1 #if defined(PETSC_HAVE_LIBMKL_INTEL_ILP64) 2 #define MKL_ILP64 3 #endif 4 5 #include <../src/mat/impls/aij/seq/aij.h> /*I "petscmat.h" I*/ 6 #include <../src/mat/impls/sbaij/seq/sbaij.h> 7 #include <../src/mat/impls/dense/seq/dense.h> 8 #include <petscblaslapack.h> 9 10 #include <stdio.h> 11 #include <stdlib.h> 12 #include <math.h> 13 #include <mkl.h> 14 15 /* 16 * Possible mkl_pardiso phases that controls the execution of the solver. 17 * For more information check mkl_pardiso manual. 18 */ 19 #define JOB_ANALYSIS 11 20 #define JOB_ANALYSIS_NUMERICAL_FACTORIZATION 12 21 #define JOB_ANALYSIS_NUMERICAL_FACTORIZATION_SOLVE_ITERATIVE_REFINEMENT 13 22 #define JOB_NUMERICAL_FACTORIZATION 22 23 #define JOB_NUMERICAL_FACTORIZATION_SOLVE_ITERATIVE_REFINEMENT 23 24 #define JOB_SOLVE_ITERATIVE_REFINEMENT 33 25 #define JOB_SOLVE_FORWARD_SUBSTITUTION 331 26 #define JOB_SOLVE_DIAGONAL_SUBSTITUTION 332 27 #define JOB_SOLVE_BACKWARD_SUBSTITUTION 333 28 #define JOB_RELEASE_OF_LU_MEMORY 0 29 #define JOB_RELEASE_OF_ALL_MEMORY -1 30 31 #define IPARM_SIZE 64 32 33 #if defined(PETSC_USE_64BIT_INDICES) 34 #if defined(PETSC_HAVE_LIBMKL_INTEL_ILP64) 35 /* sizeof(MKL_INT) == sizeof(long long int) if ilp64*/ 36 #define INT_TYPE long long int 37 #define MKL_PARDISO pardiso 38 #define MKL_PARDISO_INIT pardisoinit 39 #else 40 #define INT_TYPE long long int 41 #define MKL_PARDISO pardiso_64 42 #define MKL_PARDISO_INIT pardiso_64init 43 #endif 44 #else 45 #define INT_TYPE int 46 #define MKL_PARDISO pardiso 47 #define MKL_PARDISO_INIT pardisoinit 48 #endif 49 50 51 /* 52 * Internal data structure. 53 * For more information check mkl_pardiso manual. 54 */ 55 typedef struct { 56 57 /* Configuration vector*/ 58 INT_TYPE iparm[IPARM_SIZE]; 59 60 /* 61 * Internal mkl_pardiso memory location. 62 * After the first call to mkl_pardiso do not modify pt, as that could cause a serious memory leak. 63 */ 64 void *pt[IPARM_SIZE]; 65 66 /* Basic mkl_pardiso info*/ 67 INT_TYPE phase, maxfct, mnum, mtype, n, nrhs, msglvl, err; 68 69 /* Matrix structure*/ 70 void *a; 71 INT_TYPE *ia, *ja; 72 73 /* Number of non-zero elements*/ 74 INT_TYPE nz; 75 76 /* Row permutaton vector*/ 77 INT_TYPE *perm; 78 79 /* Define if matrix preserves sparse structure.*/ 80 MatStructure matstruc; 81 82 PetscBool needsym; 83 PetscBool freeaij; 84 85 /* Schur complement */ 86 PetscScalar *schur; 87 PetscInt schur_size; 88 PetscInt *schur_idxs; 89 PetscScalar *schur_work; 90 PetscBLASInt schur_work_size; 91 PetscInt schur_solver_type; 92 PetscInt *schur_pivots; 93 PetscBool schur_factored; 94 PetscBool schur_inverted; 95 96 /* True if mkl_pardiso function have been used.*/ 97 PetscBool CleanUp; 98 99 /* Conversion to a format suitable for MKL */ 100 PetscErrorCode (*Convert)(Mat, PetscBool, MatReuse, INT_TYPE*, INT_TYPE**, INT_TYPE**, void**); 101 PetscErrorCode (*Destroy)(Mat); 102 } Mat_MKL_PARDISO; 103 104 #undef __FUNCT__ 105 #define __FUNCT__ "MatMKLPardiso_Convert_seqsbaij" 106 PetscErrorCode MatMKLPardiso_Convert_seqsbaij(Mat A,PetscBool sym,MatReuse reuse,INT_TYPE *nnz,INT_TYPE **r,INT_TYPE **c,void **v) 107 { 108 Mat_SeqSBAIJ *aa=(Mat_SeqSBAIJ*)A->data; 109 PetscFunctionBegin; 110 if (reuse == MAT_INITIAL_MATRIX) { 111 } else { 112 } 113 PetscFunctionReturn(0); 114 } 115 116 #undef __FUNCT__ 117 #define __FUNCT__ "MatMKLPardiso_Convert_seqbaij" 118 PetscErrorCode MatMKLPardiso_Convert_seqbaij(Mat A,PetscBool sym,MatReuse reuse,INT_TYPE *nnz,INT_TYPE **r,INT_TYPE **c,void **v) 119 { 120 Mat_SeqBAIJ *aa=(Mat_SeqBAIJ*)A->data; 121 PetscFunctionBegin; 122 if (reuse == MAT_INITIAL_MATRIX) { 123 } else { 124 } 125 PetscFunctionReturn(0); 126 } 127 128 #undef __FUNCT__ 129 #define __FUNCT__ "MatMKLPardiso_Convert_seqaij" 130 PetscErrorCode MatMKLPardiso_Convert_seqaij(Mat A,PetscBool sym,MatReuse reuse,INT_TYPE *nnz,INT_TYPE **r,INT_TYPE **c,void **v) 131 { 132 Mat_SeqAIJ *aa = (Mat_SeqAIJ*)A->data; 133 PetscErrorCode ierr; 134 135 PetscFunctionBegin; 136 if (!sym) { /* already in the correct format */ 137 *v = aa->a; 138 *r = aa->i; 139 *c = aa->j; 140 *nnz = aa->nz; 141 PetscFunctionReturn(0); 142 } 143 /* need to get the triangular part */ 144 if (reuse == MAT_INITIAL_MATRIX) { 145 PetscScalar *vals,*vv; 146 PetscInt *row,*col,*jj; 147 PetscInt m = A->rmap->n,nz,i; 148 149 nz = 0; 150 for (i=0; i<m; i++) { 151 nz += aa->i[i+1] - aa->diag[i]; 152 } 153 ierr = PetscMalloc2(m+1,&row,nz,&col);CHKERRQ(ierr); 154 ierr = PetscMalloc1(nz,&vals);CHKERRQ(ierr); 155 jj = col; 156 vv = vals; 157 158 row[0] = 0; 159 for (i=0; i<m; i++) { 160 PetscInt *aj = aa->j + aa->diag[i]; 161 PetscScalar *av = aa->a + aa->diag[i]; 162 PetscInt rl = aa->i[i+1] - aa->diag[i],j; 163 for (j=0; j<rl; j++) { 164 *jj = *aj; jj++; aj++; 165 *vv = *av; vv++; av++; 166 } 167 row[i+1] = row[i] + rl; 168 } 169 *v = vals; 170 *r = row; 171 *c = col; 172 *nnz = nz; 173 } else { 174 PetscScalar *vv; 175 PetscInt m = A->rmap->n,i; 176 177 vv = *v; 178 for (i=0; i<m; i++) { 179 PetscInt *aj = aa->j + aa->diag[i]; 180 PetscScalar *av = aa->a + aa->diag[i]; 181 PetscInt rl = aa->i[i+1] - aa->diag[i],j; 182 for (j=0; j<rl; j++) { 183 *vv = *av; vv++; av++; 184 } 185 } 186 } 187 PetscFunctionReturn(0); 188 } 189 190 void pardiso_64init(void *pt, INT_TYPE *mtype, INT_TYPE iparm []) 191 { 192 int iparm_copy[IPARM_SIZE], mtype_copy, i; 193 194 mtype_copy = *mtype; 195 pardisoinit(pt, &mtype_copy, iparm_copy); 196 for(i = 0; i < IPARM_SIZE; i++){ 197 iparm[i] = iparm_copy[i]; 198 } 199 } 200 201 #undef __FUNCT__ 202 #define __FUNCT__ "MatMKLPardisoFactorSchur_Private" 203 static PetscErrorCode MatMKLPardisoFactorSchur_Private(Mat_MKL_PARDISO* mpardiso) 204 { 205 PetscBLASInt B_N,B_ierr; 206 PetscErrorCode ierr; 207 208 PetscFunctionBegin; 209 if (mpardiso->schur_factored) { 210 PetscFunctionReturn(0); 211 } 212 ierr = PetscBLASIntCast(mpardiso->schur_size,&B_N);CHKERRQ(ierr); 213 switch (mpardiso->schur_solver_type) { 214 case 1: /* symmetric */ 215 if (!mpardiso->schur_pivots) { 216 ierr = PetscMalloc1(B_N,&mpardiso->schur_pivots);CHKERRQ(ierr); 217 } 218 ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr); 219 PetscStackCallBLAS("LAPACKsytrf",LAPACKsytrf_("L",&B_N,mpardiso->schur,&B_N,mpardiso->schur_pivots,mpardiso->schur_work,&mpardiso->schur_work_size,&B_ierr)); 220 ierr = PetscFPTrapPop();CHKERRQ(ierr); 221 if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in SYTRF Lapack routine %d",(int)B_ierr); 222 break; 223 case 2: /* hermitian solver */ 224 ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr); 225 PetscStackCallBLAS("LAPACKpotrf",LAPACKpotrf_("L",&B_N,mpardiso->schur,&B_N,&B_ierr)); 