19ae82921SPaul Mullowney /* 29ae82921SPaul Mullowney Defines the basic matrix operations for the AIJ (compressed row) 3fd7c363cSSatish Balay matrix storage format using the CUSPARSE library, 49ae82921SPaul Mullowney */ 5dced61a5SBarry Smith #define PETSC_SKIP_SPINLOCK 653800007SKarl Rupp #define PETSC_SKIP_CXX_COMPLEX_FIX 799acd6aaSStefano Zampini #define PETSC_SKIP_IMMINTRIN_H_CUDAWORKAROUND 1 89ae82921SPaul Mullowney 93d13b8fdSMatthew G. Knepley #include <petscconf.h> 103d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/aij.h> /*I "petscmat.h" I*/ 11087f3262SPaul Mullowney #include <../src/mat/impls/sbaij/seq/sbaij.h> 123d13b8fdSMatthew G. Knepley #include <../src/vec/vec/impls/dvecimpl.h> 13af0996ceSBarry Smith #include <petsc/private/vecimpl.h> 149ae82921SPaul Mullowney #undef VecType 153d13b8fdSMatthew G. Knepley #include <../src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h> 16bc3f50f2SPaul Mullowney 17e057df02SPaul Mullowney const char *const MatCUSPARSEStorageFormats[] = {"CSR","ELL","HYB","MatCUSPARSEStorageFormat","MAT_CUSPARSE_",0}; 18afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 19afb2bd1cSJunchao Zhang /* The following are copied from cusparse.h in CUDA-11.0. In MatCUSPARSESpMVAlgorithms[] etc, we copy them in 20afb2bd1cSJunchao Zhang 0-based integer value order, since we want to use PetscOptionsEnum() to parse user command line options for them. 21afb2bd1cSJunchao Zhang 22afb2bd1cSJunchao Zhang typedef enum { 23afb2bd1cSJunchao Zhang CUSPARSE_MV_ALG_DEFAULT = 0, 24afb2bd1cSJunchao Zhang CUSPARSE_COOMV_ALG = 1, 25afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG1 = 2, 26afb2bd1cSJunchao Zhang CUSPARSE_CSRMV_ALG2 = 3 27afb2bd1cSJunchao Zhang } cusparseSpMVAlg_t; 28afb2bd1cSJunchao Zhang 29afb2bd1cSJunchao Zhang typedef enum { 30afb2bd1cSJunchao Zhang CUSPARSE_MM_ALG_DEFAULT CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_ALG_DEFAULT) = 0, 31afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG1) = 1, 32afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG2 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG2) = 2, 33afb2bd1cSJunchao Zhang CUSPARSE_COOMM_ALG3 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_COO_ALG3) = 3, 34afb2bd1cSJunchao Zhang CUSPARSE_CSRMM_ALG1 CUSPARSE_DEPRECATED_ENUM(CUSPARSE_SPMM_CSR_ALG1) = 4, 35afb2bd1cSJunchao Zhang CUSPARSE_SPMM_ALG_DEFAULT = 0, 36afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG1 = 1, 37afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG2 = 2, 38afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG3 = 3, 39afb2bd1cSJunchao Zhang CUSPARSE_SPMM_COO_ALG4 = 5, 40afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG1 = 4, 41afb2bd1cSJunchao Zhang CUSPARSE_SPMM_CSR_ALG2 = 6, 42afb2bd1cSJunchao Zhang } cusparseSpMMAlg_t; 43afb2bd1cSJunchao Zhang 44afb2bd1cSJunchao Zhang typedef enum { 45afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1 = 1, // faster than V2 (in general), deterministc 46afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG2 = 2 // low memory requirement, non-deterministc 47afb2bd1cSJunchao Zhang } cusparseCsr2CscAlg_t; 48afb2bd1cSJunchao Zhang */ 49afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMVAlgorithms[] = {"MV_ALG_DEFAULT","COOMV_ALG", "CSRMV_ALG1","CSRMV_ALG2", "cusparseSpMVAlg_t","CUSPARSE_",0}; 50afb2bd1cSJunchao Zhang const char *const MatCUSPARSESpMMAlgorithms[] = {"ALG_DEFAULT","COO_ALG1","COO_ALG2","COO_ALG3","CSR_ALG1","COO_ALG4","CSR_ALG2","cusparseSpMMAlg_t","CUSPARSE_SPMM_",0}; 51afb2bd1cSJunchao Zhang const char *const MatCUSPARSECsr2CscAlgorithms[] = {"INVALID"/*cusparse does not have enum 0! We created one*/,"ALG1","ALG2","cusparseCsr2CscAlg_t","CUSPARSE_CSR2CSC_",0}; 52afb2bd1cSJunchao Zhang #endif 539ae82921SPaul Mullowney 54087f3262SPaul Mullowney static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,const MatFactorInfo*); 55087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,const MatFactorInfo*); 56087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat,Mat,const MatFactorInfo*); 57087f3262SPaul Mullowney 586fa9248bSJed Brown static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,IS,const MatFactorInfo*); 596fa9248bSJed Brown static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat,Mat,IS,IS,const MatFactorInfo*); 606fa9248bSJed Brown static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat,Mat,const MatFactorInfo*); 61087f3262SPaul Mullowney 626fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat,Vec,Vec); 636fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat,Vec,Vec); 646fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 656fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat,Vec,Vec); 664416b707SBarry Smith static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(PetscOptionItems *PetscOptionsObject,Mat); 67a587d139SMark static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat,PetscScalar,Mat,MatStructure); 6833c9ba73SStefano Zampini static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat,PetscScalar); 696fa9248bSJed Brown static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat,Vec,Vec); 706fa9248bSJed Brown static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 716fa9248bSJed Brown static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 726fa9248bSJed Brown static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 73e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat,Vec,Vec); 74e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec); 75e6e9a74fSStefano Zampini static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat,Vec,Vec,Vec,PetscBool,PetscBool); 769ae82921SPaul Mullowney 777f756511SDominic Meiser static PetscErrorCode CsrMatrix_Destroy(CsrMatrix**); 78470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct**); 79470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct**,MatCUSPARSEStorageFormat); 80ccdfe979SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Reset(Mat_SeqAIJCUSPARSETriFactors**); 81470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors**); 82470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE**); 837f756511SDominic Meiser 8457181aedSStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyToGPU(Mat); 8557181aedSStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat); 86*a49f1ed0SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat,PetscBool); 8757181aedSStefano Zampini 887e8381f9SStefano Zampini PETSC_INTERN PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat,PetscInt,const PetscInt[],const PetscInt[]); 897e8381f9SStefano Zampini PETSC_INTERN PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat,const PetscScalar[],InsertMode); 907e8381f9SStefano Zampini 91c215019aSStefano Zampini static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat,PetscInt,const PetscInt[],PetscScalar[]); 92c215019aSStefano Zampini 93b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSESetStream(Mat A,const cudaStream_t stream) 94b06137fdSPaul Mullowney { 95b06137fdSPaul Mullowney cusparseStatus_t stat; 96b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 97b06137fdSPaul Mullowney 98b06137fdSPaul Mullowney PetscFunctionBegin; 99d98d7c49SStefano Zampini if (!cusparsestruct) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing spptr"); 100b06137fdSPaul Mullowney cusparsestruct->stream = stream; 10157d48284SJunchao Zhang stat = cusparseSetStream(cusparsestruct->handle,cusparsestruct->stream);CHKERRCUSPARSE(stat); 102b06137fdSPaul Mullowney PetscFunctionReturn(0); 103b06137fdSPaul Mullowney } 104b06137fdSPaul Mullowney 105b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSESetHandle(Mat A,const cusparseHandle_t handle) 106b06137fdSPaul Mullowney { 107b06137fdSPaul Mullowney cusparseStatus_t stat; 108b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 109b06137fdSPaul Mullowney 110b06137fdSPaul Mullowney PetscFunctionBegin; 111d98d7c49SStefano Zampini if (!cusparsestruct) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing spptr"); 1126b1cf21dSAlejandro Lamas Daviña if (cusparsestruct->handle != handle) { 11316a2e217SAlejandro Lamas Daviña if (cusparsestruct->handle) { 11457d48284SJunchao Zhang stat = cusparseDestroy(cusparsestruct->handle);CHKERRCUSPARSE(stat); 11516a2e217SAlejandro Lamas Daviña } 116b06137fdSPaul Mullowney cusparsestruct->handle = handle; 1176b1cf21dSAlejandro Lamas Daviña } 11857d48284SJunchao Zhang stat = cusparseSetPointerMode(cusparsestruct->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 119b06137fdSPaul Mullowney PetscFunctionReturn(0); 120b06137fdSPaul Mullowney } 121b06137fdSPaul Mullowney 122b06137fdSPaul Mullowney PetscErrorCode MatCUSPARSEClearHandle(Mat A) 123b06137fdSPaul Mullowney { 124b06137fdSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1257e8381f9SStefano Zampini PetscBool flg; 1267e8381f9SStefano Zampini PetscErrorCode ierr; 127ccdfe979SStefano Zampini 128b06137fdSPaul Mullowney PetscFunctionBegin; 1297e8381f9SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 1307e8381f9SStefano Zampini if (!flg || !cusparsestruct) PetscFunctionReturn(0); 131ccdfe979SStefano Zampini if (cusparsestruct->handle) cusparsestruct->handle = 0; 132b06137fdSPaul Mullowney PetscFunctionReturn(0); 133b06137fdSPaul Mullowney } 134b06137fdSPaul Mullowney 135ea799195SBarry Smith PetscErrorCode MatFactorGetSolverType_seqaij_cusparse(Mat A,MatSolverType *type) 1369ae82921SPaul Mullowney { 1379ae82921SPaul Mullowney PetscFunctionBegin; 1389ae82921SPaul Mullowney *type = MATSOLVERCUSPARSE; 1399ae82921SPaul Mullowney PetscFunctionReturn(0); 1409ae82921SPaul Mullowney } 1419ae82921SPaul Mullowney 142c708e6cdSJed Brown /*MC 143087f3262SPaul Mullowney MATSOLVERCUSPARSE = "cusparse" - A matrix type providing triangular solvers for seq matrices 144087f3262SPaul Mullowney on a single GPU of type, seqaijcusparse, aijcusparse, or seqaijcusp, aijcusp. Currently supported 145087f3262SPaul Mullowney algorithms are ILU(k) and ICC(k). Typically, deeper factorizations (larger k) results in poorer 146087f3262SPaul Mullowney performance in the triangular solves. Full LU, and Cholesky decompositions can be solved through the 147087f3262SPaul Mullowney CUSPARSE triangular solve algorithm. However, the performance can be quite poor and thus these 148087f3262SPaul Mullowney algorithms are not recommended. This class does NOT support direct solver operations. 149c708e6cdSJed Brown 1509ae82921SPaul Mullowney Level: beginner 151c708e6cdSJed Brown 1523ca39a21SBarry Smith .seealso: PCFactorSetMatSolverType(), MatSolverType, MatCreateSeqAIJCUSPARSE(), MATAIJCUSPARSE, MatCreateAIJCUSPARSE(), MatCUSPARSESetFormat(), MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 153c708e6cdSJed Brown M*/ 1549ae82921SPaul Mullowney 15542c9c57cSBarry Smith PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse(Mat A,MatFactorType ftype,Mat *B) 1569ae82921SPaul Mullowney { 1579ae82921SPaul Mullowney PetscErrorCode ierr; 158bc3f50f2SPaul Mullowney PetscInt n = A->rmap->n; 1599ae82921SPaul Mullowney 1609ae82921SPaul Mullowney PetscFunctionBegin; 161bc3f50f2SPaul Mullowney ierr = MatCreate(PetscObjectComm((PetscObject)A),B);CHKERRQ(ierr); 162bc3f50f2SPaul Mullowney ierr = MatSetSizes(*B,n,n,n,n);CHKERRQ(ierr); 1632c7c0729SBarry Smith (*B)->factortype = ftype; 1642c7c0729SBarry Smith (*B)->useordering = PETSC_TRUE; 1659ae82921SPaul Mullowney ierr = MatSetType(*B,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 1662205254eSKarl Rupp 167087f3262SPaul Mullowney if (ftype == MAT_FACTOR_LU || ftype == MAT_FACTOR_ILU || ftype == MAT_FACTOR_ILUDT) { 16833d57670SJed Brown ierr = MatSetBlockSizesFromMats(*B,A,A);CHKERRQ(ierr); 1699ae82921SPaul Mullowney (*B)->ops->ilufactorsymbolic = MatILUFactorSymbolic_SeqAIJCUSPARSE; 1709ae82921SPaul Mullowney (*B)->ops->lufactorsymbolic = MatLUFactorSymbolic_SeqAIJCUSPARSE; 171087f3262SPaul Mullowney } else if (ftype == MAT_FACTOR_CHOLESKY || ftype == MAT_FACTOR_ICC) { 172087f3262SPaul Mullowney (*B)->ops->iccfactorsymbolic = MatICCFactorSymbolic_SeqAIJCUSPARSE; 173087f3262SPaul Mullowney (*B)->ops->choleskyfactorsymbolic = MatCholeskyFactorSymbolic_SeqAIJCUSPARSE; 1749ae82921SPaul Mullowney } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Factor type not supported for CUSPARSE Matrix Types"); 175bc3f50f2SPaul Mullowney 176fa03d054SJed Brown ierr = MatSeqAIJSetPreallocation(*B,MAT_SKIP_ALLOCATION,NULL);CHKERRQ(ierr); 1773ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)(*B),"MatFactorGetSolverType_C",MatFactorGetSolverType_seqaij_cusparse);CHKERRQ(ierr); 1789ae82921SPaul Mullowney PetscFunctionReturn(0); 1799ae82921SPaul Mullowney } 1809ae82921SPaul Mullowney 181bc3f50f2SPaul Mullowney PETSC_INTERN PetscErrorCode MatCUSPARSESetFormat_SeqAIJCUSPARSE(Mat A,MatCUSPARSEFormatOperation op,MatCUSPARSEStorageFormat format) 182ca45077fSPaul Mullowney { 183aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1846e111a19SKarl Rupp 185ca45077fSPaul Mullowney PetscFunctionBegin; 186ca45077fSPaul Mullowney switch (op) { 187e057df02SPaul Mullowney case MAT_CUSPARSE_MULT: 188aa372e3fSPaul Mullowney cusparsestruct->format = format; 189ca45077fSPaul Mullowney break; 190e057df02SPaul Mullowney case MAT_CUSPARSE_ALL: 191aa372e3fSPaul Mullowney cusparsestruct->format = format; 192ca45077fSPaul Mullowney break; 193ca45077fSPaul Mullowney default: 19436d62e41SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"unsupported operation %d for MatCUSPARSEFormatOperation. MAT_CUSPARSE_MULT and MAT_CUSPARSE_ALL are currently supported.",op); 195ca45077fSPaul Mullowney } 196ca45077fSPaul Mullowney PetscFunctionReturn(0); 197ca45077fSPaul Mullowney } 1989ae82921SPaul Mullowney 199e057df02SPaul Mullowney /*@ 200e057df02SPaul Mullowney MatCUSPARSESetFormat - Sets the storage format of CUSPARSE matrices for a particular 201e057df02SPaul Mullowney operation. Only the MatMult operation can use different GPU storage formats 202aa372e3fSPaul Mullowney for MPIAIJCUSPARSE matrices. 203e057df02SPaul Mullowney Not Collective 204e057df02SPaul Mullowney 205e057df02SPaul Mullowney Input Parameters: 2068468deeeSKarl Rupp + A - Matrix of type SEQAIJCUSPARSE 20736d62e41SPaul Mullowney . op - MatCUSPARSEFormatOperation. SEQAIJCUSPARSE matrices support MAT_CUSPARSE_MULT and MAT_CUSPARSE_ALL. MPIAIJCUSPARSE matrices support MAT_CUSPARSE_MULT_DIAG, MAT_CUSPARSE_MULT_OFFDIAG, and MAT_CUSPARSE_ALL. 2082692e278SPaul Mullowney - format - MatCUSPARSEStorageFormat (one of MAT_CUSPARSE_CSR, MAT_CUSPARSE_ELL, MAT_CUSPARSE_HYB. The latter two require CUDA 4.2) 209e057df02SPaul Mullowney 210e057df02SPaul Mullowney Output Parameter: 211e057df02SPaul Mullowney 212e057df02SPaul Mullowney Level: intermediate 213e057df02SPaul Mullowney 2148468deeeSKarl Rupp .seealso: MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 215e057df02SPaul Mullowney @*/ 216e057df02SPaul Mullowney PetscErrorCode MatCUSPARSESetFormat(Mat A,MatCUSPARSEFormatOperation op,MatCUSPARSEStorageFormat format) 217e057df02SPaul Mullowney { 218e057df02SPaul Mullowney PetscErrorCode ierr; 2196e111a19SKarl Rupp 220e057df02SPaul Mullowney PetscFunctionBegin; 221e057df02SPaul Mullowney PetscValidHeaderSpecific(A, MAT_CLASSID,1); 222e057df02SPaul Mullowney ierr = PetscTryMethod(A,"MatCUSPARSESetFormat_C",(Mat,MatCUSPARSEFormatOperation,MatCUSPARSEStorageFormat),(A,op,format));CHKERRQ(ierr); 223e057df02SPaul Mullowney PetscFunctionReturn(0); 224e057df02SPaul Mullowney } 225e057df02SPaul Mullowney 226e6e9a74fSStefano Zampini /*@ 227e589036eSStefano Zampini MatSeqAIJCUSPARSESetGenerateTranspose - Sets the flag to explicitly generate the transpose matrix before calling MatMultTranspose 228e6e9a74fSStefano Zampini 229e6e9a74fSStefano Zampini Collective on mat 230e6e9a74fSStefano Zampini 231e6e9a74fSStefano Zampini Input Parameters: 232e6e9a74fSStefano Zampini + A - Matrix of type SEQAIJCUSPARSE 233e6e9a74fSStefano Zampini - transgen - the boolean flag 234e6e9a74fSStefano Zampini 235e6e9a74fSStefano Zampini Level: intermediate 236e6e9a74fSStefano Zampini 237e589036eSStefano Zampini .seealso: MATSEQAIJCUSPARSE, MatAIJCUSPARSESetGenerateTranspose() 238e6e9a74fSStefano Zampini @*/ 239e6e9a74fSStefano Zampini PetscErrorCode MatSeqAIJCUSPARSESetGenerateTranspose(Mat A,PetscBool transgen) 240e6e9a74fSStefano Zampini { 241e6e9a74fSStefano Zampini PetscErrorCode ierr; 242e6e9a74fSStefano Zampini PetscBool flg; 243e6e9a74fSStefano Zampini 244e6e9a74fSStefano Zampini PetscFunctionBegin; 245e6e9a74fSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 246e6e9a74fSStefano Zampini ierr = PetscObjectTypeCompare(((PetscObject)A),MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 247e6e9a74fSStefano Zampini if (flg) { 248e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 24954da937aSStefano Zampini 250e6e9a74fSStefano Zampini if (A->factortype) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONGSTATE,"Not for factored matrix"); 251e6e9a74fSStefano Zampini cusp->transgen = transgen; 25254da937aSStefano Zampini if (!transgen) { /* need to destroy the transpose matrix if present to prevent from logic errors if transgen is set to true later */ 253*a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 25454da937aSStefano Zampini } 255e6e9a74fSStefano Zampini } 256e6e9a74fSStefano Zampini PetscFunctionReturn(0); 257e6e9a74fSStefano Zampini } 258e6e9a74fSStefano Zampini 2594416b707SBarry Smith static PetscErrorCode MatSetFromOptions_SeqAIJCUSPARSE(PetscOptionItems *PetscOptionsObject,Mat A) 2609ae82921SPaul Mullowney { 2619ae82921SPaul Mullowney PetscErrorCode ierr; 262e057df02SPaul Mullowney MatCUSPARSEStorageFormat format; 2639ae82921SPaul Mullowney PetscBool flg; 264a183c035SDominic Meiser Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 2656e111a19SKarl Rupp 2669ae82921SPaul Mullowney PetscFunctionBegin; 267e55864a3SBarry Smith ierr = PetscOptionsHead(PetscOptionsObject,"SeqAIJCUSPARSE options");CHKERRQ(ierr); 2689ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 26954da937aSStefano Zampini PetscBool transgen = cusparsestruct->transgen; 27054da937aSStefano Zampini 27154da937aSStefano Zampini ierr = PetscOptionsBool("-mat_cusparse_transgen","Generate explicit transpose for MatMultTranspose","MatSeqAIJCUSPARSESetGenerateTranspose",transgen,&transgen,&flg);CHKERRQ(ierr); 272afb2bd1cSJunchao Zhang if (flg) {ierr = MatSeqAIJCUSPARSESetGenerateTranspose(A,transgen);CHKERRQ(ierr);} 273afb2bd1cSJunchao Zhang 274e057df02SPaul Mullowney ierr = PetscOptionsEnum("-mat_cusparse_mult_storage_format","sets storage format of (seq)aijcusparse gpu matrices for SpMV", 275a183c035SDominic Meiser "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)cusparsestruct->format,(PetscEnum*)&format,&flg);CHKERRQ(ierr); 276afb2bd1cSJunchao Zhang if (flg) {ierr = MatCUSPARSESetFormat(A,MAT_CUSPARSE_MULT,format);CHKERRQ(ierr);} 277afb2bd1cSJunchao Zhang 2784c87dfd4SPaul Mullowney ierr = PetscOptionsEnum("-mat_cusparse_storage_format","sets storage format of (seq)aijcusparse gpu matrices for SpMV and TriSolve", 279a183c035SDominic Meiser "MatCUSPARSESetFormat",MatCUSPARSEStorageFormats,(PetscEnum)cusparsestruct->format,(PetscEnum*)&format,&flg);CHKERRQ(ierr); 280afb2bd1cSJunchao Zhang if (flg) {ierr = MatCUSPARSESetFormat(A,MAT_CUSPARSE_ALL,format);CHKERRQ(ierr);} 281afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 282afb2bd1cSJunchao Zhang cusparsestruct->spmvAlg = CUSPARSE_CSRMV_ALG1; /* default, since we only support csr */ 283afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_spmv_alg","sets cuSPARSE algorithm used in sparse-mat dense-vector multiplication (SpMV)", 284afb2bd1cSJunchao Zhang "cusparseSpMVAlg_t",MatCUSPARSESpMVAlgorithms,(PetscEnum)cusparsestruct->spmvAlg,(PetscEnum*)&cusparsestruct->spmvAlg,&flg);CHKERRQ(ierr); 285afb2bd1cSJunchao Zhang /* If user did use this option, check its consistency with cuSPARSE, since PetscOptionsEnum() sets enum values based on their position in MatCUSPARSESpMVAlgorithms[] */ 286afb2bd1cSJunchao Zhang if (flg && CUSPARSE_CSRMV_ALG1 != 2) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMVAlg_t has been changed but PETSc has not been updated accordingly"); 287afb2bd1cSJunchao Zhang 288afb2bd1cSJunchao Zhang cusparsestruct->spmmAlg = CUSPARSE_SPMM_CSR_ALG1; /* default, only support column-major dense matrix B */ 289afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_spmm_alg","sets cuSPARSE algorithm used in sparse-mat dense-mat multiplication (SpMM)", 290afb2bd1cSJunchao Zhang "cusparseSpMMAlg_t",MatCUSPARSESpMMAlgorithms,(PetscEnum)cusparsestruct->spmmAlg,(PetscEnum*)&cusparsestruct->spmmAlg,&flg);CHKERRQ(ierr); 291afb2bd1cSJunchao Zhang if (flg && CUSPARSE_SPMM_CSR_ALG1 != 4) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseSpMMAlg_t has been changed but PETSc has not been updated accordingly"); 292afb2bd1cSJunchao Zhang 293afb2bd1cSJunchao Zhang cusparsestruct->csr2cscAlg = CUSPARSE_CSR2CSC_ALG1; 294afb2bd1cSJunchao Zhang ierr = PetscOptionsEnum("-mat_cusparse_csr2csc_alg","sets cuSPARSE algorithm used in converting CSR matrices to CSC matrices", 295afb2bd1cSJunchao Zhang "cusparseCsr2CscAlg_t",MatCUSPARSECsr2CscAlgorithms,(PetscEnum)cusparsestruct->csr2cscAlg,(PetscEnum*)&cusparsestruct->csr2cscAlg,&flg);CHKERRQ(ierr); 296afb2bd1cSJunchao Zhang if (flg && CUSPARSE_CSR2CSC_ALG1 != 1) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE enum cusparseCsr2CscAlg_t has been changed but PETSc has not been updated accordingly"); 297afb2bd1cSJunchao Zhang #endif 2984c87dfd4SPaul Mullowney } 2990af67c1bSStefano Zampini ierr = PetscOptionsTail();CHKERRQ(ierr); 3009ae82921SPaul Mullowney PetscFunctionReturn(0); 3019ae82921SPaul Mullowney } 3029ae82921SPaul Mullowney 3036fa9248bSJed Brown static PetscErrorCode MatILUFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 3049ae82921SPaul Mullowney { 305da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 3069ae82921SPaul Mullowney PetscErrorCode ierr; 3079ae82921SPaul Mullowney 3089ae82921SPaul Mullowney PetscFunctionBegin; 309da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 3109ae82921SPaul Mullowney ierr = MatILUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info);CHKERRQ(ierr); 3119ae82921SPaul Mullowney B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 3129ae82921SPaul Mullowney PetscFunctionReturn(0); 3139ae82921SPaul Mullowney } 3149ae82921SPaul Mullowney 3156fa9248bSJed Brown static PetscErrorCode MatLUFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS isrow,IS iscol,const MatFactorInfo *info) 3169ae82921SPaul Mullowney { 317da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 3189ae82921SPaul Mullowney PetscErrorCode ierr; 3199ae82921SPaul Mullowney 3209ae82921SPaul Mullowney PetscFunctionBegin; 321da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 3229ae82921SPaul Mullowney ierr = MatLUFactorSymbolic_SeqAIJ(B,A,isrow,iscol,info);CHKERRQ(ierr); 3239ae82921SPaul Mullowney B->ops->lufactornumeric = MatLUFactorNumeric_SeqAIJCUSPARSE; 3249ae82921SPaul Mullowney PetscFunctionReturn(0); 3259ae82921SPaul Mullowney } 3269ae82921SPaul Mullowney 327087f3262SPaul Mullowney static PetscErrorCode MatICCFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS perm,const MatFactorInfo *info) 328087f3262SPaul Mullowney { 329da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 330087f3262SPaul Mullowney PetscErrorCode ierr; 331087f3262SPaul Mullowney 332087f3262SPaul Mullowney PetscFunctionBegin; 333da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 334087f3262SPaul Mullowney ierr = MatICCFactorSymbolic_SeqAIJ(B,A,perm,info);CHKERRQ(ierr); 335087f3262SPaul Mullowney B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 336087f3262SPaul Mullowney PetscFunctionReturn(0); 337087f3262SPaul Mullowney } 338087f3262SPaul Mullowney 339087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorSymbolic_SeqAIJCUSPARSE(Mat B,Mat A,IS perm,const MatFactorInfo *info) 340087f3262SPaul Mullowney { 341da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)B->spptr; 342087f3262SPaul Mullowney PetscErrorCode ierr; 343087f3262SPaul Mullowney 344087f3262SPaul Mullowney PetscFunctionBegin; 345da79fbbcSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(&cusparseTriFactors);CHKERRQ(ierr); 346087f3262SPaul Mullowney ierr = MatCholeskyFactorSymbolic_SeqAIJ(B,A,perm,info);CHKERRQ(ierr); 347087f3262SPaul Mullowney B->ops->choleskyfactornumeric = MatCholeskyFactorNumeric_SeqAIJCUSPARSE; 348087f3262SPaul Mullowney PetscFunctionReturn(0); 349087f3262SPaul Mullowney } 350087f3262SPaul Mullowney 351087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildILULowerTriMatrix(Mat A) 3529ae82921SPaul Mullowney { 3539ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3549ae82921SPaul Mullowney PetscInt n = A->rmap->n; 3559ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 356aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 3579ae82921SPaul Mullowney cusparseStatus_t stat; 3589ae82921SPaul Mullowney const PetscInt *ai = a->i,*aj = a->j,*vi; 3599ae82921SPaul Mullowney const MatScalar *aa = a->a,*v; 3609ae82921SPaul Mullowney PetscInt *AiLo, *AjLo; 3619ae82921SPaul Mullowney PetscInt i,nz, nzLower, offset, rowOffset; 362b175d8bbSPaul Mullowney PetscErrorCode ierr; 36357d48284SJunchao Zhang cudaError_t cerr; 3649ae82921SPaul Mullowney 3659ae82921SPaul Mullowney PetscFunctionBegin; 366cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 367c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 3689ae82921SPaul Mullowney try { 3699ae82921SPaul Mullowney /* first figure out the number of nonzeros in the lower triangular matrix including 1's on the diagonal. */ 3709ae82921SPaul Mullowney nzLower=n+ai[n]-ai[1]; 371da79fbbcSStefano Zampini if (!loTriFactor) { 3722cbc15d9SMark PetscScalar *AALo; 3732cbc15d9SMark 3742cbc15d9SMark cerr = cudaMallocHost((void**) &AALo, nzLower*sizeof(PetscScalar));CHKERRCUDA(cerr); 3759ae82921SPaul Mullowney 3769ae82921SPaul Mullowney /* Allocate Space for the lower triangular matrix */ 37757d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiLo, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 37857d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjLo, nzLower*sizeof(PetscInt));CHKERRCUDA(cerr); 3799ae82921SPaul Mullowney 3809ae82921SPaul Mullowney /* Fill the lower triangular matrix */ 3819ae82921SPaul Mullowney AiLo[0] = (PetscInt) 0; 3829ae82921SPaul Mullowney AiLo[n] = nzLower; 3839ae82921SPaul Mullowney AjLo[0] = (PetscInt) 0; 3849ae82921SPaul Mullowney AALo[0] = (MatScalar) 1.0; 3859ae82921SPaul Mullowney v = aa; 3869ae82921SPaul Mullowney vi = aj; 3879ae82921SPaul Mullowney offset = 1; 3889ae82921SPaul Mullowney rowOffset= 1; 3899ae82921SPaul Mullowney for (i=1; i<n; i++) { 3909ae82921SPaul Mullowney nz = ai[i+1] - ai[i]; 391e057df02SPaul Mullowney /* additional 1 for the term on the diagonal */ 3929ae82921SPaul Mullowney AiLo[i] = rowOffset; 3939ae82921SPaul Mullowney rowOffset += nz+1; 3949ae82921SPaul Mullowney 395580bdb30SBarry Smith ierr = PetscArraycpy(&(AjLo[offset]), vi, nz);CHKERRQ(ierr); 396580bdb30SBarry Smith ierr = PetscArraycpy(&(AALo[offset]), v, nz);CHKERRQ(ierr); 3979ae82921SPaul Mullowney 3989ae82921SPaul Mullowney offset += nz; 3999ae82921SPaul Mullowney AjLo[offset] = (PetscInt) i; 4009ae82921SPaul Mullowney AALo[offset] = (MatScalar) 1.0; 4019ae82921SPaul Mullowney offset += 1; 4029ae82921SPaul Mullowney 4039ae82921SPaul Mullowney v += nz; 4049ae82921SPaul Mullowney vi += nz; 4059ae82921SPaul Mullowney } 4062205254eSKarl Rupp 407aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 408da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactor);CHKERRQ(ierr); 409da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 410aa372e3fSPaul Mullowney /* Create the matrix description */ 41157d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactor->descr);CHKERRCUSPARSE(stat); 41257d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4131b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 414afb2bd1cSJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 415afb2bd1cSJunchao Zhang #else 41657d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 417afb2bd1cSJunchao Zhang #endif 41857d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_LOWER);CHKERRCUSPARSE(stat); 41957d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT);CHKERRCUSPARSE(stat); 420aa372e3fSPaul Mullowney 421aa372e3fSPaul Mullowney /* set the operation */ 422aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 423aa372e3fSPaul Mullowney 424aa372e3fSPaul Mullowney /* set the matrix */ 425aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 426aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = n; 427aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = n; 428aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = nzLower; 429aa372e3fSPaul Mullowney 430aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n+1); 431aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiLo, AiLo+n+1); 432aa372e3fSPaul Mullowney 433aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzLower); 434aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjLo, AjLo+nzLower); 435aa372e3fSPaul Mullowney 436aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(nzLower); 437aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo+nzLower); 438aa372e3fSPaul Mullowney 439afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 440da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 441afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 4421b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 443afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactor->solveOp, 444afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 445afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 446afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, 447afb2bd1cSJunchao Zhang &loTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 448afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactor->solveBuffer,loTriFactor->solveBufferSize);CHKERRCUDA(cerr); 449afb2bd1cSJunchao Zhang #endif 450afb2bd1cSJunchao Zhang 451aa372e3fSPaul Mullowney /* perform the solve analysis */ 452aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, 453aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 454aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 455afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo 4561b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 457afb2bd1cSJunchao Zhang ,loTriFactor->solvePolicy, loTriFactor->solveBuffer 458afb2bd1cSJunchao Zhang #endif 459afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 460da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 461da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 462aa372e3fSPaul Mullowney 463da79fbbcSStefano Zampini /* assign the pointer */ 464aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtr = loTriFactor; 4652cbc15d9SMark loTriFactor->AA_h = AALo; 46657d48284SJunchao Zhang cerr = cudaFreeHost(AiLo);CHKERRCUDA(cerr); 46757d48284SJunchao Zhang cerr = cudaFreeHost(AjLo);CHKERRCUDA(cerr); 4684863603aSSatish Balay ierr = PetscLogCpuToGpu((n+1+nzLower)*sizeof(int)+nzLower*sizeof(PetscScalar));CHKERRQ(ierr); 469da79fbbcSStefano Zampini } else { /* update values only */ 4702cbc15d9SMark if (!loTriFactor->AA_h) { 4712cbc15d9SMark cerr = cudaMallocHost((void**) &loTriFactor->AA_h, nzLower*sizeof(PetscScalar));CHKERRCUDA(cerr); 4722cbc15d9SMark } 473da79fbbcSStefano Zampini /* Fill the lower triangular matrix */ 4742cbc15d9SMark loTriFactor->AA_h[0] = 1.0; 475da79fbbcSStefano Zampini v = aa; 476da79fbbcSStefano Zampini vi = aj; 477da79fbbcSStefano Zampini offset = 1; 478da79fbbcSStefano Zampini for (i=1; i<n; i++) { 479da79fbbcSStefano Zampini nz = ai[i+1] - ai[i]; 4802cbc15d9SMark ierr = PetscArraycpy(&(loTriFactor->AA_h[offset]), v, nz);CHKERRQ(ierr); 481da79fbbcSStefano Zampini offset += nz; 4822cbc15d9SMark loTriFactor->AA_h[offset] = 1.0; 483da79fbbcSStefano Zampini offset += 1; 484da79fbbcSStefano Zampini v += nz; 485da79fbbcSStefano Zampini } 4862cbc15d9SMark loTriFactor->csrMat->values->assign(loTriFactor->AA_h, loTriFactor->AA_h+nzLower); 487da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(nzLower*sizeof(PetscScalar));CHKERRQ(ierr); 488da79fbbcSStefano Zampini } 4899ae82921SPaul Mullowney } catch(char *ex) { 4909ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 4919ae82921SPaul Mullowney } 4929ae82921SPaul Mullowney } 4939ae82921SPaul Mullowney PetscFunctionReturn(0); 4949ae82921SPaul Mullowney } 4959ae82921SPaul Mullowney 496087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(Mat A) 4979ae82921SPaul Mullowney { 4989ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 4999ae82921SPaul Mullowney PetscInt n = A->rmap->n; 5009ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 501aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 5029ae82921SPaul Mullowney cusparseStatus_t stat; 5039ae82921SPaul Mullowney const PetscInt *aj = a->j,*adiag = a->diag,*vi; 5049ae82921SPaul Mullowney const MatScalar *aa = a->a,*v; 5059ae82921SPaul Mullowney PetscInt *AiUp, *AjUp; 5069ae82921SPaul Mullowney PetscInt i,nz, nzUpper, offset; 5079ae82921SPaul Mullowney PetscErrorCode ierr; 50857d48284SJunchao Zhang cudaError_t cerr; 5099ae82921SPaul Mullowney 5109ae82921SPaul Mullowney PetscFunctionBegin; 511cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 512c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 5139ae82921SPaul Mullowney try { 5149ae82921SPaul Mullowney /* next, figure out the number of nonzeros in the upper triangular matrix. */ 5159ae82921SPaul Mullowney nzUpper = adiag[0]-adiag[n]; 516da79fbbcSStefano Zampini if (!upTriFactor) { 5172cbc15d9SMark PetscScalar *AAUp; 5182cbc15d9SMark 5192cbc15d9SMark cerr = cudaMallocHost((void**) &AAUp, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 5202cbc15d9SMark 5219ae82921SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 52257d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiUp, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 52357d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjUp, nzUpper*sizeof(PetscInt));CHKERRCUDA(cerr); 5249ae82921SPaul Mullowney 5259ae82921SPaul Mullowney /* Fill the upper triangular matrix */ 5269ae82921SPaul Mullowney AiUp[0]=(PetscInt) 0; 5279ae82921SPaul Mullowney AiUp[n]=nzUpper; 5289ae82921SPaul Mullowney offset = nzUpper; 5299ae82921SPaul Mullowney for (i=n-1; i>=0; i--) { 5309ae82921SPaul Mullowney v = aa + adiag[i+1] + 1; 5319ae82921SPaul Mullowney vi = aj + adiag[i+1] + 1; 5329ae82921SPaul Mullowney 533e057df02SPaul Mullowney /* number of elements NOT on the diagonal */ 5349ae82921SPaul Mullowney nz = adiag[i] - adiag[i+1]-1; 5359ae82921SPaul Mullowney 536e057df02SPaul Mullowney /* decrement the