xref: /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c (revision 03d5a6932962f2e558bdc398ee6d38f550cdb0f3)
1 #if defined(PETSC_HAVE_LIBMKL_INTEL_ILP64)
2 #define MKL_ILP64
3 #endif
4 
5 #include <../src/mat/impls/aij/seq/aij.h>        /*I "petscmat.h" I*/
6 #include <../src/mat/impls/sbaij/seq/sbaij.h>
7 #include <../src/mat/impls/dense/seq/dense.h>
8 #include <petscblaslapack.h>
9 
10 #include <stdio.h>
11 #include <stdlib.h>
12 #include <math.h>
13 #include <mkl.h>
14 
15 /*
16  *  Possible mkl_pardiso phases that controls the execution of the solver.
17  *  For more information check mkl_pardiso manual.
18  */
19 #define JOB_ANALYSIS 11
20 #define JOB_ANALYSIS_NUMERICAL_FACTORIZATION 12
21 #define JOB_ANALYSIS_NUMERICAL_FACTORIZATION_SOLVE_ITERATIVE_REFINEMENT 13
22 #define JOB_NUMERICAL_FACTORIZATION 22
23 #define JOB_NUMERICAL_FACTORIZATION_SOLVE_ITERATIVE_REFINEMENT 23
24 #define JOB_SOLVE_ITERATIVE_REFINEMENT 33
25 #define JOB_SOLVE_FORWARD_SUBSTITUTION 331
26 #define JOB_SOLVE_DIAGONAL_SUBSTITUTION 332
27 #define JOB_SOLVE_BACKWARD_SUBSTITUTION 333
28 #define JOB_RELEASE_OF_LU_MEMORY 0
29 #define JOB_RELEASE_OF_ALL_MEMORY -1
30 
31 #define IPARM_SIZE 64
32 
33 #if defined(PETSC_USE_64BIT_INDICES)
34  #if defined(PETSC_HAVE_LIBMKL_INTEL_ILP64)
35   /* sizeof(MKL_INT) == sizeof(long long int) if ilp64*/
36   #define INT_TYPE long long int
37   #define MKL_PARDISO pardiso
38   #define MKL_PARDISO_INIT pardisoinit
39  #else
40   #define INT_TYPE long long int
41   #define MKL_PARDISO pardiso_64
42   #define MKL_PARDISO_INIT pardiso_64init
43  #endif
44 #else
45  #define INT_TYPE int
46  #define MKL_PARDISO pardiso
47  #define MKL_PARDISO_INIT pardisoinit
48 #endif
49 
50 
51 /*
52  *  Internal data structure.
53  *  For more information check mkl_pardiso manual.
54  */
55 typedef struct {
56 
57   /* Configuration vector*/
58   INT_TYPE     iparm[IPARM_SIZE];
59 
60   /*
61    * Internal mkl_pardiso memory location.
62    * After the first call to mkl_pardiso do not modify pt, as that could cause a serious memory leak.
63    */
64   void         *pt[IPARM_SIZE];
65 
66   /* Basic mkl_pardiso info*/
67   INT_TYPE     phase, maxfct, mnum, mtype, n, nrhs, msglvl, err;
68 
69   /* Matrix structure*/
70   void         *a;
71   INT_TYPE     *ia, *ja;
72 
73   /* Number of non-zero elements*/
74   INT_TYPE     nz;
75 
76   /* Row permutaton vector*/
77   INT_TYPE     *perm;
78 
79   /* Define if matrix preserves sparse structure.*/
80   MatStructure matstruc;
81 
82   PetscBool    needsym;
83   PetscBool    freeaij;
84 
85   /* Schur complement */
86   PetscScalar  *schur;
87   PetscInt     schur_size;
88   PetscInt     *schur_idxs;
89   PetscScalar  *schur_work;
90   PetscBLASInt schur_work_size;
91   PetscInt     schur_solver_type;
92   PetscInt     *schur_pivots;
93   PetscBool    schur_factored;
94   PetscBool    schur_inverted;
95   PetscBool    solve_interior;
96 
97   /* True if mkl_pardiso function have been used.*/
98   PetscBool CleanUp;
99 
100   /* Conversion to a format suitable for MKL */
101   PetscErrorCode (*Convert)(Mat, PetscBool, MatReuse, PetscBool*, INT_TYPE*, INT_TYPE**, INT_TYPE**, void**);
102   PetscErrorCode (*Destroy)(Mat);
103 } Mat_MKL_PARDISO;
104 
105 #undef __FUNCT__
106 #define __FUNCT__ "MatMKLPardiso_Convert_seqsbaij"
107 PetscErrorCode MatMKLPardiso_Convert_seqsbaij(Mat A,PetscBool sym,MatReuse reuse,PetscBool *free,INT_TYPE *nnz,INT_TYPE **r,INT_TYPE **c,void **v)
108 {
109   Mat_SeqSBAIJ   *aa = (Mat_SeqSBAIJ*)A->data;
110   PetscInt       bs  = A->rmap->bs;
111 
112   PetscFunctionBegin;
113   if (!sym) {
114     SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"This should not happen");
115   }
116   if (bs == 1) { /* already in the correct format */
117     *v    = aa->a;
118     *r    = aa->i;
119     *c    = aa->j;
120     *nnz  = aa->nz;
121     *free = PETSC_FALSE;
122   } else {
123     SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Conversion from SeqSBAIJ to MKL Pardiso format still need to be implemented");
124   }
125   PetscFunctionReturn(0);
126 }
127 
128 #undef __FUNCT__
129 #define __FUNCT__ "MatMKLPardiso_Convert_seqbaij"
130 PetscErrorCode MatMKLPardiso_Convert_seqbaij(Mat A,PetscBool sym,MatReuse reuse,PetscBool *free,INT_TYPE *nnz,INT_TYPE **r,INT_TYPE **c,void **v)
131 {
132   Mat_SeqBAIJ    *aa=(Mat_SeqBAIJ*)A->data;
133   PetscFunctionBegin;
134   SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Conversion from SeqBAIJ to MKL Pardiso format still need to be implemented");
135   PetscFunctionReturn(0);
136 }
137 
138 #undef __FUNCT__
139 #define __FUNCT__ "MatMKLPardiso_Convert_seqaij"
140 PetscErrorCode MatMKLPardiso_Convert_seqaij(Mat A,PetscBool sym,MatReuse reuse,PetscBool *free,INT_TYPE *nnz,INT_TYPE **r,INT_TYPE **c,void **v)
141 {
142   Mat_SeqAIJ     *aa = (Mat_SeqAIJ*)A->data;
143   PetscErrorCode ierr;
144 
145   PetscFunctionBegin;
146   if (!sym) { /* already in the correct format */
147     *v    = aa->a;
148     *r    = aa->i;
149     *c    = aa->j;
150     *nnz  = aa->nz;
151     *free = PETSC_FALSE;
152     PetscFunctionReturn(0);
153   }
154   /* need to get the triangular part */
155   if (reuse == MAT_INITIAL_MATRIX) {
156     PetscScalar *vals,*vv;
157     PetscInt    *row,*col,*jj;
158     PetscInt    m = A->rmap->n,nz,i;
159 
160     nz = 0;
161     for (i=0; i<m; i++) {
162       nz += aa->i[i+1] - aa->diag[i];
163     }
164     ierr = PetscMalloc2(m+1,&row,nz,&col);CHKERRQ(ierr);
165     ierr = PetscMalloc1(nz,&vals);CHKERRQ(ierr);
166     jj = col;
167     vv = vals;
168 
169     row[0] = 0;
170     for (i=0; i<m; i++) {
171       PetscInt    *aj = aa->j + aa->diag[i];
172       PetscScalar *av = aa->a + aa->diag[i];
173       PetscInt    rl = aa->i[i+1] - aa->diag[i],j;
174       for (j=0; j<rl; j++) {
175         *jj = *aj; jj++; aj++;
176         *vv = *av; vv++; av++;
177       }
178       row[i+1]    = row[i] + rl;
179     }
180     *v    = vals;
181     *r    = row;
182     *c    = col;
183     *nnz  = nz;
184     *free = PETSC_TRUE;
185   } else {
186     PetscScalar *vv;
187     PetscInt    m = A->rmap->n,i;
188 
189     vv = *v;
190     for (i=0; i<m; i++) {
191       PetscInt    *aj = aa->j + aa->diag[i];
192       PetscScalar *av = aa->a + aa->diag[i];
193       PetscInt    rl = aa->i[i+1] - aa->diag[i],j;
194       for (j=0; j<rl; j++) {
195         *vv = *av; vv++; av++;
196       }
197     }
198     *free = PETSC_TRUE;
199   }
200   PetscFunctionReturn(0);
201 }
202 
203 void pardiso_64init(void *pt, INT_TYPE *mtype, INT_TYPE iparm [])
204 {
205   int iparm_copy[IPARM_SIZE], mtype_copy, i;
206 
207   mtype_copy = *mtype;
208   pardisoinit(pt, &mtype_copy, iparm_copy);
209   for(i = 0; i < IPARM_SIZE; i++){
210     iparm[i] = iparm_copy[i];
211   }
212 }
213 
214 #undef __FUNCT__
215 #define __FUNCT__ "MatMKLPardisoFactorSchur_Private"
216 static PetscErrorCode MatMKLPardisoFactorSchur_Private(Mat_MKL_PARDISO* mpardiso)
217 {
218   PetscBLASInt   B_N,B_ierr;
219   PetscErrorCode ierr;
220 
221   PetscFunctionBegin;
222   if (mpardiso->schur_factored) {
223     PetscFunctionReturn(0);
224   }
225   ierr = PetscBLASIntCast(mpardiso->schur_size,&B_N);CHKERRQ(ierr);
226   switch (mpardiso->schur_solver_type) {