226 ierr = PetscFPTrapPop();CHKERRQ(ierr); 227 if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in POTRF Lapack routine %d",(int)B_ierr); 228 break; 229 default: /* general */ 230 if (!mpardiso->schur_pivots) { 231 ierr = PetscMalloc1(B_N,&mpardiso->schur_pivots);CHKERRQ(ierr); 232 } 233 ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr); 234 PetscStackCallBLAS("LAPACKgetrf",LAPACKgetrf_(&B_N,&B_N,mpardiso->schur,&B_N,mpardiso->schur_pivots,&B_ierr)); 235 ierr = PetscFPTrapPop();CHKERRQ(ierr); 236 if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in GETRF Lapack routine %d",(int)B_ierr); 237 break; 238 } 239 mpardiso->schur_factored = PETSC_TRUE; 240 PetscFunctionReturn(0); 241 } 242 243 #undef __FUNCT__ 244 #define __FUNCT__ "MatMKLPardisoInvertSchur_Private" 245 static PetscErrorCode MatMKLPardisoInvertSchur_Private(Mat_MKL_PARDISO* mpardiso) 246 { 247 PetscBLASInt B_N,B_ierr; 248 PetscErrorCode ierr; 249 250 PetscFunctionBegin; 251 ierr = MatMKLPardisoFactorSchur_Private(mpardiso);CHKERRQ(ierr); 252 ierr = PetscBLASIntCast(mpardiso->schur_size,&B_N);CHKERRQ(ierr); 253 switch (mpardiso->schur_solver_type) { 254 case 1: /* symmetric */ 255 ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr); 256 PetscStackCallBLAS("LAPACKsytri",LAPACKsytri_("L",&B_N,mpardiso->schur,&B_N,mpardiso->schur_pivots,mpardiso->schur_work,&B_ierr)); 257 ierr = PetscFPTrapPop();CHKERRQ(ierr); 258 if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in SYTRI Lapack routine %d",(int)B_ierr); 259 break; 260 case 2: /* hermitian solver */ 261 ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr); 262 PetscStackCallBLAS("LAPACKpotri",LAPACKpotri_("L",&B_N,mpardiso->schur,&B_N,&B_ierr)); 263 ierr = PetscFPTrapPop();CHKERRQ(ierr); 264 if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in POTRI Lapack routine %d",(int)B_ierr); 265 break; 266 default: /* general */ 267 ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr); 268 PetscStackCallBLAS("LAPACKgetri",LAPACKgetri_(&B_N,mpardiso->schur,&B_N,mpardiso->schur_pivots,mpardiso->schur_work,&mpardiso->schur_work_size,&B_ierr)); 269 ierr = PetscFPTrapPop();CHKERRQ(ierr); 270 if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in GETRI Lapack routine %d",(int)B_ierr); 271 break; 272 } 273 mpardiso->schur_inverted = PETSC_TRUE; 274 PetscFunctionReturn(0); 275 } 276 277 #undef __FUNCT__ 278 #define __FUNCT__ "MatMKLPardisoSolveSchur_Private" 279 static PetscErrorCode MatMKLPardisoSolveSchur_Private(Mat_MKL_PARDISO* mpardiso, PetscScalar *B, PetscScalar *X) 280 { 281 PetscScalar one=1.,zero=0.,*schur_rhs,*schur_sol; 282 PetscBLASInt B_N,B_Nrhs,B_ierr; 283 char type[2]; 284 PetscErrorCode ierr; 285 286 PetscFunctionBegin; 287 ierr = MatMKLPardisoFactorSchur_Private(mpardiso);CHKERRQ(ierr); 288 ierr = PetscBLASIntCast(mpardiso->schur_size,&B_N);CHKERRQ(ierr); 289 ierr = PetscBLASIntCast(mpardiso->nrhs,&B_Nrhs);CHKERRQ(ierr); 290 if (X == B && mpardiso->schur_inverted) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"X and B cannot point to the same address"); 291 if (X != B) { /* using LAPACK *TRS subroutines */ 292 ierr = PetscMemcpy(X,B,B_N*B_Nrhs*sizeof(PetscScalar));CHKERRQ(ierr); 293 } 294 schur_rhs = B; 295 schur_sol = X; 296 switch (mpardiso->schur_solver_type) { 297 case 1: /* symmetric solver */ 298 if (mpardiso->schur_inverted) { 299 PetscStackCallBLAS("BLASsymm",BLASsymm_("L","L",&B_N,&B_Nrhs,&one,mpardiso->schur,&B_N,schur_rhs,&B_N,&zero,schur_sol,&B_N)); 300 } else { 301 ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr); 302 PetscStackCallBLAS("LAPACKsytrs",LAPACKsytrs_("L",&B_N,&B_Nrhs,mpardiso->schur,&B_N,mpardiso->schur_pivots,schur_sol,&B_N,&B_ierr)); 303 ierr = PetscFPTrapPop();CHKERRQ(ierr); 304 if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in SYTRS Lapack routine %d",(int)B_ierr); 305 } 306 break; 307 case 2: /* hermitian solver */ 308 if (mpardiso->schur_inverted) { /* BLAShemm should go here */ 309 PetscStackCallBLAS("BLASsymm",BLASsymm_("L","L",&B_N,&B_Nrhs,&one,mpardiso->schur,&B_N,schur_rhs,&B_N,&zero,schur_sol,&B_N)); 310 } else { 311 ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr); 312 PetscStackCallBLAS("LAPACKpotrs",LAPACKpotrs_("L",&B_N,&B_Nrhs,mpardiso->schur,&B_N,schur_sol,&B_N,&B_ierr)); 313 ierr = PetscFPTrapPop();CHKERRQ(ierr); 314 if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in POTRS Lapack routine %d",(int)B_ierr); 315 } 316 break; 317 default: /* general */ 318 switch (mpardiso->iparm[12-1]) { 319 case 1: 320 sprintf(type,"C"); 321 break; 322 case 2: 323 sprintf(type,"T"); 324 break; 325 default: 326 sprintf(type,"N"); 327 break; 328 } 329 if (mpardiso->schur_inverted) { 330 PetscStackCallBLAS("BLASgemm",BLASgemm_(type,"N",&B_N,&B_Nrhs,&B_N,&one,mpardiso->schur,&B_N,schur_rhs,&B_N,&zero,schur_sol,&B_N)); 331 } else { 332 ierr = PetscFPTrapPush(PETSC_FP_TRAP_OFF);CHKERRQ(ierr); 333 PetscStackCallBLAS("LAPACKgetrs",LAPACKgetrs_(type,&B_N,&B_Nrhs,mpardiso->schur,&B_N,mpardiso->schur_pivots,schur_sol,&B_N,&B_ierr)); 334 ierr = PetscFPTrapPop();CHKERRQ(ierr); 335 if (B_ierr) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error in GETRS Lapack routine %d",(int)B_ierr); 336 } 337 break; 338 } 339 PetscFunctionReturn(0); 340 } 341 342 343 #undef __FUNCT__ 344 #define __FUNCT__ "MatFactorSetSchurIS_MKL_PARDISO" 345 PetscErrorCode MatFactorSetSchurIS_MKL_PARDISO(Mat F, IS is) 346 { 347 Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr; 348 const PetscInt *idxs; 349 PetscInt size,i; 350 PetscMPIInt csize; 351 PetscErrorCode ierr; 352 353 PetscFunctionBegin; 354 ierr = MPI_Comm_size(PetscObjectComm((PetscObject)F),&csize);CHKERRQ(ierr); 355 if (csize > 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MKL_PARDISO parallel Schur complements not yet supported from PETSc\n"); 356 ierr = ISGetLocalSize(is,&size);CHKERRQ(ierr); 357 if (mpardiso->schur_size != size) { 358 mpardiso->schur_size = size; 359 ierr = PetscFree2(mpardiso->schur,mpardiso->schur_work);CHKERRQ(ierr); 360 ierr = PetscFree(mpardiso->schur_idxs);CHKERRQ(ierr); 361 ierr = PetscFree(mpardiso->schur_pivots);CHKERRQ(ierr); 362 ierr = PetscBLASIntCast(PetscMax(mpardiso->n,2*size),&mpardiso->schur_work_size);CHKERRQ(ierr); 363 ierr = PetscMalloc2(size*size,&mpardiso->schur,mpardiso->schur_work_size,&mpardiso->schur_work);CHKERRQ(ierr); 364 ierr = PetscMalloc1(size,&mpardiso->schur_idxs);CHKERRQ(ierr); 365 } 366 ierr = PetscMemzero(mpardiso->perm,mpardiso->n*sizeof(INT_TYPE));CHKERRQ(ierr); 367 ierr = ISGetIndices(is,&idxs);CHKERRQ(ierr); 368 ierr = PetscMemcpy(mpardiso->schur_idxs,idxs,size*sizeof(PetscInt));CHKERRQ(ierr); 