11677d0b8SKris Buschelman 21677d0b8SKris Buschelman /* 3d515b9b4SShri Abhyankar Provides an interface to the UMFPACK sparse solver available through SuiteSparse version 4.2.1 42d4e2982SHong Zhang 5*9e475b0dSSatish Balay When build with PETSC_USE_64BIT_INDICES this will use Suitesparse_long as the 68592901bSBarry Smith integer type in UMFPACK, otherwise it will use int. This means 78592901bSBarry Smith all integers in this file as simply declared as PetscInt. Also it means 8*9e475b0dSSatish Balay that one cannot use 64BIT_INDICES on 32bit machines [as Suitesparse_long is 32bit only] 92d4e2982SHong Zhang 101677d0b8SKris Buschelman */ 11c6db04a5SJed Brown #include <../src/mat/impls/aij/seq/aij.h> 121677d0b8SKris Buschelman 138592901bSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 148592901bSBarry Smith #if defined(PETSC_USE_COMPLEX) 158592901bSBarry Smith #define umfpack_UMF_free_symbolic umfpack_zl_free_symbolic 168592901bSBarry Smith #define umfpack_UMF_free_numeric umfpack_zl_free_numeric 178592901bSBarry Smith #define umfpack_UMF_wsolve umfpack_zl_wsolve 188592901bSBarry Smith #define umfpack_UMF_numeric umfpack_zl_numeric 198592901bSBarry Smith #define umfpack_UMF_report_numeric umfpack_zl_report_numeric 208592901bSBarry Smith #define umfpack_UMF_report_control umfpack_zl_report_control 218592901bSBarry Smith #define umfpack_UMF_report_status umfpack_zl_report_status 228592901bSBarry Smith #define umfpack_UMF_report_info umfpack_zl_report_info 238592901bSBarry Smith #define umfpack_UMF_report_symbolic umfpack_zl_report_symbolic 248592901bSBarry Smith #define umfpack_UMF_qsymbolic umfpack_zl_qsymbolic 258592901bSBarry Smith #define umfpack_UMF_symbolic umfpack_zl_symbolic 268592901bSBarry Smith #define umfpack_UMF_defaults umfpack_zl_defaults 278592901bSBarry Smith 288592901bSBarry Smith #else 298592901bSBarry Smith #define umfpack_UMF_free_symbolic umfpack_dl_free_symbolic 308592901bSBarry Smith #define umfpack_UMF_free_numeric umfpack_dl_free_numeric 318592901bSBarry Smith #define umfpack_UMF_wsolve umfpack_dl_wsolve 328592901bSBarry Smith #define umfpack_UMF_numeric umfpack_dl_numeric 338592901bSBarry Smith #define umfpack_UMF_report_numeric umfpack_dl_report_numeric 348592901bSBarry Smith #define umfpack_UMF_report_control umfpack_dl_report_control 358592901bSBarry Smith #define umfpack_UMF_report_status umfpack_dl_report_status 368592901bSBarry Smith #define umfpack_UMF_report_info umfpack_dl_report_info 378592901bSBarry Smith #define umfpack_UMF_report_symbolic umfpack_dl_report_symbolic 388592901bSBarry Smith #define umfpack_UMF_qsymbolic umfpack_dl_qsymbolic 398592901bSBarry Smith #define umfpack_UMF_symbolic umfpack_dl_symbolic 408592901bSBarry Smith #define umfpack_UMF_defaults umfpack_dl_defaults 418592901bSBarry Smith #endif 428592901bSBarry Smith 438592901bSBarry Smith #else 448592901bSBarry Smith #if defined(PETSC_USE_COMPLEX) 458592901bSBarry Smith #define umfpack_UMF_free_symbolic umfpack_zi_free_symbolic 468592901bSBarry Smith #define umfpack_UMF_free_numeric umfpack_zi_free_numeric 478592901bSBarry Smith #define umfpack_UMF_wsolve umfpack_zi_wsolve 488592901bSBarry Smith #define umfpack_UMF_numeric umfpack_zi_numeric 498592901bSBarry Smith #define umfpack_UMF_report_numeric umfpack_zi_report_numeric 508592901bSBarry Smith #define umfpack_UMF_report_control umfpack_zi_report_control 518592901bSBarry Smith #define umfpack_UMF_report_status umfpack_zi_report_status 528592901bSBarry Smith #define umfpack_UMF_report_info umfpack_zi_report_info 538592901bSBarry Smith #define umfpack_UMF_report_symbolic umfpack_zi_report_symbolic 548592901bSBarry Smith #define umfpack_UMF_qsymbolic umfpack_zi_qsymbolic 558592901bSBarry Smith #define umfpack_UMF_symbolic umfpack_zi_symbolic 568592901bSBarry Smith #define umfpack_UMF_defaults umfpack_zi_defaults 578592901bSBarry Smith 588592901bSBarry Smith #else 598592901bSBarry Smith #define umfpack_UMF_free_symbolic umfpack_di_free_symbolic 608592901bSBarry Smith #define