227     case 1: /* symmetric */
228       if (!mpardiso->schur_pivots) {
229         ierr = PetscMalloc1(B_N,&mpardiso->schur_pivots);CHKERRQ(ierr);
230       }
231       ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
232       PetscStackCallBLAS("LAPACKsytrf",LAPACKsytrf_("L",&B_N,mpardiso->schur,&B_N,mpardiso->schur_pivots,mpardiso->schur_work,&mpardiso->schur_work_size,&B_ierr));
233       ierr = PetscFPTrapPop();CHKERRQ(ierr);
234       if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in SYTRF Lapack routine %d",(int)B_ierr);
235       break;
236     case 2: /* hermitian solver */
237       ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
238       PetscStackCallBLAS("LAPACKpotrf",LAPACKpotrf_("L",&B_N,mpardiso->schur,&B_N,&B_ierr));
239       ierr = PetscFPTrapPop();CHKERRQ(ierr);
240       if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in POTRF Lapack routine %d",(int)B_ierr);
241       break;
242     default: /* general */
243       if (!mpardiso->schur_pivots) {
244         ierr = PetscMalloc1(B_N,&mpardiso->schur_pivots);CHKERRQ(ierr);
245       }
246       ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
247       PetscStackCallBLAS("LAPACKgetrf",LAPACKgetrf_(&B_N,&B_N,mpardiso->schur,&B_N,mpardiso->schur_pivots,&B_ierr));
248       ierr = PetscFPTrapPop();CHKERRQ(ierr);
249       if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in GETRF Lapack routine %d",(int)B_ierr);
250       break;
251   }
252   mpardiso->schur_factored = PETSC_TRUE;
253   PetscFunctionReturn(0);
254 }
255 
256 #undef __FUNCT__
257 #define __FUNCT__ "MatMKLPardisoInvertSchur_Private"
258 static PetscErrorCode MatMKLPardisoInvertSchur_Private(Mat_MKL_PARDISO* mpardiso)
259 {
260   PetscBLASInt   B_N,B_ierr;
261   PetscErrorCode ierr;
262 
263   PetscFunctionBegin;
264   ierr = MatMKLPardisoFactorSchur_Private(mpardiso);CHKERRQ(ierr);
265   ierr = PetscBLASIntCast(mpardiso->schur_size,&B_N);CHKERRQ(ierr);
266   switch (mpardiso->schur_solver_type) {
267     case 1: /* symmetric */
268       ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
269       PetscStackCallBLAS("LAPACKsytri",LAPACKsytri_("L",&B_N,mpardiso->schur,&B_N,mpardiso->schur_pivots,mpardiso->schur_work,&B_ierr));
270       ierr = PetscFPTrapPop();CHKERRQ(ierr);
271       if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in SYTRI Lapack routine %d",(int)B_ierr);
272       break;
273     case 2: /* hermitian solver */
274       ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
275       PetscStackCallBLAS("LAPACKpotri",LAPACKpotri_("L",&B_N,mpardiso->schur,&B_N,&B_ierr));
276       ierr = PetscFPTrapPop();CHKERRQ(ierr);
277       if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in POTRI Lapack routine %d",(int)B_ierr);
278       break;
279     default: /* general */
280       ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
281       PetscStackCallBLAS("LAPACKgetri",LAPACKgetri_(&B_N,mpardiso->schur,&B_N,mpardiso->schur_pivots,mpardiso->schur_work,&mpardiso->schur_work_size,&B_ierr));
282       ierr = PetscFPTrapPop();CHKERRQ(ierr);
283       if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in GETRI Lapack routine %d",(int)B_ierr);
284       break;
285   }
286   mpardiso->schur_inverted = PETSC_TRUE;
287   PetscFunctionReturn(0);
288 }
289 
290 #undef __FUNCT__
291 #define __FUNCT__ "MatMKLPardisoSolveSchur_Private"
292 static PetscErrorCode MatMKLPardisoSolveSchur_Private(Mat_MKL_PARDISO* mpardiso, PetscScalar *B, PetscScalar *X)
293 {
294   PetscScalar    one=1.,zero=0.,*schur_rhs,*schur_sol;
295   PetscBLASInt   B_N,B_Nrhs,B_ierr;
296   char           type[2];
297   PetscErrorCode ierr;
298 
299   PetscFunctionBegin;
300   ierr = MatMKLPardisoFactorSchur_Private(mpardiso);CHKERRQ(ierr);
301   ierr = PetscBLASIntCast(mpardiso->schur_size,&B_N);CHKERRQ(ierr);
302   ierr = PetscBLASIntCast(mpardiso->nrhs,&B_Nrhs);CHKERRQ(ierr);
303   if (X == B && mpardiso->schur_inverted) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"X and B cannot point to the same address");
304   if (X != B) { /* using LAPACK *TRS subroutines */
305     ierr = PetscMemcpy(X,B,B_N*B_Nrhs*sizeof(PetscScalar));CHKERRQ(ierr);
306   }
307   schur_rhs = B;
308   schur_sol = X;
309   switch (mpardiso->schur_solver_type) {
310     case 1: /* symmetric solver */
311       if (mpardiso->schur_inverted) {
312         PetscStackCallBLAS("BLASsymm",BLASsymm_("L","L",&B_N,&B_Nrhs,&one,mpardiso->schur,&B_N,schur_rhs,&B_N,&zero,schur_sol,&B_N));
313       } else {
314         ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
315         PetscStackCallBLAS("LAPACKsytrs",LAPACKsytrs_("L",&B_N,&B_Nrhs,mpardiso->schur,&B_N,mpardiso->schur_pivots,schur_sol,&B_N,&B_ierr));
316         ierr = PetscFPTrapPop();CHKERRQ(ierr);
317         if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in SYTRS Lapack routine %d",(int)B_ierr);
318       }
319       break;
320     case 2: /* hermitian solver */
321       if (mpardiso->schur_inverted) { /* BLAShemm should go here */
322         PetscStackCallBLAS("BLASsymm",BLASsymm_("L","L",&B_N,&B_Nrhs,&one,mpardiso->schur,&B_N,schur_rhs,&B_N,&zero,schur_sol,&B_N));
323       } else {
324         ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
325         PetscStackCallBLAS("LAPACKpotrs",LAPACKpotrs_("L",&B_N,&B_Nrhs,mpardiso->schur,&B_N,schur_sol,&B_N,&B_ierr));
326         ierr = PetscFPTrapPop();CHKERRQ(ierr);
327         if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in POTRS Lapack routine %d",(int)B_ierr);
328       }
329       break;
330     default: /* general */
331       switch (mpardiso->iparm[12-1]) {
332         case 1:
333           sprintf(type,"C");
334           break;
335         case 2:
336           sprintf(type,"T");
337           break;
338         default:
339           sprintf(type,"N");
340           break;
341       }
342       if (mpardiso->schur_inverted) {
343         PetscStackCallBLAS("BLASgemm",BLASgemm_(type,"N",&B_N,&B_Nrhs,&B_N,&one,mpardiso->schur,&B_N,schur_rhs,&B_N,&zero,schur_sol,&B_N));
344       } else {
345         ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
346         PetscStackCallBLAS("LAPACKgetrs",LAPACKgetrs_(type,&B_N,&B_Nrhs,mpardiso->schur,&B_N,mpardiso->schur_pivots,schur_sol,&B_N,&B_ierr));
347         ierr = PetscFPTrapPop();CHKERRQ(ierr);
348         if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in GETRS Lapack routine %d",(int)B_ierr);
349       }
350       break;
351   }
352   PetscFunctionReturn(0);
353 }
354 
355 
356 #undef __FUNCT__
357 #define __FUNCT__ "MatFactorSetSchurIS_MKL_PARDISO"
358 PetscErrorCode MatFactorSetSchurIS_MKL_PARDISO(Mat F, IS is)
359 {
360   Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr;
361   const PetscInt  *idxs;
362   PetscInt        size,i;
363   PetscMPIInt     csize;
364   PetscErrorCode  ierr;
365 
366   PetscFunctionBegin;
367   ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&csize);CHKERRQ(ierr);
368   if (csize > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MKL_PARDISO parallel Schur complements not yet supported from PETSc\n");
369   ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr);
370   if (mpardiso->schur_size != size) {
371     mpardiso->schur_size = size;