369 for (i=0;i<size;i++) mpardiso->perm[idxs[i]] = 1; 370 ierr = ISRestoreIndices(is,&idxs);CHKERRQ(ierr); 371 if (size) { /* turn on Schur switch if we the set of indices is not empty */ 372 mpardiso->iparm[36-1] = 2; 373 } 374 mpardiso->schur_factored = PETSC_FALSE; 375 mpardiso->schur_inverted = PETSC_FALSE; 376 PetscFunctionReturn(0); 377 } 378 379 #undef __FUNCT__ 380 #define __FUNCT__ "MatFactorCreateSchurComplement_MKL_PARDISO" 381 PetscErrorCode MatFactorCreateSchurComplement_MKL_PARDISO(Mat F,Mat* S) 382 { 383 Mat St; 384 Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr; 385 PetscScalar *array; 386 PetscErrorCode ierr; 387 388 PetscFunctionBegin; 389 if (!mpardiso->iparm[36-1]) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it"); 390 else if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before"); 391 392 ierr = MatCreate(PetscObjectComm((PetscObject)F),&St);CHKERRQ(ierr); 393 ierr = MatSetSizes(St,PETSC_DECIDE,PETSC_DECIDE,mpardiso->schur_size,mpardiso->schur_size);CHKERRQ(ierr); 394 ierr = MatSetType(St,MATDENSE);CHKERRQ(ierr); 395 ierr = MatSetUp(St);CHKERRQ(ierr); 396 ierr = MatDenseGetArray(St,&array);CHKERRQ(ierr); 397 ierr = PetscMemcpy(array,mpardiso->schur,mpardiso->schur_size*mpardiso->schur_size*sizeof(PetscScalar));CHKERRQ(ierr); 398 ierr = MatDenseRestoreArray(St,&array);CHKERRQ(ierr); 399 *S = St; 400 PetscFunctionReturn(0); 401 } 402 403 #undef __FUNCT__ 404 #define __FUNCT__ "MatFactorGetSchurComplement_MKL_PARDISO" 405 PetscErrorCode MatFactorGetSchurComplement_MKL_PARDISO(Mat F,Mat* S) 406 { 407 Mat St; 408 Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr; 409 PetscErrorCode ierr; 410 411 PetscFunctionBegin; 412 if (!mpardiso->iparm[36-1]) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it"); 413 else if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before"); 414 415 ierr = MatCreateSeqDense(PetscObjectComm((PetscObject)F),mpardiso->schur_size,mpardiso->schur_size,mpardiso->schur,&St);CHKERRQ(ierr); 416 *S = St; 417 PetscFunctionReturn(0); 418 } 419 420 #undef __FUNCT__ 421 #define __FUNCT__ "MatFactorInvertSchurComplement_MKL_PARDISO" 422 PetscErrorCode MatFactorInvertSchurComplement_MKL_PARDISO(Mat F) 423 { 424 Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr; 425 PetscErrorCode ierr; 426 427 PetscFunctionBegin; 428 if (!mpardiso->iparm[36-1]) { /* do nothing */ 429 PetscFunctionReturn(0); 430 } 431 if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before"); 432 ierr = MatMKLPardisoInvertSchur_Private(mpardiso);CHKERRQ(ierr); 433 PetscFunctionReturn(0); 434 } 435 436 #undef __FUNCT__ 437 #define __FUNCT__ "MatFactorSolveSchurComplement_MKL_PARDISO" 438 PetscErrorCode MatFactorSolveSchurComplement_MKL_PARDISO(Mat F, Vec rhs, Vec sol) 439 { 440 Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr; 441 PetscScalar *asol,*arhs; 442 PetscErrorCode ierr; 443 444 PetscFunctionBegin; 445 if (!mpardiso->iparm[36-1]) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it"); 446 else if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before"); 447 448 mpardiso->nrhs = 1; 449 ierr = VecGetArrayRead(rhs,(const PetscScalar**)&arhs);CHKERRQ(ierr); 450 ierr = VecGetArray(sol,&asol);CHKERRQ(ierr); 451 ierr = MatMKLPardisoSolveSchur_Private(mpardiso,arhs,asol);CHKERRQ(ierr); 452 ierr = VecRestoreArrayRead(rhs,(const PetscScalar**)&arhs);CHKERRQ(ierr); 453 ierr = VecRestoreArray(sol,&asol);CHKERRQ(ierr); 454 PetscFunctionReturn(0); 455 } 456 457 #undef __FUNCT__ 458 #define __FUNCT__ "MatFactorSolveSchurComplementTranspose_MKL_PARDISO" 459 PetscErrorCode MatFactorSolveSchurComplementTranspose_MKL_PARDISO(Mat F, Vec rhs, Vec sol) 460 { 461 Mat_MKL_PARDISO *mpardiso =(Mat_MKL_PARDISO*)F->spptr; 462 PetscScalar *asol,*arhs; 463 PetscErrorCode ierr; 464 465 PetscFunctionBegin; 466 if (!mpardiso->iparm[36-1]) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur complement mode not selected! You should call MatFactorSetSchurIS to enable it"); 467 else if (!mpardiso->schur_size) SETERRQ(PetscObjectComm((PetscObject)F),PETSC_ERR_ORDER,"Schur indices not set! You should call MatFactorSetSchurIS before"); 468 469 mpardiso->nrhs = 1; 470 ierr = VecGetArrayRead(rhs,(const PetscScalar**)&arhs);CHKERRQ(ierr); 471 ierr = VecGetArray(sol,&asol);CHKERRQ(ierr); 472 mpardiso->iparm[12 - 1] = 2; 473 ierr = MatMKLPardisoSolveSchur_Private(mpardiso,arhs,asol);CHKERRQ(ierr); 474 mpardiso->iparm[12 - 1] = 0; 475 ierr = VecRestoreArrayRead(rhs,(const PetscScalar**)&arhs);CHKERRQ(ierr); 476 ierr = VecRestoreArray(sol,&asol);CHKERRQ(ierr); 477 PetscFunctionReturn(0); 478 } 479 480 #undef __FUNCT__ 481 #define __FUNCT__ "MatDestroy_MKL_PARDISO" 482 PetscErrorCode MatDestroy_MKL_PARDISO(Mat A) 483 { 484 Mat_MKL_PARDISO *mat_mkl_pardiso=(Mat_MKL_PARDISO*)A->spptr; 485 PetscErrorCode ierr; 486 487 PetscFunctionBegin; 488 if (mat_mkl_pardiso->CleanUp) { 489 mat_mkl_pardiso->phase = JOB_RELEASE_OF_ALL_MEMORY; 490 491 MKL_PARDISO (mat_mkl_pardiso->pt, 492 &mat_mkl_pardiso->maxfct, 493 &mat_mkl_pardiso->mnum, 494 &mat_mkl_pardiso->mtype, 495 &mat_mkl_pardiso->phase, 496 &mat_mkl_pardiso->n, 497 NULL, 498 NULL, 499 NULL, 500 mat_mkl_pardiso->perm, 501 &mat_mkl_pardiso->nrhs, 502 mat_mkl_pardiso->iparm, 503 &mat_mkl_pardiso->msglvl, 504 NULL, 505 NULL, 506 &mat_mkl_pardiso->err); 507 } 508 ierr = PetscFree(mat_mkl_pardiso->perm);CHKERRQ(ierr); 509 ierr = PetscFree2(mat_mkl_pardiso->schur,mat_mkl_pardiso->schur_work);CHKERRQ(ierr); 510 ierr = PetscFree(mat_mkl_pardiso->schur_idxs);CHKERRQ(ierr); 511 ierr = PetscFree(mat_mkl_pardiso->schur_pivots);CHKERRQ(ierr); 512 if (mat_mkl_pardiso->freeaij) { 513 ierr = PetscFree2(mat_mkl_pardiso->ia,mat_mkl_pardiso->ja);CHKERRQ(ierr); 514 ierr = PetscFree(mat_mkl_pardiso->a);CHKERRQ(ierr); 515 } 516 if (mat_mkl_pardiso->Destroy) { 517 ierr = (mat_mkl_pardiso->Destroy)(A);CHKERRQ(ierr); 518 } 519 ierr = PetscFree(A->spptr);CHKERRQ(ierr); 520 521 /* clear composed functions */ 522 ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverPackage_C",NULL);CHKERRQ(ierr); 523 ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSetSchurIS_C",NULL);CHKERRQ(ierr); 524 ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorCreateSchurComplement_C",NULL);CHKERRQ(ierr); 525 ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSchurComplement_C",NULL);CHKERRQ(ierr); 526 ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorInvertSchurComplement_C",NULL);CHKERRQ(ierr); 527 ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSolveSchurComplement_C",NULL);CHKERRQ(ierr); 528 ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorSolveSchurComplementTranspose_C",NULL);CHKERRQ(ierr); 529 ierr = PetscObjectComposeFunction((PetscObject)A,"MatMkl_PardisoSetCntl_C",NULL);CHKERRQ(ierr); 530 PetscFunctionReturn(0); 531 } 532 533 #undef __FUNCT__ 534 #define __FUNCT__ "MatMKLPardisoScatterSchur_Private" 535 static PetscErrorCode MatMKLPardisoScatterSchur_Private(Mat_MKL_PARDISO *mpardiso, PetscScalar *whole, PetscScalar *schur, PetscBool reduce) 536 { 537 PetscFunctionBegin; 538 539 if (reduce) { /* data given for the whole matrix */ 540 PetscInt i,m=0,p=0; 541 for (i=0;i<mpardiso->nrhs;i++) { 542 PetscInt j; 543 for (j=0;j<mpardiso->schur_size;j++) { 544 schur[p+j] = whole[m+mpardiso->schur_idxs[j]]; 545 } 546 m += mpardiso->n; 547 p += mpardiso->schur_size; 548 } 549 } else { /* from Schur to whole */ 550 PetscInt i,m=0,p=0; 551 for (i=0;i<mpardiso->nrhs;i++) { 552 PetscInt j; 553 for (j=0;j<mpardiso->schur_size;j++) { 554 whole[m+mpardiso->schur_idxs[j]] = schur[p+j]; 555 } 556 m += mpardiso->n; 557 p += mpardiso->schur_size; 558 } 559 } 560 PetscFunctionReturn(0); 561 } 562 563 #undef __FUNCT__ 564 #define __FUNCT__ "MatSolve_MKL_PARDISO" 565 PetscErrorCode MatSolve_MKL_PARDISO(Mat A,Vec b,Vec x) 566 { 567 Mat_MKL_PARDISO *mat_mkl_pardiso=(Mat_MKL_PARDISO*)(A)->spptr; 568 PetscErrorCode ierr; 569 PetscScalar *xarray; 570 const PetscScalar *barray; 571 572 PetscFunctionBegin; 573 mat_mkl_pardiso->nrhs = 1; 574 ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 575 ierr = VecGetArrayRead(b,&barray);CHKERRQ(ierr); 576 577 if (!mat_mkl_pardiso->schur) { 578 mat_mkl_pardiso->phase = JOB_SOLVE_ITERATIVE_REFINEMENT; 579 } else { 580 mat_mkl_pardiso->phase = JOB_SOLVE_FORWARD_SUBSTITUTION; 581 } 582 mat_mkl_pardiso->iparm[6-1] = 0; 583 MKL_PARDISO (mat_mkl_pardiso->pt, 584 &mat_mkl_pardiso->maxfct, 585 &mat_mkl_pardiso->mnum, 586 &mat_mkl_pardiso->mtype, 587 &mat_mkl_pardiso->phase, 588 &mat_mkl_pardiso->n, 589 mat_mkl_pardiso->a, 590 mat_mkl_pardiso->ia, 591 mat_mkl_pardiso->ja, 592 mat_mkl_pardiso->perm, 593 &mat_mkl_pardiso->nrhs, 594 mat_mkl_pardiso->iparm, 595 &mat_mkl_pardiso->msglvl, 596 (void*)barray, 597 (void*)xarray, 598 &mat_mkl_pardiso->err); 599 600 if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err); 601 602 if (mat_mkl_pardiso->schur) { /* solve Schur complement and expand solution */ 603 PetscInt shift = mat_mkl_pardiso->schur_size; 604 605 /* if inverted, uses BLAS *MM subroutines, otherwise LAPACK *TRS */ 606 if (!mat_mkl_pardiso->schur_inverted) { 607 shift = 0; 608 } 609 610 /* solve Schur complement */ 611 ierr = MatMKLPardisoScatterSchur_Private(mat_mkl_pardiso,xarray,mat_mkl_pardiso->schur_work,PETSC_TRUE);CHKERRQ(ierr); 612 ierr = MatMKLPardisoSolveSchur_Private(mat_mkl_pardiso,mat_mkl_pardiso->schur_work,mat_mkl_pardiso->schur_work+shift);CHKERRQ(ierr); 613 ierr = MatMKLPardisoScatterSchur_Private(mat_mkl_pardiso,xarray,mat_mkl_pardiso->schur_work+shift,PETSC_FALSE);CHKERRQ(ierr); 614 615 /* expansion phase */ 616 mat_mkl_pardiso->iparm[6-1] = 1; 617 mat_mkl_pardiso->phase = JOB_SOLVE_BACKWARD_SUBSTITUTION; 618 MKL_PARDISO (mat_mkl_pardiso->pt, 619 &mat_mkl_pardiso->maxfct, 620 &mat_mkl_pardiso->mnum, 621 &mat_mkl_pardiso->mtype, 622 &mat_mkl_pardiso->phase, 623 &mat_mkl_pardiso->n, 624 mat_mkl_pardiso->a, 625 mat_mkl_pardiso->ia, 626 mat_mkl_pardiso->ja, 627 mat_mkl_pardiso->perm, 628 &mat_mkl_pardiso->nrhs, 629 mat_mkl_pardiso->iparm, 630 &mat_mkl_pardiso->msglvl, 631 (void*)xarray, 632 (void*)mat_mkl_pardiso->schur_work, /* according to the specs, the solution vector is always used */ 633 &mat_mkl_pardiso->err); 634 635 if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err); 636 mat_mkl_pardiso->iparm[6-1] = 0; 637 } 638 ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 639 ierr = VecRestoreArrayRead(b,&barray);CHKERRQ(ierr); 640 mat_mkl_pardiso->CleanUp = PETSC_TRUE; 641 PetscFunctionReturn(0); 642 } 643 644 #undef __FUNCT__ 645 #define __FUNCT__ "MatSolveTranspose_MKL_PARDISO" 646 PetscErrorCode MatSolveTranspose_MKL_PARDISO(Mat A,Vec b,Vec x) 647 { 648 Mat_MKL_PARDISO *mat_mkl_pardiso=(Mat_MKL_PARDISO*)A->spptr; 649 PetscErrorCode ierr; 650 651 PetscFunctionBegin; 652 #if defined(PETSC_USE_COMPLEX) 653 mat_mkl_pardiso->iparm[12 - 1] = 1; 654 #else 655 mat_mkl_pardiso->iparm[12 - 1] = 2; 656 #endif 657 ierr = MatSolve_MKL_PARDISO(A,b,x);CHKERRQ(ierr); 658 mat_mkl_pardiso->iparm[12 - 1] = 0; 659 PetscFunctionReturn(0); 660 } 661 662 #undef __FUNCT__ 663 #define __FUNCT__ "MatMatSolve_MKL_PARDISO" 664 PetscErrorCode MatMatSolve_MKL_PARDISO(Mat A,Mat B,Mat X) 665 { 666 Mat_MKL_PARDISO *mat_mkl_pardiso=(Mat_MKL_PARDISO*)(A)->spptr; 667 PetscErrorCode ierr; 668 PetscScalar *barray, *xarray; 669 PetscBool flg; 670 671 PetscFunctionBegin; 672 ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQDENSE,&flg);CHKERRQ(ierr); 673 if (!flg) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONG,"Matrix B must be MATSEQDENSE matrix"); 674 ierr = PetscObjectTypeCompare((PetscObject)X,MATSEQDENSE,&flg);CHKERRQ(ierr); 675 if (!flg) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONG,"Matrix X must be MATSEQDENSE matrix"); 676 677 ierr = MatGetSize(B,NULL,(PetscInt*)&mat_mkl_pardiso->nrhs);CHKERRQ(ierr); 678 679 if(mat_mkl_pardiso->nrhs > 0){ 680 ierr = MatDenseGetArray(B,&barray); 681 ierr = MatDenseGetArray(X,&xarray); 682 683 if (!mat_mkl_pardiso->schur) { 684 mat_mkl_pardiso->phase = JOB_SOLVE_ITERATIVE_REFINEMENT; 685 } else { 686 mat_mkl_pardiso->phase = JOB_SOLVE_FORWARD_SUBSTITUTION; 687 } 688 mat_mkl_pardiso->iparm[6-1] = 0; 689 MKL_PARDISO (mat_mkl_pardiso->pt, 690 &mat_mkl_pardiso->maxfct, 691 &mat_mkl_pardiso->mnum, 692 &mat_mkl_pardiso->mtype, 693 &mat_mkl_pardiso->phase, 694 &mat_mkl_pardiso->n, 695 mat_mkl_pardiso->a, 696 mat_mkl_pardiso->ia, 697 mat_mkl_pardiso->ja, 698 mat_mkl_pardiso->perm, 699 &mat_mkl_pardiso->nrhs, 700 mat_mkl_pardiso->iparm, 701 &mat_mkl_pardiso->msglvl, 702 (void*)barray, 703 (void*)xarray, 704 &mat_mkl_pardiso->err); 705 if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err); 706 707 if (mat_mkl_pardiso->schur) { /* solve Schur complement and expand solution */ 708 PetscScalar *o_schur_work = NULL; 709 PetscInt shift = mat_mkl_pardiso->schur_size*mat_mkl_pardiso->nrhs,scale; 710 PetscInt mem = mat_mkl_pardiso->n*mat_mkl_pardiso->nrhs; 711 712 /* allocate extra memory if it is needed */ 713 scale = 1; 714 if (mat_mkl_pardiso->schur_inverted) { 715 scale = 2; 716 } 717 mem *= scale; 718 if (mem > mat_mkl_pardiso->schur_work_size) { 719 o_schur_work = mat_mkl_pardiso->schur_work; 720 ierr = PetscMalloc1(mem,&mat_mkl_pardiso->schur_work);CHKERRQ(ierr); 