xref: /petsc/src/mat/impls/baij/mpi/mpibaij.c (revision 8a8e0b3aa6734b05cd88677becbdcc98d7dc465d)

#include "src/mat/impls/baij/mpi/mpibaij.h"   /*I  "petscmat.h"  I*/

EXTERN PetscErrorCode MatSetUpMultiply_MPIBAIJ(Mat);
EXTERN PetscErrorCode DisAssemble_MPIBAIJ(Mat);
EXTERN PetscErrorCode MatIncreaseOverlap_MPIBAIJ(Mat,PetscInt,IS[],PetscInt);
EXTERN PetscErrorCode MatGetSubMatrices_MPIBAIJ(Mat,PetscInt,const IS[],const IS[],MatReuse,Mat *[]);
EXTERN PetscErrorCode MatGetValues_SeqBAIJ(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt [],PetscScalar []);
EXTERN PetscErrorCode MatSetValues_SeqBAIJ(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt [],const PetscScalar [],InsertMode);
EXTERN PetscErrorCode MatSetValuesBlocked_SeqBAIJ(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt[],const PetscScalar[],InsertMode);
EXTERN PetscErrorCode MatGetRow_SeqBAIJ(Mat,PetscInt,PetscInt*,PetscInt*[],PetscScalar*[]);
EXTERN PetscErrorCode MatRestoreRow_SeqBAIJ(Mat,PetscInt,PetscInt*,PetscInt*[],PetscScalar*[]);
EXTERN PetscErrorCode MatPrintHelp_SeqBAIJ(Mat);
EXTERN PetscErrorCode MatZeroRows_SeqBAIJ(Mat,IS,const PetscScalar*);

/*  UGLY, ugly, ugly
   When MatScalar == PetscScalar the function MatSetValuesBlocked_MPIBAIJ_MatScalar() does
   not exist. Otherwise ..._MatScalar() takes matrix elements in single precision and
   inserts them into the single precision data structure. The function MatSetValuesBlocked_MPIBAIJ()
   converts the entries into single precision and then calls ..._MatScalar() to put them
   into the single precision data structures.
*/
#if defined(PETSC_USE_MAT_SINGLE)
EXTERN PetscErrorCode MatSetValuesBlocked_SeqBAIJ_MatScalar(Mat,PetscInt,const PetscInt*,PetscInt,const PetscInt*,const MatScalar*,InsertMode);
EXTERN PetscErrorCode MatSetValues_MPIBAIJ_MatScalar(Mat,PetscInt,const PetscInt*,PetscInt,const PetscInt*,const MatScalar*,InsertMode);
EXTERN PetscErrorCode MatSetValuesBlocked_MPIBAIJ_MatScalar(Mat,PetscInt,const PetscInt*,PetscInt,const PetscInt*,const MatScalar*,InsertMode);
EXTERN PetscErrorCode MatSetValues_MPIBAIJ_HT_MatScalar(Mat,PetscInt,const PetscInt*,PetscInt,const PetscInt*,const MatScalar*,InsertMode);
EXTERN PetscErrorCode MatSetValuesBlocked_MPIBAIJ_HT_MatScalar(Mat,PetscInt,const PetscInt*,PetscInt,const PetscInt*,const MatScalar*,InsertMode);
#else
#define MatSetValuesBlocked_SeqBAIJ_MatScalar      MatSetValuesBlocked_SeqBAIJ
#define MatSetValues_MPIBAIJ_MatScalar             MatSetValues_MPIBAIJ
#define MatSetValuesBlocked_MPIBAIJ_MatScalar      MatSetValuesBlocked_MPIBAIJ
#define MatSetValues_MPIBAIJ_HT_MatScalar          MatSetValues_MPIBAIJ_HT
#define MatSetValuesBlocked_MPIBAIJ_HT_MatScalar   MatSetValuesBlocked_MPIBAIJ_HT
#endif