umfpack_UMF_free_numeric umfpack_di_free_numeric 618592901bSBarry Smith #define umfpack_UMF_wsolve umfpack_di_wsolve 628592901bSBarry Smith #define umfpack_UMF_numeric umfpack_di_numeric 638592901bSBarry Smith #define umfpack_UMF_report_numeric umfpack_di_report_numeric 648592901bSBarry Smith #define umfpack_UMF_report_control umfpack_di_report_control 658592901bSBarry Smith #define umfpack_UMF_report_status umfpack_di_report_status 668592901bSBarry Smith #define umfpack_UMF_report_info umfpack_di_report_info 678592901bSBarry Smith #define umfpack_UMF_report_symbolic umfpack_di_report_symbolic 688592901bSBarry Smith #define umfpack_UMF_qsymbolic umfpack_di_qsymbolic 698592901bSBarry Smith #define umfpack_UMF_symbolic umfpack_di_symbolic 708592901bSBarry Smith #define umfpack_UMF_defaults umfpack_di_defaults 718592901bSBarry Smith #endif 728592901bSBarry Smith #endif 738592901bSBarry Smith 741677d0b8SKris Buschelman EXTERN_C_BEGIN 75c6db04a5SJed Brown #include <umfpack.h> 761677d0b8SKris Buschelman EXTERN_C_END 771677d0b8SKris Buschelman 78fcfd50ebSBarry Smith static const char *const UmfpackOrderingTypes[] = {"CHOLMOD","AMD","GIVEN","METIS","BEST","NONE","USER","UmfpackOrderingTypes","UMFPACK_ORDERING_",0}; 79fcfd50ebSBarry Smith 801677d0b8SKris Buschelman typedef struct { 811677d0b8SKris Buschelman void *Symbolic, *Numeric; 821677d0b8SKris Buschelman double Info[UMFPACK_INFO], Control[UMFPACK_CONTROL],*W; 83ae26a541SJed Brown PetscInt *Wi,*perm_c; 84ae26a541SJed Brown Mat A; /* Matrix used for factorization */ 851677d0b8SKris Buschelman MatStructure flg; 86fcfd50ebSBarry Smith PetscBool PetscMatOrdering; 871677d0b8SKris Buschelman 881677d0b8SKris Buschelman /* Flag to clean up UMFPACK objects during Destroy */ 89ace3abfcSBarry Smith PetscBool CleanUpUMFPACK; 90f0c56d0fSKris Buschelman } Mat_UMFPACK; 91f0c56d0fSKris Buschelman 921677d0b8SKris Buschelman #undef __FUNCT__ 93f0c56d0fSKris Buschelman #define __FUNCT__ "MatDestroy_UMFPACK" 944b019bd2SJed Brown static PetscErrorCode MatDestroy_UMFPACK(Mat A) 95dfbe8321SBarry Smith { 96dfbe8321SBarry Smith PetscErrorCode ierr; 97f0c56d0fSKris Buschelman Mat_UMFPACK *lu=(Mat_UMFPACK*)A->spptr; 981677d0b8SKris Buschelman 991677d0b8SKris Buschelman PetscFunctionBegin; 100bf0cc555SLisandro Dalcin if (lu && lu->CleanUpUMFPACK) { 1018592901bSBarry Smith umfpack_UMF_free_symbolic(&lu->Symbolic); 1028592901bSBarry Smith umfpack_UMF_free_numeric(&lu->Numeric); 1031677d0b8SKris Buschelman ierr = PetscFree(lu->Wi);CHKERRQ(ierr); 1041677d0b8SKris Buschelman ierr = PetscFree(lu->W);CHKERRQ(ierr); 1051677d0b8SKris Buschelman ierr = PetscFree(lu->perm_c);CHKERRQ(ierr); 1061677d0b8SKris Buschelman } 107ae26a541SJed Brown ierr = MatDestroy(&lu->A);CHKERRQ(ierr); 108da0e1c47SShri Abhyankar ierr = PetscFree(A->spptr);CHKERRQ(ierr); 109b24902e0SBarry Smith ierr = MatDestroy_SeqAIJ(A);CHKERRQ(ierr); 1101677d0b8SKris Buschelman PetscFunctionReturn(0); 1111677d0b8SKris Buschelman } 1121677d0b8SKris Buschelman 1131677d0b8SKris Buschelman #undef __FUNCT__ 1144b019bd2SJed Brown #define __FUNCT__ "MatSolve_UMFPACK_Private" 1154b019bd2SJed Brown static PetscErrorCode MatSolve_UMFPACK_Private(Mat A,Vec b,Vec x,int uflag) 1166849ba73SBarry Smith { 117f0c56d0fSKris Buschelman Mat_UMFPACK *lu = (Mat_UMFPACK*)A->spptr; 118ae26a541SJed Brown Mat_SeqAIJ *a = (Mat_SeqAIJ*)lu->A->data; 119d9ca1df4SBarry Smith PetscScalar *av = a->a,*xa; 120d9ca1df4SBarry Smith const PetscScalar *ba; 121dfbe8321SBarry Smith PetscErrorCode ierr; 122ae26a541SJed Brown PetscInt *ai = a->i,*aj = a->j,status; 1231677d0b8SKris Buschelman 1241677d0b8SKris Buschelman PetscFunctionBegin; 1252d4e2982SHong Zhang /* solve Ax = b by umfpack_*_wsolve */ 1261677d0b8SKris Buschelman /* ----------------------------------*/ 1272d4e2982SHong Zhang 128ae26a541SJed Brown if (!lu->Wi) { /* first time, allocate working space for wsolve */ 129785e854fSJed Brown ierr = PetscMalloc1(A->rmap->n,&lu->Wi);CHKERRQ(ierr); 130785e854fSJed Brown ierr = PetscMalloc1(5*A->rmap->n,&lu->W);CHKERRQ(ierr); 