721 } 722 723 /* if inverted, uses BLAS *MM subroutines, otherwise LAPACK *TRS */ 724 if (!mat_mkl_pardiso->schur_inverted) { 725 shift = 0; 726 } 727 728 /* solve Schur complement */ 729 ierr = MatMKLPardisoScatterSchur_Private(mat_mkl_pardiso,xarray,mat_mkl_pardiso->schur_work,PETSC_TRUE);CHKERRQ(ierr); 730 ierr = MatMKLPardisoSolveSchur_Private(mat_mkl_pardiso,mat_mkl_pardiso->schur_work,mat_mkl_pardiso->schur_work+shift);CHKERRQ(ierr); 731 ierr = MatMKLPardisoScatterSchur_Private(mat_mkl_pardiso,xarray,mat_mkl_pardiso->schur_work+shift,PETSC_FALSE);CHKERRQ(ierr); 732 733 /* expansion phase */ 734 mat_mkl_pardiso->iparm[6-1] = 1; 735 mat_mkl_pardiso->phase = JOB_SOLVE_BACKWARD_SUBSTITUTION; 736 MKL_PARDISO (mat_mkl_pardiso->pt, 737 &mat_mkl_pardiso->maxfct, 738 &mat_mkl_pardiso->mnum, 739 &mat_mkl_pardiso->mtype, 740 &mat_mkl_pardiso->phase, 741 &mat_mkl_pardiso->n, 742 mat_mkl_pardiso->a, 743 mat_mkl_pardiso->ia, 744 mat_mkl_pardiso->ja, 745 mat_mkl_pardiso->perm, 746 &mat_mkl_pardiso->nrhs, 747 mat_mkl_pardiso->iparm, 748 &mat_mkl_pardiso->msglvl, 749 (void*)xarray, 750 (void*)mat_mkl_pardiso->schur_work, /* according to the specs, the solution vector is always used */ 751 &mat_mkl_pardiso->err); 752 if (o_schur_work) { /* restore original schur_work (minimal size) */ 753 ierr = PetscFree(mat_mkl_pardiso->schur_work);CHKERRQ(ierr); 754 mat_mkl_pardiso->schur_work = o_schur_work; 755 } 756 if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err); 757 mat_mkl_pardiso->iparm[6-1] = 0; 758 } 759 } 760 mat_mkl_pardiso->CleanUp = PETSC_TRUE; 761 PetscFunctionReturn(0); 762 } 763 764 #undef __FUNCT__ 765 #define __FUNCT__ "MatFactorNumeric_MKL_PARDISO" 766 PetscErrorCode MatFactorNumeric_MKL_PARDISO(Mat F,Mat A,const MatFactorInfo *info) 767 { 768 Mat_MKL_PARDISO *mat_mkl_pardiso=(Mat_MKL_PARDISO*)(F)->spptr; 769 PetscErrorCode ierr; 770 771 PetscFunctionBegin; 772 mat_mkl_pardiso->matstruc = SAME_NONZERO_PATTERN; 773 ierr = (*mat_mkl_pardiso->Convert)(A,mat_mkl_pardiso->needsym,MAT_REUSE_MATRIX,&mat_mkl_pardiso->nz,&mat_mkl_pardiso->ia,&mat_mkl_pardiso->ja,&mat_mkl_pardiso->a);CHKERRQ(ierr); 774 775 mat_mkl_pardiso->phase = JOB_NUMERICAL_FACTORIZATION; 776 MKL_PARDISO (mat_mkl_pardiso->pt, 777 &mat_mkl_pardiso->maxfct, 778 &mat_mkl_pardiso->mnum, 779 &mat_mkl_pardiso->mtype, 780 &mat_mkl_pardiso->phase, 781 &mat_mkl_pardiso->n, 782 mat_mkl_pardiso->a, 783 mat_mkl_pardiso->ia, 784 mat_mkl_pardiso->ja, 785 mat_mkl_pardiso->perm, 786 &mat_mkl_pardiso->nrhs, 787 mat_mkl_pardiso->iparm, 788 &mat_mkl_pardiso->msglvl, 789 NULL, 790 (void*)mat_mkl_pardiso->schur, 791 &mat_mkl_pardiso->err); 792 if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d. Please check manual\n",mat_mkl_pardiso->err); 793 794 if (mat_mkl_pardiso->schur) { /* schur output from pardiso is in row major format */ 795 PetscInt j,k,n=mat_mkl_pardiso->schur_size; 796 for (j=0; j<n; j++) { 797 for (k=0; k<j; k++) { 798 PetscScalar tmp = mat_mkl_pardiso->schur[j + k*n]; 799 mat_mkl_pardiso->schur[j + k*n] = mat_mkl_pardiso->schur[k + j*n]; 800 mat_mkl_pardiso->schur[k + j*n] = tmp; 801 } 802 } 803 } 804 mat_mkl_pardiso->matstruc = SAME_NONZERO_PATTERN; 805 mat_mkl_pardiso->CleanUp = PETSC_TRUE; 806 mat_mkl_pardiso->schur_factored = PETSC_FALSE; 807 mat_mkl_pardiso->schur_inverted = PETSC_FALSE; 808 mat_mkl_pardiso->schur_solver_type = 0; 809 PetscFunctionReturn(0); 810 } 811 812 #undef __FUNCT__ 813 #define __FUNCT__ "PetscSetMKL_PARDISOFromOptions" 814 PetscErrorCode PetscSetMKL_PARDISOFromOptions(Mat F, Mat A) 815 { 816 Mat_MKL_PARDISO *mat_mkl_pardiso = (Mat_MKL_PARDISO*)F->spptr; 817 PetscErrorCode ierr; 818 PetscInt icntl; 819 PetscBool flg; 820 int pt[IPARM_SIZE], threads = 1; 821 822 PetscFunctionBegin; 823 ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"MKL_PARDISO Options","Mat");CHKERRQ(ierr); 824 ierr = PetscOptionsInt("-mat_mkl_pardiso_65","Number of threads to use","None",threads,&threads,&flg);CHKERRQ(ierr); 825 if (flg) mkl_set_num_threads(threads); 826 827 ierr = PetscOptionsInt("-mat_mkl_pardiso_66","Maximum number of factors with identical sparsity structure that must be kept in memory at the same time","None",mat_mkl_pardiso->maxfct,&icntl,&flg);CHKERRQ(ierr); 828 if (flg) mat_mkl_pardiso->maxfct = icntl; 829 830 ierr = PetscOptionsInt("-mat_mkl_pardiso_67","Indicates the actual matrix for the solution phase","None",mat_mkl_pardiso->mnum,&icntl,&flg);CHKERRQ(ierr); 831 if (flg) mat_mkl_pardiso->mnum = icntl; 832 833 ierr = PetscOptionsInt("-mat_mkl_pardiso_68","Message level information","None",mat_mkl_pardiso->msglvl,&icntl,&flg);CHKERRQ(ierr); 834 if (flg) mat_mkl_pardiso->msglvl = icntl; 835 836 ierr = PetscOptionsInt("-mat_mkl_pardiso_69","Defines the matrix type","None",mat_mkl_pardiso->mtype,&icntl,&flg);CHKERRQ(ierr); 837 if(flg){ 838 mat_mkl_pardiso->mtype = icntl; 839 MKL_PARDISO_INIT(&pt, &mat_mkl_pardiso->mtype, mat_mkl_pardiso->iparm); 840 #if defined(PETSC_USE_REAL_SINGLE) 841 mat_mkl_pardiso->iparm[27] = 1; 842 #else 843 mat_mkl_pardiso->iparm[27] = 0; 844 #endif 845 mat_mkl_pardiso->iparm[34] = 1; 846 } 847 ierr = PetscOptionsInt("-mat_mkl_pardiso_1","Use default values","None",mat_mkl_pardiso->iparm[0],&icntl,&flg);CHKERRQ(ierr); 848 849 if(flg && icntl != 0){ 850 ierr = PetscOptionsInt("-mat_mkl_pardiso_2","Fill-in reducing ordering for the input matrix","None",mat_mkl_pardiso->iparm[1],&icntl,&flg);CHKERRQ(ierr); 851 if (flg) mat_mkl_pardiso->iparm[1] = icntl; 852 853 ierr = PetscOptionsInt("-mat_mkl_pardiso_4","Preconditioned CGS/CG","None",mat_mkl_pardiso->iparm[3],&icntl,&flg);CHKERRQ(ierr); 854 if (flg) mat_mkl_pardiso->iparm[3] = icntl; 855 856 ierr = PetscOptionsInt("-mat_mkl_pardiso_5","User permutation","None",mat_mkl_pardiso->iparm[4],&icntl,&flg);CHKERRQ(ierr); 857 if (flg) mat_mkl_pardiso->iparm[4] = icntl; 858 859 ierr = PetscOptionsInt("-mat_mkl_pardiso_6","Write solution on x","None",mat_mkl_pardiso->iparm[5],&icntl,&flg);CHKERRQ(ierr); 860 if (flg) mat_mkl_pardiso->iparm[5] = icntl; 861 862 ierr = PetscOptionsInt("-mat_mkl_pardiso_8","Iterative refinement step","None",mat_mkl_pardiso->iparm[7],&icntl,&flg);CHKERRQ(ierr); 863 if (flg) mat_mkl_pardiso->iparm[7] = icntl; 864 865 ierr = PetscOptionsInt("-mat_mkl_pardiso_10","Pivoting perturbation","None",mat_mkl_pardiso->iparm[9],&icntl,&flg);CHKERRQ(ierr); 866 if (flg) mat_mkl_pardiso->iparm[9] = icntl; 867 868 ierr = PetscOptionsInt("-mat_mkl_pardiso_11","Scaling vectors","None",mat_mkl_pardiso->iparm[10],&icntl,&flg);CHKERRQ(ierr); 869 if (flg) mat_mkl_pardiso->iparm[10] = icntl; 