372     ierr = PetscFree2(mpardiso->schur,mpardiso->schur_work);CHKERRQ(ierr);
373     ierr = PetscFree(mpardiso->schur_idxs);CHKERRQ(ierr);
374     ierr = PetscFree(mpardiso->schur_pivots);CHKERRQ(ierr);
375     ierr = PetscBLASIntCast(PetscMax(mpardiso->n,2*size),&mpardiso->schur_work_size);CHKERRQ(ierr);
376     ierr = PetscMalloc2(size*size,&mpardiso->schur,mpardiso->schur_work_size,&mpardiso->schur_work);CHKERRQ(ierr);
377     ierr = PetscMalloc1(size,&mpardiso->schur_idxs);CHKERRQ(ierr);
378   }
379   ierr = PetscMemzero(mpardiso->perm,mpardiso->n*sizeof(INT_TYPE));CHKERRQ(ierr);
380   ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr);
381   ierr = PetscMemcpy(mpardiso->schur_idxs,idxs,size*sizeof(PetscInt));CHKERRQ(ierr);
382   for (i=0;i<size;i++) mpardiso->perm[idxs[i]] = 1;
383   ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr);
384   if (size) { /* turn on Schur switch if we the set of indices is not empty */
385     mpardiso->iparm[36-1] = 2;
386   }
387   mpardiso->schur_factored = PETSC_FALSE;
388   mpardiso->schur_inverted = PETSC_FALSE;
389   PetscFunctionReturn(0);
390 }
391 
392 #undef __FUNCT__
393 #define __FUNCT__ "MatFactorCreateSchurComplement_MKL_PARDISO"
394 PetscErrorCode MatFactorCreateSchurComplement_MKL_PARDISO(Mat F,Mat* S)
395 {
396   Mat             St;
397   Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr;
398   PetscScalar     *array;
399   PetscErrorCode  ierr;
400 
401   PetscFunctionBegin;
402   if (!mpardiso->iparm[36-1]) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it");
403   else if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before");
404 
405   ierr = MatCreate(PetscObjectComm((PetscObject)F),&St);CHKERRQ(ierr);
406   ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mpardiso->schur_size,mpardiso->schur_size);CHKERRQ(ierr);
407   ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr);
408   ierr = MatSetUp(St);CHKERRQ(ierr);
409   ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr);
410   ierr = PetscMemcpy(array,mpardiso->schur,mpardiso->schur_size*mpardiso->schur_size*sizeof(PetscScalar));CHKERRQ(ierr);
411   ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr);
412   *S = St;
413   PetscFunctionReturn(0);
414 }
415 
416 #undef __FUNCT__
417 #define __FUNCT__ "MatFactorGetSchurComplement_MKL_PARDISO"
418 PetscErrorCode MatFactorGetSchurComplement_MKL_PARDISO(Mat F,Mat* S)
419 {
420   Mat             St;
421   Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr;
422   PetscErrorCode  ierr;
423 
424   PetscFunctionBegin;
425   if (!mpardiso->iparm[36-1]) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it");
426   else if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before");
427 
428   ierr = MatCreateSeqDense(PetscObjectComm((PetscObject)F),mpardiso->schur_size,mpardiso->schur_size,mpardiso->schur,&St);CHKERRQ(ierr);
429   *S = St;
430   PetscFunctionReturn(0);
431 }
432 
433 #undef __FUNCT__
434 #define __FUNCT__ "MatFactorInvertSchurComplement_MKL_PARDISO"
435 PetscErrorCode MatFactorInvertSchurComplement_MKL_PARDISO(Mat F)
436 {
437   Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr;
438   PetscErrorCode  ierr;
439 
440   PetscFunctionBegin;
441   if (!mpardiso->iparm[36-1]) { /* do nothing */
442     PetscFunctionReturn(0);
443   }
444   if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before");
445   ierr = MatMKLPardisoInvertSchur_Private(mpardiso);CHKERRQ(ierr);
446   PetscFunctionReturn(0);
447 }
448 
449 #undef __FUNCT__
450 #define __FUNCT__ "MatFactorSolveSchurComplement_MKL_PARDISO"
451 PetscErrorCode MatFactorSolveSchurComplement_MKL_PARDISO(Mat F, Vec rhs, Vec sol)
452 {
453   Mat_MKL_PARDISO   *mpardiso =(Mat_MKL_PARDISO*)F->spptr;
454   PetscScalar       *asol,*arhs;
455   PetscErrorCode ierr;
456 
457   PetscFunctionBegin;
458   if (!mpardiso->iparm[36-1]) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it");
459   else if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before");
460 
461   mpardiso->nrhs = 1;
462   ierr = VecGetArrayRead(rhs,(const PetscScalar**)&arhs);CHKERRQ(ierr);
463   ierr = VecGetArray(sol,&asol);CHKERRQ(ierr);
464   ierr = MatMKLPardisoSolveSchur_Private(mpardiso,arhs,asol);CHKERRQ(ierr);
465   ierr = VecRestoreArrayRead(rhs,(const PetscScalar**)&arhs);CHKERRQ(ierr);
466   ierr = VecRestoreArray(sol,&asol);CHKERRQ(ierr);
467   PetscFunctionReturn(0);
468 }
469 
470 #undef __FUNCT__
471 #define __FUNCT__ "MatFactorSolveSchurComplementTranspose_MKL_PARDISO"
472 PetscErrorCode MatFactorSolveSchurComplementTranspose_MKL_PARDISO(Mat F, Vec rhs, Vec sol)
473 {
474   Mat_MKL_PARDISO   *mpardiso =(Mat_MKL_PARDISO*)F->spptr;
475   PetscScalar       *asol,*arhs;
476   PetscErrorCode ierr;
477 
478   PetscFunctionBegin;
479   if (!mpardiso->iparm[36-1]) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it");
480   else if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before");
481 
482   mpardiso->nrhs = 1;
483   ierr = VecGetArrayRead(rhs,(const PetscScalar**)&arhs);CHKERRQ(ierr);
484   ierr = VecGetArray(sol,&asol);CHKERRQ(ierr);
485   mpardiso->iparm[12 - 1] = 2;
486   ierr = MatMKLPardisoSolveSchur_Private(mpardiso,arhs,asol);CHKERRQ(ierr);
487   mpardiso->iparm[12 - 1] = 0;
488   ierr = VecRestoreArrayRead(rhs,(const PetscScalar**)&arhs);CHKERRQ(ierr);
489   ierr = VecRestoreArray(sol,&asol);CHKERRQ(ierr);
490   PetscFunctionReturn(0);
491 }
492 
493 #undef __FUNCT__
494 #define __FUNCT__ "MatDestroy_MKL_PARDISO"
495 PetscErrorCode MatDestroy_MKL_PARDISO(Mat A)
496 {
497   Mat_MKL_PARDISO *mat_mkl_pardiso=(Mat_MKL_PARDISO*)A->spptr;
498   PetscBool       isSeqSBAIJ;
499   PetscErrorCode  ierr;
500 
501   PetscFunctionBegin;
502   if (mat_mkl_pardiso->CleanUp) {
503     mat_mkl_pardiso->phase = JOB_RELEASE_OF_ALL_MEMORY;
504 
505     MKL_PARDISO (mat_mkl_pardiso->pt,
506       &mat_mkl_pardiso->maxfct,
507       &mat_mkl_pardiso->mnum,
508       &mat_mkl_pardiso->mtype,
509       &mat_mkl_pardiso->phase,
510       &mat_mkl_pardiso->n,
511       NULL,
512       NULL,
513       NULL,
514       mat_mkl_pardiso->perm,
515       &mat_mkl_pardiso->nrhs,
516       mat_mkl_pardiso->iparm,
517       &mat_mkl_pardiso->msglvl,
518       NULL,
519       NULL,
520       &mat_mkl_pardiso->err);
521   }
522   ierr = PetscFree(mat_mkl_pardiso->perm);CHKERRQ(ierr);
523   ierr = PetscFree2(mat_mkl_pardiso->schur,mat_mkl_pardiso->schur_work);CHKERRQ(ierr);
524   ierr = PetscFree(mat_mkl_pardiso->schur_idxs);CHKERRQ(ierr);
525   ierr = PetscFree(mat_mkl_pardiso->schur_pivots);CHKERRQ(ierr);
526   if (mat_mkl_pardiso->freeaij) {
527     ierr = PetscFree2(mat_mkl_pardiso->ia,mat_mkl_pardiso->ja);CHKERRQ(ierr);
528     ierr = PetscFree(mat_mkl_pardiso->a);CHKERRQ(ierr);
529   }
530   if (mat_mkl_pardiso->Destroy) {
531     ierr = (mat_mkl_pardiso->Destroy)(A);CHKERRQ(ierr);
532   }
533   ierr = PetscFree(A->spptr);CHKERRQ(ierr);
534 
535   /* clear composed functions */
536   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverPackage_C",NULL);CHKERRQ(ierr);
537   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr);
538   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr);
539   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSchurComplement_C",NULL);CHKERRQ(ierr);