131ae26a541SJed Brown } 132ae26a541SJed Brown 133d9ca1df4SBarry Smith ierr = VecGetArrayRead(b,&ba); 1341677d0b8SKris Buschelman ierr = VecGetArray(x,&xa); 13579c34000SHong Zhang #if defined(PETSC_USE_COMPLEX) 136b0043f70SBarry Smith status = umfpack_UMF_wsolve(uflag,ai,aj,(PetscReal*)av,NULL,(PetscReal*)xa,NULL,(PetscReal*)ba,NULL,lu->Numeric,lu->Control,lu->Info,lu->Wi,lu->W); 13779c34000SHong Zhang #else 1384b019bd2SJed Brown status = umfpack_UMF_wsolve(uflag,ai,aj,av,xa,ba,lu->Numeric,lu->Control,lu->Info,lu->Wi,lu->W); 13979c34000SHong Zhang #endif 1408592901bSBarry Smith umfpack_UMF_report_info(lu->Control, lu->Info); 1411677d0b8SKris Buschelman if (status < 0) { 1428592901bSBarry Smith umfpack_UMF_report_status(lu->Control, status); 143e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"umfpack_UMF_wsolve failed"); 1441677d0b8SKris Buschelman } 1451677d0b8SKris Buschelman 146d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(b,&ba);CHKERRQ(ierr); 147057dcbc9SJed Brown ierr = VecRestoreArray(x,&xa);CHKERRQ(ierr); 1484b019bd2SJed Brown PetscFunctionReturn(0); 1494b019bd2SJed Brown } 1502a325a84SHong Zhang 1514b019bd2SJed Brown #undef __FUNCT__ 1524b019bd2SJed Brown #define __FUNCT__ "MatSolve_UMFPACK" 1534b019bd2SJed Brown static PetscErrorCode MatSolve_UMFPACK(Mat A,Vec b,Vec x) 1544b019bd2SJed Brown { 1554b019bd2SJed Brown PetscErrorCode ierr; 1564b019bd2SJed Brown 1574b019bd2SJed Brown PetscFunctionBegin; 1584b019bd2SJed Brown /* We gave UMFPACK the algebraic transpose (because it assumes column alignment) */ 1594b019bd2SJed Brown ierr = MatSolve_UMFPACK_Private(A,b,x,UMFPACK_Aat);CHKERRQ(ierr); 1604b019bd2SJed Brown PetscFunctionReturn(0); 1614b019bd2SJed Brown } 1624b019bd2SJed Brown 1634b019bd2SJed Brown #undef __FUNCT__ 1644b019bd2SJed Brown #define __FUNCT__ "MatSolveTranspose_UMFPACK" 1654b019bd2SJed Brown static PetscErrorCode MatSolveTranspose_UMFPACK(Mat A,Vec b,Vec x) 1664b019bd2SJed Brown { 1674b019bd2SJed Brown PetscErrorCode ierr; 1684b019bd2SJed Brown 1694b019bd2SJed Brown PetscFunctionBegin; 1704b019bd2SJed Brown /* We gave UMFPACK the algebraic transpose (because it assumes column alignment) */ 1714b019bd2SJed Brown ierr = MatSolve_UMFPACK_Private(A,b,x,UMFPACK_A);CHKERRQ(ierr); 1721677d0b8SKris Buschelman PetscFunctionReturn(0); 1731677d0b8SKris Buschelman } 1741677d0b8SKris Buschelman 1751677d0b8SKris Buschelman #undef __FUNCT__ 176f0c56d0fSKris Buschelman #define __FUNCT__ "MatLUFactorNumeric_UMFPACK" 1774b019bd2SJed Brown static PetscErrorCode MatLUFactorNumeric_UMFPACK(Mat F,Mat A,const MatFactorInfo *info) 1786849ba73SBarry Smith { 179719d5645SBarry Smith Mat_UMFPACK *lu = (Mat_UMFPACK*)(F)->spptr; 180ae26a541SJed Brown Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 181ae26a541SJed Brown PetscInt *ai = a->i,*aj=a->j,status; 182ae26a541SJed Brown PetscScalar *av = a->a; 1836849ba73SBarry Smith PetscErrorCode ierr; 1841677d0b8SKris Buschelman 1851677d0b8SKris Buschelman PetscFunctionBegin; 1861677d0b8SKris Buschelman /* numeric factorization of A' */ 1871677d0b8SKris Buschelman /* ----------------------------*/ 1882d4e2982SHong Zhang 1898592901bSBarry Smith if (lu->flg == SAME_NONZERO_PATTERN && lu->Numeric) { 1908592901bSBarry Smith umfpack_UMF_free_numeric(&lu->Numeric); 1918592901bSBarry Smith } 1922d4e2982SHong Zhang #if defined(PETSC_USE_COMPLEX) 1938592901bSBarry Smith status = umfpack_UMF_numeric(ai,aj,(double*)av,NULL,lu->Symbolic,&lu->Numeric,lu->Control,lu->Info); 1942d4e2982SHong Zhang #else 1958592901bSBarry Smith status = umfpack_UMF_numeric(ai,aj,av,lu->Symbolic,&lu->Numeric,lu->Control,lu->Info); 1968592901bSBarry Smith #endif 1979f42a82aSMatthew Knepley if (status < 0) { 1988592901bSBarry Smith umfpack_UMF_report_status(lu->Control, status); 199e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"umfpack_UMF_numeric failed"); 2009f42a82aSMatthew Knepley } 2012d4e2982SHong Zhang /* report numeric factorization of A' when Control[PRL] > 3 */ 2028592901bSBarry Smith (void) umfpack_UMF_report_numeric(lu->Numeric, lu->Control); 2031677d0b8SKris Buschelman 204ae26a541SJed Brown ierr = PetscObjectReference((PetscObject)A);CHKERRQ(ierr); 205ae26a541SJed Brown ierr = MatDestroy(&lu->A);CHKERRQ(ierr); 2062205254eSKarl Rupp 207ae26a541SJed Brown lu->A = A; 2082a325a84SHong Zhang lu->flg = SAME_NONZERO_PATTERN; 2092a325a84SHong Zhang lu->CleanUpUMFPACK = PETSC_TRUE; 2104b019bd2SJed Brown F->ops->solve = MatSolve_UMFPACK; 2114b019bd2SJed Brown F->ops->solvetranspose = MatSolveTranspose_UMFPACK; 2121677d0b8SKris Buschelman PetscFunctionReturn(0); 2131677d0b8SKris Buschelman } 2141677d0b8SKris Buschelman 2151677d0b8SKris Buschelman /* 2161677d0b8SKris Buschelman Note the r permutation is ignored 2171677d0b8SKris Buschelman */ 2181677d0b8SKris Buschelman #undef __FUNCT__ 219f0c56d0fSKris Buschelman #define __FUNCT__ "MatLUFactorSymbolic_UMFPACK" 2204b019bd2SJed Brown static PetscErrorCode MatLUFactorSymbolic_UMFPACK(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 2216849ba73SBarry Smith { 222ae26a541SJed Brown Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 223719d5645SBarry Smith Mat_UMFPACK *lu = (Mat_UMFPACK*)(F->spptr); 224dfbe8321SBarry Smith PetscErrorCode ierr; 225ae26a541SJed Brown PetscInt i,*ai = a->i,*aj = a->j,m=A->rmap->n,n=A->cmap->n; 226ae26a541SJed Brown PetscScalar *av = a->a; 2275d0c19d7SBarry Smith const PetscInt *ra; 2288592901bSBarry Smith PetscInt status; 2291677d0b8SKris Buschelman 2301677d0b8SKris Buschelman PetscFunctionBegin; 231fcfd50ebSBarry Smith if (lu->PetscMatOrdering) { 2320f6efc10SHong Zhang ierr = ISGetIndices(r,&ra);CHKERRQ(ierr); 233785e854fSJed Brown ierr = PetscMalloc1(m,&lu->perm_c);CHKERRQ(ierr); 2342d4e2982SHong Zhang /* we cannot simply memcpy on 64 bit archs */ 2352d4e2982SHong Zhang for (i = 0; i < m; i++) lu->perm_c[i] = ra[i]; 2360f6efc10SHong Zhang ierr = ISRestoreIndices(r,&ra);CHKERRQ(ierr); 2371677d0b8SKris Buschelman } 2381677d0b8SKris Buschelman 2391677d0b8SKris Buschelman /* print the control parameters */ 2408592901bSBarry Smith if (lu->Control[UMFPACK_PRL] > 1) umfpack_UMF_report_control(lu->Control); 2411677d0b8SKris Buschelman 2421677d0b8SKris Buschelman /* symbolic factorization of A' */ 2431677d0b8SKris Buschelman /* ---------------------------------------------------------------------- */ 244fcfd50ebSBarry Smith if (lu->PetscMatOrdering) { /* use Petsc row ordering */ 2458592901bSBarry Smith #if !defined(PETSC_USE_COMPLEX) 246ae26a541SJed Brown status = umfpack_UMF_qsymbolic(n,m,ai,aj,av,lu->perm_c,&lu->Symbolic,lu->Control,lu->Info); 2472d4e2982SHong Zhang #else 248b0043f70SBarry Smith status = umfpack_UMF_qsymbolic(n,m,ai,aj,NULL,NULL,lu->perm_c,&lu->Symbolic,lu->Control,lu->Info); 2498592901bSBarry Smith #endif 2502d4e2982SHong Zhang } else { /* use Umfpack col ordering */ 2518592901bSBarry Smith #if !defined(PETSC_USE_COMPLEX) 252ae26a541SJed Brown status = umfpack_UMF_symbolic(n,m,ai,aj,av,&lu->Symbolic,lu->Control,lu->Info); 2538592901bSBarry Smith #else 254ae26a541SJed Brown status = umfpack_UMF_symbolic(n,m,ai,aj,NULL,NULL,&lu->Symbolic,lu->Control,lu->Info); 2558592901bSBarry Smith #endif 2562d4e2982SHong Zhang } 2572d4e2982SHong Zhang if (status < 0) { 2588592901bSBarry Smith umfpack_UMF_report_info(lu->Control, lu->Info); 2598592901bSBarry Smith umfpack_UMF_report_status(lu->Control, status); 260e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"umfpack_UMF_symbolic failed"); 2612d4e2982SHong Zhang } 2622d4e2982SHong Zhang /* report sumbolic factorization of A' when Control[PRL] > 3 */ 2638592901bSBarry Smith (void) umfpack_UMF_report_symbolic(lu->Symbolic, lu->Control); 2641677d0b8SKris Buschelman 2651677d0b8SKris Buschelman lu->flg = DIFFERENT_NONZERO_PATTERN; 266e1b4c3a1SKris Buschelman lu->CleanUpUMFPACK = PETSC_TRUE; 267719d5645SBarry Smith (F)->ops->lufactornumeric = MatLUFactorNumeric_UMFPACK; 2681677d0b8SKris Buschelman PetscFunctionReturn(0); 2691677d0b8SKris Buschelman } 2701677d0b8SKris Buschelman 2711677d0b8SKris