114b396bbSKris Buschelman /*$Id: superlu.c,v 1.10 2001/08/15 15:56:50 bsmith Exp $*/ 214b396bbSKris Buschelman 314b396bbSKris Buschelman /* 475af56d4SHong Zhang Provides an interface to the SuperLU 3.0 sparse solver 514b396bbSKris Buschelman */ 614b396bbSKris Buschelman 714b396bbSKris Buschelman #include "src/mat/impls/aij/seq/aij.h" 814b396bbSKris Buschelman 914b396bbSKris Buschelman EXTERN_C_BEGIN 1014b396bbSKris Buschelman #if defined(PETSC_USE_COMPLEX) 1114b396bbSKris Buschelman #include "zsp_defs.h" 1214b396bbSKris Buschelman #else 1314b396bbSKris Buschelman #include "dsp_defs.h" 1414b396bbSKris Buschelman #endif 1514b396bbSKris Buschelman #include "util.h" 1614b396bbSKris Buschelman EXTERN_C_END 1714b396bbSKris Buschelman 1814b396bbSKris Buschelman typedef struct { 1975af56d4SHong Zhang SuperMatrix A,L,U,B,X; 2075af56d4SHong Zhang superlu_options_t options; 2175af56d4SHong Zhang int *perm_c; /* column permutation vector */ 2275af56d4SHong Zhang int *perm_r; /* row permutations from partial pivoting */ 2375af56d4SHong Zhang int *etree; 2475af56d4SHong Zhang double *R, *C; 2575af56d4SHong Zhang char equed[1]; 2675af56d4SHong Zhang int lwork; 2775af56d4SHong Zhang void *work; 2875af56d4SHong Zhang double rpg, rcond; 2975af56d4SHong Zhang mem_usage_t mem_usage; 3075af56d4SHong Zhang MatStructure flg; 3114b396bbSKris Buschelman 3214b396bbSKris Buschelman /* A few function pointers for inheritance */ 33f0c56d0fSKris Buschelman int (*MatDuplicate)(Mat,MatDuplicateOption,Mat*); 3414b396bbSKris Buschelman int (*MatView)(Mat,PetscViewer); 3514b396bbSKris Buschelman int (*MatAssemblyEnd)(Mat,MatAssemblyType); 36b0592601SKris Buschelman int (*MatLUFactorSymbolic)(Mat,IS,IS,MatFactorInfo*,Mat*); 3714b396bbSKris Buschelman int (*MatDestroy)(Mat); 3814b396bbSKris Buschelman 3914b396bbSKris Buschelman /* Flag to clean up (non-global) SuperLU objects during Destroy */ 4014b396bbSKris Buschelman PetscTruth CleanUpSuperLU; 41f0c56d0fSKris Buschelman } Mat_SuperLU; 4214b396bbSKris Buschelman 4314b396bbSKris Buschelman 44f0c56d0fSKris Buschelman EXTERN int MatFactorInfo_SuperLU(Mat,PetscViewer); 45f0c56d0fSKris Buschelman EXTERN int MatLUFactorSymbolic_SuperLU(Mat,IS,IS,MatFactorInfo*,Mat*); 46b0592601SKris Buschelman 47b0592601SKris Buschelman EXTERN_C_BEGIN 48b0592601SKris Buschelman EXTERN int MatConvert_SuperLU_SeqAIJ(Mat,MatType,Mat*); 49b0592601SKris Buschelman EXTERN int MatConvert_SeqAIJ_SuperLU(Mat,MatType,Mat*); 50b0592601SKris Buschelman EXTERN_C_END 5114b396bbSKris Buschelman 5214b396bbSKris Buschelman #undef __FUNCT__ 53f0c56d0fSKris Buschelman #define __FUNCT__ "MatDestroy_SuperLU" 54f0c56d0fSKris Buschelman int MatDestroy_SuperLU(Mat A) 5514b396bbSKris Buschelman { 56460c4903SKris Buschelman int ierr; 57f0c56d0fSKris Buschelman Mat_SuperLU *lu = (Mat_SuperLU*)A->spptr; 5814b396bbSKris Buschelman 5914b396bbSKris Buschelman PetscFunctionBegin; 6075af56d4SHong Zhang if (lu->CleanUpSuperLU) { /* Free the SuperLU datastructures */ 6175af56d4SHong Zhang Destroy_SuperMatrix_Store(&lu->A); 6275af56d4SHong Zhang Destroy_SuperMatrix_Store(&lu->B); 6375af56d4SHong Zhang Destroy_SuperMatrix_Store(&lu->X); 649ce50919SHong Zhang 659ce50919SHong Zhang ierr = PetscFree(lu->etree);CHKERRQ(ierr); 669ce50919SHong Zhang ierr = PetscFree(lu->perm_r);CHKERRQ(ierr); 679ce50919SHong Zhang ierr = PetscFree(lu->perm_c);CHKERRQ(ierr); 689ce50919SHong Zhang ierr = PetscFree(lu->R);CHKERRQ(ierr); 699ce50919SHong Zhang ierr = PetscFree(lu->C);CHKERRQ(ierr); 7075af56d4SHong Zhang if ( lu->lwork >= 0 ) { 71fb3e25aaSKris Buschelman Destroy_SuperNode_Matrix(&lu->L); 72fb3e25aaSKris Buschelman Destroy_CompCol_Matrix(&lu->U); 7375af56d4SHong Zhang } 74fb3e25aaSKris Buschelman } 75b0592601SKris Buschelman ierr = MatConvert_SuperLU_SeqAIJ(A,MATSEQAIJ,&A);CHKERRQ(ierr); 76fb3e25aaSKris Buschelman ierr = (*A->ops->destroy)(A);CHKERRQ(ierr); 7714b396bbSKris Buschelman PetscFunctionReturn(0); 7814b396bbSKris Buschelman } 7914b396bbSKris Buschelman 8014b396bbSKris Buschelman #undef __FUNCT__ 81f0c56d0fSKris Buschelman #define __FUNCT__ "MatView_SuperLU" 82f0c56d0fSKris Buschelman int MatView_SuperLU(Mat A,PetscViewer viewer) 8314b396bbSKris Buschelman { 8414b396bbSKris Buschelman int ierr; 8514b396bbSKris Buschelman PetscTruth isascii; 8614b396bbSKris Buschelman PetscViewerFormat format; 87f0c56d0fSKris Buschelman Mat_SuperLU *lu=(Mat_SuperLU*)(A->spptr); 8814b396bbSKris Buschelman 8914b396bbSKris Buschelman PetscFunctionBegin; 9014b396bbSKris Buschelman ierr = (*lu->MatView)(A,viewer);CHKERRQ(ierr); 9114b396bbSKris Buschelman 9214b396bbSKris Buschelman ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr); 