11677d0b8SKris Buschelman 21677d0b8SKris Buschelman /* 3d515b9b4SShri Abhyankar Provides an interface to the UMFPACK sparse solver available through SuiteSparse version 4.2.1 42d4e2982SHong Zhang 59e475b0dSSatish Balay When build with PETSC_USE_64BIT_INDICES this will use Suitesparse_long as the 68592901bSBarry Smith integer type in UMFPACK, otherwise it will use int. This means 78592901bSBarry Smith all integers in this file as simply declared as PetscInt. Also it means 89e475b0dSSatish Balay that one cannot use 64BIT_INDICES on 32bit machines [as Suitesparse_long is 32bit only] 92d4e2982SHong Zhang 101677d0b8SKris Buschelman */ 11c6db04a5SJed Brown #include <../src/mat/impls/aij/seq/aij.h> 121677d0b8SKris Buschelman 138592901bSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 148592901bSBarry Smith #if defined(PETSC_USE_COMPLEX) 158592901bSBarry Smith #define umfpack_UMF_free_symbolic umfpack_zl_free_symbolic 168592901bSBarry Smith #define umfpack_UMF_free_numeric umfpack_zl_free_numeric 17d755ee67SBarry Smith /* the type casts are needed because PetscInt is long long while SuiteSparse_long is long and compilers warn even when they are identical */ 18d755ee67SBarry Smith #define umfpack_UMF_wsolve(a,b,c,d,e,f,g,h,i,j,k,l,m,n) umfpack_zl_wsolve(a,(SuiteSparse_long*)b,(SuiteSparse_long*)c,d,e,f,g,h,i,(SuiteSparse_long*)j,k,l,(SuiteSparse_long*)m,n) 19d755ee67SBarry Smith #define umfpack_UMF_numeric(a,b,c,d,e,f,g,h) umfpack_zl_numeric((SuiteSparse_long*)a,(SuiteSparse_long*)b,c,d,e,f,g,h) 208592901bSBarry Smith #define umfpack_UMF_report_numeric umfpack_zl_report_numeric 218592901bSBarry Smith #define umfpack_UMF_report_control umfpack_zl_report_control 228592901bSBarry Smith #define umfpack_UMF_report_status umfpack_zl_report_status 238592901bSBarry Smith #define umfpack_UMF_report_info umfpack_zl_report_info 248592901bSBarry Smith #define umfpack_UMF_report_symbolic umfpack_zl_report_symbolic 25d755ee67SBarry Smith #define umfpack_UMF_qsymbolic(a,b,c,d,e,f,g,h,i,j) umfpack_zl_qsymbolic(a,b,(SuiteSparse_long*)c,(SuiteSparse_long*)d,e,f,(SuiteSparse_long*)g,h,i,j) 26d755ee67SBarry Smith #define umfpack_UMF_symbolic(a,b,c,d,e,f,g,h,i) umfpack_zl_symbolic(a,b,(SuiteSparse_long*)c,(SuiteSparse_long*)d,e,f,g,h,i) 278592901bSBarry Smith #define umfpack_UMF_defaults umfpack_zl_defaults 288592901bSBarry Smith 298592901bSBarry Smith #else 308592901bSBarry Smith #define umfpack_UMF_free_symbolic umfpack_dl_free_symbolic 318592901bSBarry Smith #define umfpack_UMF_free_numeric umfpack_dl_free_numeric 32d755ee67SBarry Smith #define umfpack_UMF_wsolve(a,b,c,d,e,f,g,h,i,j,k) umfpack_dl_wsolve(a,(SuiteSparse_long*)b,(SuiteSparse_long*)c,d,e,f,g,h,i,(SuiteSparse_long*)j,k) 33d755ee67SBarry Smith #define umfpack_UMF_numeric(a,b,c,d,e,f,g) umfpack_dl_numeric((SuiteSparse_long*)a,(SuiteSparse_long*)b,c,d,e,f,g) 348592901bSBarry Smith #define umfpack_UMF_report_numeric umfpack_dl_report_numeric 358592901bSBarry Smith #define umfpack_UMF_report_control umfpack_dl_report_control 368592901bSBarry Smith #define umfpack_UMF_report_status umfpack_dl_report_status 378592901bSBarry Smith #define umfpack_UMF_report_info umfpack_dl_report_info 388592901bSBarry Smith #define umfpack_UMF_report_symbolic umfpack_dl_report_symbolic 39d755ee67SBarry Smith #define umfpack_UMF_qsymbolic(a,b,c,d,e,f,g,h,i) umfpack_dl_qsymbolic(a,b,(SuiteSparse_long*)c,(SuiteSparse_long*)d,e,(SuiteSparse_long*)f,g,h,i) 40d755ee67SBarry Smith #define umfpack_UMF_symbolic(a,b,c,d,e,f,g,h) umfpack_dl_symbolic(a,b,(SuiteSparse_long*)c,(SuiteSparse_long*)d,e,f,g,h) 418592901bSBarry Smith #define umfpack_UMF_defaults umfpack_dl_defaults 428592901bSBarry Smith #endif 438592901bSBarry Smith 448592901bSBarry Smith #else 458592901bSBarry Smith #if defined(PETSC_USE_COMPLEX) 468592901bSBarry Smith #define umfpack_UMF_free_symbolic umfpack_zi_free_symbolic 478592901bSBarry Smith #define umfpack_UMF_free_numeric umfpack_zi_free_numeric 488592901bSBarry Smith #define umfpack_UMF_wsolve umfpack_zi_wsolve 498592901bSBarry Smith #define umfpack_UMF_numeric umfpack_zi_numeric 508592901bSBarry Smith #define