Buschelman #undef __FUNCT__ 272f0c56d0fSKris Buschelman #define __FUNCT__ "MatFactorInfo_UMFPACK" 2734b019bd2SJed Brown static PetscErrorCode MatFactorInfo_UMFPACK(Mat A,PetscViewer viewer) 2746849ba73SBarry Smith { 275f0c56d0fSKris Buschelman Mat_UMFPACK *lu= (Mat_UMFPACK*)A->spptr; 276dfbe8321SBarry Smith PetscErrorCode ierr; 277f0c56d0fSKris Buschelman 2781677d0b8SKris Buschelman PetscFunctionBegin; 2791677d0b8SKris Buschelman /* check if matrix is UMFPACK type */ 280f0c56d0fSKris Buschelman if (A->ops->solve != MatSolve_UMFPACK) PetscFunctionReturn(0); 2811677d0b8SKris Buschelman 2821677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer,"UMFPACK run parameters:\n");CHKERRQ(ierr); 2831677d0b8SKris Buschelman /* Control parameters used by reporting routiones */ 2841677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_PRL]: %g\n",lu->Control[UMFPACK_PRL]);CHKERRQ(ierr); 2851677d0b8SKris Buschelman 2861677d0b8SKris Buschelman /* Control parameters used by symbolic factorization */ 2870f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_STRATEGY]: %g\n",lu->Control[UMFPACK_STRATEGY]);CHKERRQ(ierr); 2881677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_DENSE_COL]: %g\n",lu->Control[UMFPACK_DENSE_COL]);CHKERRQ(ierr); 2891677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_DENSE_ROW]: %g\n",lu->Control[UMFPACK_DENSE_ROW]);CHKERRQ(ierr); 2900f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_AMD_DENSE]: %g\n",lu->Control[UMFPACK_AMD_DENSE]);CHKERRQ(ierr); 2911677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_BLOCK_SIZE]: %g\n",lu->Control[UMFPACK_BLOCK_SIZE]);CHKERRQ(ierr); 2920f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_FIXQ]: %g\n",lu->Control[UMFPACK_FIXQ]);CHKERRQ(ierr); 2930f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_AGGRESSIVE]: %g\n",lu->Control[UMFPACK_AGGRESSIVE]);CHKERRQ(ierr); 2941677d0b8SKris Buschelman 2951677d0b8SKris Buschelman /* Control parameters used by numeric factorization */ 2961677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_PIVOT_TOLERANCE]: %g\n",lu->Control[UMFPACK_PIVOT_TOLERANCE]);CHKERRQ(ierr); 2970f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_SYM_PIVOT_TOLERANCE]: %g\n",lu->Control[UMFPACK_SYM_PIVOT_TOLERANCE]);CHKERRQ(ierr); 2980f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_SCALE]: %g\n",lu->Control[UMFPACK_SCALE]);CHKERRQ(ierr); 2991677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_ALLOC_INIT]: %g\n",lu->Control[UMFPACK_ALLOC_INIT]);CHKERRQ(ierr); 3000f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_DROPTOL]: %g\n",lu->Control[UMFPACK_DROPTOL]);CHKERRQ(ierr); 3011677d0b8SKris Buschelman 3021677d0b8SKris Buschelman /* Control parameters used by solve */ 3031677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_IRSTEP]: %g\n",lu->Control[UMFPACK_IRSTEP]);CHKERRQ(ierr); 3041677d0b8SKris Buschelman 3051677d0b8SKris Buschelman /* mat ordering */ 306fcfd50ebSBarry Smith if (!lu->PetscMatOrdering) { 307fcfd50ebSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_ORDERING]: %s (not using the PETSc ordering)\n",UmfpackOrderingTypes[(int)lu->Control[UMFPACK_ORDERING]]);CHKERRQ(ierr); 308fcfd50ebSBarry Smith } 3091677d0b8SKris Buschelman PetscFunctionReturn(0); 3101677d0b8SKris Buschelman } 3111677d0b8SKris Buschelman 312d844382dSKris Buschelman #undef __FUNCT__ 313f0c56d0fSKris Buschelman #define __FUNCT__ "MatView_UMFPACK" 3144b019bd2SJed Brown static PetscErrorCode MatView_UMFPACK(Mat A,PetscViewer viewer) 3156849ba73SBarry Smith { 316dfbe8321SBarry Smith PetscErrorCode ierr; 317ace3abfcSBarry Smith PetscBool iascii; 318d844382dSKris Buschelman PetscViewerFormat format; 319d844382dSKris Buschelman 320d844382dSKris Buschelman PetscFunctionBegin; 321b24902e0SBarry Smith ierr = MatView_SeqAIJ(A,viewer);CHKERRQ(ierr); 322d844382dSKris Buschelman 323251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 32432077d6dSBarry Smith if (iascii) { 325d844382dSKris Buschelman ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 