11677d0b8SKris Buschelman 21677d0b8SKris Buschelman /* 3d515b9b4SShri Abhyankar Provides an interface to the UMFPACK sparse solver available through SuiteSparse version 4.2.1 42d4e2982SHong Zhang 59e475b0dSSatish Balay When build with PETSC_USE_64BIT_INDICES this will use Suitesparse_long as the 68592901bSBarry Smith integer type in UMFPACK, otherwise it will use int. This means 78592901bSBarry Smith all integers in this file as simply declared as PetscInt. Also it means 89e475b0dSSatish Balay that one cannot use 64BIT_INDICES on 32bit machines [as Suitesparse_long is 32bit only] 92d4e2982SHong Zhang 101677d0b8SKris Buschelman */ 11c6db04a5SJed Brown #include <../src/mat/impls/aij/seq/aij.h> 121677d0b8SKris Buschelman 138592901bSBarry Smith #if defined(PETSC_USE_64BIT_INDICES) 148592901bSBarry Smith #if defined(PETSC_USE_COMPLEX) 158592901bSBarry Smith #define umfpack_UMF_free_symbolic umfpack_zl_free_symbolic 168592901bSBarry Smith #define umfpack_UMF_free_numeric umfpack_zl_free_numeric 17*d755ee67SBarry Smith /* the type casts are needed because PetscInt is long long while SuiteSparse_long is long and compilers warn even when they are identical */ 18*d755ee67SBarry Smith #define umfpack_UMF_wsolve(a,b,c,d,e,f,g,h,i,j,k,l,m,n) umfpack_zl_wsolve(a,(SuiteSparse_long*)b,(SuiteSparse_long*)c,d,e,f,g,h,i,(SuiteSparse_long*)j,k,l,(SuiteSparse_long*)m,n) 19*d755ee67SBarry Smith #define umfpack_UMF_numeric(a,b,c,d,e,f,g,h) umfpack_zl_numeric((SuiteSparse_long*)a,(SuiteSparse_long*)b,c,d,e,f,g,h) 208592901bSBarry Smith #define umfpack_UMF_report_numeric umfpack_zl_report_numeric 218592901bSBarry Smith #define umfpack_UMF_report_control umfpack_zl_report_control 228592901bSBarry Smith #define umfpack_UMF_report_status umfpack_zl_report_status 238592901bSBarry Smith #define umfpack_UMF_report_info umfpack_zl_report_info 248592901bSBarry Smith #define umfpack_UMF_report_symbolic umfpack_zl_report_symbolic 25*d755ee67SBarry Smith #define umfpack_UMF_qsymbolic(a,b,c,d,e,f,g,h,i,j) umfpack_zl_qsymbolic(a,b,(SuiteSparse_long*)c,(SuiteSparse_long*)d,e,f,(SuiteSparse_long*)g,h,i,j) 26*d755ee67SBarry Smith #define umfpack_UMF_symbolic(a,b,c,d,e,f,g,h,i) umfpack_zl_symbolic(a,b,(SuiteSparse_long*)c,(SuiteSparse_long*)d,e,f,g,h,i) 278592901bSBarry Smith #define umfpack_UMF_defaults umfpack_zl_defaults 288592901bSBarry Smith 298592901bSBarry Smith #else 308592901bSBarry Smith #define umfpack_UMF_free_symbolic umfpack_dl_free_symbolic 318592901bSBarry Smith #define umfpack_UMF_free_numeric umfpack_dl_free_numeric 32*d755ee67SBarry Smith #define umfpack_UMF_wsolve(a,b,c,d,e,f,g,h,i,j,k) umfpack_dl_wsolve(a,(SuiteSparse_long*)b,(SuiteSparse_long*)c,d,e,f,g,h,i,(SuiteSparse_long*)j,k) 33*d755ee67SBarry Smith #define umfpack_UMF_numeric(a,b,c,d,e,f,g) umfpack_dl_numeric((SuiteSparse_long*)a,(SuiteSparse_long*)b,c,d,e,f,g) 348592901bSBarry Smith #define umfpack_UMF_report_numeric umfpack_dl_report_numeric 358592901bSBarry Smith #define umfpack_UMF_report_control umfpack_dl_report_control 368592901bSBarry Smith #define umfpack_UMF_report_status umfpack_dl_report_status 378592901bSBarry Smith #define umfpack_UMF_report_info umfpack_dl_report_info 388592901bSBarry Smith #define umfpack_UMF_report_symbolic umfpack_dl_report_symbolic 39*d755ee67SBarry Smith #define umfpack_UMF_qsymbolic(a,b,c,d,e,f,g,h,i) umfpack_dl_qsymbolic(a,b,(SuiteSparse_long*)c,(SuiteSparse_long*)d,e,(SuiteSparse_long*)f,g,h,i) 40*d755ee67SBarry Smith #define umfpack_UMF_symbolic(a,b,c,d,e,f,g,h) umfpack_dl_symbolic(a,b,(SuiteSparse_long*)c,(SuiteSparse_long*)d,e,f,g,h) 418592901bSBarry Smith #define umfpack_UMF_defaults umfpack_dl_defaults 428592901bSBarry Smith #endif 438592901bSBarry Smith 448592901bSBarry Smith #else 458592901bSBarry Smith #if defined(PETSC_USE_COMPLEX) 468592901bSBarry Smith #define umfpack_UMF_free_symbolic umfpack_zi_free_symbolic 478592901bSBarry Smith #define umfpack_UMF_free_numeric umfpack_zi_free_numeric 488592901bSBarry Smith #define umfpack_UMF_wsolve umfpack_zi_wsolve 498592901bSBarry Smith #define umfpack_UMF_numeric umfpack_zi_numeric 508592901bSBarry Smith #define umfpack_UMF_report_numeric