offset */ 5379ae82921SPaul Mullowney offset -= (nz+1); 5389ae82921SPaul Mullowney 539e057df02SPaul Mullowney /* first, set the diagonal elements */ 5409ae82921SPaul Mullowney AjUp[offset] = (PetscInt) i; 54109f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1./v[nz]; 5429ae82921SPaul Mullowney AiUp[i] = AiUp[i+1] - (nz+1); 5439ae82921SPaul Mullowney 544580bdb30SBarry Smith ierr = PetscArraycpy(&(AjUp[offset+1]), vi, nz);CHKERRQ(ierr); 545580bdb30SBarry Smith ierr = PetscArraycpy(&(AAUp[offset+1]), v, nz);CHKERRQ(ierr); 5469ae82921SPaul Mullowney } 5472205254eSKarl Rupp 548aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 549da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactor);CHKERRQ(ierr); 550da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 5512205254eSKarl Rupp 552aa372e3fSPaul Mullowney /* Create the matrix description */ 55357d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactor->descr);CHKERRCUSPARSE(stat); 55457d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 5551b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 556afb2bd1cSJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 557afb2bd1cSJunchao Zhang #else 55857d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 559afb2bd1cSJunchao Zhang #endif 56057d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 56157d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT);CHKERRCUSPARSE(stat); 562aa372e3fSPaul Mullowney 563aa372e3fSPaul Mullowney /* set the operation */ 564aa372e3fSPaul Mullowney upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 565aa372e3fSPaul Mullowney 566aa372e3fSPaul Mullowney /* set the matrix */ 567aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 568aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = n; 569aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = n; 570aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = nzUpper; 571aa372e3fSPaul Mullowney 572aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(n+1); 573aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+n+1); 574aa372e3fSPaul Mullowney 575aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(nzUpper); 576aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp+nzUpper); 577aa372e3fSPaul Mullowney 578aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(nzUpper); 579aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp+nzUpper); 580aa372e3fSPaul Mullowney 581afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 582da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 583afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 5841b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 585afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactor->solveOp, 586afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 587afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 588afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, 589afb2bd1cSJunchao Zhang &upTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 590afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->solveBuffer,upTriFactor->solveBufferSize);CHKERRCUDA(cerr); 591afb2bd1cSJunchao Zhang #endif 592afb2bd1cSJunchao Zhang 593aa372e3fSPaul Mullowney /* perform the solve analysis */ 594aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, 595aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 596aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 597afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo 5981b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 599afb2bd1cSJunchao Zhang ,upTriFactor->solvePolicy, upTriFactor->solveBuffer 600afb2bd1cSJunchao Zhang #endif 601afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 602da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 603da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 604aa372e3fSPaul Mullowney 605da79fbbcSStefano Zampini /* assign the pointer */ 606aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtr = upTriFactor; 6072cbc15d9SMark upTriFactor->AA_h = AAUp; 60857d48284SJunchao Zhang cerr = cudaFreeHost(AiUp);CHKERRCUDA(cerr); 60957d48284SJunchao Zhang cerr = cudaFreeHost(AjUp);CHKERRCUDA(cerr); 6104863603aSSatish Balay ierr = PetscLogCpuToGpu((n+1+nzUpper)*sizeof(int)+nzUpper*sizeof(PetscScalar));CHKERRQ(ierr); 611da79fbbcSStefano Zampini } else { 6122cbc15d9SMark if (!upTriFactor->AA_h) { 6132cbc15d9SMark cerr = cudaMallocHost((void**) &upTriFactor->AA_h, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 6142cbc15d9SMark } 615da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 616da79fbbcSStefano Zampini offset = nzUpper; 617da79fbbcSStefano Zampini for (i=n-1; i>=0; i--) { 618da79fbbcSStefano Zampini v = aa + adiag[i+1] + 1; 619da79fbbcSStefano Zampini 620da79fbbcSStefano Zampini /* number of elements NOT on the diagonal */ 621da79fbbcSStefano Zampini nz = adiag[i] - adiag[i+1]-1; 622da79fbbcSStefano Zampini 623da79fbbcSStefano Zampini /* decrement the offset */ 624da79fbbcSStefano Zampini offset -= (nz+1); 625da79fbbcSStefano Zampini 626da79fbbcSStefano Zampini /* first, set the diagonal elements */ 6272cbc15d9SMark upTriFactor->AA_h[offset] = 1./v[nz]; 6282cbc15d9SMark ierr = PetscArraycpy(&(upTriFactor->AA_h[offset+1]), v, nz);CHKERRQ(ierr); 629da79fbbcSStefano Zampini } 6302cbc15d9SMark upTriFactor->csrMat->values->assign(upTriFactor->AA_h, upTriFactor->AA_h+nzUpper); 631da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(nzUpper*sizeof(PetscScalar));CHKERRQ(ierr); 632da79fbbcSStefano Zampini } 6339ae82921SPaul Mullowney } catch(char *ex) { 6349ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 6359ae82921SPaul Mullowney } 6369ae82921SPaul Mullowney } 6379ae82921SPaul Mullowney PetscFunctionReturn(0); 6389ae82921SPaul Mullowney } 6399ae82921SPaul Mullowney 640087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(Mat A) 6419ae82921SPaul Mullowney { 6429ae82921SPaul Mullowney PetscErrorCode ierr; 6439ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 6449ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 6459ae82921SPaul Mullowney IS isrow = a->row,iscol = a->icol; 6469ae82921SPaul Mullowney PetscBool row_identity,col_identity; 6479ae82921SPaul Mullowney PetscInt n = A->rmap->n; 6489ae82921SPaul Mullowney 6499ae82921SPaul Mullowney PetscFunctionBegin; 650da79fbbcSStefano Zampini if (!cusparseTriFactors) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 651087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildILULowerTriMatrix(A);CHKERRQ(ierr); 652087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildILUUpperTriMatrix(A);CHKERRQ(ierr); 6532205254eSKarl Rupp 654da79fbbcSStefano Zampini if (!cusparseTriFactors->workVector) { cusparseTriFactors->workVector = new THRUSTARRAY(n); } 655aa372e3fSPaul Mullowney cusparseTriFactors->nnz=a->nz; 6569ae82921SPaul Mullowney 657c70f7ee4SJunchao Zhang A->offloadmask = PETSC_OFFLOAD_BOTH; 658e057df02SPaul Mullowney /* lower triangular indices */ 6599ae82921SPaul Mullowney ierr = ISIdentity(isrow,&row_identity);CHKERRQ(ierr); 660da79fbbcSStefano Zampini if (!row_identity && !cusparseTriFactors->rpermIndices) { 661da79fbbcSStefano Zampini const PetscInt *r; 662da79fbbcSStefano Zampini 663da79fbbcSStefano Zampini ierr = ISGetIndices(isrow,&r);CHKERRQ(ierr); 664aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 665aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(r, r+n); 6669ae82921SPaul Mullowney ierr = ISRestoreIndices(isrow,&r);CHKERRQ(ierr); 667da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 668da79fbbcSStefano Zampini } 6699ae82921SPaul Mullowney 670e057df02SPaul Mullowney /* upper triangular indices */ 6719ae82921SPaul Mullowney ierr = ISIdentity(iscol,&col_identity);CHKERRQ(ierr); 672da79fbbcSStefano Zampini if (!col_identity && !cusparseTriFactors->cpermIndices) { 673da79fbbcSStefano Zampini const PetscInt *c; 674da79fbbcSStefano Zampini 675da79fbbcSStefano Zampini ierr = ISGetIndices(iscol,&c);CHKERRQ(ierr); 676aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 677aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices->assign(c, c+n); 6789ae82921SPaul Mullowney ierr = ISRestoreIndices(iscol,&c);CHKERRQ(ierr); 679da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 680da79fbbcSStefano Zampini } 6819ae82921SPaul Mullowney PetscFunctionReturn(0); 6829ae82921SPaul Mullowney } 6839ae82921SPaul Mullowney 684087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEBuildICCTriMatrices(Mat A) 685087f3262SPaul Mullowney { 686087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 687087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 688aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 689aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 690087f3262SPaul Mullowney cusparseStatus_t stat; 691087f3262SPaul Mullowney PetscErrorCode ierr; 69257d48284SJunchao Zhang cudaError_t cerr; 693087f3262SPaul Mullowney PetscInt *AiUp, *AjUp; 694087f3262SPaul Mullowney PetscScalar *AAUp; 695087f3262SPaul Mullowney PetscScalar *AALo; 696087f3262SPaul Mullowney PetscInt nzUpper = a->nz,n = A->rmap->n,i,offset,nz,j; 697087f3262SPaul Mullowney Mat_SeqSBAIJ *b = (Mat_SeqSBAIJ*)A->data; 698087f3262SPaul Mullowney const PetscInt *ai = b->i,*aj = b->j,*vj; 699087f3262SPaul Mullowney const MatScalar *aa = b->a,*v; 700087f3262SPaul Mullowney 701087f3262SPaul Mullowney PetscFunctionBegin; 702cf00fe3bSKarl Rupp if (!n) PetscFunctionReturn(0); 703c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 704087f3262SPaul Mullowney try { 705da79fbbcSStefano Zampini cerr = cudaMallocHost((void**) &AAUp, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 706da79fbbcSStefano Zampini cerr = cudaMallocHost((void**) &AALo, nzUpper*sizeof(PetscScalar));CHKERRCUDA(cerr); 707da79fbbcSStefano Zampini if (!upTriFactor && !loTriFactor) { 708087f3262SPaul Mullowney /* Allocate Space for the upper triangular matrix */ 70957d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AiUp, (n+1)*sizeof(PetscInt));CHKERRCUDA(cerr); 71057d48284SJunchao Zhang cerr = cudaMallocHost((void**) &AjUp, nzUpper*sizeof(PetscInt));CHKERRCUDA(cerr); 711087f3262SPaul Mullowney 712087f3262SPaul Mullowney /* Fill the upper triangular matrix */ 713087f3262SPaul Mullowney AiUp[0]=(PetscInt) 0; 714087f3262SPaul Mullowney AiUp[n]=nzUpper; 715087f3262SPaul Mullowney offset = 0; 716087f3262SPaul Mullowney for (i=0; i<n; i++) { 717087f3262SPaul Mullowney /* set the pointers */ 718087f3262SPaul Mullowney v = aa + ai[i]; 719087f3262SPaul Mullowney vj = aj + ai[i]; 720087f3262SPaul Mullowney nz = ai[i+1] - ai[i] - 1; /* exclude diag[i] */ 721087f3262SPaul Mullowney 722087f3262SPaul Mullowney /* first, set the diagonal elements */ 723087f3262SPaul Mullowney AjUp[offset] = (PetscInt) i; 72409f51544SAlejandro Lamas Daviña AAUp[offset] = (MatScalar)1.0/v[nz]; 725087f3262SPaul Mullowney AiUp[i] = offset; 72609f51544SAlejandro Lamas Daviña AALo[offset] = (MatScalar)1.0/v[nz]; 727087f3262SPaul Mullowney 728087f3262SPaul Mullowney offset+=1; 729087f3262SPaul Mullowney if (nz>0) { 730f22e0265SBarry Smith ierr = PetscArraycpy(&(AjUp[offset]), vj, nz);CHKERRQ(ierr); 731580bdb30SBarry Smith ierr = PetscArraycpy(&(AAUp[offset]), v, nz);CHKERRQ(ierr); 732087f3262SPaul Mullowney for (j=offset; j<offset+nz; j++) { 733087f3262SPaul Mullowney AAUp[j] = -AAUp[j]; 734087f3262SPaul Mullowney AALo[j] = AAUp[j]/v[nz]; 735087f3262SPaul Mullowney } 736087f3262SPaul Mullowney offset+=nz; 737087f3262SPaul Mullowney } 738087f3262SPaul Mullowney } 739087f3262SPaul Mullowney 740aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 741da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactor);CHKERRQ(ierr); 742da79fbbcSStefano Zampini upTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 743087f3262SPaul Mullowney 744aa372e3fSPaul Mullowney /* Create the matrix description */ 74557d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactor->descr);CHKERRCUSPARSE(stat); 74657d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 7471b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 748afb2bd1cSJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 749afb2bd1cSJunchao Zhang #else 75057d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 751afb2bd1cSJunchao Zhang #endif 75257d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 75357d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactor->descr, CUSPARSE_DIAG_TYPE_UNIT);CHKERRCUSPARSE(stat); 754087f3262SPaul Mullowney 755aa372e3fSPaul Mullowney /* set the matrix */ 756aa372e3fSPaul Mullowney upTriFactor->csrMat = new CsrMatrix; 757aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows = A->rmap->n; 758aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols = A->cmap->n; 759aa372e3fSPaul Mullowney upTriFactor->csrMat->num_entries = a->nz; 760aa372e3fSPaul Mullowney 761aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 762aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+A->rmap->n+1); 763aa372e3fSPaul Mullowney 764aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 765aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->assign(AjUp, AjUp+a->nz); 766aa372e3fSPaul Mullowney 767aa372e3fSPaul Mullowney upTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 768aa372e3fSPaul Mullowney upTriFactor->csrMat->values->assign(AAUp, AAUp+a->nz); 769aa372e3fSPaul Mullowney 770afb2bd1cSJunchao Zhang /* set the operation */ 771afb2bd1cSJunchao Zhang upTriFactor->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 772afb2bd1cSJunchao Zhang 773afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 774da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 775afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactor->solveInfo);CHKERRCUSPARSE(stat); 7761b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 777afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactor->solveOp, 778afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 779afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 780afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo, 781afb2bd1cSJunchao Zhang &upTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 782afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->solveBuffer,upTriFactor->solveBufferSize);CHKERRCUDA(cerr); 783afb2bd1cSJunchao Zhang #endif 784afb2bd1cSJunchao Zhang 785aa372e3fSPaul Mullowney /* perform the solve analysis */ 786aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactor->solveOp, 787aa372e3fSPaul Mullowney upTriFactor->csrMat->num_rows, upTriFactor->csrMat->num_entries, upTriFactor->descr, 788aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), upTriFactor->csrMat->row_offsets->data().get(), 789afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), upTriFactor->solveInfo 7901b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 791afb2bd1cSJunchao Zhang ,upTriFactor->solvePolicy, upTriFactor->solveBuffer 792afb2bd1cSJunchao Zhang #endif 793afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 794da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 795da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 796aa372e3fSPaul Mullowney 797da79fbbcSStefano Zampini /* assign the pointer */ 798aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtr = upTriFactor; 799aa372e3fSPaul Mullowney 800aa372e3fSPaul Mullowney /* allocate space for the triangular factor information */ 801da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactor);CHKERRQ(ierr); 802da79fbbcSStefano Zampini loTriFactor->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 803aa372e3fSPaul Mullowney 804aa372e3fSPaul Mullowney /* Create the matrix description */ 80557d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactor->descr);CHKERRCUSPARSE(stat); 80657d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactor->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 8071b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 808afb2bd1cSJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 809afb2bd1cSJunchao Zhang #else 81057d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactor->descr, CUSPARSE_MATRIX_TYPE_TRIANGULAR);CHKERRCUSPARSE(stat); 811afb2bd1cSJunchao Zhang #endif 81257d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactor->descr, CUSPARSE_FILL_MODE_UPPER);CHKERRCUSPARSE(stat); 81357d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactor->descr, CUSPARSE_DIAG_TYPE_NON_UNIT);CHKERRCUSPARSE(stat); 814aa372e3fSPaul Mullowney 815aa372e3fSPaul Mullowney /* set the operation */ 816aa372e3fSPaul Mullowney loTriFactor->solveOp = CUSPARSE_OPERATION_TRANSPOSE; 817aa372e3fSPaul Mullowney 818aa372e3fSPaul Mullowney /* set the matrix */ 819aa372e3fSPaul Mullowney loTriFactor->csrMat = new CsrMatrix; 820aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows = A->rmap->n; 821aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols = A->cmap->n; 822aa372e3fSPaul Mullowney loTriFactor->csrMat->num_entries = a->nz; 823aa372e3fSPaul Mullowney 824aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 825aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->assign(AiUp, AiUp+A->rmap->n+1); 826aa372e3fSPaul Mullowney 827aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices = new THRUSTINTARRAY32(a->nz); 828aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->assign(AjUp, AjUp+a->nz); 829aa372e3fSPaul Mullowney 830aa372e3fSPaul Mullowney loTriFactor->csrMat->values = new THRUSTARRAY(a->nz); 831aa372e3fSPaul Mullowney loTriFactor->csrMat->values->assign(AALo, AALo+a->nz); 832aa372e3fSPaul Mullowney 833afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 834da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 835afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactor->solveInfo);CHKERRCUSPARSE(stat); 8361b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 837afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactor->solveOp, 838afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 839afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 840afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo, 841afb2bd1cSJunchao Zhang &loTriFactor->solveBufferSize);CHKERRCUSPARSE(stat); 842afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactor->solveBuffer,loTriFactor->solveBufferSize);CHKERRCUDA(cerr); 843afb2bd1cSJunchao Zhang #endif 844afb2bd1cSJunchao Zhang 845aa372e3fSPaul Mullowney /* perform the solve analysis */ 846aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactor->solveOp, 847aa372e3fSPaul Mullowney loTriFactor->csrMat->num_rows, loTriFactor->csrMat->num_entries, loTriFactor->descr, 848aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), loTriFactor->csrMat->row_offsets->data().get(), 849afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), loTriFactor->solveInfo 8501b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 851afb2bd1cSJunchao Zhang ,loTriFactor->solvePolicy, loTriFactor->solveBuffer 852afb2bd1cSJunchao Zhang #endif 853afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 854da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 855da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 856aa372e3fSPaul Mullowney 857da79fbbcSStefano Zampini /* assign the pointer */ 858aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtr = loTriFactor; 859087f3262SPaul Mullowney 860da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2*(((A->rmap->n+1)+(a->nz))*sizeof(int)+(a->nz)*sizeof(PetscScalar)));CHKERRQ(ierr); 86157d48284SJunchao Zhang cerr = cudaFreeHost(AiUp);CHKERRCUDA(cerr); 86257d48284SJunchao Zhang cerr = cudaFreeHost(AjUp);CHKERRCUDA(cerr); 863da79fbbcSStefano Zampini } else { 864da79fbbcSStefano Zampini /* Fill the upper triangular matrix */ 865da79fbbcSStefano Zampini offset = 0; 866da79fbbcSStefano Zampini for (i=0; i<n; i++) { 867da79fbbcSStefano Zampini /* set the pointers */ 868da79fbbcSStefano Zampini v = aa + ai[i]; 869da79fbbcSStefano Zampini nz = ai[i+1] - ai[i] - 1; /* exclude diag[i] */ 870da79fbbcSStefano Zampini 871da79fbbcSStefano Zampini /* first, set the diagonal elements */ 872da79fbbcSStefano Zampini AAUp[offset] = 1.0/v[nz]; 873da79fbbcSStefano Zampini AALo[offset] = 1.0/v[nz]; 874da79fbbcSStefano Zampini 875da79fbbcSStefano Zampini offset+=1; 876da79fbbcSStefano Zampini if (nz>0) { 877da79fbbcSStefano Zampini ierr = PetscArraycpy(&(AAUp[offset]), v, nz);CHKERRQ(ierr); 878da79fbbcSStefano Zampini for (j=offset; j<offset+nz; j++) { 879da79fbbcSStefano Zampini AAUp[j] = -AAUp[j]; 880da79fbbcSStefano Zampini AALo[j] = AAUp[j]/v[nz]; 881da79fbbcSStefano Zampini } 882da79fbbcSStefano Zampini offset+=nz; 883da79fbbcSStefano Zampini } 884da79fbbcSStefano Zampini } 885da79fbbcSStefano Zampini if (!upTriFactor) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 886da79fbbcSStefano Zampini if (!loTriFactor) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 887da79fbbcSStefano Zampini upTriFactor->csrMat->values->assign(AAUp, AAUp+a->nz); 888da79fbbcSStefano Zampini loTriFactor->csrMat->values->assign(AALo, AALo+a->nz); 889da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2*(a->nz)*sizeof(PetscScalar));CHKERRQ(ierr); 890da79fbbcSStefano Zampini } 89157d48284SJunchao Zhang cerr = cudaFreeHost(AAUp);CHKERRCUDA(cerr); 89257d48284SJunchao Zhang cerr = cudaFreeHost(AALo);CHKERRCUDA(cerr); 893087f3262SPaul Mullowney } catch(char *ex) { 894087f3262SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 895087f3262SPaul Mullowney } 896087f3262SPaul Mullowney } 897087f3262SPaul Mullowney PetscFunctionReturn(0); 898087f3262SPaul Mullowney } 899087f3262SPaul Mullowney 900087f3262SPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(Mat A) 9019ae82921SPaul Mullowney { 9029ae82921SPaul Mullowney PetscErrorCode ierr; 903087f3262SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 904087f3262SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 905087f3262SPaul Mullowney IS ip = a->row; 906087f3262SPaul Mullowney PetscBool perm_identity; 907087f3262SPaul Mullowney PetscInt n = A->rmap->n; 908087f3262SPaul Mullowney 909087f3262SPaul Mullowney PetscFunctionBegin; 910da79fbbcSStefano Zampini if (!cusparseTriFactors) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cusparseTriFactors"); 911087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEBuildICCTriMatrices(A);CHKERRQ(ierr); 912da79fbbcSStefano Zampini if (!cusparseTriFactors->workVector) { cusparseTriFactors->workVector = new THRUSTARRAY(n); } 913aa372e3fSPaul Mullowney cusparseTriFactors->nnz=(a->nz-n)*2 + n; 914aa372e3fSPaul Mullowney 915da79fbbcSStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 916da79fbbcSStefano Zampini 917087f3262SPaul Mullowney /* lower triangular indices */ 918087f3262SPaul Mullowney ierr = ISIdentity(ip,&perm_identity);CHKERRQ(ierr); 919087f3262SPaul Mullowney if (!perm_identity) { 9204e4bbfaaSStefano Zampini IS iip; 921da79fbbcSStefano Zampini const PetscInt *irip,*rip; 9224e4bbfaaSStefano Zampini 9234e4bbfaaSStefano Zampini ierr = ISInvertPermutation(ip,PETSC_DECIDE,&iip);CHKERRQ(ierr); 9244e4bbfaaSStefano Zampini ierr = ISGetIndices(iip,&irip);CHKERRQ(ierr); 925da79fbbcSStefano Zampini ierr = ISGetIndices(ip,&rip);CHKERRQ(ierr); 926aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices = new THRUSTINTARRAY(n); 927aa372e3fSPaul Mullowney cusparseTriFactors->rpermIndices->assign(rip, rip+n); 928aa372e3fSPaul Mullowney cusparseTriFactors->cpermIndices = new THRUSTINTARRAY(n); 9294e4bbfaaSStefano Zampini cusparseTriFactors->cpermIndices->assign(irip, irip+n); 9304e4bbfaaSStefano Zampini ierr = ISRestoreIndices(iip,&irip);CHKERRQ(ierr); 9314e4bbfaaSStefano Zampini ierr = ISDestroy(&iip);CHKERRQ(ierr); 932087f3262SPaul Mullowney ierr = ISRestoreIndices(ip,&rip);CHKERRQ(ierr); 933da79fbbcSStefano Zampini ierr = PetscLogCpuToGpu(2.*n*sizeof(PetscInt));CHKERRQ(ierr); 934da79fbbcSStefano Zampini } 935087f3262SPaul Mullowney PetscFunctionReturn(0); 936087f3262SPaul Mullowney } 937087f3262SPaul Mullowney 9386fa9248bSJed Brown static PetscErrorCode MatLUFactorNumeric_SeqAIJCUSPARSE(Mat B,Mat A,const MatFactorInfo *info) 9399ae82921SPaul Mullowney { 9409ae82921SPaul Mullowney Mat_SeqAIJ *b = (Mat_SeqAIJ*)B->data; 9419ae82921SPaul Mullowney IS isrow = b->row,iscol = b->col; 9429ae82921SPaul Mullowney PetscBool row_identity,col_identity; 943b175d8bbSPaul Mullowney PetscErrorCode ierr; 9449ae82921SPaul Mullowney 9459ae82921SPaul Mullowney PetscFunctionBegin; 94657181aedSStefano Zampini ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 9479ae82921SPaul Mullowney ierr = MatLUFactorNumeric_SeqAIJ(B,A,info);CHKERRQ(ierr); 948ccdfe979SStefano Zampini B->offloadmask = PETSC_OFFLOAD_CPU; 949e057df02SPaul Mullowney /* determine which version of MatSolve needs to be used. */ 9509ae82921SPaul Mullowney ierr = ISIdentity(isrow,&row_identity);CHKERRQ(ierr); 9519ae82921SPaul Mullowney ierr = ISIdentity(iscol,&col_identity);CHKERRQ(ierr); 952bda325fcSPaul Mullowney if (row_identity && col_identity) { 953bda325fcSPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 954bda325fcSPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 9554e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 9564e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 957bda325fcSPaul Mullowney } else { 958bda325fcSPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE; 959bda325fcSPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 9604e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 9614e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 962bda325fcSPaul Mullowney } 9638dc1d2a3SPaul Mullowney 964e057df02SPaul Mullowney /* get the triangular factors */ 965087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEILUAnalysisAndCopyToGPU(B);CHKERRQ(ierr); 9669ae82921SPaul Mullowney PetscFunctionReturn(0); 9679ae82921SPaul Mullowney } 9689ae82921SPaul Mullowney 969087f3262SPaul Mullowney static PetscErrorCode MatCholeskyFactorNumeric_SeqAIJCUSPARSE(Mat B,Mat A,const MatFactorInfo *info) 970087f3262SPaul Mullowney { 971087f3262SPaul Mullowney Mat_SeqAIJ *b = (Mat_SeqAIJ*)B->data; 972087f3262SPaul Mullowney IS ip = b->row; 973087f3262SPaul Mullowney PetscBool perm_identity; 974b175d8bbSPaul Mullowney PetscErrorCode ierr; 975087f3262SPaul Mullowney 976087f3262SPaul Mullowney PetscFunctionBegin; 97757181aedSStefano Zampini ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 978087f3262SPaul Mullowney ierr = MatCholeskyFactorNumeric_SeqAIJ(B,A,info);CHKERRQ(ierr); 979ccdfe979SStefano Zampini B->offloadmask = PETSC_OFFLOAD_CPU; 980087f3262SPaul Mullowney /* determine which version of MatSolve needs to be used. */ 981087f3262SPaul Mullowney ierr = ISIdentity(ip,&perm_identity);CHKERRQ(ierr); 982087f3262SPaul Mullowney if (perm_identity) { 983087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE_NaturalOrdering; 984087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering; 9854e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 9864e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 987087f3262SPaul Mullowney } else { 988087f3262SPaul Mullowney B->ops->solve = MatSolve_SeqAIJCUSPARSE; 989087f3262SPaul Mullowney B->ops->solvetranspose = MatSolveTranspose_SeqAIJCUSPARSE; 9904e4bbfaaSStefano Zampini B->ops->matsolve = NULL; 9914e4bbfaaSStefano Zampini B->ops->matsolvetranspose = NULL; 992087f3262SPaul Mullowney } 993087f3262SPaul Mullowney 994087f3262SPaul Mullowney /* get the triangular factors */ 995087f3262SPaul Mullowney ierr = MatSeqAIJCUSPARSEICCAnalysisAndCopyToGPU(B);CHKERRQ(ierr); 996087f3262SPaul Mullowney PetscFunctionReturn(0); 997087f3262SPaul Mullowney } 9989ae82921SPaul Mullowney 999b175d8bbSPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(Mat A) 1000bda325fcSPaul Mullowney { 1001bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1002aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1003aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1004da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT; 1005da79fbbcSStefano Zampini Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT; 1006bda325fcSPaul Mullowney cusparseStatus_t stat; 1007aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 1008aa372e3fSPaul Mullowney cusparseMatrixType_t matrixType; 1009aa372e3fSPaul Mullowney cusparseFillMode_t fillMode; 1010aa372e3fSPaul Mullowney cusparseDiagType_t diagType; 10111b0a6780SStefano Zampini cudaError_t cerr; 1012da79fbbcSStefano Zampini PetscErrorCode ierr; 1013b175d8bbSPaul Mullowney 1014bda325fcSPaul Mullowney PetscFunctionBegin; 1015aa372e3fSPaul Mullowney /* allocate space for the transpose of the lower triangular factor */ 1016da79fbbcSStefano Zampini ierr = PetscNew(&loTriFactorT);CHKERRQ(ierr); 1017da79fbbcSStefano Zampini loTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 1018aa372e3fSPaul Mullowney 1019aa372e3fSPaul Mullowney /* set the matrix descriptors of the lower triangular factor */ 1020aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(loTriFactor->descr); 1021aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(loTriFactor->descr); 1022aa372e3fSPaul Mullowney fillMode = cusparseGetMatFillMode(loTriFactor->descr)==CUSPARSE_FILL_MODE_UPPER ? 1023aa372e3fSPaul Mullowney CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 1024aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(loTriFactor->descr); 1025aa372e3fSPaul Mullowney 1026aa372e3fSPaul Mullowney /* Create the matrix description */ 102757d48284SJunchao Zhang stat = cusparseCreateMatDescr(&loTriFactorT->descr);CHKERRCUSPARSE(stat); 102857d48284SJunchao Zhang stat = cusparseSetMatIndexBase(loTriFactorT->descr, indexBase);CHKERRCUSPARSE(stat); 102957d48284SJunchao Zhang stat = cusparseSetMatType(loTriFactorT->descr, matrixType);CHKERRCUSPARSE(stat); 103057d48284SJunchao Zhang stat = cusparseSetMatFillMode(loTriFactorT->descr, fillMode);CHKERRCUSPARSE(stat); 103157d48284SJunchao Zhang stat = cusparseSetMatDiagType(loTriFactorT->descr, diagType);CHKERRCUSPARSE(stat); 1032aa372e3fSPaul Mullowney 1033aa372e3fSPaul Mullowney /* set the operation */ 1034aa372e3fSPaul Mullowney loTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 1035aa372e3fSPaul Mullowney 1036aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the lower triangular factor*/ 1037aa372e3fSPaul Mullowney loTriFactorT->csrMat = new CsrMatrix; 1038afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows = loTriFactor->csrMat->num_cols; 1039afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_cols = loTriFactor->csrMat->num_rows; 1040aa372e3fSPaul Mullowney loTriFactorT->csrMat->num_entries = loTriFactor->csrMat->num_entries; 1041afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_rows+1); 1042afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(loTriFactorT->csrMat->num_entries); 1043afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values = new THRUSTARRAY(loTriFactorT->csrMat->num_entries); 1044aa372e3fSPaul Mullowney 1045aa372e3fSPaul Mullowney /* compute the transpose of the lower triangular factor, i.e. the CSC */ 1046afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1047afb2bd1cSJunchao Zhang stat = cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, 1048afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, 1049afb2bd1cSJunchao Zhang loTriFactor->csrMat->values->data().get(), 1050afb2bd1cSJunchao Zhang loTriFactor->csrMat->row_offsets->data().get(), 1051afb2bd1cSJunchao Zhang loTriFactor->csrMat->column_indices->data().get(), 1052afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), 1053afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1054afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC,indexBase, 1055afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1, &loTriFactor->csr2cscBufferSize);CHKERRCUSPARSE(stat); 10561b0a6780SStefano Zampini cerr = cudaMalloc(&loTriFactor->csr2cscBuffer,loTriFactor->csr2cscBufferSize);CHKERRCUDA(cerr); 1057afb2bd1cSJunchao Zhang #endif 1058afb2bd1cSJunchao Zhang 1059da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1060aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparseTriFactors->handle, loTriFactor->csrMat->num_rows, 1061aa372e3fSPaul Mullowney loTriFactor->csrMat->num_cols, loTriFactor->csrMat->num_entries, 1062aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1063aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1064aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1065aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1066afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1067afb2bd1cSJunchao Zhang loTriFactorT->csrMat->row_offsets->data().get(), loTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1068afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase, 1069afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1, loTriFactor->csr2cscBuffer 1070afb2bd1cSJunchao Zhang #else 1071afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1072afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase 1073afb2bd1cSJunchao Zhang #endif 1074afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 1075da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1076da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1077aa372e3fSPaul Mullowney 1078afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 1079da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1080afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&loTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 10811b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1082afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, loTriFactorT->solveOp, 1083afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, 1084afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1085afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->solveInfo, 1086afb2bd1cSJunchao Zhang &loTriFactorT->solveBufferSize);CHKERRCUSPARSE(stat); 1087afb2bd1cSJunchao Zhang cerr = cudaMalloc(&loTriFactorT->solveBuffer,loTriFactorT->solveBufferSize);CHKERRCUDA(cerr); 1088afb2bd1cSJunchao Zhang #endif 1089afb2bd1cSJunchao Zhang 1090afb2bd1cSJunchao Zhang /* perform the solve analysis */ 1091aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, loTriFactorT->solveOp, 1092afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, loTriFactorT->csrMat->num_entries, loTriFactorT->descr, 1093afb2bd1cSJunchao Zhang loTriFactorT->csrMat->values->data().get(), loTriFactorT->csrMat->row_offsets->data().get(), 1094afb2bd1cSJunchao Zhang loTriFactorT->csrMat->column_indices->data().get(), loTriFactorT->solveInfo 10951b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1096afb2bd1cSJunchao Zhang ,loTriFactorT->solvePolicy, loTriFactorT->solveBuffer 1097afb2bd1cSJunchao Zhang #endif 1098afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 1099da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1100da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1101aa372e3fSPaul Mullowney 1102da79fbbcSStefano Zampini /* assign the pointer */ 1103aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->loTriFactorPtrTranspose = loTriFactorT; 1104aa372e3fSPaul Mullowney 1105aa372e3fSPaul Mullowney /*********************************************/ 1106aa372e3fSPaul Mullowney /* Now the Transpose of the Upper Tri Factor */ 1107aa372e3fSPaul Mullowney /*********************************************/ 1108aa372e3fSPaul Mullowney 1109aa372e3fSPaul Mullowney /* allocate space for the transpose of the upper triangular factor */ 1110da79fbbcSStefano Zampini ierr = PetscNew(&upTriFactorT);CHKERRQ(ierr); 1111da79fbbcSStefano Zampini upTriFactorT->solvePolicy = CUSPARSE_SOLVE_POLICY_USE_LEVEL; 1112aa372e3fSPaul Mullowney 1113aa372e3fSPaul Mullowney /* set the matrix descriptors of the upper triangular factor */ 1114aa372e3fSPaul Mullowney matrixType = cusparseGetMatType(upTriFactor->descr); 1115aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(upTriFactor->descr); 1116aa372e3fSPaul Mullowney fillMode = cusparseGetMatFillMode(upTriFactor->descr)==CUSPARSE_FILL_MODE_UPPER ? 