3262f59403fSHong Zhang if (format == PETSC_VIEWER_ASCII_INFO) { 327f0c56d0fSKris Buschelman ierr = MatFactorInfo_UMFPACK(A,viewer);CHKERRQ(ierr); 328d844382dSKris Buschelman } 329d844382dSKris Buschelman } 330d844382dSKris Buschelman PetscFunctionReturn(0); 331d844382dSKris Buschelman } 332d844382dSKris Buschelman 33335bd34faSBarry Smith #undef __FUNCT__ 33435bd34faSBarry Smith #define __FUNCT__ "MatFactorGetSolverPackage_seqaij_umfpack" 33535bd34faSBarry Smith PetscErrorCode MatFactorGetSolverPackage_seqaij_umfpack(Mat A,const MatSolverPackage *type) 33635bd34faSBarry Smith { 33735bd34faSBarry Smith PetscFunctionBegin; 3382692d6eeSBarry Smith *type = MATSOLVERUMFPACK; 33935bd34faSBarry Smith PetscFunctionReturn(0); 34035bd34faSBarry Smith } 34135bd34faSBarry Smith 34235bd34faSBarry Smith 3432f71e704SKris Buschelman /*MC 3442692d6eeSBarry Smith MATSOLVERUMFPACK = "umfpack" - A matrix type providing direct solvers (LU) for sequential matrices 3452f71e704SKris Buschelman via the external package UMFPACK. 3462f71e704SKris Buschelman 347f02a4714SShri ./configure --download-suitesparse to install PETSc to use UMFPACK 3482f71e704SKris Buschelman 3492f71e704SKris Buschelman Consult UMFPACK documentation for more information about the Control parameters 3502f71e704SKris Buschelman which correspond to the options database keys below. 3512f71e704SKris Buschelman 3522f71e704SKris Buschelman Options Database Keys: 353ba41fbb6SBarry Smith + -mat_umfpack_ordering - CHOLMOD, AMD, GIVEN, METIS, BEST, NONE 354ba41fbb6SBarry Smith . -mat_umfpack_prl - UMFPACK print level: Control[UMFPACK_PRL] 355e08999f5SMatthew G Knepley . -mat_umfpack_strategy <AUTO> - (choose one of) AUTO UNSYMMETRIC SYMMETRIC 2BY2 3562f71e704SKris Buschelman . -mat_umfpack_dense_col <alpha_c> - UMFPACK dense column threshold: Control[UMFPACK_DENSE_COL] 357e08999f5SMatthew G Knepley . -mat_umfpack_dense_row <0.2> - Control[UMFPACK_DENSE_ROW] 358e08999f5SMatthew G Knepley . -mat_umfpack_amd_dense <10> - Control[UMFPACK_AMD_DENSE] 3592f71e704SKris Buschelman . -mat_umfpack_block_size <bs> - UMFPACK block size for BLAS-Level 3 calls: Control[UMFPACK_BLOCK_SIZE] 360e08999f5SMatthew G Knepley . -mat_umfpack_2by2_tolerance <0.01> - Control[UMFPACK_2BY2_TOLERANCE] 361e08999f5SMatthew G Knepley . -mat_umfpack_fixq <0> - Control[UMFPACK_FIXQ] 362e08999f5SMatthew G Knepley . -mat_umfpack_aggressive <1> - Control[UMFPACK_AGGRESSIVE] 3632f71e704SKris Buschelman . -mat_umfpack_pivot_tolerance <delta> - UMFPACK partial pivot tolerance: Control[UMFPACK_PIVOT_TOLERANCE] 364e08999f5SMatthew G Knepley . -mat_umfpack_sym_pivot_tolerance <0.001> - Control[UMFPACK_SYM_PIVOT_TOLERANCE] 365e08999f5SMatthew G Knepley . -mat_umfpack_scale <NONE> - (choose one of) NONE SUM MAX 3662f71e704SKris Buschelman . -mat_umfpack_alloc_init <delta> - UMFPACK factorized matrix allocation modifier: Control[UMFPACK_ALLOC_INIT] 367e08999f5SMatthew G Knepley . -mat_umfpack_droptol <0> - Control[UMFPACK_DROPTOL] 3682f71e704SKris Buschelman - -mat_umfpack_irstep <maxit> - UMFPACK maximum number of iterative refinement steps: Control[UMFPACK_IRSTEP] 3692f71e704SKris Buschelman 3702f71e704SKris Buschelman Level: beginner 371a364b7d2SBarry Smith 372a364b7d2SBarry Smith Note: UMFPACK is part of SuiteSparse http://faculty.cse.tamu.edu/davis/suitesparse.html 3732f71e704SKris Buschelman 374d45987f3SHong Zhang .seealso: PCLU, MATSOLVERSUPERLU, MATSOLVERMUMPS, PCFactorSetMatSolverPackage(), MatSolverPackage 3752f71e704SKris Buschelman M*/ 376b2573a8aSBarry Smith 3773519fcdcSHong Zhang #undef __FUNCT__ 3783519fcdcSHong Zhang #define __FUNCT__ "MatGetFactor_seqaij_umfpack" 3798cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatGetFactor_seqaij_umfpack(Mat A,MatFactorType ftype,Mat *F) 3803519fcdcSHong Zhang { 3813519fcdcSHong Zhang Mat B; 3823519fcdcSHong Zhang Mat_UMFPACK *lu; 3833519fcdcSHong Zhang PetscErrorCode ierr; 3848592901bSBarry Smith PetscInt m=A->rmap->n,n=A->cmap->n,idx; 3852f71e704SKris Buschelman 3862205254eSKarl