umfpack_zi_report_numeric 518592901bSBarry Smith #define umfpack_UMF_report_control umfpack_zi_report_control 528592901bSBarry Smith #define umfpack_UMF_report_status umfpack_zi_report_status 538592901bSBarry Smith #define umfpack_UMF_report_info umfpack_zi_report_info 548592901bSBarry Smith #define umfpack_UMF_report_symbolic umfpack_zi_report_symbolic 558592901bSBarry Smith #define umfpack_UMF_qsymbolic umfpack_zi_qsymbolic 568592901bSBarry Smith #define umfpack_UMF_symbolic umfpack_zi_symbolic 578592901bSBarry Smith #define umfpack_UMF_defaults umfpack_zi_defaults 588592901bSBarry Smith 598592901bSBarry Smith #else 608592901bSBarry Smith #define umfpack_UMF_free_symbolic umfpack_di_free_symbolic 618592901bSBarry Smith #define umfpack_UMF_free_numeric umfpack_di_free_numeric 628592901bSBarry Smith #define umfpack_UMF_wsolve umfpack_di_wsolve 638592901bSBarry Smith #define umfpack_UMF_numeric umfpack_di_numeric 648592901bSBarry Smith #define umfpack_UMF_report_numeric umfpack_di_report_numeric 658592901bSBarry Smith #define umfpack_UMF_report_control umfpack_di_report_control 668592901bSBarry Smith #define umfpack_UMF_report_status umfpack_di_report_status 678592901bSBarry Smith #define umfpack_UMF_report_info umfpack_di_report_info 688592901bSBarry Smith #define umfpack_UMF_report_symbolic umfpack_di_report_symbolic 698592901bSBarry Smith #define umfpack_UMF_qsymbolic umfpack_di_qsymbolic 708592901bSBarry Smith #define umfpack_UMF_symbolic umfpack_di_symbolic 718592901bSBarry Smith #define umfpack_UMF_defaults umfpack_di_defaults 728592901bSBarry Smith #endif 738592901bSBarry Smith #endif 748592901bSBarry Smith 751677d0b8SKris Buschelman EXTERN_C_BEGIN 76c6db04a5SJed Brown #include <umfpack.h> 771677d0b8SKris Buschelman EXTERN_C_END 781677d0b8SKris Buschelman 79fcfd50ebSBarry Smith static const char *const UmfpackOrderingTypes[] = {"CHOLMOD","AMD","GIVEN","METIS","BEST","NONE","USER","UmfpackOrderingTypes","UMFPACK_ORDERING_",0}; 80fcfd50ebSBarry Smith 811677d0b8SKris Buschelman typedef struct { 821677d0b8SKris Buschelman void *Symbolic, *Numeric; 831677d0b8SKris Buschelman double Info[UMFPACK_INFO], Control[UMFPACK_CONTROL],*W; 84ae26a541SJed Brown PetscInt *Wi,*perm_c; 85ae26a541SJed Brown Mat A; /* Matrix used for factorization */ 861677d0b8SKris Buschelman MatStructure flg; 87fcfd50ebSBarry Smith PetscBool PetscMatOrdering; 881677d0b8SKris Buschelman 891677d0b8SKris Buschelman /* Flag to clean up UMFPACK objects during Destroy */ 90ace3abfcSBarry Smith PetscBool CleanUpUMFPACK; 91f0c56d0fSKris Buschelman } Mat_UMFPACK; 92f0c56d0fSKris Buschelman 931677d0b8SKris Buschelman #undef __FUNCT__ 94f0c56d0fSKris Buschelman #define __FUNCT__ "MatDestroy_UMFPACK" 954b019bd2SJed Brown static PetscErrorCode MatDestroy_UMFPACK(Mat A) 96dfbe8321SBarry Smith { 97dfbe8321SBarry Smith PetscErrorCode ierr; 98f0c56d0fSKris Buschelman Mat_UMFPACK *lu=(Mat_UMFPACK*)A->spptr; 991677d0b8SKris Buschelman 1001677d0b8SKris Buschelman PetscFunctionBegin; 101bf0cc555SLisandro Dalcin if (lu && lu->CleanUpUMFPACK) { 1028592901bSBarry Smith umfpack_UMF_free_symbolic(&lu->Symbolic); 1038592901bSBarry Smith umfpack_UMF_free_numeric(&lu->Numeric); 1041677d0b8SKris Buschelman ierr = PetscFree(lu->Wi);CHKERRQ(ierr); 1051677d0b8SKris Buschelman ierr = PetscFree(lu->W);CHKERRQ(ierr); 1061677d0b8SKris Buschelman ierr = PetscFree(lu->perm_c);CHKERRQ(ierr); 1071677d0b8SKris Buschelman } 108ae26a541SJed Brown ierr = MatDestroy(&lu->A);CHKERRQ(ierr); 109da0e1c47SShri Abhyankar ierr = PetscFree(A->spptr);CHKERRQ(ierr); 110b24902e0SBarry Smith ierr = MatDestroy_SeqAIJ(A);CHKERRQ(ierr); 1111677d0b8SKris Buschelman PetscFunctionReturn(0); 1121677d0b8SKris Buschelman } 1131677d0b8SKris Buschelman 1141677d0b8SKris Buschelman #undef __FUNCT__ 1154b019bd2SJed Brown #define __FUNCT__ "MatSolve_UMFPACK_Private" 1164b019bd2SJed Brown static PetscErrorCode MatSolve_UMFPACK_Private(Mat A,Vec b,Vec x,int uflag) 1176849ba73SBarry Smith { 118f0c56d0fSKris Buschelman Mat_UMFPACK *lu = (Mat_UMFPACK*)A->spptr; 119ae26a541SJed Brown Mat_SeqAIJ *a = (Mat_SeqAIJ*)lu->A->data; 120d9ca1df4SBarry Smith PetscScalar *av = a->a,*xa; 