xref: /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c (revision 61ce1fc3da74a1580e4144144c6e27813d78a46f)
1 #if defined(PETSC_HAVE_LIBMKL_INTEL_ILP64)
2 #define MKL_ILP64
3 #endif
4 
5 #include <../src/mat/impls/aij/seq/aij.h>        /*I "petscmat.h" I*/
6 #include <../src/mat/impls/sbaij/seq/sbaij.h>
7 #include <../src/mat/impls/dense/seq/dense.h>
8 #include <petscblaslapack.h>
9 
10 #include <stdio.h>
11 #include <stdlib.h>
12 #include <math.h>
13 #include <mkl_pardiso.h>
14 
15 PETSC_EXTERN void PetscSetMKL_PARDISOThreads(int);
16 
17 /*
18  *  Possible mkl_pardiso phases that controls the execution of the solver.
19  *  For more information check mkl_pardiso manual.
20  */
21 #define JOB_ANALYSIS 11
22 #define JOB_ANALYSIS_NUMERICAL_FACTORIZATION 12
23 #define JOB_ANALYSIS_NUMERICAL_FACTORIZATION_SOLVE_ITERATIVE_REFINEMENT 13
24 #define JOB_NUMERICAL_FACTORIZATION 22
25 #define JOB_NUMERICAL_FACTORIZATION_SOLVE_ITERATIVE_REFINEMENT 23
26 #define JOB_SOLVE_ITERATIVE_REFINEMENT 33
27 #define JOB_SOLVE_FORWARD_SUBSTITUTION 331
28 #define JOB_SOLVE_DIAGONAL_SUBSTITUTION 332
29 #define JOB_SOLVE_BACKWARD_SUBSTITUTION 333
30 #define JOB_RELEASE_OF_LU_MEMORY 0
31 #define JOB_RELEASE_OF_ALL_MEMORY -1
32 
33 #define IPARM_SIZE 64
34 
35 #if defined(PETSC_USE_64BIT_INDICES)
36  #if defined(PETSC_HAVE_LIBMKL_INTEL_ILP64)
37   /* sizeof(MKL_INT) == sizeof(long long int) if ilp64*/
38   #define INT_TYPE long long int
39   #define MKL_PARDISO pardiso
40   #define MKL_PARDISO_INIT pardisoinit
41  #else
42   #define INT_TYPE long long int
43   #define MKL_PARDISO pardiso_64
44   #define MKL_PARDISO_INIT pardiso_64init
45  #endif
46 #else
47  #define INT_TYPE int
48  #define MKL_PARDISO pardiso
49  #define MKL_PARDISO_INIT pardisoinit
50 #endif
51 
52 
53 /*
54  *  Internal data structure.
55  *  For more information check mkl_pardiso manual.
56  */
57 typedef struct {
58 
59   /* Configuration vector*/
60   INT_TYPE     iparm[IPARM_SIZE];
61 
62   /*
63    * Internal mkl_pardiso memory location.
64    * After the first call to mkl_pardiso do not modify pt, as that could cause a serious memory leak.
65    */
66   void         *pt[IPARM_SIZE];
67 
68   /* Basic mkl_pardiso info*/
69   INT_TYPE     phase, maxfct, mnum, mtype, n, nrhs, msglvl, err;
70 
71   /* Matrix structure*/
72   void         *a;
73   INT_TYPE     *ia, *ja;
74 
75   /* Number of non-zero elements*/
76   INT_TYPE     nz;
77 
78   /* Row permutaton vector*/
79   INT_TYPE     *perm;
80 
81   /* Define if matrix preserves sparse structure.*/
82   MatStructure matstruc;
83 
84   PetscBool    needsym;
85   PetscBool    freeaij;
86 
87   /* Schur complement */
88   PetscScalar  *schur;
89   PetscInt     schur_size;
90   PetscInt     *schur_idxs;
91   PetscScalar  *schur_work;
92   PetscBLASInt schur_work_size;
93   PetscInt     schur_solver_type;
94   PetscInt     *schur_pivots;
95   PetscBool    schur_factored;
96   PetscBool    schur_inverted;
97   PetscBool    solve_interior;
98 
99   /* True if mkl_pardiso function have been used.*/
100   PetscBool CleanUp;
101 
102   /* Conversion to a format suitable for MKL */
103   PetscErrorCode (*Convert)(Mat, PetscBool, MatReuse, PetscBool*, INT_TYPE*, INT_TYPE**, INT_TYPE**, void**);
104   PetscErrorCode (*Destroy)(Mat);
105 } Mat_MKL_PARDISO;
106 
107 #undef __FUNCT__
108 #define __FUNCT__ "MatMKLPardiso_Convert_seqsbaij"
109 PetscErrorCode MatMKLPardiso_Convert_seqsbaij(Mat A,PetscBool sym,MatReuse reuse,PetscBool *free,INT_TYPE *nnz,INT_TYPE **r,INT_TYPE **c,void **v)
110 {
111   Mat_SeqSBAIJ   *aa = (Mat_SeqSBAIJ*)A->data;
112   PetscInt       bs  = A->rmap->bs;
113 
114   PetscFunctionBegin;
115   if (!sym) {
116     SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"This should not happen");
117   }
118   if (bs == 1) { /* already in the correct format */
119     *v    = aa->a;
120     *r    = aa->i;
121     *c    = aa->j;
122     *nnz  = aa->nz;
123     *free = PETSC_FALSE;
124   } else {
125     SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Conversion from SeqSBAIJ to MKL Pardiso format still need to be implemented");
126   }
127   PetscFunctionReturn(0);
128 }
129 
130 #undef __FUNCT__
131 #define __FUNCT__ "MatMKLPardiso_Convert_seqbaij"
132 PetscErrorCode MatMKLPardiso_Convert_seqbaij(Mat A,PetscBool sym,MatReuse reuse,PetscBool *free,INT_TYPE *nnz,INT_TYPE **r,INT_TYPE **c,void **v)
133 {
134   PetscFunctionBegin;
135   SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Conversion from SeqBAIJ to MKL Pardiso format still need to be implemented");
136   PetscFunctionReturn(0);
137 }
138 
139 #undef __FUNCT__
140 #define __FUNCT__ "MatMKLPardiso_Convert_seqaij"
141 PetscErrorCode MatMKLPardiso_Convert_seqaij(Mat A,PetscBool sym,MatReuse reuse,PetscBool *free,INT_TYPE *nnz,INT_TYPE **r,INT_TYPE **c,void **v)
142 {
143   Mat_SeqAIJ     *aa = (Mat_SeqAIJ*)A->data;
144   PetscErrorCode ierr;
145 
146   PetscFunctionBegin;
147   if (!sym) { /* already in the correct format */
148     *v    = aa->a;
149     *r    = aa->i;
150     *c    = aa->j;
151     *nnz  = aa->nz;
152     *free = PETSC_FALSE;
153     PetscFunctionReturn(0);
154   }
155   /* need to get the triangular part */
156   if (reuse == MAT_INITIAL_MATRIX) {
157     PetscScalar *vals,*vv;
158     PetscInt    *row,*col,*jj;
159     PetscInt    m = A->rmap->n,nz,i;
160 
161     nz = 0;
162     for (i=0; i<m; i++) {
163       nz += aa->i[i+1] - aa->diag[i];
164     }
165     ierr = PetscMalloc2(m+1,&row,nz,&col);CHKERRQ(ierr);
166     ierr = PetscMalloc1(nz,&vals);CHKERRQ(ierr);
167     jj = col;
168     vv = vals;
169 
170     row[0] = 0;
171     for (i=0; i<m; i++) {
172       PetscInt    *aj = aa->j + aa->diag[i];
173       PetscScalar *av = aa->a + aa->diag[i];
174       PetscInt    rl = aa->i[i+1] - aa->diag[i],j;
175       for (j=0; j<rl; j++) {
176         *jj = *aj; jj++; aj++;
177         *vv = *av; vv++; av++;
178       }
179       row[i+1]    = row[i] + rl;
180     }
181     *v    = vals;
182     *r    = row;
183     *c    = col;
184     *nnz  = nz;
185     *free = PETSC_TRUE;
186   } else {
187     PetscScalar *vv;
188     PetscInt    m = A->rmap->n,i;
189 
190     vv = *v;
191     for (i=0; i<m; i++) {
192       PetscScalar *av = aa->a + aa->diag[i];
193       PetscInt    rl = aa->i[i+1] - aa->diag[i],j;
194       for (j=0; j<rl; j++) {
195         *vv = *av; vv++; av++;
196       }
197     }
198     *free = PETSC_TRUE;
199   }
200   PetscFunctionReturn(0);
201 }
202 
203 void pardiso_64init(void *pt, INT_TYPE *mtype, INT_TYPE iparm [])
204 {
205   int iparm_copy[IPARM_SIZE], mtype_copy, i;
206 
207   mtype_copy = *mtype;
208   pardisoinit(pt, &mtype_copy, iparm_copy);
209   for(i = 0; i < IPARM_SIZE; i++){
210     iparm[i] = iparm_copy[i];
211   }
212 }
213 
214 #undef __FUNCT__
215 #define __FUNCT__ "MatMKLPardisoFactorSchur_Private"
216 static PetscErrorCode MatMKLPardisoFactorSchur_Private(Mat_MKL_PARDISO* mpardiso)
217 {
218   PetscBLASInt   B_N,B_ierr;
219   PetscErrorCode ierr;
220 
221   PetscFunctionBegin;
222   if (mpardiso->schur_factored) {
223     PetscFunctionReturn(0);
224   }
225   ierr = PetscBLASIntCast(mpardiso->schur_size,&B_N);CHKERRQ(ierr);
226   switch (mpardiso->schur_solver_type) {
227     case 1: /* hermitian solver */