#undef __FUNCT__
#define __FUNCT__ "MatGetRowMax_MPIBAIJ"
PetscErrorCode MatGetRowMax_MPIBAIJ(Mat A,Vec v)
{
  Mat_MPIBAIJ    *a = (Mat_MPIBAIJ*)A->data;
  PetscErrorCode ierr;
  PetscInt       i;
  PetscScalar    *va,*vb;
  Vec            vtmp;

  PetscFunctionBegin;

  ierr = MatGetRowMax(a->A,v);CHKERRQ(ierr);
  ierr = VecGetArray(v,&va);CHKERRQ(ierr);

  ierr = VecCreateSeq(PETSC_COMM_SELF,A->m,&vtmp);CHKERRQ(ierr);
  ierr = MatGetRowMax(a->B,vtmp);CHKERRQ(ierr);
  ierr = VecGetArray(vtmp,&vb);CHKERRQ(ierr);

  for (i=0; i<A->m; i++){
    if (PetscAbsScalar(va[i]) < PetscAbsScalar(vb[i])) va[i] = vb[i];
  }

  ierr = VecRestoreArray(v,&va);CHKERRQ(ierr);
  ierr = VecRestoreArray(vtmp,&vb);CHKERRQ(ierr);
  ierr = VecDestroy(vtmp);CHKERRQ(ierr);

  PetscFunctionReturn(0);
}

EXTERN_C_BEGIN
#undef __FUNCT__
#define __FUNCT__ "MatStoreValues_MPIBAIJ"
PetscErrorCode MatStoreValues_MPIBAIJ(Mat mat)
{
  Mat_MPIBAIJ    *aij = (Mat_MPIBAIJ *)mat->data;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  ierr = MatStoreValues(aij->A);CHKERRQ(ierr);
  ierr = MatStoreValues(aij->B);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}
EXTERN_C_END

EXTERN_C_BEGIN
#undef __FUNCT__
#define __FUNCT__ "MatRetrieveValues_MPIBAIJ"
PetscErrorCode MatRetrieveValues_MPIBAIJ(Mat mat)
{
  Mat_MPIBAIJ    *aij = (Mat_MPIBAIJ *)mat->data;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  ierr = MatRetrieveValues(aij->A);CHKERRQ(ierr);
  ierr = MatRetrieveValues(aij->B);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}
EXTERN_C_END

/*
     Local utility routine that creates a mapping from the global column
   number to the local number in the off-diagonal part of the local
   storage of the matrix.  This is done in a non scable way since the
   length of colmap equals the global matrix length.
*/
#undef __FUNCT__
#define __FUNCT__ "CreateColmap_MPIBAIJ_Private"
PetscErrorCode CreateColmap_MPIBAIJ_Private(Mat mat)
{
  Mat_MPIBAIJ    *baij = (Mat_MPIBAIJ*)mat->data;
  Mat_SeqBAIJ    *B = (Mat_SeqBAIJ*)baij->B->data;
  PetscErrorCode ierr;
  PetscInt       nbs = B->nbs,i,bs=mat->bs;

  PetscFunctionBegin;
#if defined (PETSC_USE_CTABLE)
  ierr = PetscTableCreate(baij->nbs,&baij->colmap);CHKERRQ(ierr);
  for (i=0; i<nbs; i++){
    ierr = PetscTableAdd(baij->colmap,baij->garray[i]+1,i*bs+1);CHKERRQ(ierr);
  }
#else
  ierr = PetscMalloc((baij->Nbs+1)*sizeof(PetscInt),&baij->colmap);CHKERRQ(ierr);
  PetscLogObjectMemory(mat,baij->Nbs*sizeof(PetscInt));
  ierr = PetscMemzero(baij->colmap,baij->Nbs*sizeof(PetscInt));CHKERRQ(ierr);
  for (i=0; i<nbs; i++) baij->colmap[baij->garray[i]] = i*bs+1;
#endif
  PetscFunctionReturn(0);
}