121d9ca1df4SBarry Smith const PetscScalar *ba; 122dfbe8321SBarry Smith PetscErrorCode ierr; 123ae26a541SJed Brown PetscInt *ai = a->i,*aj = a->j,status; 1241677d0b8SKris Buschelman 1251677d0b8SKris Buschelman PetscFunctionBegin; 1262d4e2982SHong Zhang /* solve Ax = b by umfpack_*_wsolve */ 1271677d0b8SKris Buschelman /* ----------------------------------*/ 1282d4e2982SHong Zhang 129ae26a541SJed Brown if (!lu->Wi) { /* first time, allocate working space for wsolve */ 130785e854fSJed Brown ierr = PetscMalloc1(A->rmap->n,&lu->Wi);CHKERRQ(ierr); 131785e854fSJed Brown ierr = PetscMalloc1(5*A->rmap->n,&lu->W);CHKERRQ(ierr); 132ae26a541SJed Brown } 133ae26a541SJed Brown 134d9ca1df4SBarry Smith ierr = VecGetArrayRead(b,&ba); 1351677d0b8SKris Buschelman ierr = VecGetArray(x,&xa); 13679c34000SHong Zhang #if defined(PETSC_USE_COMPLEX) 137b0043f70SBarry Smith status = umfpack_UMF_wsolve(uflag,ai,aj,(PetscReal*)av,NULL,(PetscReal*)xa,NULL,(PetscReal*)ba,NULL,lu->Numeric,lu->Control,lu->Info,lu->Wi,lu->W); 13879c34000SHong Zhang #else 1394b019bd2SJed Brown status = umfpack_UMF_wsolve(uflag,ai,aj,av,xa,ba,lu->Numeric,lu->Control,lu->Info,lu->Wi,lu->W); 14079c34000SHong Zhang #endif 1418592901bSBarry Smith umfpack_UMF_report_info(lu->Control, lu->Info); 1421677d0b8SKris Buschelman if (status < 0) { 1438592901bSBarry Smith umfpack_UMF_report_status(lu->Control, status); 144e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"umfpack_UMF_wsolve failed"); 1451677d0b8SKris Buschelman } 1461677d0b8SKris Buschelman 147d9ca1df4SBarry Smith ierr = VecRestoreArrayRead(b,&ba);CHKERRQ(ierr); 148057dcbc9SJed Brown ierr = VecRestoreArray(x,&xa);CHKERRQ(ierr); 1494b019bd2SJed Brown PetscFunctionReturn(0); 1504b019bd2SJed Brown } 1512a325a84SHong Zhang 1524b019bd2SJed Brown #undef __FUNCT__ 1534b019bd2SJed Brown #define __FUNCT__ "MatSolve_UMFPACK" 1544b019bd2SJed Brown static PetscErrorCode MatSolve_UMFPACK(Mat A,Vec b,Vec x) 1554b019bd2SJed Brown { 1564b019bd2SJed Brown PetscErrorCode ierr; 1574b019bd2SJed Brown 1584b019bd2SJed Brown PetscFunctionBegin; 1594b019bd2SJed Brown /* We gave UMFPACK the algebraic transpose (because it assumes column alignment) */ 1604b019bd2SJed Brown ierr = MatSolve_UMFPACK_Private(A,b,x,UMFPACK_Aat);CHKERRQ(ierr); 1614b019bd2SJed Brown PetscFunctionReturn(0); 1624b019bd2SJed Brown } 1634b019bd2SJed Brown 1644b019bd2SJed Brown #undef __FUNCT__ 1654b019bd2SJed Brown #define __FUNCT__ "MatSolveTranspose_UMFPACK" 1664b019bd2SJed Brown static PetscErrorCode MatSolveTranspose_UMFPACK(Mat A,Vec b,Vec x) 1674b019bd2SJed Brown { 1684b019bd2SJed Brown PetscErrorCode ierr; 1694b019bd2SJed Brown 1704b019bd2SJed Brown PetscFunctionBegin; 1714b019bd2SJed Brown /* We gave UMFPACK the algebraic transpose (because it assumes column alignment) */ 1724b019bd2SJed Brown ierr = MatSolve_UMFPACK_Private(A,b,x,UMFPACK_A);CHKERRQ(ierr); 1731677d0b8SKris Buschelman PetscFunctionReturn(0); 1741677d0b8SKris Buschelman } 1751677d0b8SKris Buschelman 1761677d0b8SKris Buschelman #undef __FUNCT__ 177f0c56d0fSKris Buschelman #define __FUNCT__ "MatLUFactorNumeric_UMFPACK" 1784b019bd2SJed Brown static PetscErrorCode MatLUFactorNumeric_UMFPACK(Mat F,Mat A,const MatFactorInfo *info) 1796849ba73SBarry Smith { 180719d5645SBarry Smith Mat_UMFPACK *lu = (Mat_UMFPACK*)(F)->spptr; 181ae26a541SJed Brown Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 182ae26a541SJed Brown PetscInt *ai = a->i,*aj=a->j,status; 183ae26a541SJed Brown PetscScalar *av = a->a; 1846849ba73SBarry Smith PetscErrorCode ierr; 1851677d0b8SKris Buschelman 1861677d0b8SKris Buschelman PetscFunctionBegin; 1871677d0b8SKris Buschelman /* numeric factorization of A' */ 1881677d0b8SKris Buschelman /* ----------------------------*/ 1892d4e2982SHong Zhang 1908592901bSBarry Smith if (lu->flg == SAME_NONZERO_PATTERN && lu->Numeric) { 1918592901bSBarry Smith umfpack_UMF_free_numeric(&lu->Numeric); 1928592901bSBarry Smith } 1932d4e2982SHong Zhang #if defined(PETSC_USE_COMPLEX) 1948592901bSBarry Smith status = umfpack_UMF_numeric(ai,aj,(double*)av,NULL,lu->Symbolic,&lu->Numeric,lu->Control,lu->Info); 1952d4e2982SHong Zhang #else 1968592901bSBarry Smith