228       ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
229       PetscStackCallBLAS("LAPACKpotrf",LAPACKpotrf_("L",&B_N,mpardiso->schur,&B_N,&B_ierr));
230       ierr = PetscFPTrapPop();CHKERRQ(ierr);
231       if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in POTRF Lapack routine %d",(int)B_ierr);
232       break;
233     case 2: /* symmetric */
234       if (!mpardiso->schur_pivots) {
235         ierr = PetscMalloc1(B_N,&mpardiso->schur_pivots);CHKERRQ(ierr);
236       }
237       ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
238       PetscStackCallBLAS("LAPACKsytrf",LAPACKsytrf_("L",&B_N,mpardiso->schur,&B_N,mpardiso->schur_pivots,mpardiso->schur_work,&mpardiso->schur_work_size,&B_ierr));
239       ierr = PetscFPTrapPop();CHKERRQ(ierr);
240       if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in SYTRF Lapack routine %d",(int)B_ierr);
241       break;
242     default: /* general */
243       if (!mpardiso->schur_pivots) {
244         ierr = PetscMalloc1(B_N,&mpardiso->schur_pivots);CHKERRQ(ierr);
245       }
246       ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
247       PetscStackCallBLAS("LAPACKgetrf",LAPACKgetrf_(&B_N,&B_N,mpardiso->schur,&B_N,mpardiso->schur_pivots,&B_ierr));
248       ierr = PetscFPTrapPop();CHKERRQ(ierr);
249       if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in GETRF Lapack routine %d",(int)B_ierr);
250       break;
251   }
252   mpardiso->schur_factored = PETSC_TRUE;
253   PetscFunctionReturn(0);
254 }
255 
256 #undef __FUNCT__
257 #define __FUNCT__ "MatMKLPardisoInvertSchur_Private"
258 static PetscErrorCode MatMKLPardisoInvertSchur_Private(Mat_MKL_PARDISO* mpardiso)
259 {
260   PetscBLASInt   B_N,B_ierr;
261   PetscErrorCode ierr;
262 
263   PetscFunctionBegin;
264   ierr = MatMKLPardisoFactorSchur_Private(mpardiso);CHKERRQ(ierr);
265   ierr = PetscBLASIntCast(mpardiso->schur_size,&B_N);CHKERRQ(ierr);
266   switch (mpardiso->schur_solver_type) {
267     case 1: /* hermitian solver */
268       ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
269       PetscStackCallBLAS("LAPACKpotri",LAPACKpotri_("L",&B_N,mpardiso->schur,&B_N,&B_ierr));
270       ierr = PetscFPTrapPop();CHKERRQ(ierr);
271       if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in POTRI Lapack routine %d",(int)B_ierr);
272       break;
273     case 2: /* symmetric */
274       ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
275       PetscStackCallBLAS("LAPACKsytri",LAPACKsytri_("L",&B_N,mpardiso->schur,&B_N,mpardiso->schur_pivots,mpardiso->schur_work,&B_ierr));
276       ierr = PetscFPTrapPop();CHKERRQ(ierr);
277       if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in SYTRI Lapack routine %d",(int)B_ierr);
278       break;
279     default: /* general */
280       ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
281       PetscStackCallBLAS("LAPACKgetri",LAPACKgetri_(&B_N,mpardiso->schur,&B_N,mpardiso->schur_pivots,mpardiso->schur_work,&mpardiso->schur_work_size,&B_ierr));
282       ierr = PetscFPTrapPop();CHKERRQ(ierr);
283       if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in GETRI Lapack routine %d",(int)B_ierr);
284       break;
285   }
286   mpardiso->schur_inverted = PETSC_TRUE;
287   PetscFunctionReturn(0);
288 }
289 
290 #undef __FUNCT__
291 #define __FUNCT__ "MatMKLPardisoSolveSchur_Private"
292 static PetscErrorCode MatMKLPardisoSolveSchur_Private(Mat_MKL_PARDISO* mpardiso, PetscScalar *B, PetscScalar *X)
293 {
294   PetscScalar    one=1.,zero=0.,*schur_rhs,*schur_sol;
295   PetscBLASInt   B_N,B_Nrhs,B_ierr;
296   char           type[2];
297   PetscErrorCode ierr;
298 
299   PetscFunctionBegin;
300   ierr = MatMKLPardisoFactorSchur_Private(mpardiso);CHKERRQ(ierr);
301   ierr = PetscBLASIntCast(mpardiso->schur_size,&B_N);CHKERRQ(ierr);
302   ierr = PetscBLASIntCast(mpardiso->nrhs,&B_Nrhs);CHKERRQ(ierr);
303   if (X == B && mpardiso->schur_inverted) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"X and B cannot point to the same address");
304   if (X != B) { /* using LAPACK *TRS subroutines */
305     ierr = PetscMemcpy(X,B,B_N*B_Nrhs*sizeof(PetscScalar));CHKERRQ(ierr);
306   }
307   schur_rhs = B;
308   schur_sol = X;
309   switch (mpardiso->schur_solver_type) {
310     case 1: /* hermitian solver */
311       if (mpardiso->schur_inverted) { /* BLAShemm should go here */
312         PetscStackCallBLAS("BLASsymm",BLASsymm_("L","L",&B_N,&B_Nrhs,&one,mpardiso->schur,&B_N,schur_rhs,&B_N,&zero,schur_sol,&B_N));
313       } else {
314         ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
315         PetscStackCallBLAS("LAPACKpotrs",LAPACKpotrs_("L",&B_N,&B_Nrhs,mpardiso->schur,&B_N,schur_sol,&B_N,&B_ierr));
316         ierr = PetscFPTrapPop();CHKERRQ(ierr);
317         if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in POTRS Lapack routine %d",(int)B_ierr);
318       }
319       break;
320     case 2: /* symmetric solver */
321       if (mpardiso->schur_inverted) {
322         PetscStackCallBLAS("BLASsymm",BLASsymm_("L","L",&B_N,&B_Nrhs,&one,mpardiso->schur,&B_N,schur_rhs,&B_N,&zero,schur_sol,&B_N));
323       } else {
324         ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
325         PetscStackCallBLAS("LAPACKsytrs",LAPACKsytrs_("L",&B_N,&B_Nrhs,mpardiso->schur,&B_N,mpardiso->schur_pivots,schur_sol,&B_N,&B_ierr));
326         ierr = PetscFPTrapPop();CHKERRQ(ierr);
327         if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in SYTRS Lapack routine %d",(int)B_ierr);
328       }
329       break;
330     default: /* general */
331       switch (mpardiso->iparm[12-1]) {
332         case 1:
333           sprintf(type,"C");
334           break;
335         case 2:
336           sprintf(type,"T");
337           break;
338         default:
339           sprintf(type,"N");
340           break;
341       }
342       if (mpardiso->schur_inverted) {
343         PetscStackCallBLAS("BLASgemm",BLASgemm_(type,"N",&B_N,&B_Nrhs,&B_N,&one,mpardiso->schur,&B_N,schur_rhs,&B_N,&zero,schur_sol,&B_N));
344       } else {
345         ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr);
346         PetscStackCallBLAS("LAPACKgetrs",LAPACKgetrs_(type,&B_N,&B_Nrhs,mpardiso->schur,&B_N,mpardiso->schur_pivots,schur_sol,&B_N,&B_ierr));
347         ierr = PetscFPTrapPop();CHKERRQ(ierr);
348         if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in GETRS Lapack routine %d",(int)B_ierr);
349       }
350       break;
351   }
352   PetscFunctionReturn(0);
353 }
354 
355 
356 #undef __FUNCT__
357 #define __FUNCT__ "MatFactorSetSchurIS_MKL_PARDISO"
358 PetscErrorCode MatFactorSetSchurIS_MKL_PARDISO(Mat F, IS is)
359 {
360   Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr;
361   const PetscInt  *idxs;
362   PetscInt        size,i;
363   PetscMPIInt     csize;
364   PetscBool       sorted;
365   PetscErrorCode  ierr;
366 
367   PetscFunctionBegin;
368   ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&csize);CHKERRQ(ierr);
369   if (csize > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MKL_PARDISO parallel Schur complements not yet supported from PETSc\n");
370   ierr = ISSorted(is,&sorted);CHKERRQ(ierr);
371   if (!sorted) {
372     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"IS for MKL_PARDISO Schur complements needs to be sorted\n");
373   }