9314b396bbSKris Buschelman if (isascii) { 9414b396bbSKris Buschelman ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 9514b396bbSKris Buschelman if (format == PETSC_VIEWER_ASCII_FACTOR_INFO) { 96f0c56d0fSKris Buschelman ierr = MatFactorInfo_SuperLU(A,viewer);CHKERRQ(ierr); 9714b396bbSKris Buschelman } 9814b396bbSKris Buschelman } 9914b396bbSKris Buschelman PetscFunctionReturn(0); 10014b396bbSKris Buschelman } 10114b396bbSKris Buschelman 10214b396bbSKris Buschelman #undef __FUNCT__ 103f0c56d0fSKris Buschelman #define __FUNCT__ "MatAssemblyEnd_SuperLU" 104f0c56d0fSKris Buschelman int MatAssemblyEnd_SuperLU(Mat A,MatAssemblyType mode) { 10514b396bbSKris Buschelman int ierr; 106f0c56d0fSKris Buschelman Mat_SuperLU *lu=(Mat_SuperLU*)(A->spptr); 10714b396bbSKris Buschelman 10814b396bbSKris Buschelman PetscFunctionBegin; 10914b396bbSKris Buschelman ierr = (*lu->MatAssemblyEnd)(A,mode);CHKERRQ(ierr); 110b0592601SKris Buschelman 111b0592601SKris Buschelman lu->MatLUFactorSymbolic = A->ops->lufactorsymbolic; 112f0c56d0fSKris Buschelman A->ops->lufactorsymbolic = MatLUFactorSymbolic_SuperLU; 11314b396bbSKris Buschelman PetscFunctionReturn(0); 11414b396bbSKris Buschelman } 11514b396bbSKris Buschelman 11675af56d4SHong Zhang /* This function was written for SuperLU 2.0 by Matthew Knepley. Not tested for SuperLU 3.0! */ 11775af56d4SHong Zhang #ifdef SuperLU2 11814b396bbSKris Buschelman #include "src/mat/impls/dense/seq/dense.h" 11914b396bbSKris Buschelman #undef __FUNCT__ 120f0c56d0fSKris Buschelman #define __FUNCT__ "MatCreateNull_SuperLU" 121f0c56d0fSKris Buschelman int MatCreateNull_SuperLU(Mat A,Mat *nullMat) 12214b396bbSKris Buschelman { 123f0c56d0fSKris Buschelman Mat_SuperLU *lu = (Mat_SuperLU*)A->spptr; 12414b396bbSKris Buschelman int numRows = A->m,numCols = A->n; 12514b396bbSKris Buschelman SCformat *Lstore; 12614b396bbSKris Buschelman int numNullCols,size; 12775af56d4SHong Zhang SuperLUStat_t stat; 12814b396bbSKris Buschelman #if defined(PETSC_USE_COMPLEX) 12914b396bbSKris Buschelman doublecomplex *nullVals,*workVals; 13014b396bbSKris Buschelman #else 13114b396bbSKris Buschelman PetscScalar *nullVals,*workVals; 13214b396bbSKris Buschelman #endif 13314b396bbSKris Buschelman int row,newRow,col,newCol,block,b,ierr; 13414b396bbSKris Buschelman 13514b396bbSKris Buschelman PetscFunctionBegin; 13614b396bbSKris Buschelman PetscValidHeaderSpecific(A,MAT_COOKIE); 13714b396bbSKris Buschelman PetscValidPointer(nullMat); 13814b396bbSKris Buschelman if (!A->factor) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Unfactored matrix"); 13914b396bbSKris Buschelman numNullCols = numCols - numRows; 14014b396bbSKris Buschelman if (numNullCols < 0) SETERRQ(PETSC_ERR_ARG_WRONG,"Function only applies to underdetermined problems"); 14114b396bbSKris Buschelman /* Create the null matrix */ 14214b396bbSKris Buschelman ierr = MatCreateSeqDense(A->comm,numRows,numNullCols,PETSC_NULL,nullMat);CHKERRQ(ierr); 14314b396bbSKris Buschelman if (numNullCols == 0) { 14414b396bbSKris Buschelman ierr = MatAssemblyBegin(*nullMat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 14514b396bbSKris Buschelman ierr = MatAssemblyEnd(*nullMat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 14614b396bbSKris Buschelman PetscFunctionReturn(0); 14714b396bbSKris Buschelman } 14814b396bbSKris Buschelman #if defined(PETSC_USE_COMPLEX) 14914b396bbSKris Buschelman nullVals = (doublecomplex*)((Mat_SeqDense*)(*nullMat)->data)->v; 15014b396bbSKris Buschelman #else 15114b396bbSKris Buschelman nullVals = ((Mat_SeqDense*)(*nullMat)->data)->v; 15214b396bbSKris Buschelman #endif 15314b396bbSKris Buschelman /* Copy in the columns */ 15414b396bbSKris Buschelman Lstore = (SCformat*)lu->L.Store; 15514b396bbSKris Buschelman for(block = 0; block <= Lstore->nsuper; block++) { 15614b396bbSKris Buschelman newRow = Lstore->sup_to_col[block]; 15714b396bbSKris Buschelman size = Lstore->sup_to_col[block+1] - Lstore->sup_to_col[block]; 15814b396bbSKris Buschelman for(col = Lstore->rowind_colptr[newRow]; col < Lstore->rowind_colptr[newRow+1]; col++) { 15914b396bbSKris Buschelman newCol = Lstore->rowind[col]; 16014b396bbSKris Buschelman if (newCol >= numRows) { 16114b396bbSKris Buschelman for(b = 0; b < size; b++) 16214b396bbSKris Buschelman #if defined(PETSC_USE_COMPLEX) 16314b396bbSKris Buschelman nullVals[(newCol-numRows)*numRows+newRow+b] = ((doublecomplex*)Lstore->nzval)[Lstore->nzval_colptr[newRow+b]+col]; 16414b396bbSKris Buschelman #else 16514b396bbSKris Buschelman nullVals[(newCol-numRows)*numRows+newRow+b] = ((double*)Lstore->nzval)[Lstore->nzval_colptr[newRow+b]+col]; 16614b396bbSKris Buschelman #endif 16714b396bbSKris Buschelman } 16814b396bbSKris Buschelman } 16914b396bbSKris Buschelman } 17014b396bbSKris Buschelman /* Permute rhs to form P^T_c B */ 17114b396bbSKris Buschelman ierr = PetscMalloc(numRows*sizeof(double),&workVals);CHKERRQ(ierr); 17214b396bbSKris Buschelman for(b = 0; b < numNullCols; b++) { 17314b396bbSKris Buschelman for(row = 0; row < numRows; row++) workVals[lu->perm_c[row]] = nullVals[b*numRows+row]; 17414b396bbSKris Buschelman for(row = 0; row < numRows; row++) nullVals[b*numRows+row] = workVals[row]; 17514b396bbSKris Buschelman } 17614b396bbSKris Buschelman /* Backward solve the upper triangle A x = b */ 17714b396bbSKris Buschelman for(b = 0; b < numNullCols; b++) { 17814b396bbSKris Buschelman #if defined(PETSC_USE_COMPLEX) 17975af56d4SHong Zhang sp_ztrsv("L","T","U",&lu->L,&lu->U,&nullVals[b*numRows],&stat,&ierr); 18014b396bbSKris Buschelman #else 18175af56d4SHong Zhang sp_dtrsv("L","T","U",&lu->L,&lu->U,&nullVals[b*numRows],&stat,&ierr); 18214b396bbSKris Buschelman #endif 18314b396bbSKris Buschelman if (ierr < 0) 18414b396bbSKris Buschelman SETERRQ1(PETSC_ERR_ARG_WRONG,"The argument %d was invalid",-ierr); 18514b396bbSKris Buschelman } 18614b396bbSKris Buschelman ierr = PetscFree(workVals);CHKERRQ(ierr); 18714b396bbSKris Buschelman 18814b396bbSKris Buschelman ierr = MatAssemblyBegin(*nullMat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 18914b396bbSKris Buschelman ierr = MatAssemblyEnd(*nullMat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 19014b396bbSKris Buschelman PetscFunctionReturn(0); 19114b396bbSKris Buschelman } 19275af56d4SHong Zhang #endif 19314b396bbSKris Buschelman 19414b396bbSKris Buschelman #undef __FUNCT__ 195f0c56d0fSKris Buschelman #define __FUNCT__ "MatSolve_SuperLU" 196f0c56d0fSKris Buschelman int MatSolve_SuperLU(Mat A,Vec b,Vec x) 19714b396bbSKris Buschelman { 198f0c56d0fSKris Buschelman Mat_SuperLU *lu = (Mat_SuperLU*)A->spptr; 19975af56d4SHong Zhang PetscScalar *barray,*xarray; 2008914a3f7SHong Zhang int ierr,info,i; 20175af56d4SHong Zhang SuperLUStat_t stat; 2028914a3f7SHong Zhang double ferr,berr; 20314b396bbSKris Buschelman 20414b396bbSKris Buschelman PetscFunctionBegin; 20575af56d4SHong Zhang lu->B.ncol = 1; /* Set the number of right-hand side */ 20675af56d4SHong Zhang ierr = VecGetArray(b,&barray);CHKERRQ(ierr); 20775af56d4SHong Zhang ierr = VecGetArray(x,&xarray);CHKERRQ(ierr); 208*5fe6150dSHong Zhang 209*5fe6150dSHong Zhang #if defined(PETSC_USE_COMPLEX) 210*5fe6150dSHong Zhang ((DNformat*)lu->B.Store)->nzval = (doublecomplex*)barray; 211*5fe6150dSHong Zhang ((DNformat*)lu->X.Store)->nzval = (doublecomplex*)xarray; 212*5fe6150dSHong Zhang #else 213*5fe6150dSHong Zhang ((DNformat*)lu->B.Store)->nzval = barray; 21475af56d4SHong Zhang ((DNformat*)lu->X.Store)->nzval = xarray; 215*5fe6150dSHong Zhang #endif 21675af56d4SHong Zhang 21775af56d4SHong Zhang /* Initialize the statistics variables. */ 21875af56d4SHong Zhang StatInit(&stat); 21975af56d4SHong Zhang 22075af56d4SHong Zhang lu->options.Fact = FACTORED; /* Indicate the factored form of A is supplied. */ 22175af56d4SHong Zhang lu->options.Trans = TRANS; 2228914a3f7SHong Zhang #if defined(PETSC_USE_COMPLEX) 2238914a3f7SHong Zhang zgssvx(&lu->options, &lu->A, lu->perm_c, lu->perm_r, lu->etree, lu->equed, lu->R, lu->C, 2248914a3f7SHong Zhang &lu->L, &lu->U, lu->work, lu->lwork, &lu->B, &lu->X, &lu->rpg, &lu->rcond, &ferr, &berr, 2258914a3f7SHong Zhang &lu->mem_usage, &stat, &info); 2268914a3f7SHong Zhang #else 22775af56d4SHong Zhang dgssvx(&lu->options, &lu->A, lu->perm_c, lu->perm_r, lu->etree, lu->equed, lu->R, lu->C, 22875af56d4SHong Zhang &lu->L, &lu->U, lu->work, lu->lwork, &lu->B, &lu->X, &lu->rpg, &lu->rcond, &ferr, &berr, 22975af56d4SHong Zhang &lu->mem_usage, &stat, &info); 2308914a3f7SHong Zhang #endif 23175af56d4SHong Zhang ierr = VecRestoreArray(b,&barray);CHKERRQ(ierr); 23275af56d4SHong Zhang ierr = VecRestoreArray(x,&xarray);CHKERRQ(ierr); 23375af56d4SHong Zhang 23475af56d4SHong Zhang if ( info == 0 || info == lu->A.ncol+1 ) { 23575af56d4SHong Zhang if ( lu->options.IterRefine ) { 2368914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF,"Iterative Refinement:\n"); 2378914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF," %8s%8s%16s%16s\n", "rhs", "Steps", "FERR", "BERR"); 23875af56d4SHong Zhang for (i = 0; i < 1; ++i) 2398914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF," %8d%8d%16e%16e\n", i+1, stat.RefineSteps, ferr, berr); 24075af56d4SHong Zhang } 2418914a3f7SHong Zhang } else if ( info > 0 ){ 2428914a3f7SHong Zhang if ( lu->lwork == -1 ) { 2438914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF," ** Estimated