status = umfpack_UMF_numeric(ai,aj,av,lu->Symbolic,&lu->Numeric,lu->Control,lu->Info); 1978592901bSBarry Smith #endif 1989f42a82aSMatthew Knepley if (status < 0) { 1998592901bSBarry Smith umfpack_UMF_report_status(lu->Control, status); 200e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"umfpack_UMF_numeric failed"); 2019f42a82aSMatthew Knepley } 2022d4e2982SHong Zhang /* report numeric factorization of A' when Control[PRL] > 3 */ 2038592901bSBarry Smith (void) umfpack_UMF_report_numeric(lu->Numeric, lu->Control); 2041677d0b8SKris Buschelman 205ae26a541SJed Brown ierr = PetscObjectReference((PetscObject)A);CHKERRQ(ierr); 206ae26a541SJed Brown ierr = MatDestroy(&lu->A);CHKERRQ(ierr); 2072205254eSKarl Rupp 208ae26a541SJed Brown lu->A = A; 2092a325a84SHong Zhang lu->flg = SAME_NONZERO_PATTERN; 2102a325a84SHong Zhang lu->CleanUpUMFPACK = PETSC_TRUE; 2114b019bd2SJed Brown F->ops->solve = MatSolve_UMFPACK; 2124b019bd2SJed Brown F->ops->solvetranspose = MatSolveTranspose_UMFPACK; 2131677d0b8SKris Buschelman PetscFunctionReturn(0); 2141677d0b8SKris Buschelman } 2151677d0b8SKris Buschelman 2161677d0b8SKris Buschelman /* 2171677d0b8SKris Buschelman Note the r permutation is ignored 2181677d0b8SKris Buschelman */ 2191677d0b8SKris Buschelman #undef __FUNCT__ 220f0c56d0fSKris Buschelman #define __FUNCT__ "MatLUFactorSymbolic_UMFPACK" 2214b019bd2SJed Brown static PetscErrorCode MatLUFactorSymbolic_UMFPACK(Mat F,Mat A,IS r,IS c,const MatFactorInfo *info) 2226849ba73SBarry Smith { 223ae26a541SJed Brown Mat_SeqAIJ *a = (Mat_SeqAIJ*)A->data; 224719d5645SBarry Smith Mat_UMFPACK *lu = (Mat_UMFPACK*)(F->spptr); 225dfbe8321SBarry Smith PetscErrorCode ierr; 226ae26a541SJed Brown PetscInt i,*ai = a->i,*aj = a->j,m=A->rmap->n,n=A->cmap->n; 227989213a4SSatish Balay #if !defined(PETSC_USE_COMPLEX) 228ae26a541SJed Brown PetscScalar *av = a->a; 229989213a4SSatish Balay #endif 2305d0c19d7SBarry Smith const PetscInt *ra; 2318592901bSBarry Smith PetscInt status; 2321677d0b8SKris Buschelman 2331677d0b8SKris Buschelman PetscFunctionBegin; 234fcfd50ebSBarry Smith if (lu->PetscMatOrdering) { 2350f6efc10SHong Zhang ierr = ISGetIndices(r,&ra);CHKERRQ(ierr); 236785e854fSJed Brown ierr = PetscMalloc1(m,&lu->perm_c);CHKERRQ(ierr); 2372d4e2982SHong Zhang /* we cannot simply memcpy on 64 bit archs */ 2382d4e2982SHong Zhang for (i = 0; i < m; i++) lu->perm_c[i] = ra[i]; 2390f6efc10SHong Zhang ierr = ISRestoreIndices(r,&ra);CHKERRQ(ierr); 2401677d0b8SKris Buschelman } 2411677d0b8SKris Buschelman 2421677d0b8SKris Buschelman /* print the control parameters */ 2438592901bSBarry Smith if (lu->Control[UMFPACK_PRL] > 1) umfpack_UMF_report_control(lu->Control); 2441677d0b8SKris Buschelman 2451677d0b8SKris Buschelman /* symbolic factorization of A' */ 2461677d0b8SKris Buschelman /* ---------------------------------------------------------------------- */ 247fcfd50ebSBarry Smith if (lu->PetscMatOrdering) { /* use Petsc row ordering */ 2488592901bSBarry Smith #if !defined(PETSC_USE_COMPLEX) 249ae26a541SJed Brown status = umfpack_UMF_qsymbolic(n,m,ai,aj,av,lu->perm_c,&lu->Symbolic,lu->Control,lu->Info); 2502d4e2982SHong Zhang #else 251b0043f70SBarry Smith status = umfpack_UMF_qsymbolic(n,m,ai,aj,NULL,NULL,lu->perm_c,&lu->Symbolic,lu->Control,lu->Info); 2528592901bSBarry Smith #endif 2532d4e2982SHong Zhang } else { /* use Umfpack col ordering */ 2548592901bSBarry Smith #if !defined(PETSC_USE_COMPLEX) 255ae26a541SJed Brown status = umfpack_UMF_symbolic(n,m,ai,aj,av,&lu->Symbolic,lu->Control,lu->Info); 2568592901bSBarry Smith #else 257ae26a541SJed Brown status = umfpack_UMF_symbolic(n,m,ai,aj,NULL,NULL,&lu->Symbolic,lu->Control,lu->Info); 2588592901bSBarry Smith #endif 2592d4e2982SHong Zhang } 2602d4e2982SHong Zhang if (status < 0) { 2618592901bSBarry Smith umfpack_UMF_report_info(lu->Control, lu->Info); 2628592901bSBarry Smith umfpack_UMF_report_status(lu->Control, status); 263e32f2f54SBarry Smith SETERRQ(PETSC_COMM_SELF,PETSC_ERR_LIB,"umfpack_UMF_symbolic failed"); 2642d4e2982SHong Zhang } 2652d4e2982SHong Zhang /* report sumbolic factorization of A' when Control[PRL] > 3 */ 2668592901bSBarry Smith (void) umfpack_UMF_report_symbolic(lu->Symbolic, lu->Control); 2671677d0b8SKris Buschelman 2681677d0b8SKris Buschelman lu->flg = DIFFERENT_NONZERO_PATTERN; 269e1b4c3a1SKris Buschelman lu->CleanUpUMFPACK = PETSC_TRUE; 270719d5645SBarry Smith (F)->ops->lufactornumeric = MatLUFactorNumeric_UMFPACK; 2711677d0b8SKris Buschelman PetscFunctionReturn(0); 2721677d0b8SKris Buschelman } 2731677d0b8SKris Buschelman 2741677d0b8SKris Buschelman #undef __FUNCT__ 275f0c56d0fSKris Buschelman #define __FUNCT__ "MatFactorInfo_UMFPACK" 2764b019bd2SJed Brown static PetscErrorCode MatFactorInfo_UMFPACK(Mat A,PetscViewer viewer) 2776849ba73SBarry Smith { 278f0c56d0fSKris Buschelman Mat_UMFPACK *lu= (Mat_UMFPACK*)A->spptr; 279dfbe8321SBarry Smith PetscErrorCode ierr; 280f0c56d0fSKris Buschelman 2811677d0b8SKris Buschelman PetscFunctionBegin; 2821677d0b8SKris Buschelman /* check if matrix is UMFPACK type */ 283f0c56d0fSKris Buschelman if (A->ops->solve != MatSolve_UMFPACK) PetscFunctionReturn(0); 2841677d0b8SKris Buschelman 2851677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer,"UMFPACK run parameters:\n");CHKERRQ(ierr); 2861677d0b8SKris Buschelman /* Control parameters used by reporting routiones */ 2871677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_PRL]: %g\n",lu->Control[UMFPACK_PRL]);CHKERRQ(ierr); 2881677d0b8SKris Buschelman 2891677d0b8SKris Buschelman /* Control parameters used by symbolic factorization */ 2900f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_STRATEGY]: %g\n",lu->Control[UMFPACK_STRATEGY]);CHKERRQ(ierr); 2911677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_DENSE_COL]: %g\n",lu->Control[UMFPACK_DENSE_COL]);CHKERRQ(ierr); 2921677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_DENSE_ROW]: %g\n",lu->Control[UMFPACK_DENSE_ROW]);CHKERRQ(ierr); 2930f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_AMD_DENSE]: %g\n",lu->Control[UMFPACK_AMD_DENSE]);CHKERRQ(ierr); 2941677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_BLOCK_SIZE]: %g\n",lu->Control[UMFPACK_BLOCK_SIZE]);CHKERRQ(ierr); 2950f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_FIXQ]: %g\n",lu->Control[UMFPACK_FIXQ]);CHKERRQ(ierr); 2960f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_AGGRESSIVE]: %g\n",lu->Control[UMFPACK_AGGRESSIVE]);CHKERRQ(ierr); 2971677d0b8SKris Buschelman 2981677d0b8SKris Buschelman /* Control parameters used by numeric factorization */ 2991677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_PIVOT_TOLERANCE]: %g\n",lu->Control[UMFPACK_PIVOT_TOLERANCE]);CHKERRQ(ierr); 3000f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_SYM_PIVOT_TOLERANCE]: %g\n",lu->Control[UMFPACK_SYM_PIVOT_TOLERANCE]);CHKERRQ(ierr); 3010f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_SCALE]: %g\n",lu->Control[UMFPACK_SCALE]);CHKERRQ(ierr); 3021677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_ALLOC_INIT]: %g\n",lu->Control[UMFPACK_ALLOC_INIT]);CHKERRQ(ierr); 3030f6efc10SHong Zhang ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_DROPTOL]: %g\n",lu->Control[UMFPACK_DROPTOL]);CHKERRQ(ierr); 3041677d0b8SKris Buschelman 3051677d0b8SKris Buschelman /* Control parameters used by solve */ 3061677d0b8SKris Buschelman ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_IRSTEP]: %g\n",lu->Control[UMFPACK_IRSTEP]);CHKERRQ(ierr); 3071677d0b8SKris Buschelman 3081677d0b8SKris Buschelman /* mat ordering */ 309fcfd50ebSBarry Smith if (!lu->PetscMatOrdering) { 310fcfd50ebSBarry Smith ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_ORDERING]: %s (not using the PETSc ordering)\n",UmfpackOrderingTypes[(int)lu->Control[UMFPACK_ORDERING]]);CHKERRQ(ierr); 311fcfd50ebSBarry Smith } 3121677d0b8SKris Buschelman PetscFunctionReturn(0); 3131677d0b8SKris Buschelman } 3141677d0b8SKris Buschelman 315d844382dSKris Buschelman #undef __FUNCT__ 316f0c56d0fSKris Buschelman #define __FUNCT__ "MatView_UMFPACK" 3174b019bd2SJed Brown static PetscErrorCode MatView_UMFPACK(Mat A,PetscViewer viewer) 3186849ba73SBarry Smith { 319dfbe8321SBarry Smith PetscErrorCode ierr; 320ace3abfcSBarry Smith PetscBool iascii; 321d844382dSKris Buschelman PetscViewerFormat format; 322d844382dSKris Buschelman 323d844382dSKris