540   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorInvertSchurComplement_C",NULL);CHKERRQ(ierr);
541   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSolveSchurComplement_C",NULL);CHKERRQ(ierr);
542   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSolveSchurComplementTranspose_C",NULL);CHKERRQ(ierr);
543   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMkl_PardisoSetCntl_C",NULL);CHKERRQ(ierr);
544   PetscFunctionReturn(0);
545 }
546 
547 #undef __FUNCT__
548 #define __FUNCT__ "MatMKLPardisoScatterSchur_Private"
549 static PetscErrorCode MatMKLPardisoScatterSchur_Private(Mat_MKL_PARDISO *mpardiso, PetscScalar *whole, PetscScalar *schur, PetscBool reduce)
550 {
551   PetscFunctionBegin;
552   if (reduce) { /* data given for the whole matrix */
553     PetscInt i,m=0,p=0;
554     for (i=0;i<mpardiso->nrhs;i++) {
555       PetscInt j;
556       for (j=0;j<mpardiso->schur_size;j++) {
557         schur[p+j] = whole[m+mpardiso->schur_idxs[j]];
558       }
559       m += mpardiso->n;
560       p += mpardiso->schur_size;
561     }
562   } else { /* from Schur to whole */
563     PetscInt i,m=0,p=0;
564     for (i=0;i<mpardiso->nrhs;i++) {
565       PetscInt j;
566       for (j=0;j<mpardiso->schur_size;j++) {
567         whole[m+mpardiso->schur_idxs[j]] = schur[p+j];
568       }
569       m += mpardiso->n;
570       p += mpardiso->schur_size;
571     }
572   }
573   PetscFunctionReturn(0);
574 }
575 
576 #undef __FUNCT__
577 #define __FUNCT__ "MatSolve_MKL_PARDISO"
578 PetscErrorCode MatSolve_MKL_PARDISO(Mat A,Vec b,Vec x)
579 {
580   Mat_MKL_PARDISO   *mat_mkl_pardiso=(Mat_MKL_PARDISO*)(A)->spptr;
581   PetscErrorCode    ierr;
582   PetscScalar       *xarray;
583   const PetscScalar *barray;
584 
585   PetscFunctionBegin;
586   mat_mkl_pardiso->nrhs = 1;
587   ierr = VecGetArray(x,&xarray);CHKERRQ(ierr);
588   ierr = VecGetArrayRead(b,&barray);CHKERRQ(ierr);
589 
590   if (!mat_mkl_pardiso->schur) {
591     mat_mkl_pardiso->phase = JOB_SOLVE_ITERATIVE_REFINEMENT;
592   } else {
593     mat_mkl_pardiso->phase = JOB_SOLVE_FORWARD_SUBSTITUTION;
594   }
595   mat_mkl_pardiso->iparm[6-1] = 0;
596 
597   MKL_PARDISO (mat_mkl_pardiso->pt,
598     &mat_mkl_pardiso->maxfct,
599     &mat_mkl_pardiso->mnum,
600     &mat_mkl_pardiso->mtype,
601     &mat_mkl_pardiso->phase,
602     &mat_mkl_pardiso->n,
603     mat_mkl_pardiso->a,
604     mat_mkl_pardiso->ia,
605     mat_mkl_pardiso->ja,
606     mat_mkl_pardiso->perm,
607     &mat_mkl_pardiso->nrhs,
608     mat_mkl_pardiso->iparm,
609     &mat_mkl_pardiso->msglvl,
610     (void*)barray,
611     (void*)xarray,
612     &mat_mkl_pardiso->err);
613 
614   if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err);
615 
616   if (mat_mkl_pardiso->schur) { /* solve Schur complement and expand solution */
617     PetscInt shift = mat_mkl_pardiso->schur_size;
618 
619     /* if inverted, uses BLAS *MM subroutines, otherwise LAPACK *TRS */
620     if (!mat_mkl_pardiso->schur_inverted) {
621       shift = 0;
622     }
623 
624     if (!mat_mkl_pardiso->solve_interior) {
625       /* solve Schur complement */
626       ierr = MatMKLPardisoScatterSchur_Private(mat_mkl_pardiso,xarray,mat_mkl_pardiso->schur_work,PETSC_TRUE);CHKERRQ(ierr);
627       ierr = MatMKLPardisoSolveSchur_Private(mat_mkl_pardiso,mat_mkl_pardiso->schur_work,mat_mkl_pardiso->schur_work+shift);CHKERRQ(ierr);
628       ierr = MatMKLPardisoScatterSchur_Private(mat_mkl_pardiso,xarray,mat_mkl_pardiso->schur_work+shift,PETSC_FALSE);CHKERRQ(ierr);
629     } else { /* if we are solving for the interior problem, any value in barray[schur] forward-substitued to xarray[schur] will be neglected */
630       PetscInt i;
631       for (i=0;i<mat_mkl_pardiso->schur_size;i++) {
632         xarray[mat_mkl_pardiso->schur_idxs[i]] = 0.;
633       }
634     }
635     /* expansion phase */
636     mat_mkl_pardiso->iparm[6-1] = 1;
637     mat_mkl_pardiso->phase = JOB_SOLVE_BACKWARD_SUBSTITUTION;
638     MKL_PARDISO (mat_mkl_pardiso->pt,
639       &mat_mkl_pardiso->maxfct,
640       &mat_mkl_pardiso->mnum,
641       &mat_mkl_pardiso->mtype,
642       &mat_mkl_pardiso->phase,
643       &mat_mkl_pardiso->n,
644       mat_mkl_pardiso->a,
645       mat_mkl_pardiso->ia,
646       mat_mkl_pardiso->ja,
647       mat_mkl_pardiso->perm,
648       &mat_mkl_pardiso->nrhs,
649       mat_mkl_pardiso->iparm,
650       &mat_mkl_pardiso->msglvl,
651       (void*)xarray,
652       (void*)mat_mkl_pardiso->schur_work, /* according to the specs, the solution vector is always used */
653       &mat_mkl_pardiso->err);
654 
655     if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err);
656     mat_mkl_pardiso->iparm[6-1] = 0;
657   }
658   ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr);
659   ierr = VecRestoreArrayRead(b,&barray);CHKERRQ(ierr);
660   mat_mkl_pardiso->CleanUp = PETSC_TRUE;
661   PetscFunctionReturn(0);
662 }
663 
664 #undef __FUNCT__
665 #define __FUNCT__ "MatSolveTranspose_MKL_PARDISO"
666 PetscErrorCode MatSolveTranspose_MKL_PARDISO(Mat A,Vec b,Vec x)
667 {
668   Mat_MKL_PARDISO *mat_mkl_pardiso=(Mat_MKL_PARDISO*)A->spptr;
669   PetscErrorCode  ierr;
670 
671   PetscFunctionBegin;
672 #if defined(PETSC_USE_COMPLEX)
673   mat_mkl_pardiso->iparm[12 - 1] = 1;
674 #else
675   mat_mkl_pardiso->iparm[12 - 1] = 2;
676 #endif
677   ierr = MatSolve_MKL_PARDISO(A,b,x);CHKERRQ(ierr);
678   mat_mkl_pardiso->iparm[12 - 1] = 0;
679   PetscFunctionReturn(0);
680 }
681 
682 #undef __FUNCT__
683 #define __FUNCT__ "MatMatSolve_MKL_PARDISO"
684 PetscErrorCode MatMatSolve_MKL_PARDISO(Mat A,Mat B,Mat X)
685 {
686   Mat_MKL_PARDISO   *mat_mkl_pardiso=(Mat_MKL_PARDISO*)(A)->spptr;
687   PetscErrorCode    ierr;
688   PetscScalar       *barray, *xarray;
689   PetscBool         flg;
690 
691   PetscFunctionBegin;
692   ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQDENSE,&flg);CHKERRQ(ierr);
693   if (!flg) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONG,"Matrix B must be MATSEQDENSE matrix");
694   ierr = PetscObjectTypeCompare((PetscObject)X,MATSEQDENSE,&flg);CHKERRQ(ierr);
695   if (!flg) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONG,"Matrix X must be MATSEQDENSE matrix");
696 
697   ierr = MatGetSize(B,NULL,(PetscInt*)&mat_mkl_pardiso->nrhs);CHKERRQ(ierr);
698 
699   if(mat_mkl_pardiso->nrhs > 0){
700     ierr = MatDenseGetArray(B,&barray);
701     ierr = MatDenseGetArray(X,&xarray);
702 
703     if (!mat_mkl_pardiso->schur) {
704       mat_mkl_pardiso->phase = JOB_SOLVE_ITERATIVE_REFINEMENT;
705     } else {
706       mat_mkl_pardiso->phase = JOB_SOLVE_FORWARD_SUBSTITUTION;
707     }
708     mat_mkl_pardiso->iparm[6-1] = 0;
709 
710     MKL_PARDISO (mat_mkl_pardiso->pt,
711       &mat_mkl_pardiso->maxfct,
712       &mat_mkl_pardiso->mnum,
713       &mat_mkl_pardiso->mtype,
714       &mat_mkl_pardiso->phase,
715       &mat_mkl_pardiso->n,
716       mat_mkl_pardiso->a,
717       mat_mkl_pardiso->ia,
718       mat_mkl_pardiso->ja,
719       mat_mkl_pardiso->perm,
720       &mat_mkl_pardiso->nrhs,
721       mat_mkl_pardiso->iparm,
722       &mat_mkl_pardiso->msglvl,
723       (void*)barray,
724       (void*)xarray,
725       &mat_mkl_pardiso->err);
726     if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err);
727 
