566063dSJacob Faibussowitsch PetscCall(PetscInfo(C,"Matrix size: %" PetscInt_FMT " X %" PetscInt_FMT "; storage space: 0 unneeded,%" PetscInt_FMT " used\n",C->rmap->n,C->cmap->n,c->nz)); 7399566063dSJacob Faibussowitsch PetscCall(PetscInfo(C,"Number of mallocs during MatSetValues() is 0\n")); 7409566063dSJacob Faibussowitsch PetscCall(PetscInfo(C,"Maximum nonzeros in any row is %" PetscInt_FMT "\n",c->rmax)); 741a3f881fbSStefano Zampini c->reallocs = 0; 742076ba34aSJunchao Zhang C->info.mallocs = 0; 743a3f881fbSStefano Zampini C->info.nz_unneeded = 0; 744a3f881fbSStefano Zampini C->assembled = C->was_assembled = PETSC_TRUE; 745a3f881fbSStefano Zampini C->num_ass++; 746a3f881fbSStefano Zampini PetscFunctionReturn(0); 747a3f881fbSStefano Zampini } 748a3f881fbSStefano Zampini 749a3f881fbSStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJKokkos_SeqAIJKokkos(Mat C) 750a3f881fbSStefano Zampini { 751076ba34aSJunchao Zhang Mat_Product *product = C->product; 752076ba34aSJunchao Zhang MatProductType ptype; 753076ba34aSJunchao Zhang Mat A,B; 754076ba34aSJunchao Zhang bool transA,transB; 755076ba34aSJunchao Zhang Mat_SeqAIJKokkos *akok,*bkok,*ckok; 756076ba34aSJunchao Zhang MatProductData_SeqAIJKokkos *pdata; 757076ba34aSJunchao Zhang MPI_Comm comm; 758076ba34aSJunchao Zhang KokkosCsrMatrix *csrmatA,*csrmatB,csrmatC; 759a3f881fbSStefano Zampini 760a3f881fbSStefano Zampini PetscFunctionBegin; 761a3f881fbSStefano Zampini MatCheckProduct(C,1); 7629566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C,&comm)); 7635f80ce2aSJacob Faibussowitsch PetscCheck(!product->data,comm,PETSC_ERR_PLIB,"Product data not empty"); 764a3f881fbSStefano Zampini A = product->A; 765a3f881fbSStefano Zampini B = product->B; 7669566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 7679566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(B)); 768a3f881fbSStefano Zampini akok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 769a3f881fbSStefano Zampini bkok = static_cast<Mat_SeqAIJKokkos*>(B->spptr); 770076ba34aSJunchao Zhang csrmatA = &akok->csrmat; 771076ba34aSJunchao Zhang csrmatB = &bkok->csrmat; 772076ba34aSJunchao Zhang 773a3f881fbSStefano Zampini ptype = product->type; 774a3f881fbSStefano Zampini switch (ptype) { 775076ba34aSJunchao Zhang case MATPRODUCT_AB: transA = false; transB = false; break; 776076ba34aSJunchao Zhang case MATPRODUCT_AtB: transA = true; transB = false; break; 777076ba34aSJunchao Zhang case MATPRODUCT_ABt: transA = false; transB = true; break; 778a3f881fbSStefano Zampini default: 77998921bdaSJacob Faibussowitsch SETERRQ(comm,PETSC_ERR_PLIB,"Unsupported product type %s",MatProductTypes[product->type]); 780a3f881fbSStefano Zampini } 781a3f881fbSStefano Zampini 782076ba34aSJunchao Zhang product->data = pdata = new MatProductData_SeqAIJKokkos(); 783076ba34aSJunchao Zhang pdata->kh.set_team_work_size(16); 784076ba34aSJunchao Zhang pdata->kh.set_dynamic_scheduling(true); 785076ba34aSJunchao Zhang pdata->reusesym = product->api_user; 786a3f881fbSStefano Zampini 787076ba34aSJunchao Zhang /* TODO: add command line options to select spgemm algorithms */ 788076ba34aSJunchao Zhang auto spgemm_alg = KokkosSparse::SPGEMMAlgorithm::SPGEMM_KK; 7896ffb9508SJunchao Zhang /* CUDA-10.2's spgemm has bugs. As as of 2022-01-19, KK does not support CUDA-11.x's newer spgemm API. 7906ffb9508SJunchao Zhang We can default to SPGEMMAlgorithm::SPGEMM_CUSPARSE with CUDA-11+ when KK adds the support. 7916ffb9508SJunchao Zhang */ 792076ba34aSJunchao Zhang pdata->kh.create_spgemm_handle(spgemm_alg); 793076ba34aSJunchao Zhang 7949566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 795076ba34aSJunchao Zhang /* TODO: Get rid of the explicit transpose once KK-spgemm implements the transpose option */ 796076ba34aSJunchao Zhang if (transA) { 7979566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(A,&csrmatA)); 798076ba34aSJunchao Zhang transA = false; 799076ba34aSJunchao Zhang } 800076ba34aSJunchao Zhang 801076ba34aSJunchao Zhang if (transB) { 8029566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosGenerateTranspose_Private(B,&csrmatB)); 803076ba34aSJunchao Zhang transB = false; 804076ba34aSJunchao Zhang } 805076ba34aSJunchao Zhang 8069566063dSJacob Faibussowitsch PetscCallCXX(KokkosSparse::spgemm_symbolic(pdata->kh,*csrmatA,transA,*csrmatB,transB,csrmatC)); 807076ba34aSJunchao Zhang /* spgemm_symbolic() only populates C's rowmap, but not C's column indices. 808076ba34aSJunchao Zhang So we have to do a fake spgemm_numeric() here to get csrmatC.j_d setup, before 809076ba34aSJunchao Zhang calling new Mat_SeqAIJKokkos(). 810076ba34aSJunchao Zhang TODO: Remove the fake spgemm_numeric() after KK fixed this problem. 811076ba34aSJunchao Zhang */ 8129566063dSJacob Faibussowitsch PetscCallCXX(KokkosSparse::spgemm_numeric(pdata->kh,*csrmatA,transA,*csrmatB,transB,csrmatC)); 8139566063dSJacob Faibussowitsch PetscCallCXX(KokkosKernels::sort_crs_matrix(csrmatC)); 8149566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 815076ba34aSJunchao Zhang 8169566063dSJacob Faibussowitsch PetscCallCXX(ckok = new Mat_SeqAIJKokkos(csrmatC)); 8179566063dSJacob Faibussowitsch PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(C,ckok)); 818076ba34aSJunchao Zhang C->product->destroy = MatProductDataDestroy_SeqAIJKokkos; 819a3f881fbSStefano Zampini PetscFunctionReturn(0); 820a3f881fbSStefano Zampini } 821a3f881fbSStefano Zampini 822a3f881fbSStefano Zampini /* handles sparse matrix matrix ops */ 823076ba34aSJunchao Zhang static PetscErrorCode MatProductSetFromOptions_SeqAIJKokkos(Mat mat) 824a3f881fbSStefano Zampini { 825076ba34aSJunchao Zhang Mat_Product *product = mat->product; 826a3f881fbSStefano Zampini PetscBool Biskok = PETSC_FALSE,Ciskok = PETSC_TRUE; 827a3f881fbSStefano Zampini 828a3f881fbSStefano Zampini PetscFunctionBegin; 829a3f881fbSStefano Zampini MatCheckProduct(mat,1); 8309566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)product->B,MATSEQAIJKOKKOS,&Biskok)); 831a3f881fbSStefano Zampini if (product->type == MATPRODUCT_ABC) { 8329566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)product->C,MATSEQAIJKOKKOS,&Ciskok)); 833a3f881fbSStefano Zampini } 834a3f881fbSStefano Zampini if (Biskok && Ciskok) { 835a3f881fbSStefano Zampini switch (product->type) { 836a3f881fbSStefano Zampini case MATPRODUCT_AB: 837a3f881fbSStefano Zampini case MATPRODUCT_AtB: 838a3f881fbSStefano Zampini case MATPRODUCT_ABt: 839a3f881fbSStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJKokkos_SeqAIJKokkos; 840a3f881fbSStefano Zampini break; 841a3f881fbSStefano Zampini case MATPRODUCT_PtAP: 842a3f881fbSStefano Zampini case MATPRODUCT_RARt: 843a3f881fbSStefano Zampini case MATPRODUCT_ABC: 844a3f881fbSStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 845a3f881fbSStefano Zampini break; 846a3f881fbSStefano Zampini default: 847a3f881fbSStefano Zampini break; 848a3f881fbSStefano Zampini } 849a3f881fbSStefano Zampini } else { /* fallback for AIJ */ 8509566063dSJacob Faibussowitsch PetscCall(MatProductSetFromOptions_SeqAIJ(mat)); 851a3f881fbSStefano Zampini } 852a3f881fbSStefano Zampini PetscFunctionReturn(0); 853a3f881fbSStefano Zampini } 854a587d139SMark 855f0cf5187SStefano Zampini static PetscErrorCode MatScale_SeqAIJKokkos(Mat A, PetscScalar a) 856f0cf5187SStefano Zampini { 857f0cf5187SStefano Zampini Mat_SeqAIJKokkos *aijkok; 858f0cf5187SStefano Zampini 859f0cf5187SStefano Zampini PetscFunctionBegin; 8609566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 8619566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 862f0cf5187SStefano Zampini aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 863076ba34aSJunchao Zhang KokkosBlas::scal(aijkok->a_dual.view_device(),a,aijkok->a_dual.view_device()); 8649566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(A)); 8659566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(aijkok->a_dual.extent(0))); 8669566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 867f0cf5187SStefano Zampini PetscFunctionReturn(0); 868f0cf5187SStefano Zampini } 869f0cf5187SStefano Zampini 870a587d139SMark static PetscErrorCode MatZeroEntries_SeqAIJKokkos(Mat A) 871a587d139SMark { 872076ba34aSJunchao Zhang Mat_SeqAIJKokkos *aijkok; 873a587d139SMark 874a587d139SMark PetscFunctionBegin; 875076ba34aSJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 8762328674fSJunchao Zhang if (aijkok) { /* Only zero the device if data is already there */ 877076ba34aSJunchao Zhang KokkosBlas::fill(aijkok->a_dual.view_device(),0.0); 8789566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(A)); 8792328674fSJunchao Zhang } else { /* Might be preallocated but not assembled */ 8809566063dSJacob Faibussowitsch PetscCall(MatZeroEntries_SeqAIJ(A)); 8812328674fSJunchao Zhang } 882a587d139SMark PetscFunctionReturn(0); 883a587d139SMark } 884a587d139SMark 885db78de30SJunchao Zhang /* Get a Kokkos View from a mat of type MatSeqAIJKokkos */ 88642550becSJunchao Zhang PetscErrorCode