Buschelman PetscFunctionBegin; 324b24902e0SBarry Smith ierr = MatView_SeqAIJ(A,viewer);CHKERRQ(ierr); 325d844382dSKris Buschelman 326251f4c67SDmitry Karpeev ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr); 32732077d6dSBarry Smith if (iascii) { 328d844382dSKris Buschelman ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr); 3292f59403fSHong Zhang if (format == PETSC_VIEWER_ASCII_INFO) { 330f0c56d0fSKris Buschelman ierr = MatFactorInfo_UMFPACK(A,viewer);CHKERRQ(ierr); 331d844382dSKris Buschelman } 332d844382dSKris Buschelman } 333d844382dSKris Buschelman PetscFunctionReturn(0); 334d844382dSKris Buschelman } 335d844382dSKris Buschelman 33635bd34faSBarry Smith #undef __FUNCT__ 33735bd34faSBarry Smith #define __FUNCT__ "MatFactorGetSolverPackage_seqaij_umfpack" 33835bd34faSBarry Smith PetscErrorCode MatFactorGetSolverPackage_seqaij_umfpack(Mat A,const MatSolverPackage *type) 33935bd34faSBarry Smith { 34035bd34faSBarry Smith PetscFunctionBegin; 3412692d6eeSBarry Smith *type = MATSOLVERUMFPACK; 34235bd34faSBarry Smith PetscFunctionReturn(0); 34335bd34faSBarry Smith } 34435bd34faSBarry Smith 34535bd34faSBarry Smith 3462f71e704SKris Buschelman /*MC 3472692d6eeSBarry Smith MATSOLVERUMFPACK = "umfpack" - A matrix type providing direct solvers (LU) for sequential matrices 3482f71e704SKris Buschelman via the external package UMFPACK. 3492f71e704SKris Buschelman 350f02a4714SShri ./configure --download-suitesparse to install PETSc to use UMFPACK 3512f71e704SKris Buschelman 3522f71e704SKris Buschelman Consult UMFPACK documentation for more information about the Control parameters 3532f71e704SKris Buschelman which correspond to the options database keys below. 3542f71e704SKris Buschelman 3552f71e704SKris Buschelman Options Database Keys: 356ba41fbb6SBarry Smith + -mat_umfpack_ordering - CHOLMOD, AMD, GIVEN, METIS, BEST, NONE 357ba41fbb6SBarry Smith . -mat_umfpack_prl - UMFPACK print level: Control[UMFPACK_PRL] 358e08999f5SMatthew G Knepley . -mat_umfpack_strategy <AUTO> - (choose one of) AUTO UNSYMMETRIC SYMMETRIC 2BY2 3592f71e704SKris Buschelman . -mat_umfpack_dense_col <alpha_c> - UMFPACK dense column threshold: Control[UMFPACK_DENSE_COL] 360e08999f5SMatthew G Knepley . -mat_umfpack_dense_row <0.2> - Control[UMFPACK_DENSE_ROW] 361e08999f5SMatthew G Knepley . -mat_umfpack_amd_dense <10> - Control[UMFPACK_AMD_DENSE] 3622f71e704SKris Buschelman . -mat_umfpack_block_size <bs> - UMFPACK block size for BLAS-Level 3 calls: Control[UMFPACK_BLOCK_SIZE] 363e08999f5SMatthew G Knepley . -mat_umfpack_2by2_tolerance <0.01> - Control[UMFPACK_2BY2_TOLERANCE] 364e08999f5SMatthew G Knepley . -mat_umfpack_fixq <0> - Control[UMFPACK_FIXQ] 365e08999f5SMatthew G Knepley . -mat_umfpack_aggressive <1> - Control[UMFPACK_AGGRESSIVE] 3662f71e704SKris Buschelman . -mat_umfpack_pivot_tolerance <delta> - UMFPACK partial pivot tolerance: Control[UMFPACK_PIVOT_TOLERANCE] 367e08999f5SMatthew G Knepley . -mat_umfpack_sym_pivot_tolerance <0.001> - Control[UMFPACK_SYM_PIVOT_TOLERANCE] 368e08999f5SMatthew G Knepley . -mat_umfpack_scale <NONE> - (choose one of) NONE SUM MAX 3692f71e704SKris Buschelman . -mat_umfpack_alloc_init <delta> - UMFPACK factorized matrix allocation modifier: Control[UMFPACK_ALLOC_INIT] 370e08999f5SMatthew G Knepley . -mat_umfpack_droptol <0> - Control[UMFPACK_DROPTOL] 3712f71e704SKris Buschelman - -mat_umfpack_irstep <maxit> - UMFPACK maximum number of iterative refinement steps: Control[UMFPACK_IRSTEP] 3722f71e704SKris Buschelman 3732f71e704SKris Buschelman Level: beginner 374a364b7d2SBarry Smith 375a364b7d2SBarry Smith Note: UMFPACK is part of SuiteSparse http://faculty.cse.tamu.edu/davis/suitesparse.html 3762f71e704SKris Buschelman 377d45987f3SHong Zhang .seealso: PCLU, MATSOLVERSUPERLU, MATSOLVERMUMPS, PCFactorSetMatSolverPackage(), MatSolverPackage 3782f71e704SKris Buschelman M*/ 379b2573a8aSBarry Smith 3803519fcdcSHong Zhang #undef __FUNCT__ 3813519fcdcSHong Zhang #define __FUNCT__ "MatGetFactor_seqaij_umfpack" 3828cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatGetFactor_seqaij_umfpack(Mat A,MatFactorType ftype,Mat *F) 3833519fcdcSHong Zhang { 3843519fcdcSHong Zhang