umfpack_UMF_report_numeric umfpack_zi_report_numeric 518592901bSBarry Smith #define umfpack_UMF_report_control umfpack_zi_report_control 528592901bSBarry Smith #define umfpack_UMF_report_status umfpack_zi_report_status 538592901bSBarry Smith #define umfpack_UMF_report_info umfpack_zi_report_info 548592901bSBarry Smith #define umfpack_UMF_report_symbolic umfpack_zi_report_symbolic 558592901bSBarry Smith #define umfpack_UMF_qsymbolic umfpack_zi_qsymbolic 568592901bSBarry Smith #define umfpack_UMF_symbolic umfpack_zi_symbolic 578592901bSBarry Smith #define umfpack_UMF_defaults umfpack_zi_defaults 588592901bSBarry Smith 598592901bSBarry Smith #else 608592901bSBarry Smith #define umfpack_UMF_free_symbolic umfpack_di_free_symbolic 618592901bSBarry Smith #define umfpack_UMF_free_numeric umfpack_di_free_numeric 628592901bSBarry Smith #define umfpack_UMF_wsolve umfpack_di_wsolve 638592901bSBarry Smith #define umfpack_UMF_numeric umfpack_di_numeric 648592901bSBarry Smith #define umfpack_UMF_report_numeric umfpack_di_report_numeric 658592901bSBarry Smith #define umfpack_UMF_report_control umfpack_di_report_control 668592901bSBarry Smith #define umfpack_UMF_report_status umfpack_di_report_status 678592901bSBarry Smith #define umfpack_UMF_report_info umfpack_di_report_info 688592901bSBarry Smith #define umfpack_UMF_report_symbolic umfpack_di_report_symbolic 698592901bSBarry Smith #define umfpack_UMF_qsymbolic umfpack_di_qsymbolic 708592901bSBarry Smith #define umfpack_UMF_symbolic umfpack_di_symbolic 718592901bSBarry Smith #define umfpack_UMF_defaults umfpack_di_defaults 728592901bSBarry Smith #endif 738592901bSBarry Smith #endif 748592901bSBarry Smith 751677d0b8SKris Buschelman EXTERN_C_BEGIN 76c6db04a5SJed Brown #include <umfpack.h> 771677d0b8SKris Buschelman EXTERN_C_END 781677d0b8SKris Buschelman 79fcfd50ebSBarry Smith static const char *const UmfpackOrderingTypes[] = {"CHOLMOD","AMD","GIVEN","METIS","BEST","NONE","USER","UmfpackOrderingTypes","UMFPACK_ORDERING_",0}; 80fcfd50ebSBarry Smith 811677d0b8SKris Buschelman typedef struct { 821677d0b8SKris Buschelman void *Symbolic, *Numeric; 831677d0b8SKris Buschelman double Info[UMFPACK_INFO], Control[UMFPACK_CONTROL],*W; 84ae26a541SJed Brown PetscInt *Wi,*perm_c; 85ae26a541SJed Brown Mat A; /* Matrix used for factorization */ 861677d0b8SKris Buschelman MatStructure flg; 871677d0b8SKris Buschelman 881677d0b8SKris Buschelman /* Flag to clean up UMFPACK objects during Destroy */ 89ace3abfcSBarry Smith PetscBool CleanUpUMFPACK; 90f0c56d0fSKris Buschelman } Mat_UMFPACK; 91f0c56d0fSKris Buschelman 924b019bd2SJed Brown static PetscErrorCode MatDestroy_UMFPACK(Mat A) 93dfbe8321SBarry Smith { 94dfbe8321SBarry Smith PetscErrorCode ierr; 95b9c12af5SBarry Smith Mat_UMFPACK *lu=(Mat_UMFPACK*)A->data; 961677d0b8SKris Buschelman 971677d0b8SKris Buschelman PetscFunctionBegin; 98b9c12af5SBarry Smith if (lu->CleanUpUMFPACK) { 998592901bSBarry Smith umfpack_UMF_free_symbolic(&lu->Symbolic); 1008592901bSBarry Smith umfpack_UMF_free_numeric(&lu->Numeric); 1011677d0b8SKris Buschelman ierr = PetscFree(lu->Wi);CHKERRQ(ierr); 1021677d0b8SKris Buschelman ierr = PetscFree(lu->W);CHKERRQ(ierr); 1031677d0b8SKris Buschelman ierr = PetscFree(lu->perm_c);CHKERRQ(ierr); 1041677d0b8SKris Buschelman } 105ae26a541SJed Brown ierr = MatDestroy(&lu->A);CHKERRQ(ierr); 106b9c12af5SBarry Smith ierr = PetscFree(A->data);CHKERRQ(ierr); 1071677d0b8SKris Buschelman PetscFunctionReturn(0); 1081677d0b8SKris Buschelman } 1091677d0b8SKris Buschelman 1104b019bd2SJed Brown static PetscErrorCode MatSolve_UMFPACK_Private(Mat A,Vec b,Vec x,int uflag) 1116849ba73SBarry Smith { 112b9c12af5SBarry Smith Mat_UMFPACK *lu = (Mat_UMFPACK*)A->data; 113ae26a541SJed Brown Mat_SeqAIJ *a = (Mat_SeqAIJ*)lu->A->data; 114d9ca1df4SBarry Smith PetscScalar *av = a->a,*xa; 115d9ca1df4SBarry Smith const PetscScalar *ba; 116dfbe8321SBarry Smith PetscErrorCode ierr; 117ae26a541SJed Brown PetscInt *ai = a->i,*aj = a->j,status; 118fcf6e9abSJed Brown static PetscBool cite = PETSC_FALSE; 1191677d0b8SKris Buschelman 1201677d0b8SKris Buschelman PetscFunctionBegin; 121a643c07aSBarry