870 871 ierr = PetscOptionsInt("-mat_mkl_pardiso_12","Solve with transposed or conjugate transposed matrix A","None",mat_mkl_pardiso->iparm[11],&icntl,&flg);CHKERRQ(ierr); 872 if (flg) mat_mkl_pardiso->iparm[11] = icntl; 873 874 ierr = PetscOptionsInt("-mat_mkl_pardiso_13","Improved accuracy using (non-) symmetric weighted matching","None",mat_mkl_pardiso->iparm[12],&icntl,&flg);CHKERRQ(ierr); 875 if (flg) mat_mkl_pardiso->iparm[12] = icntl; 876 877 ierr = PetscOptionsInt("-mat_mkl_pardiso_18","Numbers of non-zero elements","None",mat_mkl_pardiso->iparm[17],&icntl,&flg);CHKERRQ(ierr); 878 if (flg) mat_mkl_pardiso->iparm[17] = icntl; 879 880 ierr = PetscOptionsInt("-mat_mkl_pardiso_19","Report number of floating point operations","None",mat_mkl_pardiso->iparm[18],&icntl,&flg);CHKERRQ(ierr); 881 if (flg) mat_mkl_pardiso->iparm[18] = icntl; 882 883 ierr = PetscOptionsInt("-mat_mkl_pardiso_21","Pivoting for symmetric indefinite matrices","None",mat_mkl_pardiso->iparm[20],&icntl,&flg);CHKERRQ(ierr); 884 if (flg) mat_mkl_pardiso->iparm[20] = icntl; 885 886 ierr = PetscOptionsInt("-mat_mkl_pardiso_24","Parallel factorization control","None",mat_mkl_pardiso->iparm[23],&icntl,&flg);CHKERRQ(ierr); 887 if (flg) mat_mkl_pardiso->iparm[23] = icntl; 888 889 ierr = PetscOptionsInt("-mat_mkl_pardiso_25","Parallel forward/backward solve control","None",mat_mkl_pardiso->iparm[24],&icntl,&flg);CHKERRQ(ierr); 890 if (flg) mat_mkl_pardiso->iparm[24] = icntl; 891 892 ierr = PetscOptionsInt("-mat_mkl_pardiso_27","Matrix checker","None",mat_mkl_pardiso->iparm[26],&icntl,&flg);CHKERRQ(ierr); 893 if (flg) mat_mkl_pardiso->iparm[26] = icntl; 894 895 ierr = PetscOptionsInt("-mat_mkl_pardiso_31","Partial solve and computing selected components of the solution vectors","None",mat_mkl_pardiso->iparm[30],&icntl,&flg);CHKERRQ(ierr); 896 if (flg) mat_mkl_pardiso->iparm[30] = icntl; 897 898 ierr = PetscOptionsInt("-mat_mkl_pardiso_34","Optimal number of threads for conditional numerical reproducibility (CNR) mode","None",mat_mkl_pardiso->iparm[33],&icntl,&flg);CHKERRQ(ierr); 899 if (flg) mat_mkl_pardiso->iparm[33] = icntl; 900 901 ierr = PetscOptionsInt("-mat_mkl_pardiso_60","Intel MKL_PARDISO mode","None",mat_mkl_pardiso->iparm[59],&icntl,&flg);CHKERRQ(ierr); 902 if (flg) mat_mkl_pardiso->iparm[59] = icntl; 903 } 904 PetscOptionsEnd(); 905 PetscFunctionReturn(0); 906 } 907 908 #undef __FUNCT__ 909 #define __FUNCT__ "MatFactorMKL_PARDISOInitialize_Private" 910 PetscErrorCode MatFactorMKL_PARDISOInitialize_Private(Mat A, MatFactorType ftype, Mat_MKL_PARDISO *mat_mkl_pardiso) 911 { 912 PetscErrorCode ierr; 913 PetscInt i; 914 915 PetscFunctionBegin; 916 for ( i = 0; i < IPARM_SIZE; i++ ){ 917 mat_mkl_pardiso->iparm[i] = 0; 918 } 919 for ( i = 0; i < IPARM_SIZE; i++ ){ 920 mat_mkl_pardiso->pt[i] = 0; 921 } 922 /* Default options for both sym and unsym */ 923 mat_mkl_pardiso->iparm[ 0] = 1; /* Solver default parameters overriden with provided by iparm */ 924 mat_mkl_pardiso->iparm[ 1] = 2; /* Metis reordering */ 925 mat_mkl_pardiso->iparm[ 5] = 0; /* Write solution into x */ 926 mat_mkl_pardiso->iparm[ 7] = 0; /* Max number of iterative refinement steps */ 927 mat_mkl_pardiso->iparm[17] = -1; /* Output: Number of nonzeros in the factor LU */ 928 mat_mkl_pardiso->iparm[18] = -1; /* Output: Mflops for LU factorization */ 929 #if 0 930 mat_mkl_pardiso->iparm[23] = 1; /* Parallel factorization control*/ 931 #endif 932 mat_mkl_pardiso->iparm[34] = 1; /* Cluster Sparse Solver use C-style indexing for ia and ja arrays */ 933 mat_mkl_pardiso->iparm[39] = 0; /* Input: matrix/rhs/solution stored on master */ 934 935 mat_mkl_pardiso->CleanUp = PETSC_FALSE; 936 mat_mkl_pardiso->maxfct = 1; /* Maximum number of numerical factorizations. */ 937 mat_mkl_pardiso->mnum = 1; /* Which factorization to use. */ 938 mat_mkl_pardiso->msglvl = 0; /* 0: do not print 1: Print statistical information in file */ 939 mat_mkl_pardiso->phase = -1; 940 mat_mkl_pardiso->err = 0; 941 942 mat_mkl_pardiso->n = A->rmap->N; 943 mat_mkl_pardiso->nrhs = 1; 944 mat_mkl_pardiso->err = 0; 945 mat_mkl_pardiso->phase = -1; 946 947 if(ftype == MAT_FACTOR_LU){ 948 mat_mkl_pardiso->iparm[ 9] = 13; /* Perturb the pivot elements with 1E-13 */ 949 mat_mkl_pardiso->iparm[10] = 1; /* Use nonsymmetric permutation and scaling MPS */ 950 mat_mkl_pardiso->iparm[12] = 1; /* Switch on Maximum Weighted Matching algorithm (default for non-symmetric) */ 951 952 } else { 953 mat_mkl_pardiso->iparm[ 9] = 13; /* Perturb the pivot elements with 1E-13 */ 954 mat_mkl_pardiso->iparm[10] = 0; /* Use nonsymmetric permutation and scaling MPS */ 955 mat_mkl_pardiso->iparm[12] = 1; /* Switch on Maximum Weighted Matching algorithm (default for non-symmetric) */ 956 /* mat_mkl_pardiso->iparm[20] = 1; */ /* Apply 1x1 and 2x2 Bunch-Kaufman pivoting during the factorization process */ 957 #if defined(PETSC_USE_DEBUG) 958 mat_mkl_pardiso->iparm[26] = 1; /* Matrix checker */ 959 #endif 960 } 961 ierr = PetscMalloc1(A->rmap->N*sizeof(INT_TYPE), &mat_mkl_pardiso->perm);CHKERRQ(ierr); 962 for(i = 0; i < A->rmap->N; i++){ 963 mat_mkl_pardiso->perm[i] = 0; 964 } 965 mat_mkl_pardiso->schur_size = 0; 966 PetscFunctionReturn(0); 967 } 968 969 #undef __FUNCT__ 970 #define __FUNCT__ "MatFactorSymbolic_AIJMKL_PARDISO_Private" 971 PetscErrorCode MatFactorSymbolic_AIJMKL_PARDISO_Private(Mat F,Mat A,const MatFactorInfo *info) 972 { 973 Mat_MKL_PARDISO *mat_mkl_pardiso = (Mat_MKL_PARDISO*)F->spptr; 974 PetscErrorCode ierr; 975 976 PetscFunctionBegin; 977 mat_mkl_pardiso->matstruc = DIFFERENT_NONZERO_PATTERN; 978 ierr = PetscSetMKL_PARDISOFromOptions(F,A);CHKERRQ(ierr); 979 980 if (mat_mkl_pardiso->freeaij) { 981 ierr = PetscFree2(mat_mkl_pardiso->ia,mat_mkl_pardiso->ja);CHKERRQ(ierr); 982 ierr = PetscFree(mat_mkl_pardiso->a);CHKERRQ(ierr); 983 } 984 ierr = (*mat_mkl_pardiso->Convert)(A,mat_mkl_pardiso->needsym,MAT_INITIAL_MATRIX,&mat_mkl_pardiso->nz,&mat_mkl_pardiso->ia,&mat_mkl_pardiso->ja,&mat_mkl_pardiso->a);CHKERRQ(ierr); 985 mat_mkl_pardiso->n = A->rmap->N; 986 987 mat_mkl_pardiso->phase = JOB_ANALYSIS; 988 989 MKL_PARDISO (mat_mkl_pardiso->pt, 990 &mat_mkl_pardiso->maxfct, 991 &mat_mkl_pardiso->mnum, 992 &mat_mkl_pardiso->mtype, 993 &mat_mkl_pardiso->phase, 994 &mat_mkl_pardiso->n, 995 mat_mkl_pardiso->a, 996 mat_mkl_pardiso->ia, 997 mat_mkl_pardiso->ja, 998 mat_mkl_pardiso->perm, 999 &mat_mkl_pardiso->nrhs, 1000 mat_mkl_pardiso->iparm, 1001 &mat_mkl_pardiso->msglvl, 1002 NULL, 1003 NULL, 1004 &mat_mkl_pardiso->err); 1005 if (mat_mkl_pardiso->err < 0) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"Error