Mat B; 3853519fcdcSHong Zhang Mat_UMFPACK *lu; 3863519fcdcSHong Zhang PetscErrorCode ierr; 3878592901bSBarry Smith PetscInt m=A->rmap->n,n=A->cmap->n,idx; 3882f71e704SKris Buschelman 3892205254eSKarl Rupp const char *strategy[]={"AUTO","UNSYMMETRIC","SYMMETRIC"}; 3902205254eSKarl Rupp const char *scale[] ={"NONE","SUM","MAX"}; 391ace3abfcSBarry Smith PetscBool flg; 3922d4e2982SHong Zhang 3933519fcdcSHong Zhang PetscFunctionBegin; 3943519fcdcSHong Zhang /* Create the factorization matrix F */ 395ce94432eSBarry Smith ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr); 3963519fcdcSHong Zhang ierr = MatSetSizes(B,PETSC_DECIDE,PETSC_DECIDE,m,n);CHKERRQ(ierr); 3973519fcdcSHong Zhang ierr = MatSetType(B,((PetscObject)A)->type_name);CHKERRQ(ierr); 3980298fd71SBarry Smith ierr = MatSeqAIJSetPreallocation(B,0,NULL);CHKERRQ(ierr); 399b00a9115SJed Brown ierr = PetscNewLog(B,&lu);CHKERRQ(ierr); 4002205254eSKarl Rupp 4013519fcdcSHong Zhang B->spptr = lu; 4023519fcdcSHong Zhang B->ops->lufactorsymbolic = MatLUFactorSymbolic_UMFPACK; 4033519fcdcSHong Zhang B->ops->destroy = MatDestroy_UMFPACK; 4043519fcdcSHong Zhang B->ops->view = MatView_UMFPACK; 4052205254eSKarl Rupp 406bdf89e91SBarry Smith ierr = PetscObjectComposeFunction((PetscObject)B,"MatFactorGetSolverPackage_C",MatFactorGetSolverPackage_seqaij_umfpack);CHKERRQ(ierr); 4072205254eSKarl Rupp 408d5f3da31SBarry Smith B->factortype = MAT_FACTOR_LU; 4093519fcdcSHong Zhang B->assembled = PETSC_TRUE; /* required by -ksp_view */ 4103519fcdcSHong Zhang B->preallocated = PETSC_TRUE; 4113519fcdcSHong Zhang 4123519fcdcSHong Zhang /* initializations */ 4133519fcdcSHong Zhang /* ------------------------------------------------*/ 4143519fcdcSHong Zhang /* get the default control parameters */ 4158592901bSBarry Smith umfpack_UMF_defaults(lu->Control); 4160298fd71SBarry Smith lu->perm_c = NULL; /* use defaul UMFPACK col permutation */ 4173519fcdcSHong Zhang lu->Control[UMFPACK_IRSTEP] = 0; /* max num of iterative refinement steps to attempt */ 4183519fcdcSHong Zhang 419ce94432eSBarry Smith ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)A),((PetscObject)A)->prefix,"UMFPACK Options","Mat");CHKERRQ(ierr); 4203519fcdcSHong Zhang /* Control parameters used by reporting routiones */ 4210298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_prl","Control[UMFPACK_PRL]","None",lu->Control[UMFPACK_PRL],&lu->Control[UMFPACK_PRL],NULL);CHKERRQ(ierr); 4223519fcdcSHong Zhang 4233519fcdcSHong Zhang /* Control parameters for symbolic factorization */ 424fcfd50ebSBarry Smith ierr = PetscOptionsEList("-mat_umfpack_strategy","ordering and pivoting strategy","None",strategy,3,strategy[0],&idx,&flg);CHKERRQ(ierr); 4253519fcdcSHong Zhang if (flg) { 4263519fcdcSHong Zhang switch (idx) { 4273519fcdcSHong Zhang case 0: lu->Control[UMFPACK_STRATEGY] = UMFPACK_STRATEGY_AUTO; break; 4283519fcdcSHong Zhang case 1: lu->Control[UMFPACK_STRATEGY] = UMFPACK_STRATEGY_UNSYMMETRIC; break; 4293519fcdcSHong Zhang case 2: lu->Control[UMFPACK_STRATEGY] = UMFPACK_STRATEGY_SYMMETRIC; break; 4303519fcdcSHong Zhang } 4313519fcdcSHong Zhang } 4328caf3d72SBarry Smith ierr = PetscOptionsEList("-mat_umfpack_ordering","Internal ordering method","None",UmfpackOrderingTypes,sizeof(UmfpackOrderingTypes)/sizeof(UmfpackOrderingTypes[0]),UmfpackOrderingTypes[(int)lu->Control[UMFPACK_ORDERING]],&idx,&flg);CHKERRQ(ierr); 433fcfd50ebSBarry Smith if (flg) lu->Control[UMFPACK_ORDERING] = (int)idx; 4340298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_dense_col","Control[UMFPACK_DENSE_COL]","None",lu->Control[UMFPACK_DENSE_COL],&lu->Control[UMFPACK_DENSE_COL],NULL);CHKERRQ(ierr); 4350298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_dense_row","Control[UMFPACK_DENSE_ROW]","None",lu->Control[UMFPACK_DENSE_ROW],&lu->Control[UMFPACK_DENSE_ROW],NULL);CHKERRQ(ierr); 4360298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_amd_dense","Control[UMFPACK_AMD_DENSE]","None",lu->Control[UMFPACK_AMD_DENSE],&lu->Control[UMFPACK_AMD_DENSE],NULL);CHKERRQ(ierr); 4370298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_block_size","Control[UMFPACK_BLOCK_SIZE]","None",lu->Control[UMFPACK_BLOCK_SIZE],&lu->Control[UMFPACK_BLOCK_SIZE],NULL);CHKERRQ(ierr); 