374   ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr);
375   if (mpardiso->schur_size != size) {
376     mpardiso->schur_size = size;
377     ierr = PetscFree2(mpardiso->schur,mpardiso->schur_work);CHKERRQ(ierr);
378     ierr = PetscFree(mpardiso->schur_idxs);CHKERRQ(ierr);
379     ierr = PetscFree(mpardiso->schur_pivots);CHKERRQ(ierr);
380     ierr = PetscBLASIntCast(PetscMax(mpardiso->n,2*size),&mpardiso->schur_work_size);CHKERRQ(ierr);
381     ierr = PetscMalloc2(size*size,&mpardiso->schur,mpardiso->schur_work_size,&mpardiso->schur_work);CHKERRQ(ierr);
382     ierr = PetscMalloc1(size,&mpardiso->schur_idxs);CHKERRQ(ierr);
383   }
384   ierr = PetscMemzero(mpardiso->perm,mpardiso->n*sizeof(INT_TYPE));CHKERRQ(ierr);
385   ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr);
386   ierr = PetscMemcpy(mpardiso->schur_idxs,idxs,size*sizeof(PetscInt));CHKERRQ(ierr);
387   for (i=0;i<size;i++) mpardiso->perm[idxs[i]] = 1;
388   ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr);
389   if (size) { /* turn on Schur switch if we the set of indices is not empty */
390     mpardiso->iparm[36-1] = 2;
391   }
392   mpardiso->schur_factored = PETSC_FALSE;
393   mpardiso->schur_inverted = PETSC_FALSE;
394   PetscFunctionReturn(0);
395 }
396 
397 #undef __FUNCT__
398 #define __FUNCT__ "MatFactorCreateSchurComplement_MKL_PARDISO"
399 PetscErrorCode MatFactorCreateSchurComplement_MKL_PARDISO(Mat F,Mat* S)
400 {
401   Mat             St;
402   Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr;
403   PetscScalar     *array;
404   PetscErrorCode  ierr;
405 
406   PetscFunctionBegin;
407   if (!mpardiso->iparm[36-1]) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it");
408   else if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before");
409 
410   ierr = MatCreate(PetscObjectComm((PetscObject)F),&St);CHKERRQ(ierr);
411   ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mpardiso->schur_size,mpardiso->schur_size);CHKERRQ(ierr);
412   ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr);
413   ierr = MatSetUp(St);CHKERRQ(ierr);
414   ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr);
415   ierr = PetscMemcpy(array,mpardiso->schur,mpardiso->schur_size*mpardiso->schur_size*sizeof(PetscScalar));CHKERRQ(ierr);
416   ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr);
417   *S = St;
418   PetscFunctionReturn(0);
419 }
420 
421 #undef __FUNCT__
422 #define __FUNCT__ "MatFactorGetSchurComplement_MKL_PARDISO"
423 PetscErrorCode MatFactorGetSchurComplement_MKL_PARDISO(Mat F,Mat* S)
424 {
425   Mat             St;
426   Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr;
427   PetscErrorCode  ierr;
428 
429   PetscFunctionBegin;
430   if (!mpardiso->iparm[36-1]) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it");
431   else if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before");
432 
433   ierr = MatCreateSeqDense(PetscObjectComm((PetscObject)F),mpardiso->schur_size,mpardiso->schur_size,mpardiso->schur,&St);CHKERRQ(ierr);
434   *S = St;
435   PetscFunctionReturn(0);
436 }
437 
438 #undef __FUNCT__
439 #define __FUNCT__ "MatFactorInvertSchurComplement_MKL_PARDISO"
440 PetscErrorCode MatFactorInvertSchurComplement_MKL_PARDISO(Mat F)
441 {
442   Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr;
443   PetscErrorCode  ierr;
444 
445   PetscFunctionBegin;
446   if (!mpardiso->iparm[36-1]) { /* do nothing */
447     PetscFunctionReturn(0);
448   }
449   if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before");
450   ierr = MatMKLPardisoInvertSchur_Private(mpardiso);CHKERRQ(ierr);
451   PetscFunctionReturn(0);
452 }
453 
454 #undef __FUNCT__
455 #define __FUNCT__ "MatFactorSolveSchurComplement_MKL_PARDISO"
456 PetscErrorCode MatFactorSolveSchurComplement_MKL_PARDISO(Mat F, Vec rhs, Vec sol)
457 {
458   Mat_MKL_PARDISO   *mpardiso =(Mat_MKL_PARDISO*)F->spptr;
459   PetscScalar       *asol,*arhs;
460   PetscErrorCode ierr;
461 
462   PetscFunctionBegin;
463   if (!mpardiso->iparm[36-1]) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it");
464   else if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before");
465 
466   mpardiso->nrhs = 1;
467   ierr = VecGetArrayRead(rhs,(const PetscScalar**)&arhs);CHKERRQ(ierr);
468   ierr = VecGetArray(sol,&asol);CHKERRQ(ierr);
469   ierr = MatMKLPardisoSolveSchur_Private(mpardiso,arhs,asol);CHKERRQ(ierr);
470   ierr = VecRestoreArrayRead(rhs,(const PetscScalar**)&arhs);CHKERRQ(ierr);
471   ierr = VecRestoreArray(sol,&asol);CHKERRQ(ierr);
472   PetscFunctionReturn(0);
473 }
474 
475 #undef __FUNCT__
476 #define __FUNCT__ "MatFactorSolveSchurComplementTranspose_MKL_PARDISO"
477 PetscErrorCode MatFactorSolveSchurComplementTranspose_MKL_PARDISO(Mat F, Vec rhs, Vec sol)
478 {
479   Mat_MKL_PARDISO   *mpardiso =(Mat_MKL_PARDISO*)F->spptr;
480   PetscScalar       *asol,*arhs;
481   PetscErrorCode ierr;
482 
483   PetscFunctionBegin;
484   if (!mpardiso->iparm[36-1]) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it");
485   else if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before");
486 
487   mpardiso->nrhs = 1;
488   ierr = VecGetArrayRead(rhs,(const PetscScalar**)&arhs);CHKERRQ(ierr);
489   ierr = VecGetArray(sol,&asol);CHKERRQ(ierr);
490   mpardiso->iparm[12 - 1] = 2;
491   ierr = MatMKLPardisoSolveSchur_Private(mpardiso,arhs,asol);CHKERRQ(ierr);
492   mpardiso->iparm[12 - 1] = 0;
493   ierr = VecRestoreArrayRead(rhs,(const PetscScalar**)&arhs);CHKERRQ(ierr);
494   ierr = VecRestoreArray(sol,&asol);CHKERRQ(ierr);
495   PetscFunctionReturn(0);
496 }
497 
498 #undef __FUNCT__
499 #define __FUNCT__ "MatDestroy_MKL_PARDISO"
500 PetscErrorCode MatDestroy_MKL_PARDISO(Mat A)
501 {
502   Mat_MKL_PARDISO *mat_mkl_pardiso=(Mat_MKL_PARDISO*)A->spptr;
503   PetscErrorCode  ierr;
504 
505   PetscFunctionBegin;
506   if (mat_mkl_pardiso->CleanUp) {
507     mat_mkl_pardiso->phase = JOB_RELEASE_OF_ALL_MEMORY;
508 
509     MKL_PARDISO (mat_mkl_pardiso->pt,
510       &mat_mkl_pardiso->maxfct,
511       &mat_mkl_pardiso->mnum,
512       &mat_mkl_pardiso->mtype,
513       &mat_mkl_pardiso->phase,
514       &mat_mkl_pardiso->n,
515       NULL,
516       NULL,
517       NULL,
518       mat_mkl_pardiso->perm,
519       &mat_mkl_pardiso->nrhs,
520       mat_mkl_pardiso->iparm,
521       &mat_mkl_pardiso->msglvl,
522       NULL,
523       NULL,
524       &mat_mkl_pardiso->err);
525   }
526   ierr = PetscFree(mat_mkl_pardiso->perm);CHKERRQ(ierr);
527   ierr = PetscFree2(mat_mkl_pardiso->schur,mat_mkl_pardiso->schur_work);CHKERRQ(ierr);
528   ierr = PetscFree(mat_mkl_pardiso->schur_idxs);CHKERRQ(ierr);
529   ierr = PetscFree(mat_mkl_pardiso->schur_pivots);CHKERRQ(ierr);
530   if (mat_mkl_pardiso->freeaij) {
531     ierr = PetscFree2(mat_mkl_pardiso->ia,mat_mkl_pardiso->ja);CHKERRQ(ierr);
532     ierr = PetscFree(mat_mkl_pardiso->a);CHKERRQ(ierr);
533   }
534   if (mat_mkl_pardiso->Destroy) {
535     ierr = (mat_mkl_pardiso->Destroy)(A);CHKERRQ(ierr);
536   }
537   ierr = PetscFree(A->spptr);CHKERRQ(ierr);
538 
539   /* clear composed functions */
540   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverPackage_C",NULL);CHKERRQ(ierr);
541   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr);
542   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr);
543   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSchurComplement_C",NULL);CHKERRQ(ierr);