MatSeqAIJGetKokkosView(Mat A,ConstMatScalarKokkosView* kv) 887db78de30SJunchao Zhang { 888db78de30SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 889db78de30SJunchao Zhang 890db78de30SJunchao Zhang PetscFunctionBegin; 891db78de30SJunchao Zhang PetscValidHeaderSpecific(A,MAT_CLASSID,1); 892db78de30SJunchao Zhang PetscValidPointer(kv,2); 893db78de30SJunchao Zhang PetscCheckTypeName(A,MATSEQAIJKOKKOS); 8949566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 895db78de30SJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 896076ba34aSJunchao Zhang *kv = aijkok->a_dual.view_device(); 897db78de30SJunchao Zhang PetscFunctionReturn(0); 898db78de30SJunchao Zhang } 899db78de30SJunchao Zhang 90042550becSJunchao Zhang PetscErrorCode MatSeqAIJRestoreKokkosView(Mat A,ConstMatScalarKokkosView* kv) 901db78de30SJunchao Zhang { 902db78de30SJunchao Zhang PetscFunctionBegin; 903db78de30SJunchao Zhang PetscValidHeaderSpecific(A,MAT_CLASSID,1); 904db78de30SJunchao Zhang PetscValidPointer(kv,2); 905db78de30SJunchao Zhang PetscCheckTypeName(A,MATSEQAIJKOKKOS); 906db78de30SJunchao Zhang PetscFunctionReturn(0); 907db78de30SJunchao Zhang } 908db78de30SJunchao Zhang 90942550becSJunchao Zhang PetscErrorCode MatSeqAIJGetKokkosView(Mat A,MatScalarKokkosView* kv) 910db78de30SJunchao Zhang { 911db78de30SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 912db78de30SJunchao Zhang 913db78de30SJunchao Zhang PetscFunctionBegin; 914db78de30SJunchao Zhang PetscValidHeaderSpecific(A,MAT_CLASSID,1); 915db78de30SJunchao Zhang PetscValidPointer(kv,2); 916db78de30SJunchao Zhang PetscCheckTypeName(A,MATSEQAIJKOKKOS); 9179566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 918db78de30SJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 919076ba34aSJunchao Zhang *kv = aijkok->a_dual.view_device(); 920db78de30SJunchao Zhang PetscFunctionReturn(0); 921db78de30SJunchao Zhang } 922db78de30SJunchao Zhang 92342550becSJunchao Zhang PetscErrorCode MatSeqAIJRestoreKokkosView(Mat A,MatScalarKokkosView* kv) 924db78de30SJunchao Zhang { 925db78de30SJunchao Zhang PetscFunctionBegin; 926db78de30SJunchao Zhang PetscValidHeaderSpecific(A,MAT_CLASSID,1); 927db78de30SJunchao Zhang PetscValidPointer(kv,2); 928db78de30SJunchao Zhang PetscCheckTypeName(A,MATSEQAIJKOKKOS); 9299566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(A)); 930db78de30SJunchao Zhang PetscFunctionReturn(0); 931db78de30SJunchao Zhang } 932db78de30SJunchao Zhang 93342550becSJunchao Zhang PetscErrorCode MatSeqAIJGetKokkosViewWrite(Mat A,MatScalarKokkosView* kv) 934db78de30SJunchao Zhang { 935db78de30SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 936db78de30SJunchao Zhang 937db78de30SJunchao Zhang PetscFunctionBegin; 938db78de30SJunchao Zhang PetscValidHeaderSpecific(A,MAT_CLASSID,1); 939db78de30SJunchao Zhang PetscValidPointer(kv,2); 940db78de30SJunchao Zhang PetscCheckTypeName(A,MATSEQAIJKOKKOS); 941db78de30SJunchao Zhang aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 942076ba34aSJunchao Zhang *kv = aijkok->a_dual.view_device(); 943db78de30SJunchao Zhang PetscFunctionReturn(0); 944db78de30SJunchao Zhang } 945db78de30SJunchao Zhang 94642550becSJunchao Zhang PetscErrorCode MatSeqAIJRestoreKokkosViewWrite(Mat A,MatScalarKokkosView* kv) 947db78de30SJunchao Zhang { 948db78de30SJunchao Zhang PetscFunctionBegin; 949db78de30SJunchao Zhang PetscValidHeaderSpecific(A,MAT_CLASSID,1); 950db78de30SJunchao Zhang PetscValidPointer(kv,2); 951db78de30SJunchao Zhang PetscCheckTypeName(A,MATSEQAIJKOKKOS); 9529566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(A)); 953db78de30SJunchao Zhang PetscFunctionReturn(0); 954db78de30SJunchao Zhang } 955db78de30SJunchao Zhang 956c17cf699SJunchao Zhang /* Computes Y += alpha X */ 957c17cf699SJunchao Zhang static PetscErrorCode MatAXPY_SeqAIJKokkos(Mat Y,PetscScalar alpha,Mat X,MatStructure pattern) 958a587d139SMark { 959a587d139SMark Mat_SeqAIJ *x = (Mat_SeqAIJ*)X->data,*y = (Mat_SeqAIJ*)Y->data; 960c17cf699SJunchao Zhang Mat_SeqAIJKokkos *xkok,*ykok,*zkok; 961c17cf699SJunchao Zhang ConstMatScalarKokkosView Xa; 962c17cf699SJunchao Zhang MatScalarKokkosView Ya; 963a587d139SMark 964a587d139SMark PetscFunctionBegin; 965c17cf699SJunchao Zhang PetscCheckTypeName(Y,MATSEQAIJKOKKOS); 966c17cf699SJunchao Zhang PetscCheckTypeName(X,MATSEQAIJKOKKOS); 9679566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(Y)); 9689566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(X)); 9699566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 970db78de30SJunchao Zhang 971c17cf699SJunchao Zhang if (pattern != SAME_NONZERO_PATTERN && x->nz == y->nz) { 972c17cf699SJunchao Zhang /* We could compare on device, but have to get the comparison result on host. So compare on host instead. */ 973a587d139SMark PetscBool e; 9749566063dSJacob Faibussowitsch PetscCall(PetscArraycmp(x->i,y->i,Y->rmap->n+1,&e)); 975a587d139SMark if (e) { 9769566063dSJacob Faibussowitsch PetscCall(PetscArraycmp(x->j,y->j,y->nz,&e)); 977c17cf699SJunchao Zhang if (e) pattern = SAME_NONZERO_PATTERN; 978a587d139SMark } 979a587d139SMark } 980db78de30SJunchao Zhang 981c17cf699SJunchao Zhang /* cusparseDcsrgeam2() computes C = alpha A + beta B. If one knew sparsity pattern of C, one can skip 982c17cf699SJunchao Zhang cusparseScsrgeam2_bufferSizeExt() / cusparseXcsrgeam2Nnz(), and directly call cusparseScsrgeam2(). 983c17cf699SJunchao Zhang If X is SUBSET_NONZERO_PATTERN of Y, we could take advantage of this cusparse feature. However, 984c17cf699SJunchao Zhang KokkosSparse::spadd(alpha,A,beta,B,C) has symbolic and numeric phases, MatAXPY does not. 985c17cf699SJunchao Zhang */ 986c17cf699SJunchao Zhang ykok = static_cast<Mat_SeqAIJKokkos*>(Y->spptr); 987c17cf699SJunchao Zhang xkok = static_cast<Mat_SeqAIJKokkos*>(X->spptr); 988c17cf699SJunchao Zhang Xa = xkok->a_dual.view_device(); 989c17cf699SJunchao Zhang Ya = ykok->a_dual.view_device(); 990c17cf699SJunchao Zhang 991c17cf699SJunchao Zhang if (pattern == SAME_NONZERO_PATTERN) { 992c17cf699SJunchao Zhang KokkosBlas::axpy(alpha,Xa,Ya); 9939566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(Y)); 994c17cf699SJunchao Zhang } else if (pattern == SUBSET_NONZERO_PATTERN) { 995c17cf699SJunchao Zhang MatRowMapKokkosView Xi = xkok->i_dual.view_device(),Yi = ykok->i_dual.view_device(); 996c17cf699SJunchao Zhang MatColIdxKokkosView Xj = xkok->j_dual.view_device(),Yj = ykok->j_dual.view_device(); 997c17cf699SJunchao Zhang 998c17cf699SJunchao Zhang Kokkos::parallel_for(Kokkos::TeamPolicy<>(Y->rmap->n, 1),KOKKOS_LAMBDA(const KokkosTeamMemberType& t) { 999c17cf699SJunchao Zhang PetscInt i = t.league_rank(); /* row i */ 1000c17cf699SJunchao Zhang Kokkos::single(Kokkos::PerTeam(t), [=] () { /* Only one thread works in a team */ 1001c17cf699SJunchao Zhang PetscInt p,q = Yi(i); 1002c17cf699SJunchao Zhang for (p=Xi(i); p<Xi(i+1); p++) { /* For each nonzero on row i of X */ 1003c17cf699SJunchao Zhang while (Xj(p) != Yj(q) && q < Yi(i+1)) q++; /* find the matching nonzero on row i of Y */ 1004c17cf699SJunchao Zhang if (Xj(p) == Yj(q)) { /* Found it */ 1005c17cf699SJunchao Zhang Ya(q) += alpha * Xa(p); 1006c17cf699SJunchao Zhang q++; 1007a587d139SMark } else { 1008c17cf699SJunchao Zhang /* If not found, it indicates the input is wrong (X is not a SUBSET_NONZERO_PATTERN of Y). 1009c17cf699SJunchao Zhang Just insert a NaN at the beginning of row i if it is not empty, to make the result wrong. 1010c17cf699SJunchao Zhang */ 1011*8b8b16f9SJunchao Zhang if (Yi(i) != Yi(i+1)) Ya(Yi(i)) = 1012*8b8b16f9SJunchao Zhang #if PETSC_PKG_KOKKOS_VERSION_GE(3,6,99) 1013*8b8b16f9SJunchao Zhang Kokkos::nan("1"); /* auto promote the double NaN if needed */ 1014*8b8b16f9SJunchao Zhang #else 1015*8b8b16f9SJunchao Zhang Kokkos::Experimental::nan("1"); 1016*8b8b16f9SJunchao Zhang #endif 1017a587d139SMark } 1018c17cf699SJunchao Zhang } 1019c17cf699SJunchao Zhang }); 1020c17cf699SJunchao Zhang }); 10219566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosModifyDevice(Y)); 1022c17cf699SJunchao Zhang } else { /* different nonzero patterns */ 1023c17cf699SJunchao Zhang Mat Z; 1024c17cf699SJunchao Zhang KokkosCsrMatrix zcsr; 1025c17cf699SJunchao Zhang KernelHandle kh; 1026c17cf699SJunchao Zhang kh.create_spadd_handle(false); 1027c17cf699SJunchao Zhang KokkosSparse::spadd_symbolic(&kh,xkok->csrmat,ykok->csrmat,zcsr); 1028c17cf699SJunchao Zhang KokkosSparse::spadd_numeric(&kh,alpha,xkok->csrmat,(PetscScalar)1.0,ykok->csrmat,zcsr); 1029c17cf699SJunchao Zhang zkok = new Mat_SeqAIJKokkos(zcsr); 10309566063dSJacob Faibussowitsch PetscCall(MatCreateSeqAIJKokkosWithCSRMatrix(PETSC_COMM_SELF,zkok,&Z)); 10319566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(Y,&Z)); 1032c17cf699SJunchao Zhang kh.destroy_spadd_handle(); 1033c17cf699SJunchao Zhang } 10349566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 10359566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops(xkok->a_dual.extent(0)*2)); /* Because we scaled X and then