reported by MKL_PARDISO: err=%d\n. Please check manual",mat_mkl_pardiso->err); 1006 1007 mat_mkl_pardiso->CleanUp = PETSC_TRUE; 1008 1009 if (F->factortype == MAT_FACTOR_LU) { 1010 F->ops->lufactornumeric = MatFactorNumeric_MKL_PARDISO; 1011 } else { 1012 F->ops->choleskyfactornumeric = MatFactorNumeric_MKL_PARDISO; 1013 } 1014 F->ops->solve = MatSolve_MKL_PARDISO; 1015 F->ops->solvetranspose = MatSolveTranspose_MKL_PARDISO; 1016 F->ops->matsolve = MatMatSolve_MKL_PARDISO; 1017 PetscFunctionReturn(0); 1018 } 1019 1020 #undef __FUNCT__ 1021 #define __FUNCT__ "MatLUFactorSymbolic_AIJMKL_PARDISO" 1022 PetscErrorCode MatLUFactorSymbolic_AIJMKL_PARDISO(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 1023 { 1024 PetscErrorCode ierr; 1025 1026 PetscFunctionBegin; 1027 ierr = MatFactorSymbolic_AIJMKL_PARDISO_Private(F, A, info);CHKERRQ(ierr); 1028 PetscFunctionReturn(0); 1029 } 1030 1031 #undef __FUNCT__ 1032 #define __FUNCT__ "MatCholeskyFactorSymbolic_AIJMKL_PARDISO" 1033 PetscErrorCode MatCholeskyFactorSymbolic_AIJMKL_PARDISO(Mat F,Mat A,IS r,const MatFactorInfo *info) 1034 { 1035 PetscErrorCode ierr; 1036 1037 PetscFunctionBegin; 1038 ierr = MatFactorSymbolic_AIJMKL_PARDISO_Private(F, A, info);CHKERRQ(ierr); 1039 PetscFunctionReturn(0); 1040 } 1041 1042 #undef __FUNCT__ 1043 #define __FUNCT__ "MatView_MKL_PARDISO" 1044 PetscErrorCode MatView_MKL_PARDISO(Mat A, PetscViewer viewer) 1045 { 1046 PetscErrorCode ierr; 1047 PetscBool iascii; 1048 PetscViewerFormat format; 1049 Mat_MKL_PARDISO *mat_mkl_pardiso=(Mat_MKL_PARDISO*)A->spptr; 1050 PetscInt i; 1051 1052 PetscFunctionBegin; 1053 if (A->ops->solve != MatSolve_MKL_PARDISO) PetscFunctionReturn(0); 1054 1055 ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 1056 if (iascii) { 1057 ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 1058 if (format == PETSC_VIEWER_ASCII_INFO) { 1059 ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO run parameters:\n");CHKERRQ(ierr); 1060 ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO phase: %d \n",mat_mkl_pardiso->phase);CHKERRQ(ierr); 1061 for(i = 1; i <= 64; i++){ 1062 ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO iparm[%d]: %d \n",i, mat_mkl_pardiso->iparm[i - 1]);CHKERRQ(ierr); 1063 } 1064 ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO maxfct: %d \n", mat_mkl_pardiso->maxfct);CHKERRQ(ierr); 1065 ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO mnum: %d \n", mat_mkl_pardiso->mnum);CHKERRQ(ierr); 1066 ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO mtype: %d \n", mat_mkl_pardiso->mtype);CHKERRQ(ierr); 1067 ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO n: %d \n", mat_mkl_pardiso->n);CHKERRQ(ierr); 1068 ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO nrhs: %d \n", mat_mkl_pardiso->nrhs);CHKERRQ(ierr); 1069 ierr = PetscViewerASCIIPrintf(viewer,"MKL_PARDISO msglvl: %d \n", mat_mkl_pardiso->msglvl);CHKERRQ(ierr); 1070 } 1071 } 1072 PetscFunctionReturn(0); 1073 } 1074 1075 1076 #undef __FUNCT__ 1077 #define __FUNCT__ "MatGetInfo_MKL_PARDISO" 1078 PetscErrorCode MatGetInfo_MKL_PARDISO(Mat A, MatInfoType flag, MatInfo *info) 1079 { 1080 Mat_MKL_PARDISO *mat_mkl_pardiso =(Mat_MKL_PARDISO*)A->spptr; 1081 1082 PetscFunctionBegin; 1083 info->block_size = 1.0; 1084 info->nz_allocated = mat_mkl_pardiso->nz + 0.0; 1085 info->nz_unneeded = 0.0; 1086 info->assemblies = 0.0; 1087 info->mallocs = 0.0; 1088 info->memory = 0.0; 1089 info->fill_ratio_given = 0; 1090 info->fill_ratio_needed = 0; 1091 info->factor_mallocs = 0; 1092 PetscFunctionReturn(0); 1093 } 1094 1095 #undef __FUNCT__ 1096 #define __FUNCT__ "MatMkl_PardisoSetCntl_MKL_PARDISO" 1097 PetscErrorCode MatMkl_PardisoSetCntl_MKL_PARDISO(Mat F,PetscInt icntl,PetscInt ival) 1098 { 1099 Mat_MKL_PARDISO *mat_mkl_pardiso =(Mat_MKL_PARDISO*)F->spptr; 1100 1101 PetscFunctionBegin; 1102 if(icntl <= 64){ 1103 mat_mkl_pardiso->iparm[icntl - 1] = ival; 1104 } else { 1105 if(icntl == 65) 1106 mkl_set_num_threads((int)ival); 1107 else if(icntl == 66) 1108 mat_mkl_pardiso->maxfct = ival; 1109 else if(icntl == 67) 1110 mat_mkl_pardiso->mnum = ival; 1111 else if(icntl == 68) 1112 mat_mkl_pardiso->msglvl = ival; 1113 else if(icntl == 69){ 1114 int pt[IPARM_SIZE]; 1115 mat_mkl_pardiso->mtype = ival; 1116 MKL_PARDISO_INIT(&pt, &mat_mkl_pardiso->mtype, mat_mkl_pardiso->iparm); 1117 #if defined(PETSC_USE_REAL_SINGLE) 1118 mat_mkl_pardiso->iparm[27] = 1; 1119 #else 1120 mat_mkl_pardiso->iparm[27] = 0; 1121 #endif 1122 mat_mkl_pardiso->iparm[34] = 1; 1123 } 1124 } 1125 PetscFunctionReturn(0); 1126 } 1127 1128 #undef __FUNCT__ 1129 #define __FUNCT__ "MatMkl_PardisoSetCntl" 1130 /*@ 1131 MatMkl_PardisoSetCntl - Set Mkl_Pardiso parameters 1132 1133 Logically Collective on Mat 1134 1135 Input Parameters: 1136 + F - the factored matrix obtained by calling MatGetFactor() 1137 . icntl - index of Mkl_Pardiso parameter 1138 - ival - value of Mkl_Pardiso parameter 1139 1140 Options Database: 1141 . -mat_mkl_pardiso_<icntl> <ival> 1142 1143 Level: beginner 1144 1145 References: Mkl_Pardiso Users' Guide 1146 1147 .seealso: MatGetFactor() 1148 @*/ 1149 PetscErrorCode MatMkl_PardisoSetCntl(Mat F,PetscInt icntl,PetscInt ival) 1150 { 1151 PetscErrorCode ierr; 1152 1153 PetscFunctionBegin; 1154 ierr = PetscTryMethod(F,"MatMkl_PardisoSetCntl_C",(Mat,PetscInt,PetscInt),(F,icntl,ival));CHKERRQ(ierr); 1155 PetscFunctionReturn(0); 1156 } 1157 1158 /*MC 1159 MATSOLVERMKL_PARDISO - A matrix type providing direct solvers (LU) for 1160 sequential matrices via the external package MKL_PARDISO. 1161 1162 Works with MATSEQAIJ matrices 1163 1164 Use -pc_type lu -pc_factor_mat_solver_package mkl_pardiso to us this direct solver 1165 1166 Options Database Keys: 1167 + -mat_mkl_pardiso_65 - Number of threads to use 1168 . -mat_mkl_pardiso_66 - Maximum number of factors with identical sparsity structure that must be kept in memory at the same time 1169 . -mat_mkl_pardiso_67 - Indicates the actual matrix for the solution phase 1170 . -mat_mkl_pardiso_68 - Message level information 1171 . -mat_mkl_pardiso_69 - Defines the matrix type. IMPORTANT: When you set this flag, iparm parameters are going to be set to the default ones for the matrix type 1172 . -mat_mkl_pardiso_1 - Use default values 1173 . -mat_mkl_pardiso_2 - Fill-in reducing ordering for the input matrix 1174 . -mat_mkl_pardiso_4 - Preconditioned CGS/CG 1175 . -mat_mkl_pardiso_5 - User permutation 1176 . -mat_mkl_pardiso_6 - Write solution on x 1177 . -mat_mkl_pardiso_8 - Iterative refinement step 1178 . -mat_mkl_pardiso_10 - Pivoting perturbation 1179 . -mat_mkl_pardiso_11 - Scaling vectors 