544   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorInvertSchurComplement_C",NULL);CHKERRQ(ierr);
545   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSolveSchurComplement_C",NULL);CHKERRQ(ierr);
546   ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSolveSchurComplementTranspose_C",NULL);CHKERRQ(ierr);
547   ierr = PetscObjectComposeFunction((PetscObject)A,"MatMkl_PardisoSetCntl_C",NULL);CHKERRQ(ierr);
548   PetscFunctionReturn(0);
549 }
550 
551 #undef __FUNCT__
552 #define __FUNCT__ "MatMKLPardisoScatterSchur_Private"
553 static PetscErrorCode MatMKLPardisoScatterSchur_Private(Mat_MKL_PARDISO *mpardiso, PetscScalar *whole, PetscScalar *schur, PetscBool reduce)
554 {
555   PetscFunctionBegin;
556   if (reduce) { /* data given for the whole matrix */
557     PetscInt i,m=0,p=0;
558     for (i=0;i<mpardiso->nrhs;i++) {
559       PetscInt j;
560       for (j=0;j<mpardiso->schur_size;j++) {
561         schur[p+j] = whole[m+mpardiso->schur_idxs[j]];
562       }
563       m += mpardiso->n;
564       p += mpardiso->schur_size;
565     }
566   } else { /* from Schur to whole */
567     PetscInt i,m=0,p=0;
568     for (i=0;i<mpardiso->nrhs;i++) {
569       PetscInt j;
570       for (j=0;j<mpardiso->schur_size;j++) {
571         whole[m+mpardiso->schur_idxs[j]] = schur[p+j];
572       }
573       m += mpardiso->n;
574       p += mpardiso->schur_size;
575     }
576   }
577   PetscFunctionReturn(0);
578 }
579 
580 #undef __FUNCT__
581 #define __FUNCT__ "MatSolve_MKL_PARDISO"
582 PetscErrorCode MatSolve_MKL_PARDISO(Mat A,Vec b,Vec x)
583 {
584   Mat_MKL_PARDISO   *mat_mkl_pardiso=(Mat_MKL_PARDISO*)(A)->spptr;
585   PetscErrorCode    ierr;
586   PetscScalar       *xarray;
587   const PetscScalar *barray;
588 
589   PetscFunctionBegin;
590   mat_mkl_pardiso->nrhs = 1;
591   ierr = VecGetArray(x,&xarray);CHKERRQ(ierr);
592   ierr = VecGetArrayRead(b,&barray);CHKERRQ(ierr);
593 
594   if (!mat_mkl_pardiso->schur) {
595     mat_mkl_pardiso->phase = JOB_SOLVE_ITERATIVE_REFINEMENT;
596   } else {
597     mat_mkl_pardiso->phase = JOB_SOLVE_FORWARD_SUBSTITUTION;
598   }
599   mat_mkl_pardiso->iparm[6-1] = 0;
600 
601   MKL_PARDISO (mat_mkl_pardiso->pt,
602     &mat_mkl_pardiso->maxfct,
603     &mat_mkl_pardiso->mnum,
604     &mat_mkl_pardiso->mtype,
605     &mat_mkl_pardiso->phase,
606     &mat_mkl_pardiso->n,
607     mat_mkl_pardiso->a,
608     mat_mkl_pardiso->ia,
609     mat_mkl_pardiso->ja,
610     mat_mkl_pardiso->perm,
611     &mat_mkl_pardiso->nrhs,
612     mat_mkl_pardiso->iparm,
613     &mat_mkl_pardiso->msglvl,
614     (void*)barray,
615     (void*)xarray,
616     &mat_mkl_pardiso->err);
617 
618   if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err);
619 
620   if (mat_mkl_pardiso->schur) { /* solve Schur complement and expand solution */
621     PetscInt shift = mat_mkl_pardiso->schur_size;
622 
623     /* if inverted, uses BLAS *MM subroutines, otherwise LAPACK *TRS */
624     if (!mat_mkl_pardiso->schur_inverted) {
625       shift = 0;
626     }
627 
628     if (!mat_mkl_pardiso->solve_interior) {
629       /* solve Schur complement */
630       ierr = MatMKLPardisoScatterSchur_Private(mat_mkl_pardiso,xarray,mat_mkl_pardiso->schur_work,PETSC_TRUE);CHKERRQ(ierr);
631       ierr = MatMKLPardisoSolveSchur_Private(mat_mkl_pardiso,mat_mkl_pardiso->schur_work,mat_mkl_pardiso->schur_work+shift);CHKERRQ(ierr);
632       ierr = MatMKLPardisoScatterSchur_Private(mat_mkl_pardiso,xarray,mat_mkl_pardiso->schur_work+shift,PETSC_FALSE);CHKERRQ(ierr);
633     } else { /* if we are solving for the interior problem, any value in barray[schur] forward-substitued to xarray[schur] will be neglected */
634       PetscInt i;
635       for (i=0;i<mat_mkl_pardiso->schur_size;i++) {
636         xarray[mat_mkl_pardiso->schur_idxs[i]] = 0.;
637       }
638     }
639     /* expansion phase */
640     mat_mkl_pardiso->iparm[6-1] = 1;
641     mat_mkl_pardiso->phase = JOB_SOLVE_BACKWARD_SUBSTITUTION;
642     MKL_PARDISO (mat_mkl_pardiso->pt,
643       &mat_mkl_pardiso->maxfct,
644       &mat_mkl_pardiso->mnum,
645       &mat_mkl_pardiso->mtype,
646       &mat_mkl_pardiso->phase,
647       &mat_mkl_pardiso->n,
648       mat_mkl_pardiso->a,
649       mat_mkl_pardiso->ia,
650       mat_mkl_pardiso->ja,
651       mat_mkl_pardiso->perm,
652       &mat_mkl_pardiso->nrhs,
653       mat_mkl_pardiso->iparm,
654       &mat_mkl_pardiso->msglvl,
655       (void*)xarray,
656       (void*)mat_mkl_pardiso->schur_work, /* according to the specs, the solution vector is always used */
657       &mat_mkl_pardiso->err);
658 
659     if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err);
660     mat_mkl_pardiso->iparm[6-1] = 0;
661   }
662   ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr);
663   ierr = VecRestoreArrayRead(b,&barray);CHKERRQ(ierr);
664   mat_mkl_pardiso->CleanUp = PETSC_TRUE;
665   PetscFunctionReturn(0);
666 }
667 
668 #undef __FUNCT__
669 #define __FUNCT__ "MatSolveTranspose_MKL_PARDISO"
670 PetscErrorCode MatSolveTranspose_MKL_PARDISO(Mat A,Vec b,Vec x)
671 {
672   Mat_MKL_PARDISO *mat_mkl_pardiso=(Mat_MKL_PARDISO*)A->spptr;
673   PetscErrorCode  ierr;
674 
675   PetscFunctionBegin;
676 #if defined(PETSC_USE_COMPLEX)
677   mat_mkl_pardiso->iparm[12 - 1] = 1;
678 #else
679   mat_mkl_pardiso->iparm[12 - 1] = 2;
680 #endif
681   ierr = MatSolve_MKL_PARDISO(A,b,x);CHKERRQ(ierr);
682   mat_mkl_pardiso->iparm[12 - 1] = 0;
683   PetscFunctionReturn(0);
684 }
685 
686 #undef __FUNCT__
687 #define __FUNCT__ "MatMatSolve_MKL_PARDISO"
688 PetscErrorCode MatMatSolve_MKL_PARDISO(Mat A,Mat B,Mat X)
689 {
690   Mat_MKL_PARDISO   *mat_mkl_pardiso=(Mat_MKL_PARDISO*)(A)->spptr;
691   PetscErrorCode    ierr;
692   PetscScalar       *barray, *xarray;
693   PetscBool         flg;
694 
695   PetscFunctionBegin;
696   ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQDENSE,&flg);CHKERRQ(ierr);
697   if (!flg) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONG,"Matrix B must be MATSEQDENSE matrix");
698   ierr = PetscObjectTypeCompare((PetscObject)X,MATSEQDENSE,&flg);CHKERRQ(ierr);
699   if (!flg) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONG,"Matrix X must be MATSEQDENSE matrix");
700 
701   ierr = MatGetSize(B,NULL,(PetscInt*)&mat_mkl_pardiso->nrhs);CHKERRQ(ierr);
702 
703   if(mat_mkl_pardiso->nrhs > 0){
704     ierr = MatDenseGetArray(B,&barray);
705     ierr = MatDenseGetArray(X,&xarray);
706 
707     if (!mat_mkl_pardiso->schur) {
708       mat_mkl_pardiso->phase = JOB_SOLVE_ITERATIVE_REFINEMENT;
709     } else {
710       mat_mkl_pardiso->phase = JOB_SOLVE_FORWARD_SUBSTITUTION;
711     }
712     mat_mkl_pardiso->iparm[6-1] = 0;
713 
714     MKL_PARDISO (mat_mkl_pardiso->pt,
715       &mat_mkl_pardiso->maxfct,
716       &mat_mkl_pardiso->mnum,
717       &mat_mkl_pardiso->mtype,
718       &mat_mkl_pardiso->phase,
719       &mat_mkl_pardiso->n,
720       mat_mkl_pardiso->a,
721       mat_mkl_pardiso->ia,
722       mat_mkl_pardiso->ja,
723       mat_mkl_pardiso->perm,
724       &mat_mkl_pardiso->nrhs,
725       mat_mkl_pardiso->iparm,
726       &mat_mkl_pardiso->msglvl,
727       (void*)barray,
728       (void*)xarray,
729       &mat_mkl_pardiso->err);
730     if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err);