1117aa372e3fSPaul Mullowney CUSPARSE_FILL_MODE_LOWER : CUSPARSE_FILL_MODE_UPPER; 1118aa372e3fSPaul Mullowney diagType = cusparseGetMatDiagType(upTriFactor->descr); 1119aa372e3fSPaul Mullowney 1120aa372e3fSPaul Mullowney /* Create the matrix description */ 112157d48284SJunchao Zhang stat = cusparseCreateMatDescr(&upTriFactorT->descr);CHKERRCUSPARSE(stat); 112257d48284SJunchao Zhang stat = cusparseSetMatIndexBase(upTriFactorT->descr, indexBase);CHKERRCUSPARSE(stat); 112357d48284SJunchao Zhang stat = cusparseSetMatType(upTriFactorT->descr, matrixType);CHKERRCUSPARSE(stat); 112457d48284SJunchao Zhang stat = cusparseSetMatFillMode(upTriFactorT->descr, fillMode);CHKERRCUSPARSE(stat); 112557d48284SJunchao Zhang stat = cusparseSetMatDiagType(upTriFactorT->descr, diagType);CHKERRCUSPARSE(stat); 1126aa372e3fSPaul Mullowney 1127aa372e3fSPaul Mullowney /* set the operation */ 1128aa372e3fSPaul Mullowney upTriFactorT->solveOp = CUSPARSE_OPERATION_NON_TRANSPOSE; 1129aa372e3fSPaul Mullowney 1130aa372e3fSPaul Mullowney /* allocate GPU space for the CSC of the upper triangular factor*/ 1131aa372e3fSPaul Mullowney upTriFactorT->csrMat = new CsrMatrix; 1132afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows = upTriFactor->csrMat->num_cols; 1133afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_cols = upTriFactor->csrMat->num_rows; 1134aa372e3fSPaul Mullowney upTriFactorT->csrMat->num_entries = upTriFactor->csrMat->num_entries; 1135afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_rows+1); 1136afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices = new THRUSTINTARRAY32(upTriFactorT->csrMat->num_entries); 1137afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values = new THRUSTARRAY(upTriFactorT->csrMat->num_entries); 1138aa372e3fSPaul Mullowney 1139aa372e3fSPaul Mullowney /* compute the transpose of the upper triangular factor, i.e. the CSC */ 1140afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1141afb2bd1cSJunchao Zhang stat = cusparseCsr2cscEx2_bufferSize(cusparseTriFactors->handle,upTriFactor->csrMat->num_rows, 1142afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, 1143afb2bd1cSJunchao Zhang upTriFactor->csrMat->values->data().get(), 1144afb2bd1cSJunchao Zhang upTriFactor->csrMat->row_offsets->data().get(), 1145afb2bd1cSJunchao Zhang upTriFactor->csrMat->column_indices->data().get(), 1146afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), 1147afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1148afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC,indexBase, 1149afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1, &upTriFactor->csr2cscBufferSize);CHKERRCUSPARSE(stat); 1150afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactor->csr2cscBuffer,upTriFactor->csr2cscBufferSize);CHKERRCUDA(cerr); 1151afb2bd1cSJunchao Zhang #endif 1152afb2bd1cSJunchao Zhang 1153da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1154aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparseTriFactors->handle, upTriFactor->csrMat->num_rows, 1155aa372e3fSPaul Mullowney upTriFactor->csrMat->num_cols, upTriFactor->csrMat->num_entries, 1156aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1157aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1158aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1159aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1160afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1161afb2bd1cSJunchao Zhang upTriFactorT->csrMat->row_offsets->data().get(), upTriFactorT->csrMat->column_indices->data().get(), cusparse_scalartype, 1162afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase, 1163afb2bd1cSJunchao Zhang CUSPARSE_CSR2CSC_ALG1, upTriFactor->csr2cscBuffer 1164afb2bd1cSJunchao Zhang #else 1165afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1166afb2bd1cSJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase 1167afb2bd1cSJunchao Zhang #endif 1168afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 1169da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1170da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1171aa372e3fSPaul Mullowney 1172afb2bd1cSJunchao Zhang /* Create the solve analysis information */ 1173da79fbbcSStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1174afb2bd1cSJunchao Zhang stat = cusparse_create_analysis_info(&upTriFactorT->solveInfo);CHKERRCUSPARSE(stat); 11751b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1176afb2bd1cSJunchao Zhang stat = cusparse_get_svbuffsize(cusparseTriFactors->handle, upTriFactorT->solveOp, 1177afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, 1178afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1179afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->solveInfo, 1180afb2bd1cSJunchao Zhang &upTriFactorT->solveBufferSize);CHKERRCUSPARSE(stat); 1181afb2bd1cSJunchao Zhang cerr = cudaMalloc(&upTriFactorT->solveBuffer,upTriFactorT->solveBufferSize);CHKERRCUDA(cerr); 1182afb2bd1cSJunchao Zhang #endif 1183afb2bd1cSJunchao Zhang 1184afb2bd1cSJunchao Zhang /* perform the solve analysis */ 1185aa372e3fSPaul Mullowney stat = cusparse_analysis(cusparseTriFactors->handle, upTriFactorT->solveOp, 1186afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, upTriFactorT->csrMat->num_entries, upTriFactorT->descr, 1187afb2bd1cSJunchao Zhang upTriFactorT->csrMat->values->data().get(), upTriFactorT->csrMat->row_offsets->data().get(), 1188afb2bd1cSJunchao Zhang upTriFactorT->csrMat->column_indices->data().get(), upTriFactorT->solveInfo 11891b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1190afb2bd1cSJunchao Zhang ,upTriFactorT->solvePolicy, upTriFactorT->solveBuffer 1191afb2bd1cSJunchao Zhang #endif 1192afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 1193da79fbbcSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 1194da79fbbcSStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSESolveAnalysis,A,0,0,0);CHKERRQ(ierr); 1195aa372e3fSPaul Mullowney 1196da79fbbcSStefano Zampini /* assign the pointer */ 1197aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSETriFactors*)A->spptr)->upTriFactorPtrTranspose = upTriFactorT; 1198bda325fcSPaul Mullowney PetscFunctionReturn(0); 1199bda325fcSPaul Mullowney } 1200bda325fcSPaul Mullowney 1201*a49f1ed0SStefano Zampini struct PetscScalarToPetscInt 1202*a49f1ed0SStefano Zampini { 1203*a49f1ed0SStefano Zampini __host__ __device__ 1204*a49f1ed0SStefano Zampini PetscInt operator()(PetscScalar s) 1205*a49f1ed0SStefano Zampini { 1206*a49f1ed0SStefano Zampini return (PetscInt)PetscRealPart(s); 1207*a49f1ed0SStefano Zampini } 1208*a49f1ed0SStefano Zampini }; 1209*a49f1ed0SStefano Zampini 1210b175d8bbSPaul Mullowney static PetscErrorCode MatSeqAIJCUSPARSEGenerateTransposeForMult(Mat A) 1211bda325fcSPaul Mullowney { 1212aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 1213*a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *matstruct, *matstructT; 1214bda325fcSPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 1215bda325fcSPaul Mullowney cusparseStatus_t stat; 1216aa372e3fSPaul Mullowney cusparseIndexBase_t indexBase; 1217b06137fdSPaul Mullowney cudaError_t err; 121885ba7357SStefano Zampini PetscErrorCode ierr; 1219b175d8bbSPaul Mullowney 1220bda325fcSPaul Mullowney PetscFunctionBegin; 1221*a49f1ed0SStefano Zampini if (!cusparsestruct->transgen || !A->rmap->n || !A->cmap->n) PetscFunctionReturn(0); 1222*a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 1223*a49f1ed0SStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 1224*a49f1ed0SStefano Zampini if (!matstruct) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing mat struct"); 1225*a49f1ed0SStefano Zampini matstructT = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->matTranspose; 1226*a49f1ed0SStefano Zampini if (cusparsestruct->transupdated && !matstructT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing matTranspose struct"); 1227*a49f1ed0SStefano Zampini if (cusparsestruct->transupdated) PetscFunctionReturn(0); 122885ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1229*a49f1ed0SStefano Zampini if (cusparsestruct->format != MAT_CUSPARSE_CSR) { 1230*a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 1231*a49f1ed0SStefano Zampini } 1232*a49f1ed0SStefano Zampini if (!cusparsestruct->matTranspose) { /* create cusparse matrix */ 1233aa372e3fSPaul Mullowney matstructT = new Mat_SeqAIJCUSPARSEMultStruct; 123457d48284SJunchao Zhang stat = cusparseCreateMatDescr(&matstructT->descr);CHKERRCUSPARSE(stat); 1235aa372e3fSPaul Mullowney indexBase = cusparseGetMatIndexBase(matstruct->descr); 123657d48284SJunchao Zhang stat = cusparseSetMatIndexBase(matstructT->descr, indexBase);CHKERRCUSPARSE(stat); 123757d48284SJunchao Zhang stat = cusparseSetMatType(matstructT->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 1238aa372e3fSPaul Mullowney 1239b06137fdSPaul Mullowney /* set alpha and beta */ 1240afb2bd1cSJunchao Zhang err = cudaMalloc((void **)&(matstructT->alpha_one),sizeof(PetscScalar));CHKERRCUDA(err); 12417656d835SStefano Zampini err = cudaMalloc((void **)&(matstructT->beta_zero),sizeof(PetscScalar));CHKERRCUDA(err); 12427656d835SStefano Zampini err = cudaMalloc((void **)&(matstructT->beta_one), sizeof(PetscScalar));CHKERRCUDA(err); 1243afb2bd1cSJunchao Zhang err = cudaMemcpy(matstructT->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 12447656d835SStefano Zampini err = cudaMemcpy(matstructT->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 12457656d835SStefano Zampini err = cudaMemcpy(matstructT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 1246b06137fdSPaul Mullowney 1247aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 1248aa372e3fSPaul Mullowney CsrMatrix *matrixT = new CsrMatrix; 1249*a49f1ed0SStefano Zampini matstructT->mat = matrixT; 1250554b8892SKarl Rupp matrixT->num_rows = A->cmap->n; 1251554b8892SKarl Rupp matrixT->num_cols = A->rmap->n; 1252aa372e3fSPaul Mullowney matrixT->num_entries = a->nz; 1253a8bd5306SMark Adams matrixT->row_offsets = new THRUSTINTARRAY32(matrixT->num_rows+1); 1254aa372e3fSPaul Mullowney matrixT->column_indices = new THRUSTINTARRAY32(a->nz); 1255aa372e3fSPaul Mullowney matrixT->values = new THRUSTARRAY(a->nz); 1256a3fdcf43SKarl Rupp 1257039c6fbaSStefano Zampini if (!cusparsestruct->rowoffsets_gpu) { cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n+1); } 125881902715SJunchao Zhang cusparsestruct->rowoffsets_gpu->assign(a->i,a->i+A->rmap->n+1); 1259afb2bd1cSJunchao Zhang 1260afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1261afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&matstructT->matDescr, 1262afb2bd1cSJunchao Zhang matrixT->num_rows, matrixT->num_cols, matrixT->num_entries, 1263afb2bd1cSJunchao Zhang matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), 1264afb2bd1cSJunchao Zhang matrixT->values->data().get(), 1265afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx type due to THRUSTINTARRAY32 */ 1266afb2bd1cSJunchao Zhang indexBase,cusparse_scalartype);CHKERRCUSPARSE(stat); 1267afb2bd1cSJunchao Zhang #endif 1268aa372e3fSPaul Mullowney } else if (cusparsestruct->format == MAT_CUSPARSE_ELL || cusparsestruct->format == MAT_CUSPARSE_HYB) { 1269afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1270afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 1271afb2bd1cSJunchao Zhang #else 1272aa372e3fSPaul Mullowney CsrMatrix *temp = new CsrMatrix; 127351c6d536SStefano Zampini CsrMatrix *tempT = new CsrMatrix; 127451c6d536SStefano Zampini /* First convert HYB to CSR */ 1275aa372e3fSPaul Mullowney temp->num_rows = A->rmap->n; 1276aa372e3fSPaul Mullowney temp->num_cols = A->cmap->n; 1277aa372e3fSPaul Mullowney temp->num_entries = a->nz; 1278aa372e3fSPaul Mullowney temp->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 1279aa372e3fSPaul Mullowney temp->column_indices = new THRUSTINTARRAY32(a->nz); 1280aa372e3fSPaul Mullowney temp->values = new THRUSTARRAY(a->nz); 1281aa372e3fSPaul Mullowney 1282aa372e3fSPaul Mullowney stat = cusparse_hyb2csr(cusparsestruct->handle, 1283aa372e3fSPaul Mullowney matstruct->descr, (cusparseHybMat_t)matstruct->mat, 1284aa372e3fSPaul Mullowney temp->values->data().get(), 1285aa372e3fSPaul Mullowney temp->row_offsets->data().get(), 128657d48284SJunchao Zhang temp->column_indices->data().get());CHKERRCUSPARSE(stat); 1287aa372e3fSPaul Mullowney 1288aa372e3fSPaul Mullowney /* Next, convert CSR to CSC (i.e. the matrix transpose) */ 1289aa372e3fSPaul Mullowney tempT->num_rows = A->rmap->n; 1290aa372e3fSPaul Mullowney tempT->num_cols = A->cmap->n; 1291aa372e3fSPaul Mullowney tempT->num_entries = a->nz; 1292aa372e3fSPaul Mullowney tempT->row_offsets = new THRUSTINTARRAY32(A->rmap->n+1); 1293aa372e3fSPaul Mullowney tempT->column_indices = new THRUSTINTARRAY32(a->nz); 1294aa372e3fSPaul Mullowney tempT->values = new THRUSTARRAY(a->nz); 1295aa372e3fSPaul Mullowney 1296aa372e3fSPaul Mullowney stat = cusparse_csr2csc(cusparsestruct->handle, temp->num_rows, 1297aa372e3fSPaul Mullowney temp->num_cols, temp->num_entries, 1298aa372e3fSPaul Mullowney temp->values->data().get(), 1299aa372e3fSPaul Mullowney temp->row_offsets->data().get(), 1300aa372e3fSPaul Mullowney temp->column_indices->data().get(), 1301aa372e3fSPaul Mullowney tempT->values->data().get(), 1302aa372e3fSPaul Mullowney tempT->column_indices->data().get(), 1303aa372e3fSPaul Mullowney tempT->row_offsets->data().get(), 130457d48284SJunchao Zhang CUSPARSE_ACTION_NUMERIC, indexBase);CHKERRCUSPARSE(stat); 1305aa372e3fSPaul Mullowney 1306aa372e3fSPaul Mullowney /* Last, convert CSC to HYB */ 1307aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 130857d48284SJunchao Zhang stat = cusparseCreateHybMat(&hybMat);CHKERRCUSPARSE(stat); 1309aa372e3fSPaul Mullowney cusparseHybPartition_t partition = cusparsestruct->format==MAT_CUSPARSE_ELL ? 1310aa372e3fSPaul Mullowney CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 1311aa372e3fSPaul Mullowney stat = cusparse_csr2hyb(cusparsestruct->handle, A->rmap->n, A->cmap->n, 1312aa372e3fSPaul Mullowney matstructT->descr, tempT->values->data().get(), 1313aa372e3fSPaul Mullowney tempT->row_offsets->data().get(), 1314aa372e3fSPaul Mullowney tempT->column_indices->data().get(), 131557d48284SJunchao Zhang hybMat, 0, partition);CHKERRCUSPARSE(stat); 1316aa372e3fSPaul Mullowney 1317aa372e3fSPaul Mullowney /* assign the pointer */ 1318aa372e3fSPaul Mullowney matstructT->mat = hybMat; 1319*a49f1ed0SStefano Zampini cusparsestruct->transupdated = PETSC_TRUE; 1320aa372e3fSPaul Mullowney /* delete temporaries */ 1321aa372e3fSPaul Mullowney if (tempT) { 1322aa372e3fSPaul Mullowney if (tempT->values) delete (THRUSTARRAY*) tempT->values; 1323aa372e3fSPaul Mullowney if (tempT->column_indices) delete (THRUSTINTARRAY32*) tempT->column_indices; 1324aa372e3fSPaul Mullowney if (tempT->row_offsets) delete (THRUSTINTARRAY32*) tempT->row_offsets; 1325aa372e3fSPaul Mullowney delete (CsrMatrix*) tempT; 1326087f3262SPaul Mullowney } 1327aa372e3fSPaul Mullowney if (temp) { 1328aa372e3fSPaul Mullowney if (temp->values) delete (THRUSTARRAY*) temp->values; 1329aa372e3fSPaul Mullowney if (temp->column_indices) delete (THRUSTINTARRAY32*) temp->column_indices; 1330aa372e3fSPaul Mullowney if (temp->row_offsets) delete (THRUSTINTARRAY32*) temp->row_offsets; 1331aa372e3fSPaul Mullowney delete (CsrMatrix*) temp; 1332aa372e3fSPaul Mullowney } 1333afb2bd1cSJunchao Zhang #endif 1334aa372e3fSPaul Mullowney } 1335*a49f1ed0SStefano Zampini } 1336*a49f1ed0SStefano Zampini if (cusparsestruct->format == MAT_CUSPARSE_CSR) { /* transpose mat struct may be already present, update data */ 1337*a49f1ed0SStefano Zampini CsrMatrix *matrix = (CsrMatrix*)matstruct->mat; 1338*a49f1ed0SStefano Zampini CsrMatrix *matrixT = (CsrMatrix*)matstructT->mat; 1339*a49f1ed0SStefano Zampini if (!matrix) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing CsrMatrix"); 1340*a49f1ed0SStefano Zampini if (!matrix->row_offsets) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing CsrMatrix rows"); 1341*a49f1ed0SStefano Zampini if (!matrix->column_indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing CsrMatrix cols"); 1342*a49f1ed0SStefano Zampini if (!matrix->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing CsrMatrix values"); 1343*a49f1ed0SStefano Zampini if (!matrixT) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing CsrMatrixT"); 1344*a49f1ed0SStefano Zampini if (!matrixT->row_offsets) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing CsrMatrixT rows"); 1345*a49f1ed0SStefano Zampini if (!matrixT->column_indices) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing CsrMatrixT cols"); 1346*a49f1ed0SStefano Zampini if (!matrixT->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing CsrMatrixT values"); 1347*a49f1ed0SStefano Zampini if (!cusparsestruct->rowoffsets_gpu) { /* this may be absent when we did not construct the transpose with csr2csc */ 1348*a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 1349*a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 1350*a49f1ed0SStefano Zampini ierr = PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 1351*a49f1ed0SStefano Zampini } 1352*a49f1ed0SStefano Zampini if (!cusparsestruct->csr2csc_i) { 1353*a49f1ed0SStefano Zampini THRUSTARRAY csr2csc_a(matrix->num_entries); 1354*a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::sequence(thrust::device, csr2csc_a.begin(), csr2csc_a.end(), 0.0)); 1355*a49f1ed0SStefano Zampini 1356*a49f1ed0SStefano Zampini indexBase = cusparseGetMatIndexBase(matstruct->descr); 1357*a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1358*a49f1ed0SStefano Zampini void *csr2cscBuffer; 1359*a49f1ed0SStefano Zampini size_t csr2cscBufferSize; 1360*a49f1ed0SStefano Zampini stat = cusparseCsr2cscEx2_bufferSize(cusparsestruct->handle, A->rmap->n, 1361*a49f1ed0SStefano Zampini A->cmap->n, matrix->num_entries, 1362*a49f1ed0SStefano Zampini matrix->values->data().get(), 1363*a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu->data().get(), 1364*a49f1ed0SStefano Zampini matrix->column_indices->data().get(), 1365*a49f1ed0SStefano Zampini matrixT->values->data().get(), 1366*a49f1ed0SStefano Zampini matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, 1367*a49f1ed0SStefano Zampini CUSPARSE_ACTION_NUMERIC,indexBase, 1368*a49f1ed0SStefano Zampini cusparsestruct->csr2cscAlg, &csr2cscBufferSize);CHKERRCUSPARSE(stat); 1369*a49f1ed0SStefano Zampini err = cudaMalloc(&csr2cscBuffer,csr2cscBufferSize);CHKERRCUDA(err); 1370*a49f1ed0SStefano Zampini #endif 1371*a49f1ed0SStefano Zampini 1372*a49f1ed0SStefano Zampini stat = cusparse_csr2csc(cusparsestruct->handle, 1373*a49f1ed0SStefano Zampini A->rmap->n,A->cmap->n,matrix->num_entries, 1374*a49f1ed0SStefano Zampini csr2csc_a.data().get(),cusparsestruct->rowoffsets_gpu->data().get(),matrix->column_indices->data().get(), 1375*a49f1ed0SStefano Zampini matrixT->values->data().get(), 1376*a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1377*a49f1ed0SStefano Zampini matrixT->row_offsets->data().get(), matrixT->column_indices->data().get(), cusparse_scalartype, 1378*a49f1ed0SStefano Zampini CUSPARSE_ACTION_NUMERIC,indexBase, 1379*a49f1ed0SStefano Zampini cusparsestruct->csr2cscAlg, csr2cscBuffer 1380*a49f1ed0SStefano Zampini #else 1381*a49f1ed0SStefano Zampini matrixT->column_indices->data().get(), matrixT->row_offsets->data().get(), 1382*a49f1ed0SStefano Zampini CUSPARSE_ACTION_NUMERIC, indexBase 1383*a49f1ed0SStefano Zampini #endif 1384*a49f1ed0SStefano Zampini );CHKERRCUSPARSE(stat); 1385*a49f1ed0SStefano Zampini cusparsestruct->csr2csc_i = new THRUSTINTARRAY(matrix->num_entries); 1386*a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::transform(thrust::device,matrixT->values->begin(),matrixT->values->end(),cusparsestruct->csr2csc_i->begin(),PetscScalarToPetscInt())); 1387*a49f1ed0SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1388*a49f1ed0SStefano Zampini err = cudaFree(csr2cscBuffer);CHKERRCUDA(err); 1389*a49f1ed0SStefano Zampini #endif 1390*a49f1ed0SStefano Zampini } 1391*a49f1ed0SStefano Zampini PetscStackCallThrust(thrust::copy(thrust::device,thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->begin()), 1392*a49f1ed0SStefano Zampini thrust::make_permutation_iterator(matrix->values->begin(), cusparsestruct->csr2csc_i->end()), 1393*a49f1ed0SStefano Zampini matrixT->values->begin())); 1394*a49f1ed0SStefano Zampini } 139585ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSEGenerateTranspose,A,0,0,0);CHKERRQ(ierr); 1396213423ffSJunchao Zhang /* the compressed row indices is not used for matTranspose */ 1397213423ffSJunchao Zhang matstructT->cprowIndices = NULL; 1398aa372e3fSPaul Mullowney /* assign the pointer */ 1399aa372e3fSPaul Mullowney ((Mat_SeqAIJCUSPARSE*)A->spptr)->matTranspose = matstructT; 1400*a49f1ed0SStefano Zampini cusparsestruct->transupdated = PETSC_TRUE; 1401bda325fcSPaul Mullowney PetscFunctionReturn(0); 1402bda325fcSPaul Mullowney } 1403bda325fcSPaul Mullowney 1404*a49f1ed0SStefano Zampini /* Why do we need to analyze the transposed matrix again? Can't we just use op(A) = CUSPARSE_OPERATION_TRANSPOSE in MatSolve_SeqAIJCUSPARSE? */ 14056fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE(Mat A,Vec bb,Vec xx) 1406bda325fcSPaul Mullowney { 1407c41cb2e2SAlejandro Lamas Daviña PetscInt n = xx->map->n; 1408465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1409465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1410465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1411465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 1412bda325fcSPaul Mullowney cusparseStatus_t stat; 1413bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1414aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1415aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1416aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1417b175d8bbSPaul Mullowney PetscErrorCode ierr; 141857d48284SJunchao Zhang cudaError_t cerr; 1419bda325fcSPaul Mullowney 1420bda325fcSPaul Mullowney PetscFunctionBegin; 1421aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1422aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 1423bda325fcSPaul Mullowney ierr = MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A);CHKERRQ(ierr); 1424aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1425aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1426bda325fcSPaul Mullowney } 1427bda325fcSPaul Mullowney 1428bda325fcSPaul Mullowney /* Get the GPU pointers */ 1429c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1430c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1431c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1432c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 1433bda325fcSPaul Mullowney 14347a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1435aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 1436c41cb2e2SAlejandro Lamas Daviña thrust::copy(thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), 1437c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(bGPU+n, cusparseTriFactors->rpermIndices->end()), 1438c41cb2e2SAlejandro Lamas Daviña xGPU); 1439aa372e3fSPaul Mullowney 1440aa372e3fSPaul Mullowney /* First, solve U */ 1441aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, 1442afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, 14431b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1444afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_entries, 1445afb2bd1cSJunchao Zhang #endif 1446afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactorT->descr, 1447aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1448aa372e3fSPaul Mullowney upTriFactorT->csrMat->row_offsets->data().get(), 1449aa372e3fSPaul Mullowney upTriFactorT->csrMat->column_indices->data().get(), 1450aa372e3fSPaul Mullowney upTriFactorT->solveInfo, 1451afb2bd1cSJunchao Zhang xarray, tempGPU->data().get() 14521b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1453afb2bd1cSJunchao Zhang ,upTriFactorT->solvePolicy, upTriFactorT->solveBuffer 1454afb2bd1cSJunchao Zhang #endif 1455afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 1456aa372e3fSPaul Mullowney 1457aa372e3fSPaul Mullowney /* Then, solve L */ 1458aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, 1459afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, 14601b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1461afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_entries, 1462afb2bd1cSJunchao Zhang #endif 1463afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactorT->descr, 1464aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1465aa372e3fSPaul Mullowney loTriFactorT->csrMat->row_offsets->data().get(), 1466aa372e3fSPaul Mullowney loTriFactorT->csrMat->column_indices->data().get(), 1467aa372e3fSPaul Mullowney loTriFactorT->solveInfo, 1468afb2bd1cSJunchao Zhang tempGPU->data().get(), xarray 14691b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1470afb2bd1cSJunchao Zhang ,loTriFactorT->solvePolicy, loTriFactorT->solveBuffer 1471afb2bd1cSJunchao Zhang #endif 1472afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 1473aa372e3fSPaul Mullowney 1474aa372e3fSPaul Mullowney /* Last, copy the solution, xGPU, into a temporary with the column permutation ... can't be done in place. */ 1475c41cb2e2SAlejandro Lamas Daviña thrust::copy(thrust::make_permutation_iterator(xGPU, cusparseTriFactors->cpermIndices->begin()), 1476c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(xGPU+n, cusparseTriFactors->cpermIndices->end()), 1477aa372e3fSPaul Mullowney tempGPU->begin()); 1478aa372e3fSPaul Mullowney 1479aa372e3fSPaul Mullowney /* Copy the temporary to the full solution. */ 1480c41cb2e2SAlejandro Lamas Daviña thrust::copy(tempGPU->begin(), tempGPU->end(), xGPU); 1481bda325fcSPaul Mullowney 1482bda325fcSPaul Mullowney /* restore */ 1483c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1484c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 148505035670SJunchao Zhang cerr = WaitForCUDA();CHKERRCUDA(cerr); 1486661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1487958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 1488bda325fcSPaul Mullowney PetscFunctionReturn(0); 1489bda325fcSPaul Mullowney } 1490bda325fcSPaul Mullowney 14916fa9248bSJed Brown static PetscErrorCode MatSolveTranspose_SeqAIJCUSPARSE_NaturalOrdering(Mat A,Vec bb,Vec xx) 1492bda325fcSPaul Mullowney { 1493465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1494465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1495bda325fcSPaul Mullowney cusparseStatus_t stat; 1496bda325fcSPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1497aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1498aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1499aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1500b175d8bbSPaul Mullowney PetscErrorCode ierr; 150157d48284SJunchao Zhang cudaError_t cerr; 1502bda325fcSPaul Mullowney 1503bda325fcSPaul Mullowney PetscFunctionBegin; 1504aa372e3fSPaul Mullowney /* Analyze the matrix and create the transpose ... on the fly */ 1505aa372e3fSPaul Mullowney if (!loTriFactorT && !upTriFactorT) { 1506bda325fcSPaul Mullowney ierr = MatSeqAIJCUSPARSEAnalyzeTransposeForSolve(A);CHKERRQ(ierr); 1507aa372e3fSPaul Mullowney loTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtrTranspose; 1508aa372e3fSPaul Mullowney upTriFactorT = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtrTranspose; 1509bda325fcSPaul Mullowney } 1510bda325fcSPaul Mullowney 1511bda325fcSPaul Mullowney /* Get the GPU pointers */ 1512c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1513c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1514bda325fcSPaul Mullowney 15157a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1516aa372e3fSPaul Mullowney /* First, solve U */ 1517aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactorT->solveOp, 1518afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_rows, 15191b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1520afb2bd1cSJunchao Zhang upTriFactorT->csrMat->num_entries, 1521afb2bd1cSJunchao Zhang #endif 1522afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactorT->descr, 1523aa372e3fSPaul Mullowney upTriFactorT->csrMat->values->data().get(), 1524aa372e3fSPaul Mullowney upTriFactorT->csrMat->row_offsets->data().get(), 1525aa372e3fSPaul Mullowney upTriFactorT->csrMat->column_indices->data().get(), 1526aa372e3fSPaul Mullowney upTriFactorT->solveInfo, 1527afb2bd1cSJunchao Zhang barray, tempGPU->data().get() 15281b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1529afb2bd1cSJunchao Zhang ,upTriFactorT->solvePolicy, upTriFactorT->solveBuffer 1530afb2bd1cSJunchao Zhang #endif 1531afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 1532aa372e3fSPaul Mullowney 1533aa372e3fSPaul Mullowney /* Then, solve L */ 1534aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactorT->solveOp, 1535afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_rows, 15361b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1537afb2bd1cSJunchao Zhang loTriFactorT->csrMat->num_entries, 1538afb2bd1cSJunchao Zhang #endif 1539afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactorT->descr, 1540aa372e3fSPaul Mullowney loTriFactorT->csrMat->values->data().get(), 1541aa372e3fSPaul Mullowney loTriFactorT->csrMat->row_offsets->data().get(), 1542aa372e3fSPaul Mullowney loTriFactorT->csrMat->column_indices->data().get(), 1543aa372e3fSPaul Mullowney loTriFactorT->solveInfo, 1544afb2bd1cSJunchao Zhang tempGPU->data().get(), xarray 15451b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1546afb2bd1cSJunchao Zhang ,loTriFactorT->solvePolicy, loTriFactorT->solveBuffer 1547afb2bd1cSJunchao Zhang #endif 1548afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 1549bda325fcSPaul Mullowney 1550bda325fcSPaul Mullowney /* restore */ 1551c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1552c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 155305035670SJunchao Zhang cerr = WaitForCUDA();CHKERRCUDA(cerr); 1554661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1555958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 1556bda325fcSPaul Mullowney PetscFunctionReturn(0); 1557bda325fcSPaul Mullowney } 1558bda325fcSPaul Mullowney 15596fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE(Mat A,Vec bb,Vec xx) 15609ae82921SPaul Mullowney { 1561465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1562465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 1563465f34aeSAlejandro Lamas Daviña thrust::device_ptr<const PetscScalar> bGPU; 1564465f34aeSAlejandro Lamas Daviña thrust::device_ptr<PetscScalar> xGPU; 15659ae82921SPaul Mullowney cusparseStatus_t stat; 15669ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1567aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1568aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1569aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1570b175d8bbSPaul Mullowney PetscErrorCode ierr; 157157d48284SJunchao Zhang cudaError_t cerr; 15729ae82921SPaul Mullowney 15739ae82921SPaul Mullowney PetscFunctionBegin; 1574ebc8f436SDominic Meiser 1575e057df02SPaul Mullowney /* Get the GPU pointers */ 1576c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1577c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 1578c41cb2e2SAlejandro Lamas Daviña xGPU = thrust::device_pointer_cast(xarray); 1579c41cb2e2SAlejandro Lamas Daviña bGPU = thrust::device_pointer_cast(barray); 15809ae82921SPaul Mullowney 15817a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1582aa372e3fSPaul Mullowney /* First, reorder with the row permutation */ 1583c41cb2e2SAlejandro Lamas Daviña thrust::copy(thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->begin()), 1584c41cb2e2SAlejandro Lamas Daviña thrust::make_permutation_iterator(bGPU, cusparseTriFactors->rpermIndices->end()), 15854e4bbfaaSStefano Zampini tempGPU->begin()); 1586aa372e3fSPaul Mullowney 1587aa372e3fSPaul Mullowney /* Next, solve L */ 1588aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactor->solveOp, 1589afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, 15901b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1591afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_entries, 1592afb2bd1cSJunchao Zhang #endif 1593afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactor->descr, 1594aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1595aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1596aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1597aa372e3fSPaul Mullowney loTriFactor->solveInfo, 1598afb2bd1cSJunchao Zhang tempGPU->data().get(), xarray 15991b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1600afb2bd1cSJunchao Zhang ,loTriFactor->solvePolicy, loTriFactor->solveBuffer 1601afb2bd1cSJunchao Zhang #endif 1602afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 1603aa372e3fSPaul Mullowney 1604aa372e3fSPaul Mullowney /* Then, solve U */ 1605aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactor->solveOp, 1606afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, 16071b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1608afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_entries, 1609afb2bd1cSJunchao Zhang #endif 1610afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactor->descr, 1611aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1612aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1613aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1614aa372e3fSPaul Mullowney upTriFactor->solveInfo, 1615afb2bd1cSJunchao Zhang xarray, tempGPU->data().get() 16161b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1617afb2bd1cSJunchao Zhang ,upTriFactor->solvePolicy, upTriFactor->solveBuffer 1618afb2bd1cSJunchao