728     if (mat_mkl_pardiso->schur) { /* solve Schur complement and expand solution */
729       PetscScalar *o_schur_work = NULL;
730       PetscInt    shift = mat_mkl_pardiso->schur_size*mat_mkl_pardiso->nrhs,scale;
731       PetscInt    mem = mat_mkl_pardiso->n*mat_mkl_pardiso->nrhs;
732 
733       /* allocate extra memory if it is needed */
734       scale = 1;
735       if (mat_mkl_pardiso->schur_inverted) {
736         scale = 2;
737       }
738       mem *= scale;
739       if (mem > mat_mkl_pardiso->schur_work_size) {
740         o_schur_work = mat_mkl_pardiso->schur_work;
741         ierr = PetscMalloc1(mem,&mat_mkl_pardiso->schur_work);CHKERRQ(ierr);
742       }
743 
744       /* if inverted, uses BLAS *MM subroutines, otherwise LAPACK *TRS */
745       if (!mat_mkl_pardiso->schur_inverted) {
746         shift = 0;
747       }
748 
749       /* solve Schur complement */
750       if (!mat_mkl_pardiso->solve_interior) {
751         ierr = MatMKLPardisoScatterSchur_Private(mat_mkl_pardiso,xarray,mat_mkl_pardiso->schur_work,PETSC_TRUE);CHKERRQ(ierr);
752         ierr = MatMKLPardisoSolveSchur_Private(mat_mkl_pardiso,mat_mkl_pardiso->schur_work,mat_mkl_pardiso->schur_work+shift);CHKERRQ(ierr);
753         ierr = MatMKLPardisoScatterSchur_Private(mat_mkl_pardiso,xarray,mat_mkl_pardiso->schur_work+shift,PETSC_FALSE);CHKERRQ(ierr);
754       } else { /* if we are solving for the interior problem, any value in barray[schur,n] forward-substitued to xarray[schur,n] will be neglected */
755         PetscInt i,n,m=0;
756         for (n=0;n<mat_mkl_pardiso->nrhs;n++) {
757           for (i=0;i<mat_mkl_pardiso->schur_size;i++) {
758             xarray[mat_mkl_pardiso->schur_idxs[i]+m] = 0.;
759           }
760           m += mat_mkl_pardiso->n;
761         }
762       }
763       /* expansion phase */
764       mat_mkl_pardiso->iparm[6-1] = 1;
765       mat_mkl_pardiso->phase = JOB_SOLVE_BACKWARD_SUBSTITUTION;
766       MKL_PARDISO (mat_mkl_pardiso->pt,
767         &mat_mkl_pardiso->maxfct,
768         &mat_mkl_pardiso->mnum,
769         &mat_mkl_pardiso->mtype,
770         &mat_mkl_pardiso->phase,
771         &mat_mkl_pardiso->n,
772         mat_mkl_pardiso->a,
773         mat_mkl_pardiso->ia,
774         mat_mkl_pardiso->ja,
775         mat_mkl_pardiso->perm,
776         &mat_mkl_pardiso->nrhs,
777         mat_mkl_pardiso->iparm,
778         &mat_mkl_pardiso->msglvl,
779         (void*)xarray,
780         (void*)mat_mkl_pardiso->schur_work, /* according to the specs, the solution vector is always used */
781         &mat_mkl_pardiso->err);
782       if (o_schur_work) { /* restore original schur_work (minimal size) */
783         ierr = PetscFree(mat_mkl_pardiso->schur_work);CHKERRQ(ierr);
784         mat_mkl_pardiso->schur_work = o_schur_work;
785       }
786       if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err);
787       mat_mkl_pardiso->iparm[6-1] = 0;
788     }
789   }
790   mat_mkl_pardiso->CleanUp = PETSC_TRUE;
791   PetscFunctionReturn(0);
792 }
793 
794 #undef __FUNCT__
795 #define __FUNCT__ "MatFactorNumeric_MKL_PARDISO"
796 PetscErrorCode MatFactorNumeric_MKL_PARDISO(Mat F,Mat A,const MatFactorInfo *info)
797 {
798   Mat_MKL_PARDISO *mat_mkl_pardiso=(Mat_MKL_PARDISO*)(F)->spptr;
799   PetscErrorCode  ierr;
800 
801   PetscFunctionBegin;
802   mat_mkl_pardiso->matstruc = SAME_NONZERO_PATTERN;
803   ierr = (*mat_mkl_pardiso->Convert)(A,mat_mkl_pardiso->needsym,MAT_REUSE_MATRIX,&mat_mkl_pardiso->freeaij,&mat_mkl_pardiso->nz,&mat_mkl_pardiso->ia,&mat_mkl_pardiso->ja,&mat_mkl_pardiso->a);CHKERRQ(ierr);
804 
805   mat_mkl_pardiso->phase = JOB_NUMERICAL_FACTORIZATION;
806   MKL_PARDISO (mat_mkl_pardiso->pt,
807     &mat_mkl_pardiso->maxfct,
808     &mat_mkl_pardiso->mnum,
809     &mat_mkl_pardiso->mtype,
810     &mat_mkl_pardiso->phase,
811     &mat_mkl_pardiso->n,
812     mat_mkl_pardiso->a,
813     mat_mkl_pardiso->ia,
814     mat_mkl_pardiso->ja,
815     mat_mkl_pardiso->perm,
816     &mat_mkl_pardiso->nrhs,
817     mat_mkl_pardiso->iparm,
818     &mat_mkl_pardiso->msglvl,
819     NULL,
820     (void*)mat_mkl_pardiso->schur,
821     &mat_mkl_pardiso->err);
822   if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err);
823 
824   if (mat_mkl_pardiso->schur) { /* schur output from pardiso is in row major format */
825     PetscInt j,k,n=mat_mkl_pardiso->schur_size;
826     if (!mat_mkl_pardiso->schur_solver_type) {
827       for (j=0; j<n; j++) {
828         for (k=0; k<j; k++) {
829           PetscScalar tmp = mat_mkl_pardiso->schur[j + k*n];
830           mat_mkl_pardiso->schur[j + k*n] = mat_mkl_pardiso->schur[k + j*n];
831           mat_mkl_pardiso->schur[k + j*n] = tmp;
832         }
833       }
834     } else { /* we could use row-major in LAPACK routines (e.g. use 'U' instead of 'L'; instead, I prefer consistency between data structures and swap to column major */
835       for (j=0; j<n; j++) {
836         for (k=0; k<j; k++) {
837           mat_mkl_pardiso->schur[j + k*n] = mat_mkl_pardiso->schur[k + j*n];
838         }
839       }
840     }
841   }
842   mat_mkl_pardiso->matstruc = SAME_NONZERO_PATTERN;
843   mat_mkl_pardiso->CleanUp  = PETSC_TRUE;
844   mat_mkl_pardiso->schur_factored = PETSC_FALSE;
845   mat_mkl_pardiso->schur_inverted = PETSC_FALSE;
846   mat_mkl_pardiso->schur_solver_type = 0;
847   PetscFunctionReturn(0);
848 }
849 
850 #undef __FUNCT__
851 #define __FUNCT__ "PetscSetMKL_PARDISOFromOptions"
852 PetscErrorCode PetscSetMKL_PARDISOFromOptions(Mat F, Mat A)
853 {
854   Mat_MKL_PARDISO     *mat_mkl_pardiso = (Mat_MKL_PARDISO*)F->spptr;
855   PetscErrorCode      ierr;
856   PetscInt            icntl, threads = 1;
857   PetscBool           flg;
858 
859   PetscFunctionBegin;
860   ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MKL_PARDISO Options","Mat");CHKERRQ(ierr);
861   ierr = PetscOptionsInt("-mat_mkl_pardiso_65","Number of threads to use","None",threads,&threads,&flg);CHKERRQ(ierr);
862   if (flg) mkl_set_num_threads((int)threads);
863 
864   ierr = PetscOptionsInt("-mat_mkl_pardiso_66","Maximum number of factors with identical sparsity structure that must be kept in memory at the same time","None",mat_mkl_pardiso->maxfct,&icntl,&flg);CHKERRQ(ierr);
865   if (flg) mat_mkl_pardiso->maxfct = icntl;
866 
867   ierr = PetscOptionsInt("-mat_mkl_pardiso_67","Indicates the actual matrix for the solution phase","None",mat_mkl_pardiso->mnum,&icntl,&flg);CHKERRQ(ierr);
868   if (flg) mat_mkl_pardiso->mnum = icntl;
869 
870   ierr = PetscOptionsInt("-mat_mkl_pardiso_68","Message level information","None",mat_mkl_pardiso->msglvl,&icntl,&flg);CHKERRQ(ierr);
871   if (flg) mat_mkl_pardiso->msglvl = icntl;
872 
873   ierr = PetscOptionsInt("-mat_mkl_pardiso_69","Defines the matrix type","None",mat_mkl_pardiso->mtype,&icntl,&flg);CHKERRQ(ierr);
874   if(flg){
875     void *pt[IPARM_SIZE];
876     mat_mkl_pardiso->mtype = icntl;
877     MKL_PARDISO_INIT(pt, &mat_mkl_pardiso->mtype, mat_mkl_pardiso->iparm);
878 #if defined(PETSC_USE_REAL_SINGLE)
879     mat_mkl_pardiso->iparm[27] = 1;
880 #else
881     mat_mkl_pardiso->iparm[27] = 0;
882 #endif
883     mat_mkl_pardiso->iparm[34] = 1;
884   }
885   ierr = PetscOptionsInt("-mat_mkl_pardiso_1","Use default values","None",mat_mkl_pardiso->iparm[0],&icntl,&flg);CHKERRQ(ierr);