731 
732     if (mat_mkl_pardiso->schur) { /* solve Schur complement and expand solution */
733       PetscScalar *o_schur_work = NULL;
734       PetscInt    shift = mat_mkl_pardiso->schur_size*mat_mkl_pardiso->nrhs,scale;
735       PetscInt    mem = mat_mkl_pardiso->n*mat_mkl_pardiso->nrhs;
736 
737       /* allocate extra memory if it is needed */
738       scale = 1;
739       if (mat_mkl_pardiso->schur_inverted) {
740         scale = 2;
741       }
742       mem *= scale;
743       if (mem > mat_mkl_pardiso->schur_work_size) {
744         o_schur_work = mat_mkl_pardiso->schur_work;
745         ierr = PetscMalloc1(mem,&mat_mkl_pardiso->schur_work);CHKERRQ(ierr);
746       }
747 
748       /* if inverted, uses BLAS *MM subroutines, otherwise LAPACK *TRS */
749       if (!mat_mkl_pardiso->schur_inverted) {
750         shift = 0;
751       }
752 
753       /* solve Schur complement */
754       if (!mat_mkl_pardiso->solve_interior) {
755         ierr = MatMKLPardisoScatterSchur_Private(mat_mkl_pardiso,xarray,mat_mkl_pardiso->schur_work,PETSC_TRUE);CHKERRQ(ierr);
756         ierr = MatMKLPardisoSolveSchur_Private(mat_mkl_pardiso,mat_mkl_pardiso->schur_work,mat_mkl_pardiso->schur_work+shift);CHKERRQ(ierr);
757         ierr = MatMKLPardisoScatterSchur_Private(mat_mkl_pardiso,xarray,mat_mkl_pardiso->schur_work+shift,PETSC_FALSE);CHKERRQ(ierr);
758       } else { /* if we are solving for the interior problem, any value in barray[schur,n] forward-substitued to xarray[schur,n] will be neglected */
759         PetscInt i,n,m=0;
760         for (n=0;n<mat_mkl_pardiso->nrhs;n++) {
761           for (i=0;i<mat_mkl_pardiso->schur_size;i++) {
762             xarray[mat_mkl_pardiso->schur_idxs[i]+m] = 0.;
763           }
764           m += mat_mkl_pardiso->n;
765         }
766       }
767       /* expansion phase */
768       mat_mkl_pardiso->iparm[6-1] = 1;
769       mat_mkl_pardiso->phase = JOB_SOLVE_BACKWARD_SUBSTITUTION;
770       MKL_PARDISO (mat_mkl_pardiso->pt,
771         &mat_mkl_pardiso->maxfct,
772         &mat_mkl_pardiso->mnum,
773         &mat_mkl_pardiso->mtype,
774         &mat_mkl_pardiso->phase,
775         &mat_mkl_pardiso->n,
776         mat_mkl_pardiso->a,
777         mat_mkl_pardiso->ia,
778         mat_mkl_pardiso->ja,
779         mat_mkl_pardiso->perm,
780         &mat_mkl_pardiso->nrhs,
781         mat_mkl_pardiso->iparm,
782         &mat_mkl_pardiso->msglvl,
783         (void*)xarray,
784         (void*)mat_mkl_pardiso->schur_work, /* according to the specs, the solution vector is always used */
785         &mat_mkl_pardiso->err);
786       if (o_schur_work) { /* restore original schur_work (minimal size) */
787         ierr = PetscFree(mat_mkl_pardiso->schur_work);CHKERRQ(ierr);
788         mat_mkl_pardiso->schur_work = o_schur_work;
789       }
790       if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err);
791       mat_mkl_pardiso->iparm[6-1] = 0;
792     }
793   }
794   mat_mkl_pardiso->CleanUp = PETSC_TRUE;
795   PetscFunctionReturn(0);
796 }
797 
798 #undef __FUNCT__
799 #define __FUNCT__ "MatFactorNumeric_MKL_PARDISO"
800 PetscErrorCode MatFactorNumeric_MKL_PARDISO(Mat F,Mat A,const MatFactorInfo *info)
801 {
802   Mat_MKL_PARDISO *mat_mkl_pardiso=(Mat_MKL_PARDISO*)(F)->spptr;
803   PetscErrorCode  ierr;
804 
805   PetscFunctionBegin;
806   mat_mkl_pardiso->matstruc = SAME_NONZERO_PATTERN;
807   ierr = (*mat_mkl_pardiso->Convert)(A,mat_mkl_pardiso->needsym,MAT_REUSE_MATRIX,&mat_mkl_pardiso->freeaij,&mat_mkl_pardiso->nz,&mat_mkl_pardiso->ia,&mat_mkl_pardiso->ja,&mat_mkl_pardiso->a);CHKERRQ(ierr);
808 
809   mat_mkl_pardiso->phase = JOB_NUMERICAL_FACTORIZATION;
810   MKL_PARDISO (mat_mkl_pardiso->pt,
811     &mat_mkl_pardiso->maxfct,
812     &mat_mkl_pardiso->mnum,
813     &mat_mkl_pardiso->mtype,
814     &mat_mkl_pardiso->phase,
815     &mat_mkl_pardiso->n,
816     mat_mkl_pardiso->a,
817     mat_mkl_pardiso->ia,
818     mat_mkl_pardiso->ja,
819     mat_mkl_pardiso->perm,
820     &mat_mkl_pardiso->nrhs,
821     mat_mkl_pardiso->iparm,
822     &mat_mkl_pardiso->msglvl,
823     NULL,
824     (void*)mat_mkl_pardiso->schur,
825     &mat_mkl_pardiso->err);
826   if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err);
827 
828   if (mat_mkl_pardiso->schur) { /* schur output from pardiso is in row major format */
829     PetscInt j,k,n=mat_mkl_pardiso->schur_size;
830     if (!mat_mkl_pardiso->schur_solver_type) {
831       for (j=0; j<n; j++) {
832         for (k=0; k<j; k++) {
833           PetscScalar tmp = mat_mkl_pardiso->schur[j + k*n];
834           mat_mkl_pardiso->schur[j + k*n] = mat_mkl_pardiso->schur[k + j*n];
835           mat_mkl_pardiso->schur[k + j*n] = tmp;
836         }
837       }
838     } else { /* we could use row-major in LAPACK routines (e.g. use 'U' instead of 'L'; instead, I prefer consistency between data structures and swap to column major */
839       for (j=0; j<n; j++) {
840         for (k=0; k<j; k++) {
841           mat_mkl_pardiso->schur[j + k*n] = mat_mkl_pardiso->schur[k + j*n];
842         }
843       }
844     }
845   }
846   mat_mkl_pardiso->matstruc = SAME_NONZERO_PATTERN;
847   mat_mkl_pardiso->CleanUp  = PETSC_TRUE;
848   mat_mkl_pardiso->schur_factored = PETSC_FALSE;
849   mat_mkl_pardiso->schur_inverted = PETSC_FALSE;
850   PetscFunctionReturn(0);
851 }
852 
853 #undef __FUNCT__
854 #define __FUNCT__ "PetscSetMKL_PARDISOFromOptions"
855 PetscErrorCode PetscSetMKL_PARDISOFromOptions(Mat F, Mat A)
856 {
857   Mat_MKL_PARDISO     *mat_mkl_pardiso = (Mat_MKL_PARDISO*)F->spptr;
858   PetscErrorCode      ierr;
859   PetscInt            icntl,threads=1;
860   PetscBool           flg;
861 
862   PetscFunctionBegin;
863   ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MKL_PARDISO Options","Mat");CHKERRQ(ierr);
864 
865   ierr = PetscOptionsInt("-mat_mkl_pardiso_65","Number of threads to use within PARDISO","None",threads,&threads,&flg);CHKERRQ(ierr);
866   if (flg) PetscSetMKL_PARDISOThreads((int)threads);
867 
868   ierr = PetscOptionsInt("-mat_mkl_pardiso_66","Maximum number of factors with identical sparsity structure that must be kept in memory at the same time","None",mat_mkl_pardiso->maxfct,&icntl,&flg);CHKERRQ(ierr);
869   if (flg) mat_mkl_pardiso->maxfct = icntl;
870 
871   ierr = PetscOptionsInt("-mat_mkl_pardiso_67","Indicates the actual matrix for the solution phase","None",mat_mkl_pardiso->mnum,&icntl,&flg);CHKERRQ(ierr);
872   if (flg) mat_mkl_pardiso->mnum = icntl;
873 
874   ierr = PetscOptionsInt("-mat_mkl_pardiso_68","Message level information","None",mat_mkl_pardiso->msglvl,&icntl,&flg);CHKERRQ(ierr);
875   if (flg) mat_mkl_pardiso->msglvl = icntl;
876 
877   ierr = PetscOptionsInt("-mat_mkl_pardiso_69","Defines the matrix type","None",mat_mkl_pardiso->mtype,&icntl,&flg);CHKERRQ(ierr);
878   if(flg){
879     void *pt[IPARM_SIZE];
880     mat_mkl_pardiso->mtype = icntl;
881     MKL_PARDISO_INIT(pt, &mat_mkl_pardiso->mtype, mat_mkl_pardiso->iparm);
882 #if defined(PETSC_USE_REAL_SINGLE)
883     mat_mkl_pardiso->iparm[27] = 1;
884 #else
885     mat_mkl_pardiso->iparm[27] = 0;
886 #endif
887     mat_mkl_pardiso->iparm[34] = 1; /* use 0-based indexing */
888   }
889   ierr = PetscOptionsInt("-mat_mkl_pardiso_1","Use default values","None",mat_mkl_pardiso->iparm[0],&icntl,&flg);CHKERRQ(ierr);