Smith if (!A->rmap->n) PetscFunctionReturn(0); 122fcf6e9abSJed Brown ierr = PetscCitationsRegister("@article{davis2004algorithm,\n title={Algorithm 832: {UMFPACK} V4.3---An Unsymmetric-Pattern Multifrontal Method},\n author={Davis, Timothy A},\n journal={ACM Transactions on Mathematical Software (TOMS)},\n volume={30},\n number={2},\n pages={196--199},\n year={2004},\n publisher={ACM}\n}\n",&cite);CHKERRQ(ierr); 1232d4e2982SHong Zhang /* solve Ax = b by umfpack_*_wsolve */ 1241677d0b8SKris Buschelman /* ----------------------------------*/ 1252d4e2982SHong Zhang 126ae26a541SJed Brown if (!lu->Wi) { /* first time, allocate working space for wsolve */ 127785e854fSJed Brown ierr = PetscMalloc1(A->rmap->n,&lu->Wi);CHKERRQ(ierr); 128785e854fSJed Brown ierr = PetscMalloc1(5*A->rmap->n,&lu->W);CHKERRQ(ierr); 129ae26a541SJed Brown } 130ae26a541SJed Brown 1311e1ea65dSPierre Jolivet ierr = VecGetArrayRead(b,&ba);CHKERRQ(ierr); 1321e1ea65dSPierre Jolivet ierr = VecGetArray(x,&xa);CHKERRQ(ierr); 13379c34000SHong Zhang #if defined(PETSC_USE_COMPLEX) 134b0043f70SBarry Smith status = umfpack_UMF_wsolve(uflag,ai,aj,(PetscReal*)av,NULL,(PetscReal*)xa,NULL,(PetscReal*)ba,NULL,lu->Numeric,lu->Control,lu->Info,lu->Wi,lu->W); 13579c34000SHong Zhang #else 1364b019bd2SJed Brown status = umfpack_UMF_wsolve(uflag,ai,aj,av,xa,ba,lu->Numeric,lu->Control,lu->Info,lu->Wi,lu->W); 13779c34000SHong Zhang #endif 1388592901bSBarry Smith umfpack_UMF_report_info(lu->Control, lu->Info); 1391677d0b8SKris Buschelman if (status < 0) { 1408592901bSBarry Smith umfpack_UMF_report_status(lu->Control, status); 141e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"umfpack_UMF_wsolve failed"); 1421677d0b8SKris Buschelman } 1431677d0b8SKris Buschelman 144d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(b,&ba);CHKERRQ(ierr); 145057dcbc9SJed Brown ierr = VecRestoreArray(x,&xa);CHKERRQ(ierr); 1464b019bd2SJed Brown PetscFunctionReturn(0); 1474b019bd2SJed Brown } 1482a325a84SHong Zhang 1494b019bd2SJed Brown static PetscErrorCode MatSolve_UMFPACK(Mat A,Vec b,Vec x) 1504b019bd2SJed Brown { 1514b019bd2SJed Brown PetscErrorCode ierr; 1524b019bd2SJed Brown 1534b019bd2SJed Brown PetscFunctionBegin; 1544b019bd2SJed Brown /* We gave UMFPACK the algebraic transpose (because it assumes column alignment) */ 1554b019bd2SJed Brown ierr = MatSolve_UMFPACK_Private(A,b,x,UMFPACK_Aat);CHKERRQ(ierr); 1564b019bd2SJed Brown PetscFunctionReturn(0); 1574b019bd2SJed Brown } 1584b019bd2SJed Brown 1594b019bd2SJed Brown static PetscErrorCode MatSolveTranspose_UMFPACK(Mat A,Vec b,Vec x) 1604b019bd2SJed Brown { 1614b019bd2SJed Brown PetscErrorCode ierr; 1624b019bd2SJed Brown 1634b019bd2SJed Brown PetscFunctionBegin; 1644b019bd2SJed Brown /* We gave UMFPACK the algebraic transpose (because it assumes column alignment) */ 1654b019bd2SJed Brown ierr = MatSolve_UMFPACK_Private(A,b,x,UMFPACK_A);CHKERRQ(ierr); 1661677d0b8SKris Buschelman PetscFunctionReturn(0); 1671677d0b8SKris Buschelman } 1681677d0b8SKris Buschelman 1694b019bd2SJed Brown static PetscErrorCode MatLUFactorNumeric_UMFPACK(Mat F,Mat A,const MatFactorInfo *info) 1706849ba73SBarry Smith { 171b9c12af5SBarry Smith Mat_UMFPACK *lu = (Mat_UMFPACK*)(F)->data; 172ae26a541SJed Brown Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 173ae26a541SJed Brown PetscInt *ai = a->i,*aj=a->j,status; 174ae26a541SJed Brown PetscScalar *av = a->a; 1756849ba73SBarry Smith PetscErrorCode ierr; 1761677d0b8SKris Buschelman 1771677d0b8SKris Buschelman PetscFunctionBegin; 178a643c07aSBarry Smith if (!A->rmap->n) PetscFunctionReturn(0); 1791677d0b8SKris Buschelman /* numeric factorization of A' */ 1801677d0b8SKris Buschelman /* ----------------------------*/ 1812d4e2982SHong Zhang 1828592901bSBarry Smith if (lu->flg == SAME_NONZERO_PATTERN && lu->Numeric) { 1838592901bSBarry Smith umfpack_UMF_free_numeric(&lu->Numeric); 1848592901bSBarry Smith } 1852d4e2982SHong Zhang #if defined(PETSC_USE_COMPLEX) 1868592901bSBarry Smith status = umfpack_UMF_numeric(ai,aj,(double*)av,NULL,lu->Symbolic,&lu->Numeric,lu->Control,lu->Info); 1872d4e2982SHong Zhang #else 1888592901bSBarry Smith