memory: %d bytes\n", info - lu->A.ncol); 2448914a3f7SHong Zhang } else { 2458914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF," Warning: gssvx() returns info %d\n",info); 2468914a3f7SHong Zhang } 2478914a3f7SHong Zhang } else if (info < 0){ 2488914a3f7SHong Zhang SETERRQ2(1, "info = %d, the %d-th argument in gssvx() had an illegal value", info,-info); 24914b396bbSKris Buschelman } 25014b396bbSKris Buschelman 2518914a3f7SHong Zhang if ( lu->options.PrintStat ) { 2528914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF,"MatSolve__SuperLU():\n"); 2538914a3f7SHong Zhang StatPrint(&stat); 2548914a3f7SHong Zhang } 25575af56d4SHong Zhang StatFree(&stat); 25675af56d4SHong Zhang PetscFunctionReturn(0); 25775af56d4SHong Zhang } 25814b396bbSKris Buschelman 25914b396bbSKris Buschelman #undef __FUNCT__ 260f0c56d0fSKris Buschelman #define __FUNCT__ "MatLUFactorNumeric_SuperLU" 261f0c56d0fSKris Buschelman int MatLUFactorNumeric_SuperLU(Mat A,Mat *F) 26214b396bbSKris Buschelman { 26314b396bbSKris Buschelman Mat_SeqAIJ *aa = (Mat_SeqAIJ*)(A)->data; 264f0c56d0fSKris Buschelman Mat_SuperLU *lu = (Mat_SuperLU*)(*F)->spptr; 26575af56d4SHong Zhang int ierr,info; 26614b396bbSKris Buschelman PetscTruth flag; 26775af56d4SHong Zhang SuperLUStat_t stat; 26875af56d4SHong Zhang double ferr, berr; 2698914a3f7SHong Zhang NCformat *Ustore; 2708914a3f7SHong Zhang SCformat *Lstore; 27114b396bbSKris Buschelman 27214b396bbSKris Buschelman PetscFunctionBegin; 2739ce50919SHong Zhang if (lu->flg == SAME_NONZERO_PATTERN){ /* successing numerical factorization */ 2749ce50919SHong Zhang lu->options.Fact = SamePattern; 27575af56d4SHong Zhang /* Ref: ~SuperLU_3.0/EXAMPLE/dlinsolx2.c */ 27675af56d4SHong Zhang Destroy_SuperMatrix_Store(&lu->A); 2779ce50919SHong Zhang if ( lu->lwork >= 0 ) { 27875af56d4SHong Zhang Destroy_SuperNode_Matrix(&lu->L); 27975af56d4SHong Zhang Destroy_CompCol_Matrix(&lu->U); 28075af56d4SHong Zhang lu->options.Fact = SamePattern; 28114b396bbSKris Buschelman } 28275af56d4SHong Zhang } 28314b396bbSKris Buschelman 28475af56d4SHong Zhang /* Create the SuperMatrix for lu->A=A^T: 28575af56d4SHong Zhang Since SuperLU likes column-oriented matrices,we pass it the transpose, 28675af56d4SHong Zhang and then solve A^T X = B in MatSolve(). */ 28775af56d4SHong Zhang #if defined(PETSC_USE_COMPLEX) 288*5fe6150dSHong Zhang zCreate_CompCol_Matrix(&lu->A,A->n,A->m,aa->nz,(doublecomplex*)aa->a,aa->j,aa->i, 28975af56d4SHong Zhang SLU_NC,SLU_Z,SLU_GE); 29075af56d4SHong Zhang #else 29175af56d4SHong Zhang dCreate_CompCol_Matrix(&lu->A,A->n,A->m,aa->nz,aa->a,aa->j,aa->i, 29275af56d4SHong Zhang SLU_NC,SLU_D,SLU_GE); 29375af56d4SHong Zhang #endif 29475af56d4SHong Zhang 29575af56d4SHong Zhang /* Initialize the statistics variables. */ 29675af56d4SHong Zhang StatInit(&stat); 29775af56d4SHong Zhang 2989ce50919SHong Zhang /* Numerical factorization */ 29975af56d4SHong Zhang lu->B.ncol = 0; /* Indicate not to solve the system */ 3008914a3f7SHong Zhang #if defined(PETSC_USE_COMPLEX) 3018914a3f7SHong Zhang zgssvx(&lu->options, &lu->A, lu->perm_c, lu->perm_r, lu->etree, lu->equed, lu->R, lu->C, 3028914a3f7SHong Zhang &lu->L, &lu->U, lu->work, lu->lwork, &lu->B, &lu->X, &lu->rpg, &lu->rcond, &ferr, &berr, 3038914a3f7SHong Zhang &lu->mem_usage, &stat, &info); 3048914a3f7SHong Zhang #else 30575af56d4SHong Zhang dgssvx(&lu->options, &lu->A, lu->perm_c, lu->perm_r, lu->etree, lu->equed, lu->R, lu->C, 30675af56d4SHong Zhang &lu->L, &lu->U, lu->work, lu->lwork, &lu->B, &lu->X, &lu->rpg, &lu->rcond, &ferr, &berr, 30775af56d4SHong Zhang &lu->mem_usage, &stat, &info); 3088914a3f7SHong Zhang #endif 30975af56d4SHong Zhang if ( info == 0 || info == lu->A.ncol+1 ) { 3108914a3f7SHong Zhang if ( lu->options.PivotGrowth ) 3118914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF," Recip. pivot growth = %e\n", lu->rpg); 31275af56d4SHong Zhang if ( lu->options.ConditionNumber ) 3138914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF," Recip. condition number = %e\n", lu->rcond); 3148914a3f7SHong Zhang } else if ( info > 0 ){ 3158914a3f7SHong Zhang if ( lu->lwork == -1 ) { 3168914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF," ** Estimated memory: %d bytes\n", info - lu->A.ncol); 3178914a3f7SHong Zhang } else { 3188914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF," Warning: gssvx() returns info %d\n",info); 3198914a3f7SHong Zhang } 3208914a3f7SHong Zhang } else if (info < 0){ 3218914a3f7SHong Zhang SETERRQ2(1, "info = %d, the %d-th argument in gssvx() had an illegal value", info,-info); 32275af56d4SHong Zhang } 32375af56d4SHong Zhang 3248914a3f7SHong Zhang if ( lu->options.PrintStat ) { 3258914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF,"MatLUFactorNumeric_SuperLU():\n"); 3268914a3f7SHong Zhang StatPrint(&stat); 3278914a3f7SHong Zhang Lstore = (SCformat *) lu->L.Store; 3288914a3f7SHong Zhang Ustore = (NCformat *) lu->U.Store; 3298914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF," No of nonzeros in factor L = %d\n", Lstore->nnz); 3308914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF," No of nonzeros in factor U = %d\n", Ustore->nnz); 3318914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF," No of nonzeros in L+U = %d\n", Lstore->nnz + Ustore->nnz - lu->A.ncol); 3328914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF," L\\U MB %.3f\ttotal MB needed %.3f\texpansions %d\n", 3338914a3f7SHong Zhang lu->mem_usage.for_lu/1e6, lu->mem_usage.total_needed/1e6, 3348914a3f7SHong Zhang lu->mem_usage.expansions); 3358914a3f7SHong Zhang } 33675af56d4SHong Zhang StatFree(&stat); 33775af56d4SHong Zhang 33875af56d4SHong Zhang lu->flg = SAME_NONZERO_PATTERN; 33975af56d4SHong Zhang PetscFunctionReturn(0); 34014b396bbSKris Buschelman } 34114b396bbSKris Buschelman 34214b396bbSKris Buschelman /* 34314b396bbSKris Buschelman Note the r permutation is ignored 34414b396bbSKris Buschelman */ 34514b396bbSKris Buschelman #undef __FUNCT__ 346f0c56d0fSKris Buschelman #define __FUNCT__ "MatLUFactorSymbolic_SuperLU" 347f0c56d0fSKris Buschelman int MatLUFactorSymbolic_SuperLU(Mat A,IS r,IS c,MatFactorInfo *info,Mat *F) 34814b396bbSKris Buschelman { 34914b396bbSKris Buschelman Mat B; 350f0c56d0fSKris Buschelman Mat_SuperLU *lu; 3519ce50919SHong Zhang int ierr,m=A->m,n=A->n,indx; 3529ce50919SHong Zhang PetscTruth flg; 3538914a3f7SHong Zhang char *colperm[]={"NATURAL","MMD_ATA","MMD_AT_PLUS_A","COLAMD"}; /* MY_PERMC - not supported by the petsc interface yet */ 3549ce50919SHong Zhang char *iterrefine[]={"NOREFINE", "SINGLE", "DOUBLE", "EXTRA"}; 3558914a3f7SHong Zhang char *rowperm[]={"NOROWPERM", "LargeDiag"}; /* MY_PERMC - not supported by the petsc interface yet */ 35614b396bbSKris Buschelman 35714b396bbSKris Buschelman PetscFunctionBegin; 35814b396bbSKris Buschelman 359899d7b4fSKris Buschelman ierr = MatCreate(A->comm,A->m,A->n,PETSC_DETERMINE,PETSC_DETERMINE,&B);CHKERRQ(ierr); 360899d7b4fSKris Buschelman ierr = MatSetType(B,MATSUPERLU);CHKERRQ(ierr); 361899d7b4fSKris Buschelman ierr = MatSeqAIJSetPreallocation(B,0,PETSC_NULL);CHKERRQ(ierr); 362f0c56d0fSKris Buschelman 363f0c56d0fSKris Buschelman B->ops->lufactornumeric = MatLUFactorNumeric_SuperLU; 364f0c56d0fSKris Buschelman B->ops->solve = MatSolve_SuperLU; 36514b396bbSKris Buschelman B->factor = FACTOR_LU; 36694b7f48cSBarry Smith B->assembled = PETSC_TRUE; /* required by -ksp_view */ 36714b396bbSKris Buschelman 368f0c56d0fSKris Buschelman lu = (Mat_SuperLU*)(B->spptr); 3699ce50919SHong Zhang 3709ce50919SHong Zhang /* Set SuperLU options */ 3719ce50919SHong Zhang /* the default values for options argument: 3729ce50919SHong Zhang options.Fact = DOFACT; 3739ce50919SHong Zhang options.Equil = YES; 3749ce50919SHong Zhang options.ColPerm = COLAMD; 3759ce50919SHong Zhang options.DiagPivotThresh = 1.0; 3769ce50919SHong Zhang options.Trans = NOTRANS; 3779ce50919SHong Zhang options.IterRefine = NOREFINE; 3789ce50919SHong Zhang options.SymmetricMode = NO; 3799ce50919SHong Zhang options.PivotGrowth = NO; 3809ce50919SHong Zhang options.ConditionNumber = NO; 3819ce50919SHong Zhang options.PrintStat = YES; 3829ce50919SHong Zhang */ 3839ce50919SHong Zhang set_default_options(&lu->options); 3848914a3f7SHong Zhang /* equilibration causes error in solve(), thus not supported here. See dgssvx.c for possible reason. */ 3858914a3f7SHong Zhang lu->options.Equil = NO; 3869ce50919SHong Zhang lu->options.PrintStat = NO; 3878914a3f7SHong Zhang lu->lwork = 0; /* allocate space internally by system malloc */ 3889ce50919SHong Zhang 3899ce50919SHong Zhang ierr = PetscOptionsBegin(A->comm,A->prefix,"SuperLU Options","Mat");CHKERRQ(ierr); 3909ce50919SHong Zhang /* 3918914a3f7SHong Zhang ierr = PetscOptionsLogical("-mat_superlu_equil","Equil","None",PETSC_FALSE,&flg,0);CHKERRQ(ierr); 3928914a3f7SHong Zhang if (flg) lu->options.Equil = YES; -- not supported by the interface !!! 