890 
891   if(flg && icntl != 0){
892     ierr = PetscOptionsInt("-mat_mkl_pardiso_2","Fill-in reducing ordering for the input matrix","None",mat_mkl_pardiso->iparm[1],&icntl,&flg);CHKERRQ(ierr);
893     if (flg) mat_mkl_pardiso->iparm[1] = icntl;
894 
895     ierr = PetscOptionsInt("-mat_mkl_pardiso_4","Preconditioned CGS/CG","None",mat_mkl_pardiso->iparm[3],&icntl,&flg);CHKERRQ(ierr);
896     if (flg) mat_mkl_pardiso->iparm[3] = icntl;
897 
898     ierr = PetscOptionsInt("-mat_mkl_pardiso_5","User permutation","None",mat_mkl_pardiso->iparm[4],&icntl,&flg);CHKERRQ(ierr);
899     if (flg) mat_mkl_pardiso->iparm[4] = icntl;
900 
901     ierr = PetscOptionsInt("-mat_mkl_pardiso_6","Write solution on x","None",mat_mkl_pardiso->iparm[5],&icntl,&flg);CHKERRQ(ierr);
902     if (flg) mat_mkl_pardiso->iparm[5] = icntl;
903 
904     ierr = PetscOptionsInt("-mat_mkl_pardiso_8","Iterative refinement step","None",mat_mkl_pardiso->iparm[7],&icntl,&flg);CHKERRQ(ierr);
905     if (flg) mat_mkl_pardiso->iparm[7] = icntl;
906 
907     ierr = PetscOptionsInt("-mat_mkl_pardiso_10","Pivoting perturbation","None",mat_mkl_pardiso->iparm[9],&icntl,&flg);CHKERRQ(ierr);
908     if (flg) mat_mkl_pardiso->iparm[9] = icntl;
909 
910     ierr = PetscOptionsInt("-mat_mkl_pardiso_11","Scaling vectors","None",mat_mkl_pardiso->iparm[10],&icntl,&flg);CHKERRQ(ierr);
911     if (flg) mat_mkl_pardiso->iparm[10] = icntl;
912 
913     ierr = PetscOptionsInt("-mat_mkl_pardiso_12","Solve with transposed or conjugate transposed matrix A","None",mat_mkl_pardiso->iparm[11],&icntl,&flg);CHKERRQ(ierr);
914     if (flg) mat_mkl_pardiso->iparm[11] = icntl;
915 
916     ierr = PetscOptionsInt("-mat_mkl_pardiso_13","Improved accuracy using (non-) symmetric weighted matching","None",mat_mkl_pardiso->iparm[12],&icntl,&flg);CHKERRQ(ierr);
917     if (flg) mat_mkl_pardiso->iparm[12] = icntl;
918 
919     ierr = PetscOptionsInt("-mat_mkl_pardiso_18","Numbers of non-zero elements","None",mat_mkl_pardiso->iparm[17],&icntl,&flg);CHKERRQ(ierr);
920     if (flg) mat_mkl_pardiso->iparm[17] = icntl;
921 
922     ierr = PetscOptionsInt("-mat_mkl_pardiso_19","Report number of floating point operations","None",mat_mkl_pardiso->iparm[18],&icntl,&flg);CHKERRQ(ierr);
923     if (flg) mat_mkl_pardiso->iparm[18] = icntl;
924 
925     ierr = PetscOptionsInt("-mat_mkl_pardiso_21","Pivoting for symmetric indefinite matrices","None",mat_mkl_pardiso->iparm[20],&icntl,&flg);CHKERRQ(ierr);
926     if (flg) mat_mkl_pardiso->iparm[20] = icntl;
927 
928     ierr = PetscOptionsInt("-mat_mkl_pardiso_24","Parallel factorization control","None",mat_mkl_pardiso->iparm[23],&icntl,&flg);CHKERRQ(ierr);
929     if (flg) mat_mkl_pardiso->iparm[23] = icntl;
930 
931     ierr = PetscOptionsInt("-mat_mkl_pardiso_25","Parallel forward/backward solve control","None",mat_mkl_pardiso->iparm[24],&icntl,&flg);CHKERRQ(ierr);
932     if (flg) mat_mkl_pardiso->iparm[24] = icntl;
933 
934     ierr = PetscOptionsInt("-mat_mkl_pardiso_27","Matrix checker","None",mat_mkl_pardiso->iparm[26],&icntl,&flg);CHKERRQ(ierr);
935     if (flg) mat_mkl_pardiso->iparm[26] = icntl;
936 
937     ierr = PetscOptionsInt("-mat_mkl_pardiso_31","Partial solve and computing selected components of the solution vectors","None",mat_mkl_pardiso->iparm[30],&icntl,&flg);CHKERRQ(ierr);
938     if (flg) mat_mkl_pardiso->iparm[30] = icntl;
939 
940     ierr = PetscOptionsInt("-mat_mkl_pardiso_34","Optimal number of threads for conditional numerical reproducibility (CNR) mode","None",mat_mkl_pardiso->iparm[33],&icntl,&flg);CHKERRQ(ierr);
941     if (flg) mat_mkl_pardiso->iparm[33] = icntl;
942 
943     ierr = PetscOptionsInt("-mat_mkl_pardiso_60","Intel MKL_PARDISO mode","None",mat_mkl_pardiso->iparm[59],&icntl,&flg);CHKERRQ(ierr);
944     if (flg) mat_mkl_pardiso->iparm[59] = icntl;
945   }
946   PetscOptionsEnd();
947   PetscFunctionReturn(0);
948 }
949 
950 #undef __FUNCT__
951 #define __FUNCT__ "MatFactorMKL_PARDISOInitialize_Private"
952 PetscErrorCode MatFactorMKL_PARDISOInitialize_Private(Mat A, MatFactorType ftype, Mat_MKL_PARDISO *mat_mkl_pardiso)
953 {
954   PetscErrorCode ierr;
955   PetscInt       i;
956 
957   PetscFunctionBegin;
958   for ( i = 0; i < IPARM_SIZE; i++ ){
959     mat_mkl_pardiso->iparm[i] = 0;
960   }
961   for ( i = 0; i < IPARM_SIZE; i++ ){
962     mat_mkl_pardiso->pt[i] = 0;
963   }
964   /* Default options for both sym and unsym */
965   mat_mkl_pardiso->iparm[ 0] =  1; /* Solver default parameters overriden with provided by iparm */
966   mat_mkl_pardiso->iparm[ 1] =  2; /* Metis reordering */
967   mat_mkl_pardiso->iparm[ 5] =  0; /* Write solution into x */
968   mat_mkl_pardiso->iparm[ 7] =  0; /* Max number of iterative refinement steps */
969   mat_mkl_pardiso->iparm[17] = -1; /* Output: Number of nonzeros in the factor LU */
970   mat_mkl_pardiso->iparm[18] = -1; /* Output: Mflops for LU factorization */
971 #if 0
972   mat_mkl_pardiso->iparm[23] =  1; /* Parallel factorization control*/
973 #endif
974   mat_mkl_pardiso->iparm[34] =  1; /* Cluster Sparse Solver use C-style indexing for ia and ja arrays */
975   mat_mkl_pardiso->iparm[39] =  0; /* Input: matrix/rhs/solution stored on master */
976 
977   mat_mkl_pardiso->CleanUp   = PETSC_FALSE;
978   mat_mkl_pardiso->maxfct    = 1; /* Maximum number of numerical factorizations. */
979   mat_mkl_pardiso->mnum      = 1; /* Which factorization to use. */
980   mat_mkl_pardiso->msglvl    = 0; /* 0: do not print 1: Print statistical information in file */
981   mat_mkl_pardiso->phase     = -1;
982   mat_mkl_pardiso->err       = 0;
983 
984   mat_mkl_pardiso->n         = A->rmap->N;
985   mat_mkl_pardiso->nrhs      = 1;
986   mat_mkl_pardiso->err       = 0;
987   mat_mkl_pardiso->phase     = -1;
988 
989   if(ftype == MAT_FACTOR_LU){
990     mat_mkl_pardiso->iparm[ 9] = 13; /* Perturb the pivot elements with 1E-13 */
991     mat_mkl_pardiso->iparm[10] =  1; /* Use nonsymmetric permutation and scaling MPS */
992     mat_mkl_pardiso->iparm[12] =  1; /* Switch on Maximum Weighted Matching algorithm (default for non-symmetric) */
993 
994   } else {
995     mat_mkl_pardiso->iparm[ 9] = 13; /* Perturb the pivot elements with 1E-13 */
996     mat_mkl_pardiso->iparm[10] = 0; /* Use nonsymmetric permutation and scaling MPS */
997     mat_mkl_pardiso->iparm[12] = 1; /* Switch on Maximum Weighted Matching algorithm (default for non-symmetric) */
998 /*    mat_mkl_pardiso->iparm[20] =  1; */ /* Apply 1x1 and 2x2 Bunch-Kaufman pivoting during the factorization process */
999 #if defined(PETSC_USE_DEBUG)
1000     mat_mkl_pardiso->iparm[26] = 1; /* Matrix checker */
1001 #endif
1002   }
1003   ierr = PetscMalloc1(A->rmap->N*sizeof(INT_TYPE), &mat_mkl_pardiso->perm);CHKERRQ(ierr);
1004   for(i = 0; i < A->rmap->N; i++){
1005     mat_mkl_pardiso->perm[i] = 0;
1006   }
1007   mat_mkl_pardiso->schur_size = 0;
1008   PetscFunctionReturn(0);
1009 }
1010 
1011 #undef __FUNCT__
1012 #define __FUNCT__ "MatFactorSymbolic_AIJMKL_PARDISO_Private"
1013 PetscErrorCode MatFactorSymbolic_AIJMKL_PARDISO_Private(Mat F,Mat A,const MatFactorInfo *info)
1014 {
1015   Mat_MKL_PARDISO *mat_mkl_pardiso = (Mat_MKL_PARDISO*)F->spptr;
1016   PetscErrorCode  ierr;
1017 
1018   PetscFunctionBegin;
1019   mat_mkl_pardiso->matstruc = DIFFERENT_NONZERO_PATTERN;