status = umfpack_UMF_numeric(ai,aj,av,lu->Symbolic,&lu->Numeric,lu->Control,lu->Info); 1898592901bSBarry Smith #endif 1909f42a82aSMatthew Knepley if (status < 0) { 1918592901bSBarry Smith umfpack_UMF_report_status(lu->Control, status); 192e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"umfpack_UMF_numeric failed"); 1939f42a82aSMatthew Knepley } 1942d4e2982SHong Zhang /* report numeric factorization of A' when Control[PRL] > 3 */ 1958592901bSBarry Smith (void) umfpack_UMF_report_numeric(lu->Numeric, lu->Control); 1961677d0b8SKris Buschelman 197ae26a541SJed Brown ierr = PetscObjectReference((PetscObject)A);CHKERRQ(ierr); 198ae26a541SJed Brown ierr = MatDestroy(&lu->A);CHKERRQ(ierr); 1992205254eSKarl Rupp 200ae26a541SJed Brown lu->A = A; 2012a325a84SHong Zhang lu->flg = SAME_NONZERO_PATTERN; 2022a325a84SHong Zhang lu->CleanUpUMFPACK = PETSC_TRUE; 2034b019bd2SJed Brown F->ops->solve = MatSolve_UMFPACK; 2044b019bd2SJed Brown F->ops->solvetranspose = MatSolveTranspose_UMFPACK; 2051677d0b8SKris Buschelman PetscFunctionReturn(0); 2061677d0b8SKris Buschelman } 2071677d0b8SKris Buschelman 2084b019bd2SJed Brown static PetscErrorCode MatLUFactorSymbolic_UMFPACK(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 2096849ba73SBarry Smith { 210ae26a541SJed Brown Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 211b9c12af5SBarry Smith Mat_UMFPACK *lu = (Mat_UMFPACK*)(F->data); 212dfbe8321SBarry Smith PetscErrorCode ierr; 213ae26a541SJed Brown PetscInt i,*ai = a->i,*aj = a->j,m=A->rmap->n,n=A->cmap->n; 214989213a4SSatish Balay #if !defined(PETSC_USE_COMPLEX) 215ae26a541SJed Brown PetscScalar *av = a->a; 216989213a4SSatish Balay #endif 2175d0c19d7SBarry Smith const PetscInt *ra; 2188592901bSBarry Smith PetscInt status; 2191677d0b8SKris Buschelman 2201677d0b8SKris Buschelman PetscFunctionBegin; 221a643c07aSBarry Smith (F)->ops->lufactornumeric = MatLUFactorNumeric_UMFPACK; 222a643c07aSBarry Smith if (!n) PetscFunctionReturn(0); 2232c7c0729SBarry Smith if (r) { 2240f6efc10SHong Zhang ierr = ISGetIndices(r,&ra);CHKERRQ(ierr); 225785e854fSJed Brown ierr = PetscMalloc1(m,&lu->perm_c);CHKERRQ(ierr); 2262d4e2982SHong Zhang /* we cannot simply memcpy on 64 bit archs */ 2272d4e2982SHong Zhang for (i = 0; i < m; i++) lu->perm_c[i] = ra[i]; 2280f6efc10SHong Zhang ierr = ISRestoreIndices(r,&ra);CHKERRQ(ierr); 2291677d0b8SKris Buschelman } 2301677d0b8SKris Buschelman 2311677d0b8SKris Buschelman /* print the control parameters */ 2328592901bSBarry Smith if (lu->Control[UMFPACK_PRL] > 1) umfpack_UMF_report_control(lu->Control); 2331677d0b8SKris Buschelman 2341677d0b8SKris Buschelman /* symbolic factorization of A' */ 2351677d0b8SKris Buschelman /* ---------------------------------------------------------------------- */ 2362c7c0729SBarry Smith if (r) { /* use Petsc row ordering */ 2378592901bSBarry Smith #if !defined(PETSC_USE_COMPLEX) 238ae26a541SJed Brown status = umfpack_UMF_qsymbolic(n,m,ai,aj,av,lu->perm_c,&lu->Symbolic,lu->Control,lu->Info); 2392d4e2982SHong Zhang #else 240b0043f70SBarry Smith status = umfpack_UMF_qsymbolic(n,m,ai,aj,NULL,NULL,lu->perm_c,&lu->Symbolic,lu->Control,lu->Info); 2418592901bSBarry Smith #endif 2422d4e2982SHong Zhang } else { /* use Umfpack col ordering */ 2438592901bSBarry Smith #if !defined(PETSC_USE_COMPLEX) 244ae26a541SJed Brown status = umfpack_UMF_symbolic(n,m,ai,aj,av,&lu->Symbolic,lu->Control,lu->Info); 2458592901bSBarry Smith #else 246ae26a541SJed Brown status = umfpack_UMF_symbolic(n,m,ai,aj,NULL,NULL,&lu->Symbolic,lu->Control,lu->Info); 2478592901bSBarry Smith #endif 2482d4e2982SHong Zhang } 2492d4e2982SHong Zhang if (status < 0) { 2508592901bSBarry Smith umfpack_UMF_report_info(lu->Control, lu->Info); 2518592901bSBarry Smith umfpack_UMF_report_status(lu->Control, status); 252e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"umfpack_UMF_symbolic failed"); 2532d4e2982SHong Zhang } 2542d4e2982SHong Zhang /* report sumbolic factorization of A' when Control[PRL] > 3 */ 2558592901bSBarry Smith (void) umfpack_UMF_report_symbolic(lu->Symbolic, lu->Control); 2561677d0b8SKris Buschelman 2571677d0b8SKris Buschelman lu->flg = DIFFERENT_NONZERO_PATTERN; 258e1b4c3a1SKris Buschelman lu->CleanUpUMFPACK = PETSC_TRUE; 2591677d0b8SKris Buschelman PetscFunctionReturn(0); 2601677d0b8SKris Buschelman } 2611677d0b8SKris Buschelman 262860c79edSBarry Smith static PetscErrorCode MatView_Info_UMFPACK(Mat A,PetscViewer viewer) 2636849ba73SBarry Smith { 264b9c12af5SBarry Smith Mat_UMFPACK *lu= (Mat_UMFPACK*)A->data; 265dfbe8321SBarry Smith PetscErrorCode ierr; 266f0c56d0fSKris Buschelman 2671677d0b8SKris Buschelman PetscFunctionBegin; 2681677d0b8SKris Buschelman /* check if matrix is UMFPACK type */ 269f0c56d0fSKris Buschelman if (A->ops->solve != MatSolve_UMFPACK) PetscFunctionReturn(0); 2701677d0b8SKris Buschelman 2711677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer,"UMFPACK run parameters:\n");CHKERRQ(ierr); 2721677d0b8SKris Buschelman /* Control parameters used by reporting routiones */ 2731677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_PRL]: %g\n",lu->Control[UMFPACK_PRL]);CHKERRQ(ierr); 2741677d0b8SKris Buschelman 2751677d0b8SKris Buschelman /* Control parameters used by symbolic factorization */ 2760f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_STRATEGY]: %g\n",lu->Control[UMFPACK_STRATEGY]);CHKERRQ(ierr); 2771677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_DENSE_COL]: %g\n",lu->Control[UMFPACK_DENSE_COL]);CHKERRQ(ierr); 2781677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_DENSE_ROW]: %g\n",lu->Control[UMFPACK_DENSE_ROW]);CHKERRQ(ierr); 2790f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_AMD_DENSE]: %g\n",lu->Control[UMFPACK_AMD_DENSE]);CHKERRQ(ierr); 2801677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_BLOCK_SIZE]: %g\n",lu->Control[UMFPACK_BLOCK_SIZE]);CHKERRQ(ierr); 2810f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_FIXQ]: %g\n",lu->Control[UMFPACK_FIXQ]);CHKERRQ(ierr); 2820f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_AGGRESSIVE]: %g\n",lu->Control[UMFPACK_AGGRESSIVE]);CHKERRQ(ierr); 2831677d0b8SKris Buschelman 2841677d0b8SKris Buschelman /* Control parameters used by numeric factorization */ 2851677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_PIVOT_TOLERANCE]: %g\n",lu->Control[UMFPACK_PIVOT_TOLERANCE]);CHKERRQ(ierr); 2860f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_SYM_PIVOT_TOLERANCE]: %g\n",lu->Control[UMFPACK_SYM_PIVOT_TOLERANCE]);CHKERRQ(ierr); 2870f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_SCALE]: %g\n",lu->Control[UMFPACK_SCALE]);CHKERRQ(ierr); 2881677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_ALLOC_INIT]: %g\n",lu->Control[UMFPACK_ALLOC_INIT]);CHKERRQ(ierr); 2890f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_DROPTOL]: %g\n",lu->Control[UMFPACK_DROPTOL]);CHKERRQ(ierr); 2901677d0b8SKris Buschelman 2911677d0b8SKris Buschelman /* Control parameters used by solve */ 2921677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_IRSTEP]: %g\n",lu->Control[UMFPACK_IRSTEP]);CHKERRQ(ierr); 2931677d0b8SKris Buschelman 2941677d0b8SKris Buschelman /* mat ordering */ 2952c7c0729SBarry Smith if (!lu->perm_c) { 2962c7c0729SBarry Smith ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_ORDERING]: AMD (not using the PETSc ordering)\n",UmfpackOrderingTypes[(int)lu->Control[UMFPACK_ORDERING]]);CHKERRQ(ierr); 297fcfd50ebSBarry Smith } 2981677d0b8SKris Buschelman PetscFunctionReturn(0); 2991677d0b8SKris Buschelman } 3001677d0b8SKris Buschelman 3014b019bd2SJed Brown static PetscErrorCode MatView_UMFPACK(Mat A,PetscViewer viewer) 3026849ba73SBarry Smith { 303dfbe8321SBarry Smith PetscErrorCode ierr; 304ace3abfcSBarry Smith PetscBool iascii; 305d844382dSKris Buschelman PetscViewerFormat format; 306d844382dSKris Buschelman 307d844382dSKris Buschelman PetscFunctionBegin; 308251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 30932077d6dSBarry Smith if (iascii) { 310d844382dSKris Buschelman ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 3112f59403fSHong Zhang if (format == PETSC_VIEWER_ASCII_INFO) { 312860c79edSBarry Smith ierr = MatView_Info_UMFPACK(A,viewer);CHKERRQ(ierr); 313d844382dSKris Buschelman } 314d844382dSKris Buschelman } 