Zhang #endif 1619afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 1620aa372e3fSPaul Mullowney 16214e4bbfaaSStefano Zampini /* Last, reorder with the column permutation */ 16224e4bbfaaSStefano Zampini thrust::copy(thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->begin()), 16234e4bbfaaSStefano Zampini thrust::make_permutation_iterator(tempGPU->begin(), cusparseTriFactors->cpermIndices->end()), 16244e4bbfaaSStefano Zampini xGPU); 16259ae82921SPaul Mullowney 1626c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1627c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 162805035670SJunchao Zhang cerr = WaitForCUDA();CHKERRCUDA(cerr); 1629661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1630958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 16319ae82921SPaul Mullowney PetscFunctionReturn(0); 16329ae82921SPaul Mullowney } 16339ae82921SPaul Mullowney 16346fa9248bSJed Brown static PetscErrorCode MatSolve_SeqAIJCUSPARSE_NaturalOrdering(Mat A,Vec bb,Vec xx) 16359ae82921SPaul Mullowney { 1636465f34aeSAlejandro Lamas Daviña const PetscScalar *barray; 1637465f34aeSAlejandro Lamas Daviña PetscScalar *xarray; 16389ae82921SPaul Mullowney cusparseStatus_t stat; 16399ae82921SPaul Mullowney Mat_SeqAIJCUSPARSETriFactors *cusparseTriFactors = (Mat_SeqAIJCUSPARSETriFactors*)A->spptr; 1640aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *loTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->loTriFactorPtr; 1641aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSETriFactorStruct *upTriFactor = (Mat_SeqAIJCUSPARSETriFactorStruct*)cusparseTriFactors->upTriFactorPtr; 1642aa372e3fSPaul Mullowney THRUSTARRAY *tempGPU = (THRUSTARRAY*)cusparseTriFactors->workVector; 1643b175d8bbSPaul Mullowney PetscErrorCode ierr; 164457d48284SJunchao Zhang cudaError_t cerr; 16459ae82921SPaul Mullowney 16469ae82921SPaul Mullowney PetscFunctionBegin; 1647e057df02SPaul Mullowney /* Get the GPU pointers */ 1648c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayWrite(xx,&xarray);CHKERRQ(ierr); 1649c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDAGetArrayRead(bb,&barray);CHKERRQ(ierr); 16509ae82921SPaul Mullowney 16517a052e47Shannah_mairs ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 1652aa372e3fSPaul Mullowney /* First, solve L */ 1653aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, loTriFactor->solveOp, 1654afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_rows, 16551b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1656afb2bd1cSJunchao Zhang loTriFactor->csrMat->num_entries, 1657afb2bd1cSJunchao Zhang #endif 1658afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, loTriFactor->descr, 1659aa372e3fSPaul Mullowney loTriFactor->csrMat->values->data().get(), 1660aa372e3fSPaul Mullowney loTriFactor->csrMat->row_offsets->data().get(), 1661aa372e3fSPaul Mullowney loTriFactor->csrMat->column_indices->data().get(), 1662aa372e3fSPaul Mullowney loTriFactor->solveInfo, 1663afb2bd1cSJunchao Zhang barray, tempGPU->data().get() 16641b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1665afb2bd1cSJunchao Zhang ,loTriFactor->solvePolicy, loTriFactor->solveBuffer 1666afb2bd1cSJunchao Zhang #endif 1667afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 1668aa372e3fSPaul Mullowney 1669aa372e3fSPaul Mullowney /* Next, solve U */ 1670aa372e3fSPaul Mullowney stat = cusparse_solve(cusparseTriFactors->handle, upTriFactor->solveOp, 1671afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_rows, 16721b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1673afb2bd1cSJunchao Zhang upTriFactor->csrMat->num_entries, 1674afb2bd1cSJunchao Zhang #endif 1675afb2bd1cSJunchao Zhang &PETSC_CUSPARSE_ONE, upTriFactor->descr, 1676aa372e3fSPaul Mullowney upTriFactor->csrMat->values->data().get(), 1677aa372e3fSPaul Mullowney upTriFactor->csrMat->row_offsets->data().get(), 1678aa372e3fSPaul Mullowney upTriFactor->csrMat->column_indices->data().get(), 1679aa372e3fSPaul Mullowney upTriFactor->solveInfo, 1680afb2bd1cSJunchao Zhang tempGPU->data().get(), xarray 16811b0a6780SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(9,0,0) 1682afb2bd1cSJunchao Zhang ,upTriFactor->solvePolicy, upTriFactor->solveBuffer 1683afb2bd1cSJunchao Zhang #endif 1684afb2bd1cSJunchao Zhang );CHKERRCUSPARSE(stat); 16859ae82921SPaul Mullowney 1686c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayRead(bb,&barray);CHKERRQ(ierr); 1687c41cb2e2SAlejandro Lamas Daviña ierr = VecCUDARestoreArrayWrite(xx,&xarray);CHKERRQ(ierr); 168805035670SJunchao Zhang cerr = WaitForCUDA();CHKERRCUDA(cerr); 1689661c2d29Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 1690958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*cusparseTriFactors->nnz - A->cmap->n);CHKERRQ(ierr); 16919ae82921SPaul Mullowney PetscFunctionReturn(0); 16929ae82921SPaul Mullowney } 16939ae82921SPaul Mullowney 16947e8381f9SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSECopyFromGPU(Mat A) 16957e8381f9SStefano Zampini { 16967e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 16977e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 16987e8381f9SStefano Zampini cudaError_t cerr; 16997e8381f9SStefano Zampini PetscErrorCode ierr; 17007e8381f9SStefano Zampini 17017e8381f9SStefano Zampini PetscFunctionBegin; 17027e8381f9SStefano Zampini if (A->offloadmask == PETSC_OFFLOAD_GPU) { 17037e8381f9SStefano Zampini CsrMatrix *matrix = (CsrMatrix*)cusp->mat->mat; 17047e8381f9SStefano Zampini 17057e8381f9SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyFromGPU,A,0,0,0);CHKERRQ(ierr); 17067e8381f9SStefano Zampini cerr = cudaMemcpy(a->a, matrix->values->data().get(), a->nz*sizeof(PetscScalar), cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 17077e8381f9SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 17087e8381f9SStefano Zampini ierr = PetscLogGpuToCpu(a->nz*sizeof(PetscScalar));CHKERRQ(ierr); 17097e8381f9SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyFromGPU,A,0,0,0);CHKERRQ(ierr); 17107e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_BOTH; 17117e8381f9SStefano Zampini } 17127e8381f9SStefano Zampini PetscFunctionReturn(0); 17137e8381f9SStefano Zampini } 17147e8381f9SStefano Zampini 17157e8381f9SStefano Zampini static PetscErrorCode MatSeqAIJGetArray_SeqAIJCUSPARSE(Mat A,PetscScalar *array[]) 17167e8381f9SStefano Zampini { 17177e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 17187e8381f9SStefano Zampini PetscErrorCode ierr; 17197e8381f9SStefano Zampini 17207e8381f9SStefano Zampini PetscFunctionBegin; 17217e8381f9SStefano Zampini ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 17227e8381f9SStefano Zampini *array = a->a; 17237e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 17247e8381f9SStefano Zampini PetscFunctionReturn(0); 17257e8381f9SStefano Zampini } 17267e8381f9SStefano Zampini 17276fa9248bSJed Brown static PetscErrorCode MatSeqAIJCUSPARSECopyToGPU(Mat A) 17289ae82921SPaul Mullowney { 1729aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 17307c700b8dSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *matstruct = cusparsestruct->mat; 17319ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 1732213423ffSJunchao Zhang PetscInt m = A->rmap->n,*ii,*ridx,tmp; 17339ae82921SPaul Mullowney PetscErrorCode ierr; 1734aa372e3fSPaul Mullowney cusparseStatus_t stat; 1735abb89eb1SStefano Zampini PetscBool both = PETSC_TRUE; 1736b06137fdSPaul Mullowney cudaError_t err; 17379ae82921SPaul Mullowney 17389ae82921SPaul Mullowney PetscFunctionBegin; 1739fcdce8c4SStefano Zampini if (A->boundtocpu) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Cannot copy to GPU"); 1740c70f7ee4SJunchao Zhang if (A->offloadmask == PETSC_OFFLOAD_UNALLOCATED || A->offloadmask == PETSC_OFFLOAD_CPU) { 1741*a49f1ed0SStefano Zampini if (A->nonzerostate == cusparsestruct->nonzerostate && cusparsestruct->format == MAT_CUSPARSE_CSR) { /* Copy values only */ 1742*a49f1ed0SStefano Zampini CsrMatrix *matrix; 1743afb2bd1cSJunchao Zhang matrix = (CsrMatrix*)cusparsestruct->mat->mat; 174485ba7357SStefano Zampini 1745abb89eb1SStefano Zampini if (a->nz && !a->a) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing CSR values"); 174685ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 1747afb2bd1cSJunchao Zhang matrix->values->assign(a->a, a->a+a->nz); 174805035670SJunchao Zhang err = WaitForCUDA();CHKERRCUDA(err); 17494863603aSSatish Balay ierr = PetscLogCpuToGpu((a->nz)*sizeof(PetscScalar));CHKERRQ(ierr); 175085ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 1751*a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 175234d6c7a5SJose E. Roman } else { 1753abb89eb1SStefano Zampini PetscInt nnz; 175485ba7357SStefano Zampini ierr = PetscLogEventBegin(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 17557c700b8dSJunchao Zhang ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&cusparsestruct->mat,cusparsestruct->format);CHKERRQ(ierr); 1756*a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 17577c700b8dSJunchao Zhang delete cusparsestruct->workVector; 175881902715SJunchao Zhang delete cusparsestruct->rowoffsets_gpu; 1759*a49f1ed0SStefano Zampini cusparsestruct->workVector = NULL; 1760*a49f1ed0SStefano Zampini cusparsestruct->rowoffsets_gpu = NULL; 17619ae82921SPaul Mullowney try { 17629ae82921SPaul Mullowney if (a->compressedrow.use) { 17639ae82921SPaul Mullowney m = a->compressedrow.nrows; 17649ae82921SPaul Mullowney ii = a->compressedrow.i; 17659ae82921SPaul Mullowney ridx = a->compressedrow.rindex; 17669ae82921SPaul Mullowney } else { 1767213423ffSJunchao Zhang m = A->rmap->n; 1768213423ffSJunchao Zhang ii = a->i; 1769e6e9a74fSStefano Zampini ridx = NULL; 17709ae82921SPaul Mullowney } 1771abb89eb1SStefano Zampini if (!ii) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing CSR row data"); 1772abb89eb1SStefano Zampini if (m && !a->j) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing CSR column data"); 1773abb89eb1SStefano Zampini if (!a->a) { nnz = ii[m]; both = PETSC_FALSE; } 1774abb89eb1SStefano Zampini else nnz = a->nz; 17759ae82921SPaul Mullowney 177685ba7357SStefano Zampini /* create cusparse matrix */ 1777abb89eb1SStefano Zampini cusparsestruct->nrows = m; 1778aa372e3fSPaul Mullowney matstruct = new Mat_SeqAIJCUSPARSEMultStruct; 177957d48284SJunchao Zhang stat = cusparseCreateMatDescr(&matstruct->descr);CHKERRCUSPARSE(stat); 178057d48284SJunchao Zhang stat = cusparseSetMatIndexBase(matstruct->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 178157d48284SJunchao Zhang stat = cusparseSetMatType(matstruct->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 17829ae82921SPaul Mullowney 1783afb2bd1cSJunchao Zhang err = cudaMalloc((void **)&(matstruct->alpha_one),sizeof(PetscScalar));CHKERRCUDA(err); 17847656d835SStefano Zampini err = cudaMalloc((void **)&(matstruct->beta_zero),sizeof(PetscScalar));CHKERRCUDA(err); 17857656d835SStefano Zampini err = cudaMalloc((void **)&(matstruct->beta_one), sizeof(PetscScalar));CHKERRCUDA(err); 1786afb2bd1cSJunchao Zhang err = cudaMemcpy(matstruct->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 17877656d835SStefano Zampini err = cudaMemcpy(matstruct->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 17887656d835SStefano Zampini err = cudaMemcpy(matstruct->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(err); 178957d48284SJunchao Zhang stat = cusparseSetPointerMode(cusparsestruct->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 1790b06137fdSPaul Mullowney 1791aa372e3fSPaul Mullowney /* Build a hybrid/ellpack matrix if this option is chosen for the storage */ 1792aa372e3fSPaul Mullowney if (cusparsestruct->format==MAT_CUSPARSE_CSR) { 1793aa372e3fSPaul Mullowney /* set the matrix */ 1794afb2bd1cSJunchao Zhang CsrMatrix *mat= new CsrMatrix; 1795afb2bd1cSJunchao Zhang mat->num_rows = m; 1796afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 1797abb89eb1SStefano Zampini mat->num_entries = nnz; 1798afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m+1); 1799afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m+1); 18009ae82921SPaul Mullowney 1801abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 1802abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j+nnz); 1803aa372e3fSPaul Mullowney 1804abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 1805abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a+nnz); 1806aa372e3fSPaul Mullowney 1807aa372e3fSPaul Mullowney /* assign the pointer */ 1808afb2bd1cSJunchao Zhang matstruct->mat = mat; 1809afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1810afb2bd1cSJunchao Zhang if (mat->num_rows) { /* cusparse errors on empty matrices! */ 1811afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&matstruct->matDescr, 1812afb2bd1cSJunchao Zhang mat->num_rows, mat->num_cols, mat->num_entries, 1813afb2bd1cSJunchao Zhang mat->row_offsets->data().get(), mat->column_indices->data().get(), 1814afb2bd1cSJunchao Zhang mat->values->data().get(), 1815afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 1816afb2bd1cSJunchao Zhang CUSPARSE_INDEX_BASE_ZERO,cusparse_scalartype);CHKERRCUSPARSE(stat); 1817afb2bd1cSJunchao Zhang } 1818afb2bd1cSJunchao Zhang #endif 1819aa372e3fSPaul Mullowney } else if (cusparsestruct->format==MAT_CUSPARSE_ELL || cusparsestruct->format==MAT_CUSPARSE_HYB) { 1820afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1821afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 1822afb2bd1cSJunchao Zhang #else 1823afb2bd1cSJunchao Zhang CsrMatrix *mat= new CsrMatrix; 1824afb2bd1cSJunchao Zhang mat->num_rows = m; 1825afb2bd1cSJunchao Zhang mat->num_cols = A->cmap->n; 1826abb89eb1SStefano Zampini mat->num_entries = nnz; 1827afb2bd1cSJunchao Zhang mat->row_offsets = new THRUSTINTARRAY32(m+1); 1828afb2bd1cSJunchao Zhang mat->row_offsets->assign(ii, ii + m+1); 1829aa372e3fSPaul Mullowney 1830abb89eb1SStefano Zampini mat->column_indices = new THRUSTINTARRAY32(nnz); 1831abb89eb1SStefano Zampini mat->column_indices->assign(a->j, a->j+nnz); 1832aa372e3fSPaul Mullowney 1833abb89eb1SStefano Zampini mat->values = new THRUSTARRAY(nnz); 1834abb89eb1SStefano Zampini if (a->a) mat->values->assign(a->a, a->a+nnz); 1835aa372e3fSPaul Mullowney 1836aa372e3fSPaul Mullowney cusparseHybMat_t hybMat; 183757d48284SJunchao Zhang stat = cusparseCreateHybMat(&hybMat);CHKERRCUSPARSE(stat); 1838aa372e3fSPaul Mullowney cusparseHybPartition_t partition = cusparsestruct->format==MAT_CUSPARSE_ELL ? 1839aa372e3fSPaul Mullowney CUSPARSE_HYB_PARTITION_MAX : CUSPARSE_HYB_PARTITION_AUTO; 1840afb2bd1cSJunchao Zhang stat = cusparse_csr2hyb(cusparsestruct->handle, mat->num_rows, mat->num_cols, 1841afb2bd1cSJunchao Zhang matstruct->descr, mat->values->data().get(), 1842afb2bd1cSJunchao Zhang mat->row_offsets->data().get(), 1843afb2bd1cSJunchao Zhang mat->column_indices->data().get(), 184457d48284SJunchao Zhang hybMat, 0, partition);CHKERRCUSPARSE(stat); 1845aa372e3fSPaul Mullowney /* assign the pointer */ 1846aa372e3fSPaul Mullowney matstruct->mat = hybMat; 1847aa372e3fSPaul Mullowney 1848afb2bd1cSJunchao Zhang if (mat) { 1849afb2bd1cSJunchao Zhang if (mat->values) delete (THRUSTARRAY*)mat->values; 1850afb2bd1cSJunchao Zhang if (mat->column_indices) delete (THRUSTINTARRAY32*)mat->column_indices; 1851afb2bd1cSJunchao Zhang if (mat->row_offsets) delete (THRUSTINTARRAY32*)mat->row_offsets; 1852afb2bd1cSJunchao Zhang delete (CsrMatrix*)mat; 1853087f3262SPaul Mullowney } 1854afb2bd1cSJunchao Zhang #endif 1855087f3262SPaul Mullowney } 1856ca45077fSPaul Mullowney 1857aa372e3fSPaul Mullowney /* assign the compressed row indices */ 1858213423ffSJunchao Zhang if (a->compressedrow.use) { 1859213423ffSJunchao Zhang cusparsestruct->workVector = new THRUSTARRAY(m); 1860aa372e3fSPaul Mullowney matstruct->cprowIndices = new THRUSTINTARRAY(m); 1861aa372e3fSPaul Mullowney matstruct->cprowIndices->assign(ridx,ridx+m); 1862213423ffSJunchao Zhang tmp = m; 1863213423ffSJunchao Zhang } else { 1864213423ffSJunchao Zhang cusparsestruct->workVector = NULL; 1865213423ffSJunchao Zhang matstruct->cprowIndices = NULL; 1866213423ffSJunchao Zhang tmp = 0; 1867213423ffSJunchao Zhang } 1868213423ffSJunchao Zhang ierr = PetscLogCpuToGpu(((m+1)+(a->nz))*sizeof(int)+tmp*sizeof(PetscInt)+(3+(a->nz))*sizeof(PetscScalar));CHKERRQ(ierr); 1869aa372e3fSPaul Mullowney 1870aa372e3fSPaul Mullowney /* assign the pointer */ 1871aa372e3fSPaul Mullowney cusparsestruct->mat = matstruct; 18729ae82921SPaul Mullowney } catch(char *ex) { 18739ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 18749ae82921SPaul Mullowney } 187505035670SJunchao Zhang err = WaitForCUDA();CHKERRCUDA(err); 187685ba7357SStefano Zampini ierr = PetscLogEventEnd(MAT_CUSPARSECopyToGPU,A,0,0,0);CHKERRQ(ierr); 187734d6c7a5SJose E. Roman cusparsestruct->nonzerostate = A->nonzerostate; 187834d6c7a5SJose E. Roman } 1879abb89eb1SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 18809ae82921SPaul Mullowney } 18819ae82921SPaul Mullowney PetscFunctionReturn(0); 18829ae82921SPaul Mullowney } 18839ae82921SPaul Mullowney 1884c41cb2e2SAlejandro Lamas Daviña struct VecCUDAPlusEquals 1885aa372e3fSPaul Mullowney { 1886aa372e3fSPaul Mullowney template <typename Tuple> 1887aa372e3fSPaul Mullowney __host__ __device__ 1888aa372e3fSPaul Mullowney void operator()(Tuple t) 1889aa372e3fSPaul Mullowney { 1890aa372e3fSPaul Mullowney thrust::get<1>(t) = thrust::get<1>(t) + thrust::get<0>(t); 1891aa372e3fSPaul Mullowney } 1892aa372e3fSPaul Mullowney }; 1893aa372e3fSPaul Mullowney 18947e8381f9SStefano Zampini struct VecCUDAEquals 18957e8381f9SStefano Zampini { 18967e8381f9SStefano Zampini template <typename Tuple> 18977e8381f9SStefano Zampini __host__ __device__ 18987e8381f9SStefano Zampini void operator()(Tuple t) 18997e8381f9SStefano Zampini { 19007e8381f9SStefano Zampini thrust::get<1>(t) = thrust::get<0>(t); 19017e8381f9SStefano Zampini } 19027e8381f9SStefano Zampini }; 19037e8381f9SStefano Zampini 1904e6e9a74fSStefano Zampini struct VecCUDAEqualsReverse 1905e6e9a74fSStefano Zampini { 1906e6e9a74fSStefano Zampini template <typename Tuple> 1907e6e9a74fSStefano Zampini __host__ __device__ 1908e6e9a74fSStefano Zampini void operator()(Tuple t) 1909e6e9a74fSStefano Zampini { 1910e6e9a74fSStefano Zampini thrust::get<0>(t) = thrust::get<1>(t); 1911e6e9a74fSStefano Zampini } 1912e6e9a74fSStefano Zampini }; 1913e6e9a74fSStefano Zampini 1914afb2bd1cSJunchao Zhang struct MatMatCusparse { 1915ccdfe979SStefano Zampini PetscBool cisdense; 1916ccdfe979SStefano Zampini PetscScalar *Bt; 1917ccdfe979SStefano Zampini Mat X; 1918fcdce8c4SStefano Zampini PetscBool reusesym; /* Cusparse does not have split symbolic and numeric phases for sparse matmat operations */ 1919fcdce8c4SStefano Zampini PetscLogDouble flops; 1920fcdce8c4SStefano Zampini CsrMatrix *Bcsr; 1921afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1922fcdce8c4SStefano Zampini cusparseSpMatDescr_t matSpBDescr; 1923afb2bd1cSJunchao Zhang PetscBool initialized; /* C = alpha op(A) op(B) + beta C */ 1924afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matBDescr; 1925afb2bd1cSJunchao Zhang cusparseDnMatDescr_t matCDescr; 1926afb2bd1cSJunchao Zhang PetscInt Blda,Clda; /* Record leading dimensions of B and C here to detect changes*/ 1927fcdce8c4SStefano Zampini size_t mmBufferSize; 1928fcdce8c4SStefano Zampini void *mmBuffer; 1929fcdce8c4SStefano Zampini void *mmBuffer2; /* SpGEMM WorkEstimation buffer */ 1930fcdce8c4SStefano Zampini cusparseSpGEMMDescr_t spgemmDesc; 1931afb2bd1cSJunchao Zhang #endif 1932afb2bd1cSJunchao Zhang }; 1933ccdfe979SStefano Zampini 1934ccdfe979SStefano Zampini static PetscErrorCode MatDestroy_MatMatCusparse(void *data) 1935ccdfe979SStefano Zampini { 1936ccdfe979SStefano Zampini PetscErrorCode ierr; 1937ccdfe979SStefano Zampini MatMatCusparse *mmdata = (MatMatCusparse *)data; 1938ccdfe979SStefano Zampini cudaError_t cerr; 1939fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1940fcdce8c4SStefano Zampini cusparseStatus_t stat; 1941fcdce8c4SStefano Zampini #endif 1942ccdfe979SStefano Zampini 1943ccdfe979SStefano Zampini PetscFunctionBegin; 1944ccdfe979SStefano Zampini cerr = cudaFree(mmdata->Bt);CHKERRCUDA(cerr); 1945fcdce8c4SStefano Zampini delete mmdata->Bcsr; 1946afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 1947fcdce8c4SStefano Zampini if (mmdata->matSpBDescr) { stat = cusparseDestroySpMat(mmdata->matSpBDescr);CHKERRCUSPARSE(stat); } 1948fcdce8c4SStefano Zampini if (mmdata->mmBuffer) { cerr = cudaFree(mmdata->mmBuffer);CHKERRCUDA(cerr); } 1949fcdce8c4SStefano Zampini if (mmdata->mmBuffer2) { cerr = cudaFree(mmdata->mmBuffer2);CHKERRCUDA(cerr); } 1950afb2bd1cSJunchao Zhang if (mmdata->matBDescr) { stat = cusparseDestroyDnMat(mmdata->matBDescr);CHKERRCUSPARSE(stat); } 1951afb2bd1cSJunchao Zhang if (mmdata->matCDescr) { stat = cusparseDestroyDnMat(mmdata->matCDescr);CHKERRCUSPARSE(stat); } 1952fcdce8c4SStefano Zampini if (mmdata->spgemmDesc) { stat = cusparseSpGEMM_destroyDescr(mmdata->spgemmDesc);CHKERRCUSPARSE(stat); } 1953afb2bd1cSJunchao Zhang #endif 1954ccdfe979SStefano Zampini ierr = MatDestroy(&mmdata->X);CHKERRQ(ierr); 1955ccdfe979SStefano Zampini ierr = PetscFree(data);CHKERRQ(ierr); 1956ccdfe979SStefano Zampini PetscFunctionReturn(0); 1957ccdfe979SStefano Zampini } 1958ccdfe979SStefano Zampini 1959ccdfe979SStefano Zampini PETSC_INTERN PetscErrorCode MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(Mat,Mat,Mat,PetscBool,PetscBool); 1960ccdfe979SStefano Zampini 1961ccdfe979SStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 1962ccdfe979SStefano Zampini { 1963ccdfe979SStefano Zampini Mat_Product *product = C->product; 1964ccdfe979SStefano Zampini Mat A,B; 1965afb2bd1cSJunchao Zhang PetscInt m,n,blda,clda; 1966ccdfe979SStefano Zampini PetscBool flg,biscuda; 1967ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 1968ccdfe979SStefano Zampini cusparseStatus_t stat; 1969ccdfe979SStefano Zampini cusparseOperation_t opA; 1970ccdfe979SStefano Zampini const PetscScalar *barray; 1971ccdfe979SStefano Zampini PetscScalar *carray; 1972ccdfe979SStefano Zampini PetscErrorCode ierr; 1973ccdfe979SStefano Zampini MatMatCusparse *mmdata; 1974ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *mat; 1975ccdfe979SStefano Zampini CsrMatrix *csrmat; 1976afb2bd1cSJunchao Zhang cudaError_t cerr; 1977ccdfe979SStefano Zampini 1978ccdfe979SStefano Zampini PetscFunctionBegin; 1979ccdfe979SStefano Zampini MatCheckProduct(C,1); 1980ccdfe979SStefano Zampini if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty"); 1981ccdfe979SStefano Zampini mmdata = (MatMatCusparse*)product->data; 1982ccdfe979SStefano Zampini A = product->A; 1983ccdfe979SStefano Zampini B = product->B; 1984ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 1985ccdfe979SStefano Zampini if (!flg) SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Not for type %s",((PetscObject)A)->type_name); 1986ccdfe979SStefano Zampini /* currently CopyToGpu does not copy if the matrix is bound to CPU 1987ccdfe979SStefano Zampini Instead of silently accepting the wrong answer, I prefer to raise the error */ 1988ccdfe979SStefano Zampini if (A->boundtocpu) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 1989ccdfe979SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 1990ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 1991ccdfe979SStefano Zampini switch (product->type) { 1992ccdfe979SStefano Zampini case MATPRODUCT_AB: 1993ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 1994ccdfe979SStefano Zampini mat = cusp->mat; 1995ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 1996ccdfe979SStefano Zampini m = A->rmap->n; 1997ccdfe979SStefano Zampini n = B->cmap->n; 1998ccdfe979SStefano Zampini break; 1999ccdfe979SStefano Zampini case MATPRODUCT_AtB: 2000e6e9a74fSStefano Zampini if (!cusp->transgen) { 2001e6e9a74fSStefano Zampini mat = cusp->mat; 2002e6e9a74fSStefano Zampini opA = CUSPARSE_OPERATION_TRANSPOSE; 2003e6e9a74fSStefano Zampini } else { 2004ccdfe979SStefano Zampini ierr = MatSeqAIJCUSPARSEGenerateTransposeForMult(A);CHKERRQ(ierr); 2005ccdfe979SStefano Zampini mat = cusp->matTranspose; 2006ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2007e6e9a74fSStefano Zampini } 2008ccdfe979SStefano Zampini m = A->cmap->n; 2009ccdfe979SStefano Zampini n = B->cmap->n; 2010ccdfe979SStefano Zampini break; 2011ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2012ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2013ccdfe979SStefano Zampini mat = cusp->mat; 2014ccdfe979SStefano Zampini opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2015ccdfe979SStefano Zampini m = A->rmap->n; 2016ccdfe979SStefano Zampini n = B->rmap->n; 2017ccdfe979SStefano Zampini break; 2018ccdfe979SStefano Zampini default: 2019ccdfe979SStefano Zampini SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Unsupported product type %s",MatProductTypes[product->type]); 2020ccdfe979SStefano Zampini } 2021ccdfe979SStefano Zampini if (!mat) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 2022ccdfe979SStefano Zampini csrmat = (CsrMatrix*)mat->mat; 2023ccdfe979SStefano Zampini /* if the user passed a CPU matrix, copy the data to the GPU */ 2024ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQDENSECUDA,&biscuda);CHKERRQ(ierr); 2025afb2bd1cSJunchao Zhang if (!biscuda) {ierr = MatConvert(B,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr);} 2026ccdfe979SStefano Zampini ierr = MatDenseCUDAGetArrayRead(B,&barray);CHKERRQ(ierr); 2027afb2bd1cSJunchao Zhang 2028ccdfe979SStefano Zampini ierr = MatDenseGetLDA(B,&blda);CHKERRQ(ierr); 2029c8378d12SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 2030c8378d12SStefano Zampini ierr = MatDenseCUDAGetArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2031c8378d12SStefano Zampini ierr = MatDenseGetLDA(mmdata->X,&clda);CHKERRQ(ierr); 2032c8378d12SStefano Zampini } else { 2033c8378d12SStefano Zampini ierr = MatDenseCUDAGetArrayWrite(C,&carray);CHKERRQ(ierr); 2034c8378d12SStefano Zampini ierr = MatDenseGetLDA(C,&clda);CHKERRQ(ierr); 2035c8378d12SStefano Zampini } 2036c8378d12SStefano Zampini 2037c8378d12SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2038afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2039afb2bd1cSJunchao Zhang cusparseOperation_t opB = (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) ? CUSPARSE_OPERATION_TRANSPOSE : CUSPARSE_OPERATION_NON_TRANSPOSE; 2040fcdce8c4SStefano Zampini /* (re)allcoate mmBuffer if not initialized or LDAs are different */ 2041afb2bd1cSJunchao Zhang if (!mmdata->initialized || mmdata->Blda != blda || mmdata->Clda != clda) { 2042fcdce8c4SStefano Zampini size_t mmBufferSize; 2043afb2bd1cSJunchao Zhang if (mmdata->initialized && mmdata->Blda != blda) {stat = cusparseDestroyDnMat(mmdata->matBDescr);CHKERRCUSPARSE(stat); mmdata->matBDescr = NULL;} 2044afb2bd1cSJunchao Zhang if (!mmdata->matBDescr) { 2045afb2bd1cSJunchao Zhang stat = cusparseCreateDnMat(&mmdata->matBDescr,B->rmap->n,B->cmap->n,blda,(void*)barray,cusparse_scalartype,CUSPARSE_ORDER_COL);CHKERRCUSPARSE(stat); 2046afb2bd1cSJunchao Zhang mmdata->Blda = blda; 2047afb2bd1cSJunchao Zhang } 2048c8378d12SStefano Zampini 2049afb2bd1cSJunchao Zhang if (mmdata->initialized && mmdata->Clda != clda) {stat = cusparseDestroyDnMat(mmdata->matCDescr);CHKERRCUSPARSE(stat); mmdata->matCDescr = NULL;} 2050afb2bd1cSJunchao Zhang if (!mmdata->matCDescr) { /* matCDescr is for C or mmdata->X */ 2051afb2bd1cSJunchao Zhang stat = cusparseCreateDnMat(&mmdata->matCDescr,m,n,clda,(void*)carray,cusparse_scalartype,CUSPARSE_ORDER_COL);CHKERRCUSPARSE(stat); 2052afb2bd1cSJunchao Zhang mmdata->Clda = clda; 2053afb2bd1cSJunchao Zhang } 2054afb2bd1cSJunchao Zhang 2055afb2bd1cSJunchao Zhang if (!mat->matDescr) { 2056afb2bd1cSJunchao Zhang stat = cusparseCreateCsr(&mat->matDescr, 2057afb2bd1cSJunchao Zhang csrmat->num_rows, csrmat->num_cols, csrmat->num_entries, 2058afb2bd1cSJunchao Zhang csrmat->row_offsets->data().get(), csrmat->column_indices->data().get(), 2059afb2bd1cSJunchao Zhang csrmat->values->data().get(), 2060afb2bd1cSJunchao Zhang CUSPARSE_INDEX_32I,CUSPARSE_INDEX_32I, /* row offset, col idx types due to THRUSTINTARRAY32 */ 2061afb2bd1cSJunchao Zhang CUSPARSE_INDEX_BASE_ZERO,cusparse_scalartype);CHKERRCUSPARSE(stat); 2062afb2bd1cSJunchao Zhang } 2063afb2bd1cSJunchao Zhang stat = cusparseSpMM_bufferSize(cusp->handle,opA,opB,mat->alpha_one, 2064afb2bd1cSJunchao Zhang mat->matDescr,mmdata->matBDescr,mat->beta_zero, 2065afb2bd1cSJunchao Zhang mmdata->matCDescr,cusparse_scalartype, 2066fcdce8c4SStefano Zampini cusp->spmmAlg,&mmBufferSize);CHKERRCUSPARSE(stat); 2067fcdce8c4SStefano Zampini if ((mmdata->mmBuffer && mmdata->mmBufferSize < mmBufferSize) || !mmdata->mmBuffer) { 2068fcdce8c4SStefano Zampini cerr = cudaFree(mmdata->mmBuffer);CHKERRCUDA(cerr); 2069fcdce8c4SStefano Zampini cerr = cudaMalloc(&mmdata->mmBuffer,mmBufferSize);CHKERRCUDA(cerr); 2070fcdce8c4SStefano Zampini mmdata->mmBufferSize = mmBufferSize; 2071fcdce8c4SStefano Zampini } 2072afb2bd1cSJunchao Zhang mmdata->initialized = PETSC_TRUE; 2073afb2bd1cSJunchao Zhang } else { 2074afb2bd1cSJunchao Zhang /* to be safe, always update pointers of the mats */ 2075afb2bd1cSJunchao Zhang stat = cusparseSpMatSetValues(mat->matDescr,csrmat->values->data().get());CHKERRCUSPARSE(stat); 2076afb2bd1cSJunchao Zhang stat = cusparseDnMatSetValues(mmdata->matBDescr,(void*)barray);CHKERRCUSPARSE(stat); 2077afb2bd1cSJunchao Zhang stat = cusparseDnMatSetValues(mmdata->matCDescr,(void*)carray);CHKERRCUSPARSE(stat); 2078afb2bd1cSJunchao Zhang } 2079afb2bd1cSJunchao Zhang 2080afb2bd1cSJunchao Zhang /* do cusparseSpMM, which supports transpose on B */ 2081afb2bd1cSJunchao Zhang stat = cusparseSpMM(cusp->handle,opA,opB,mat->alpha_one, 2082afb2bd1cSJunchao Zhang mat->matDescr,mmdata->matBDescr,mat->beta_zero, 2083afb2bd1cSJunchao Zhang mmdata->matCDescr,cusparse_scalartype, 2084fcdce8c4SStefano Zampini cusp->spmmAlg,mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2085afb2bd1cSJunchao Zhang #else 2086afb2bd1cSJunchao Zhang PetscInt k; 2087afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B */ 2088ccdfe979SStefano Zampini if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) { 2089ccdfe979SStefano Zampini cublasHandle_t cublasv2handle; 2090ccdfe979SStefano Zampini cublasStatus_t cerr; 2091ccdfe979SStefano Zampini 2092ccdfe979SStefano Zampini ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 2093ccdfe979SStefano Zampini cerr = cublasXgeam(cublasv2handle,CUBLAS_OP_T,CUBLAS_OP_T, 2094ccdfe979SStefano Zampini B->cmap->n,B->rmap->n, 2095ccdfe979SStefano Zampini &PETSC_CUSPARSE_ONE ,barray,blda, 2096ccdfe979SStefano Zampini &PETSC_CUSPARSE_ZERO,barray,blda, 2097ccdfe979SStefano Zampini mmdata->Bt,B->cmap->n);CHKERRCUBLAS(cerr); 2098ccdfe979SStefano Zampini blda = B->cmap->n; 2099afb2bd1cSJunchao Zhang k = B->cmap->n; 2100afb2bd1cSJunchao Zhang } else { 2101afb2bd1cSJunchao Zhang k = B->rmap->n; 2102ccdfe979SStefano Zampini } 2103ccdfe979SStefano Zampini 2104afb2bd1cSJunchao Zhang /* perform the MatMat operation, op(A) is m x k, op(B) is k x n */ 2105ccdfe979SStefano Zampini stat = cusparse_csr_spmm(cusp->handle,opA,m,n,k, 2106afb2bd1cSJunchao Zhang csrmat->num_entries,mat->alpha_one,mat->descr, 2107ccdfe979SStefano Zampini csrmat->values->data().get(), 2108ccdfe979SStefano Zampini csrmat->row_offsets->data().get(), 2109ccdfe979SStefano Zampini csrmat->column_indices->data().get(), 2110ccdfe979SStefano Zampini mmdata->Bt ? mmdata->Bt : barray,blda,mat->beta_zero, 2111ccdfe979SStefano Zampini carray,clda);CHKERRCUSPARSE(stat); 2112afb2bd1cSJunchao Zhang #endif 2113afb2bd1cSJunchao Zhang cerr = WaitForCUDA();CHKERRCUDA(cerr); 2114c8378d12SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2115c8378d12SStefano Zampini ierr = PetscLogGpuFlops(n*2.0*csrmat->num_entries);CHKERRQ(ierr); 2116ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayRead(B,&barray);CHKERRQ(ierr); 2117ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { 2118ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2119ccdfe979SStefano Zampini ierr = MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(B,mmdata->X,C,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 2120ccdfe979SStefano Zampini } else if (product->type == MATPRODUCT_PtAP) { 2121ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(mmdata->X,&carray);CHKERRQ(ierr); 2122ccdfe979SStefano Zampini ierr = MatMatMultNumeric_SeqDenseCUDA_SeqDenseCUDA_Private(B,mmdata->X,C,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 2123ccdfe979SStefano Zampini } else { 2124ccdfe979SStefano Zampini ierr = MatDenseCUDARestoreArrayWrite(C,&carray);CHKERRQ(ierr); 2125ccdfe979SStefano Zampini } 2126ccdfe979SStefano Zampini if (mmdata->cisdense) { 2127ccdfe979SStefano Zampini ierr = MatConvert(C,MATSEQDENSE,MAT_INPLACE_MATRIX,&C);CHKERRQ(ierr); 2128ccdfe979SStefano Zampini } 2129ccdfe979SStefano Zampini if (!biscuda) { 2130ccdfe979SStefano Zampini ierr = MatConvert(B,MATSEQDENSE,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr); 2131ccdfe979SStefano Zampini } 2132ccdfe979SStefano Zampini PetscFunctionReturn(0); 2133ccdfe979SStefano Zampini } 2134ccdfe979SStefano Zampini 2135ccdfe979SStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA(Mat C) 2136ccdfe979SStefano Zampini { 2137ccdfe979SStefano Zampini Mat_Product *product = C->product; 2138ccdfe979SStefano Zampini Mat A,B; 2139ccdfe979SStefano Zampini PetscInt m,n; 2140ccdfe979SStefano Zampini PetscBool cisdense,flg; 2141ccdfe979SStefano Zampini PetscErrorCode ierr; 2142ccdfe979SStefano Zampini MatMatCusparse *mmdata; 2143ccdfe979SStefano Zampini Mat_SeqAIJCUSPARSE *cusp; 2144ccdfe979SStefano Zampini 2145ccdfe979SStefano Zampini PetscFunctionBegin; 2146ccdfe979SStefano Zampini MatCheckProduct(C,1); 2147ccdfe979SStefano Zampini if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty"); 2148ccdfe979SStefano Zampini A = product->A; 2149ccdfe979SStefano Zampini B = product->B; 2150ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2151ccdfe979SStefano Zampini if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Not for type %s",((PetscObject)A)->type_name); 2152ccdfe979SStefano Zampini cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2153ccdfe979SStefano Zampini if (cusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Only for MAT_CUSPARSE_CSR format"); 2154ccdfe979SStefano Zampini switch (product->type) { 2155ccdfe979SStefano Zampini case MATPRODUCT_AB: 2156ccdfe979SStefano Zampini m = A->rmap->n; 2157ccdfe979SStefano Zampini n = B->cmap->n; 2158ccdfe979SStefano Zampini break; 2159ccdfe979SStefano Zampini case MATPRODUCT_AtB: 2160ccdfe979SStefano Zampini m = A->cmap->n; 2161ccdfe979SStefano Zampini n = B->cmap->n; 2162ccdfe979SStefano Zampini break; 2163ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2164ccdfe979SStefano Zampini m = A->rmap->n; 