#define CHUNKSIZE  10

#define  MatSetValues_SeqBAIJ_A_Private(row,col,value,addv) \
{ \
 \
    brow = row/bs;  \
    rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
    rmax = aimax[brow]; nrow = ailen[brow]; \
      bcol = col/bs; \
      ridx = row % bs; cidx = col % bs; \
      low = 0; high = nrow; \
      while (high-low > 3) { \
        t = (low+high)/2; \
        if (rp[t] > bcol) high = t; \
        else              low  = t; \
      } \
      for (_i=low; _i<high; _i++) { \
        if (rp[_i] > bcol) break; \
        if (rp[_i] == bcol) { \
          bap  = ap +  bs2*_i + bs*cidx + ridx; \
          if (addv == ADD_VALUES) *bap += value;  \
          else                    *bap  = value;  \
          goto a_noinsert; \
        } \
      } \
      if (a->nonew == 1) goto a_noinsert; \
      else if (a->nonew == -1) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero (%D, %D) into matrix", row, col); \
      if (nrow >= rmax) { \
        /* there is no extra room in row, therefore enlarge */ \
        PetscInt       new_nz = ai[a->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
        MatScalar *new_a; \
 \
        if (a->nonew == -2) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero (%D, %D) in the matrix", row, col); \
 \
        /* malloc new storage space */ \
        len     = new_nz*(sizeof(PetscInt)+bs2*sizeof(MatScalar))+(a->mbs+1)*sizeof(PetscInt); \
        ierr = PetscMalloc(len,&new_a);CHKERRQ(ierr); \
        new_j   = (PetscInt*)(new_a + bs2*new_nz); \
        new_i   = new_j + new_nz; \
 \
        /* copy over old data into new slots */ \
        for (ii=0; ii<brow+1; ii++) {new_i[ii] = ai[ii];} \
        for (ii=brow+1; ii<a->mbs+1; ii++) {new_i[ii] = ai[ii]+CHUNKSIZE;} \
        ierr = PetscMemcpy(new_j,aj,(ai[brow]+nrow)*sizeof(PetscInt));CHKERRQ(ierr); \
        len = (new_nz - CHUNKSIZE - ai[brow] - nrow); \
        ierr = PetscMemcpy(new_j+ai[brow]+nrow+CHUNKSIZE,aj+ai[brow]+nrow,len*sizeof(PetscInt));CHKERRQ(ierr); \
        ierr = PetscMemcpy(new_a,aa,(ai[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
        ierr = PetscMemzero(new_a+bs2*(ai[brow]+nrow),bs2*CHUNKSIZE*sizeof(PetscScalar));CHKERRQ(ierr); \
        ierr = PetscMemcpy(new_a+bs2*(ai[brow]+nrow+CHUNKSIZE), \
                    aa+bs2*(ai[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
        /* free up old matrix storage */ \
        ierr = PetscFree(a->a);CHKERRQ(ierr);  \
        if (!a->singlemalloc) { \
          ierr = PetscFree(a->i);CHKERRQ(ierr); \
          ierr = PetscFree(a->j);CHKERRQ(ierr);\
        } \
        aa = a->a = new_a; ai = a->i = new_i; aj = a->j = new_j;  \
        a->singlemalloc = PETSC_TRUE; \
 \
        rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
        rmax = aimax[brow] = aimax[brow] + CHUNKSIZE; \
        PetscLogObjectMemory(A,CHUNKSIZE*(sizeof(PetscInt) + bs2*sizeof(MatScalar))); \
        a->maxnz += bs2*CHUNKSIZE; \
        a->reallocs++; \
        a->nz++; \
      } \
      N = nrow++ - 1;  \
      /* shift up all the later entries in this row */ \
      for (ii=N; ii>=_i; ii--) { \
        rp[ii+1] = rp[ii]; \
        ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
      } \
      if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr); }  \
      rp[_i]                      = bcol;  \
      ap[bs2*_i + bs*cidx + ridx] = value;  \
      a_noinsert:; \
    ailen[brow] = nrow; \
}