Rupp const char *strategy[]={"AUTO","UNSYMMETRIC","SYMMETRIC"}; 3872205254eSKarl Rupp const char *scale[] ={"NONE","SUM","MAX"}; 388ace3abfcSBarry Smith PetscBool flg; 3892d4e2982SHong Zhang 3903519fcdcSHong Zhang PetscFunctionBegin; 3913519fcdcSHong Zhang /* Create the factorization matrix F */ 392ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 3933519fcdcSHong Zhang ierr = MatSetSizes(B,PETSC_DECIDE,PETSC_DECIDE,m,n);CHKERRQ(ierr); 3943519fcdcSHong Zhang ierr = MatSetType(B,((PetscObject)A)->type_name);CHKERRQ(ierr); 3950298fd71SBarry Smith ierr = MatSeqAIJSetPreallocation(B,0,NULL);CHKERRQ(ierr); 396b00a9115SJed Brown ierr = PetscNewLog(B,&lu);CHKERRQ(ierr); 3972205254eSKarl Rupp 3983519fcdcSHong Zhang B->spptr = lu; 3993519fcdcSHong Zhang B->ops->lufactorsymbolic = MatLUFactorSymbolic_UMFPACK; 4003519fcdcSHong Zhang B->ops->destroy = MatDestroy_UMFPACK; 4013519fcdcSHong Zhang B->ops->view = MatView_UMFPACK; 4022205254eSKarl Rupp 403bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverPackage_C",MatFactorGetSolverPackage_seqaij_umfpack);CHKERRQ(ierr); 4042205254eSKarl Rupp 405d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 4063519fcdcSHong Zhang B->assembled = PETSC_TRUE; /* required by -ksp_view */ 4073519fcdcSHong Zhang B->preallocated = PETSC_TRUE; 4083519fcdcSHong Zhang 4093519fcdcSHong Zhang /* initializations */ 4103519fcdcSHong Zhang /* ------------------------------------------------*/ 4113519fcdcSHong Zhang /* get the default control parameters */ 4128592901bSBarry Smith umfpack_UMF_defaults(lu->Control); 4130298fd71SBarry Smith lu->perm_c = NULL; /* use defaul UMFPACK col permutation */ 4143519fcdcSHong Zhang lu->Control[UMFPACK_IRSTEP] = 0; /* max num of iterative refinement steps to attempt */ 4153519fcdcSHong Zhang 416ce94432eSBarry Smith ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"UMFPACK Options","Mat");CHKERRQ(ierr); 4173519fcdcSHong Zhang /* Control parameters used by reporting routiones */ 4180298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_prl","Control[UMFPACK_PRL]","None",lu->Control[UMFPACK_PRL],&lu->Control[UMFPACK_PRL],NULL);CHKERRQ(ierr); 4193519fcdcSHong Zhang 4203519fcdcSHong Zhang /* Control parameters for symbolic factorization */ 421fcfd50ebSBarry Smith ierr = PetscOptionsEList("-mat_umfpack_strategy","ordering and pivoting strategy","None",strategy,3,strategy[0],&idx,&flg);CHKERRQ(ierr); 4223519fcdcSHong Zhang if (flg) { 4233519fcdcSHong Zhang switch (idx) { 4243519fcdcSHong Zhang case 0: lu->Control[UMFPACK_STRATEGY] = UMFPACK_STRATEGY_AUTO; break; 4253519fcdcSHong Zhang case 1: lu->Control[UMFPACK_STRATEGY] = UMFPACK_STRATEGY_UNSYMMETRIC; break; 4263519fcdcSHong Zhang case 2: lu->Control[UMFPACK_STRATEGY] = UMFPACK_STRATEGY_SYMMETRIC; break; 4273519fcdcSHong Zhang } 4283519fcdcSHong Zhang } 4298caf3d72SBarry Smith ierr = PetscOptionsEList("-mat_umfpack_ordering","Internal ordering method","None",UmfpackOrderingTypes,sizeof(UmfpackOrderingTypes)/sizeof(UmfpackOrderingTypes[0]),UmfpackOrderingTypes[(int)lu->Control[UMFPACK_ORDERING]],&idx,&flg);CHKERRQ(ierr); 430fcfd50ebSBarry Smith if (flg) lu->Control[UMFPACK_ORDERING] = (int)idx; 4310298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_dense_col","Control[UMFPACK_DENSE_COL]","None",lu->Control[UMFPACK_DENSE_COL],&lu->Control[UMFPACK_DENSE_COL],NULL);CHKERRQ(ierr); 4320298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_dense_row","Control[UMFPACK_DENSE_ROW]","None",lu->Control[UMFPACK_DENSE_ROW],&lu->Control[UMFPACK_DENSE_ROW],NULL);CHKERRQ(ierr); 4330298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_amd_dense","Control[UMFPACK_AMD_DENSE]","None",lu->Control[UMFPACK_AMD_DENSE],&lu->Control[UMFPACK_AMD_DENSE],NULL);CHKERRQ(ierr); 4340298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_block_size","Control[UMFPACK_BLOCK_SIZE]","None",lu->Control[UMFPACK_BLOCK_SIZE],&lu->Control[UMFPACK_BLOCK_SIZE],NULL);CHKERRQ(ierr); 