2165ccdfe979SStefano Zampini n = B->rmap->n; 2166ccdfe979SStefano Zampini break; 2167ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2168ccdfe979SStefano Zampini m = B->cmap->n; 2169ccdfe979SStefano Zampini n = B->cmap->n; 2170ccdfe979SStefano Zampini break; 2171ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2172ccdfe979SStefano Zampini m = B->rmap->n; 2173ccdfe979SStefano Zampini n = B->rmap->n; 2174ccdfe979SStefano Zampini break; 2175ccdfe979SStefano Zampini default: 2176ccdfe979SStefano Zampini SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Unsupported product type %s",MatProductTypes[product->type]); 2177ccdfe979SStefano Zampini } 2178ccdfe979SStefano Zampini ierr = MatSetSizes(C,m,n,m,n);CHKERRQ(ierr); 2179ccdfe979SStefano Zampini /* if C is of type MATSEQDENSE (CPU), perform the operation on the GPU and then copy on the CPU */ 2180ccdfe979SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)C,MATSEQDENSE,&cisdense);CHKERRQ(ierr); 2181ccdfe979SStefano Zampini ierr = MatSetType(C,MATSEQDENSECUDA);CHKERRQ(ierr); 2182ccdfe979SStefano Zampini 2183ccdfe979SStefano Zampini /* product data */ 2184ccdfe979SStefano Zampini ierr = PetscNew(&mmdata);CHKERRQ(ierr); 2185ccdfe979SStefano Zampini mmdata->cisdense = cisdense; 2186afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_LT(11,0,0) 2187afb2bd1cSJunchao Zhang /* cusparseXcsrmm does not support transpose on B, so we allocate buffer to store B^T */ 2188ccdfe979SStefano Zampini if (product->type == MATPRODUCT_ABt || product->type == MATPRODUCT_RARt) { 2189afb2bd1cSJunchao Zhang cudaError_t cerr = cudaMalloc((void**)&mmdata->Bt,(size_t)B->rmap->n*(size_t)B->cmap->n*sizeof(PetscScalar));CHKERRCUDA(cerr); 2190ccdfe979SStefano Zampini } 2191afb2bd1cSJunchao Zhang #endif 2192ccdfe979SStefano Zampini /* for these products we need intermediate storage */ 2193ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt || product->type == MATPRODUCT_PtAP) { 2194ccdfe979SStefano Zampini ierr = MatCreate(PetscObjectComm((PetscObject)C),&mmdata->X);CHKERRQ(ierr); 2195ccdfe979SStefano Zampini ierr = MatSetType(mmdata->X,MATSEQDENSECUDA);CHKERRQ(ierr); 2196ccdfe979SStefano Zampini if (product->type == MATPRODUCT_RARt) { /* do not preallocate, since the first call to MatDenseCUDAGetArray will preallocate on the GPU for us */ 2197ccdfe979SStefano Zampini ierr = MatSetSizes(mmdata->X,A->rmap->n,B->rmap->n,A->rmap->n,B->rmap->n);CHKERRQ(ierr); 2198ccdfe979SStefano Zampini } else { 2199ccdfe979SStefano Zampini ierr = MatSetSizes(mmdata->X,A->rmap->n,B->cmap->n,A->rmap->n,B->cmap->n);CHKERRQ(ierr); 2200ccdfe979SStefano Zampini } 2201ccdfe979SStefano Zampini } 2202ccdfe979SStefano Zampini C->product->data = mmdata; 2203ccdfe979SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 2204ccdfe979SStefano Zampini 2205ccdfe979SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqDENSECUDA; 2206ccdfe979SStefano Zampini PetscFunctionReturn(0); 2207ccdfe979SStefano Zampini } 2208ccdfe979SStefano Zampini 2209fcdce8c4SStefano Zampini static PetscErrorCode MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 2210ccdfe979SStefano Zampini { 2211ccdfe979SStefano Zampini Mat_Product *product = C->product; 2212fcdce8c4SStefano Zampini Mat A,B; 2213fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp,*Bcusp,*Ccusp; 2214fcdce8c4SStefano Zampini Mat_SeqAIJ *c = (Mat_SeqAIJ*)C->data; 2215fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat,*Bmat,*Cmat; 2216fcdce8c4SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 2217fcdce8c4SStefano Zampini PetscBool flg; 2218ccdfe979SStefano Zampini PetscErrorCode ierr; 2219fcdce8c4SStefano Zampini cusparseStatus_t stat; 2220fcdce8c4SStefano Zampini cudaError_t cerr; 2221fcdce8c4SStefano Zampini MatProductType ptype; 2222fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 2223fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2224fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 2225fcdce8c4SStefano Zampini #endif 2226ccdfe979SStefano Zampini 2227ccdfe979SStefano Zampini PetscFunctionBegin; 2228ccdfe979SStefano Zampini MatCheckProduct(C,1); 2229fcdce8c4SStefano Zampini if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty"); 2230fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)C,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2231fcdce8c4SStefano Zampini if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Not for C of type %s",((PetscObject)C)->type_name); 2232fcdce8c4SStefano Zampini mmdata = (MatMatCusparse*)C->product->data; 2233fcdce8c4SStefano Zampini A = product->A; 2234fcdce8c4SStefano Zampini B = product->B; 2235fcdce8c4SStefano Zampini if (mmdata->reusesym) { /* this happens when api_user is true, meaning that the matrix values have been already computed in the MatProductSymbolic phase */ 2236fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_FALSE; 2237fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 2238fcdce8c4SStefano Zampini if (Ccusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Only for MAT_CUSPARSE_CSR format"); 2239fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 2240fcdce8c4SStefano Zampini if (!Cmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing C mult struct for product type %s",MatProductTypes[C->product->type]); 2241fcdce8c4SStefano Zampini Ccsr = (CsrMatrix*)Cmat->mat; 2242fcdce8c4SStefano Zampini if (!Ccsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing C CSR struct"); 2243fcdce8c4SStefano Zampini goto finalize; 2244fcdce8c4SStefano Zampini } 2245fcdce8c4SStefano Zampini if (!c->nz) goto finalize; 2246fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2247fcdce8c4SStefano Zampini if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Not for type %s",((PetscObject)A)->type_name); 2248fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2249fcdce8c4SStefano Zampini if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Not for B of type %s",((PetscObject)B)->type_name); 2250fcdce8c4SStefano Zampini if (A->boundtocpu) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2251fcdce8c4SStefano Zampini if (B->boundtocpu) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_ARG_WRONG,"Cannot bind to CPU a CUSPARSE matrix between MatProductSymbolic and MatProductNumeric phases"); 2252fcdce8c4SStefano Zampini Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2253fcdce8c4SStefano Zampini Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr; 2254fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 2255fcdce8c4SStefano Zampini if (Acusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Only for MAT_CUSPARSE_CSR format"); 2256fcdce8c4SStefano Zampini if (Bcusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Only for MAT_CUSPARSE_CSR format"); 2257fcdce8c4SStefano Zampini if (Ccusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Only for MAT_CUSPARSE_CSR format"); 2258fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2259fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 2260fcdce8c4SStefano Zampini 2261fcdce8c4SStefano Zampini ptype = product->type; 2262fcdce8c4SStefano Zampini if (A->symmetric && ptype == MATPRODUCT_AtB) ptype = MATPRODUCT_AB; 2263fcdce8c4SStefano Zampini if (B->symmetric && ptype == MATPRODUCT_ABt) ptype = MATPRODUCT_AB; 2264fcdce8c4SStefano Zampini switch (ptype) { 2265fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2266fcdce8c4SStefano Zampini Amat = Acusp->mat; 2267fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2268fcdce8c4SStefano Zampini break; 2269fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2270fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 2271fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2272fcdce8c4SStefano Zampini break; 2273fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2274fcdce8c4SStefano Zampini Amat = Acusp->mat; 2275fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 2276fcdce8c4SStefano Zampini break; 2277fcdce8c4SStefano Zampini default: 2278fcdce8c4SStefano Zampini SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Unsupported product type %s",MatProductTypes[product->type]); 2279fcdce8c4SStefano Zampini } 2280fcdce8c4SStefano Zampini Cmat = Ccusp->mat; 2281fcdce8c4SStefano Zampini if (!Amat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing A mult struct for product type %s",MatProductTypes[ptype]); 2282fcdce8c4SStefano Zampini if (!Bmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing B mult struct for product type %s",MatProductTypes[ptype]); 2283fcdce8c4SStefano Zampini if (!Cmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing C mult struct for product type %s",MatProductTypes[ptype]); 2284fcdce8c4SStefano Zampini Acsr = (CsrMatrix*)Amat->mat; 2285fcdce8c4SStefano Zampini Bcsr = mmdata->Bcsr ? mmdata->Bcsr : (CsrMatrix*)Bmat->mat; /* B may be in compressed row storage */ 2286fcdce8c4SStefano Zampini Ccsr = (CsrMatrix*)Cmat->mat; 2287fcdce8c4SStefano Zampini if (!Acsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing A CSR struct"); 2288fcdce8c4SStefano Zampini if (!Bcsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing B CSR struct"); 2289fcdce8c4SStefano Zampini if (!Ccsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing C CSR struct"); 2290fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2291fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2292fcdce8c4SStefano Zampini BmatSpDescr = mmdata->Bcsr ? mmdata->matSpBDescr : Bmat->matDescr; /* B may be in compressed row storage */ 2293fcdce8c4SStefano Zampini stat = cusparseSpGEMM_compute(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2294fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2295fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2296fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2297fcdce8c4SStefano Zampini stat = cusparseSpGEMM_copy(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2298fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2299fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2300fcdce8c4SStefano Zampini #else 2301fcdce8c4SStefano Zampini stat = cusparse_csr_spgemm(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2302fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2303fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2304fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2305fcdce8c4SStefano Zampini Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get());CHKERRCUSPARSE(stat); 2306fcdce8c4SStefano Zampini #endif 2307fcdce8c4SStefano Zampini ierr = PetscLogGpuFlops(mmdata->flops);CHKERRQ(ierr); 2308fcdce8c4SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 2309fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2310fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 2311fcdce8c4SStefano Zampini finalize: 2312fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 2313fcdce8c4SStefano Zampini ierr = PetscInfo3(C,"Matrix size: %D X %D; storage space: 0 unneeded,%D used\n",C->rmap->n,C->cmap->n,c->nz);CHKERRQ(ierr); 2314fcdce8c4SStefano Zampini ierr = PetscInfo(C,"Number of mallocs during MatSetValues() is 0\n");CHKERRQ(ierr); 2315fcdce8c4SStefano Zampini ierr = PetscInfo1(C,"Maximum nonzeros in any row is %D\n",c->rmax);CHKERRQ(ierr); 2316fcdce8c4SStefano Zampini c->reallocs = 0; 2317fcdce8c4SStefano Zampini C->info.mallocs += 0; 2318fcdce8c4SStefano Zampini C->info.nz_unneeded = 0; 2319fcdce8c4SStefano Zampini C->assembled = C->was_assembled = PETSC_TRUE; 2320fcdce8c4SStefano Zampini C->num_ass++; 2321ccdfe979SStefano Zampini PetscFunctionReturn(0); 2322ccdfe979SStefano Zampini } 2323fcdce8c4SStefano Zampini 2324fcdce8c4SStefano Zampini static PetscErrorCode MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE(Mat C) 2325fcdce8c4SStefano Zampini { 2326fcdce8c4SStefano Zampini Mat_Product *product = C->product; 2327fcdce8c4SStefano Zampini Mat A,B; 2328fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp,*Bcusp,*Ccusp; 2329fcdce8c4SStefano Zampini Mat_SeqAIJ *a,*b,*c; 2330fcdce8c4SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Amat,*Bmat,*Cmat; 2331fcdce8c4SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 2332fcdce8c4SStefano Zampini PetscInt i,j,m,n,k; 2333fcdce8c4SStefano Zampini PetscBool flg; 2334fcdce8c4SStefano Zampini PetscErrorCode ierr; 2335fcdce8c4SStefano Zampini cusparseStatus_t stat; 2336fcdce8c4SStefano Zampini cudaError_t cerr; 2337fcdce8c4SStefano Zampini MatProductType ptype; 2338fcdce8c4SStefano Zampini MatMatCusparse *mmdata; 2339fcdce8c4SStefano Zampini PetscLogDouble flops; 2340fcdce8c4SStefano Zampini PetscBool biscompressed,ciscompressed; 2341fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2342fcdce8c4SStefano Zampini int64_t C_num_rows1, C_num_cols1, C_nnz1; 2343fcdce8c4SStefano Zampini size_t bufSize2; 2344fcdce8c4SStefano Zampini cusparseSpMatDescr_t BmatSpDescr; 2345fcdce8c4SStefano Zampini #else 2346fcdce8c4SStefano Zampini int cnz; 2347fcdce8c4SStefano Zampini #endif 2348fcdce8c4SStefano Zampini 2349fcdce8c4SStefano Zampini PetscFunctionBegin; 2350fcdce8c4SStefano Zampini MatCheckProduct(C,1); 2351fcdce8c4SStefano Zampini if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty"); 2352fcdce8c4SStefano Zampini A = product->A; 2353fcdce8c4SStefano Zampini B = product->B; 2354fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2355fcdce8c4SStefano Zampini if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Not for type %s",((PetscObject)A)->type_name); 2356fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)B,MATSEQAIJCUSPARSE,&flg);CHKERRQ(ierr); 2357fcdce8c4SStefano Zampini if (!flg) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Not for B of type %s",((PetscObject)B)->type_name); 2358fcdce8c4SStefano Zampini a = (Mat_SeqAIJ*)A->data; 2359fcdce8c4SStefano Zampini b = (Mat_SeqAIJ*)B->data; 2360fcdce8c4SStefano Zampini Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 2361fcdce8c4SStefano Zampini Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr; 2362fcdce8c4SStefano Zampini if (Acusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Only for MAT_CUSPARSE_CSR format"); 2363fcdce8c4SStefano Zampini if (Bcusp->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Only for MAT_CUSPARSE_CSR format"); 2364fcdce8c4SStefano Zampini 2365fcdce8c4SStefano Zampini /* product data */ 2366fcdce8c4SStefano Zampini ierr = PetscNew(&mmdata);CHKERRQ(ierr); 2367fcdce8c4SStefano Zampini C->product->data = mmdata; 2368fcdce8c4SStefano Zampini C->product->destroy = MatDestroy_MatMatCusparse; 2369fcdce8c4SStefano Zampini 2370fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2371fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 2372fcdce8c4SStefano Zampini ptype = product->type; 2373fcdce8c4SStefano Zampini if (A->symmetric && ptype == MATPRODUCT_AtB) ptype = MATPRODUCT_AB; 2374fcdce8c4SStefano Zampini if (B->symmetric && ptype == MATPRODUCT_ABt) ptype = MATPRODUCT_AB; 2375fcdce8c4SStefano Zampini biscompressed = PETSC_FALSE; 2376fcdce8c4SStefano Zampini ciscompressed = PETSC_FALSE; 2377fcdce8c4SStefano Zampini switch (ptype) { 2378fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2379fcdce8c4SStefano Zampini m = A->rmap->n; 2380fcdce8c4SStefano Zampini n = B->cmap->n; 2381fcdce8c4SStefano Zampini k = A->cmap->n; 2382fcdce8c4SStefano Zampini Amat = Acusp->mat; 2383fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2384fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 2385fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 2386fcdce8c4SStefano Zampini break; 2387fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2388fcdce8c4SStefano Zampini m = A->cmap->n; 2389fcdce8c4SStefano Zampini n = B->cmap->n; 2390fcdce8c4SStefano Zampini k = A->rmap->n; 2391fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSEGenerateTransposeForMult(A);CHKERRQ(ierr); 2392fcdce8c4SStefano Zampini Amat = Acusp->matTranspose; 2393fcdce8c4SStefano Zampini Bmat = Bcusp->mat; 2394fcdce8c4SStefano Zampini if (b->compressedrow.use) biscompressed = PETSC_TRUE; 2395fcdce8c4SStefano Zampini break; 2396fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2397fcdce8c4SStefano Zampini m = A->rmap->n; 2398fcdce8c4SStefano Zampini n = B->rmap->n; 2399fcdce8c4SStefano Zampini k = A->cmap->n; 2400fcdce8c4SStefano Zampini ierr = MatSeqAIJCUSPARSEGenerateTransposeForMult(B);CHKERRQ(ierr); 2401fcdce8c4SStefano Zampini Amat = Acusp->mat; 2402fcdce8c4SStefano Zampini Bmat = Bcusp->matTranspose; 2403fcdce8c4SStefano Zampini if (a->compressedrow.use) ciscompressed = PETSC_TRUE; 2404fcdce8c4SStefano Zampini break; 2405fcdce8c4SStefano Zampini default: 2406fcdce8c4SStefano Zampini SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Unsupported product type %s",MatProductTypes[product->type]); 2407fcdce8c4SStefano Zampini } 2408fcdce8c4SStefano Zampini 2409fcdce8c4SStefano Zampini /* create cusparse matrix */ 2410fcdce8c4SStefano Zampini ierr = MatSetSizes(C,m,n,m,n);CHKERRQ(ierr); 2411fcdce8c4SStefano Zampini ierr = MatSetType(C,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 2412fcdce8c4SStefano Zampini c = (Mat_SeqAIJ*)C->data; 2413fcdce8c4SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)C->spptr; 2414fcdce8c4SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 2415fcdce8c4SStefano Zampini Ccsr = new CsrMatrix; 2416fcdce8c4SStefano Zampini 2417fcdce8c4SStefano Zampini c->compressedrow.use = ciscompressed; 2418fcdce8c4SStefano Zampini if (c->compressedrow.use) { /* if a is in compressed row, than c will be in compressed row format */ 2419fcdce8c4SStefano Zampini c->compressedrow.nrows = a->compressedrow.nrows; 2420fcdce8c4SStefano Zampini ierr = PetscMalloc2(c->compressedrow.nrows+1,&c->compressedrow.i,c->compressedrow.nrows,&c->compressedrow.rindex);CHKERRQ(ierr); 2421fcdce8c4SStefano Zampini ierr = PetscArraycpy(c->compressedrow.rindex,a->compressedrow.rindex,c->compressedrow.nrows);CHKERRQ(ierr); 2422fcdce8c4SStefano Zampini Ccusp->workVector = new THRUSTARRAY(c->compressedrow.nrows); 2423fcdce8c4SStefano Zampini Cmat->cprowIndices = new THRUSTINTARRAY(c->compressedrow.nrows); 2424fcdce8c4SStefano Zampini Cmat->cprowIndices->assign(c->compressedrow.rindex,c->compressedrow.rindex + c->compressedrow.nrows); 2425fcdce8c4SStefano Zampini } else { 2426fcdce8c4SStefano Zampini c->compressedrow.nrows = 0; 2427fcdce8c4SStefano Zampini c->compressedrow.i = NULL; 2428fcdce8c4SStefano Zampini c->compressedrow.rindex = NULL; 2429fcdce8c4SStefano Zampini Ccusp->workVector = NULL; 2430fcdce8c4SStefano Zampini Cmat->cprowIndices = NULL; 2431fcdce8c4SStefano Zampini } 2432fcdce8c4SStefano Zampini Ccusp->nrows = ciscompressed ? c->compressedrow.nrows : m; 2433fcdce8c4SStefano Zampini Ccusp->mat = Cmat; 2434fcdce8c4SStefano Zampini Ccusp->mat->mat = Ccsr; 2435fcdce8c4SStefano Zampini Ccsr->num_rows = Ccusp->nrows; 2436fcdce8c4SStefano Zampini Ccsr->num_cols = n; 2437fcdce8c4SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(Ccusp->nrows+1); 2438fcdce8c4SStefano Zampini stat = cusparseCreateMatDescr(&Cmat->descr);CHKERRCUSPARSE(stat); 2439fcdce8c4SStefano Zampini stat = cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 2440fcdce8c4SStefano Zampini stat = cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 2441fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 2442fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 2443fcdce8c4SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 2444fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2445fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2446fcdce8c4SStefano Zampini cerr = cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 2447fcdce8c4SStefano Zampini if (!Ccsr->num_rows || !Ccsr->num_cols || !a->nz || !b->nz) { /* cusparse raise errors in different calls when matrices have zero rows/columns! */ 2448fcdce8c4SStefano Zampini thrust::fill(thrust::device,Ccsr->row_offsets->begin(),Ccsr->row_offsets->end(),0); 2449fcdce8c4SStefano Zampini c->nz = 0; 2450fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2451fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2452fcdce8c4SStefano Zampini goto finalizesym; 2453fcdce8c4SStefano Zampini } 2454fcdce8c4SStefano Zampini 2455fcdce8c4SStefano Zampini if (!Amat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing A mult struct for product type %s",MatProductTypes[ptype]); 2456fcdce8c4SStefano Zampini if (!Bmat) SETERRQ1(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing B mult struct for product type %s",MatProductTypes[ptype]); 2457fcdce8c4SStefano Zampini Acsr = (CsrMatrix*)Amat->mat; 2458fcdce8c4SStefano Zampini if (!biscompressed) { 2459fcdce8c4SStefano Zampini Bcsr = (CsrMatrix*)Bmat->mat; 2460fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2461fcdce8c4SStefano Zampini BmatSpDescr = Bmat->matDescr; 2462fcdce8c4SStefano Zampini #endif 2463fcdce8c4SStefano Zampini } else { /* we need to use row offsets for the full matrix */ 2464fcdce8c4SStefano Zampini CsrMatrix *cBcsr = (CsrMatrix*)Bmat->mat; 2465fcdce8c4SStefano Zampini Bcsr = new CsrMatrix; 2466fcdce8c4SStefano Zampini Bcsr->num_rows = B->rmap->n; 2467fcdce8c4SStefano Zampini Bcsr->num_cols = cBcsr->num_cols; 2468fcdce8c4SStefano Zampini Bcsr->num_entries = cBcsr->num_entries; 2469fcdce8c4SStefano Zampini Bcsr->column_indices = cBcsr->column_indices; 2470fcdce8c4SStefano Zampini Bcsr->values = cBcsr->values; 2471fcdce8c4SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 2472fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 2473fcdce8c4SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i,b->i + B->rmap->n + 1); 2474fcdce8c4SStefano Zampini ierr = PetscLogCpuToGpu((B->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 2475fcdce8c4SStefano Zampini } 2476fcdce8c4SStefano Zampini Bcsr->row_offsets = Bcusp->rowoffsets_gpu; 2477fcdce8c4SStefano Zampini mmdata->Bcsr = Bcsr; 2478fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2479fcdce8c4SStefano Zampini if (Bcsr->num_rows && Bcsr->num_cols) { 2480fcdce8c4SStefano Zampini stat = cusparseCreateCsr(&mmdata->matSpBDescr, Bcsr->num_rows, Bcsr->num_cols, Bcsr->num_entries, 2481fcdce8c4SStefano Zampini Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2482fcdce8c4SStefano Zampini Bcsr->values->data().get(), 2483fcdce8c4SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 2484fcdce8c4SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 2485fcdce8c4SStefano Zampini } 2486fcdce8c4SStefano Zampini BmatSpDescr = mmdata->matSpBDescr; 2487fcdce8c4SStefano Zampini #endif 2488fcdce8c4SStefano Zampini } 2489fcdce8c4SStefano Zampini if (!Acsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing A CSR struct"); 2490fcdce8c4SStefano Zampini if (!Bcsr) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing B CSR struct"); 2491fcdce8c4SStefano Zampini /* precompute flops count */ 2492fcdce8c4SStefano Zampini if (ptype == MATPRODUCT_AB) { 2493fcdce8c4SStefano Zampini for (i=0, flops = 0; i<A->rmap->n; i++) { 2494fcdce8c4SStefano Zampini const PetscInt st = a->i[i]; 2495fcdce8c4SStefano Zampini const PetscInt en = a->i[i+1]; 2496fcdce8c4SStefano Zampini for (j=st; j<en; j++) { 2497fcdce8c4SStefano Zampini const PetscInt brow = a->j[j]; 2498fcdce8c4SStefano Zampini flops += 2.*(b->i[brow+1] - b->i[brow]); 2499fcdce8c4SStefano Zampini } 2500fcdce8c4SStefano Zampini } 2501fcdce8c4SStefano Zampini } else if (ptype == MATPRODUCT_AtB) { 2502fcdce8c4SStefano Zampini for (i=0, flops = 0; i<A->rmap->n; i++) { 2503fcdce8c4SStefano Zampini const PetscInt anzi = a->i[i+1] - a->i[i]; 2504fcdce8c4SStefano Zampini const PetscInt bnzi = b->i[i+1] - b->i[i]; 2505fcdce8c4SStefano Zampini flops += (2.*anzi)*bnzi; 2506fcdce8c4SStefano Zampini } 2507fcdce8c4SStefano Zampini } else { /* TODO */ 2508fcdce8c4SStefano Zampini flops = 0.; 2509fcdce8c4SStefano Zampini } 2510fcdce8c4SStefano Zampini 2511fcdce8c4SStefano Zampini mmdata->flops = flops; 2512fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2513fcdce8c4SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2514fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 2515fcdce8c4SStefano Zampini stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, 0, 2516fcdce8c4SStefano Zampini NULL, NULL, NULL, 2517fcdce8c4SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 2518fcdce8c4SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 2519fcdce8c4SStefano Zampini stat = cusparseSpGEMM_createDescr(&mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2520fcdce8c4SStefano Zampini /* ask bufferSize bytes for external memory */ 2521fcdce8c4SStefano Zampini stat = cusparseSpGEMM_workEstimation(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2522fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2523fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2524fcdce8c4SStefano Zampini mmdata->spgemmDesc, &bufSize2, NULL);CHKERRCUSPARSE(stat); 2525bfcc3627SStefano Zampini cerr = cudaMalloc((void**) &mmdata->mmBuffer2, bufSize2);CHKERRCUDA(cerr); 2526fcdce8c4SStefano Zampini /* inspect the matrices A and B to understand the memory requirement for the next step */ 2527fcdce8c4SStefano Zampini stat = cusparseSpGEMM_workEstimation(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2528fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2529fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2530fcdce8c4SStefano Zampini mmdata->spgemmDesc, &bufSize2, mmdata->mmBuffer2);CHKERRCUSPARSE(stat); 2531fcdce8c4SStefano Zampini /* ask bufferSize again bytes for external memory */ 2532fcdce8c4SStefano Zampini stat = cusparseSpGEMM_compute(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2533fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2534fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2535fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, NULL);CHKERRCUSPARSE(stat); 2536fcdce8c4SStefano Zampini /* The CUSPARSE documentation is not clear, nor the API 2537fcdce8c4SStefano Zampini We need both buffers to perform the operations properly! 2538fcdce8c4SStefano Zampini mmdata->mmBuffer2 does not appear anywhere in the compute/copy API 2539fcdce8c4SStefano Zampini it only appears for the workEstimation stuff, but it seems it is needed in compute, so probably the address 2540fcdce8c4SStefano Zampini is stored in the descriptor! What a messy API... */ 2541bfcc3627SStefano Zampini cerr = cudaMalloc((void**) &mmdata->mmBuffer, mmdata->mmBufferSize);CHKERRCUDA(cerr); 2542fcdce8c4SStefano Zampini /* compute the intermediate product of A * B */ 2543fcdce8c4SStefano Zampini stat = cusparseSpGEMM_compute(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2544fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2545fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, 2546fcdce8c4SStefano Zampini mmdata->spgemmDesc, &mmdata->mmBufferSize, mmdata->mmBuffer);CHKERRCUSPARSE(stat); 2547fcdce8c4SStefano Zampini /* get matrix C non-zero entries C_nnz1 */ 2548fcdce8c4SStefano Zampini stat = cusparseSpMatGetSize(Cmat->matDescr, &C_num_rows1, &C_num_cols1, &C_nnz1);CHKERRCUSPARSE(stat); 2549fcdce8c4SStefano Zampini c->nz = (PetscInt) C_nnz1; 255000702c57SStefano Zampini ierr = PetscInfo9(C,"Buffer sizes for type %s, result %D x %D (k %D, nzA %D, nzB %D, nzC %D) are: %ldKB %ldKB\n",MatProductTypes[ptype],m,n,k,a->nz,b->nz,c->nz,bufSize2/1024,mmdata->mmBufferSize/1024);CHKERRQ(ierr); 2551fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2552fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2553fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2554fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2555fcdce8c4SStefano Zampini stat = cusparseCsrSetPointers(Cmat->matDescr, Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), 2556fcdce8c4SStefano Zampini Ccsr->values->data().get());CHKERRCUSPARSE(stat); 2557fcdce8c4SStefano Zampini stat = cusparseSpGEMM_copy(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2558fcdce8c4SStefano Zampini Cmat->alpha_one, Amat->matDescr, BmatSpDescr, Cmat->beta_zero, Cmat->matDescr, 2559fcdce8c4SStefano Zampini cusparse_scalartype, CUSPARSE_SPGEMM_DEFAULT, mmdata->spgemmDesc);CHKERRCUSPARSE(stat); 2560fcdce8c4SStefano Zampini #else 2561fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_HOST);CHKERRCUSPARSE(stat); 2562fcdce8c4SStefano Zampini stat = cusparseXcsrgemmNnz(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2563fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2564fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2565fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2566fcdce8c4SStefano Zampini Cmat->descr, Ccsr->row_offsets->data().get(), &cnz);CHKERRCUSPARSE(stat); 2567fcdce8c4SStefano Zampini c->nz = cnz; 2568fcdce8c4SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 2569fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2570fcdce8c4SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 2571fcdce8c4SStefano Zampini CHKERRCUDA(cudaPeekAtLastError()); /* catch out of memory errors */ 2572fcdce8c4SStefano Zampini 2573fcdce8c4SStefano Zampini stat = cusparseSetPointerMode(Ccusp->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 2574fcdce8c4SStefano Zampini /* with the old gemm interface (removed from 11.0 on) we cannot compute the symbolic factorization only. 2575fcdce8c4SStefano Zampini I have tried using the gemm2 interface (alpha * A * B + beta * D), which allows to do symbolic by passing NULL for values, but it seems quite buggy when 2576fcdce8c4SStefano Zampini D is NULL, despite the fact that CUSPARSE documentation claims it is supported! */ 2577fcdce8c4SStefano Zampini stat = cusparse_csr_spgemm(Ccusp->handle, CUSPARSE_OPERATION_NON_TRANSPOSE, CUSPARSE_OPERATION_NON_TRANSPOSE, 2578fcdce8c4SStefano Zampini Acsr->num_rows, Bcsr->num_cols, Acsr->num_cols, 2579fcdce8c4SStefano Zampini Amat->descr, Acsr->num_entries, Acsr->values->data().get(), Acsr->row_offsets->data().get(), Acsr->column_indices->data().get(), 2580fcdce8c4SStefano Zampini Bmat->descr, Bcsr->num_entries, Bcsr->values->data().get(), Bcsr->row_offsets->data().get(), Bcsr->column_indices->data().get(), 2581fcdce8c4SStefano Zampini Cmat->descr, Ccsr->values->data().get(), Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get());CHKERRCUSPARSE(stat); 2582fcdce8c4SStefano Zampini #endif 2583fcdce8c4SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 2584fcdce8c4SStefano Zampini ierr = PetscLogGpuFlops(mmdata->flops);CHKERRQ(ierr); 2585fcdce8c4SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2586fcdce8c4SStefano Zampini finalizesym: 2587fcdce8c4SStefano Zampini c->singlemalloc = PETSC_FALSE; 2588fcdce8c4SStefano Zampini c->free_a = PETSC_TRUE; 2589fcdce8c4SStefano Zampini c->free_ij = PETSC_TRUE; 2590fcdce8c4SStefano Zampini ierr = PetscMalloc1(m+1,&c->i);CHKERRQ(ierr); 2591fcdce8c4SStefano Zampini ierr = PetscMalloc1(c->nz,&c->j);CHKERRQ(ierr); 2592fcdce8c4SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 2593fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 2594fcdce8c4SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 2595fcdce8c4SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 2596fcdce8c4SStefano Zampini ii = *Ccsr->row_offsets; 2597fcdce8c4SStefano Zampini jj = *Ccsr->column_indices; 2598fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 2599fcdce8c4SStefano Zampini cerr = cudaMemcpy(d_i,ii.data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2600fcdce8c4SStefano Zampini cerr = cudaMemcpy(c->j,jj.data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2601fcdce8c4SStefano Zampini } else { 2602fcdce8c4SStefano Zampini PetscInt *d_i = c->i; 2603fcdce8c4SStefano Zampini if (ciscompressed) d_i = c->compressedrow.i; 2604fcdce8c4SStefano Zampini cerr = cudaMemcpy(d_i,Ccsr->row_offsets->data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2605fcdce8c4SStefano Zampini cerr = cudaMemcpy(c->j,Ccsr->column_indices->data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 2606fcdce8c4SStefano Zampini } 2607fcdce8c4SStefano Zampini if (ciscompressed) { /* need to expand host row offsets */ 2608fcdce8c4SStefano Zampini PetscInt r = 0; 2609fcdce8c4SStefano Zampini c->i[0] = 0; 2610fcdce8c4SStefano Zampini for (k = 0; k < c->compressedrow.nrows; k++) { 2611fcdce8c4SStefano Zampini const PetscInt next = c->compressedrow.rindex[k]; 2612fcdce8c4SStefano Zampini const PetscInt old = c->compressedrow.i[k]; 2613fcdce8c4SStefano Zampini for (; r < next; r++) c->i[r+1] = old; 2614fcdce8c4SStefano Zampini } 2615fcdce8c4SStefano Zampini for (; r < m; r++) c->i[r+1] = c->compressedrow.i[c->compressedrow.nrows]; 2616fcdce8c4SStefano Zampini } 2617fcdce8c4SStefano Zampini ierr = PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size())*sizeof(PetscInt));CHKERRQ(ierr); 2618fcdce8c4SStefano Zampini ierr = PetscMalloc1(m,&c->ilen);CHKERRQ(ierr); 2619fcdce8c4SStefano Zampini ierr = PetscMalloc1(m,&c->imax);CHKERRQ(ierr); 2620fcdce8c4SStefano Zampini c->maxnz = c->nz; 2621fcdce8c4SStefano Zampini c->nonzerorowcnt = 0; 2622fcdce8c4SStefano Zampini c->rmax = 0; 2623fcdce8c4SStefano Zampini for (k = 0; k < m; k++) { 2624fcdce8c4SStefano Zampini const PetscInt nn = c->i[k+1] - c->i[k]; 2625fcdce8c4SStefano Zampini c->ilen[k] = c->imax[k] = nn; 2626fcdce8c4SStefano Zampini c->nonzerorowcnt += (PetscInt)!!nn; 2627fcdce8c4SStefano Zampini c->rmax = PetscMax(c->rmax,nn); 2628fcdce8c4SStefano Zampini } 2629fcdce8c4SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(C);CHKERRQ(ierr); 2630fcdce8c4SStefano Zampini ierr = PetscMalloc1(c->nz,&c->a);CHKERRQ(ierr); 2631fcdce8c4SStefano Zampini Ccsr->num_entries = c->nz; 2632fcdce8c4SStefano Zampini 2633fcdce8c4SStefano Zampini C->nonzerostate++; 2634fcdce8c4SStefano Zampini ierr = PetscLayoutSetUp(C->rmap);CHKERRQ(ierr); 2635fcdce8c4SStefano Zampini ierr = PetscLayoutSetUp(C->cmap);CHKERRQ(ierr); 2636fcdce8c4SStefano Zampini Ccusp->nonzerostate = C->nonzerostate; 2637fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 2638fcdce8c4SStefano Zampini C->preallocated = PETSC_TRUE; 2639fcdce8c4SStefano Zampini C->assembled = PETSC_FALSE; 2640fcdce8c4SStefano Zampini C->was_assembled = PETSC_FALSE; 2641abb89eb1SStefano Zampini if (product->api_user && A->offloadmask == PETSC_OFFLOAD_BOTH && B->offloadmask == PETSC_OFFLOAD_BOTH) { /* flag the matrix C values as computed, so that the numeric phase will only call MatAssembly */ 2642fcdce8c4SStefano Zampini mmdata->reusesym = PETSC_TRUE; 2643fcdce8c4SStefano Zampini C->offloadmask = PETSC_OFFLOAD_GPU; 2644fcdce8c4SStefano Zampini } 2645fcdce8c4SStefano Zampini C->ops->productnumeric = MatProductNumeric_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 2646fcdce8c4SStefano Zampini PetscFunctionReturn(0); 2647fcdce8c4SStefano Zampini } 2648fcdce8c4SStefano Zampini 2649fcdce8c4SStefano Zampini PETSC_INTERN PetscErrorCode MatProductSetFromOptions_SeqAIJ_SeqDense(Mat); 