#define  MatSetValues_SeqBAIJ_B_Private(row,col,value,addv) \
{ \
    brow = row/bs;  \
    rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
    rmax = bimax[brow]; nrow = bilen[brow]; \
      bcol = col/bs; \
      ridx = row % bs; cidx = col % bs; \
      low = 0; high = nrow; \
      while (high-low > 3) { \
        t = (low+high)/2; \
        if (rp[t] > bcol) high = t; \
        else              low  = t; \
      } \
      for (_i=low; _i<high; _i++) { \
        if (rp[_i] > bcol) break; \
        if (rp[_i] == bcol) { \
          bap  = ap +  bs2*_i + bs*cidx + ridx; \
          if (addv == ADD_VALUES) *bap += value;  \
          else                    *bap  = value;  \
          goto b_noinsert; \
        } \
      } \
      if (b->nonew == 1) goto b_noinsert; \
      else if (b->nonew == -1) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero (%D, %D) into matrix", row, col); \
      if (nrow >= rmax) { \
        /* there is no extra room in row, therefore enlarge */ \
        PetscInt       new_nz = bi[b->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
        MatScalar *new_a; \
 \
        if (b->nonew == -2) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero (%D, %D) in the matrix", row, col); \
 \
        /* malloc new storage space */ \
        len     = new_nz*(sizeof(PetscInt)+bs2*sizeof(MatScalar))+(b->mbs+1)*sizeof(PetscInt); \
        ierr    = PetscMalloc(len,&new_a);CHKERRQ(ierr); \
        new_j   = (PetscInt*)(new_a + bs2*new_nz); \
        new_i   = new_j + new_nz; \
 \
        /* copy over old data into new slots */ \
        for (ii=0; ii<brow+1; ii++) {new_i[ii] = bi[ii];} \
        for (ii=brow+1; ii<b->mbs+1; ii++) {new_i[ii] = bi[ii]+CHUNKSIZE;} \
        ierr = PetscMemcpy(new_j,bj,(bi[brow]+nrow)*sizeof(PetscInt));CHKERRQ(ierr); \
        len  = (new_nz - CHUNKSIZE - bi[brow] - nrow); \
        ierr = PetscMemcpy(new_j+bi[brow]+nrow+CHUNKSIZE,bj+bi[brow]+nrow,len*sizeof(PetscInt));CHKERRQ(ierr); \
        ierr = PetscMemcpy(new_a,ba,(bi[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
        ierr = PetscMemzero(new_a+bs2*(bi[brow]+nrow),bs2*CHUNKSIZE*sizeof(MatScalar));CHKERRQ(ierr); \
        ierr = PetscMemcpy(new_a+bs2*(bi[brow]+nrow+CHUNKSIZE), \
                    ba+bs2*(bi[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
        /* free up old matrix storage */ \
        ierr = PetscFree(b->a);CHKERRQ(ierr);  \
        if (!b->singlemalloc) { \
          ierr = PetscFree(b->i);CHKERRQ(ierr); \
          ierr = PetscFree(b->j);CHKERRQ(ierr); \
        } \
        ba = b->a = new_a; bi = b->i = new_i; bj = b->j = new_j;  \
        b->singlemalloc = PETSC_TRUE; \
 \
        rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
        rmax = bimax[brow] = bimax[brow] + CHUNKSIZE; \
        PetscLogObjectMemory(B,CHUNKSIZE*(sizeof(PetscInt) + bs2*sizeof(MatScalar))); \
        b->maxnz += bs2*CHUNKSIZE; \
        b->reallocs++; \
        b->nz++; \
      } \
      N = nrow++ - 1;  \
      /* shift up all the later entries in this row */ \
      for (ii=N; ii>=_i; ii--) { \
        rp[ii+1] = rp[ii]; \
        ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
      } \
      if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr);}  \
      rp[_i]                      = bcol;  \
      ap[bs2*_i + bs*cidx + ridx] = value;  \
      b_noinsert:; \
    bilen[brow] = nrow; \
}