added it to Y */ 1036a587d139SMark PetscFunctionReturn(0); 1037a587d139SMark } 1038a587d139SMark 1039394ed5ebSJunchao Zhang static PetscErrorCode MatSetPreallocationCOO_SeqAIJKokkos(Mat mat, PetscCount coo_n, const PetscInt coo_i[], const PetscInt coo_j[]) 104042550becSJunchao Zhang { 104142550becSJunchao Zhang Mat_SeqAIJKokkos *akok; 104242550becSJunchao Zhang Mat_SeqAIJ *aseq; 104342550becSJunchao Zhang 104442550becSJunchao Zhang PetscFunctionBegin; 10459566063dSJacob Faibussowitsch PetscCall(MatSetPreallocationCOO_SeqAIJ(mat,coo_n,coo_i,coo_j)); 1046394ed5ebSJunchao Zhang aseq = static_cast<Mat_SeqAIJ*>(mat->data); 104742550becSJunchao Zhang akok = static_cast<Mat_SeqAIJKokkos*>(mat->spptr); 1048cbc6b225SStefano Zampini delete akok; 1049cbc6b225SStefano Zampini mat->spptr = akok = new Mat_SeqAIJKokkos(mat->rmap->n,mat->cmap->n,aseq->nz,aseq->i,aseq->j,aseq->a,mat->nonzerostate+1,PETSC_FALSE); 10509566063dSJacob Faibussowitsch PetscCall(MatZeroEntries_SeqAIJKokkos(mat)); 1051394ed5ebSJunchao Zhang akok->SetUpCOO(aseq); 105242550becSJunchao Zhang PetscFunctionReturn(0); 105342550becSJunchao Zhang } 105442550becSJunchao Zhang 105542550becSJunchao Zhang static PetscErrorCode MatSetValuesCOO_SeqAIJKokkos(Mat A,const PetscScalar v[],InsertMode imode) 105642550becSJunchao Zhang { 105742550becSJunchao Zhang Mat_SeqAIJ *aseq = static_cast<Mat_SeqAIJ*>(A->data); 105842550becSJunchao Zhang Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 1059394ed5ebSJunchao Zhang PetscCount Annz = aseq->nz; 1060394ed5ebSJunchao Zhang const PetscCountKokkosView& jmap = akok->jmap_d; 1061394ed5ebSJunchao Zhang const PetscCountKokkosView& perm = akok->perm_d; 106242550becSJunchao Zhang MatScalarKokkosView Aa; 106342550becSJunchao Zhang ConstMatScalarKokkosView kv; 106442550becSJunchao Zhang PetscMemType memtype; 106542550becSJunchao Zhang 106642550becSJunchao Zhang PetscFunctionBegin; 10679566063dSJacob Faibussowitsch PetscCall(PetscGetMemType(v,&memtype)); 106842550becSJunchao Zhang if (PetscMemTypeHost(memtype)) { /* If user gave v[] in host, we might need to copy it to device if any */ 1069394ed5ebSJunchao Zhang kv = Kokkos::create_mirror_view_and_copy(DefaultMemorySpace(),ConstMatScalarKokkosViewHost(v,aseq->coo_n)); 107042550becSJunchao Zhang } else { 1071394ed5ebSJunchao Zhang kv = ConstMatScalarKokkosView(v,aseq->coo_n); /* Directly use v[]'s memory */ 107242550becSJunchao Zhang } 107342550becSJunchao Zhang 1074c7b718f4SJunchao Zhang if (imode == INSERT_VALUES) PetscCall(MatSeqAIJGetKokkosViewWrite(A,&Aa)); /* write matrix values */ 1075c7b718f4SJunchao Zhang else PetscCall(MatSeqAIJGetKokkosView(A,&Aa)); /* read & write matrix values */ 107642550becSJunchao Zhang 1077c7b718f4SJunchao Zhang Kokkos::parallel_for(Annz,KOKKOS_LAMBDA(const PetscCount i) { 1078c7b718f4SJunchao Zhang PetscScalar sum = 0.0; 1079c7b718f4SJunchao Zhang for (PetscCount k=jmap(i); k<jmap(i+1); k++) sum += kv(perm(k)); 1080c7b718f4SJunchao Zhang Aa(i) = (imode == INSERT_VALUES? 0.0 : Aa(i)) + sum; 1081c7b718f4SJunchao Zhang }); 1082394ed5ebSJunchao Zhang 10839566063dSJacob Faibussowitsch if (imode == INSERT_VALUES) PetscCall(MatSeqAIJRestoreKokkosViewWrite(A,&Aa)); 10849566063dSJacob Faibussowitsch else PetscCall(MatSeqAIJRestoreKokkosView(A,&Aa)); 108542550becSJunchao Zhang PetscFunctionReturn(0); 108642550becSJunchao Zhang } 108742550becSJunchao Zhang 10885fbaff96SJunchao Zhang PETSC_INTERN PetscErrorCode MatSeqAIJMoveDiagonalValuesFront_SeqAIJKokkos(Mat A,const PetscInt *diag) 10895fbaff96SJunchao Zhang { 10905fbaff96SJunchao Zhang Mat_SeqAIJKokkos *akok = static_cast<Mat_SeqAIJKokkos*>(A->spptr); 10915fbaff96SJunchao Zhang MatScalarKokkosView Aa; 10925fbaff96SJunchao Zhang const MatRowMapKokkosView& Ai = akok->i_dual.view_device(); 10935fbaff96SJunchao Zhang PetscInt m = A->rmap->n; 10945fbaff96SJunchao Zhang ConstMatRowMapKokkosView Adiag(diag,m); /* diag is a device pointer */ 10955fbaff96SJunchao Zhang 10965fbaff96SJunchao Zhang PetscFunctionBegin; 10975fbaff96SJunchao Zhang PetscCall(MatSeqAIJGetKokkosViewWrite(A,&Aa)); 10985fbaff96SJunchao Zhang Kokkos::parallel_for(m,KOKKOS_LAMBDA(const PetscInt i) { 10995fbaff96SJunchao Zhang PetscScalar tmp; 11005fbaff96SJunchao Zhang if (Adiag(i) >= Ai(i) && Adiag(i) < Ai(i+1)) { /* The diagonal element exists */ 11015fbaff96SJunchao Zhang tmp = Aa(Ai(i)); 11025fbaff96SJunchao Zhang Aa(Ai(i)) = Aa(Adiag(i)); 11035fbaff96SJunchao Zhang Aa(Adiag(i)) = tmp; 11045fbaff96SJunchao Zhang } 11055fbaff96SJunchao Zhang }); 11065fbaff96SJunchao Zhang PetscCall(MatSeqAIJRestoreKokkosViewWrite(A,&Aa)); 11075fbaff96SJunchao Zhang PetscFunctionReturn(0); 11085fbaff96SJunchao Zhang } 11095fbaff96SJunchao Zhang 111086a27549SJunchao Zhang static PetscErrorCode MatLUFactorNumeric_SeqAIJKokkos(Mat B,Mat A,const MatFactorInfo *info) 11118f7e8f9dSMark Adams { 11128f7e8f9dSMark Adams PetscFunctionBegin; 11139566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncHost(A)); 11149566063dSJacob Faibussowitsch PetscCall(MatLUFactorNumeric_SeqAIJ(B,A,info)); 11158f7e8f9dSMark Adams B->offloadmask = PETSC_OFFLOAD_CPU; 11168f7e8f9dSMark Adams PetscFunctionReturn(0); 11178f7e8f9dSMark Adams } 11188f7e8f9dSMark Adams 11198c3ff71bSJunchao Zhang static PetscErrorCode MatSetOps_SeqAIJKokkos(Mat A) 11208c3ff71bSJunchao Zhang { 1121076ba34aSJunchao Zhang Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 1122076ba34aSJunchao Zhang 11238c3ff71bSJunchao Zhang PetscFunctionBegin; 1124076ba34aSJunchao Zhang A->offloadmask = PETSC_OFFLOAD_KOKKOS; /* We do not really use this flag */ 11256f3d89d0SStefano Zampini A->boundtocpu = PETSC_FALSE; 11266f3d89d0SStefano Zampini 11278c3ff71bSJunchao Zhang A->ops->assemblyend = MatAssemblyEnd_SeqAIJKokkos; 11288c3ff71bSJunchao Zhang A->ops->destroy = MatDestroy_SeqAIJKokkos; 11298c3ff71bSJunchao Zhang A->ops->duplicate = MatDuplicate_SeqAIJKokkos; 1130a587d139SMark A->ops->axpy = MatAXPY_SeqAIJKokkos; 1131f0cf5187SStefano Zampini A->ops->scale = MatScale_SeqAIJKokkos; 1132a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJKokkos; 1133076ba34aSJunchao Zhang A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJKokkos; 11348c3ff71bSJunchao Zhang A->ops->mult = MatMult_SeqAIJKokkos; 11358c3ff71bSJunchao Zhang A->ops->multadd = MatMultAdd_SeqAIJKokkos; 11368c3ff71bSJunchao Zhang A->ops->multtranspose = MatMultTranspose_SeqAIJKokkos; 11378c3ff71bSJunchao Zhang A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJKokkos; 11388c3ff71bSJunchao Zhang A->ops->multhermitiantranspose = MatMultHermitianTranspose_SeqAIJKokkos; 11398c3ff71bSJunchao Zhang A->ops->multhermitiantransposeadd = MatMultHermitianTransposeAdd_SeqAIJKokkos; 1140076ba34aSJunchao Zhang A->ops->productnumeric = MatProductNumeric_SeqAIJKokkos_SeqAIJKokkos; 11410ecb592aSJunchao Zhang A->ops->transpose = MatTranspose_SeqAIJKokkos; 1142152b3e56SJunchao Zhang A->ops->setoption = MatSetOption_SeqAIJKokkos; 1143076ba34aSJunchao Zhang a->ops->getarray = MatSeqAIJGetArray_SeqAIJKokkos; 1144076ba34aSJunchao Zhang a->ops->restorearray = MatSeqAIJRestoreArray_SeqAIJKokkos; 1145076ba34aSJunchao Zhang a->ops->getarrayread = MatSeqAIJGetArrayRead_SeqAIJKokkos; 1146076ba34aSJunchao Zhang a->ops->restorearrayread = MatSeqAIJRestoreArrayRead_SeqAIJKokkos; 1147076ba34aSJunchao Zhang a->ops->getarraywrite = MatSeqAIJGetArrayWrite_SeqAIJKokkos; 1148076ba34aSJunchao Zhang a->ops->restorearraywrite = MatSeqAIJRestoreArrayWrite_SeqAIJKokkos; 11497ee59b9bSJunchao Zhang a->ops->getcsrandmemtype = MatSeqAIJGetCSRAndMemType_SeqAIJKokkos; 115042550becSJunchao Zhang 11519566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",MatSetPreallocationCOO_SeqAIJKokkos)); 11529566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",MatSetValuesCOO_SeqAIJKokkos)); 1153076ba34aSJunchao Zhang PetscFunctionReturn(0); 1154076ba34aSJunchao Zhang } 1155076ba34aSJunchao Zhang 1156076ba34aSJunchao Zhang PETSC_INTERN PetscErrorCode MatSetSeqAIJKokkosWithCSRMatrix(Mat A,Mat_SeqAIJKokkos *akok) 1157076ba34aSJunchao Zhang { 1158076ba34aSJunchao Zhang Mat_SeqAIJ *aseq; 1159076ba34aSJunchao Zhang PetscInt i,m,n; 1160076ba34aSJunchao Zhang 1161076ba34aSJunchao Zhang PetscFunctionBegin; 11625f80ce2aSJacob Faibussowitsch PetscCheck(!A->spptr,PETSC_COMM_SELF,PETSC_ERR_PLIB,"A->spptr is supposed to be empty"); 1163076ba34aSJunchao Zhang 1164076ba34aSJunchao Zhang m = akok->nrows(); 1165076ba34aSJunchao Zhang n = akok->ncols(); 11669566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A,m,n,m,n)); 11679566063dSJacob Faibussowitsch PetscCall(MatSetType(A,MATSEQAIJKOKKOS)); 1168076ba34aSJunchao Zhang 1169076ba34aSJunchao Zhang /* Set up data structures of A as a MATSEQAIJ */ 11709566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(A,MAT_SKIP_ALLOCATION,NULL)); 1171076ba34aSJunchao Zhang aseq = (Mat_SeqAIJ*)(A)->data; 1172076ba34aSJunchao Zhang 1173076ba34aSJunchao Zhang akok->i_dual.sync_host(); /* We always need sync'ed i, j on host */ 