1180 . -mat_mkl_pardiso_12 - Solve with transposed or conjugate transposed matrix A 1181 . -mat_mkl_pardiso_13 - Improved accuracy using (non-) symmetric weighted matching 1182 . -mat_mkl_pardiso_18 - Numbers of non-zero elements 1183 . -mat_mkl_pardiso_19 - Report number of floating point operations 1184 . -mat_mkl_pardiso_21 - Pivoting for symmetric indefinite matrices 1185 . -mat_mkl_pardiso_24 - Parallel factorization control 1186 . -mat_mkl_pardiso_25 - Parallel forward/backward solve control 1187 . -mat_mkl_pardiso_27 - Matrix checker 1188 . -mat_mkl_pardiso_31 - Partial solve and computing selected components of the solution vectors 1189 . -mat_mkl_pardiso_34 - Optimal number of threads for conditional numerical reproducibility (CNR) mode 1190 - -mat_mkl_pardiso_60 - Intel MKL_PARDISO mode 1191 1192 Level: beginner 1193 1194 For more information please check mkl_pardiso manual 1195 1196 .seealso: PCFactorSetMatSolverPackage(), MatSolverPackage 1197 1198 M*/ 1199 #undef __FUNCT__ 1200 #define __FUNCT__ "MatFactorGetSolverPackage_mkl_pardiso" 1201 static PetscErrorCode MatFactorGetSolverPackage_mkl_pardiso(Mat A, const MatSolverPackage *type) 1202 { 1203 PetscFunctionBegin; 1204 *type = MATSOLVERMKL_PARDISO; 1205 PetscFunctionReturn(0); 1206 } 1207 1208 #undef __FUNCT__ 1209 #define __FUNCT__ "MatGetFactor_aij_mkl_pardiso" 1210 PETSC_EXTERN PetscErrorCode MatGetFactor_aij_mkl_pardiso(Mat A,MatFactorType ftype,Mat *F) 1211 { 1212 Mat B; 1213 PetscErrorCode ierr; 1214 Mat_MKL_PARDISO *mat_mkl_pardiso; 1215 PetscBool isSeqAIJ,isSeqBAIJ,isSeqSBAIJ; 1216 1217 PetscFunctionBegin; 1218 ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isSeqAIJ);CHKERRQ(ierr); 1219 ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&isSeqBAIJ);CHKERRQ(ierr); 1220 ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQSBAIJ,&isSeqSBAIJ);CHKERRQ(ierr); 1221 ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 1222 ierr = MatSetSizes(B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 1223 ierr = MatSetType(B,((PetscObject)A)->type_name);CHKERRQ(ierr); 1224 ierr = MatSeqAIJSetPreallocation(B,0,NULL);CHKERRQ(ierr); 1225 ierr = MatSeqBAIJSetPreallocation(B,A->rmap->bs,0,NULL);CHKERRQ(ierr); 1226 ierr = MatSeqSBAIJSetPreallocation(B,A->rmap->bs,0,NULL);CHKERRQ(ierr); 1227 1228 ierr = PetscNewLog(B,&mat_mkl_pardiso);CHKERRQ(ierr); 1229 B->spptr = mat_mkl_pardiso; 1230 1231 ierr = MatFactorMKL_PARDISOInitialize_Private(A, ftype, mat_mkl_pardiso);CHKERRQ(ierr); 1232 if (ftype == MAT_FACTOR_LU) { 1233 B->ops->lufactorsymbolic = MatLUFactorSymbolic_AIJMKL_PARDISO; 1234 B->factortype = MAT_FACTOR_LU; 1235 if (isSeqAIJ) { 1236 mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqaij; 1237 mat_mkl_pardiso->freeaij = PETSC_FALSE; 1238 } else if (isSeqBAIJ) { 1239 mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqbaij; 1240 mat_mkl_pardiso->freeaij = PETSC_TRUE; 1241 } else if (isSeqSBAIJ) { 1242 mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqsbaij; 1243 mat_mkl_pardiso->freeaij = PETSC_TRUE; 1244 } else { 1245 SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for PARDISO LU with %s format",((PetscObject)A)->type_name); 1246 } 1247 #if defined(PETSC_USE_COMPLEX) 1248 mat_mkl_pardiso->schur_solver_type = 0; /* use a general solver for the moment */ 1249 mat_mkl_pardiso->mtype = 13; 1250 #else 1251 if (A->structurally_symmetric) { 1252 mat_mkl_pardiso->mtype = 1; 1253 } else { 1254 mat_mkl_pardiso->mtype = 11; 1255 } 1256 #endif 1257 mat_mkl_pardiso->schur_solver_type = 0; 1258 } else { 1259 B->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_AIJMKL_PARDISO; 1260 B->factortype = MAT_FACTOR_CHOLESKY; 1261 if (isSeqAIJ) { 1262 mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqaij; 1263 mat_mkl_pardiso->freeaij = PETSC_TRUE; 1264 } else if (isSeqBAIJ) { 1265 mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqbaij; 1266 mat_mkl_pardiso->freeaij = PETSC_TRUE; 1267 } else if (isSeqSBAIJ) { 1268 mat_mkl_pardiso->Convert = MatMKLPardiso_Convert_seqsbaij; 1269 mat_mkl_pardiso->freeaij = PETSC_FALSE; 1270 } else { 1271 SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for PARDISO CHOLESKY with %s format",((PetscObject)A)->type_name); 1272 } 1273 mat_mkl_pardiso->needsym = PETSC_TRUE; 1274 #if defined(PETSC_USE_COMPLEX) 1275 mat_mkl_pardiso->schur_solver_type = 0; /* use a general solver for the moment */ 1276 mat_mkl_pardiso->mtype = 13; 1277 #else 1278 if (A->spd_set && A->spd) { 1279 mat_mkl_pardiso->schur_solver_type = 2; 1280 mat_mkl_pardiso->mtype = 2; 1281 } else { 1282 mat_mkl_pardiso->schur_solver_type = 1; 1283 mat_mkl_pardiso->mtype = -2; 1284 } 1285 #endif 1286 } 1287 mat_mkl_pardiso->Destroy = B->ops->destroy; 1288 B->ops->destroy = MatDestroy_MKL_PARDISO; 1289 B->ops->view = MatView_MKL_PARDISO; 1290 B->factortype = ftype; 1291 B->ops->getinfo = MatGetInfo_MKL_PARDISO; 1292 B->assembled = PETSC_TRUE; 1293 1294 ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverPackage_C",MatFactorGetSolverPackage_mkl_pardiso);CHKERRQ(ierr); 1295 ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSetSchurIS_C",MatFactorSetSchurIS_MKL_PARDISO);CHKERRQ(ierr); 1296 ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorCreateSchurComplement_C",MatFactorCreateSchurComplement_MKL_PARDISO);CHKERRQ(ierr); 1297 ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSchurComplement_C",MatFactorGetSchurComplement_MKL_PARDISO);CHKERRQ(ierr); 1298 ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorInvertSchurComplement_C",MatFactorInvertSchurComplement_MKL_PARDISO);CHKERRQ(ierr); 1299 ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSolveSchurComplement_C",MatFactorSolveSchurComplement_MKL_PARDISO);CHKERRQ(ierr); 1300 ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorSolveSchurComplementTranspose_C",MatFactorSolveSchurComplementTranspose_MKL_PARDISO);CHKERRQ(ierr); 1301 ierr = PetscObjectComposeFunction((PetscObject)B,"MatMkl_PardisoSetCntl_C",MatMkl_PardisoSetCntl_MKL_PARDISO);CHKERRQ(ierr); 1302 1303 *F = B; 1304 PetscFunctionReturn(0); 1305 } 1306 1307 #undef __FUNCT__ 1308 #define __FUNCT__ "MatSolverPackageRegister_MKL_Pardiso" 1309 PETSC_EXTERN PetscErrorCode MatSolverPackageRegister_MKL_Pardiso(void) 1310 { 1311 PetscErrorCode ierr; 1312 1313 PetscFunctionBegin; 1314 ierr = MatSolverPackageRegister(MATSOLVERMKL_PARDISO,MATSEQAIJ,MAT_FACTOR_LU,MatGetFactor_aij_mkl_pardiso);CHKERRQ(ierr); 1315 ierr = MatSolverPackageRegister(MATSOLVERMKL_PARDISO,MATSEQAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_aij_mkl_pardiso);CHKERRQ(ierr); 1316 PetscFunctionReturn(0); 1317 } 1318 1319