#if defined(PETSC_USE_MAT_SINGLE)
#undef __FUNCT__
#define __FUNCT__ "MatSetValues_MPIBAIJ"
PetscErrorCode MatSetValues_MPIBAIJ(Mat mat,PetscInt m,const PetscInt im[],PetscInt n,const PetscInt in[],const PetscScalar v[],InsertMode addv)
{
  Mat_MPIBAIJ    *b = (Mat_MPIBAIJ*)mat->data;
  PetscErrorCode ierr;
  PetscInt       i,N = m*n;
  MatScalar      *vsingle;

  PetscFunctionBegin;
  if (N > b->setvalueslen) {
    if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
    ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
    b->setvalueslen  = N;
  }
  vsingle = b->setvaluescopy;

  for (i=0; i<N; i++) {
    vsingle[i] = v[i];
  }
  ierr = MatSetValues_MPIBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatSetValuesBlocked_MPIBAIJ"
PetscErrorCode MatSetValuesBlocked_MPIBAIJ(Mat mat,PetscInt m,const PetscInt im[],PetscInt n,const PetscInt in[],const PetscScalar v[],InsertMode addv)
{
  Mat_MPIBAIJ    *b = (Mat_MPIBAIJ*)mat->data;
  PetscErrorCode ierr;
  PetscInt       i,N = m*n*b->bs2;
  MatScalar      *vsingle;

  PetscFunctionBegin;
  if (N > b->setvalueslen) {
    if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
    ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
    b->setvalueslen  = N;
  }
  vsingle = b->setvaluescopy;
  for (i=0; i<N; i++) {
    vsingle[i] = v[i];
  }
  ierr = MatSetValuesBlocked_MPIBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatSetValues_MPIBAIJ_HT"
PetscErrorCode MatSetValues_MPIBAIJ_HT(Mat mat,PetscInt m,const PetscInt im[],PetscInt n,const PetscInt in[],const PetscScalar v[],InsertMode addv)
{
  Mat_MPIBAIJ    *b = (Mat_MPIBAIJ*)mat->data;
  PetscErrorCode ierr;
  PetscInt       i,N = m*n;
  MatScalar      *vsingle;

  PetscFunctionBegin;
  if (N > b->setvalueslen) {
    if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
    ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
    b->setvalueslen  = N;
  }
  vsingle = b->setvaluescopy;
  for (i=0; i<N; i++) {
    vsingle[i] = v[i];
  }
  ierr = MatSetValues_MPIBAIJ_HT_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatSetValuesBlocked_MPIBAIJ_HT"
PetscErrorCode MatSetValuesBlocked_MPIBAIJ_HT(Mat mat,PetscInt m,const PetscInt im[],PetscInt n,const PetscInt in[],const PetscScalar v[],InsertMode addv)
{
  Mat_MPIBAIJ    *b = (Mat_MPIBAIJ*)mat->data;
  PetscErrorCode ierr;
  PetscInt       i,N = m*n*b->bs2;
  MatScalar      *vsingle;

  PetscFunctionBegin;
  if (N > b->setvalueslen) {
    if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
    ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
    b->setvalueslen  = N;
  }
  vsingle = b->setvaluescopy;
  for (i=0; i<N; i++) {
    vsingle[i] = v[i];
  }
  ierr = MatSetValuesBlocked_MPIBAIJ_HT_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}
#endif

#undef __FUNCT__
#define __FUNCT__ "MatSetValues_MPIBAIJ_MatScalar"
PetscErrorCode MatSetValues_MPIBAIJ_MatScalar(Mat mat,PetscInt m,const PetscInt im[],PetscInt n,const PetscInt in[],const MatScalar v[],InsertMode addv)
{
  Mat_MPIBAIJ    *baij = (Mat_MPIBAIJ*)mat->data;
  MatScalar      value;
  PetscTruth     roworiented = baij->roworiented;
  PetscErrorCode ierr;
  PetscInt       i,j,row,col;
  PetscInt       rstart_orig=baij->rstart_bs;
  PetscInt       rend_orig=baij->rend_bs,cstart_orig=baij->cstart_bs;
  PetscInt       cend_orig=baij->cend_bs,bs=mat->bs;