1174076ba34aSJunchao Zhang akok->j_dual.sync_host(); 1175076ba34aSJunchao Zhang 1176076ba34aSJunchao Zhang aseq->i = akok->i_host_data(); 1177076ba34aSJunchao Zhang aseq->j = akok->j_host_data(); 1178076ba34aSJunchao Zhang aseq->a = akok->a_host_data(); 1179076ba34aSJunchao Zhang aseq->nonew = -1; /*this indicates that inserting a new value in the matrix that generates a new nonzero is an error*/ 1180076ba34aSJunchao Zhang aseq->singlemalloc = PETSC_FALSE; 1181076ba34aSJunchao Zhang aseq->free_a = PETSC_FALSE; 1182076ba34aSJunchao Zhang aseq->free_ij = PETSC_FALSE; 1183076ba34aSJunchao Zhang aseq->nz = akok->nnz(); 1184076ba34aSJunchao Zhang aseq->maxnz = aseq->nz; 1185076ba34aSJunchao Zhang 11869566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m,&aseq->imax)); 11879566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m,&aseq->ilen)); 1188076ba34aSJunchao Zhang for (i=0; i<m; i++) { 1189076ba34aSJunchao Zhang aseq->ilen[i] = aseq->imax[i] = aseq->i[i+1] - aseq->i[i]; 1190076ba34aSJunchao Zhang } 1191076ba34aSJunchao Zhang 1192076ba34aSJunchao Zhang /* It is critical to set the nonzerostate, as we use it to check if sparsity pattern (hence data) has changed on host in MatAssemblyEnd */ 1193076ba34aSJunchao Zhang akok->nonzerostate = A->nonzerostate; 1194ff751488SJunchao Zhang A->spptr = akok; /* Set A->spptr before MatAssembly so that A->spptr won't be allocated again there */ 11959566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY)); 11969566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY)); 1197076ba34aSJunchao Zhang PetscFunctionReturn(0); 1198076ba34aSJunchao Zhang } 1199076ba34aSJunchao Zhang 1200076ba34aSJunchao Zhang /* Crete a SEQAIJKOKKOS matrix with a Mat_SeqAIJKokkos data structure 1201076ba34aSJunchao Zhang 1202076ba34aSJunchao Zhang Note we have names like MatSeqAIJSetPreallocationCSR, so I use capitalized CSR 1203076ba34aSJunchao Zhang */ 1204076ba34aSJunchao Zhang PETSC_INTERN PetscErrorCode MatCreateSeqAIJKokkosWithCSRMatrix(MPI_Comm comm,Mat_SeqAIJKokkos *akok,Mat *A) 1205076ba34aSJunchao Zhang { 1206076ba34aSJunchao Zhang PetscFunctionBegin; 12079566063dSJacob Faibussowitsch PetscCall(MatCreate(comm,A)); 12089566063dSJacob Faibussowitsch PetscCall(MatSetSeqAIJKokkosWithCSRMatrix(*A,akok)); 12098c3ff71bSJunchao Zhang PetscFunctionReturn(0); 12108c3ff71bSJunchao Zhang } 12118c3ff71bSJunchao Zhang 12128c3ff71bSJunchao Zhang /* --------------------------------------------------------------------------------*/ 1213152b3e56SJunchao Zhang /*@C 12148c3ff71bSJunchao Zhang MatCreateSeqAIJKokkos - Creates a sparse matrix in AIJ (compressed row) format 12158c3ff71bSJunchao Zhang (the default parallel PETSc format). This matrix will ultimately be handled by 12168c3ff71bSJunchao Zhang Kokkos for calculations. For good matrix 12178c3ff71bSJunchao Zhang assembly performance the user should preallocate the matrix storage by setting 12188c3ff71bSJunchao Zhang the parameter nz (or the array nnz). By setting these parameters accurately, 12198c3ff71bSJunchao Zhang performance during matrix assembly can be increased by more than a factor of 50. 12208c3ff71bSJunchao Zhang 12218c3ff71bSJunchao Zhang Collective 12228c3ff71bSJunchao Zhang 12238c3ff71bSJunchao Zhang Input Parameters: 12248c3ff71bSJunchao Zhang + comm - MPI communicator, set to PETSC_COMM_SELF 12258c3ff71bSJunchao Zhang . m - number of rows 12268c3ff71bSJunchao Zhang . n - number of columns 12278c3ff71bSJunchao Zhang . nz - number of nonzeros per row (same for all rows) 12288c3ff71bSJunchao Zhang - nnz - array containing the number of nonzeros in the various rows 12298c3ff71bSJunchao Zhang (possibly different for each row) or NULL 12308c3ff71bSJunchao Zhang 12318c3ff71bSJunchao Zhang Output Parameter: 12328c3ff71bSJunchao Zhang . A - the matrix 12338c3ff71bSJunchao Zhang 12348c3ff71bSJunchao Zhang It is recommended that one use the MatCreate(), MatSetType() and/or MatSetFromOptions(), 12358c3ff71bSJunchao Zhang MatXXXXSetPreallocation() paradgm instead of this routine directly. 12368c3ff71bSJunchao Zhang [MatXXXXSetPreallocation() is, for example, MatSeqAIJSetPreallocation] 12378c3ff71bSJunchao Zhang 12388c3ff71bSJunchao Zhang Notes: 12398c3ff71bSJunchao Zhang If nnz is given then nz is ignored 12408c3ff71bSJunchao Zhang 12418c3ff71bSJunchao Zhang The AIJ format (also called the Yale sparse matrix format or 12428c3ff71bSJunchao Zhang compressed row storage), is fully compatible with standard Fortran 77 12438c3ff71bSJunchao Zhang storage. That is, the stored row and column indices can begin at 12448c3ff71bSJunchao Zhang either one (as in Fortran) or zero. See the users' manual for details. 12458c3ff71bSJunchao Zhang 12468c3ff71bSJunchao Zhang Specify the preallocated storage with either nz or nnz (not both). 12478c3ff71bSJunchao Zhang Set nz=PETSC_DEFAULT and nnz=NULL for PETSc to control dynamic memory 12488c3ff71bSJunchao Zhang allocation. For large problems you MUST preallocate memory or you 12498c3ff71bSJunchao Zhang will get TERRIBLE performance, see the users' manual chapter on matrices. 12508c3ff71bSJunchao Zhang 12518c3ff71bSJunchao Zhang By default, this format uses inodes (identical nodes) when possible, to 12528c3ff71bSJunchao Zhang improve numerical efficiency of matrix-vector products and solves. We 12538c3ff71bSJunchao Zhang search for consecutive rows with the same nonzero structure, thereby 12548c3ff71bSJunchao Zhang reusing matrix information to achieve increased efficiency. 12558c3ff71bSJunchao Zhang 12568c3ff71bSJunchao Zhang Level: intermediate 12578c3ff71bSJunchao Zhang 1258db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateAIJ()`, `MatSetValues()`, `MatSeqAIJSetColumnIndices()`, `MatCreateSeqAIJWithArrays()`, `MatCreateAIJ()` 12598c3ff71bSJunchao Zhang @*/ 12608c3ff71bSJunchao Zhang PetscErrorCode MatCreateSeqAIJKokkos(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt nz,const PetscInt nnz[],Mat *A) 12618c3ff71bSJunchao Zhang { 12628c3ff71bSJunchao Zhang PetscFunctionBegin; 12639566063dSJacob Faibussowitsch PetscCall(PetscKokkosInitializeCheck()); 12649566063dSJacob Faibussowitsch PetscCall(MatCreate(comm,A)); 12659566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A,m,n,m,n)); 12669566063dSJacob Faibussowitsch PetscCall(MatSetType(*A,MATSEQAIJKOKKOS)); 12679566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(*A,nz,(PetscInt*)nnz)); 12688c3ff71bSJunchao Zhang PetscFunctionReturn(0); 12698c3ff71bSJunchao Zhang } 1270930e68a5SMark Adams 12718f7e8f9dSMark Adams typedef Kokkos::TeamPolicy<>::member_type team_member; 12728f7e8f9dSMark Adams // 127346804e07SMark Adams // This factorization exploits block diagonal matrices with "Nf" (not used). 12748f7e8f9dSMark Adams // Use -pc_factor_mat_ordering_type rcm to order decouple blocks of size N/Nf for this optimization 12758f7e8f9dSMark Adams // 12768f7e8f9dSMark Adams static PetscErrorCode MatLUFactorNumeric_SeqAIJKOKKOSDEVICE(Mat B,Mat A,const MatFactorInfo *info) 1277930e68a5SMark Adams { 12788f7e8f9dSMark Adams Mat_SeqAIJ *b=(Mat_SeqAIJ*)B->data; 12798f7e8f9dSMark Adams Mat_SeqAIJKokkos *aijkok = static_cast<Mat_SeqAIJKokkos*>(A->spptr), *baijkok = static_cast<Mat_SeqAIJKokkos*>(B->spptr); 12808f7e8f9dSMark Adams IS isrow = b->row,isicol = b->icol; 12818f7e8f9dSMark Adams const PetscInt *r_h,*ic_h; 1282300d22a6SJunchao Zhang const PetscInt n=A->rmap->n, *ai_d=aijkok->i_dual.view_device().data(), *aj_d=aijkok->j_dual.view_device().data(), *bi_d=baijkok->i_dual.view_device().data(), *bj_d=baijkok->j_dual.view_device().data(), *bdiag_d = baijkok->diag_d.data(); 1283076ba34aSJunchao Zhang const PetscScalar *aa_d = aijkok->a_dual.view_device().data(); 1284076ba34aSJunchao Zhang PetscScalar *ba_d = baijkok->a_dual.view_device().data(); 12858f7e8f9dSMark Adams PetscBool row_identity,col_identity; 128646804e07SMark Adams PetscInt nc, Nf=1, nVec=32; // should be a parameter, Nf is batch size - not used 1287930e68a5SMark Adams 1288930e68a5SMark Adams PetscFunctionBegin; 12892c71b3e2SJacob Faibussowitsch PetscCheck(A->rmap->n == n,PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"square matrices only supported %" PetscInt_FMT " %" PetscInt_FMT,A->rmap->n,n); 12909566063dSJacob Faibussowitsch PetscCall(MatGetOption(A,MAT_STRUCTURALLY_SYMMETRIC,&row_identity)); 12912c71b3e2SJacob Faibussowitsch PetscCheck(row_identity,PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"structurally symmetric matrices only supported"); 12929566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow,&r_h)); 12939566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isicol,&ic_h)); 12949566063dSJacob Faibussowitsch PetscCall(ISGetSize(isicol,&nc)); 12959566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 12969566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 12978f7e8f9dSMark Adams { 12988f7e8f9dSMark Adams #define KOKKOS_SHARED_LEVEL 1 12998f7e8f9dSMark Adams using scr_mem_t = Kokkos::DefaultExecutionSpace::scratch_memory_space; 13008f7e8f9dSMark Adams using sizet_scr_t = Kokkos::View<size_t, scr_mem_t>; 13018f7e8f9dSMark Adams using scalar_scr_t = Kokkos::View<PetscScalar, scr_mem_t>; 13028f7e8f9dSMark Adams const Kokkos::View<const PetscInt*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_r_k (r_h, n); 13038f7e8f9dSMark Adams Kokkos::View<PetscInt*, Kokkos::LayoutLeft> d_r_k ("r", n); 13048f7e8f9dSMark Adams const Kokkos::View<const PetscInt*, Kokkos::LayoutLeft, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_ic_k (ic_h, nc); 13058f7e8f9dSMark Adams Kokkos::View<PetscInt*, Kokkos::LayoutLeft> d_ic_k ("ic", nc); 13068f7e8f9dSMark Adams size_t flops_h = 0.0; 13078f7e8f9dSMark Adams Kokkos::View<size_t, Kokkos::HostSpace> h_flops_k (&flops_h); 13088f7e8f9dSMark Adams Kokkos::View<size_t> d_flops_k ("flops"); 13098f7e8f9dSMark Adams const int conc = Kokkos::DefaultExecutionSpace().concurrency(), team_size = conc > 1 ? 