886 
887   if(flg && icntl != 0){
888     ierr = PetscOptionsInt("-mat_mkl_pardiso_2","Fill-in reducing ordering for the input matrix","None",mat_mkl_pardiso->iparm[1],&icntl,&flg);CHKERRQ(ierr);
889     if (flg) mat_mkl_pardiso->iparm[1] = icntl;
890 
891     ierr = PetscOptionsInt("-mat_mkl_pardiso_4","Preconditioned CGS/CG","None",mat_mkl_pardiso->iparm[3],&icntl,&flg);CHKERRQ(ierr);
892     if (flg) mat_mkl_pardiso->iparm[3] = icntl;
893 
894     ierr = PetscOptionsInt("-mat_mkl_pardiso_5","User permutation","None",mat_mkl_pardiso->iparm[4],&icntl,&flg);CHKERRQ(ierr);
895     if (flg) mat_mkl_pardiso->iparm[4] = icntl;
896 
897     ierr = PetscOptionsInt("-mat_mkl_pardiso_6","Write solution on x","None",mat_mkl_pardiso->iparm[5],&icntl,&flg);CHKERRQ(ierr);
898     if (flg) mat_mkl_pardiso->iparm[5] = icntl;
899 
900     ierr = PetscOptionsInt("-mat_mkl_pardiso_8","Iterative refinement step","None",mat_mkl_pardiso->iparm[7],&icntl,&flg);CHKERRQ(ierr);
901     if (flg) mat_mkl_pardiso->iparm[7] = icntl;
902 
903     ierr = PetscOptionsInt("-mat_mkl_pardiso_10","Pivoting perturbation","None",mat_mkl_pardiso->iparm[9],&icntl,&flg);CHKERRQ(ierr);
904     if (flg) mat_mkl_pardiso->iparm[9] = icntl;
905 
906     ierr = PetscOptionsInt("-mat_mkl_pardiso_11","Scaling vectors","None",mat_mkl_pardiso->iparm[10],&icntl,&flg);CHKERRQ(ierr);
907     if (flg) mat_mkl_pardiso->iparm[10] = icntl;
908 
909     ierr = PetscOptionsInt("-mat_mkl_pardiso_12","Solve with transposed or conjugate transposed matrix A","None",mat_mkl_pardiso->iparm[11],&icntl,&flg);CHKERRQ(ierr);
910     if (flg) mat_mkl_pardiso->iparm[11] = icntl;
911 
912     ierr = PetscOptionsInt("-mat_mkl_pardiso_13","Improved accuracy using (non-) symmetric weighted matching","None",mat_mkl_pardiso->iparm[12],&icntl,&flg);CHKERRQ(ierr);
913     if (flg) mat_mkl_pardiso->iparm[12] = icntl;
914 
915     ierr = PetscOptionsInt("-mat_mkl_pardiso_18","Numbers of non-zero elements","None",mat_mkl_pardiso->iparm[17],&icntl,&flg);CHKERRQ(ierr);
916     if (flg) mat_mkl_pardiso->iparm[17] = icntl;
917 
918     ierr = PetscOptionsInt("-mat_mkl_pardiso_19","Report number of floating point operations","None",mat_mkl_pardiso->iparm[18],&icntl,&flg);CHKERRQ(ierr);
919     if (flg) mat_mkl_pardiso->iparm[18] = icntl;
920 
921     ierr = PetscOptionsInt("-mat_mkl_pardiso_21","Pivoting for symmetric indefinite matrices","None",mat_mkl_pardiso->iparm[20],&icntl,&flg);CHKERRQ(ierr);
922     if (flg) mat_mkl_pardiso->iparm[20] = icntl;
923 
924     ierr = PetscOptionsInt("-mat_mkl_pardiso_24","Parallel factorization control","None",mat_mkl_pardiso->iparm[23],&icntl,&flg);CHKERRQ(ierr);
925     if (flg) mat_mkl_pardiso->iparm[23] = icntl;
926 
927     ierr = PetscOptionsInt("-mat_mkl_pardiso_25","Parallel forward/backward solve control","None",mat_mkl_pardiso->iparm[24],&icntl,&flg);CHKERRQ(ierr);
928     if (flg) mat_mkl_pardiso->iparm[24] = icntl;
929 
930     ierr = PetscOptionsInt("-mat_mkl_pardiso_27","Matrix checker","None",mat_mkl_pardiso->iparm[26],&icntl,&flg);CHKERRQ(ierr);
931     if (flg) mat_mkl_pardiso->iparm[26] = icntl;
932 
933     ierr = PetscOptionsInt("-mat_mkl_pardiso_31","Partial solve and computing selected components of the solution vectors","None",mat_mkl_pardiso->iparm[30],&icntl,&flg);CHKERRQ(ierr);
934     if (flg) mat_mkl_pardiso->iparm[30] = icntl;
935 
936     ierr = PetscOptionsInt("-mat_mkl_pardiso_34","Optimal number of threads for conditional numerical reproducibility (CNR) mode","None",mat_mkl_pardiso->iparm[33],&icntl,&flg);CHKERRQ(ierr);
937     if (flg) mat_mkl_pardiso->iparm[33] = icntl;
938 
939     ierr = PetscOptionsInt("-mat_mkl_pardiso_60","Intel MKL_PARDISO mode","None",mat_mkl_pardiso->iparm[59],&icntl,&flg);CHKERRQ(ierr);
940     if (flg) mat_mkl_pardiso->iparm[59] = icntl;
941   }
942   PetscOptionsEnd();
943   PetscFunctionReturn(0);
944 }
945 
946 #undef __FUNCT__
947 #define __FUNCT__ "MatFactorMKL_PARDISOInitialize_Private"
948 PetscErrorCode MatFactorMKL_PARDISOInitialize_Private(Mat A, MatFactorType ftype, Mat_MKL_PARDISO *mat_mkl_pardiso)
949 {
950   PetscErrorCode ierr;
951   PetscInt       i;
952 
953   PetscFunctionBegin;
954   for ( i = 0; i < IPARM_SIZE; i++ ){
955     mat_mkl_pardiso->iparm[i] = 0;
956   }
957   for ( i = 0; i < IPARM_SIZE; i++ ){
958     mat_mkl_pardiso->pt[i] = 0;
959   }
960   /* Default options for both sym and unsym */
961   mat_mkl_pardiso->iparm[ 0] =  1; /* Solver default parameters overriden with provided by iparm */
962   mat_mkl_pardiso->iparm[ 1] =  2; /* Metis reordering */
963   mat_mkl_pardiso->iparm[ 5] =  0; /* Write solution into x */
964   mat_mkl_pardiso->iparm[ 7] =  0; /* Max number of iterative refinement steps */
965   mat_mkl_pardiso->iparm[17] = -1; /* Output: Number of nonzeros in the factor LU */
966   mat_mkl_pardiso->iparm[18] = -1; /* Output: Mflops for LU factorization */
967 #if 0
968   mat_mkl_pardiso->iparm[23] =  1; /* Parallel factorization control*/
969 #endif
970   mat_mkl_pardiso->iparm[34] =  1; /* Cluster Sparse Solver use C-style indexing for ia and ja arrays */
971   mat_mkl_pardiso->iparm[39] =  0; /* Input: matrix/rhs/solution stored on master */
972 
973   mat_mkl_pardiso->CleanUp   = PETSC_FALSE;
974   mat_mkl_pardiso->maxfct    = 1; /* Maximum number of numerical factorizations. */
975   mat_mkl_pardiso->mnum      = 1; /* Which factorization to use. */
976   mat_mkl_pardiso->msglvl    = 0; /* 0: do not print 1: Print statistical information in file */
977   mat_mkl_pardiso->phase     = -1;
978   mat_mkl_pardiso->err       = 0;
979 
980   mat_mkl_pardiso->n         = A->rmap->N;
981   mat_mkl_pardiso->nrhs      = 1;
982   mat_mkl_pardiso->err       = 0;
983   mat_mkl_pardiso->phase     = -1;
984 
985   if(ftype == MAT_FACTOR_LU){
986     mat_mkl_pardiso->iparm[ 9] = 13; /* Perturb the pivot elements with 1E-13 */
987     mat_mkl_pardiso->iparm[10] =  1; /* Use nonsymmetric permutation and scaling MPS */
988     mat_mkl_pardiso->iparm[12] =  1; /* Switch on Maximum Weighted Matching algorithm (default for non-symmetric) */
989 
990   } else {
991     mat_mkl_pardiso->iparm[ 9] = 13; /* Perturb the pivot elements with 1E-13 */
992     mat_mkl_pardiso->iparm[10] = 0; /* Use nonsymmetric permutation and scaling MPS */
993     mat_mkl_pardiso->iparm[12] = 1; /* Switch on Maximum Weighted Matching algorithm (default for non-symmetric) */
994 /*    mat_mkl_pardiso->iparm[20] =  1; */ /* Apply 1x1 and 2x2 Bunch-Kaufman pivoting during the factorization process */
995 #if defined(PETSC_USE_DEBUG)
996     mat_mkl_pardiso->iparm[26] = 1; /* Matrix checker */
997 #endif
998   }
999   ierr = PetscMalloc1(A->rmap->N*sizeof(INT_TYPE), &mat_mkl_pardiso->perm);CHKERRQ(ierr);
1000   for(i = 0; i < A->rmap->N; i++){
1001     mat_mkl_pardiso->perm[i] = 0;
1002   }
1003   mat_mkl_pardiso->schur_size = 0;
1004   PetscFunctionReturn(0);
1005 }
1006 
1007 #undef __FUNCT__
1008 #define __FUNCT__ "MatFactorSymbolic_AIJMKL_PARDISO_Private"
1009 PetscErrorCode MatFactorSymbolic_AIJMKL_PARDISO_Private(Mat F,Mat A,const MatFactorInfo *info)
1010 {
1011   Mat_MKL_PARDISO *mat_mkl_pardiso = (Mat_MKL_PARDISO*)F->spptr;
1012   PetscErrorCode  ierr;
1013 
1014   PetscFunctionBegin;
1015   mat_mkl_pardiso->matstruc = DIFFERENT_NONZERO_PATTERN;