315d844382dSKris Buschelman PetscFunctionReturn(0); 316d844382dSKris Buschelman } 317d844382dSKris Buschelman 318ea799195SBarry Smith PetscErrorCode MatFactorGetSolverType_seqaij_umfpack(Mat A,MatSolverType *type) 31935bd34faSBarry Smith { 32035bd34faSBarry Smith PetscFunctionBegin; 3212692d6eeSBarry Smith *type = MATSOLVERUMFPACK; 32235bd34faSBarry Smith PetscFunctionReturn(0); 32335bd34faSBarry Smith } 32435bd34faSBarry Smith 3252f71e704SKris Buschelman /*MC 3262692d6eeSBarry Smith MATSOLVERUMFPACK = "umfpack" - A matrix type providing direct solvers (LU) for sequential matrices 3272f71e704SKris Buschelman via the external package UMFPACK. 3282f71e704SKris Buschelman 329c2b89b5dSBarry Smith Use ./configure --download-suitesparse to install PETSc to use UMFPACK 330c2b89b5dSBarry Smith 3313ca39a21SBarry Smith Use -pc_type lu -pc_factor_mat_solver_type umfpack to use this direct solver 3322f71e704SKris Buschelman 3332f71e704SKris Buschelman Consult UMFPACK documentation for more information about the Control parameters 3342f71e704SKris Buschelman which correspond to the options database keys below. 3352f71e704SKris Buschelman 3362f71e704SKris Buschelman Options Database Keys: 337ba41fbb6SBarry Smith + -mat_umfpack_ordering - CHOLMOD, AMD, GIVEN, METIS, BEST, NONE 338ba41fbb6SBarry Smith . -mat_umfpack_prl - UMFPACK print level: Control[UMFPACK_PRL] 339e08999f5SMatthew G Knepley . -mat_umfpack_strategy <AUTO> - (choose one of) AUTO UNSYMMETRIC SYMMETRIC 2BY2 3402f71e704SKris Buschelman . -mat_umfpack_dense_col <alpha_c> - UMFPACK dense column threshold: Control[UMFPACK_DENSE_COL] 341e08999f5SMatthew G Knepley . -mat_umfpack_dense_row <0.2> - Control[UMFPACK_DENSE_ROW] 342e08999f5SMatthew G Knepley . -mat_umfpack_amd_dense <10> - Control[UMFPACK_AMD_DENSE] 3432f71e704SKris Buschelman . -mat_umfpack_block_size <bs> - UMFPACK block size for BLAS-Level 3 calls: Control[UMFPACK_BLOCK_SIZE] 344e08999f5SMatthew G Knepley . -mat_umfpack_2by2_tolerance <0.01> - Control[UMFPACK_2BY2_TOLERANCE] 345e08999f5SMatthew G Knepley . -mat_umfpack_fixq <0> - Control[UMFPACK_FIXQ] 346e08999f5SMatthew G Knepley . -mat_umfpack_aggressive <1> - Control[UMFPACK_AGGRESSIVE] 3472f71e704SKris Buschelman . -mat_umfpack_pivot_tolerance <delta> - UMFPACK partial pivot tolerance: Control[UMFPACK_PIVOT_TOLERANCE] 348e08999f5SMatthew G Knepley . -mat_umfpack_sym_pivot_tolerance <0.001> - Control[UMFPACK_SYM_PIVOT_TOLERANCE] 349e08999f5SMatthew G Knepley . -mat_umfpack_scale <NONE> - (choose one of) NONE SUM MAX 3502f71e704SKris Buschelman . -mat_umfpack_alloc_init <delta> - UMFPACK factorized matrix allocation modifier: Control[UMFPACK_ALLOC_INIT] 351e08999f5SMatthew G Knepley . -mat_umfpack_droptol <0> - Control[UMFPACK_DROPTOL] 3522f71e704SKris Buschelman - -mat_umfpack_irstep <maxit> - UMFPACK maximum number of iterative refinement steps: Control[UMFPACK_IRSTEP] 3532f71e704SKris Buschelman 3542f71e704SKris Buschelman Level: beginner 355a364b7d2SBarry Smith 356a364b7d2SBarry Smith Note: UMFPACK is part of SuiteSparse http://faculty.cse.tamu.edu/davis/suitesparse.html 3572f71e704SKris Buschelman 3583ca39a21SBarry Smith .seealso: PCLU, MATSOLVERSUPERLU, MATSOLVERMUMPS, PCFactorSetMatSolverType(), MatSolverType 3592f71e704SKris Buschelman M*/ 360b2573a8aSBarry Smith 3618cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatGetFactor_seqaij_umfpack(Mat A,MatFactorType ftype,Mat *F) 3623519fcdcSHong Zhang { 3633519fcdcSHong Zhang Mat B; 3643519fcdcSHong Zhang Mat_UMFPACK *lu; 3653519fcdcSHong Zhang PetscErrorCode ierr; 3668592901bSBarry Smith PetscInt m=A->rmap->n,n=A->cmap->n,idx; 3672205254eSKarl Rupp const char *strategy[]={"AUTO","UNSYMMETRIC","SYMMETRIC"}; 3682205254eSKarl Rupp const char *scale[] ={"NONE","SUM","MAX"}; 369ace3abfcSBarry Smith PetscBool flg; 3702d4e2982SHong Zhang 3713519fcdcSHong Zhang PetscFunctionBegin; 3723519fcdcSHong Zhang /* Create the factorization matrix F */ 373ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 3743519fcdcSHong Zhang ierr = MatSetSizes(B,PETSC_DECIDE,PETSC_DECIDE,m,n);CHKERRQ(ierr); 375b9c12af5SBarry Smith ierr = PetscStrallocpy("umfpack",&((PetscObject)B)->type_name);CHKERRQ(ierr); 376b9c12af5SBarry Smith ierr = MatSetUp(B);CHKERRQ(ierr); 377b9c12af5SBarry Smith 378b00a9115SJed Brown ierr = PetscNewLog(B,&lu);CHKERRQ(ierr); 3792205254eSKarl Rupp 380b9c12af5SBarry Smith B->data = lu; 381b9c12af5SBarry Smith B->ops->getinfo = MatGetInfo_External; 3823519fcdcSHong Zhang B->ops->lufactorsymbolic = MatLUFactorSymbolic_UMFPACK; 3833519fcdcSHong Zhang B->ops->destroy = MatDestroy_UMFPACK; 3843519fcdcSHong Zhang B->ops->view = MatView_UMFPACK; 3851aef8b4cSStefano Zampini B->ops->matsolve = NULL; 3862205254eSKarl Rupp 3873ca39a21SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverType_C",MatFactorGetSolverType_seqaij_umfpack);CHKERRQ(ierr); 3882205254eSKarl Rupp 389d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 3903519fcdcSHong Zhang B->assembled = PETSC_TRUE; /* required by -ksp_view */ 3913519fcdcSHong Zhang B->preallocated = PETSC_TRUE; 3923519fcdcSHong Zhang 39300c67f3bSHong Zhang ierr = PetscFree(B->solvertype);CHKERRQ(ierr); 39400c67f3bSHong Zhang ierr = PetscStrallocpy(MATSOLVERUMFPACK,&B->solvertype);CHKERRQ(ierr); 395f73b0415SBarry Smith B->canuseordering = PETSC_TRUE; 3964ac6704cSBarry Smith ierr = PetscStrallocpy(MATORDERINGEXTERNAL,(char**)&B->preferredordering[MAT_FACTOR_LU]);CHKERRQ(ierr); 39700c67f3bSHong Zhang 3983519fcdcSHong Zhang /* initializations */ 3993519fcdcSHong Zhang /* ------------------------------------------------*/ 4003519fcdcSHong Zhang /* get the default control parameters */ 4018592901bSBarry Smith umfpack_UMF_defaults(lu->Control); 4020298fd71SBarry Smith lu->perm_c = NULL; /* use defaul UMFPACK col permutation */ 4033519fcdcSHong Zhang lu->Control[UMFPACK_IRSTEP] = 0; /* max num of iterative refinement steps to attempt */ 4043519fcdcSHong Zhang 405ce94432eSBarry Smith ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"UMFPACK Options","Mat");CHKERRQ(ierr); 4063519fcdcSHong Zhang /* Control parameters used by reporting routiones */ 4070298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_prl","Control[UMFPACK_PRL]","None",lu->Control[UMFPACK_PRL],&lu->Control[UMFPACK_PRL],NULL);CHKERRQ(ierr); 4083519fcdcSHong Zhang 4093519fcdcSHong Zhang /* Control parameters for symbolic factorization */ 410fcfd50ebSBarry Smith ierr = PetscOptionsEList("-mat_umfpack_strategy","ordering and pivoting strategy","None",strategy,3,strategy[0],&idx,&flg);CHKERRQ(ierr); 4113519fcdcSHong Zhang if (flg) { 4123519fcdcSHong Zhang switch (idx) { 4133519fcdcSHong Zhang case 0: lu->Control[UMFPACK_STRATEGY] = UMFPACK_STRATEGY_AUTO; break; 4143519fcdcSHong Zhang case 1: lu->Control[UMFPACK_STRATEGY] = UMFPACK_STRATEGY_UNSYMMETRIC; break; 4153519fcdcSHong Zhang case 2: lu->Control[UMFPACK_STRATEGY] = UMFPACK_STRATEGY_SYMMETRIC; break; 4163519fcdcSHong Zhang } 4173519fcdcSHong Zhang } 4188caf3d72SBarry Smith ierr = PetscOptionsEList("-mat_umfpack_ordering","Internal ordering method","None",UmfpackOrderingTypes,sizeof(UmfpackOrderingTypes)/sizeof(UmfpackOrderingTypes[0]),UmfpackOrderingTypes[(int)lu->Control[UMFPACK_ORDERING]],&idx,&flg);CHKERRQ(ierr); 419fcfd50ebSBarry Smith if (flg) lu->Control[UMFPACK_ORDERING] = (int)idx; 4200298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_dense_col","Control[UMFPACK_DENSE_COL]","None",lu->Control[UMFPACK_DENSE_COL],&lu->Control[UMFPACK_DENSE_COL],NULL);CHKERRQ(ierr); 4210298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_dense_row","Control[UMFPACK_DENSE_ROW]","None",lu->Control[UMFPACK_DENSE_ROW],&lu->Control[UMFPACK_DENSE_ROW],NULL);CHKERRQ(ierr); 4220298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_amd_dense","Control[UMFPACK_AMD_DENSE]","None",lu->Control[UMFPACK_AMD_DENSE],&lu->Control[UMFPACK_AMD_DENSE],NULL);CHKERRQ(ierr); 4230298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_block_size","Control[UMFPACK_BLOCK_SIZE]","None",lu->Control[UMFPACK_BLOCK_SIZE],&lu->Control[UMFPACK_BLOCK_SIZE],NULL);CHKERRQ(ierr); 4240298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_fixq","Control[UMFPACK_FIXQ]","None",lu->Control[UMFPACK_FIXQ],&lu->Control[UMFPACK_FIXQ],NULL);CHKERRQ(ierr); 