16 : 1; // 8*32 = 256 13108f7e8f9dSMark Adams const int nloc = n/Nf, Ni = (conc > 8) ? 1 /* some intelegent number of SMs -- but need league_barrier */ : 1; 13118f7e8f9dSMark Adams Kokkos::deep_copy (d_flops_k, h_flops_k); 13128f7e8f9dSMark Adams Kokkos::deep_copy (d_r_k, h_r_k); 13138f7e8f9dSMark Adams Kokkos::deep_copy (d_ic_k, h_ic_k); 13148f7e8f9dSMark Adams // Fill A --> fact 13158f7e8f9dSMark Adams Kokkos::parallel_for(Kokkos::TeamPolicy<>(Nf*Ni, team_size, nVec), KOKKOS_LAMBDA (const team_member team) { 1316042217e8SBarry Smith const PetscInt field = team.league_rank()/Ni, field_block = team.league_rank()%Ni; // use grid.x/y in CUDA 13178f7e8f9dSMark Adams const PetscInt nloc_i = (nloc/Ni + !!(nloc%Ni)), start_i = field*nloc + field_block*nloc_i, end_i = (start_i + nloc_i) > (field+1)*nloc ? (field+1)*nloc : (start_i + nloc_i); 13188f7e8f9dSMark Adams const PetscInt *ic = d_ic_k.data(), *r = d_r_k.data(); 13198f7e8f9dSMark Adams // zero rows of B 13208f7e8f9dSMark Adams Kokkos::parallel_for(Kokkos::TeamVectorRange(team, start_i, end_i), [=] (const int &rowb) { 13218f7e8f9dSMark Adams PetscInt nzbL = bi_d[rowb+1] - bi_d[rowb], nzbU = bdiag_d[rowb] - bdiag_d[rowb+1]; // with diag 13228f7e8f9dSMark Adams PetscScalar *baL = ba_d + bi_d[rowb]; 13238f7e8f9dSMark Adams PetscScalar *baU = ba_d + bdiag_d[rowb+1]+1; 13248f7e8f9dSMark Adams /* zero (unfactored row) */ 13258f7e8f9dSMark Adams for (int j=0;j<nzbL;j++) baL[j] = 0; 13268f7e8f9dSMark Adams for (int j=0;j<nzbU;j++) baU[j] = 0; 13278f7e8f9dSMark Adams }); 13288f7e8f9dSMark Adams // copy A into B 13298f7e8f9dSMark Adams Kokkos::parallel_for(Kokkos::TeamVectorRange(team, start_i, end_i), [=] (const int &rowb) { 13308f7e8f9dSMark Adams PetscInt rowa = r[rowb], nza = ai_d[rowa+1] - ai_d[rowa]; 13318f7e8f9dSMark Adams const PetscScalar *av = aa_d + ai_d[rowa]; 13328f7e8f9dSMark Adams const PetscInt *ajtmp = aj_d + ai_d[rowa]; 13338f7e8f9dSMark Adams /* load in initial (unfactored row) */ 13348f7e8f9dSMark Adams for (int j=0;j<nza;j++) { 13358f7e8f9dSMark Adams PetscInt colb = ic[ajtmp[j]]; 13368f7e8f9dSMark Adams PetscScalar vala = av[j]; 13378f7e8f9dSMark Adams if (colb == rowb) { 13388f7e8f9dSMark Adams *(ba_d + bdiag_d[rowb]) = vala; 13398f7e8f9dSMark Adams } else { 13408f7e8f9dSMark Adams const PetscInt *pbj = bj_d + ((colb > rowb) ? bdiag_d[rowb+1]+1 : bi_d[rowb]); 13418f7e8f9dSMark Adams PetscScalar *pba = ba_d + ((colb > rowb) ? bdiag_d[rowb+1]+1 : bi_d[rowb]); 13428f7e8f9dSMark Adams PetscInt nz = (colb > rowb) ? bdiag_d[rowb] - (bdiag_d[rowb+1]+1) : bi_d[rowb+1] - bi_d[rowb], set=0; 13438f7e8f9dSMark Adams for (int j=0; j<nz ; j++) { 13448f7e8f9dSMark Adams if (pbj[j] == colb) { 13458f7e8f9dSMark Adams pba[j] = vala; 13468f7e8f9dSMark Adams set++; 13478f7e8f9dSMark Adams break; 13488f7e8f9dSMark Adams } 13498f7e8f9dSMark Adams } 13508f1da0b2SJunchao Zhang #if !defined(PETSC_HAVE_SYCL) 13518f7e8f9dSMark Adams if (set!=1) printf("\t\t\t ERROR DID NOT SET ?????\n"); 13528f1da0b2SJunchao Zhang #endif 13538f7e8f9dSMark Adams } 13548f7e8f9dSMark Adams } 13558f7e8f9dSMark Adams }); 13568f7e8f9dSMark Adams }); 13578f7e8f9dSMark Adams Kokkos::fence(); 1358930e68a5SMark Adams 13598f7e8f9dSMark Adams Kokkos::parallel_for(Kokkos::TeamPolicy<>(Nf*Ni, team_size, nVec).set_scratch_size(KOKKOS_SHARED_LEVEL, Kokkos::PerThread(sizet_scr_t::shmem_size()+scalar_scr_t::shmem_size()), Kokkos::PerTeam(sizet_scr_t::shmem_size())), KOKKOS_LAMBDA (const team_member team) { 13608f7e8f9dSMark Adams sizet_scr_t colkIdx(team.thread_scratch(KOKKOS_SHARED_LEVEL)); 13618f7e8f9dSMark Adams scalar_scr_t L_ki(team.thread_scratch(KOKKOS_SHARED_LEVEL)); 13628f7e8f9dSMark Adams sizet_scr_t flops(team.team_scratch(KOKKOS_SHARED_LEVEL)); 1363042217e8SBarry Smith const PetscInt field = team.league_rank()/Ni, field_block_idx = team.league_rank()%Ni; // use grid.x/y in CUDA 13648f7e8f9dSMark Adams const PetscInt start = field*nloc, end = start + nloc; 13658f7e8f9dSMark Adams Kokkos::single(Kokkos::PerTeam(team), [=]() { flops() = 0; }); 13668f7e8f9dSMark Adams // A22 panel update for each row A(1,:) and col A(:,1) 13678f7e8f9dSMark Adams for (int ii=start; ii<end-1; ii++) { 13688f7e8f9dSMark Adams const PetscInt *bjUi = bj_d + bdiag_d[ii+1]+1, nzUi = bdiag_d[ii] - (bdiag_d[ii+1]+1); // vector, and vector size, of column indices of U(i,(i+1):end) 13698f7e8f9dSMark Adams const PetscScalar *baUi = ba_d + bdiag_d[ii+1]+1; // vector of data U(i,i+1:end) 13708f7e8f9dSMark Adams const PetscInt nUi_its = nzUi/Ni + !!(nzUi%Ni); 13718f7e8f9dSMark Adams const PetscScalar Bii = *(ba_d + bdiag_d[ii]); // diagonal in its special place 13728f7e8f9dSMark Adams Kokkos::parallel_for(Kokkos::TeamThreadRange(team, nUi_its), [=] (const int j) { 13738f7e8f9dSMark Adams PetscInt kIdx = j*Ni + field_block_idx; 13748f7e8f9dSMark Adams if (kIdx >= nzUi) /* void */ ; 13758f7e8f9dSMark Adams else { 13768f7e8f9dSMark Adams const PetscInt myk = bjUi[kIdx]; // assume symmetric structure, need a transposed meta-data here in general 13778f7e8f9dSMark Adams const PetscInt *pjL = bj_d + bi_d[myk]; // look for L(myk,ii) in start of row 13788f7e8f9dSMark Adams const PetscInt nzL = bi_d[myk+1] - bi_d[myk]; // size of L_k(:) 13798f7e8f9dSMark Adams size_t st_idx; 13808f7e8f9dSMark Adams // find and do L(k,i) = A(:k,i) / A(i,i) 13818f7e8f9dSMark Adams Kokkos::single(Kokkos::PerThread(team), [&]() { colkIdx() = PETSC_MAX_INT; }); 13828f7e8f9dSMark Adams // get column, there has got to be a better way 13838f7e8f9dSMark Adams Kokkos::parallel_reduce(Kokkos::ThreadVectorRange(team,nzL), [&] (const int &j, size_t &idx) { 13848f7e8f9dSMark Adams if (pjL[j] == ii) { 13858f7e8f9dSMark Adams PetscScalar *pLki = ba_d + bi_d[myk] + j; 13868f7e8f9dSMark Adams idx = j; // output 13878f7e8f9dSMark Adams *pLki = *pLki/Bii; // column scaling: L(k,i) = A(:k,i) / A(i,i) 13888f7e8f9dSMark Adams } 13898f7e8f9dSMark Adams }, st_idx); 13908f7e8f9dSMark Adams Kokkos::single(Kokkos::PerThread(team), [=]() { colkIdx() = st_idx; L_ki() = *(ba_d + bi_d[myk] + st_idx); }); 13918f1da0b2SJunchao Zhang #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL) 139299551766SMark Adams if (colkIdx() == PETSC_MAX_INT) printf("\t\t\t\t\t\t\tERROR: failed to find L_ki(%d,%d)\n",(int)myk,ii); // uses a register 139399551766SMark Adams #endif 139499551766SMark Adams // active row k, do A_kj -= Lki * U_ij; j \in U(i,:) j != i 13958f7e8f9dSMark Adams // U(i+1,:end) 13968f7e8f9dSMark Adams Kokkos::parallel_for(Kokkos::ThreadVectorRange(team,nzUi), [=] (const int &uiIdx) { // index into i (U) 13978f7e8f9dSMark Adams PetscScalar Uij = baUi[uiIdx]; 13988f7e8f9dSMark Adams PetscInt col = bjUi[uiIdx]; 13998f7e8f9dSMark Adams if (col==myk) { 14008f7e8f9dSMark Adams // A_kk = A_kk - L_ki * U_ij(k) 14018f7e8f9dSMark Adams PetscScalar *Akkv = (ba_d + bdiag_d[myk]); // diagonal in its special place 14028f7e8f9dSMark Adams *Akkv = *Akkv - L_ki() * Uij; // UiK 14038f7e8f9dSMark Adams } else { 14048f7e8f9dSMark Adams PetscScalar *start, *end, *pAkjv=NULL; 14058f7e8f9dSMark Adams PetscInt high, low; 14068f7e8f9dSMark Adams const PetscInt *startj; 14078f7e8f9dSMark Adams if (col<myk) { // L 14088f7e8f9dSMark Adams PetscScalar *pLki = ba_d + bi_d[myk] + colkIdx(); 14098f7e8f9dSMark Adams PetscInt idx = (pLki+1) - (ba_d + bi_d[myk]); // index into row 14108f7e8f9dSMark Adams start = pLki+1; // start at pLki+1, A22(myk,1) 14118f7e8f9dSMark Adams startj= bj_d + bi_d[myk] + idx; 14128f7e8f9dSMark Adams end = ba_d + bi_d[myk+1]; 14138f7e8f9dSMark Adams } else { 14148f7e8f9dSMark Adams PetscInt idx = bdiag_d[myk+1]+1; 14158f7e8f9dSMark Adams start = ba_d + idx; 14168f7e8f9dSMark Adams startj= bj_d + idx; 14178f7e8f9dSMark Adams end = ba_d + bdiag_d[myk]; 14188f7e8f9dSMark Adams } 14198f7e8f9dSMark Adams // search for 'col', use bisection search - TODO 14208f7e8f9dSMark Adams low = 0; 14218f7e8f9dSMark Adams high = (PetscInt)(end-start); 14228f7e8f9dSMark Adams while (high-low > 5) { 14238f7e8f9dSMark Adams