3939ce50919SHong Zhang */ 3948914a3f7SHong Zhang ierr = PetscOptionsEList("-mat_superlu_colperm","ColPerm","None",colperm,4,colperm[3],&indx,&flg);CHKERRQ(ierr); 3959ce50919SHong Zhang if (flg) {lu->options.ColPerm = (colperm_t)indx;} 3968914a3f7SHong Zhang ierr = PetscOptionsEList("-mat_superlu_iterrefine","IterRefine","None",iterrefine,4,iterrefine[0],&indx,&flg);CHKERRQ(ierr); 3979ce50919SHong Zhang if (flg) { lu->options.IterRefine = (IterRefine_t)indx;} 3988914a3f7SHong Zhang ierr = PetscOptionsLogical("-mat_superlu_symmetricmode","SymmetricMode","None",PETSC_FALSE,&flg,0);CHKERRQ(ierr); 3999ce50919SHong Zhang if (flg) lu->options.SymmetricMode = YES; 4008914a3f7SHong Zhang ierr = PetscOptionsReal("-mat_superlu_diagpivotthresh","DiagPivotThresh","None",lu->options.DiagPivotThresh,&lu->options.DiagPivotThresh,PETSC_NULL);CHKERRQ(ierr); 4018914a3f7SHong Zhang ierr = PetscOptionsLogical("-mat_superlu_pivotgrowth","PivotGrowth","None",PETSC_FALSE,&flg,0);CHKERRQ(ierr); 4029ce50919SHong Zhang if (flg) lu->options.PivotGrowth = YES; 4038914a3f7SHong Zhang ierr = PetscOptionsLogical("-mat_superlu_conditionnumber","ConditionNumber","None",PETSC_FALSE,&flg,0);CHKERRQ(ierr); 4049ce50919SHong Zhang if (flg) lu->options.ConditionNumber = YES; 4058914a3f7SHong Zhang ierr = PetscOptionsEList("-mat_superlu_rowperm","rowperm","None",rowperm,2,rowperm[0],&indx,&flg);CHKERRQ(ierr); 4069ce50919SHong Zhang if (flg) {lu->options.RowPerm = (rowperm_t)indx;} 4078914a3f7SHong Zhang ierr = PetscOptionsLogical("-mat_superlu_replacetinypivot","ReplaceTinyPivot","None",PETSC_FALSE,&flg,0);CHKERRQ(ierr); 4089ce50919SHong Zhang if (flg) lu->options.ReplaceTinyPivot = YES; 4098914a3f7SHong Zhang ierr = PetscOptionsLogical("-mat_superlu_printstat","PrintStat","None",PETSC_FALSE,&flg,0);CHKERRQ(ierr); 4109ce50919SHong Zhang if (flg) lu->options.PrintStat = YES; 4118914a3f7SHong Zhang ierr = PetscOptionsInt("-mat_superlu_lwork","size of work array in bytes used by factorization","None",lu->lwork,&lu->lwork,PETSC_NULL);CHKERRQ(ierr); 412*5fe6150dSHong Zhang if (lu->lwork > 0 ){ 413*5fe6150dSHong Zhang ierr = PetscMalloc(lu->lwork,&lu->work);CHKERRQ(ierr); 414*5fe6150dSHong Zhang } else if (lu->lwork != 0 && lu->lwork != -1){ 4158914a3f7SHong Zhang ierr = PetscPrintf(PETSC_COMM_SELF," Warning: lwork %d is not supported by PETSc interface. The default lwork=0 is used.\n",lu->lwork); 4168914a3f7SHong Zhang lu->lwork = 0; 4178914a3f7SHong Zhang } 4189ce50919SHong Zhang PetscOptionsEnd(); 4199ce50919SHong Zhang 42075af56d4SHong Zhang #ifdef SUPERLU2 4212ecb5974SKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatCreateNull","MatCreateNull_SuperLU", 422f0c56d0fSKris Buschelman (void(*)(void))MatCreateNull_SuperLU);CHKERRQ(ierr); 42375af56d4SHong Zhang #endif 42414b396bbSKris Buschelman 42575af56d4SHong Zhang /* Allocate spaces (notice sizes are for the transpose) */ 4269ce50919SHong Zhang ierr = PetscMalloc(m*sizeof(int),&lu->etree);CHKERRQ(ierr); 4279ce50919SHong Zhang ierr = PetscMalloc(n*sizeof(int),&lu->perm_r);CHKERRQ(ierr); 4289ce50919SHong Zhang ierr = PetscMalloc(m*sizeof(int),&lu->perm_c);CHKERRQ(ierr); 4299ce50919SHong Zhang ierr = PetscMalloc(n*sizeof(int),&lu->R);CHKERRQ(ierr); 4309ce50919SHong Zhang ierr = PetscMalloc(m*sizeof(int),&lu->C);CHKERRQ(ierr); 43175af56d4SHong Zhang 4329ce50919SHong Zhang /* create rhs and solution x without allocate space for .Store */ 433*5fe6150dSHong Zhang #if defined(PETSC_USE_COMPLEX) 434*5fe6150dSHong Zhang zCreate_Dense_Matrix(&lu->B, m, 1, PETSC_NULL, m, SLU_DN, SLU_D, SLU_GE); 435*5fe6150dSHong Zhang zCreate_Dense_Matrix(&lu->X, m, 1, PETSC_NULL, m, SLU_DN, SLU_D, SLU_GE); 436*5fe6150dSHong Zhang #else 43775af56d4SHong Zhang dCreate_Dense_Matrix(&lu->B, m, 1, PETSC_NULL, m, SLU_DN, SLU_D, SLU_GE); 43875af56d4SHong Zhang dCreate_Dense_Matrix(&lu->X, m, 1, PETSC_NULL, m, SLU_DN, SLU_D, SLU_GE); 439*5fe6150dSHong Zhang #endif 44014b396bbSKris Buschelman 44114b396bbSKris Buschelman lu->flg = DIFFERENT_NONZERO_PATTERN; 442e740cb95SKris Buschelman lu->CleanUpSuperLU = PETSC_TRUE; 443899d7b4fSKris Buschelman 444899d7b4fSKris Buschelman *F = B; 4459ce50919SHong Zhang PetscLogObjectMemory(B,(A->m+A->n)*sizeof(int)+sizeof(Mat_SuperLU)); 44614b396bbSKris Buschelman PetscFunctionReturn(0); 44714b396bbSKris Buschelman } 44814b396bbSKris Buschelman 44994b7f48cSBarry Smith /* used by -ksp_view */ 45014b396bbSKris Buschelman #undef __FUNCT__ 451f0c56d0fSKris Buschelman #define __FUNCT__ "MatFactorInfo_SuperLU" 452f0c56d0fSKris Buschelman int MatFactorInfo_SuperLU(Mat A,PetscViewer viewer) 45314b396bbSKris Buschelman { 454f0c56d0fSKris Buschelman Mat_SuperLU *lu= (Mat_SuperLU*)A->spptr; 455f0c56d0fSKris Buschelman int ierr; 4569ce50919SHong Zhang superlu_options_t options; 457f0c56d0fSKris Buschelman 458f0c56d0fSKris Buschelman PetscFunctionBegin; 4599ce50919SHong Zhang /* check if matrix is superlu_dist type */ 4609ce50919SHong Zhang if (A->ops->solve != MatSolve_SuperLU) PetscFunctionReturn(0); 4619ce50919SHong Zhang 4629ce50919SHong Zhang options = lu->options; 