1016   ierr = PetscSetMKL_PARDISOFromOptions(F,A);CHKERRQ(ierr);
1017 
1018   /* throw away any previously computed structure */
1019   if (mat_mkl_pardiso->freeaij) {
1020     ierr = PetscFree2(mat_mkl_pardiso->ia,mat_mkl_pardiso->ja);CHKERRQ(ierr);
1021     ierr = PetscFree(mat_mkl_pardiso->a);CHKERRQ(ierr);
1022   }
1023   ierr = (*mat_mkl_pardiso->Convert)(A,mat_mkl_pardiso->needsym,MAT_INITIAL_MATRIX,&mat_mkl_pardiso->freeaij,&mat_mkl_pardiso->nz,&mat_mkl_pardiso->ia,&mat_mkl_pardiso->ja,&mat_mkl_pardiso->a);CHKERRQ(ierr);
1024   mat_mkl_pardiso->n = A->rmap->N;
1025 
1026   mat_mkl_pardiso->phase = JOB_ANALYSIS;
1027 
1028   MKL_PARDISO (mat_mkl_pardiso->pt,
1029     &mat_mkl_pardiso->maxfct,
1030     &mat_mkl_pardiso->mnum,
1031     &mat_mkl_pardiso->mtype,
1032     &mat_mkl_pardiso->phase,
1033     &mat_mkl_pardiso->n,
1034     mat_mkl_pardiso->a,
1035     mat_mkl_pardiso->ia,
1036     mat_mkl_pardiso->ja,
1037     mat_mkl_pardiso->perm,
1038     &mat_mkl_pardiso->nrhs,
1039     mat_mkl_pardiso->iparm,
1040     &mat_mkl_pardiso->msglvl,
1041     NULL,
1042     NULL,
1043     &mat_mkl_pardiso->err);
1044   if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d\n. Please check manual",mat_mkl_pardiso->err);
1045 
1046   mat_mkl_pardiso->CleanUp = PETSC_TRUE;
1047 
1048   if (F->factortype == MAT_FACTOR_LU) {
1049     F->ops->lufactornumeric = MatFactorNumeric_MKL_PARDISO;
1050   } else {
1051     F->ops->choleskyfactornumeric = MatFactorNumeric_MKL_PARDISO;
1052   }
1053   F->ops->solve           = MatSolve_MKL_PARDISO;
1054   F->ops->solvetranspose  = MatSolveTranspose_MKL_PARDISO;
1055   F->ops->matsolve        = MatMatSolve_MKL_PARDISO;
1056   PetscFunctionReturn(0);
1057 }
1058 
1059 #undef __FUNCT__
1060 #define __FUNCT__ "MatLUFactorSymbolic_AIJMKL_PARDISO"
1061 PetscErrorCode MatLUFactorSymbolic_AIJMKL_PARDISO(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info)
1062 {
1063   PetscErrorCode ierr;
1064 
1065   PetscFunctionBegin;
1066   ierr = MatFactorSymbolic_AIJMKL_PARDISO_Private(F, A, info);CHKERRQ(ierr);
1067   PetscFunctionReturn(0);
1068 }
1069 
1070 #undef __FUNCT__
1071 #define __FUNCT__ "MatCholeskyFactorSymbolic_AIJMKL_PARDISO"
1072 PetscErrorCode MatCholeskyFactorSymbolic_AIJMKL_PARDISO(Mat F,Mat A,IS r,const MatFactorInfo *info)
1073 {
1074   PetscErrorCode ierr;
1075 
1076   PetscFunctionBegin;
1077   ierr = MatFactorSymbolic_AIJMKL_PARDISO_Private(F, A, info);CHKERRQ(ierr);
1078   PetscFunctionReturn(0);
1079 }
1080 
1081 #undef __FUNCT__
1082 #define __FUNCT__ "MatView_MKL_PARDISO"
1083 PetscErrorCode MatView_MKL_PARDISO(Mat A, PetscViewer viewer)
1084 {
1085   PetscErrorCode    ierr;
1086   PetscBool         iascii;
1087   PetscViewerFormat format;
1088   Mat_MKL_PARDISO   *mat_mkl_pardiso=(Mat_MKL_PARDISO*)A->spptr;
1089   PetscInt          i;
1090 
1091   PetscFunctionBegin;
1092   if (A->ops->solve != MatSolve_MKL_PARDISO) PetscFunctionReturn(0);
1093 
1094   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
1095   if (iascii) {
1096     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
1097     if (format == PETSC_VIEWER_ASCII_INFO) {
1098       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO run parameters:\n");CHKERRQ(ierr);
1099       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO phase:             %d \n",mat_mkl_pardiso->phase);CHKERRQ(ierr);
1100       for(i = 1; i <= 64; i++){
1101         ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO iparm[%d]:     %d \n",i, mat_mkl_pardiso->iparm[i - 1]);CHKERRQ(ierr);
1102       }
1103       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO maxfct:     %d \n", mat_mkl_pardiso->maxfct);CHKERRQ(ierr);
1104       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO mnum:     %d \n", mat_mkl_pardiso->mnum);CHKERRQ(ierr);
1105       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO mtype:     %d \n", mat_mkl_pardiso->mtype);CHKERRQ(ierr);
1106       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO n:     %d \n", mat_mkl_pardiso->n);CHKERRQ(ierr);
1107       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO nrhs:     %d \n", mat_mkl_pardiso->nrhs);CHKERRQ(ierr);
1108       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO msglvl:     %d \n", mat_mkl_pardiso->msglvl);CHKERRQ(ierr);
1109     }
1110   }
1111   PetscFunctionReturn(0);
1112 }
1113 
1114 
1115 #undef __FUNCT__
1116 #define __FUNCT__ "MatGetInfo_MKL_PARDISO"
1117 PetscErrorCode MatGetInfo_MKL_PARDISO(Mat A, MatInfoType flag, MatInfo *info)
1118 {
1119   Mat_MKL_PARDISO *mat_mkl_pardiso =(Mat_MKL_PARDISO*)A->spptr;
1120 
1121   PetscFunctionBegin;
1122   info->block_size        = 1.0;
1123   info->nz_allocated      = mat_mkl_pardiso->nz + 0.0;
1124   info->nz_unneeded       = 0.0;
1125   info->assemblies        = 0.0;
1126   info->mallocs           = 0.0;
1127   info->memory            = 0.0;
1128   info->fill_ratio_given  = 0;
1129   info->fill_ratio_needed = 0;
1130   info->factor_mallocs    = 0;
1131   PetscFunctionReturn(0);
1132 }
1133 
1134 #undef __FUNCT__
1135 #define __FUNCT__ "MatMkl_PardisoSetCntl_MKL_PARDISO"
1136 PetscErrorCode MatMkl_PardisoSetCntl_MKL_PARDISO(Mat F,PetscInt icntl,PetscInt ival)
1137 {
1138   Mat_MKL_PARDISO *mat_mkl_pardiso =(Mat_MKL_PARDISO*)F->spptr;
1139 
1140   PetscFunctionBegin;
1141   if(icntl <= 64){
1142     mat_mkl_pardiso->iparm[icntl - 1] = ival;
1143   } else {
1144     if(icntl == 65)
1145       mkl_set_num_threads((int)ival);
1146     else if(icntl == 66)
1147       mat_mkl_pardiso->maxfct = ival;
1148     else if(icntl == 67)
1149       mat_mkl_pardiso->mnum = ival;
1150     else if(icntl == 68)
1151       mat_mkl_pardiso->msglvl = ival;
1152     else if(icntl == 69){
1153       void *pt[IPARM_SIZE];
1154       mat_mkl_pardiso->mtype = ival;
1155       MKL_PARDISO_INIT(pt, &mat_mkl_pardiso->mtype, mat_mkl_pardiso->iparm);
1156 #if defined(PETSC_USE_REAL_SINGLE)
1157       mat_mkl_pardiso->iparm[27] = 1;
1158 #else
1159       mat_mkl_pardiso->iparm[27] = 0;
1160 #endif
1161       mat_mkl_pardiso->iparm[34] = 1;
1162     } else if(icntl==70) {
1163       mat_mkl_pardiso->solve_interior = !!ival;
1164     }
1165   }
1166   PetscFunctionReturn(0);
1167 }
1168 
1169 #undef __FUNCT__
1170 #define __FUNCT__ "MatMkl_PardisoSetCntl"
1171 /*@
1172   MatMkl_PardisoSetCntl - Set Mkl_Pardiso parameters
1173 
1174    Logically Collective on Mat
1175 
1176    Input Parameters:
1177 +  F - the factored matrix obtained by calling MatGetFactor()
1178 .  icntl - index of Mkl_Pardiso parameter
1179 -  ival - value of Mkl_Pardiso parameter
1180 
1181   Options Database:
1182 .   -mat_mkl_pardiso_<icntl> <ival>
1183 
1184    Level: beginner
1185 
1186    References: Mkl_Pardiso Users' Guide
1187 
1188 .seealso: MatGetFactor()
1189 @*/
1190 PetscErrorCode MatMkl_PardisoSetCntl(Mat F,PetscInt icntl,PetscInt ival)
1191 {
1192   PetscErrorCode ierr;
1193 
1194   PetscFunctionBegin;
1195   ierr = PetscTryMethod(F,"MatMkl_PardisoSetCntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr);
1196   PetscFunctionReturn(0);
1197 }
1198 
1199 /*MC
1200   MATSOLVERMKL_PARDISO -  A matrix type providing direct solvers (LU) for
1201   sequential matrices via the external package MKL_PARDISO.