int t = (low+high)/2; 14248f7e8f9dSMark Adams if (startj[t] > col) high = t; 14258f7e8f9dSMark Adams else low = t; 14268f7e8f9dSMark Adams } 14278f7e8f9dSMark Adams for (pAkjv=start+low; pAkjv<start+high; pAkjv++) { 14288f7e8f9dSMark Adams if (startj[pAkjv-start] == col) break; 14298f7e8f9dSMark Adams } 14308f1da0b2SJunchao Zhang #if defined(PETSC_USE_DEBUG) && !defined(PETSC_HAVE_SYCL) 143199551766SMark Adams if (pAkjv==start+high) printf("\t\t\t\t\t\t\t\t\t\t\tERROR: *** failed to find Akj(%d,%d)\n",(int)myk,(int)col); // uses a register 143299551766SMark Adams #endif 14338f7e8f9dSMark Adams *pAkjv = *pAkjv - L_ki() * Uij; // A_kj = A_kj - L_ki * U_ij 14348f7e8f9dSMark Adams } 14358f7e8f9dSMark Adams }); 14368f7e8f9dSMark Adams } 14378f7e8f9dSMark Adams }); 14388f7e8f9dSMark Adams team.team_barrier(); // this needs to be a league barrier to use more that one SM per block 14398f7e8f9dSMark Adams if (field_block_idx==0) Kokkos::single(Kokkos::PerTeam(team), [&]() { Kokkos::atomic_add( flops.data(), (size_t)(2*(nzUi*nzUi)+2)); }); 14408f7e8f9dSMark Adams } /* endof for (i=0; i<n; i++) { */ 14418f7e8f9dSMark Adams Kokkos::single(Kokkos::PerTeam(team), [=]() { Kokkos::atomic_add( &d_flops_k(), flops()); flops() = 0; }); 14428f7e8f9dSMark Adams }); 14438f7e8f9dSMark Adams Kokkos::fence(); 14448f7e8f9dSMark Adams Kokkos::deep_copy (h_flops_k, d_flops_k); 14459566063dSJacob Faibussowitsch PetscCall(PetscLogGpuFlops((PetscLogDouble)h_flops_k())); 14468f7e8f9dSMark Adams Kokkos::parallel_for(Kokkos::TeamPolicy<>(Nf*Ni, 1, 256), KOKKOS_LAMBDA (const team_member team) { 14478f7e8f9dSMark Adams const PetscInt lg_rank = team.league_rank(), field = lg_rank/Ni; //, field_offset = lg_rank%Ni; 14488f7e8f9dSMark Adams const PetscInt start = field*nloc, end = start + nloc, n_its = (nloc/Ni + !!(nloc%Ni)); // 1/Ni iters 14498f7e8f9dSMark Adams /* Invert diagonal for simpler triangular solves */ 14508f7e8f9dSMark Adams Kokkos::parallel_for(Kokkos::TeamVectorRange(team, n_its), [=] (int outer_index) { 14518f7e8f9dSMark Adams int i = start + outer_index*Ni + lg_rank%Ni; 14528f7e8f9dSMark Adams if (i < end) { 14538f7e8f9dSMark Adams PetscScalar *pv = ba_d + bdiag_d[i]; 14548f7e8f9dSMark Adams *pv = 1.0/(*pv); 14558f7e8f9dSMark Adams } 14568f7e8f9dSMark Adams }); 14578f7e8f9dSMark Adams }); 14588f7e8f9dSMark Adams } 14599566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 14609566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isicol,&ic_h)); 14619566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow,&r_h)); 14628f7e8f9dSMark Adams 14639566063dSJacob Faibussowitsch PetscCall(ISIdentity(isrow,&row_identity)); 14649566063dSJacob Faibussowitsch PetscCall(ISIdentity(isicol,&col_identity)); 14658f7e8f9dSMark Adams if (b->inode.size) { 14668f7e8f9dSMark Adams B->ops->solve = MatSolve_SeqAIJ_Inode; 14678f7e8f9dSMark Adams } else if (row_identity && col_identity) { 14688f7e8f9dSMark Adams B->ops->solve = MatSolve_SeqAIJ_NaturalOrdering; 14698f7e8f9dSMark Adams } else { 14708f7e8f9dSMark Adams B->ops->solve = MatSolve_SeqAIJ; // at least this needs to be in Kokkos 14718f7e8f9dSMark Adams } 14728f7e8f9dSMark Adams B->offloadmask = PETSC_OFFLOAD_GPU; 14739566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncHost(B)); // solve on CPU 14748f7e8f9dSMark Adams B->ops->solveadd = MatSolveAdd_SeqAIJ; // and this 14758f7e8f9dSMark Adams B->ops->solvetranspose = MatSolveTranspose_SeqAIJ; 14768f7e8f9dSMark Adams B->ops->solvetransposeadd = MatSolveTransposeAdd_SeqAIJ; 14778f7e8f9dSMark Adams B->ops->matsolve = MatMatSolve_SeqAIJ; 14788f7e8f9dSMark Adams B->assembled = PETSC_TRUE; 14798f7e8f9dSMark Adams B->preallocated = PETSC_TRUE; 14808f7e8f9dSMark Adams 1481930e68a5SMark Adams PetscFunctionReturn(0); 1482930e68a5SMark Adams } 1483930e68a5SMark Adams 148486a27549SJunchao Zhang static PetscErrorCode MatLUFactorSymbolic_SeqAIJKokkos(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 1485930e68a5SMark Adams { 1486930e68a5SMark Adams PetscFunctionBegin; 14879566063dSJacob Faibussowitsch PetscCall(MatLUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info)); 148886a27549SJunchao Zhang B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJKokkos; 148986a27549SJunchao Zhang PetscFunctionReturn(0); 149086a27549SJunchao Zhang } 149186a27549SJunchao Zhang 149286a27549SJunchao Zhang static PetscErrorCode MatSeqAIJKokkosSymbolicSolveCheck(Mat A) 149386a27549SJunchao Zhang { 149486a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors*)A->spptr; 149586a27549SJunchao Zhang 149686a27549SJunchao Zhang PetscFunctionBegin; 149786a27549SJunchao Zhang if (!factors->sptrsv_symbolic_completed) { 149886a27549SJunchao Zhang KokkosSparse::Experimental::sptrsv_symbolic(&factors->khU,factors->iU_d,factors->jU_d,factors->aU_d); 149986a27549SJunchao Zhang KokkosSparse::Experimental::sptrsv_symbolic(&factors->khL,factors->iL_d,factors->jL_d,factors->aL_d); 150086a27549SJunchao Zhang factors->sptrsv_symbolic_completed = PETSC_TRUE; 150186a27549SJunchao Zhang } 150286a27549SJunchao Zhang PetscFunctionReturn(0); 150386a27549SJunchao Zhang } 150486a27549SJunchao Zhang 150586a27549SJunchao Zhang /* Check if we need to update factors etc for transpose solve */ 150686a27549SJunchao Zhang static PetscErrorCode MatSeqAIJKokkosTransposeSolveCheck(Mat A) 150786a27549SJunchao Zhang { 150886a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors*)A->spptr; 1509076ba34aSJunchao Zhang MatColIdxType n = A->rmap->n; 151086a27549SJunchao Zhang 151186a27549SJunchao Zhang PetscFunctionBegin; 151286a27549SJunchao Zhang if (!factors->transpose_updated) { /* TODO: KK needs to provide functions to do numeric transpose only */ 151386a27549SJunchao Zhang /* Update L^T and do sptrsv symbolic */ 1514076ba34aSJunchao Zhang factors->iLt_d = MatRowMapKokkosView("factors->iLt_d",n+1); 151586a27549SJunchao Zhang Kokkos::deep_copy(factors->iLt_d,0); /* KK requires 0 */ 1516076ba34aSJunchao Zhang factors->jLt_d = MatColIdxKokkosView("factors->jLt_d",factors->jL_d.extent(0)); 1517076ba34aSJunchao Zhang factors->aLt_d = MatScalarKokkosView("factors->aLt_d",factors->aL_d.extent(0)); 151886a27549SJunchao Zhang 151986a27549SJunchao Zhang KokkosKernels::Impl::transpose_matrix< 1520076ba34aSJunchao Zhang ConstMatRowMapKokkosView,ConstMatColIdxKokkosView,ConstMatScalarKokkosView, 1521076ba34aSJunchao Zhang MatRowMapKokkosView,MatColIdxKokkosView,MatScalarKokkosView, 1522076ba34aSJunchao Zhang MatRowMapKokkosView,DefaultExecutionSpace>( 152386a27549SJunchao Zhang n,n,factors->iL_d,factors->jL_d,factors->aL_d, 152486a27549SJunchao Zhang factors->iLt_d,factors->jLt_d,factors->aLt_d); 152586a27549SJunchao Zhang 152686a27549SJunchao Zhang /* TODO: KK transpose_matrix() does not sort column indices, however cusparse requires sorted indices. 152786a27549SJunchao Zhang We have to sort the indices, until KK provides finer control options. 152886a27549SJunchao Zhang */ 1529076ba34aSJunchao Zhang KokkosKernels::sort_crs_matrix<DefaultExecutionSpace, 1530076ba34aSJunchao Zhang MatRowMapKokkosView,MatColIdxKokkosView,MatScalarKokkosView>( 153186a27549SJunchao Zhang factors->iLt_d,factors->jLt_d,factors->aLt_d); 153286a27549SJunchao Zhang 153386a27549SJunchao Zhang KokkosSparse::Experimental::sptrsv_symbolic(&factors->khLt,factors->iLt_d,factors->jLt_d,factors->aLt_d); 153486a27549SJunchao Zhang 153586a27549SJunchao Zhang /* Update U^T and do sptrsv symbolic */ 1536076ba34aSJunchao Zhang factors->iUt_d = MatRowMapKokkosView("factors->iUt_d",n+1); 153786a27549SJunchao Zhang Kokkos::deep_copy(factors->iUt_d,0); /* KK requires 0 */ 1538076ba34aSJunchao Zhang factors->jUt_d = MatColIdxKokkosView("factors->jUt_d",factors->jU_d.extent(0)); 1539076ba34aSJunchao Zhang factors->aUt_d = MatScalarKokkosView("factors->aUt_d",factors->aU_d.extent(0)); 154086a27549SJunchao Zhang 154186a27549SJunchao Zhang KokkosKernels::Impl::transpose_matrix< 1542076ba34aSJunchao Zhang ConstMatRowMapKokkosView,ConstMatColIdxKokkosView,ConstMatScalarKokkosView, 1543076ba34aSJunchao Zhang MatRowMapKokkosView,MatColIdxKokkosView,MatScalarKokkosView, 1544076ba34aSJunchao Zhang MatRowMapKokkosView,DefaultExecutionSpace>( 154586a27549SJunchao Zhang n,n,factors->iU_d, factors->jU_d, factors->aU_d, 154686a27549SJunchao Zhang factors->iUt_d,factors->jUt_d,factors->aUt_d); 154786a27549SJunchao Zhang 154886a27549SJunchao Zhang /* Sort indices. See comments above */ 1549076ba34aSJunchao Zhang KokkosKernels::sort_crs_matrix<DefaultExecutionSpace, 1550076ba34aSJunchao Zhang MatRowMapKokkosView,MatColIdxKokkosView,MatScalarKokkosView>( 155186a27549SJunchao Zhang factors->iUt_d,factors->jUt_d,factors->aUt_d); 155286a27549SJunchao Zhang 155386a27549SJunchao Zhang KokkosSparse::Experimental::sptrsv_symbolic(&factors->khUt,factors->iUt_d,factors->jUt_d,factors->aUt_d); 155486a27549SJunchao Zhang factors->transpose_updated = PETSC_TRUE; 155586a27549SJunchao Zhang } 155686a27549SJunchao Zhang