1020   ierr = PetscSetMKL_PARDISOFromOptions(F,A);CHKERRQ(ierr);
1021 
1022   /* throw away any previously computed structure */
1023   if (mat_mkl_pardiso->freeaij) {
1024     ierr = PetscFree2(mat_mkl_pardiso->ia,mat_mkl_pardiso->ja);CHKERRQ(ierr);
1025     ierr = PetscFree(mat_mkl_pardiso->a);CHKERRQ(ierr);
1026   }
1027   ierr = (*mat_mkl_pardiso->Convert)(A,mat_mkl_pardiso->needsym,MAT_INITIAL_MATRIX,&mat_mkl_pardiso->freeaij,&mat_mkl_pardiso->nz,&mat_mkl_pardiso->ia,&mat_mkl_pardiso->ja,&mat_mkl_pardiso->a);CHKERRQ(ierr);
1028   mat_mkl_pardiso->n = A->rmap->N;
1029 
1030   mat_mkl_pardiso->phase = JOB_ANALYSIS;
1031 
1032   MKL_PARDISO (mat_mkl_pardiso->pt,
1033     &mat_mkl_pardiso->maxfct,
1034     &mat_mkl_pardiso->mnum,
1035     &mat_mkl_pardiso->mtype,
1036     &mat_mkl_pardiso->phase,
1037     &mat_mkl_pardiso->n,
1038     mat_mkl_pardiso->a,
1039     mat_mkl_pardiso->ia,
1040     mat_mkl_pardiso->ja,
1041     mat_mkl_pardiso->perm,
1042     &mat_mkl_pardiso->nrhs,
1043     mat_mkl_pardiso->iparm,
1044     &mat_mkl_pardiso->msglvl,
1045     NULL,
1046     NULL,
1047     &mat_mkl_pardiso->err);
1048   if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d\n. Please check manual",mat_mkl_pardiso->err);
1049 
1050   mat_mkl_pardiso->CleanUp = PETSC_TRUE;
1051 
1052   if (F->factortype == MAT_FACTOR_LU) {
1053     F->ops->lufactornumeric = MatFactorNumeric_MKL_PARDISO;
1054   } else {
1055     F->ops->choleskyfactornumeric = MatFactorNumeric_MKL_PARDISO;
1056   }
1057   F->ops->solve           = MatSolve_MKL_PARDISO;
1058   F->ops->solvetranspose  = MatSolveTranspose_MKL_PARDISO;
1059   F->ops->matsolve        = MatMatSolve_MKL_PARDISO;
1060   PetscFunctionReturn(0);
1061 }
1062 
1063 #undef __FUNCT__
1064 #define __FUNCT__ "MatLUFactorSymbolic_AIJMKL_PARDISO"
1065 PetscErrorCode MatLUFactorSymbolic_AIJMKL_PARDISO(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info)
1066 {
1067   PetscErrorCode ierr;
1068 
1069   PetscFunctionBegin;
1070   ierr = MatFactorSymbolic_AIJMKL_PARDISO_Private(F, A, info);CHKERRQ(ierr);
1071   PetscFunctionReturn(0);
1072 }
1073 
1074 #undef __FUNCT__
1075 #define __FUNCT__ "MatCholeskyFactorSymbolic_AIJMKL_PARDISO"
1076 PetscErrorCode MatCholeskyFactorSymbolic_AIJMKL_PARDISO(Mat F,Mat A,IS r,const MatFactorInfo *info)
1077 {
1078   PetscErrorCode ierr;
1079 
1080   PetscFunctionBegin;
1081   ierr = MatFactorSymbolic_AIJMKL_PARDISO_Private(F, A, info);CHKERRQ(ierr);
1082   PetscFunctionReturn(0);
1083 }
1084 
1085 #undef __FUNCT__
1086 #define __FUNCT__ "MatView_MKL_PARDISO"
1087 PetscErrorCode MatView_MKL_PARDISO(Mat A, PetscViewer viewer)
1088 {
1089   PetscErrorCode    ierr;
1090   PetscBool         iascii;
1091   PetscViewerFormat format;
1092   Mat_MKL_PARDISO   *mat_mkl_pardiso=(Mat_MKL_PARDISO*)A->spptr;
1093   PetscInt          i;
1094 
1095   PetscFunctionBegin;
1096   if (A->ops->solve != MatSolve_MKL_PARDISO) PetscFunctionReturn(0);
1097 
1098   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
1099   if (iascii) {
1100     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
1101     if (format == PETSC_VIEWER_ASCII_INFO) {
1102       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO run parameters:\n");CHKERRQ(ierr);
1103       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO phase:             %d \n",mat_mkl_pardiso->phase);CHKERRQ(ierr);
1104       for(i = 1; i <= 64; i++){
1105         ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO iparm[%d]:     %d \n",i, mat_mkl_pardiso->iparm[i - 1]);CHKERRQ(ierr);
1106       }
1107       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO maxfct:     %d \n", mat_mkl_pardiso->maxfct);CHKERRQ(ierr);
1108       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO mnum:     %d \n", mat_mkl_pardiso->mnum);CHKERRQ(ierr);
1109       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO mtype:     %d \n", mat_mkl_pardiso->mtype);CHKERRQ(ierr);
1110       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO n:     %d \n", mat_mkl_pardiso->n);CHKERRQ(ierr);
1111       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO nrhs:     %d \n", mat_mkl_pardiso->nrhs);CHKERRQ(ierr);
1112       ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO msglvl:     %d \n", mat_mkl_pardiso->msglvl);CHKERRQ(ierr);
1113     }
1114   }
1115   PetscFunctionReturn(0);
1116 }
1117 
1118 
1119 #undef __FUNCT__
1120 #define __FUNCT__ "MatGetInfo_MKL_PARDISO"
1121 PetscErrorCode MatGetInfo_MKL_PARDISO(Mat A, MatInfoType flag, MatInfo *info)
1122 {
1123   Mat_MKL_PARDISO *mat_mkl_pardiso =(Mat_MKL_PARDISO*)A->spptr;
1124 
1125   PetscFunctionBegin;
1126   info->block_size        = 1.0;
1127   info->nz_used           = mat_mkl_pardiso->nz;
1128   info->nz_allocated      = mat_mkl_pardiso->nz;
1129   info->nz_unneeded       = 0.0;
1130   info->assemblies        = 0.0;
1131   info->mallocs           = 0.0;
1132   info->memory            = 0.0;
1133   info->fill_ratio_given  = 0;
1134   info->fill_ratio_needed = 0;
1135   info->factor_mallocs    = 0;
1136   PetscFunctionReturn(0);
1137 }
1138 
1139 #undef __FUNCT__
1140 #define __FUNCT__ "MatMkl_PardisoSetCntl_MKL_PARDISO"
1141 PetscErrorCode MatMkl_PardisoSetCntl_MKL_PARDISO(Mat F,PetscInt icntl,PetscInt ival)
1142 {
1143   Mat_MKL_PARDISO *mat_mkl_pardiso =(Mat_MKL_PARDISO*)F->spptr;
1144 
1145   PetscFunctionBegin;
1146   if(icntl <= 64){
1147     mat_mkl_pardiso->iparm[icntl - 1] = ival;
1148   } else {
1149     if(icntl == 65)
1150       PetscSetMKL_PARDISOThreads(ival);
1151     else if(icntl == 66)
1152       mat_mkl_pardiso->maxfct = ival;
1153     else if(icntl == 67)
1154       mat_mkl_pardiso->mnum = ival;
1155     else if(icntl == 68)
1156       mat_mkl_pardiso->msglvl = ival;
1157     else if(icntl == 69){
1158       void *pt[IPARM_SIZE];
1159       mat_mkl_pardiso->mtype = ival;
1160       MKL_PARDISO_INIT(pt, &mat_mkl_pardiso->mtype, mat_mkl_pardiso->iparm);
1161 #if defined(PETSC_USE_REAL_SINGLE)
1162       mat_mkl_pardiso->iparm[27] = 1;
1163 #else
1164       mat_mkl_pardiso->iparm[27] = 0;
1165 #endif
1166       mat_mkl_pardiso->iparm[34] = 1;
1167     } else if(icntl==70) {
1168       mat_mkl_pardiso->solve_interior = !!ival;
1169     }
1170   }
1171   PetscFunctionReturn(0);
1172 }
1173 
1174 #undef __FUNCT__
1175 #define __FUNCT__ "MatMkl_PardisoSetCntl"
1176 /*@
1177   MatMkl_PardisoSetCntl - Set Mkl_Pardiso parameters
1178 
1179    Logically Collective on Mat
1180 
1181    Input Parameters:
1182 +  F - the factored matrix obtained by calling MatGetFactor()
1183 .  icntl - index of Mkl_Pardiso parameter
1184 -  ival - value of Mkl_Pardiso parameter
1185 
1186   Options Database:
1187 .   -mat_mkl_pardiso_<icntl> <ival>
1188 
1189    Level: beginner
1190 
1191    References: Mkl_Pardiso Users' Guide
1192 
1193 .seealso: MatGetFactor()
1194 @*/
1195 PetscErrorCode MatMkl_PardisoSetCntl(Mat F,PetscInt icntl,PetscInt ival)
1196 {
1197   PetscErrorCode ierr;
1198 
1199   PetscFunctionBegin;
1200   ierr = PetscTryMethod(F,"MatMkl_PardisoSetCntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr);
1201   PetscFunctionReturn(0);
1202 }
1203 
1204 /*MC
1205   MATSOLVERMKL_PARDISO -  A matrix type providing direct solvers (LU) for
1206   sequential matrices via the external package MKL_PARDISO.