2650fcdce8c4SStefano Zampini 2651fcdce8c4SStefano Zampini /* handles sparse or dense B */ 2652fcdce8c4SStefano Zampini static PetscErrorCode MatProductSetFromOptions_SeqAIJCUSPARSE(Mat mat) 2653fcdce8c4SStefano Zampini { 2654fcdce8c4SStefano Zampini Mat_Product *product = mat->product; 2655fcdce8c4SStefano Zampini PetscErrorCode ierr; 2656fcdce8c4SStefano Zampini PetscBool isdense = PETSC_FALSE,Biscusp = PETSC_FALSE,Ciscusp = PETSC_TRUE; 2657fcdce8c4SStefano Zampini 2658fcdce8c4SStefano Zampini PetscFunctionBegin; 2659fcdce8c4SStefano Zampini MatCheckProduct(mat,1); 2660fcdce8c4SStefano Zampini ierr = PetscObjectBaseTypeCompare((PetscObject)product->B,MATSEQDENSE,&isdense);CHKERRQ(ierr); 2661abb89eb1SStefano Zampini if (!product->A->boundtocpu && !product->B->boundtocpu) { 2662fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)product->B,MATSEQAIJCUSPARSE,&Biscusp);CHKERRQ(ierr); 2663fcdce8c4SStefano Zampini } 2664fcdce8c4SStefano Zampini if (product->type == MATPRODUCT_ABC) { 2665fcdce8c4SStefano Zampini Ciscusp = PETSC_FALSE; 2666fcdce8c4SStefano Zampini if (!product->C->boundtocpu) { 2667fcdce8c4SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)product->C,MATSEQAIJCUSPARSE,&Ciscusp);CHKERRQ(ierr); 2668fcdce8c4SStefano Zampini } 2669fcdce8c4SStefano Zampini } 2670fcdce8c4SStefano Zampini if (isdense) { 2671ccdfe979SStefano Zampini switch (product->type) { 2672ccdfe979SStefano Zampini case MATPRODUCT_AB: 2673ccdfe979SStefano Zampini case MATPRODUCT_AtB: 2674ccdfe979SStefano Zampini case MATPRODUCT_ABt: 2675ccdfe979SStefano Zampini case MATPRODUCT_PtAP: 2676ccdfe979SStefano Zampini case MATPRODUCT_RARt: 2677fcdce8c4SStefano Zampini if (product->A->boundtocpu) { 2678fcdce8c4SStefano Zampini ierr = MatProductSetFromOptions_SeqAIJ_SeqDense(mat);CHKERRQ(ierr); 2679fcdce8c4SStefano Zampini } else { 2680fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqDENSECUDA; 2681fcdce8c4SStefano Zampini } 2682fcdce8c4SStefano Zampini break; 2683fcdce8c4SStefano Zampini case MATPRODUCT_ABC: 2684fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 2685fcdce8c4SStefano Zampini break; 2686ccdfe979SStefano Zampini default: 2687ccdfe979SStefano Zampini break; 2688ccdfe979SStefano Zampini } 2689fcdce8c4SStefano Zampini } else if (Biscusp && Ciscusp) { 2690fcdce8c4SStefano Zampini switch (product->type) { 2691fcdce8c4SStefano Zampini case MATPRODUCT_AB: 2692fcdce8c4SStefano Zampini case MATPRODUCT_AtB: 2693fcdce8c4SStefano Zampini case MATPRODUCT_ABt: 2694fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_SeqAIJCUSPARSE_SeqAIJCUSPARSE; 2695fcdce8c4SStefano Zampini break; 2696fcdce8c4SStefano Zampini case MATPRODUCT_PtAP: 2697fcdce8c4SStefano Zampini case MATPRODUCT_RARt: 2698fcdce8c4SStefano Zampini case MATPRODUCT_ABC: 2699fcdce8c4SStefano Zampini mat->ops->productsymbolic = MatProductSymbolic_ABC_Basic; 2700fcdce8c4SStefano Zampini break; 2701fcdce8c4SStefano Zampini default: 2702fcdce8c4SStefano Zampini break; 2703fcdce8c4SStefano Zampini } 2704fcdce8c4SStefano Zampini } else { /* fallback for AIJ */ 2705fcdce8c4SStefano Zampini ierr = MatProductSetFromOptions_SeqAIJ(mat);CHKERRQ(ierr); 2706fcdce8c4SStefano Zampini } 2707ccdfe979SStefano Zampini PetscFunctionReturn(0); 2708ccdfe979SStefano Zampini } 2709ccdfe979SStefano Zampini 27106fa9248bSJed Brown static PetscErrorCode MatMult_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 27119ae82921SPaul Mullowney { 2712b175d8bbSPaul Mullowney PetscErrorCode ierr; 27139ae82921SPaul Mullowney 27149ae82921SPaul Mullowney PetscFunctionBegin; 2715e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 2716e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2717e6e9a74fSStefano Zampini } 2718e6e9a74fSStefano Zampini 2719e6e9a74fSStefano Zampini static PetscErrorCode MatMultAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy, Vec zz) 2720e6e9a74fSStefano Zampini { 2721e6e9a74fSStefano Zampini PetscErrorCode ierr; 2722e6e9a74fSStefano Zampini 2723e6e9a74fSStefano Zampini PetscFunctionBegin; 2724e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_FALSE,PETSC_FALSE);CHKERRQ(ierr); 2725e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2726e6e9a74fSStefano Zampini } 2727e6e9a74fSStefano Zampini 2728e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTranspose_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 2729e6e9a74fSStefano Zampini { 2730e6e9a74fSStefano Zampini PetscErrorCode ierr; 2731e6e9a74fSStefano Zampini 2732e6e9a74fSStefano Zampini PetscFunctionBegin; 2733e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_TRUE,PETSC_TRUE);CHKERRQ(ierr); 2734e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2735e6e9a74fSStefano Zampini } 2736e6e9a74fSStefano Zampini 2737e6e9a74fSStefano Zampini static PetscErrorCode MatMultHermitianTransposeAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz) 2738e6e9a74fSStefano Zampini { 2739e6e9a74fSStefano Zampini PetscErrorCode ierr; 2740e6e9a74fSStefano Zampini 2741e6e9a74fSStefano Zampini PetscFunctionBegin; 2742e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_TRUE,PETSC_TRUE);CHKERRQ(ierr); 27439ae82921SPaul Mullowney PetscFunctionReturn(0); 27449ae82921SPaul Mullowney } 27459ae82921SPaul Mullowney 27466fa9248bSJed Brown static PetscErrorCode MatMultTranspose_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy) 2747ca45077fSPaul Mullowney { 2748b175d8bbSPaul Mullowney PetscErrorCode ierr; 2749ca45077fSPaul Mullowney 2750ca45077fSPaul Mullowney PetscFunctionBegin; 2751e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,NULL,yy,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 2752ca45077fSPaul Mullowney PetscFunctionReturn(0); 2753ca45077fSPaul Mullowney } 2754ca45077fSPaul Mullowney 2755afb2bd1cSJunchao Zhang /* z = op(A) x + y. If trans & !herm, op = ^T; if trans & herm, op = ^H; if !trans, op = no-op */ 2756e6e9a74fSStefano Zampini static PetscErrorCode MatMultAddKernel_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz,PetscBool trans,PetscBool herm) 27579ae82921SPaul Mullowney { 27589ae82921SPaul Mullowney Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 2759aa372e3fSPaul Mullowney Mat_SeqAIJCUSPARSE *cusparsestruct = (Mat_SeqAIJCUSPARSE*)A->spptr; 27609ff858a8SKarl Rupp Mat_SeqAIJCUSPARSEMultStruct *matstruct; 2761e6e9a74fSStefano Zampini PetscScalar *xarray,*zarray,*dptr,*beta,*xptr; 2762b175d8bbSPaul Mullowney PetscErrorCode ierr; 276357d48284SJunchao Zhang cudaError_t cerr; 2764aa372e3fSPaul Mullowney cusparseStatus_t stat; 2765e6e9a74fSStefano Zampini cusparseOperation_t opA = CUSPARSE_OPERATION_NON_TRANSPOSE; 2766e6e9a74fSStefano Zampini PetscBool compressed; 2767afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2768afb2bd1cSJunchao Zhang PetscInt nx,ny; 2769afb2bd1cSJunchao Zhang #endif 27706e111a19SKarl Rupp 27719ae82921SPaul Mullowney PetscFunctionBegin; 2772e6e9a74fSStefano Zampini if (herm && !trans) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Hermitian and not transpose not supported"); 2773e6e9a74fSStefano Zampini if (!a->nonzerorowcnt) { 2774afb2bd1cSJunchao Zhang if (!yy) {ierr = VecSet_SeqCUDA(zz,0);CHKERRQ(ierr);} 2775d38a13f6SStefano Zampini else {ierr = VecCopy_SeqCUDA(yy,zz);CHKERRQ(ierr);} 2776e6e9a74fSStefano Zampini PetscFunctionReturn(0); 2777e6e9a74fSStefano Zampini } 277834d6c7a5SJose E. Roman /* The line below is necessary due to the operations that modify the matrix on the CPU (axpy, scale, etc) */ 277934d6c7a5SJose E. Roman ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 2780e6e9a74fSStefano Zampini if (!trans) { 27819ff858a8SKarl Rupp matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 2782c9567895SMark if (!matstruct) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"SeqAIJCUSPARSE does not have a 'mat' (need to fix)"); 2783e6e9a74fSStefano Zampini } else { 2784e6e9a74fSStefano Zampini if (herm || !cusparsestruct->transgen) { 2785e6e9a74fSStefano Zampini opA = herm ? CUSPARSE_OPERATION_CONJUGATE_TRANSPOSE : CUSPARSE_OPERATION_TRANSPOSE; 2786e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->mat; 2787e6e9a74fSStefano Zampini } else { 2788afb2bd1cSJunchao Zhang if (!cusparsestruct->matTranspose) {ierr = MatSeqAIJCUSPARSEGenerateTransposeForMult(A);CHKERRQ(ierr);} 2789e6e9a74fSStefano Zampini matstruct = (Mat_SeqAIJCUSPARSEMultStruct*)cusparsestruct->matTranspose; 2790e6e9a74fSStefano Zampini } 2791e6e9a74fSStefano Zampini } 2792e6e9a74fSStefano Zampini /* Does the matrix use compressed rows (i.e., drop zero rows)? */ 2793e6e9a74fSStefano Zampini compressed = matstruct->cprowIndices ? PETSC_TRUE : PETSC_FALSE; 2794213423ffSJunchao Zhang 2795e6e9a74fSStefano Zampini try { 2796e6e9a74fSStefano Zampini ierr = VecCUDAGetArrayRead(xx,(const PetscScalar**)&xarray);CHKERRQ(ierr); 2797213423ffSJunchao Zhang if (yy == zz) {ierr = VecCUDAGetArray(zz,&zarray);CHKERRQ(ierr);} /* read & write zz, so need to get uptodate zarray on GPU */ 2798213423ffSJunchao Zhang else {ierr = VecCUDAGetArrayWrite(zz,&zarray);CHKERRQ(ierr);} /* write zz, so no need to init zarray on GPU */ 2799afb2bd1cSJunchao Zhang 280085ba7357SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2801e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 2802afb2bd1cSJunchao Zhang /* z = A x + beta y. 2803afb2bd1cSJunchao Zhang If A is compressed (with less rows), then Ax is shorter than the full z, so we need a work vector to store Ax. 2804afb2bd1cSJunchao Zhang When A is non-compressed, and z = y, we can set beta=1 to compute y = Ax + y in one call. 2805afb2bd1cSJunchao Zhang */ 2806e6e9a74fSStefano Zampini xptr = xarray; 2807afb2bd1cSJunchao Zhang dptr = compressed ? cusparsestruct->workVector->data().get() : zarray; 2808213423ffSJunchao Zhang beta = (yy == zz && !compressed) ? matstruct->beta_one : matstruct->beta_zero; 2809afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2810afb2bd1cSJunchao Zhang /* Get length of x, y for y=Ax. ny might be shorter than the work vector's allocated length, since the work vector is 2811afb2bd1cSJunchao Zhang allocated to accommodate different uses. So we get the length info directly from mat. 2812afb2bd1cSJunchao Zhang */ 2813afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 2814afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 2815afb2bd1cSJunchao Zhang nx = mat->num_cols; 2816afb2bd1cSJunchao Zhang ny = mat->num_rows; 2817afb2bd1cSJunchao Zhang } 2818afb2bd1cSJunchao Zhang #endif 2819e6e9a74fSStefano Zampini } else { 2820afb2bd1cSJunchao Zhang /* z = A^T x + beta y 2821afb2bd1cSJunchao Zhang If A is compressed, then we need a work vector as the shorter version of x to compute A^T x. 2822afb2bd1cSJunchao Zhang Note A^Tx is of full length, so we set beta to 1.0 if y exists. 2823afb2bd1cSJunchao Zhang */ 2824afb2bd1cSJunchao Zhang xptr = compressed ? cusparsestruct->workVector->data().get() : xarray; 2825e6e9a74fSStefano Zampini dptr = zarray; 2826e6e9a74fSStefano Zampini beta = yy ? matstruct->beta_one : matstruct->beta_zero; 2827afb2bd1cSJunchao Zhang if (compressed) { /* Scatter x to work vector */ 2828e6e9a74fSStefano Zampini thrust::device_ptr<PetscScalar> xarr = thrust::device_pointer_cast(xarray); 2829e6e9a74fSStefano Zampini thrust::for_each(thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))), 2830e6e9a74fSStefano Zampini thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(xarr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), 2831e6e9a74fSStefano Zampini VecCUDAEqualsReverse()); 2832e6e9a74fSStefano Zampini } 2833afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2834afb2bd1cSJunchao Zhang if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 2835afb2bd1cSJunchao Zhang CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 2836afb2bd1cSJunchao Zhang nx = mat->num_rows; 2837afb2bd1cSJunchao Zhang ny = mat->num_cols; 2838afb2bd1cSJunchao Zhang } 2839afb2bd1cSJunchao Zhang #endif 2840e6e9a74fSStefano Zampini } 28419ae82921SPaul Mullowney 2842afb2bd1cSJunchao Zhang /* csr_spmv does y = alpha op(A) x + beta y */ 2843aa372e3fSPaul Mullowney if (cusparsestruct->format == MAT_CUSPARSE_CSR) { 2844afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2845afb2bd1cSJunchao Zhang if (opA < 0 || opA > 2) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"cuSPARSE ABI on cusparseOperation_t has changed and PETSc has not been updated accordingly"); 2846afb2bd1cSJunchao Zhang if (!matstruct->cuSpMV[opA].initialized) { /* built on demand */ 2847afb2bd1cSJunchao Zhang stat = cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecXDescr,nx,xptr,cusparse_scalartype);CHKERRCUSPARSE(stat); 2848afb2bd1cSJunchao Zhang stat = cusparseCreateDnVec(&matstruct->cuSpMV[opA].vecYDescr,ny,dptr,cusparse_scalartype);CHKERRCUSPARSE(stat); 2849afb2bd1cSJunchao Zhang stat = cusparseSpMV_bufferSize(cusparsestruct->handle, opA, matstruct->alpha_one, 2850afb2bd1cSJunchao Zhang matstruct->matDescr, 2851afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecXDescr, beta, 2852afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecYDescr, 2853afb2bd1cSJunchao Zhang cusparse_scalartype, 2854afb2bd1cSJunchao Zhang cusparsestruct->spmvAlg, 2855afb2bd1cSJunchao Zhang &matstruct->cuSpMV[opA].spmvBufferSize);CHKERRCUSPARSE(stat); 2856afb2bd1cSJunchao Zhang cerr = cudaMalloc(&matstruct->cuSpMV[opA].spmvBuffer,matstruct->cuSpMV[opA].spmvBufferSize);CHKERRCUDA(cerr); 2857afb2bd1cSJunchao Zhang 2858afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].initialized = PETSC_TRUE; 2859afb2bd1cSJunchao Zhang } else { 2860afb2bd1cSJunchao Zhang /* x, y's value pointers might change between calls, but their shape is kept, so we just update pointers */ 2861afb2bd1cSJunchao Zhang stat = cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecXDescr,xptr);CHKERRCUSPARSE(stat); 2862afb2bd1cSJunchao Zhang stat = cusparseDnVecSetValues(matstruct->cuSpMV[opA].vecYDescr,dptr);CHKERRCUSPARSE(stat); 2863afb2bd1cSJunchao Zhang } 2864afb2bd1cSJunchao Zhang 2865afb2bd1cSJunchao Zhang stat = cusparseSpMV(cusparsestruct->handle, opA, 2866afb2bd1cSJunchao Zhang matstruct->alpha_one, 2867afb2bd1cSJunchao Zhang matstruct->matDescr, /* built in MatSeqAIJCUSPARSECopyToGPU() or MatSeqAIJCUSPARSEGenerateTransposeForMult() */ 2868afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecXDescr, 2869afb2bd1cSJunchao Zhang beta, 2870afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].vecYDescr, 2871afb2bd1cSJunchao Zhang cusparse_scalartype, 2872afb2bd1cSJunchao Zhang cusparsestruct->spmvAlg, 2873afb2bd1cSJunchao Zhang matstruct->cuSpMV[opA].spmvBuffer);CHKERRCUSPARSE(stat); 2874afb2bd1cSJunchao Zhang #else 28757656d835SStefano Zampini CsrMatrix *mat = (CsrMatrix*)matstruct->mat; 2876e6e9a74fSStefano Zampini stat = cusparse_csr_spmv(cusparsestruct->handle, opA, 2877a65300a6SPaul Mullowney mat->num_rows, mat->num_cols, 2878afb2bd1cSJunchao Zhang mat->num_entries, matstruct->alpha_one, matstruct->descr, 2879aa372e3fSPaul Mullowney mat->values->data().get(), mat->row_offsets->data().get(), 2880e6e9a74fSStefano Zampini mat->column_indices->data().get(), xptr, beta, 288157d48284SJunchao Zhang dptr);CHKERRCUSPARSE(stat); 2882afb2bd1cSJunchao Zhang #endif 2883aa372e3fSPaul Mullowney } else { 2884213423ffSJunchao Zhang if (cusparsestruct->nrows) { 2885afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 2886afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 2887afb2bd1cSJunchao Zhang #else 2888301298b4SMark Adams cusparseHybMat_t hybMat = (cusparseHybMat_t)matstruct->mat; 2889e6e9a74fSStefano Zampini stat = cusparse_hyb_spmv(cusparsestruct->handle, opA, 2890afb2bd1cSJunchao Zhang matstruct->alpha_one, matstruct->descr, hybMat, 2891e6e9a74fSStefano Zampini xptr, beta, 289257d48284SJunchao Zhang dptr);CHKERRCUSPARSE(stat); 2893afb2bd1cSJunchao Zhang #endif 2894a65300a6SPaul Mullowney } 2895aa372e3fSPaul Mullowney } 289605035670SJunchao Zhang cerr = WaitForCUDA();CHKERRCUDA(cerr); 2897958c4211Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2898aa372e3fSPaul Mullowney 2899e6e9a74fSStefano Zampini if (opA == CUSPARSE_OPERATION_NON_TRANSPOSE) { 2900213423ffSJunchao Zhang if (yy) { /* MatMultAdd: zz = A*xx + yy */ 2901213423ffSJunchao Zhang if (compressed) { /* A is compressed. We first copy yy to zz, then ScatterAdd the work vector to zz */ 2902213423ffSJunchao Zhang ierr = VecCopy_SeqCUDA(yy,zz);CHKERRQ(ierr); /* zz = yy */ 2903e6e9a74fSStefano Zampini } else if (zz != yy) { /* A is not compressed. zz already contains A*xx, and we just need to add yy */ 2904213423ffSJunchao Zhang ierr = VecAXPY_SeqCUDA(zz,1.0,yy);CHKERRQ(ierr); /* zz += yy */ 29057656d835SStefano Zampini } 2906213423ffSJunchao Zhang } else if (compressed) { /* MatMult: zz = A*xx. A is compressed, so we zero zz first, then ScatterAdd the work vector to zz */ 2907c1fb3f03SStefano Zampini ierr = VecSet_SeqCUDA(zz,0);CHKERRQ(ierr); 29087656d835SStefano Zampini } 29097656d835SStefano Zampini 2910213423ffSJunchao Zhang /* ScatterAdd the result from work vector into the full vector when A is compressed */ 2911213423ffSJunchao Zhang if (compressed) { 2912213423ffSJunchao Zhang thrust::device_ptr<PetscScalar> zptr = thrust::device_pointer_cast(zarray); 2913e6e9a74fSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 2914c41cb2e2SAlejandro Lamas Daviña thrust::for_each(thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))), 2915e6e9a74fSStefano Zampini thrust::make_zip_iterator(thrust::make_tuple(cusparsestruct->workVector->begin(), thrust::make_permutation_iterator(zptr, matstruct->cprowIndices->begin()))) + matstruct->cprowIndices->size(), 2916c41cb2e2SAlejandro Lamas Daviña VecCUDAPlusEquals()); 291705035670SJunchao Zhang cerr = WaitForCUDA();CHKERRCUDA(cerr); 2918958c4211Shannah_mairs ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 2919e6e9a74fSStefano Zampini } 2920e6e9a74fSStefano Zampini } else { 2921e6e9a74fSStefano Zampini if (yy && yy != zz) { 2922e6e9a74fSStefano Zampini ierr = VecAXPY_SeqCUDA(zz,1.0,yy);CHKERRQ(ierr); /* zz += yy */ 2923e6e9a74fSStefano Zampini } 2924e6e9a74fSStefano Zampini } 2925e6e9a74fSStefano Zampini ierr = VecCUDARestoreArrayRead(xx,(const PetscScalar**)&xarray);CHKERRQ(ierr); 2926213423ffSJunchao Zhang if (yy == zz) {ierr = VecCUDARestoreArray(zz,&zarray);CHKERRQ(ierr);} 2927213423ffSJunchao Zhang else {ierr = VecCUDARestoreArrayWrite(zz,&zarray);CHKERRQ(ierr);} 29289ae82921SPaul Mullowney } catch(char *ex) { 29299ae82921SPaul Mullowney SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_LIB,"CUSPARSE error: %s", ex); 29309ae82921SPaul Mullowney } 2931e6e9a74fSStefano Zampini if (yy) { 2932958c4211Shannah_mairs ierr = PetscLogGpuFlops(2.0*a->nz);CHKERRQ(ierr); 2933e6e9a74fSStefano Zampini } else { 2934e6e9a74fSStefano Zampini ierr = PetscLogGpuFlops(2.0*a->nz-a->nonzerorowcnt);CHKERRQ(ierr); 2935e6e9a74fSStefano Zampini } 29369ae82921SPaul Mullowney PetscFunctionReturn(0); 29379ae82921SPaul Mullowney } 29389ae82921SPaul Mullowney 29396fa9248bSJed Brown static PetscErrorCode MatMultTransposeAdd_SeqAIJCUSPARSE(Mat A,Vec xx,Vec yy,Vec zz) 2940ca45077fSPaul Mullowney { 2941b175d8bbSPaul Mullowney PetscErrorCode ierr; 29426e111a19SKarl Rupp 2943ca45077fSPaul Mullowney PetscFunctionBegin; 2944e6e9a74fSStefano Zampini ierr = MatMultAddKernel_SeqAIJCUSPARSE(A,xx,yy,zz,PETSC_TRUE,PETSC_FALSE);CHKERRQ(ierr); 2945ca45077fSPaul Mullowney PetscFunctionReturn(0); 2946ca45077fSPaul Mullowney } 2947ca45077fSPaul Mullowney 29486fa9248bSJed Brown static PetscErrorCode MatAssemblyEnd_SeqAIJCUSPARSE(Mat A,MatAssemblyType mode) 29499ae82921SPaul Mullowney { 29509ae82921SPaul Mullowney PetscErrorCode ierr; 2951a587d139SMark PetscSplitCSRDataStructure *d_mat = NULL; 29529ae82921SPaul Mullowney PetscFunctionBegin; 2953bc3f50f2SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 29543fa6b06aSMark Adams d_mat = ((Mat_SeqAIJCUSPARSE*)A->spptr)->deviceMat; 2955bc3f50f2SPaul Mullowney } 29563fa6b06aSMark Adams ierr = MatAssemblyEnd_SeqAIJ(A,mode);CHKERRQ(ierr); // this does very little if assembled on GPU - call it? 29573fa6b06aSMark Adams if (mode == MAT_FLUSH_ASSEMBLY || A->boundtocpu) PetscFunctionReturn(0); 2958a587d139SMark if (d_mat) { 29593fa6b06aSMark Adams A->offloadmask = PETSC_OFFLOAD_GPU; 29603fa6b06aSMark Adams } 29613fa6b06aSMark Adams 29629ae82921SPaul Mullowney PetscFunctionReturn(0); 29639ae82921SPaul Mullowney } 29649ae82921SPaul Mullowney 29659ae82921SPaul Mullowney /* --------------------------------------------------------------------------------*/ 2966e057df02SPaul Mullowney /*@ 29679ae82921SPaul Mullowney MatCreateSeqAIJCUSPARSE - Creates a sparse matrix in AIJ (compressed row) format 2968e057df02SPaul Mullowney (the default parallel PETSc format). This matrix will ultimately pushed down 2969e057df02SPaul Mullowney to NVidia GPUs and use the CUSPARSE library for calculations. For good matrix 2970e057df02SPaul Mullowney assembly performance the user should preallocate the matrix storage by setting 2971e057df02SPaul Mullowney the parameter nz (or the array nnz). By setting these parameters accurately, 2972e057df02SPaul Mullowney performance during matrix assembly can be increased by more than a factor of 50. 29739ae82921SPaul Mullowney 2974d083f849SBarry Smith Collective 29759ae82921SPaul Mullowney 29769ae82921SPaul Mullowney Input Parameters: 29779ae82921SPaul Mullowney + comm - MPI communicator, set to PETSC_COMM_SELF 29789ae82921SPaul Mullowney . m - number of rows 29799ae82921SPaul Mullowney . n - number of columns 29809ae82921SPaul Mullowney . nz - number of nonzeros per row (same for all rows) 29819ae82921SPaul Mullowney - nnz - array containing the number of nonzeros in the various rows 29820298fd71SBarry Smith (possibly different for each row) or NULL 29839ae82921SPaul Mullowney 29849ae82921SPaul Mullowney Output Parameter: 29859ae82921SPaul Mullowney . A - the matrix 29869ae82921SPaul Mullowney 29879ae82921SPaul Mullowney It is recommended that one use the MatCreate(), MatSetType() and/or MatSetFromOptions(), 29889ae82921SPaul Mullowney MatXXXXSetPreallocation() paradgm instead of this routine directly. 29899ae82921SPaul Mullowney [MatXXXXSetPreallocation() is, for example, MatSeqAIJSetPreallocation] 29909ae82921SPaul Mullowney 29919ae82921SPaul Mullowney Notes: 29929ae82921SPaul Mullowney If nnz is given then nz is ignored 29939ae82921SPaul Mullowney 29949ae82921SPaul Mullowney The AIJ format (also called the Yale sparse matrix format or 29959ae82921SPaul Mullowney compressed row storage), is fully compatible with standard Fortran 77 29969ae82921SPaul Mullowney storage. That is, the stored row and column indices can begin at 29979ae82921SPaul Mullowney either one (as in Fortran) or zero. See the users' manual for details. 29989ae82921SPaul Mullowney 29999ae82921SPaul Mullowney Specify the preallocated storage with either nz or nnz (not both). 30000298fd71SBarry Smith Set nz=PETSC_DEFAULT and nnz=NULL for PETSc to control dynamic memory 30019ae82921SPaul Mullowney allocation. For large problems you MUST preallocate memory or you 30029ae82921SPaul Mullowney will get TERRIBLE performance, see the users' manual chapter on matrices. 30039ae82921SPaul Mullowney 30049ae82921SPaul Mullowney By default, this format uses inodes (identical nodes) when possible, to 30059ae82921SPaul Mullowney improve numerical efficiency of matrix-vector products and solves. We 30069ae82921SPaul Mullowney search for consecutive rows with the same nonzero structure, thereby 30079ae82921SPaul Mullowney reusing matrix information to achieve increased efficiency. 30089ae82921SPaul Mullowney 30099ae82921SPaul Mullowney Level: intermediate 30109ae82921SPaul Mullowney 3011e057df02SPaul Mullowney .seealso: MatCreate(), MatCreateAIJ(), MatSetValues(), MatSeqAIJSetColumnIndices(), MatCreateSeqAIJWithArrays(), MatCreateAIJ(), MATSEQAIJCUSPARSE, MATAIJCUSPARSE 30129ae82921SPaul Mullowney @*/ 30139ae82921SPaul Mullowney PetscErrorCode MatCreateSeqAIJCUSPARSE(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt nz,const PetscInt nnz[],Mat *A) 30149ae82921SPaul Mullowney { 30159ae82921SPaul Mullowney PetscErrorCode ierr; 30169ae82921SPaul Mullowney 30179ae82921SPaul Mullowney PetscFunctionBegin; 30189ae82921SPaul Mullowney ierr = MatCreate(comm,A);CHKERRQ(ierr); 30199ae82921SPaul Mullowney ierr = MatSetSizes(*A,m,n,m,n);CHKERRQ(ierr); 30209ae82921SPaul Mullowney ierr = MatSetType(*A,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 30219ae82921SPaul Mullowney ierr = MatSeqAIJSetPreallocation_SeqAIJ(*A,nz,(PetscInt*)nnz);CHKERRQ(ierr); 30229ae82921SPaul Mullowney PetscFunctionReturn(0); 30239ae82921SPaul Mullowney } 30249ae82921SPaul Mullowney 30256fa9248bSJed Brown static PetscErrorCode MatDestroy_SeqAIJCUSPARSE(Mat A) 30269ae82921SPaul Mullowney { 30279ae82921SPaul Mullowney PetscErrorCode ierr; 30283fa6b06aSMark Adams PetscSplitCSRDataStructure *d_mat = NULL; 3029ab25e6cbSDominic Meiser 30309ae82921SPaul Mullowney PetscFunctionBegin; 30319ae82921SPaul Mullowney if (A->factortype == MAT_FACTOR_NONE) { 30323fa6b06aSMark Adams d_mat = ((Mat_SeqAIJCUSPARSE*)A->spptr)->deviceMat; 30333fa6b06aSMark Adams ((Mat_SeqAIJCUSPARSE*)A->spptr)->deviceMat = NULL; 3034470880abSPatrick Sanan ierr = MatSeqAIJCUSPARSE_Destroy((Mat_SeqAIJCUSPARSE**)&A->spptr);CHKERRQ(ierr); 30359ae82921SPaul Mullowney } else { 3036470880abSPatrick Sanan ierr = MatSeqAIJCUSPARSETriFactors_Destroy((Mat_SeqAIJCUSPARSETriFactors**)&A->spptr);CHKERRQ(ierr); 3037aa372e3fSPaul Mullowney } 30383fa6b06aSMark Adams if (d_mat) { 30393fa6b06aSMark Adams Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 30403fa6b06aSMark Adams cudaError_t err; 30413fa6b06aSMark Adams PetscSplitCSRDataStructure h_mat; 30423fa6b06aSMark Adams ierr = PetscInfo(A,"Have device matrix\n");CHKERRQ(ierr); 30433fa6b06aSMark Adams err = cudaMemcpy( &h_mat, d_mat, sizeof(PetscSplitCSRDataStructure), cudaMemcpyDeviceToHost);CHKERRCUDA(err); 30443fa6b06aSMark Adams if (a->compressedrow.use) { 30453fa6b06aSMark Adams err = cudaFree(h_mat.diag.i);CHKERRCUDA(err); 30463fa6b06aSMark Adams } 30473fa6b06aSMark Adams err = cudaFree(d_mat);CHKERRCUDA(err); 30483fa6b06aSMark Adams } 3049c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",NULL);CHKERRQ(ierr); 3050ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatCUSPARSESetFormat_C",NULL);CHKERRQ(ierr); 3051ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",NULL);CHKERRQ(ierr); 3052ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",NULL);CHKERRQ(ierr); 3053fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",NULL);CHKERRQ(ierr); 3054ccdfe979SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatFactorGetSolverType_C",NULL);CHKERRQ(ierr); 30557e8381f9SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL);CHKERRQ(ierr); 30567e8381f9SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL);CHKERRQ(ierr); 30579ae82921SPaul Mullowney ierr = MatDestroy_SeqAIJ(A);CHKERRQ(ierr); 30589ae82921SPaul Mullowney PetscFunctionReturn(0); 30599ae82921SPaul Mullowney } 30609ae82921SPaul Mullowney 3061ccdfe979SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat,MatType,MatReuse,Mat*); 306295639643SRichard Tran Mills static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat,PetscBool); 30639ff858a8SKarl Rupp static PetscErrorCode MatDuplicate_SeqAIJCUSPARSE(Mat A,MatDuplicateOption cpvalues,Mat *B) 30649ff858a8SKarl Rupp { 30659ff858a8SKarl Rupp PetscErrorCode ierr; 30669ff858a8SKarl Rupp 30679ff858a8SKarl Rupp PetscFunctionBegin; 30689ff858a8SKarl Rupp ierr = MatDuplicate_SeqAIJ(A,cpvalues,B);CHKERRQ(ierr); 3069ccdfe979SStefano Zampini ierr = MatConvert_SeqAIJ_SeqAIJCUSPARSE(*B,MATSEQAIJCUSPARSE,MAT_INPLACE_MATRIX,B);CHKERRQ(ierr); 30709ff858a8SKarl Rupp PetscFunctionReturn(0); 30719ff858a8SKarl Rupp } 30729ff858a8SKarl Rupp 3073039c6fbaSStefano Zampini static PetscErrorCode MatAXPY_SeqAIJCUSPARSE(Mat Y,PetscScalar a,Mat X,MatStructure str) 307495639643SRichard Tran Mills { 3075e6e9a74fSStefano Zampini PetscErrorCode ierr; 3076a587d139SMark Mat_SeqAIJ *x = (Mat_SeqAIJ*)X->data,*y = (Mat_SeqAIJ*)Y->data; 3077039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cy; 3078039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cx; 3079039c6fbaSStefano Zampini PetscScalar *ay; 3080039c6fbaSStefano Zampini const PetscScalar *ax; 3081039c6fbaSStefano Zampini CsrMatrix *csry,*csrx; 3082039c6fbaSStefano Zampini cudaError_t cerr; 3083e6e9a74fSStefano Zampini 308495639643SRichard Tran Mills PetscFunctionBegin; 3085*a49f1ed0SStefano Zampini cy = (Mat_SeqAIJCUSPARSE*)Y->spptr; 3086*a49f1ed0SStefano Zampini cx = (Mat_SeqAIJCUSPARSE*)X->spptr; 3087039c6fbaSStefano Zampini if (X->ops->axpy != Y->ops->axpy) { 3088*a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(Y,PETSC_FALSE);CHKERRQ(ierr); 3089a587d139SMark ierr = MatAXPY_SeqAIJ(Y,a,X,str);CHKERRQ(ierr); 3090a587d139SMark PetscFunctionReturn(0); 309195639643SRichard Tran Mills } 3092039c6fbaSStefano Zampini /* if we are here, it means both matrices are bound to GPU */ 3093a587d139SMark ierr = MatSeqAIJCUSPARSECopyToGPU(Y);CHKERRQ(ierr); 3094a587d139SMark ierr = MatSeqAIJCUSPARSECopyToGPU(X);CHKERRQ(ierr); 3095039c6fbaSStefano Zampini if (cy->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)Y),PETSC_ERR_PLIB,"only MAT_CUSPARSE_CSR supported"); 3096039c6fbaSStefano Zampini if (cx->format != MAT_CUSPARSE_CSR) SETERRQ(PetscObjectComm((PetscObject)X),PETSC_ERR_PLIB,"only MAT_CUSPARSE_CSR supported"); 3097039c6fbaSStefano Zampini csry = (CsrMatrix*)cy->mat->mat; 3098039c6fbaSStefano Zampini csrx = (CsrMatrix*)cx->mat->mat; 3099039c6fbaSStefano Zampini /* see if we can turn this into a cublas axpy */ 3100039c6fbaSStefano Zampini if (str != SAME_NONZERO_PATTERN && x->nz == y->nz && !x->compressedrow.use && !y->compressedrow.use) { 3101039c6fbaSStefano Zampini bool eq = thrust::equal(thrust::device,csry->row_offsets->begin(),csry->row_offsets->end(),csrx->row_offsets->begin()); 3102039c6fbaSStefano Zampini if (eq) { 3103039c6fbaSStefano Zampini eq = thrust::equal(thrust::device,csry->column_indices->begin(),csry->column_indices->end(),csrx->column_indices->begin()); 3104039c6fbaSStefano Zampini } 3105039c6fbaSStefano Zampini if (eq) str = SAME_NONZERO_PATTERN; 3106039c6fbaSStefano Zampini } 3107d2be01edSStefano Zampini /* spgeam is buggy with one column */ 3108d2be01edSStefano Zampini if (Y->cmap->n == 1 && str != SAME_NONZERO_PATTERN) str = DIFFERENT_NONZERO_PATTERN; 3109039c6fbaSStefano Zampini 3110039c6fbaSStefano Zampini if (str == SUBSET_NONZERO_PATTERN) { 3111039c6fbaSStefano Zampini cusparseStatus_t stat; 3112039c6fbaSStefano Zampini PetscScalar b = 1.0; 3113039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3114039c6fbaSStefano Zampini size_t bufferSize; 3115039c6fbaSStefano Zampini void *buffer; 3116039c6fbaSStefano Zampini #endif 3117039c6fbaSStefano Zampini 3118039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(X,&ax);CHKERRQ(ierr); 3119039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 3120039c6fbaSStefano Zampini stat = cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_HOST);CHKERRCUSPARSE(stat); 3121039c6fbaSStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3122039c6fbaSStefano Zampini stat = cusparse_csr_spgeam_bufferSize(cy->handle,Y->rmap->n,Y->cmap->n, 3123039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3124039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3125039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get(),&bufferSize);CHKERRCUSPARSE(stat); 3126039c6fbaSStefano Zampini cerr = cudaMalloc(&buffer,bufferSize);CHKERRCUDA(cerr); 3127039c6fbaSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3128039c6fbaSStefano Zampini stat = cusparse_csr_spgeam(cy->handle,Y->rmap->n,Y->cmap->n, 3129039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3130039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3131039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get(),buffer);CHKERRCUSPARSE(stat); 3132039c6fbaSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 3133039c6fbaSStefano Zampini ierr = PetscLogGpuFlops(x->nz + y->nz);CHKERRQ(ierr); 3134039c6fbaSStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3135039c6fbaSStefano Zampini cerr = cudaFree(buffer);CHKERRCUDA(cerr); 3136039c6fbaSStefano Zampini #else 3137039c6fbaSStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3138039c6fbaSStefano Zampini stat = cusparse_csr_spgeam(cy->handle,Y->rmap->n,Y->cmap->n, 3139039c6fbaSStefano Zampini &a,cx->mat->descr,x->nz,ax,csrx->row_offsets->data().get(),csrx->column_indices->data().get(), 3140039c6fbaSStefano Zampini &b,cy->mat->descr,y->nz,ay,csry->row_offsets->data().get(),csry->column_indices->data().get(), 3141039c6fbaSStefano Zampini cy->mat->descr, ay,csry->row_offsets->data().get(),csry->column_indices->data().get());CHKERRCUSPARSE(stat); 3142039c6fbaSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 3143039c6fbaSStefano Zampini ierr = PetscLogGpuFlops(x->nz + y->nz);CHKERRQ(ierr); 3144039c6fbaSStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3145039c6fbaSStefano Zampini #endif 3146039c6fbaSStefano Zampini stat = cusparseSetPointerMode(cy->handle, CUSPARSE_POINTER_MODE_DEVICE);CHKERRCUSPARSE(stat); 3147039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(X,&ax);CHKERRQ(ierr); 3148039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 3149039c6fbaSStefano Zampini ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 3150039c6fbaSStefano Zampini } else if (str == SAME_NONZERO_PATTERN) { 3151a587d139SMark cublasHandle_t cublasv2handle; 3152039c6fbaSStefano Zampini cublasStatus_t berr; 3153a587d139SMark PetscBLASInt one = 1, bnz = 1; 3154039c6fbaSStefano Zampini 3155039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(X,&ax);CHKERRQ(ierr); 3156039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 3157a587d139SMark ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 3158a587d139SMark ierr = PetscBLASIntCast(x->nz,&bnz);CHKERRQ(ierr); 3159a587d139SMark ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3160039c6fbaSStefano Zampini berr = cublasXaxpy(cublasv2handle,bnz,&a,ax,one,ay,one);CHKERRCUBLAS(berr); 3161039c6fbaSStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 3162a587d139SMark ierr = PetscLogGpuFlops(2.0*bnz);CHKERRQ(ierr); 3163a587d139SMark ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3164039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(X,&ax);CHKERRQ(ierr); 3165039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 3166a587d139SMark ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 3167039c6fbaSStefano Zampini } else { 3168*a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(Y,PETSC_FALSE);CHKERRQ(ierr); 3169d2be01edSStefano Zampini ierr = MatAXPY_SeqAIJ(Y,a,X,str);CHKERRQ(ierr); 3170a587d139SMark } 317195639643SRichard Tran Mills PetscFunctionReturn(0); 