PetscFunctionReturn(0); 155786a27549SJunchao Zhang } 155886a27549SJunchao Zhang 155986a27549SJunchao Zhang /* Solve Ax = b, with A = LU */ 156086a27549SJunchao Zhang static PetscErrorCode MatSolve_SeqAIJKokkos(Mat A,Vec b,Vec x) 156186a27549SJunchao Zhang { 156286a27549SJunchao Zhang ConstPetscScalarKokkosView bv; 156386a27549SJunchao Zhang PetscScalarKokkosView xv; 156486a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors*)A->spptr; 156586a27549SJunchao Zhang 156686a27549SJunchao Zhang PetscFunctionBegin; 15679566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 15689566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSymbolicSolveCheck(A)); 15699566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(b,&bv)); 15709566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(x,&xv)); 157186a27549SJunchao Zhang /* Solve L tmpv = b */ 15729566063dSJacob Faibussowitsch PetscCallCXX(KokkosSparse::Experimental::sptrsv_solve(&factors->khL,factors->iL_d,factors->jL_d,factors->aL_d,bv,factors->workVector)); 157386a27549SJunchao Zhang /* Solve Ux = tmpv */ 15749566063dSJacob Faibussowitsch PetscCallCXX(KokkosSparse::Experimental::sptrsv_solve(&factors->khU,factors->iU_d,factors->jU_d,factors->aU_d,factors->workVector,xv)); 15759566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(b,&bv)); 15769566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(x,&xv)); 15779566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 157886a27549SJunchao Zhang PetscFunctionReturn(0); 157986a27549SJunchao Zhang } 158086a27549SJunchao Zhang 1581076ba34aSJunchao Zhang /* Solve A^T x = b, where A^T = U^T L^T */ 158286a27549SJunchao Zhang static PetscErrorCode MatSolveTranspose_SeqAIJKokkos(Mat A,Vec b,Vec x) 158386a27549SJunchao Zhang { 158486a27549SJunchao Zhang ConstPetscScalarKokkosView bv; 158586a27549SJunchao Zhang PetscScalarKokkosView xv; 158686a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors*)A->spptr; 158786a27549SJunchao Zhang 158886a27549SJunchao Zhang PetscFunctionBegin; 15899566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 15909566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosTransposeSolveCheck(A)); 15919566063dSJacob Faibussowitsch PetscCall(VecGetKokkosView(b,&bv)); 15929566063dSJacob Faibussowitsch PetscCall(VecGetKokkosViewWrite(x,&xv)); 159386a27549SJunchao Zhang /* Solve U^T tmpv = b */ 159486a27549SJunchao Zhang KokkosSparse::Experimental::sptrsv_solve(&factors->khUt,factors->iUt_d,factors->jUt_d,factors->aUt_d,bv,factors->workVector); 159586a27549SJunchao Zhang 159686a27549SJunchao Zhang /* Solve L^T x = tmpv */ 159786a27549SJunchao Zhang KokkosSparse::Experimental::sptrsv_solve(&factors->khLt,factors->iLt_d,factors->jLt_d,factors->aLt_d,factors->workVector,xv); 15989566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosView(b,&bv)); 15999566063dSJacob Faibussowitsch PetscCall(VecRestoreKokkosViewWrite(x,&xv)); 16009566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 160186a27549SJunchao Zhang PetscFunctionReturn(0); 160286a27549SJunchao Zhang } 160386a27549SJunchao Zhang 160486a27549SJunchao Zhang static PetscErrorCode MatILUFactorNumeric_SeqAIJKokkos(Mat B,Mat A,const MatFactorInfo *info) 160586a27549SJunchao Zhang { 160686a27549SJunchao Zhang Mat_SeqAIJKokkos *aijkok = (Mat_SeqAIJKokkos*)A->spptr; 160786a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors*)B->spptr; 160886a27549SJunchao Zhang PetscInt fill_lev = info->levels; 160986a27549SJunchao Zhang 161086a27549SJunchao Zhang PetscFunctionBegin; 16119566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeBegin()); 16129566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 1613076ba34aSJunchao Zhang 1614076ba34aSJunchao Zhang auto a_d = aijkok->a_dual.view_device(); 1615076ba34aSJunchao Zhang auto i_d = aijkok->i_dual.view_device(); 1616076ba34aSJunchao Zhang auto j_d = aijkok->j_dual.view_device(); 1617076ba34aSJunchao Zhang 1618076ba34aSJunchao Zhang KokkosSparse::Experimental::spiluk_numeric(&factors->kh,fill_lev,i_d,j_d,a_d,factors->iL_d,factors->jL_d,factors->aL_d,factors->iU_d,factors->jU_d,factors->aU_d); 161986a27549SJunchao Zhang 162086a27549SJunchao Zhang B->assembled = PETSC_TRUE; 162186a27549SJunchao Zhang B->preallocated = PETSC_TRUE; 162286a27549SJunchao Zhang B->ops->solve = MatSolve_SeqAIJKokkos; 162386a27549SJunchao Zhang B->ops->solvetranspose = MatSolveTranspose_SeqAIJKokkos; 162486a27549SJunchao Zhang B->ops->matsolve = NULL; 162586a27549SJunchao Zhang B->ops->matsolvetranspose = NULL; 162686a27549SJunchao Zhang B->offloadmask = PETSC_OFFLOAD_GPU; 162786a27549SJunchao Zhang 162886a27549SJunchao Zhang /* Once the factors' value changed, we need to update their transpose and sptrsv handle */ 162986a27549SJunchao Zhang factors->transpose_updated = PETSC_FALSE; 163086a27549SJunchao Zhang factors->sptrsv_symbolic_completed = PETSC_FALSE; 1631eeadb341SJunchao Zhang /* TODO: log flops, but how to know that? */ 16329566063dSJacob Faibussowitsch PetscCall(PetscLogGpuTimeEnd()); 163386a27549SJunchao Zhang PetscFunctionReturn(0); 163486a27549SJunchao Zhang } 163586a27549SJunchao Zhang 163686a27549SJunchao Zhang static PetscErrorCode MatILUFactorSymbolic_SeqAIJKokkos(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 163786a27549SJunchao Zhang { 163886a27549SJunchao Zhang Mat_SeqAIJKokkos *aijkok; 163986a27549SJunchao Zhang Mat_SeqAIJ *b; 164086a27549SJunchao Zhang Mat_SeqAIJKokkosTriFactors *factors = (Mat_SeqAIJKokkosTriFactors*)B->spptr; 164186a27549SJunchao Zhang PetscInt fill_lev = info->levels; 164286a27549SJunchao Zhang PetscInt nnzA = ((Mat_SeqAIJ*)A->data)->nz,nnzL,nnzU; 164386a27549SJunchao Zhang PetscInt n = A->rmap->n; 164486a27549SJunchao Zhang 164586a27549SJunchao Zhang PetscFunctionBegin; 16469566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); 164786a27549SJunchao Zhang /* Rebuild factors */ 164886a27549SJunchao Zhang if (factors) {factors->Destroy();} /* Destroy the old if it exists */ 164986a27549SJunchao Zhang else {B->spptr = factors = new Mat_SeqAIJKokkosTriFactors(n);} 165086a27549SJunchao Zhang 165186a27549SJunchao Zhang /* Create a spiluk handle and then do symbolic factorization */ 165286a27549SJunchao Zhang nnzL = nnzU = PetscRealIntMultTruncate(info->fill,nnzA); 165386a27549SJunchao Zhang factors->kh.create_spiluk_handle(KokkosSparse::Experimental::SPILUKAlgorithm::SEQLVLSCHD_TP1,n,nnzL,nnzU); 165486a27549SJunchao Zhang 165586a27549SJunchao Zhang auto spiluk_handle = factors->kh.get_spiluk_handle(); 165686a27549SJunchao Zhang 165786a27549SJunchao Zhang Kokkos::realloc(factors->iL_d,n+1); /* Free old arrays and realloc */ 165886a27549SJunchao Zhang Kokkos::realloc(factors->jL_d,spiluk_handle->get_nnzL()); 165986a27549SJunchao Zhang Kokkos::realloc(factors->iU_d,n+1); 166086a27549SJunchao Zhang Kokkos::realloc(factors->jU_d,spiluk_handle->get_nnzU()); 166186a27549SJunchao Zhang 166286a27549SJunchao Zhang aijkok = (Mat_SeqAIJKokkos*)A->spptr; 1663076ba34aSJunchao Zhang auto i_d = aijkok->i_dual.view_device(); 1664076ba34aSJunchao Zhang auto j_d = aijkok->j_dual.view_device(); 1665076ba34aSJunchao Zhang KokkosSparse::Experimental::spiluk_symbolic(&factors->kh,fill_lev,i_d,j_d,factors->iL_d,factors->jL_d,factors->iU_d,factors->jU_d); 166686a27549SJunchao Zhang /* TODO: if spiluk_symbolic is asynchronous, do we need to sync before calling get_nnzL()? */ 166786a27549SJunchao Zhang 166886a27549SJunchao Zhang Kokkos::resize (factors->jL_d,spiluk_handle->get_nnzL()); /* Shrink or expand, and retain old value */ 166986a27549SJunchao Zhang Kokkos::resize (factors->jU_d,spiluk_handle->get_nnzU()); 167086a27549SJunchao Zhang Kokkos::realloc(factors->aL_d,spiluk_handle->get_nnzL()); /* No need to retain old value */ 167186a27549SJunchao Zhang Kokkos::realloc(factors->aU_d,spiluk_handle->get_nnzU()); 167286a27549SJunchao Zhang 167386a27549SJunchao Zhang /* TODO: add options to select sptrsv algorithms */ 167486a27549SJunchao Zhang /* Create sptrsv handles for L, U and their transpose */ 167586a27549SJunchao Zhang #if defined(KOKKOSKERNELS_ENABLE_TPL_CUSPARSE) 167686a27549SJunchao Zhang auto sptrsv_alg = KokkosSparse::Experimental::SPTRSVAlgorithm::SPTRSV_CUSPARSE; 167786a27549SJunchao Zhang #else 167886a27549SJunchao Zhang auto sptrsv_alg = KokkosSparse::Experimental::SPTRSVAlgorithm::SEQLVLSCHD_TP1; 167986a27549SJunchao Zhang #endif 168086a27549SJunchao Zhang 168186a27549SJunchao Zhang factors->khL.create_sptrsv_handle(sptrsv_alg,n,true/* L is lower tri */); 168286a27549SJunchao Zhang factors->khU.create_sptrsv_handle(sptrsv_alg,n,false/* U is not lower tri */); 168386a27549SJunchao Zhang factors->khLt.create_sptrsv_handle(sptrsv_alg,n,false/* L^T is not lower tri */); 168486a27549SJunchao Zhang factors->khUt.create_sptrsv_handle(sptrsv_alg,n,true/* U^T is lower tri */); 168586a27549SJunchao Zhang 168686a27549SJunchao Zhang /* Fill fields of the factor matrix B */ 16879566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation_SeqAIJ(B,MAT_SKIP_ALLOCATION,NULL)); 