463f0c56d0fSKris Buschelman ierr = PetscViewerASCIIPrintf(viewer,"SuperLU run parameters:\n");CHKERRQ(ierr); 4649ce50919SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Equil: %s\n",(options.Equil != NO) ? "YES": "NO");CHKERRQ(ierr); 4659ce50919SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ColPerm: %d\n",options.ColPerm);CHKERRQ(ierr); 4669ce50919SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," IterRefine: %d\n",options.IterRefine);CHKERRQ(ierr); 4679ce50919SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," SymmetricMode: %s\n",(options.SymmetricMode != NO) ? "YES": "NO");CHKERRQ(ierr); 4689ce50919SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," DiagPivotThresh: %g\n",options.DiagPivotThresh);CHKERRQ(ierr); 4699ce50919SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," PivotGrowth: %s\n",(options.PivotGrowth != NO) ? "YES": "NO");CHKERRQ(ierr); 4709ce50919SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ConditionNumber: %s\n",(options.ConditionNumber != NO) ? "YES": "NO");CHKERRQ(ierr); 4719ce50919SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," RowPerm: %d\n",options.RowPerm);CHKERRQ(ierr); 4729ce50919SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," ReplaceTinyPivot: %s\n",(options.ReplaceTinyPivot != NO) ? "YES": "NO");CHKERRQ(ierr); 4739ce50919SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," PrintStat: %s\n",(options.PrintStat != NO) ? "YES": "NO");CHKERRQ(ierr); 4748914a3f7SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," lwork: %d\n",lu->lwork);CHKERRQ(ierr); 4759ce50919SHong Zhang 476f0c56d0fSKris Buschelman PetscFunctionReturn(0); 477f0c56d0fSKris Buschelman } 478f0c56d0fSKris Buschelman 479f0c56d0fSKris Buschelman #undef __FUNCT__ 480f0c56d0fSKris Buschelman #define __FUNCT__ "MatDuplicate_SuperLU" 481f0c56d0fSKris Buschelman int MatDuplicate_SuperLU(Mat A, MatDuplicateOption op, Mat *M) { 48214b396bbSKris Buschelman int ierr; 4838f340917SKris Buschelman Mat_SuperLU *lu=(Mat_SuperLU *)A->spptr; 4848f340917SKris Buschelman 48514b396bbSKris Buschelman PetscFunctionBegin; 4868f340917SKris Buschelman ierr = (*lu->MatDuplicate)(A,op,M);CHKERRQ(ierr); 487f0c56d0fSKris Buschelman ierr = MatConvert_SeqAIJ_SuperLU(*M,MATSUPERLU,M);CHKERRQ(ierr); 4883f953163SKris Buschelman ierr = PetscMemcpy((*M)->spptr,lu,sizeof(Mat_SuperLU));CHKERRQ(ierr); 48914b396bbSKris Buschelman PetscFunctionReturn(0); 49014b396bbSKris Buschelman } 49114b396bbSKris Buschelman 49214b396bbSKris Buschelman EXTERN_C_BEGIN 49314b396bbSKris Buschelman #undef __FUNCT__ 494b0592601SKris Buschelman #define __FUNCT__ "MatConvert_SuperLU_SeqAIJ" 495b0592601SKris Buschelman int MatConvert_SuperLU_SeqAIJ(Mat A,MatType type,Mat *newmat) { 496fb3e25aaSKris Buschelman /* This routine is only called to convert an unfactored PETSc-SuperLU matrix */ 497fb3e25aaSKris Buschelman /* to its base PETSc type, so we will ignore 'MatType type'. */ 49814b396bbSKris Buschelman int ierr; 499b0592601SKris Buschelman Mat B=*newmat; 500f0c56d0fSKris Buschelman Mat_SuperLU *lu=(Mat_SuperLU *)A->spptr; 501b0592601SKris Buschelman 502b0592601SKris Buschelman PetscFunctionBegin; 503b0592601SKris Buschelman if (B != A) { 504b0592601SKris Buschelman ierr = MatDuplicate(A,MAT_COPY_VALUES,&B);CHKERRQ(ierr); 505f0c56d0fSKris Buschelman } 506b0592601SKris Buschelman /* Reset the original function pointers */ 507f0c56d0fSKris Buschelman B->ops->duplicate = lu->MatDuplicate; 508b0592601SKris Buschelman B->ops->view = lu->MatView; 509b0592601SKris Buschelman B->ops->assemblyend = lu->MatAssemblyEnd; 510b0592601SKris Buschelman B->ops->lufactorsymbolic = lu->MatLUFactorSymbolic; 511b0592601SKris Buschelman B->ops->destroy = lu->MatDestroy; 512b0592601SKris Buschelman /* lu is only a function pointer stash unless we've factored the matrix, which we haven't! */ 513b0592601SKris Buschelman ierr = PetscFree(lu);CHKERRQ(ierr); 514b0592601SKris Buschelman ierr = PetscObjectChangeTypeName((PetscObject)B,MATSEQAIJ);CHKERRQ(ierr); 515b0592601SKris Buschelman *newmat = B; 516b0592601SKris Buschelman PetscFunctionReturn(0); 517b0592601SKris Buschelman } 518b0592601SKris Buschelman EXTERN_C_END 519b0592601SKris Buschelman 520b0592601SKris Buschelman EXTERN_C_BEGIN 521b0592601SKris Buschelman #undef __FUNCT__ 522b0592601SKris Buschelman #define __FUNCT__ "MatConvert_SeqAIJ_SuperLU" 523b0592601SKris Buschelman int MatConvert_SeqAIJ_SuperLU(Mat A,MatType type,Mat *newmat) { 524fb3e25aaSKris Buschelman /* This routine is only called to convert to MATSUPERLU */ 525fb3e25aaSKris Buschelman /* from MATSEQAIJ, so we will ignore 'MatType type'. */ 526b0592601SKris Buschelman