1207 
1208   Works with MATSEQAIJ matrices
1209 
1210   Use -pc_type lu -pc_factor_mat_solver_package mkl_pardiso to us this direct solver
1211 
1212   Options Database Keys:
1213 + -mat_mkl_pardiso_65 - Number of threads to use within MKL_PARDISO
1214 . -mat_mkl_pardiso_66 - Maximum number of factors with identical sparsity structure that must be kept in memory at the same time
1215 . -mat_mkl_pardiso_67 - Indicates the actual matrix for the solution phase
1216 . -mat_mkl_pardiso_68 - Message level information
1217 . -mat_mkl_pardiso_69 - Defines the matrix type. IMPORTANT: When you set this flag, iparm parameters are going to be set to the default ones for the matrix type
1218 . -mat_mkl_pardiso_1  - Use default values
1219 . -mat_mkl_pardiso_2  - Fill-in reducing ordering for the input matrix
1220 . -mat_mkl_pardiso_4  - Preconditioned CGS/CG
1221 . -mat_mkl_pardiso_5  - User permutation
1222 . -mat_mkl_pardiso_6  - Write solution on x
1223 . -mat_mkl_pardiso_8  - Iterative refinement step
1224 . -mat_mkl_pardiso_10 - Pivoting perturbation
1225 . -mat_mkl_pardiso_11 - Scaling vectors
1226 . -mat_mkl_pardiso_12 - Solve with transposed or conjugate transposed matrix A
1227 . -mat_mkl_pardiso_13 - Improved accuracy using (non-) symmetric weighted matching
1228 . -mat_mkl_pardiso_18 - Numbers of non-zero elements
1229 . -mat_mkl_pardiso_19 - Report number of floating point operations
1230 . -mat_mkl_pardiso_21 - Pivoting for symmetric indefinite matrices
1231 . -mat_mkl_pardiso_24 - Parallel factorization control
1232 . -mat_mkl_pardiso_25 - Parallel forward/backward solve control
1233 . -mat_mkl_pardiso_27 - Matrix checker
1234 . -mat_mkl_pardiso_31 - Partial solve and computing selected components of the solution vectors
1235 . -mat_mkl_pardiso_34 - Optimal number of threads for conditional numerical reproducibility (CNR) mode
1236 - -mat_mkl_pardiso_60 - Intel MKL_PARDISO mode
1237 
1238   Level: beginner
1239 
1240   For more information please check  mkl_pardiso manual
1241 
1242 .seealso: PCFactorSetMatSolverPackage(), MatSolverPackage
1243 
1244 M*/
1245 #undef __FUNCT__
1246 #define __FUNCT__ "MatFactorGetSolverPackage_mkl_pardiso"
1247 static PetscErrorCode MatFactorGetSolverPackage_mkl_pardiso(Mat A, const MatSolverPackage *type)
1248 {
1249   PetscFunctionBegin;
1250   *type = MATSOLVERMKL_PARDISO;
1251   PetscFunctionReturn(0);
1252 }
1253 
1254 #undef __FUNCT__
1255 #define __FUNCT__ "MatGetFactor_aij_mkl_pardiso"
1256 PETSC_EXTERN PetscErrorCode MatGetFactor_aij_mkl_pardiso(Mat A,MatFactorType ftype,Mat *F)
1257 {
1258   Mat             B;
1259   PetscErrorCode  ierr;
1260   Mat_MKL_PARDISO *mat_mkl_pardiso;
1261   PetscBool       isSeqAIJ,isSeqBAIJ,isSeqSBAIJ;
1262 
1263   PetscFunctionBegin;
1264   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr);
1265   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr);
1266   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr);
1267   ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
1268   ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
1269   ierr = MatSetType(B,((PetscObject)A)->type_name);CHKERRQ(ierr);
1270   ierr = MatSeqAIJSetPreallocation(B,0,NULL);CHKERRQ(ierr);
1271   ierr = MatSeqBAIJSetPreallocation(B,A->rmap->bs,0,NULL);CHKERRQ(ierr);
1272   ierr = MatSeqSBAIJSetPreallocation(B,A->rmap->bs,0,NULL);CHKERRQ(ierr);
1273 
1274   ierr = PetscNewLog(B,&mat_mkl_pardiso);CHKERRQ(ierr);
1275   B->spptr = mat_mkl_pardiso;
1276 
1277   ierr = MatFactorMKL_PARDISOInitialize_Private(A, ftype, mat_mkl_pardiso);CHKERRQ(ierr);
1278   if (ftype == MAT_FACTOR_LU) {
1279     B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMKL_PARDISO;
1280     B->factortype            = MAT_FACTOR_LU;
1281     mat_mkl_pardiso->needsym = PETSC_FALSE;
1282     if (isSeqAIJ) {
1283       mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqaij;
1284     } else if (isSeqBAIJ) {
1285       mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqbaij;
1286     } else if (isSeqSBAIJ) {
1287       SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for PARDISO LU factor with SEQSBAIJ format! Use MAT_FACTOR_CHOLESKY instead");
1288     } else {
1289       SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for PARDISO LU with %s format",((PetscObject)A)->type_name);
1290     }
1291 #if defined(PETSC_USE_COMPLEX)
1292     mat_mkl_pardiso->schur_solver_type = 0; /* use a general solver for the moment */
1293     mat_mkl_pardiso->mtype = 13;
1294 #else
1295     if (A->structurally_symmetric) {
1296       mat_mkl_pardiso->mtype = 1;
1297     } else {
1298       mat_mkl_pardiso->mtype = 11;
1299     }
1300 #endif
1301     mat_mkl_pardiso->schur_solver_type = 0;
1302   } else {
1303     B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_AIJMKL_PARDISO;
1304     B->factortype                  = MAT_FACTOR_CHOLESKY;
1305     if (isSeqAIJ) {
1306       mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqaij;
1307     } else if (isSeqBAIJ) {
1308       mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqbaij;
1309     } else if (isSeqSBAIJ) {
1310       mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqsbaij;
1311     } else {
1312       SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for PARDISO CHOLESKY with %s format",((PetscObject)A)->type_name);
1313     }
1314     mat_mkl_pardiso->needsym = PETSC_TRUE;
1315 #if defined(PETSC_USE_COMPLEX)
1316     mat_mkl_pardiso->schur_solver_type = 0; /* use a general solver for the moment */
1317     mat_mkl_pardiso->mtype = 13;
1318 #else
1319     if (A->spd_set && A->spd) {
1320       mat_mkl_pardiso->schur_solver_type = 1;
1321       mat_mkl_pardiso->mtype = 2;
1322     } else {
1323       mat_mkl_pardiso->schur_solver_type = 2;
1324       mat_mkl_pardiso->mtype = -2;
1325     }
1326 #endif
1327   }
1328   mat_mkl_pardiso->Destroy = B->ops->destroy;
1329   B->ops->destroy          = MatDestroy_MKL_PARDISO;
1330   B->ops->view             = MatView_MKL_PARDISO;
1331   B->factortype            = ftype;
1332   B->ops->getinfo          = MatGetInfo_MKL_PARDISO;
1333   B->assembled             = PETSC_TRUE;
1334 
1335   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverPackage_C",MatFactorGetSolverPackage_mkl_pardiso);CHKERRQ(ierr);
1336   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MKL_PARDISO);CHKERRQ(ierr);
1337   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MKL_PARDISO);CHKERRQ(ierr);
1338   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSchurComplement_C",MatFactorGetSchurComplement_MKL_PARDISO);CHKERRQ(ierr);
1339   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorInvertSchurComplement_C",MatFactorInvertSchurComplement_MKL_PARDISO);CHKERRQ(ierr);
1340   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSolveSchurComplement_C",MatFactorSolveSchurComplement_MKL_PARDISO);CHKERRQ(ierr);
1341   ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSolveSchurComplementTranspose_C",MatFactorSolveSchurComplementTranspose_MKL_PARDISO);CHKERRQ(ierr);
1342   ierr = PetscObjectComposeFunction((PetscObject)B,"MatMkl_PardisoSetCntl_C",MatMkl_PardisoSetCntl_MKL_PARDISO);CHKERRQ(ierr);
1343 
1344   *F = B;
1345   PetscFunctionReturn(0);
1346 }
1347 
1348 #undef __FUNCT__
1349 #define __FUNCT__ "MatSolverPackageRegister_MKL_Pardiso"
1350 PETSC_EXTERN PetscErrorCode MatSolverPackageRegister_MKL_Pardiso(void)
1351 {
1352   PetscErrorCode ierr;
1353 
1354   PetscFunctionBegin;
1355   ierr = MatSolverPackageRegister(MATSOLVERMKL_PARDISO,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mkl_pardiso);CHKERRQ(ierr);
1356   ierr = MatSolverPackageRegister(MATSOLVERMKL_PARDISO,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mkl_pardiso);CHKERRQ(ierr);
1357   ierr = MatSolverPackageRegister(MATSOLVERMKL_PARDISO,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mkl_pardiso);CHKERRQ(ierr);
1358   PetscFunctionReturn(0);
1359 }
1360 
1361