1202 
1203   Works with MATSEQAIJ matrices
1204 
1205   Use -pc_type lu -pc_factor_mat_solver_package mkl_pardiso to us this direct solver
1206 
1207   Options Database Keys:
1208 + -mat_mkl_pardiso_65 - Number of threads to use
1209 . -mat_mkl_pardiso_66 - Maximum number of factors with identical sparsity structure that must be kept in memory at the same time
1210 . -mat_mkl_pardiso_67 - Indicates the actual matrix for the solution phase
1211 . -mat_mkl_pardiso_68 - Message level information
1212 . -mat_mkl_pardiso_69 - Defines the matrix type. IMPORTANT: When you set this flag, iparm parameters are going to be set to the default ones for the matrix type
1213 . -mat_mkl_pardiso_1 - Use default values
1214 . -mat_mkl_pardiso_2 - Fill-in reducing ordering for the input matrix
1215 . -mat_mkl_pardiso_4 - Preconditioned CGS/CG
1216 . -mat_mkl_pardiso_5 - User permutation
1217 . -mat_mkl_pardiso_6 - Write solution on x
1218 . -mat_mkl_pardiso_8 - Iterative refinement step
1219 . -mat_mkl_pardiso_10 - Pivoting perturbation
1220 . -mat_mkl_pardiso_11 - Scaling vectors
1221 . -mat_mkl_pardiso_12 - Solve with transposed or conjugate transposed matrix A
1222 . -mat_mkl_pardiso_13 - Improved accuracy using (non-) symmetric weighted matching
1223 . -mat_mkl_pardiso_18 - Numbers of non-zero elements
1224 . -mat_mkl_pardiso_19 - Report number of floating point operations
1225 . -mat_mkl_pardiso_21 - Pivoting for symmetric indefinite matrices
1226 . -mat_mkl_pardiso_24 - Parallel factorization control
1227 . -mat_mkl_pardiso_25 - Parallel forward/backward solve control
1228 . -mat_mkl_pardiso_27 - Matrix checker
1229 . -mat_mkl_pardiso_31 - Partial solve and computing selected components of the solution vectors
1230 . -mat_mkl_pardiso_34 - Optimal number of threads for conditional numerical reproducibility (CNR) mode
1231 - -mat_mkl_pardiso_60 - Intel MKL_PARDISO mode
1232 
1233   Level: beginner
1234 
1235   For more information please check  mkl_pardiso manual
1236 
1237 .seealso: PCFactorSetMatSolverPackage(), MatSolverPackage
1238 
1239 M*/
1240 #undef __FUNCT__
1241 #define __FUNCT__ "MatFactorGetSolverPackage_mkl_pardiso"
1242 static PetscErrorCode MatFactorGetSolverPackage_mkl_pardiso(Mat A, const MatSolverPackage *type)
1243 {
1244   PetscFunctionBegin;
1245   *type = MATSOLVERMKL_PARDISO;
1246   PetscFunctionReturn(0);
1247 }
1248 
1249 #undef __FUNCT__
1250 #define __FUNCT__ "MatGetFactor_aij_mkl_pardiso"
1251 PETSC_EXTERN PetscErrorCode MatGetFactor_aij_mkl_pardiso(Mat A,MatFactorType ftype,Mat *F)
1252 {
1253   Mat             B;
1254   PetscErrorCode  ierr;
1255   Mat_MKL_PARDISO *mat_mkl_pardiso;
1256   PetscBool       isSeqAIJ,isSeqBAIJ,isSeqSBAIJ;
1257 
1258   PetscFunctionBegin;
1259   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr);
1260   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr);
1261   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr);
1262   ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
1263   ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
1264   ierr = MatSetType(B,((PetscObject)A)->type_name);CHKERRQ(ierr);
1265   ierr = MatSeqAIJSetPreallocation(B,0,NULL);CHKERRQ(ierr);
1266   ierr = MatSeqBAIJSetPreallocation(B,A->rmap->bs,0,NULL);CHKERRQ(ierr);
1267   ierr = MatSeqSBAIJSetPreallocation(B,A->rmap->bs,0,NULL);CHKERRQ(ierr);
1268 
1269   ierr = PetscNewLog(B,&mat_mkl_pardiso);CHKERRQ(ierr);
1270   B->spptr = mat_mkl_pardiso;
1271 
1272   ierr = MatFactorMKL_PARDISOInitialize_Private(A, ftype, mat_mkl_pardiso);CHKERRQ(ierr);
1273   if (ftype == MAT_FACTOR_LU) {
1274     B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMKL_PARDISO;
1275     B->factortype            = MAT_FACTOR_LU;
1276     mat_mkl_pardiso->needsym = PETSC_FALSE;
1277     if (isSeqAIJ) {
1278       mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqaij;
1279     } else if (isSeqBAIJ) {
1280       mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqbaij;
1281     } else if (isSeqSBAIJ) {
1282       SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for PARDISO LU factor with SEQSBAIJ format! Use MAT_FACTOR_CHOLESKY instead");
1283     } else {
1284       SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for PARDISO LU with %s format",((PetscObject)A)->type_name);
1285     }
1286 #if defined(PETSC_USE_COMPLEX)
1287     mat_mkl_pardiso->schur_solver_type = 0; /* use a general solver for the moment */
1288     mat_mkl_pardiso->mtype = 13;
1289 #else
1290     if (A->structurally_symmetric) {
1291       mat_mkl_pardiso->mtype = 1;
1292     } else {
1293       mat_mkl_pardiso->mtype = 11;
1294     }
1295 #endif
1296     mat_mkl_pardiso->schur_solver_type = 0;
1297   } else {
1298     B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_AIJMKL_PARDISO;
1299     B->factortype                  = MAT_FACTOR_CHOLESKY;
1300     if (isSeqAIJ) {
1301       mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqaij;
1302     } else if (isSeqBAIJ) {
1303       mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqbaij;
1304     } else if (isSeqSBAIJ) {
1305       mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqsbaij;
1306     } else {
1307       SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for PARDISO CHOLESKY with %s format",((PetscObject)A)->type_name);
1308     }
1309     mat_mkl_pardiso->needsym = PETSC_TRUE;
1310 #if defined(PETSC_USE_COMPLEX)
1311     mat_mkl_pardiso->schur_solver_type = 0; /* use a general solver for the moment */
1312     mat_mkl_pardiso->mtype = 13;
1313 #else
1314     if (A->spd_set && A->spd) {
1315       mat_mkl_pardiso->schur_solver_type = 2;
1316       mat_mkl_pardiso->mtype = 2;
1317     } else {
1318       mat_mkl_pardiso->schur_solver_type = 1;
1319       mat_mkl_pardiso->mtype = -2;
1320     }
1321 #endif
1322   }
1323   mat_mkl_pardiso->Destroy = B->ops->destroy;
1324   B->ops->destroy          = MatDestroy_MKL_PARDISO;
1325   B->ops->view             = MatView_MKL_PARDISO;
1326   B->factortype            = ftype;
1327   B->ops->getinfo          = MatGetInfo_MKL_PARDISO;
1328   B->assembled             = PETSC_TRUE;
1329 
1330   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverPackage_C",MatFactorGetSolverPackage_mkl_pardiso);CHKERRQ(ierr);
1331   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MKL_PARDISO);CHKERRQ(ierr);
1332   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MKL_PARDISO);CHKERRQ(ierr);
1333   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSchurComplement_C",MatFactorGetSchurComplement_MKL_PARDISO);CHKERRQ(ierr);
1334   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorInvertSchurComplement_C",MatFactorInvertSchurComplement_MKL_PARDISO);CHKERRQ(ierr);
1335   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSolveSchurComplement_C",MatFactorSolveSchurComplement_MKL_PARDISO);CHKERRQ(ierr);
1336   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSolveSchurComplementTranspose_C",MatFactorSolveSchurComplementTranspose_MKL_PARDISO);CHKERRQ(ierr);
1337   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMkl_PardisoSetCntl_C",MatMkl_PardisoSetCntl_MKL_PARDISO);CHKERRQ(ierr);
1338 
1339   *F = B;
1340   PetscFunctionReturn(0);
1341 }
1342 
1343 #undef __FUNCT__
1344 #define __FUNCT__ "MatSolverPackageRegister_MKL_Pardiso"
1345 PETSC_EXTERN PetscErrorCode MatSolverPackageRegister_MKL_Pardiso(void)
1346 {
1347   PetscErrorCode ierr;
1348 
1349   PetscFunctionBegin;
1350   ierr = MatSolverPackageRegister(MATSOLVERMKL_PARDISO,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mkl_pardiso);CHKERRQ(ierr);
1351   ierr = MatSolverPackageRegister(MATSOLVERMKL_PARDISO,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mkl_pardiso);CHKERRQ(ierr);
1352   ierr = MatSolverPackageRegister(MATSOLVERMKL_PARDISO,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mkl_pardiso);CHKERRQ(ierr);
1353   PetscFunctionReturn(0);
1354 }
1355 
1356