168886a27549SJunchao Zhang b = (Mat_SeqAIJ*)B->data; 168986a27549SJunchao Zhang b->nz = b->maxnz = spiluk_handle->get_nnzL()+spiluk_handle->get_nnzU(); 169086a27549SJunchao Zhang B->info.fill_ratio_given = info->fill; 169186a27549SJunchao Zhang B->info.fill_ratio_needed = ((PetscReal)b->nz)/((PetscReal)nnzA); 169286a27549SJunchao Zhang 169386a27549SJunchao Zhang B->offloadmask = PETSC_OFFLOAD_GPU; 169486a27549SJunchao Zhang B->ops->lufactornumeric = MatILUFactorNumeric_SeqAIJKokkos; 1695930e68a5SMark Adams PetscFunctionReturn(0); 1696930e68a5SMark Adams } 1697930e68a5SMark Adams 16988f7e8f9dSMark Adams static PetscErrorCode MatLUFactorSymbolic_SeqAIJKOKKOSDEVICE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 16998f7e8f9dSMark Adams { 17008f7e8f9dSMark Adams Mat_SeqAIJ *b=(Mat_SeqAIJ*)B->data; 17018f7e8f9dSMark Adams const PetscInt nrows = A->rmap->n; 1702930e68a5SMark Adams 17038f7e8f9dSMark Adams PetscFunctionBegin; 17049566063dSJacob Faibussowitsch PetscCall(MatLUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info)); 17058f7e8f9dSMark Adams B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJKOKKOSDEVICE; 17068f7e8f9dSMark Adams // move B data into Kokkos 17079566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(B)); // create aijkok 17089566063dSJacob Faibussowitsch PetscCall(MatSeqAIJKokkosSyncDevice(A)); // create aijkok 17098f7e8f9dSMark Adams { 17108f7e8f9dSMark Adams Mat_SeqAIJKokkos *baijkok = static_cast<Mat_SeqAIJKokkos*>(B->spptr); 1711300d22a6SJunchao Zhang if (!baijkok->diag_d.extent(0)) { 17128f7e8f9dSMark Adams const Kokkos::View<PetscInt*, Kokkos::HostSpace, Kokkos::MemoryTraits<Kokkos::Unmanaged> > h_diag (b->diag,nrows+1); 1713300d22a6SJunchao Zhang baijkok->diag_d = Kokkos::View<PetscInt*>(Kokkos::create_mirror(DefaultMemorySpace(),h_diag)); 1714300d22a6SJunchao Zhang Kokkos::deep_copy (baijkok->diag_d, h_diag); 17158f7e8f9dSMark Adams } 17168f7e8f9dSMark Adams } 17178f7e8f9dSMark Adams PetscFunctionReturn(0); 17188f7e8f9dSMark Adams } 17198f7e8f9dSMark Adams 172086a27549SJunchao Zhang static PetscErrorCode MatFactorGetSolverType_SeqAIJKokkos(Mat A,MatSolverType *type) 1721930e68a5SMark Adams { 1722930e68a5SMark Adams PetscFunctionBegin; 1723930e68a5SMark Adams *type = MATSOLVERKOKKOS; 1724930e68a5SMark Adams PetscFunctionReturn(0); 1725930e68a5SMark Adams } 1726930e68a5SMark Adams 17278f7e8f9dSMark Adams static PetscErrorCode MatFactorGetSolverType_seqaij_kokkos_device(Mat A,MatSolverType *type) 17288f7e8f9dSMark Adams { 17298f7e8f9dSMark Adams PetscFunctionBegin; 17308f7e8f9dSMark Adams *type = MATSOLVERKOKKOSDEVICE; 17318f7e8f9dSMark Adams PetscFunctionReturn(0); 17328f7e8f9dSMark Adams } 17338f7e8f9dSMark Adams 1734930e68a5SMark Adams /*MC 173586a27549SJunchao Zhang MATSOLVERKOKKOS = "Kokkos" - A matrix solver type providing triangular solvers for sequential matrices 173686a27549SJunchao Zhang on a single GPU of type, SeqAIJKokkos, AIJKokkos. 1737930e68a5SMark Adams 1738930e68a5SMark Adams Level: beginner 1739930e68a5SMark Adams 1740db781477SPatrick Sanan .seealso: `PCFactorSetMatSolverType()`, `MatSolverType`, `MatCreateSeqAIJKokkos()`, `MATAIJKOKKOS`, `MatKokkosSetFormat()`, `MatKokkosStorageFormat`, `MatKokkosFormatOperation` 1741930e68a5SMark Adams M*/ 174286a27549SJunchao Zhang PETSC_EXTERN PetscErrorCode MatGetFactor_SeqAIJKokkos_Kokkos(Mat A,MatFactorType ftype,Mat *B) /* MatGetFactor_<MatType>_<MatSolverType> */ 1743930e68a5SMark Adams { 1744930e68a5SMark Adams PetscInt n = A->rmap->n; 1745930e68a5SMark Adams 1746930e68a5SMark Adams PetscFunctionBegin; 17479566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A),B)); 17489566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*B,n,n,n,n)); 1749930e68a5SMark Adams (*B)->factortype = ftype; 17509566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_LU])); 17519566063dSJacob Faibussowitsch PetscCall(MatSetType(*B,MATSEQAIJKOKKOS)); 1752930e68a5SMark Adams 17538f7e8f9dSMark Adams if (ftype == MAT_FACTOR_LU) { 17549566063dSJacob Faibussowitsch PetscCall(MatSetBlockSizesFromMats(*B,A,A)); 175586a27549SJunchao Zhang (*B)->canuseordering = PETSC_TRUE; 175686a27549SJunchao Zhang (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJKokkos; 175786a27549SJunchao Zhang } else if (ftype == MAT_FACTOR_ILU) { 17589566063dSJacob Faibussowitsch PetscCall(MatSetBlockSizesFromMats(*B,A,A)); 175986a27549SJunchao Zhang (*B)->canuseordering = PETSC_FALSE; 176086a27549SJunchao Zhang (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJKokkos; 176198921bdaSJacob Faibussowitsch } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MatFactorType %s is not supported by MatType SeqAIJKokkos", MatFactorTypes[ftype]); 1762930e68a5SMark Adams 17639566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation(*B,MAT_SKIP_ALLOCATION,NULL)); 17649566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)(*B),"MatFactorGetSolverType_C",MatFactorGetSolverType_SeqAIJKokkos)); 1765930e68a5SMark Adams PetscFunctionReturn(0); 1766930e68a5SMark Adams } 17678f7e8f9dSMark Adams 17688f7e8f9dSMark Adams PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijkokkos_kokkos_device(Mat A,MatFactorType ftype,Mat *B) 17698f7e8f9dSMark Adams { 17708f7e8f9dSMark Adams PetscInt n = A->rmap->n; 17718f7e8f9dSMark Adams 17728f7e8f9dSMark Adams PetscFunctionBegin; 17739566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A),B)); 17749566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*B,n,n,n,n)); 17758f7e8f9dSMark Adams (*B)->factortype = ftype; 1776f73b0415SBarry Smith (*B)->canuseordering = PETSC_TRUE; 17779566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(MATORDERINGND,(char**)&(*B)->preferredordering[MAT_FACTOR_LU])); 17789566063dSJacob Faibussowitsch PetscCall(MatSetType(*B,MATSEQAIJKOKKOS)); 17798f7e8f9dSMark Adams 17808f7e8f9dSMark Adams if (ftype == MAT_FACTOR_LU) { 17819566063dSJacob Faibussowitsch PetscCall(MatSetBlockSizesFromMats(*B,A,A)); 17828f7e8f9dSMark Adams (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJKOKKOSDEVICE; 17838f7e8f9dSMark Adams } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Factor type not supported for KOKKOS Matrix Types"); 17848f7e8f9dSMark Adams 17859566063dSJacob Faibussowitsch PetscCall(MatSeqAIJSetPreallocation(*B,MAT_SKIP_ALLOCATION,NULL)); 17869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)(*B),"MatFactorGetSolverType_C",MatFactorGetSolverType_seqaij_kokkos_device)); 17878f7e8f9dSMark Adams PetscFunctionReturn(0); 17888f7e8f9dSMark Adams } 178986a27549SJunchao Zhang 179086a27549SJunchao Zhang PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_KOKKOS(void) 179186a27549SJunchao Zhang { 179286a27549SJunchao Zhang PetscFunctionBegin; 17939566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS,MATSEQAIJKOKKOS,MAT_FACTOR_LU,MatGetFactor_SeqAIJKokkos_Kokkos)); 17949566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOS,MATSEQAIJKOKKOS,MAT_FACTOR_ILU,MatGetFactor_SeqAIJKokkos_Kokkos)); 17959566063dSJacob Faibussowitsch PetscCall(MatSolverTypeRegister(MATSOLVERKOKKOSDEVICE,MATSEQAIJKOKKOS,MAT_FACTOR_LU,MatGetFactor_seqaijkokkos_kokkos_device)); 179686a27549SJunchao Zhang PetscFunctionReturn(0); 179786a27549SJunchao Zhang } 179886a27549SJunchao Zhang 1799076ba34aSJunchao Zhang /* Utility to print out a KokkosCsrMatrix for debugging */ 1800076ba34aSJunchao Zhang PETSC_INTERN PetscErrorCode PrintCsrMatrix(const KokkosCsrMatrix& csrmat) 1801076ba34aSJunchao Zhang { 1802076ba34aSJunchao Zhang const auto& iv = Kokkos::create_mirror_view_and_copy(Kokkos::HostSpace(),csrmat.graph.row_map); 1803076ba34aSJunchao Zhang const auto& jv = Kokkos::create_mirror_view_and_copy(Kokkos::HostSpace(),csrmat.graph.entries); 1804076ba34aSJunchao Zhang const auto& av = Kokkos::create_mirror_view_and_copy(Kokkos::HostSpace(),csrmat.values); 1805076ba34aSJunchao Zhang const PetscInt *i = iv.data(); 1806076ba34aSJunchao Zhang const PetscInt *j = jv.data(); 1807076ba34aSJunchao Zhang const PetscScalar *a = av.data(); 1808076ba34aSJunchao Zhang PetscInt m = csrmat.numRows(),n = csrmat.numCols(),nnz = csrmat.nnz(); 1809076ba34aSJunchao Zhang 1810076ba34aSJunchao Zhang PetscFunctionBegin; 18119566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF,"%" PetscInt_FMT " x %" PetscInt_FMT " SeqAIJKokkos, with %" PetscInt_FMT " nonzeros\n",m,n,nnz)); 1812076ba34aSJunchao Zhang for (PetscInt k=0; k<m; k++) { 18139566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF,"%" PetscInt_FMT ": ",k)); 1814076ba34aSJunchao Zhang for (PetscInt p=i[k]; p<i[k+1]; p++) { 181563a3b9bcSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF,"%" PetscInt_FMT "(%.1f), ",j[p],(double)PetscRealPart(a[p]))); 1816076ba34aSJunchao Zhang } 18179566063dSJacob Faibussowitsch PetscCall(PetscPrintf(PETSC_COMM_SELF,"\n")); 1818076ba34aSJunchao Zhang } 1819076ba34aSJunchao Zhang PetscFunctionReturn(0); 1820076ba34aSJunchao Zhang } 1821