4350298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_fixq","Control[UMFPACK_FIXQ]","None",lu->Control[UMFPACK_FIXQ],&lu->Control[UMFPACK_FIXQ],NULL);CHKERRQ(ierr); 4360298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_aggressive","Control[UMFPACK_AGGRESSIVE]","None",lu->Control[UMFPACK_AGGRESSIVE],&lu->Control[UMFPACK_AGGRESSIVE],NULL);CHKERRQ(ierr); 4373519fcdcSHong Zhang 4383519fcdcSHong Zhang /* Control parameters used by numeric factorization */ 4390298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_pivot_tolerance","Control[UMFPACK_PIVOT_TOLERANCE]","None",lu->Control[UMFPACK_PIVOT_TOLERANCE],&lu->Control[UMFPACK_PIVOT_TOLERANCE],NULL);CHKERRQ(ierr); 4400298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_sym_pivot_tolerance","Control[UMFPACK_SYM_PIVOT_TOLERANCE]","None",lu->Control[UMFPACK_SYM_PIVOT_TOLERANCE],&lu->Control[UMFPACK_SYM_PIVOT_TOLERANCE],NULL);CHKERRQ(ierr); 4413519fcdcSHong Zhang ierr = PetscOptionsEList("-mat_umfpack_scale","Control[UMFPACK_SCALE]","None",scale,3,scale[0],&idx,&flg);CHKERRQ(ierr); 4423519fcdcSHong Zhang if (flg) { 4433519fcdcSHong Zhang switch (idx) { 4443519fcdcSHong Zhang case 0: lu->Control[UMFPACK_SCALE] = UMFPACK_SCALE_NONE; break; 4453519fcdcSHong Zhang case 1: lu->Control[UMFPACK_SCALE] = UMFPACK_SCALE_SUM; break; 4463519fcdcSHong Zhang case 2: lu->Control[UMFPACK_SCALE] = UMFPACK_SCALE_MAX; break; 4473519fcdcSHong Zhang } 4483519fcdcSHong Zhang } 4490298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_alloc_init","Control[UMFPACK_ALLOC_INIT]","None",lu->Control[UMFPACK_ALLOC_INIT],&lu->Control[UMFPACK_ALLOC_INIT],NULL);CHKERRQ(ierr); 4500298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_front_alloc_init","Control[UMFPACK_FRONT_ALLOC_INIT]","None",lu->Control[UMFPACK_FRONT_ALLOC_INIT],&lu->Control[UMFPACK_ALLOC_INIT],NULL);CHKERRQ(ierr); 4510298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_droptol","Control[UMFPACK_DROPTOL]","None",lu->Control[UMFPACK_DROPTOL],&lu->Control[UMFPACK_DROPTOL],NULL);CHKERRQ(ierr); 4523519fcdcSHong Zhang 4533519fcdcSHong Zhang /* Control parameters used by solve */ 4540298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_irstep","Control[UMFPACK_IRSTEP]","None",lu->Control[UMFPACK_IRSTEP],&lu->Control[UMFPACK_IRSTEP],NULL);CHKERRQ(ierr); 4553519fcdcSHong Zhang 4563519fcdcSHong Zhang /* use Petsc mat ordering (note: size is for the transpose, and PETSc r = Umfpack perm_c) */ 4570298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-pc_factor_mat_ordering_type",&lu->PetscMatOrdering);CHKERRQ(ierr); 4583519fcdcSHong Zhang PetscOptionsEnd(); 4593519fcdcSHong Zhang *F = B; 4603519fcdcSHong Zhang PetscFunctionReturn(0); 4613519fcdcSHong Zhang } 462b2573a8aSBarry Smith 46342c9c57cSBarry Smith PETSC_EXTERN PetscErrorCode MatGetFactor_seqaij_cholmod(Mat,MatFactorType,Mat*); 46442c9c57cSBarry Smith PETSC_EXTERN PetscErrorCode MatGetFactor_seqsbaij_cholmod(Mat,MatFactorType,Mat*); 46542c9c57cSBarry Smith PETSC_EXTERN PetscErrorCode MatGetFactor_seqaij_klu(Mat,MatFactorType,Mat*); 4662d4e2982SHong Zhang 46742c9c57cSBarry Smith #undef __FUNCT__ 46842c9c57cSBarry Smith #define __FUNCT__ "MatSolverPackageRegister_SuiteSparse" 46929b38603SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverPackageRegister_SuiteSparse(void) 47042c9c57cSBarry Smith { 47142c9c57cSBarry Smith PetscErrorCode ierr; 47242c9c57cSBarry Smith 47342c9c57cSBarry Smith PetscFunctionBegin; 47442c9c57cSBarry Smith ierr = MatSolverPackageRegister(MATSOLVERUMFPACK,MATSEQAIJ, MAT_FACTOR_LU,MatGetFactor_seqaij_umfpack);CHKERRQ(ierr); 47542c9c57cSBarry Smith ierr = MatSolverPackageRegister(MATSOLVERCHOLMOD,MATSEQAIJ, MAT_FACTOR_CHOLESKY,MatGetFactor_seqaij_cholmod);CHKERRQ(ierr); 47642c9c57cSBarry Smith ierr = MatSolverPackageRegister(MATSOLVERCHOLMOD,MATSEQSBAIJ, MAT_FACTOR_CHOLESKY,MatGetFactor_seqsbaij_cholmod);CHKERRQ(ierr); 47742c9c57cSBarry Smith ierr = MatSolverPackageRegister(MATSOLVERKLU,MATSEQAIJ, MAT_FACTOR_LU,MatGetFactor_seqaij_klu);CHKERRQ(ierr); 47842c9c57cSBarry Smith PetscFunctionReturn(0); 47942c9c57cSBarry Smith } 480