317295639643SRichard Tran Mills } 317395639643SRichard Tran Mills 317433c9ba73SStefano Zampini static PetscErrorCode MatScale_SeqAIJCUSPARSE(Mat Y,PetscScalar a) 317533c9ba73SStefano Zampini { 317633c9ba73SStefano Zampini PetscErrorCode ierr; 317733c9ba73SStefano Zampini Mat_SeqAIJ *y = (Mat_SeqAIJ*)Y->data; 317833c9ba73SStefano Zampini PetscScalar *ay; 317933c9ba73SStefano Zampini cudaError_t cerr; 318033c9ba73SStefano Zampini cublasHandle_t cublasv2handle; 318133c9ba73SStefano Zampini cublasStatus_t berr; 318233c9ba73SStefano Zampini PetscBLASInt one = 1, bnz = 1; 318333c9ba73SStefano Zampini 318433c9ba73SStefano Zampini PetscFunctionBegin; 318533c9ba73SStefano Zampini ierr = MatSeqAIJCUSPARSEGetArray(Y,&ay);CHKERRQ(ierr); 318633c9ba73SStefano Zampini ierr = PetscCUBLASGetHandle(&cublasv2handle);CHKERRQ(ierr); 318733c9ba73SStefano Zampini ierr = PetscBLASIntCast(y->nz,&bnz);CHKERRQ(ierr); 318833c9ba73SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 318933c9ba73SStefano Zampini berr = cublasXscal(cublasv2handle,bnz,&a,ay,one);CHKERRCUBLAS(berr); 319033c9ba73SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 319133c9ba73SStefano Zampini ierr = PetscLogGpuFlops(bnz);CHKERRQ(ierr); 319233c9ba73SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 319333c9ba73SStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArray(Y,&ay);CHKERRQ(ierr); 319433c9ba73SStefano Zampini ierr = MatSeqAIJInvalidateDiagonal(Y);CHKERRQ(ierr); 319533c9ba73SStefano Zampini PetscFunctionReturn(0); 319633c9ba73SStefano Zampini } 319733c9ba73SStefano Zampini 31983fa6b06aSMark Adams static PetscErrorCode MatZeroEntries_SeqAIJCUSPARSE(Mat A) 31993fa6b06aSMark Adams { 32003fa6b06aSMark Adams PetscErrorCode ierr; 32017e8381f9SStefano Zampini PetscBool both = PETSC_FALSE; 3202a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 32037e8381f9SStefano Zampini 32043fa6b06aSMark Adams PetscFunctionBegin; 32053fa6b06aSMark Adams if (A->factortype == MAT_FACTOR_NONE) { 32063fa6b06aSMark Adams Mat_SeqAIJCUSPARSE *spptr = (Mat_SeqAIJCUSPARSE*)A->spptr; 32077e8381f9SStefano Zampini if (spptr->mat) { 32087e8381f9SStefano Zampini CsrMatrix* matrix = (CsrMatrix*)spptr->mat->mat; 32097e8381f9SStefano Zampini if (matrix->values) { 32107e8381f9SStefano Zampini both = PETSC_TRUE; 32117e8381f9SStefano Zampini thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 32127e8381f9SStefano Zampini } 32137e8381f9SStefano Zampini } 32147e8381f9SStefano Zampini if (spptr->matTranspose) { 32157e8381f9SStefano Zampini CsrMatrix* matrix = (CsrMatrix*)spptr->matTranspose->mat; 32167e8381f9SStefano Zampini if (matrix->values) { 32177e8381f9SStefano Zampini thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 32187e8381f9SStefano Zampini } 32197e8381f9SStefano Zampini } 32203fa6b06aSMark Adams } 3221a587d139SMark //ierr = MatZeroEntries_SeqAIJ(A);CHKERRQ(ierr); 3222a587d139SMark ierr = PetscArrayzero(a->a,a->i[A->rmap->n]);CHKERRQ(ierr); 3223a587d139SMark ierr = MatSeqAIJInvalidateDiagonal(A);CHKERRQ(ierr); 32247e8381f9SStefano Zampini if (both) A->offloadmask = PETSC_OFFLOAD_BOTH; 3225a587d139SMark else A->offloadmask = PETSC_OFFLOAD_CPU; 32263fa6b06aSMark Adams 32273fa6b06aSMark Adams PetscFunctionReturn(0); 32283fa6b06aSMark Adams } 32293fa6b06aSMark Adams 3230a587d139SMark static PetscErrorCode MatBindToCPU_SeqAIJCUSPARSE(Mat A,PetscBool flg) 3231a587d139SMark { 3232a587d139SMark Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3233a587d139SMark PetscErrorCode ierr; 3234a587d139SMark 3235a587d139SMark PetscFunctionBegin; 3236a587d139SMark if (A->factortype != MAT_FACTOR_NONE) PetscFunctionReturn(0); 3237a587d139SMark if (flg) { 3238a587d139SMark ierr = MatSeqAIJCUSPARSECopyFromGPU(A);CHKERRQ(ierr); 3239a587d139SMark 324033c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJ; 3241a587d139SMark A->ops->axpy = MatAXPY_SeqAIJ; 3242a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJ; 3243a587d139SMark A->ops->mult = MatMult_SeqAIJ; 3244a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJ; 3245a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJ; 3246a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJ; 3247a587d139SMark A->ops->multhermitiantranspose = NULL; 3248a587d139SMark A->ops->multhermitiantransposeadd = NULL; 3249fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJ; 3250c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",NULL);CHKERRQ(ierr); 3251a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",NULL);CHKERRQ(ierr); 3252a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",NULL);CHKERRQ(ierr); 3253a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",NULL);CHKERRQ(ierr); 3254a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",NULL);CHKERRQ(ierr); 3255a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJGetArray_C",MatSeqAIJGetArray_SeqAIJ);CHKERRQ(ierr); 3256fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",NULL);CHKERRQ(ierr); 3257a587d139SMark } else { 325833c9ba73SStefano Zampini A->ops->scale = MatScale_SeqAIJCUSPARSE; 3259a587d139SMark A->ops->axpy = MatAXPY_SeqAIJCUSPARSE; 3260a587d139SMark A->ops->zeroentries = MatZeroEntries_SeqAIJCUSPARSE; 3261a587d139SMark A->ops->mult = MatMult_SeqAIJCUSPARSE; 3262a587d139SMark A->ops->multadd = MatMultAdd_SeqAIJCUSPARSE; 3263a587d139SMark A->ops->multtranspose = MatMultTranspose_SeqAIJCUSPARSE; 3264a587d139SMark A->ops->multtransposeadd = MatMultTransposeAdd_SeqAIJCUSPARSE; 3265a587d139SMark A->ops->multhermitiantranspose = MatMultHermitianTranspose_SeqAIJCUSPARSE; 3266a587d139SMark A->ops->multhermitiantransposeadd = MatMultHermitianTransposeAdd_SeqAIJCUSPARSE; 3267fcdce8c4SStefano Zampini A->ops->productsetfromoptions = MatProductSetFromOptions_SeqAIJCUSPARSE; 3268c215019aSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJCopySubArray_C",MatSeqAIJCopySubArray_SeqAIJCUSPARSE);CHKERRQ(ierr); 3269a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdensecuda_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3270a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqdense_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3271a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetPreallocationCOO_C",MatSetPreallocationCOO_SeqAIJCUSPARSE);CHKERRQ(ierr); 3272a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSetValuesCOO_C",MatSetValuesCOO_SeqAIJCUSPARSE);CHKERRQ(ierr); 3273a587d139SMark ierr = PetscObjectComposeFunction((PetscObject)A,"MatSeqAIJGetArray_C",MatSeqAIJGetArray_SeqAIJCUSPARSE);CHKERRQ(ierr); 3274fcdce8c4SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatProductSetFromOptions_seqaijcusparse_seqaijcusparse_C",MatProductSetFromOptions_SeqAIJCUSPARSE);CHKERRQ(ierr); 3275a587d139SMark } 3276a587d139SMark A->boundtocpu = flg; 3277a587d139SMark a->inode.use = flg; 3278a587d139SMark PetscFunctionReturn(0); 3279a587d139SMark } 3280a587d139SMark 328149735bf3SStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_SeqAIJ_SeqAIJCUSPARSE(Mat A, MatType mtype, MatReuse reuse, Mat* newmat) 32829ae82921SPaul Mullowney { 32839ae82921SPaul Mullowney PetscErrorCode ierr; 3284aa372e3fSPaul Mullowney cusparseStatus_t stat; 328549735bf3SStefano Zampini Mat B; 32869ae82921SPaul Mullowney 32879ae82921SPaul Mullowney PetscFunctionBegin; 3288832b2c02SStefano Zampini ierr = PetscCUDAInitializeCheck();CHKERRQ(ierr); /* first use of CUSPARSE may be via MatConvert */ 328949735bf3SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 329049735bf3SStefano Zampini ierr = MatDuplicate(A,MAT_COPY_VALUES,newmat);CHKERRQ(ierr); 329149735bf3SStefano Zampini } else if (reuse == MAT_REUSE_MATRIX) { 329249735bf3SStefano Zampini ierr = MatCopy(A,*newmat,SAME_NONZERO_PATTERN);CHKERRQ(ierr); 329349735bf3SStefano Zampini } 329449735bf3SStefano Zampini B = *newmat; 329549735bf3SStefano Zampini 329634136279SStefano Zampini ierr = PetscFree(B->defaultvectype);CHKERRQ(ierr); 329734136279SStefano Zampini ierr = PetscStrallocpy(VECCUDA,&B->defaultvectype);CHKERRQ(ierr); 329834136279SStefano Zampini 329949735bf3SStefano Zampini if (reuse != MAT_REUSE_MATRIX && !B->spptr) { 33009ae82921SPaul Mullowney if (B->factortype == MAT_FACTOR_NONE) { 3301e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSE *spptr; 3302e6e9a74fSStefano Zampini 3303e6e9a74fSStefano Zampini ierr = PetscNew(&spptr);CHKERRQ(ierr); 3304e6e9a74fSStefano Zampini spptr->format = MAT_CUSPARSE_CSR; 3305e6e9a74fSStefano Zampini stat = cusparseCreate(&spptr->handle);CHKERRCUSPARSE(stat); 3306e6e9a74fSStefano Zampini B->spptr = spptr; 33073fa6b06aSMark Adams spptr->deviceMat = NULL; 33089ae82921SPaul Mullowney } else { 3309e6e9a74fSStefano Zampini Mat_SeqAIJCUSPARSETriFactors *spptr; 3310e6e9a74fSStefano Zampini 3311e6e9a74fSStefano Zampini ierr = PetscNew(&spptr);CHKERRQ(ierr); 3312e6e9a74fSStefano Zampini stat = cusparseCreate(&spptr->handle);CHKERRCUSPARSE(stat); 3313e6e9a74fSStefano Zampini B->spptr = spptr; 33149ae82921SPaul Mullowney } 3315e6e9a74fSStefano Zampini B->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 331649735bf3SStefano Zampini } 3317693b0035SStefano Zampini B->ops->assemblyend = MatAssemblyEnd_SeqAIJCUSPARSE; 33189ae82921SPaul Mullowney B->ops->destroy = MatDestroy_SeqAIJCUSPARSE; 33199ae82921SPaul Mullowney B->ops->setfromoptions = MatSetFromOptions_SeqAIJCUSPARSE; 332095639643SRichard Tran Mills B->ops->bindtocpu = MatBindToCPU_SeqAIJCUSPARSE; 3321693b0035SStefano Zampini B->ops->duplicate = MatDuplicate_SeqAIJCUSPARSE; 33222205254eSKarl Rupp 3323e6e9a74fSStefano Zampini ierr = MatBindToCPU_SeqAIJCUSPARSE(B,PETSC_FALSE);CHKERRQ(ierr); 33249ae82921SPaul Mullowney ierr = PetscObjectChangeTypeName((PetscObject)B,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 3325bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatCUSPARSESetFormat_C",MatCUSPARSESetFormat_SeqAIJCUSPARSE);CHKERRQ(ierr); 33269ae82921SPaul Mullowney PetscFunctionReturn(0); 33279ae82921SPaul Mullowney } 33289ae82921SPaul Mullowney 332902fe1965SBarry Smith PETSC_EXTERN PetscErrorCode MatCreate_SeqAIJCUSPARSE(Mat B) 333002fe1965SBarry Smith { 333102fe1965SBarry Smith PetscErrorCode ierr; 333202fe1965SBarry Smith 333302fe1965SBarry Smith PetscFunctionBegin; 333402fe1965SBarry Smith ierr = MatCreate_SeqAIJ(B);CHKERRQ(ierr); 33350ce8acdeSStefano Zampini ierr = MatConvert_SeqAIJ_SeqAIJCUSPARSE(B,MATSEQAIJCUSPARSE,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr); 3336afb2bd1cSJunchao Zhang ierr = PetscObjectOptionsBegin((PetscObject)B);CHKERRQ(ierr); 3337afb2bd1cSJunchao Zhang ierr = MatSetFromOptions_SeqAIJCUSPARSE(PetscOptionsObject,B);CHKERRQ(ierr); 3338afb2bd1cSJunchao Zhang ierr = PetscOptionsEnd();CHKERRQ(ierr); 333902fe1965SBarry Smith PetscFunctionReturn(0); 334002fe1965SBarry Smith } 334102fe1965SBarry Smith 33423ca39a21SBarry Smith /*MC 3343e057df02SPaul Mullowney MATSEQAIJCUSPARSE - MATAIJCUSPARSE = "(seq)aijcusparse" - A matrix type to be used for sparse matrices. 3344e057df02SPaul Mullowney 3345e057df02SPaul Mullowney A matrix type type whose data resides on Nvidia GPUs. These matrices can be in either 33462692e278SPaul Mullowney CSR, ELL, or Hybrid format. The ELL and HYB formats require CUDA 4.2 or later. 33472692e278SPaul Mullowney All matrix calculations are performed on Nvidia GPUs using the CUSPARSE library. 3348e057df02SPaul Mullowney 3349e057df02SPaul Mullowney Options Database Keys: 3350e057df02SPaul Mullowney + -mat_type aijcusparse - sets the matrix type to "seqaijcusparse" during a call to MatSetFromOptions() 3351aa372e3fSPaul Mullowney . -mat_cusparse_storage_format csr - sets the storage format of matrices (for MatMult and factors in MatSolve) during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 3352a2b725a8SWilliam Gropp - -mat_cusparse_mult_storage_format csr - sets the storage format of matrices (for MatMult) during a call to MatSetFromOptions(). Other options include ell (ellpack) or hyb (hybrid). 3353e057df02SPaul Mullowney 3354e057df02SPaul Mullowney Level: beginner 3355e057df02SPaul Mullowney 33568468deeeSKarl Rupp .seealso: MatCreateSeqAIJCUSPARSE(), MATAIJCUSPARSE, MatCreateAIJCUSPARSE(), MatCUSPARSESetFormat(), MatCUSPARSEStorageFormat, MatCUSPARSEFormatOperation 3357e057df02SPaul Mullowney M*/ 33587f756511SDominic Meiser 335942c9c57cSBarry Smith PETSC_EXTERN PetscErrorCode MatGetFactor_seqaijcusparse_cusparse(Mat,MatFactorType,Mat*); 336042c9c57cSBarry Smith 33610f39cd5aSBarry Smith 33623ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_CUSPARSE(void) 336342c9c57cSBarry Smith { 336442c9c57cSBarry Smith PetscErrorCode ierr; 336542c9c57cSBarry Smith 336642c9c57cSBarry Smith PetscFunctionBegin; 33673ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_LU,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 33683ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_CHOLESKY,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 33693ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_ILU,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 33703ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCUSPARSE,MATSEQAIJCUSPARSE,MAT_FACTOR_ICC,MatGetFactor_seqaijcusparse_cusparse);CHKERRQ(ierr); 337142c9c57cSBarry Smith PetscFunctionReturn(0); 337242c9c57cSBarry Smith } 337329b38603SBarry Smith 3374470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSE_Destroy(Mat_SeqAIJCUSPARSE **cusparsestruct) 33757f756511SDominic Meiser { 3376e6e9a74fSStefano Zampini PetscErrorCode ierr; 33777f756511SDominic Meiser cusparseStatus_t stat; 33787f756511SDominic Meiser 33797f756511SDominic Meiser PetscFunctionBegin; 33807f756511SDominic Meiser if (*cusparsestruct) { 3381e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->mat,(*cusparsestruct)->format);CHKERRQ(ierr); 3382e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*cusparsestruct)->matTranspose,(*cusparsestruct)->format);CHKERRQ(ierr); 33837f756511SDominic Meiser delete (*cusparsestruct)->workVector; 338481902715SJunchao Zhang delete (*cusparsestruct)->rowoffsets_gpu; 33857e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm; 33867e8381f9SStefano Zampini delete (*cusparsestruct)->cooPerm_a; 3387*a49f1ed0SStefano Zampini delete (*cusparsestruct)->csr2csc_i; 33887e8381f9SStefano Zampini if ((*cusparsestruct)->handle) {stat = cusparseDestroy((*cusparsestruct)->handle);CHKERRCUSPARSE(stat);} 3389e6e9a74fSStefano Zampini ierr = PetscFree(*cusparsestruct);CHKERRQ(ierr); 33907f756511SDominic Meiser } 33917f756511SDominic Meiser PetscFunctionReturn(0); 33927f756511SDominic Meiser } 33937f756511SDominic Meiser 33947f756511SDominic Meiser static PetscErrorCode CsrMatrix_Destroy(CsrMatrix **mat) 33957f756511SDominic Meiser { 33967f756511SDominic Meiser PetscFunctionBegin; 33977f756511SDominic Meiser if (*mat) { 33987f756511SDominic Meiser delete (*mat)->values; 33997f756511SDominic Meiser delete (*mat)->column_indices; 34007f756511SDominic Meiser delete (*mat)->row_offsets; 34017f756511SDominic Meiser delete *mat; 34027f756511SDominic Meiser *mat = 0; 34037f756511SDominic Meiser } 34047f756511SDominic Meiser PetscFunctionReturn(0); 34057f756511SDominic Meiser } 34067f756511SDominic Meiser 3407470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSETriFactorStruct **trifactor) 34087f756511SDominic Meiser { 34097f756511SDominic Meiser cusparseStatus_t stat; 34107f756511SDominic Meiser PetscErrorCode ierr; 34117f756511SDominic Meiser 34127f756511SDominic Meiser PetscFunctionBegin; 34137f756511SDominic Meiser if (*trifactor) { 341457d48284SJunchao Zhang if ((*trifactor)->descr) { stat = cusparseDestroyMatDescr((*trifactor)->descr);CHKERRCUSPARSE(stat); } 3415afb2bd1cSJunchao Zhang if ((*trifactor)->solveInfo) { stat = cusparse_destroy_analysis_info((*trifactor)->solveInfo);CHKERRCUSPARSE(stat); } 34167f756511SDominic Meiser ierr = CsrMatrix_Destroy(&(*trifactor)->csrMat);CHKERRQ(ierr); 34171b0a6780SStefano Zampini if ((*trifactor)->solveBuffer) {cudaError_t cerr = cudaFree((*trifactor)->solveBuffer);CHKERRCUDA(cerr);} 34182cbc15d9SMark if ((*trifactor)->AA_h) {cudaError_t cerr = cudaFreeHost((*trifactor)->AA_h);CHKERRCUDA(cerr);} 3419afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 34201b0a6780SStefano Zampini if ((*trifactor)->csr2cscBuffer) {cudaError_t cerr = cudaFree((*trifactor)->csr2cscBuffer);CHKERRCUDA(cerr);} 3421afb2bd1cSJunchao Zhang #endif 3422da79fbbcSStefano Zampini ierr = PetscFree(*trifactor);CHKERRQ(ierr); 34237f756511SDominic Meiser } 34247f756511SDominic Meiser PetscFunctionReturn(0); 34257f756511SDominic Meiser } 34267f756511SDominic Meiser 3427470880abSPatrick Sanan static PetscErrorCode MatSeqAIJCUSPARSEMultStruct_Destroy(Mat_SeqAIJCUSPARSEMultStruct **matstruct,MatCUSPARSEStorageFormat format) 34287f756511SDominic Meiser { 34297f756511SDominic Meiser CsrMatrix *mat; 34307f756511SDominic Meiser cusparseStatus_t stat; 34317f756511SDominic Meiser cudaError_t err; 34327f756511SDominic Meiser 34337f756511SDominic Meiser PetscFunctionBegin; 34347f756511SDominic Meiser if (*matstruct) { 34357f756511SDominic Meiser if ((*matstruct)->mat) { 34367f756511SDominic Meiser if (format==MAT_CUSPARSE_ELL || format==MAT_CUSPARSE_HYB) { 3437afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3438afb2bd1cSJunchao Zhang SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_CUSPARSE_ELL and MAT_CUSPARSE_HYB are not supported since CUDA-11.0"); 3439afb2bd1cSJunchao Zhang #else 34407f756511SDominic Meiser cusparseHybMat_t hybMat = (cusparseHybMat_t)(*matstruct)->mat; 344157d48284SJunchao Zhang stat = cusparseDestroyHybMat(hybMat);CHKERRCUSPARSE(stat); 3442afb2bd1cSJunchao Zhang #endif 34437f756511SDominic Meiser } else { 34447f756511SDominic Meiser mat = (CsrMatrix*)(*matstruct)->mat; 34457f756511SDominic Meiser CsrMatrix_Destroy(&mat); 34467f756511SDominic Meiser } 34477f756511SDominic Meiser } 344857d48284SJunchao Zhang if ((*matstruct)->descr) { stat = cusparseDestroyMatDescr((*matstruct)->descr);CHKERRCUSPARSE(stat); } 34497f756511SDominic Meiser delete (*matstruct)->cprowIndices; 3450afb2bd1cSJunchao Zhang if ((*matstruct)->alpha_one) { err=cudaFree((*matstruct)->alpha_one);CHKERRCUDA(err); } 34517656d835SStefano Zampini if ((*matstruct)->beta_zero) { err=cudaFree((*matstruct)->beta_zero);CHKERRCUDA(err); } 34527656d835SStefano Zampini if ((*matstruct)->beta_one) { err=cudaFree((*matstruct)->beta_one);CHKERRCUDA(err); } 3453afb2bd1cSJunchao Zhang 3454afb2bd1cSJunchao Zhang #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 3455afb2bd1cSJunchao Zhang Mat_SeqAIJCUSPARSEMultStruct *mdata = *matstruct; 3456afb2bd1cSJunchao Zhang if (mdata->matDescr) {stat = cusparseDestroySpMat(mdata->matDescr);CHKERRCUSPARSE(stat);} 3457afb2bd1cSJunchao Zhang for (int i=0; i<3; i++) { 3458afb2bd1cSJunchao Zhang if (mdata->cuSpMV[i].initialized) { 3459afb2bd1cSJunchao Zhang err = cudaFree(mdata->cuSpMV[i].spmvBuffer);CHKERRCUDA(err); 3460afb2bd1cSJunchao Zhang stat = cusparseDestroyDnVec(mdata->cuSpMV[i].vecXDescr);CHKERRCUSPARSE(stat); 3461afb2bd1cSJunchao Zhang stat = cusparseDestroyDnVec(mdata->cuSpMV[i].vecYDescr);CHKERRCUSPARSE(stat); 3462afb2bd1cSJunchao Zhang } 3463afb2bd1cSJunchao Zhang } 3464afb2bd1cSJunchao Zhang #endif 34657f756511SDominic Meiser delete *matstruct; 34667e8381f9SStefano Zampini *matstruct = NULL; 34677f756511SDominic Meiser } 34687f756511SDominic Meiser PetscFunctionReturn(0); 34697f756511SDominic Meiser } 34707f756511SDominic Meiser 3471ccdfe979SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Reset(Mat_SeqAIJCUSPARSETriFactors** trifactors) 34727f756511SDominic Meiser { 3473e6e9a74fSStefano Zampini PetscErrorCode ierr; 3474e6e9a74fSStefano Zampini 34757f756511SDominic Meiser PetscFunctionBegin; 34767f756511SDominic Meiser if (*trifactors) { 3477e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->loTriFactorPtr);CHKERRQ(ierr); 3478e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->upTriFactorPtr);CHKERRQ(ierr); 3479e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->loTriFactorPtrTranspose);CHKERRQ(ierr); 3480e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&(*trifactors)->upTriFactorPtrTranspose);CHKERRQ(ierr); 34817f756511SDominic Meiser delete (*trifactors)->rpermIndices; 34827f756511SDominic Meiser delete (*trifactors)->cpermIndices; 34837f756511SDominic Meiser delete (*trifactors)->workVector; 34847e8381f9SStefano Zampini (*trifactors)->rpermIndices = NULL; 34857e8381f9SStefano Zampini (*trifactors)->cpermIndices = NULL; 34867e8381f9SStefano Zampini (*trifactors)->workVector = NULL; 3487ccdfe979SStefano Zampini } 3488ccdfe979SStefano Zampini PetscFunctionReturn(0); 3489ccdfe979SStefano Zampini } 3490ccdfe979SStefano Zampini 3491ccdfe979SStefano Zampini static PetscErrorCode MatSeqAIJCUSPARSETriFactors_Destroy(Mat_SeqAIJCUSPARSETriFactors** trifactors) 3492ccdfe979SStefano Zampini { 3493e6e9a74fSStefano Zampini PetscErrorCode ierr; 3494ccdfe979SStefano Zampini cusparseHandle_t handle; 3495ccdfe979SStefano Zampini cusparseStatus_t stat; 3496ccdfe979SStefano Zampini 3497ccdfe979SStefano Zampini PetscFunctionBegin; 3498ccdfe979SStefano Zampini if (*trifactors) { 3499e6e9a74fSStefano Zampini ierr = MatSeqAIJCUSPARSETriFactors_Reset(trifactors);CHKERRQ(ierr); 35007f756511SDominic Meiser if (handle = (*trifactors)->handle) { 350157d48284SJunchao Zhang stat = cusparseDestroy(handle);CHKERRCUSPARSE(stat); 35027f756511SDominic Meiser } 3503e6e9a74fSStefano Zampini ierr = PetscFree(*trifactors);CHKERRQ(ierr); 35047f756511SDominic Meiser } 35057f756511SDominic Meiser PetscFunctionReturn(0); 35067f756511SDominic Meiser } 35077e8381f9SStefano Zampini 35087e8381f9SStefano Zampini struct IJCompare 35097e8381f9SStefano Zampini { 35107e8381f9SStefano Zampini __host__ __device__ 35117e8381f9SStefano Zampini inline bool operator() (const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 35127e8381f9SStefano Zampini { 35137e8381f9SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 35147e8381f9SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 35157e8381f9SStefano Zampini return false; 35167e8381f9SStefano Zampini } 35177e8381f9SStefano Zampini }; 35187e8381f9SStefano Zampini 35197e8381f9SStefano Zampini struct IJEqual 35207e8381f9SStefano Zampini { 35217e8381f9SStefano Zampini __host__ __device__ 35227e8381f9SStefano Zampini inline bool operator() (const thrust::tuple<PetscInt, PetscInt> &t1, const thrust::tuple<PetscInt, PetscInt> &t2) 35237e8381f9SStefano Zampini { 35247e8381f9SStefano Zampini if (t1.get<0>() != t2.get<0>() || t1.get<1>() != t2.get<1>()) return false; 35257e8381f9SStefano Zampini return true; 35267e8381f9SStefano Zampini } 35277e8381f9SStefano Zampini }; 35287e8381f9SStefano Zampini 35297e8381f9SStefano Zampini struct IJDiff 35307e8381f9SStefano Zampini { 35317e8381f9SStefano Zampini __host__ __device__ 35327e8381f9SStefano Zampini inline PetscInt operator() (const PetscInt &t1, const PetscInt &t2) 35337e8381f9SStefano Zampini { 35347e8381f9SStefano Zampini return t1 == t2 ? 0 : 1; 35357e8381f9SStefano Zampini } 35367e8381f9SStefano Zampini }; 35377e8381f9SStefano Zampini 35387e8381f9SStefano Zampini struct IJSum 35397e8381f9SStefano Zampini { 35407e8381f9SStefano Zampini __host__ __device__ 35417e8381f9SStefano Zampini inline PetscInt operator() (const PetscInt &t1, const PetscInt &t2) 35427e8381f9SStefano Zampini { 35437e8381f9SStefano Zampini return t1||t2; 35447e8381f9SStefano Zampini } 35457e8381f9SStefano Zampini }; 35467e8381f9SStefano Zampini 35477e8381f9SStefano Zampini #include <thrust/iterator/discard_iterator.h> 3548e61fc153SStefano Zampini PetscErrorCode MatSetValuesCOO_SeqAIJCUSPARSE(Mat A, const PetscScalar v[], InsertMode imode) 35497e8381f9SStefano Zampini { 35507e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3551fcdce8c4SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 3552bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_v = NULL; 355308391a17SStefano Zampini thrust::device_ptr<const PetscScalar> d_v; 35547e8381f9SStefano Zampini CsrMatrix *matrix; 35557e8381f9SStefano Zampini PetscErrorCode ierr; 35567e8381f9SStefano Zampini cudaError_t cerr; 35577e8381f9SStefano Zampini PetscInt n; 35587e8381f9SStefano Zampini 35597e8381f9SStefano Zampini PetscFunctionBegin; 35607e8381f9SStefano Zampini if (!cusp) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUSPARSE struct"); 35617e8381f9SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUSPARSE CsrMatrix"); 35627e8381f9SStefano Zampini if (!cusp->cooPerm) { 35637e8381f9SStefano Zampini ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 35647e8381f9SStefano Zampini ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 35657e8381f9SStefano Zampini PetscFunctionReturn(0); 35667e8381f9SStefano Zampini } 35677e8381f9SStefano Zampini matrix = (CsrMatrix*)cusp->mat->mat; 35687e8381f9SStefano Zampini if (!matrix->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3569e61fc153SStefano Zampini if (!v) { 3570e61fc153SStefano Zampini if (imode == INSERT_VALUES) thrust::fill(thrust::device,matrix->values->begin(),matrix->values->end(),0.); 3571e61fc153SStefano Zampini goto finalize; 35727e8381f9SStefano Zampini } 3573e61fc153SStefano Zampini n = cusp->cooPerm->size(); 357408391a17SStefano Zampini if (isCudaMem(v)) { 357508391a17SStefano Zampini d_v = thrust::device_pointer_cast(v); 357608391a17SStefano Zampini } else { 3577e61fc153SStefano Zampini cooPerm_v = new THRUSTARRAY(n); 3578e61fc153SStefano Zampini cooPerm_v->assign(v,v+n); 357908391a17SStefano Zampini d_v = cooPerm_v->data(); 3580e61fc153SStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscScalar));CHKERRQ(ierr); 358108391a17SStefano Zampini } 3582bfcc3627SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 3583e61fc153SStefano Zampini if (imode == ADD_VALUES) { /* ADD VALUES means add to existing ones */ 35847e8381f9SStefano Zampini if (cusp->cooPerm_a) { 3585bfcc3627SStefano Zampini THRUSTARRAY *cooPerm_w = new THRUSTARRAY(matrix->values->size()); 358608391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()); 3587e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),vbit,thrust::make_discard_iterator(),cooPerm_w->begin(),thrust::equal_to<PetscInt>(),thrust::plus<PetscScalar>()); 3588e61fc153SStefano Zampini thrust::transform(cooPerm_w->begin(),cooPerm_w->end(),matrix->values->begin(),matrix->values->begin(),thrust::plus<PetscScalar>()); 3589e61fc153SStefano Zampini delete cooPerm_w; 35907e8381f9SStefano Zampini } else { 359108391a17SStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()), 35927e8381f9SStefano Zampini matrix->values->begin())); 359308391a17SStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->end()), 35947e8381f9SStefano Zampini matrix->values->end())); 35957e8381f9SStefano Zampini thrust::for_each(zibit,zieit,VecCUDAPlusEquals()); 35967e8381f9SStefano Zampini } 35977e8381f9SStefano Zampini } else { 3598e61fc153SStefano Zampini if (cusp->cooPerm_a) { /* repeated entries in COO, with INSERT_VALUES -> reduce */ 359908391a17SStefano Zampini auto vbit = thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()); 3600e61fc153SStefano Zampini thrust::reduce_by_key(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),vbit,thrust::make_discard_iterator(),matrix->values->begin(),thrust::equal_to<PetscInt>(),thrust::plus<PetscScalar>()); 36017e8381f9SStefano Zampini } else { 360208391a17SStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->begin()), 36037e8381f9SStefano Zampini matrix->values->begin())); 360408391a17SStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(d_v,cusp->cooPerm->end()), 36057e8381f9SStefano Zampini matrix->values->end())); 36067e8381f9SStefano Zampini thrust::for_each(zibit,zieit,VecCUDAEquals()); 36077e8381f9SStefano Zampini } 36087e8381f9SStefano Zampini } 36097e8381f9SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 3610bfcc3627SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 3611e61fc153SStefano Zampini finalize: 3612e61fc153SStefano Zampini delete cooPerm_v; 36137e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 3614e61fc153SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 3615fcdce8c4SStefano Zampini /* shorter version of MatAssemblyEnd_SeqAIJ */ 3616fcdce8c4SStefano Zampini ierr = PetscInfo3(A,"Matrix size: %D X %D; storage space: 0 unneeded,%D used\n",A->rmap->n,A->cmap->n,a->nz);CHKERRQ(ierr); 3617fcdce8c4SStefano Zampini ierr = PetscInfo(A,"Number of mallocs during MatSetValues() is 0\n");CHKERRQ(ierr); 3618fcdce8c4SStefano Zampini ierr = PetscInfo1(A,"Maximum nonzeros in any row is %D\n",a->rmax);CHKERRQ(ierr); 3619fcdce8c4SStefano Zampini a->reallocs = 0; 3620fcdce8c4SStefano Zampini A->info.mallocs += 0; 3621fcdce8c4SStefano Zampini A->info.nz_unneeded = 0; 3622fcdce8c4SStefano Zampini A->assembled = A->was_assembled = PETSC_TRUE; 3623fcdce8c4SStefano Zampini A->num_ass++; 36247e8381f9SStefano Zampini PetscFunctionReturn(0); 36257e8381f9SStefano Zampini } 36267e8381f9SStefano Zampini 3627*a49f1ed0SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEInvalidateTranspose(Mat A, PetscBool destroy) 3628*a49f1ed0SStefano Zampini { 3629*a49f1ed0SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3630*a49f1ed0SStefano Zampini PetscErrorCode ierr; 3631*a49f1ed0SStefano Zampini 3632*a49f1ed0SStefano Zampini PetscFunctionBegin; 3633*a49f1ed0SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3634*a49f1ed0SStefano Zampini if (!cusp) PetscFunctionReturn(0); 3635*a49f1ed0SStefano Zampini if (destroy) { 3636*a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEMultStruct_Destroy(&cusp->matTranspose,cusp->format);CHKERRQ(ierr); 3637*a49f1ed0SStefano Zampini delete cusp->csr2csc_i; 3638*a49f1ed0SStefano Zampini cusp->csr2csc_i = NULL; 3639*a49f1ed0SStefano Zampini } 3640*a49f1ed0SStefano Zampini cusp->transupdated = PETSC_FALSE; 3641*a49f1ed0SStefano Zampini PetscFunctionReturn(0); 3642*a49f1ed0SStefano Zampini } 3643*a49f1ed0SStefano Zampini 36447e8381f9SStefano Zampini #include <thrust/binary_search.h> 3645e61fc153SStefano Zampini PetscErrorCode MatSetPreallocationCOO_SeqAIJCUSPARSE(Mat A, PetscInt n, const PetscInt coo_i[], const PetscInt coo_j[]) 36467e8381f9SStefano Zampini { 36477e8381f9SStefano Zampini PetscErrorCode ierr; 36487e8381f9SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 36497e8381f9SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 36507e8381f9SStefano Zampini PetscInt cooPerm_n, nzr = 0; 36517e8381f9SStefano Zampini cudaError_t cerr; 36527e8381f9SStefano Zampini 36537e8381f9SStefano Zampini PetscFunctionBegin; 36547e8381f9SStefano Zampini ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr); 36557e8381f9SStefano Zampini ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr); 36567e8381f9SStefano Zampini cooPerm_n = cusp->cooPerm ? cusp->cooPerm->size() : 0; 36577e8381f9SStefano Zampini if (n != cooPerm_n) { 36587e8381f9SStefano Zampini delete cusp->cooPerm; 36597e8381f9SStefano Zampini delete cusp->cooPerm_a; 36607e8381f9SStefano Zampini cusp->cooPerm = NULL; 36617e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 36627e8381f9SStefano Zampini } 36637e8381f9SStefano Zampini if (n) { 36647e8381f9SStefano Zampini THRUSTINTARRAY d_i(n); 36657e8381f9SStefano Zampini THRUSTINTARRAY d_j(n); 36667e8381f9SStefano Zampini THRUSTINTARRAY ii(A->rmap->n); 36677e8381f9SStefano Zampini 36687e8381f9SStefano Zampini if (!cusp->cooPerm) { cusp->cooPerm = new THRUSTINTARRAY(n); } 36697e8381f9SStefano Zampini if (!cusp->cooPerm_a) { cusp->cooPerm_a = new THRUSTINTARRAY(n); } 36707e8381f9SStefano Zampini 36717e8381f9SStefano Zampini ierr = PetscLogCpuToGpu(2.*n*sizeof(PetscInt));CHKERRQ(ierr); 36727e8381f9SStefano Zampini d_i.assign(coo_i,coo_i+n); 36737e8381f9SStefano Zampini d_j.assign(coo_j,coo_j+n); 36747e8381f9SStefano Zampini auto fkey = thrust::make_zip_iterator(thrust::make_tuple(d_i.begin(),d_j.begin())); 36757e8381f9SStefano Zampini auto ekey = thrust::make_zip_iterator(thrust::make_tuple(d_i.end(),d_j.end())); 36767e8381f9SStefano Zampini 367708391a17SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 36787e8381f9SStefano Zampini thrust::sequence(thrust::device, cusp->cooPerm->begin(), cusp->cooPerm->end(), 0); 36797e8381f9SStefano Zampini thrust::sort_by_key(fkey, ekey, cusp->cooPerm->begin(), IJCompare()); 36807e8381f9SStefano Zampini *cusp->cooPerm_a = d_i; 36817e8381f9SStefano Zampini THRUSTINTARRAY w = d_j; 36827e8381f9SStefano Zampini 36837e8381f9SStefano Zampini auto nekey = thrust::unique(fkey, ekey, IJEqual()); 36847e8381f9SStefano Zampini if (nekey == ekey) { /* all entries are unique */ 36857e8381f9SStefano Zampini delete cusp->cooPerm_a; 36867e8381f9SStefano Zampini cusp->cooPerm_a = NULL; 36877e8381f9SStefano Zampini } else { /* I couldn't come up with a more elegant algorithm */ 36887e8381f9SStefano Zampini adjacent_difference(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),cusp->cooPerm_a->begin(),IJDiff()); 36897e8381f9SStefano Zampini adjacent_difference(w.begin(),w.end(),w.begin(),IJDiff()); 36907e8381f9SStefano Zampini (*cusp->cooPerm_a)[0] = 0; 36917e8381f9SStefano Zampini w[0] = 0; 36927e8381f9SStefano Zampini thrust::transform(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),w.begin(),cusp->cooPerm_a->begin(),IJSum()); 36937e8381f9SStefano Zampini thrust::inclusive_scan(cusp->cooPerm_a->begin(),cusp->cooPerm_a->end(),cusp->cooPerm_a->begin(),thrust::plus<PetscInt>()); 36947e8381f9SStefano Zampini } 36957e8381f9SStefano Zampini thrust::counting_iterator<PetscInt> search_begin(0); 36967e8381f9SStefano Zampini thrust::upper_bound(d_i.begin(), nekey.get_iterator_tuple().get<0>(), 36977e8381f9SStefano Zampini search_begin, search_begin + A->rmap->n, 36987e8381f9SStefano Zampini ii.begin()); 369908391a17SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 370008391a17SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 37017e8381f9SStefano Zampini 37027e8381f9SStefano Zampini ierr = MatSeqXAIJFreeAIJ(A,&a->a,&a->j,&a->i);CHKERRQ(ierr); 37037e8381f9SStefano Zampini a->singlemalloc = PETSC_FALSE; 37047e8381f9SStefano Zampini a->free_a = PETSC_TRUE; 37057e8381f9SStefano Zampini a->free_ij = PETSC_TRUE; 37067e8381f9SStefano Zampini ierr = PetscMalloc1(A->rmap->n+1,&a->i);CHKERRQ(ierr); 37077e8381f9SStefano Zampini a->i[0] = 0; 37087e8381f9SStefano Zampini cerr = cudaMemcpy(a->i+1,ii.data().get(),A->rmap->n*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 37097e8381f9SStefano Zampini a->nz = a->maxnz = a->i[A->rmap->n]; 3710fcdce8c4SStefano Zampini a->rmax = 0; 37117e8381f9SStefano Zampini ierr = PetscMalloc1(a->nz,&a->a);CHKERRQ(ierr); 37127e8381f9SStefano Zampini ierr = PetscMalloc1(a->nz,&a->j);CHKERRQ(ierr); 37137e8381f9SStefano Zampini cerr = cudaMemcpy(a->j,d_j.data().get(),a->nz*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 37147e8381f9SStefano Zampini if (!a->ilen) { ierr = PetscMalloc1(A->rmap->n,&a->ilen);CHKERRQ(ierr); } 37157e8381f9SStefano Zampini if (!a->imax) { ierr = PetscMalloc1(A->rmap->n,&a->imax);CHKERRQ(ierr); } 37167e8381f9SStefano Zampini for (PetscInt i = 0; i < A->rmap->n; i++) { 37177e8381f9SStefano Zampini const PetscInt nnzr = a->i[i+1] - a->i[i]; 37187e8381f9SStefano Zampini nzr += (PetscInt)!!