4380298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_fixq","Control[UMFPACK_FIXQ]","None",lu->Control[UMFPACK_FIXQ],&lu->Control[UMFPACK_FIXQ],NULL);CHKERRQ(ierr); 4390298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_aggressive","Control[UMFPACK_AGGRESSIVE]","None",lu->Control[UMFPACK_AGGRESSIVE],&lu->Control[UMFPACK_AGGRESSIVE],NULL);CHKERRQ(ierr); 4403519fcdcSHong Zhang 4413519fcdcSHong Zhang /* Control parameters used by numeric factorization */ 4420298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_pivot_tolerance","Control[UMFPACK_PIVOT_TOLERANCE]","None",lu->Control[UMFPACK_PIVOT_TOLERANCE],&lu->Control[UMFPACK_PIVOT_TOLERANCE],NULL);CHKERRQ(ierr); 4430298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_sym_pivot_tolerance","Control[UMFPACK_SYM_PIVOT_TOLERANCE]","None",lu->Control[UMFPACK_SYM_PIVOT_TOLERANCE],&lu->Control[UMFPACK_SYM_PIVOT_TOLERANCE],NULL);CHKERRQ(ierr); 4443519fcdcSHong Zhang ierr = PetscOptionsEList("-mat_umfpack_scale","Control[UMFPACK_SCALE]","None",scale,3,scale[0],&idx,&flg);CHKERRQ(ierr); 4453519fcdcSHong Zhang if (flg) { 4463519fcdcSHong Zhang switch (idx) { 4473519fcdcSHong Zhang case 0: lu->Control[UMFPACK_SCALE] = UMFPACK_SCALE_NONE; break; 4483519fcdcSHong Zhang case 1: lu->Control[UMFPACK_SCALE] = UMFPACK_SCALE_SUM; break; 4493519fcdcSHong Zhang case 2: lu->Control[UMFPACK_SCALE] = UMFPACK_SCALE_MAX; break; 4503519fcdcSHong Zhang } 4513519fcdcSHong Zhang } 4520298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_alloc_init","Control[UMFPACK_ALLOC_INIT]","None",lu->Control[UMFPACK_ALLOC_INIT],&lu->Control[UMFPACK_ALLOC_INIT],NULL);CHKERRQ(ierr); 4530298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_front_alloc_init","Control[UMFPACK_FRONT_ALLOC_INIT]","None",lu->Control[UMFPACK_FRONT_ALLOC_INIT],&lu->Control[UMFPACK_ALLOC_INIT],NULL);CHKERRQ(ierr); 4540298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_droptol","Control[UMFPACK_DROPTOL]","None",lu->Control[UMFPACK_DROPTOL],&lu->Control[UMFPACK_DROPTOL],NULL);CHKERRQ(ierr); 4553519fcdcSHong Zhang 4563519fcdcSHong Zhang /* Control parameters used by solve */ 4570298fd71SBarry Smith ierr = PetscOptionsReal("-mat_umfpack_irstep","Control[UMFPACK_IRSTEP]","None",lu->Control[UMFPACK_IRSTEP],&lu->Control[UMFPACK_IRSTEP],NULL);CHKERRQ(ierr); 4583519fcdcSHong Zhang 4593519fcdcSHong Zhang /* use Petsc mat ordering (note: size is for the transpose, and PETSc r = Umfpack perm_c) */ 4600298fd71SBarry Smith ierr = PetscOptionsHasName(NULL,"-pc_factor_mat_ordering_type",&lu->PetscMatOrdering);CHKERRQ(ierr); 4613519fcdcSHong Zhang PetscOptionsEnd(); 4623519fcdcSHong Zhang *F = B; 4633519fcdcSHong Zhang PetscFunctionReturn(0); 4643519fcdcSHong Zhang } 465b2573a8aSBarry Smith 46642c9c57cSBarry Smith PETSC_EXTERN PetscErrorCode MatGetFactor_seqaij_cholmod(Mat,MatFactorType,Mat*); 46742c9c57cSBarry Smith PETSC_EXTERN PetscErrorCode MatGetFactor_seqsbaij_cholmod(Mat,MatFactorType,Mat*); 46842c9c57cSBarry Smith PETSC_EXTERN PetscErrorCode MatGetFactor_seqaij_klu(Mat,MatFactorType,Mat*); 4692d4e2982SHong Zhang 47042c9c57cSBarry Smith #undef __FUNCT__ 47142c9c57cSBarry Smith #define __FUNCT__ "MatSolverPackageRegister_SuiteSparse" 47229b38603SBarry Smith PETSC_EXTERN PetscErrorCode MatSolverPackageRegister_SuiteSparse(void) 47342c9c57cSBarry Smith { 47442c9c57cSBarry Smith PetscErrorCode ierr; 47542c9c57cSBarry Smith 47642c9c57cSBarry Smith PetscFunctionBegin; 47742c9c57cSBarry Smith ierr = MatSolverPackageRegister(MATSOLVERUMFPACK,MATSEQAIJ, MAT_FACTOR_LU,MatGetFactor_seqaij_umfpack);CHKERRQ(ierr); 47842c9c57cSBarry Smith ierr = MatSolverPackageRegister(MATSOLVERCHOLMOD,MATSEQAIJ, MAT_FACTOR_CHOLESKY,MatGetFactor_seqaij_cholmod);CHKERRQ(ierr); 47942c9c57cSBarry Smith ierr = MatSolverPackageRegister(MATSOLVERCHOLMOD,MATSEQSBAIJ, MAT_FACTOR_CHOLESKY,MatGetFactor_seqsbaij_cholmod);CHKERRQ(ierr); 48042c9c57cSBarry Smith ierr = MatSolverPackageRegister(MATSOLVERKLU,MATSEQAIJ, MAT_FACTOR_LU,MatGetFactor_seqaij_klu);CHKERRQ(ierr); 48142c9c57cSBarry Smith PetscFunctionReturn(0); 48242c9c57cSBarry Smith } 483