int ierr; 527b0592601SKris Buschelman Mat B=*newmat; 528f0c56d0fSKris Buschelman Mat_SuperLU *lu; 52914b396bbSKris Buschelman 53014b396bbSKris Buschelman PetscFunctionBegin; 531b0592601SKris Buschelman if (B != A) { 532b0592601SKris Buschelman ierr = MatDuplicate(A,MAT_COPY_VALUES,&B);CHKERRQ(ierr); 533b0592601SKris Buschelman } 53414b396bbSKris Buschelman 535f0c56d0fSKris Buschelman ierr = PetscNew(Mat_SuperLU,&lu);CHKERRQ(ierr); 536f0c56d0fSKris Buschelman lu->MatDuplicate = A->ops->duplicate; 53714b396bbSKris Buschelman lu->MatView = A->ops->view; 53814b396bbSKris Buschelman lu->MatAssemblyEnd = A->ops->assemblyend; 539b0592601SKris Buschelman lu->MatLUFactorSymbolic = A->ops->lufactorsymbolic; 54014b396bbSKris Buschelman lu->MatDestroy = A->ops->destroy; 54114b396bbSKris Buschelman lu->CleanUpSuperLU = PETSC_FALSE; 542b0592601SKris Buschelman 543b0592601SKris Buschelman B->spptr = (void*)lu; 544f0c56d0fSKris Buschelman B->ops->duplicate = MatDuplicate_SuperLU; 545f0c56d0fSKris Buschelman B->ops->view = MatView_SuperLU; 546f0c56d0fSKris Buschelman B->ops->assemblyend = MatAssemblyEnd_SuperLU; 547f0c56d0fSKris Buschelman B->ops->lufactorsymbolic = MatLUFactorSymbolic_SuperLU; 548f0c56d0fSKris Buschelman B->ops->destroy = MatDestroy_SuperLU; 549b0592601SKris Buschelman 550b0592601SKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_seqaij_superlu_C", 551b0592601SKris Buschelman "MatConvert_SeqAIJ_SuperLU",MatConvert_SeqAIJ_SuperLU);CHKERRQ(ierr); 552b0592601SKris Buschelman ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatConvert_superlu_seqaij_C", 553b0592601SKris Buschelman "MatConvert_SuperLU_SeqAIJ",MatConvert_SuperLU_SeqAIJ);CHKERRQ(ierr); 554fb3e25aaSKris Buschelman PetscLogInfo(0,"Using SuperLU for SeqAIJ LU factorization and solves."); 555fb3e25aaSKris Buschelman ierr = PetscObjectChangeTypeName((PetscObject)B,MATSUPERLU);CHKERRQ(ierr); 556b0592601SKris Buschelman *newmat = B; 557b0592601SKris Buschelman PetscFunctionReturn(0); 558b0592601SKris Buschelman } 559b0592601SKris Buschelman EXTERN_C_END 560b0592601SKris Buschelman 56124b6179bSKris Buschelman /*MC 562fafad747SKris Buschelman MATSUPERLU - MATSUPERLU = "superlu" - A matrix type providing direct solvers (LU) for sequential matrices 56324b6179bSKris Buschelman via the external package SuperLU. 56424b6179bSKris Buschelman 56524b6179bSKris Buschelman If SuperLU is installed (see the manual for 56624b6179bSKris Buschelman instructions on how to declare the existence of external packages), 56724b6179bSKris Buschelman a matrix type can be constructed which invokes SuperLU solvers. 56824b6179bSKris Buschelman After calling MatCreate(...,A), simply call MatSetType(A,MATSUPERLU). 56924b6179bSKris Buschelman This matrix type is only supported for double precision real. 57024b6179bSKris Buschelman 57124b6179bSKris Buschelman This matrix inherits from MATSEQAIJ. As a result, MatSeqAIJSetPreallocation is 57228b08bd3SKris Buschelman supported for this matrix type. One can also call MatConvert for an inplace conversion to or from 57328b08bd3SKris Buschelman the MATSEQAIJ type without data copy. 57424b6179bSKris Buschelman 57524b6179bSKris Buschelman Options Database Keys: 5760bad9183SKris Buschelman + -mat_type superlu - sets the matrix type to "superlu" during a call to MatSetFromOptions() 57724b6179bSKris Buschelman - -mat_superlu_ordering <0,1,2,3> - 0: natural ordering, 57824b6179bSKris Buschelman 1: MMD applied to A'*A, 57924b6179bSKris Buschelman 2: MMD applied to A'+A, 58024b6179bSKris Buschelman 3: COLAMD, approximate minimum degree column ordering 58124b6179bSKris Buschelman 58224b6179bSKris Buschelman Level: beginner 58324b6179bSKris Buschelman 58424b6179bSKris Buschelman .seealso: PCLU 58524b6179bSKris Buschelman M*/ 58624b6179bSKris Buschelman 587b0592601SKris Buschelman EXTERN_C_BEGIN 588b0592601SKris Buschelman #undef __FUNCT__ 589f0c56d0fSKris Buschelman #define __FUNCT__ "MatCreate_SuperLU" 590f0c56d0fSKris Buschelman int MatCreate_SuperLU(Mat A) { 591b0592601SKris Buschelman int ierr; 592b0592601SKris Buschelman 593b0592601SKris Buschelman PetscFunctionBegin; 5945441df8eSKris Buschelman /* Change type name before calling MatSetType to force proper construction of SeqAIJ and SUPERLU types */ 5955441df8eSKris Buschelman ierr = PetscObjectChangeTypeName((PetscObject)A,MATSUPERLU);CHKERRQ(ierr); 596b0592601SKris Buschelman ierr = MatSetType(A,MATSEQAIJ);CHKERRQ(ierr); 597b0592601SKris Buschelman ierr = MatConvert_SeqAIJ_SuperLU(A,MATSUPERLU,&A);CHKERRQ(ierr); 59814b396bbSKris Buschelman PetscFunctionReturn(0); 59914b396bbSKris Buschelman } 60014b396bbSKris Buschelman EXTERN_C_END 601