(nnzr); 37197e8381f9SStefano Zampini a->ilen[i] = a->imax[i] = nnzr; 3720fcdce8c4SStefano Zampini a->rmax = PetscMax(a->rmax,nnzr); 37217e8381f9SStefano Zampini } 3722fcdce8c4SStefano Zampini a->nonzerorowcnt = nzr; 37237e8381f9SStefano Zampini A->preallocated = PETSC_TRUE; 37247e8381f9SStefano Zampini ierr = PetscLogGpuToCpu((A->rmap->n+a->nz)*sizeof(PetscInt));CHKERRQ(ierr); 3725fcdce8c4SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(A);CHKERRQ(ierr); 37267e8381f9SStefano Zampini } else { 37277e8381f9SStefano Zampini ierr = MatSeqAIJSetPreallocation(A,0,NULL);CHKERRQ(ierr); 37287e8381f9SStefano Zampini } 3729e61fc153SStefano Zampini ierr = MatSetOption(A,MAT_NEW_NONZERO_ALLOCATION_ERR,PETSC_TRUE);CHKERRQ(ierr); 37307e8381f9SStefano Zampini 37317e8381f9SStefano Zampini /* We want to allocate the CUSPARSE struct for matvec now. 3732e61fc153SStefano Zampini The code is so convoluted now that I prefer to copy zeros */ 3733e61fc153SStefano Zampini ierr = PetscArrayzero(a->a,a->nz);CHKERRQ(ierr); 37347e8381f9SStefano Zampini ierr = MatCheckCompressedRow(A,nzr,&a->compressedrow,a->i,A->rmap->n,0.6);CHKERRQ(ierr); 37357e8381f9SStefano Zampini A->offloadmask = PETSC_OFFLOAD_CPU; 37367e8381f9SStefano Zampini A->nonzerostate++; 37377e8381f9SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 3738*a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_TRUE);CHKERRQ(ierr); 37397e8381f9SStefano Zampini 37407e8381f9SStefano Zampini A->assembled = PETSC_FALSE; 37417e8381f9SStefano Zampini A->was_assembled = PETSC_FALSE; 37427e8381f9SStefano Zampini PetscFunctionReturn(0); 37437e8381f9SStefano Zampini } 3744ed502f03SStefano Zampini 3745ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArrayRead(Mat A, const PetscScalar** a) 3746ed502f03SStefano Zampini { 3747ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3748ed502f03SStefano Zampini CsrMatrix *csr; 3749ed502f03SStefano Zampini PetscErrorCode ierr; 3750ed502f03SStefano Zampini 3751ed502f03SStefano Zampini PetscFunctionBegin; 3752ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3753ed502f03SStefano Zampini PetscValidPointer(a,2); 3754ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3755ed502f03SStefano Zampini if (cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 3756ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 375733c9ba73SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3758ed502f03SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 3759ed502f03SStefano Zampini if (!csr->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3760ed502f03SStefano Zampini *a = csr->values->data().get(); 3761ed502f03SStefano Zampini PetscFunctionReturn(0); 3762ed502f03SStefano Zampini } 3763ed502f03SStefano Zampini 3764ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArrayRead(Mat A, const PetscScalar** a) 3765ed502f03SStefano Zampini { 3766ed502f03SStefano Zampini PetscFunctionBegin; 3767ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3768ed502f03SStefano Zampini PetscValidPointer(a,2); 3769ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3770ed502f03SStefano Zampini *a = NULL; 3771ed502f03SStefano Zampini PetscFunctionReturn(0); 3772ed502f03SStefano Zampini } 3773ed502f03SStefano Zampini 3774039c6fbaSStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArray(Mat A, PetscScalar** a) 3775039c6fbaSStefano Zampini { 3776039c6fbaSStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3777039c6fbaSStefano Zampini CsrMatrix *csr; 3778039c6fbaSStefano Zampini PetscErrorCode ierr; 3779039c6fbaSStefano Zampini 3780039c6fbaSStefano Zampini PetscFunctionBegin; 3781039c6fbaSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3782039c6fbaSStefano Zampini PetscValidPointer(a,2); 3783039c6fbaSStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3784039c6fbaSStefano Zampini if (cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 3785039c6fbaSStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 378633c9ba73SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3787039c6fbaSStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 3788039c6fbaSStefano Zampini if (!csr->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3789039c6fbaSStefano Zampini *a = csr->values->data().get(); 3790039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 3791*a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 3792039c6fbaSStefano Zampini PetscFunctionReturn(0); 3793039c6fbaSStefano Zampini } 3794039c6fbaSStefano Zampini 3795039c6fbaSStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArray(Mat A, PetscScalar** a) 3796039c6fbaSStefano Zampini { 3797039c6fbaSStefano Zampini PetscErrorCode ierr; 3798039c6fbaSStefano Zampini 3799039c6fbaSStefano Zampini PetscFunctionBegin; 3800039c6fbaSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3801039c6fbaSStefano Zampini PetscValidPointer(a,2); 3802039c6fbaSStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3803039c6fbaSStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 3804039c6fbaSStefano Zampini *a = NULL; 3805039c6fbaSStefano Zampini PetscFunctionReturn(0); 3806039c6fbaSStefano Zampini } 3807039c6fbaSStefano Zampini 3808ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEGetArrayWrite(Mat A, PetscScalar** a) 3809ed502f03SStefano Zampini { 3810ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *cusp = (Mat_SeqAIJCUSPARSE*)A->spptr; 3811ed502f03SStefano Zampini CsrMatrix *csr; 3812*a49f1ed0SStefano Zampini PetscErrorCode ierr; 3813ed502f03SStefano Zampini 3814ed502f03SStefano Zampini PetscFunctionBegin; 3815ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3816ed502f03SStefano Zampini PetscValidPointer(a,2); 3817ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3818ed502f03SStefano Zampini if (cusp->format == MAT_CUSPARSE_ELL || cusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 381933c9ba73SStefano Zampini if (!cusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3820ed502f03SStefano Zampini csr = (CsrMatrix*)cusp->mat->mat; 3821ed502f03SStefano Zampini if (!csr->values) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing CUDA memory"); 3822ed502f03SStefano Zampini *a = csr->values->data().get(); 3823039c6fbaSStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 3824*a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(A,PETSC_FALSE);CHKERRQ(ierr); 3825ed502f03SStefano Zampini PetscFunctionReturn(0); 3826ed502f03SStefano Zampini } 3827ed502f03SStefano Zampini 3828ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSERestoreArrayWrite(Mat A, PetscScalar** a) 3829ed502f03SStefano Zampini { 3830ed502f03SStefano Zampini PetscErrorCode ierr; 3831ed502f03SStefano Zampini 3832ed502f03SStefano Zampini PetscFunctionBegin; 3833ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3834ed502f03SStefano Zampini PetscValidPointer(a,2); 3835ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3836ed502f03SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr); 3837ed502f03SStefano Zampini *a = NULL; 3838ed502f03SStefano Zampini PetscFunctionReturn(0); 3839ed502f03SStefano Zampini } 3840ed502f03SStefano Zampini 3841ed502f03SStefano Zampini struct IJCompare4 3842ed502f03SStefano Zampini { 3843ed502f03SStefano Zampini __host__ __device__ 38442ed87e7eSStefano Zampini inline bool operator() (const thrust::tuple<int, int, PetscScalar, int> &t1, const thrust::tuple<int, int, PetscScalar, int> &t2) 3845ed502f03SStefano Zampini { 3846ed502f03SStefano Zampini if (t1.get<0>() < t2.get<0>()) return true; 3847ed502f03SStefano Zampini if (t1.get<0>() == t2.get<0>()) return t1.get<1>() < t2.get<1>(); 3848ed502f03SStefano Zampini return false; 3849ed502f03SStefano Zampini } 3850ed502f03SStefano Zampini }; 3851ed502f03SStefano Zampini 38528909a122SStefano Zampini struct Shift 38538909a122SStefano Zampini { 3854ed502f03SStefano Zampini int _shift; 3855ed502f03SStefano Zampini 3856ed502f03SStefano Zampini Shift(int shift) : _shift(shift) {} 3857ed502f03SStefano Zampini __host__ __device__ 3858ed502f03SStefano Zampini inline int operator() (const int &c) 3859ed502f03SStefano Zampini { 3860ed502f03SStefano Zampini return c + _shift; 3861ed502f03SStefano Zampini } 3862ed502f03SStefano Zampini }; 3863ed502f03SStefano Zampini 3864ed502f03SStefano Zampini /* merges to SeqAIJCUSPARSE matrices, [A';B']' operation in matlab notation */ 3865ed502f03SStefano Zampini PetscErrorCode MatSeqAIJCUSPARSEMergeMats(Mat A,Mat B,MatReuse reuse,Mat* C) 3866ed502f03SStefano Zampini { 3867ed502f03SStefano Zampini PetscErrorCode ierr; 3868ed502f03SStefano Zampini Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data, *b = (Mat_SeqAIJ*)B->data, *c; 3869ed502f03SStefano Zampini Mat_SeqAIJCUSPARSE *Acusp = (Mat_SeqAIJCUSPARSE*)A->spptr, *Bcusp = (Mat_SeqAIJCUSPARSE*)B->spptr, *Ccusp; 3870ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *Cmat; 3871ed502f03SStefano Zampini CsrMatrix *Acsr,*Bcsr,*Ccsr; 3872ed502f03SStefano Zampini PetscInt Annz,Bnnz; 3873ed502f03SStefano Zampini cusparseStatus_t stat; 3874ed502f03SStefano Zampini PetscInt i,m,n,zero = 0; 3875ed502f03SStefano Zampini cudaError_t cerr; 3876ed502f03SStefano Zampini 3877ed502f03SStefano Zampini PetscFunctionBegin; 3878ed502f03SStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 3879ed502f03SStefano Zampini PetscValidHeaderSpecific(B,MAT_CLASSID,2); 3880ed502f03SStefano Zampini PetscValidPointer(C,4); 3881ed502f03SStefano Zampini PetscCheckTypeName(A,MATSEQAIJCUSPARSE); 3882ed502f03SStefano Zampini PetscCheckTypeName(B,MATSEQAIJCUSPARSE); 3883ed502f03SStefano Zampini if (A->rmap->n != B->rmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %D != %D",A->rmap->n,B->rmap->n); 3884ed502f03SStefano Zampini if (reuse == MAT_INPLACE_MATRIX) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"MAT_INPLACE_MATRIX not supported"); 3885ed502f03SStefano Zampini if (Acusp->format == MAT_CUSPARSE_ELL || Acusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 3886ed502f03SStefano Zampini if (Bcusp->format == MAT_CUSPARSE_ELL || Bcusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 3887ed502f03SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 3888ed502f03SStefano Zampini m = A->rmap->n; 3889ed502f03SStefano Zampini n = A->cmap->n + B->cmap->n; 3890ed502f03SStefano Zampini ierr = MatCreate(PETSC_COMM_SELF,C);CHKERRQ(ierr); 3891ed502f03SStefano Zampini ierr = MatSetSizes(*C,m,n,m,n);CHKERRQ(ierr); 3892ed502f03SStefano Zampini ierr = MatSetType(*C,MATSEQAIJCUSPARSE);CHKERRQ(ierr); 3893ed502f03SStefano Zampini c = (Mat_SeqAIJ*)(*C)->data; 3894ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)(*C)->spptr; 3895ed502f03SStefano Zampini Cmat = new Mat_SeqAIJCUSPARSEMultStruct; 3896ed502f03SStefano Zampini Ccsr = new CsrMatrix; 3897ed502f03SStefano Zampini Cmat->cprowIndices = NULL; 3898ed502f03SStefano Zampini c->compressedrow.use = PETSC_FALSE; 3899ed502f03SStefano Zampini c->compressedrow.nrows = 0; 3900ed502f03SStefano Zampini c->compressedrow.i = NULL; 3901ed502f03SStefano Zampini c->compressedrow.rindex = NULL; 3902ed502f03SStefano Zampini Ccusp->workVector = NULL; 3903ed502f03SStefano Zampini Ccusp->nrows = m; 3904ed502f03SStefano Zampini Ccusp->mat = Cmat; 3905ed502f03SStefano Zampini Ccusp->mat->mat = Ccsr; 3906ed502f03SStefano Zampini Ccsr->num_rows = m; 3907ed502f03SStefano Zampini Ccsr->num_cols = n; 3908ed502f03SStefano Zampini stat = cusparseCreateMatDescr(&Cmat->descr);CHKERRCUSPARSE(stat); 3909ed502f03SStefano Zampini stat = cusparseSetMatIndexBase(Cmat->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 3910ed502f03SStefano Zampini stat = cusparseSetMatType(Cmat->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 3911ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 3912ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 3913ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(Cmat->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 3914ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 3915ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 3916ed502f03SStefano Zampini cerr = cudaMemcpy(Cmat->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 3917ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 3918ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 3919ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSEGenerateTransposeForMult(A);CHKERRQ(ierr); 3920ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSEGenerateTransposeForMult(B);CHKERRQ(ierr); 3921ed502f03SStefano Zampini if (!Acusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3922ed502f03SStefano Zampini if (!Bcusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 3923ed502f03SStefano Zampini 3924ed502f03SStefano Zampini Acsr = (CsrMatrix*)Acusp->mat->mat; 3925ed502f03SStefano Zampini Bcsr = (CsrMatrix*)Bcusp->mat->mat; 3926ed502f03SStefano Zampini Annz = (PetscInt)Acsr->column_indices->size(); 3927ed502f03SStefano Zampini Bnnz = (PetscInt)Bcsr->column_indices->size(); 3928ed502f03SStefano Zampini c->nz = Annz + Bnnz; 3929ed502f03SStefano Zampini Ccsr->row_offsets = new THRUSTINTARRAY32(m+1); 3930ed502f03SStefano Zampini Ccsr->column_indices = new THRUSTINTARRAY32(c->nz); 3931ed502f03SStefano Zampini Ccsr->values = new THRUSTARRAY(c->nz); 3932ed502f03SStefano Zampini Ccsr->num_entries = c->nz; 3933ed502f03SStefano Zampini Ccusp->cooPerm = new THRUSTINTARRAY(c->nz); 3934ed502f03SStefano Zampini if (c->nz) { 39352ed87e7eSStefano Zampini auto Acoo = new THRUSTINTARRAY32(Annz); 39362ed87e7eSStefano Zampini auto Bcoo = new THRUSTINTARRAY32(Bnnz); 39372ed87e7eSStefano Zampini auto Ccoo = new THRUSTINTARRAY32(c->nz); 39382ed87e7eSStefano Zampini THRUSTINTARRAY32 *Aroff,*Broff; 39392ed87e7eSStefano Zampini 3940ed502f03SStefano Zampini if (a->compressedrow.use) { /* need full row offset */ 3941ed502f03SStefano Zampini if (!Acusp->rowoffsets_gpu) { 3942ed502f03SStefano Zampini Acusp->rowoffsets_gpu = new THRUSTINTARRAY32(A->rmap->n + 1); 3943ed502f03SStefano Zampini Acusp->rowoffsets_gpu->assign(a->i,a->i + A->rmap->n + 1); 3944ed502f03SStefano Zampini ierr = PetscLogCpuToGpu((A->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 3945ed502f03SStefano Zampini } 39462ed87e7eSStefano Zampini Aroff = Acusp->rowoffsets_gpu; 39472ed87e7eSStefano Zampini } else Aroff = Acsr->row_offsets; 3948ed502f03SStefano Zampini if (b->compressedrow.use) { /* need full row offset */ 3949ed502f03SStefano Zampini if (!Bcusp->rowoffsets_gpu) { 3950ed502f03SStefano Zampini Bcusp->rowoffsets_gpu = new THRUSTINTARRAY32(B->rmap->n + 1); 3951ed502f03SStefano Zampini Bcusp->rowoffsets_gpu->assign(b->i,b->i + B->rmap->n + 1); 3952ed502f03SStefano Zampini ierr = PetscLogCpuToGpu((B->rmap->n + 1)*sizeof(PetscInt));CHKERRQ(ierr); 3953ed502f03SStefano Zampini } 39542ed87e7eSStefano Zampini Broff = Bcusp->rowoffsets_gpu; 39552ed87e7eSStefano Zampini } else Broff = Bcsr->row_offsets; 3956ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 39572ed87e7eSStefano Zampini stat = cusparseXcsr2coo(Acusp->handle, 39582ed87e7eSStefano Zampini Aroff->data().get(), 39592ed87e7eSStefano Zampini Annz, 39602ed87e7eSStefano Zampini m, 39612ed87e7eSStefano Zampini Acoo->data().get(), 39622ed87e7eSStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 3963ed502f03SStefano Zampini stat = cusparseXcsr2coo(Bcusp->handle, 39642ed87e7eSStefano Zampini Broff->data().get(), 3965ed502f03SStefano Zampini Bnnz, 3966ed502f03SStefano Zampini m, 39672ed87e7eSStefano Zampini Bcoo->data().get(), 3968ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 39692ed87e7eSStefano Zampini /* Issues when using bool with large matrices on SUMMIT 10.2.89 */ 39702ed87e7eSStefano Zampini auto Aperm = thrust::make_constant_iterator(1); 39712ed87e7eSStefano Zampini auto Bperm = thrust::make_constant_iterator(0); 39728909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(10,0,0) 3973ed502f03SStefano Zampini auto Bcib = thrust::make_transform_iterator(Bcsr->column_indices->begin(),Shift(A->cmap->n)); 3974ed502f03SStefano Zampini auto Bcie = thrust::make_transform_iterator(Bcsr->column_indices->end(),Shift(A->cmap->n)); 39758909a122SStefano Zampini #else 39768909a122SStefano Zampini /* there are issues instantiating the merge operation using a transform iterator for the columns of B */ 39778909a122SStefano Zampini auto Bcib = Bcsr->column_indices->begin(); 39788909a122SStefano Zampini auto Bcie = Bcsr->column_indices->end(); 39798909a122SStefano Zampini thrust::transform(Bcib,Bcie,Bcib,Shift(A->cmap->n)); 39808909a122SStefano Zampini #endif 39812ed87e7eSStefano Zampini auto wPerm = new THRUSTINTARRAY32(Annz+Bnnz); 39822ed87e7eSStefano Zampini auto Azb = thrust::make_zip_iterator(thrust::make_tuple(Acoo->begin(),Acsr->column_indices->begin(),Acsr->values->begin(),Aperm)); 39832ed87e7eSStefano Zampini auto Aze = thrust::make_zip_iterator(thrust::make_tuple(Acoo->end(),Acsr->column_indices->end(),Acsr->values->end(),Aperm)); 39842ed87e7eSStefano Zampini auto Bzb = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->begin(),Bcib,Bcsr->values->begin(),Bperm)); 39852ed87e7eSStefano Zampini auto Bze = thrust::make_zip_iterator(thrust::make_tuple(Bcoo->end(),Bcie,Bcsr->values->end(),Bperm)); 39862ed87e7eSStefano Zampini auto Czb = thrust::make_zip_iterator(thrust::make_tuple(Ccoo->begin(),Ccsr->column_indices->begin(),Ccsr->values->begin(),wPerm->begin())); 3987ed502f03SStefano Zampini auto p1 = Ccusp->cooPerm->begin(); 3988ed502f03SStefano Zampini auto p2 = Ccusp->cooPerm->begin(); 3989ed502f03SStefano Zampini thrust::advance(p2,Annz); 39902ed87e7eSStefano Zampini PetscStackCallThrust(thrust::merge(thrust::device,Azb,Aze,Bzb,Bze,Czb,IJCompare4())); 39918909a122SStefano Zampini #if PETSC_PKG_CUDA_VERSION_LT(10,0,0) 39928909a122SStefano Zampini thrust::transform(Bcib,Bcie,Bcib,Shift(-A->cmap->n)); 39938909a122SStefano Zampini #endif 39942ed87e7eSStefano Zampini auto cci = thrust::make_counting_iterator(zero); 39952ed87e7eSStefano Zampini auto cce = thrust::make_counting_iterator(c->nz); 39962ed87e7eSStefano Zampini #if 0 //Errors on SUMMIT cuda 11.1.0 39972ed87e7eSStefano Zampini PetscStackCallThrust(thrust::partition_copy(thrust::device,cci,cce,wPerm->begin(),p1,p2,thrust::identity<int>())); 39982ed87e7eSStefano Zampini #else 39992ed87e7eSStefano Zampini auto pred = thrust::identity<int>(); 40002ed87e7eSStefano Zampini PetscStackCallThrust(thrust::copy_if(thrust::device,cci,cce,wPerm->begin(),p1,pred)); 40012ed87e7eSStefano Zampini PetscStackCallThrust(thrust::remove_copy_if(thrust::device,cci,cce,wPerm->begin(),p2,pred)); 40022ed87e7eSStefano Zampini #endif 4003ed502f03SStefano Zampini stat = cusparseXcoo2csr(Ccusp->handle, 40042ed87e7eSStefano Zampini Ccoo->data().get(), 4005ed502f03SStefano Zampini c->nz, 4006ed502f03SStefano Zampini m, 4007ed502f03SStefano Zampini Ccsr->row_offsets->data().get(), 4008ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4009ed502f03SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 4010ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 40112ed87e7eSStefano Zampini delete wPerm; 40122ed87e7eSStefano Zampini delete Acoo; 40132ed87e7eSStefano Zampini delete Bcoo; 40142ed87e7eSStefano Zampini delete Ccoo; 4015ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4016ed502f03SStefano Zampini stat = cusparseCreateCsr(&Cmat->matDescr, Ccsr->num_rows, Ccsr->num_cols, Ccsr->num_entries, 4017ed502f03SStefano Zampini Ccsr->row_offsets->data().get(), Ccsr->column_indices->data().get(), Ccsr->values->data().get(), 4018ed502f03SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 4019ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 4020ed502f03SStefano Zampini #endif 4021ed502f03SStefano Zampini if (Acusp->transgen && Bcusp->transgen) { /* if A and B have the transpose, generate C transpose too */ 4022ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 4023ed502f03SStefano Zampini Mat_SeqAIJCUSPARSEMultStruct *CmatT = new Mat_SeqAIJCUSPARSEMultStruct; 4024ed502f03SStefano Zampini CsrMatrix *CcsrT = new CsrMatrix; 4025ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix*)Acusp->matTranspose->mat : NULL; 4026ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix*)Bcusp->matTranspose->mat : NULL; 4027ed502f03SStefano Zampini 4028ed502f03SStefano Zampini Ccusp->transgen = PETSC_TRUE; 4029*a49f1ed0SStefano Zampini Ccusp->transupdated = PETSC_TRUE; 4030*a49f1ed0SStefano Zampini Ccusp->rowoffsets_gpu = NULL; 4031ed502f03SStefano Zampini CmatT->cprowIndices = NULL; 4032ed502f03SStefano Zampini CmatT->mat = CcsrT; 4033ed502f03SStefano Zampini CcsrT->num_rows = n; 4034ed502f03SStefano Zampini CcsrT->num_cols = m; 4035ed502f03SStefano Zampini CcsrT->num_entries = c->nz; 4036ed502f03SStefano Zampini 4037ed502f03SStefano Zampini CcsrT->row_offsets = new THRUSTINTARRAY32(n+1); 4038ed502f03SStefano Zampini CcsrT->column_indices = new THRUSTINTARRAY32(c->nz); 4039ed502f03SStefano Zampini CcsrT->values = new THRUSTARRAY(c->nz); 4040ed502f03SStefano Zampini 4041ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 4042ed502f03SStefano Zampini auto rT = CcsrT->row_offsets->begin(); 4043ed502f03SStefano Zampini if (AT) { 4044ed502f03SStefano Zampini rT = thrust::copy(AcsrT->row_offsets->begin(),AcsrT->row_offsets->end(),rT); 4045ed502f03SStefano Zampini thrust::advance(rT,-1); 4046ed502f03SStefano Zampini } 4047ed502f03SStefano Zampini if (BT) { 4048ed502f03SStefano Zampini auto titb = thrust::make_transform_iterator(BcsrT->row_offsets->begin(),Shift(a->nz)); 4049ed502f03SStefano Zampini auto tite = thrust::make_transform_iterator(BcsrT->row_offsets->end(),Shift(a->nz)); 4050ed502f03SStefano Zampini thrust::copy(titb,tite,rT); 4051ed502f03SStefano Zampini } 4052ed502f03SStefano Zampini auto cT = CcsrT->column_indices->begin(); 4053ed502f03SStefano Zampini if (AT) cT = thrust::copy(AcsrT->column_indices->begin(),AcsrT->column_indices->end(),cT); 4054ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->column_indices->begin(),BcsrT->column_indices->end(),cT); 4055ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 4056ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(),AcsrT->values->end(),vT); 4057ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(),BcsrT->values->end(),vT); 4058ed502f03SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 4059ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 4060ed502f03SStefano Zampini 4061ed502f03SStefano Zampini stat = cusparseCreateMatDescr(&CmatT->descr);CHKERRCUSPARSE(stat); 4062ed502f03SStefano Zampini stat = cusparseSetMatIndexBase(CmatT->descr, CUSPARSE_INDEX_BASE_ZERO);CHKERRCUSPARSE(stat); 4063ed502f03SStefano Zampini stat = cusparseSetMatType(CmatT->descr, CUSPARSE_MATRIX_TYPE_GENERAL);CHKERRCUSPARSE(stat); 4064ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->alpha_one),sizeof(PetscScalar));CHKERRCUDA(cerr); 4065ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->beta_zero),sizeof(PetscScalar));CHKERRCUDA(cerr); 4066ed502f03SStefano Zampini cerr = cudaMalloc((void **)&(CmatT->beta_one), sizeof(PetscScalar));CHKERRCUDA(cerr); 4067ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->alpha_one,&PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4068ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->beta_zero,&PETSC_CUSPARSE_ZERO,sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4069ed502f03SStefano Zampini cerr = cudaMemcpy(CmatT->beta_one, &PETSC_CUSPARSE_ONE, sizeof(PetscScalar),cudaMemcpyHostToDevice);CHKERRCUDA(cerr); 4070ed502f03SStefano Zampini #if PETSC_PKG_CUDA_VERSION_GE(11,0,0) 4071ed502f03SStefano Zampini stat = cusparseCreateCsr(&CmatT->matDescr, CcsrT->num_rows, CcsrT->num_cols, CcsrT->num_entries, 4072ed502f03SStefano Zampini CcsrT->row_offsets->data().get(), CcsrT->column_indices->data().get(), CcsrT->values->data().get(), 4073ed502f03SStefano Zampini CUSPARSE_INDEX_32I, CUSPARSE_INDEX_32I, 4074ed502f03SStefano Zampini CUSPARSE_INDEX_BASE_ZERO, cusparse_scalartype);CHKERRCUSPARSE(stat); 4075ed502f03SStefano Zampini #endif 4076ed502f03SStefano Zampini Ccusp->matTranspose = CmatT; 4077ed502f03SStefano Zampini } 4078ed502f03SStefano Zampini } 4079ed502f03SStefano Zampini 4080ed502f03SStefano Zampini c->singlemalloc = PETSC_FALSE; 4081ed502f03SStefano Zampini c->free_a = PETSC_TRUE; 4082ed502f03SStefano Zampini c->free_ij = PETSC_TRUE; 4083ed502f03SStefano Zampini ierr = PetscMalloc1(m+1,&c->i);CHKERRQ(ierr); 4084ed502f03SStefano Zampini ierr = PetscMalloc1(c->nz,&c->j);CHKERRQ(ierr); 4085ed502f03SStefano Zampini if (PetscDefined(USE_64BIT_INDICES)) { /* 32 to 64 bit conversion on the GPU and then copy to host (lazy) */ 4086ed502f03SStefano Zampini THRUSTINTARRAY ii(Ccsr->row_offsets->size()); 4087ed502f03SStefano Zampini THRUSTINTARRAY jj(Ccsr->column_indices->size()); 4088ed502f03SStefano Zampini ii = *Ccsr->row_offsets; 4089ed502f03SStefano Zampini jj = *Ccsr->column_indices; 4090ed502f03SStefano Zampini cerr = cudaMemcpy(c->i,ii.data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4091ed502f03SStefano Zampini cerr = cudaMemcpy(c->j,jj.data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4092ed502f03SStefano Zampini } else { 4093ed502f03SStefano Zampini cerr = cudaMemcpy(c->i,Ccsr->row_offsets->data().get(),Ccsr->row_offsets->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4094ed502f03SStefano Zampini cerr = cudaMemcpy(c->j,Ccsr->column_indices->data().get(),Ccsr->column_indices->size()*sizeof(PetscInt),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4095ed502f03SStefano Zampini } 4096ed502f03SStefano Zampini ierr = PetscLogGpuToCpu((Ccsr->column_indices->size() + Ccsr->row_offsets->size())*sizeof(PetscInt));CHKERRQ(ierr); 4097ed502f03SStefano Zampini ierr = PetscMalloc1(m,&c->ilen);CHKERRQ(ierr); 4098ed502f03SStefano Zampini ierr = PetscMalloc1(m,&c->imax);CHKERRQ(ierr); 4099ed502f03SStefano Zampini c->maxnz = c->nz; 4100ed502f03SStefano Zampini c->nonzerorowcnt = 0; 4101ed502f03SStefano Zampini c->rmax = 0; 4102ed502f03SStefano Zampini for (i = 0; i < m; i++) { 4103ed502f03SStefano Zampini const PetscInt nn = c->i[i+1] - c->i[i]; 4104ed502f03SStefano Zampini c->ilen[i] = c->imax[i] = nn; 4105ed502f03SStefano Zampini c->nonzerorowcnt += (PetscInt)!!nn; 4106ed502f03SStefano Zampini c->rmax = PetscMax(c->rmax,nn); 4107ed502f03SStefano Zampini } 4108ed502f03SStefano Zampini ierr = MatMarkDiagonal_SeqAIJ(*C);CHKERRQ(ierr); 4109ed502f03SStefano Zampini ierr = PetscMalloc1(c->nz,&c->a);CHKERRQ(ierr); 4110ed502f03SStefano Zampini (*C)->nonzerostate++; 4111ed502f03SStefano Zampini ierr = PetscLayoutSetUp((*C)->rmap);CHKERRQ(ierr); 4112ed502f03SStefano Zampini ierr = PetscLayoutSetUp((*C)->cmap);CHKERRQ(ierr); 4113ed502f03SStefano Zampini Ccusp->nonzerostate = (*C)->nonzerostate; 4114ed502f03SStefano Zampini (*C)->preallocated = PETSC_TRUE; 4115ed502f03SStefano Zampini } else { 4116ed502f03SStefano Zampini if ((*C)->rmap->n != B->rmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Invalid number or rows %D != %D",(*C)->rmap->n,B->rmap->n); 4117ed502f03SStefano Zampini c = (Mat_SeqAIJ*)(*C)->data; 4118ed502f03SStefano Zampini if (c->nz) { 4119ed502f03SStefano Zampini Ccusp = (Mat_SeqAIJCUSPARSE*)(*C)->spptr; 4120ed502f03SStefano Zampini if (!Ccusp->cooPerm) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing cooPerm"); 4121ed502f03SStefano Zampini if (Ccusp->format == MAT_CUSPARSE_ELL || Ccusp->format == MAT_CUSPARSE_HYB) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not implemented"); 4122ed502f03SStefano Zampini if (Ccusp->nonzerostate != (*C)->nonzerostate) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Wrong nonzerostate"); 4123ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(A);CHKERRQ(ierr); 4124ed502f03SStefano Zampini ierr = MatSeqAIJCUSPARSECopyToGPU(B);CHKERRQ(ierr); 4125ed502f03SStefano Zampini if (!Acusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4126ed502f03SStefano Zampini if (!Bcusp->mat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing Mat_SeqAIJCUSPARSEMultStruct"); 4127ed502f03SStefano Zampini Acsr = (CsrMatrix*)Acusp->mat->mat; 4128ed502f03SStefano Zampini Bcsr = (CsrMatrix*)Bcusp->mat->mat; 4129ed502f03SStefano Zampini Ccsr = (CsrMatrix*)Ccusp->mat->mat; 4130ed502f03SStefano Zampini if (Acsr->num_entries != (PetscInt)Acsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"A nnz %D != %D",Acsr->num_entries,(PetscInt)Acsr->values->size()); 4131ed502f03SStefano Zampini if (Bcsr->num_entries != (PetscInt)Bcsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"B nnz %D != %D",Bcsr->num_entries,(PetscInt)Bcsr->values->size()); 4132ed502f03SStefano Zampini if (Ccsr->num_entries != (PetscInt)Ccsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"C nnz %D != %D",Ccsr->num_entries,(PetscInt)Ccsr->values->size()); 4133ed502f03SStefano Zampini if (Ccsr->num_entries != Acsr->num_entries + Bcsr->num_entries) SETERRQ3(PETSC_COMM_SELF,PETSC_ERR_COR,"C nnz %D != %D + %D",Ccsr->num_entries,Acsr->num_entries,Bcsr->num_entries); 4134ed502f03SStefano Zampini if (Ccusp->cooPerm->size() != Ccsr->values->size()) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_COR,"permSize %D != %D",(PetscInt)Ccusp->cooPerm->size(),(PetscInt)Ccsr->values->size()); 4135ed502f03SStefano Zampini auto pmid = Ccusp->cooPerm->begin(); 4136ed502f03SStefano Zampini thrust::advance(pmid,Acsr->num_entries); 4137ed502f03SStefano Zampini ierr = PetscLogGpuTimeBegin();CHKERRQ(ierr); 4138ed502f03SStefano Zampini auto zibait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->begin(), 4139ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),Ccusp->cooPerm->begin()))); 4140ed502f03SStefano Zampini auto zieait = thrust::make_zip_iterator(thrust::make_tuple(Acsr->values->end(), 4141ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),pmid))); 4142ed502f03SStefano Zampini thrust::for_each(zibait,zieait,VecCUDAEquals()); 4143ed502f03SStefano Zampini auto zibbit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->begin(), 4144ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),pmid))); 4145ed502f03SStefano Zampini auto ziebit = thrust::make_zip_iterator(thrust::make_tuple(Bcsr->values->end(), 4146ed502f03SStefano Zampini thrust::make_permutation_iterator(Ccsr->values->begin(),Ccusp->cooPerm->end()))); 4147ed502f03SStefano Zampini thrust::for_each(zibbit,ziebit,VecCUDAEquals()); 4148*a49f1ed0SStefano Zampini ierr = MatSeqAIJCUSPARSEInvalidateTranspose(*C,PETSC_FALSE);CHKERRQ(ierr); 4149ed502f03SStefano Zampini if (Acusp->transgen && Bcusp->transgen && Ccusp->transgen) { 4150ed502f03SStefano Zampini if (!Ccusp->matTranspose) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_COR,"Missing transpose Mat_SeqAIJCUSPARSEMultStruct"); 4151ed502f03SStefano Zampini PetscBool AT = Acusp->matTranspose ? PETSC_TRUE : PETSC_FALSE, BT = Bcusp->matTranspose ? PETSC_TRUE : PETSC_FALSE; 4152ed502f03SStefano Zampini CsrMatrix *AcsrT = AT ? (CsrMatrix*)Acusp->matTranspose->mat : NULL; 4153ed502f03SStefano Zampini CsrMatrix *BcsrT = BT ? (CsrMatrix*)Bcusp->matTranspose->mat : NULL; 4154ed502f03SStefano Zampini CsrMatrix *CcsrT = (CsrMatrix*)Ccusp->matTranspose->mat; 4155ed502f03SStefano Zampini auto vT = CcsrT->values->begin(); 4156ed502f03SStefano Zampini if (AT) vT = thrust::copy(AcsrT->values->begin(),AcsrT->values->end(),vT); 4157ed502f03SStefano Zampini if (BT) thrust::copy(BcsrT->values->begin(),BcsrT->values->end(),vT); 4158*a49f1ed0SStefano Zampini Ccusp->transupdated = PETSC_TRUE; 4159ed502f03SStefano Zampini } 4160ed502f03SStefano Zampini cerr = WaitForCUDA();CHKERRCUDA(cerr); 4161ed502f03SStefano Zampini ierr = PetscLogGpuTimeEnd();CHKERRQ(ierr); 4162ed502f03SStefano Zampini } 4163ed502f03SStefano Zampini } 4164ed502f03SStefano Zampini ierr = PetscObjectStateIncrease((PetscObject)*C);CHKERRQ(ierr); 4165ed502f03SStefano Zampini (*C)->assembled = PETSC_TRUE; 4166ed502f03SStefano Zampini (*C)->was_assembled = PETSC_FALSE; 4167ed502f03SStefano Zampini (*C)->offloadmask = PETSC_OFFLOAD_GPU; 4168ed502f03SStefano Zampini PetscFunctionReturn(0); 4169ed502f03SStefano Zampini } 4170c215019aSStefano Zampini 4171c215019aSStefano Zampini static PetscErrorCode MatSeqAIJCopySubArray_SeqAIJCUSPARSE(Mat A, PetscInt n, const PetscInt idx[], PetscScalar v[]) 4172c215019aSStefano Zampini { 4173c215019aSStefano Zampini PetscErrorCode ierr; 4174c215019aSStefano Zampini bool dmem; 4175c215019aSStefano Zampini const PetscScalar *av; 4176c215019aSStefano Zampini cudaError_t cerr; 4177c215019aSStefano Zampini 4178c215019aSStefano Zampini PetscFunctionBegin; 4179c215019aSStefano Zampini dmem = isCudaMem(v); 4180c215019aSStefano Zampini ierr = MatSeqAIJCUSPARSEGetArrayRead(A,&av);CHKERRQ(ierr); 4181c215019aSStefano Zampini if (n && idx) { 4182c215019aSStefano Zampini THRUSTINTARRAY widx(n); 4183c215019aSStefano Zampini widx.assign(idx,idx+n); 4184c215019aSStefano Zampini ierr = PetscLogCpuToGpu(n*sizeof(PetscInt));CHKERRQ(ierr); 4185c215019aSStefano Zampini 4186c215019aSStefano Zampini THRUSTARRAY *w = NULL; 4187c215019aSStefano Zampini thrust::device_ptr<PetscScalar> dv; 4188c215019aSStefano Zampini if (dmem) { 4189c215019aSStefano Zampini dv = thrust::device_pointer_cast(v); 4190c215019aSStefano Zampini } else { 4191c215019aSStefano Zampini w = new THRUSTARRAY(n); 4192c215019aSStefano Zampini dv = w->data(); 4193c215019aSStefano Zampini } 4194c215019aSStefano Zampini thrust::device_ptr<const PetscScalar> dav = thrust::device_pointer_cast(av); 4195c215019aSStefano Zampini 4196c215019aSStefano Zampini auto zibit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav,widx.begin()),dv)); 4197c215019aSStefano Zampini auto zieit = thrust::make_zip_iterator(thrust::make_tuple(thrust::make_permutation_iterator(dav,widx.end()),dv+n)); 4198c215019aSStefano Zampini thrust::for_each(zibit,zieit,VecCUDAEquals()); 4199c215019aSStefano Zampini if (w) { 4200c215019aSStefano Zampini cerr = cudaMemcpy(v,w->data().get(),n*sizeof(PetscScalar),cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4201c215019aSStefano Zampini } 4202c215019aSStefano Zampini delete w; 4203c215019aSStefano Zampini } else { 4204c215019aSStefano Zampini cerr = cudaMemcpy(v,av,n*sizeof(PetscScalar),dmem ? cudaMemcpyDeviceToDevice : cudaMemcpyDeviceToHost);CHKERRCUDA(cerr); 4205c215019aSStefano Zampini } 4206c215019aSStefano Zampini if (!dmem) { ierr = PetscLogCpuToGpu(n*sizeof(PetscScalar));CHKERRQ(ierr); } 4207c215019aSStefano Zampini ierr = MatSeqAIJCUSPARSERestoreArrayRead(A,&av);CHKERRQ(ierr); 4208c215019aSStefano Zampini PetscFunctionReturn(0); 4209c215019aSStefano Zampini } 4210