4250298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_aggressive","Control[UMFPACK_AGGRESSIVE]","None",lu->Control[UMFPACK_AGGRESSIVE],&lu->Control[UMFPACK_AGGRESSIVE],NULL);CHKERRQ(ierr); 4263519fcdcSHong Zhang 4273519fcdcSHong Zhang /* Control parameters used by numeric factorization */ 4280298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_pivot_tolerance","Control[UMFPACK_PIVOT_TOLERANCE]","None",lu->Control[UMFPACK_PIVOT_TOLERANCE],&lu->Control[UMFPACK_PIVOT_TOLERANCE],NULL);CHKERRQ(ierr); 4290298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_sym_pivot_tolerance","Control[UMFPACK_SYM_PIVOT_TOLERANCE]","None",lu->Control[UMFPACK_SYM_PIVOT_TOLERANCE],&lu->Control[UMFPACK_SYM_PIVOT_TOLERANCE],NULL);CHKERRQ(ierr); 4303519fcdcSHong Zhang ierr = PetscOptionsEList("-mat_umfpack_scale","Control[UMFPACK_SCALE]","None",scale,3,scale[0],&idx,&flg);CHKERRQ(ierr); 4313519fcdcSHong Zhang if (flg) { 4323519fcdcSHong Zhang switch (idx) { 4333519fcdcSHong Zhang case 0: lu->Control[UMFPACK_SCALE] = UMFPACK_SCALE_NONE; break; 4343519fcdcSHong Zhang case 1: lu->Control[UMFPACK_SCALE] = UMFPACK_SCALE_SUM; break; 4353519fcdcSHong Zhang case 2: lu->Control[UMFPACK_SCALE] = UMFPACK_SCALE_MAX; break; 4363519fcdcSHong Zhang } 4373519fcdcSHong Zhang } 4380298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_alloc_init","Control[UMFPACK_ALLOC_INIT]","None",lu->Control[UMFPACK_ALLOC_INIT],&lu->Control[UMFPACK_ALLOC_INIT],NULL);CHKERRQ(ierr); 4390298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_front_alloc_init","Control[UMFPACK_FRONT_ALLOC_INIT]","None",lu->Control[UMFPACK_FRONT_ALLOC_INIT],&lu->Control[UMFPACK_ALLOC_INIT],NULL);CHKERRQ(ierr); 4400298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_droptol","Control[UMFPACK_DROPTOL]","None",lu->Control[UMFPACK_DROPTOL],&lu->Control[UMFPACK_DROPTOL],NULL);CHKERRQ(ierr); 4413519fcdcSHong Zhang 4423519fcdcSHong Zhang /* Control parameters used by solve */ 4430298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_irstep","Control[UMFPACK_IRSTEP]","None",lu->Control[UMFPACK_IRSTEP],&lu->Control[UMFPACK_IRSTEP],NULL);CHKERRQ(ierr); 4443519fcdcSHong Zhang PetscOptionsEnd(); 4453519fcdcSHong Zhang *F = B; 4463519fcdcSHong Zhang PetscFunctionReturn(0); 4473519fcdcSHong Zhang } 448b2573a8aSBarry Smith 449db87b0f2SBarry Smith PETSC_INTERN PetscErrorCode MatGetFactor_seqaij_cholmod(Mat,MatFactorType,Mat*); 450db87b0f2SBarry Smith PETSC_INTERN PetscErrorCode MatGetFactor_seqsbaij_cholmod(Mat,MatFactorType,Mat*); 451db87b0f2SBarry Smith PETSC_INTERN PetscErrorCode MatGetFactor_seqaij_klu(Mat,MatFactorType,Mat*); 452a2fc1e05SToby Isaac PETSC_INTERN PetscErrorCode MatGetFactor_seqaij_spqr(Mat,MatFactorType,Mat*); 4532d4e2982SHong Zhang 4543ca39a21SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverTypeRegister_SuiteSparse(void) 45542c9c57cSBarry Smith { 45642c9c57cSBarry Smith PetscErrorCode ierr; 45742c9c57cSBarry Smith 45842c9c57cSBarry Smith PetscFunctionBegin; 4593ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERUMFPACK,MATSEQAIJ, MAT_FACTOR_LU,MatGetFactor_seqaij_umfpack);CHKERRQ(ierr); 4603ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCHOLMOD,MATSEQAIJ, MAT_FACTOR_CHOLESKY,MatGetFactor_seqaij_cholmod);CHKERRQ(ierr); 4613ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERCHOLMOD,MATSEQSBAIJ,MAT_FACTOR_CHOLESKY,MatGetFactor_seqsbaij_cholmod);CHKERRQ(ierr); 4623ca39a21SBarry Smith ierr = MatSolverTypeRegister(MATSOLVERKLU,MATSEQAIJ, MAT_FACTOR_LU,MatGetFactor_seqaij_klu);CHKERRQ(ierr); 463a2fc1e05SToby Isaac ierr = MatSolverTypeRegister(MATSOLVERSPQR,MATSEQAIJ, MAT_FACTOR_QR,MatGetFactor_seqaij_spqr);CHKERRQ(ierr); 464*65f45395SPierre Jolivet if (!PetscDefined(USE_COMPLEX)) { 46502ef7dfaSPierre Jolivet ierr = MatSolverTypeRegister(MATSOLVERSPQR,MATNORMAL, MAT_FACTOR_QR,MatGetFactor_seqaij_spqr);CHKERRQ(ierr); 466*65f45395SPierre Jolivet } 467*65f45395SPierre Jolivet ierr = MatSolverTypeRegister(MATSOLVERSPQR,MATNORMALHERMITIAN, MAT_FACTOR_QR,MatGetFactor_seqaij_spqr);CHKERRQ(ierr); 46842c9c57cSBarry Smith PetscFunctionReturn(0); 46942c9c57cSBarry Smith } 470