  /* Some Variables required in the macro */
  Mat            A = baij->A;
  Mat_SeqBAIJ    *a = (Mat_SeqBAIJ*)(A)->data;
  PetscInt       *aimax=a->imax,*ai=a->i,*ailen=a->ilen,*aj=a->j;
  MatScalar      *aa=a->a;

  Mat            B = baij->B;
  Mat_SeqBAIJ    *b = (Mat_SeqBAIJ*)(B)->data;
  PetscInt       *bimax=b->imax,*bi=b->i,*bilen=b->ilen,*bj=b->j;
  MatScalar      *ba=b->a;

  PetscInt       *rp,ii,nrow,_i,rmax,N,brow,bcol;
  PetscInt       low,high,t,ridx,cidx,bs2=a->bs2;
  MatScalar      *ap,*bap;

  PetscFunctionBegin;
  for (i=0; i<m; i++) {
    if (im[i] < 0) continue;
#if defined(PETSC_USE_BOPT_g)
    if (im[i] >= mat->M) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Row too large: row %D max %D",im[i],mat->M-1);
#endif
    if (im[i] >= rstart_orig && im[i] < rend_orig) {
      row = im[i] - rstart_orig;
      for (j=0; j<n; j++) {
        if (in[j] >= cstart_orig && in[j] < cend_orig){
          col = in[j] - cstart_orig;
          if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
          MatSetValues_SeqBAIJ_A_Private(row,col,value,addv);
          /* ierr = MatSetValues_SeqBAIJ(baij->A,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
        } else if (in[j] < 0) continue;
#if defined(PETSC_USE_BOPT_g)
        else if (in[j] >= mat->N) {SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Column too large: col %D max %D",in[i],mat->N-1);}
#endif
        else {
          if (mat->was_assembled) {
            if (!baij->colmap) {
              ierr = CreateColmap_MPIBAIJ_Private(mat);CHKERRQ(ierr);
            }
#if defined (PETSC_USE_CTABLE)
            ierr = PetscTableFind(baij->colmap,in[j]/bs + 1,&col);CHKERRQ(ierr);
            col  = col - 1;
#else
            col = baij->colmap[in[j]/bs] - 1;
#endif
            if (col < 0 && !((Mat_SeqBAIJ*)(baij->A->data))->nonew) {
              ierr = DisAssemble_MPIBAIJ(mat);CHKERRQ(ierr);
              col =  in[j];
              /* Reinitialize the variables required by MatSetValues_SeqBAIJ_B_Private() */
              B = baij->B;
              b = (Mat_SeqBAIJ*)(B)->data;
              bimax=b->imax;bi=b->i;bilen=b->ilen;bj=b->j;
              ba=b->a;
            } else col += in[j]%bs;
          } else col = in[j];
          if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
          MatSetValues_SeqBAIJ_B_Private(row,col,value,addv);
          /* ierr = MatSetValues_SeqBAIJ(baij->B,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
        }
      }
    } else {
      if (!baij->donotstash) {
        if (roworiented) {
          ierr = MatStashValuesRow_Private(&mat->stash,im[i],n,in,v+i*n);CHKERRQ(ierr);
        } else {
          ierr = MatStashValuesCol_Private(&mat->stash,im[i],n,in,v+i,m);CHKERRQ(ierr);
        }
      }
    }
  }
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatSetValuesBlocked_MPIBAIJ_MatScalar"
PetscErrorCode MatSetValuesBlocked_MPIBAIJ_MatScalar(Mat mat,PetscInt m,const PetscInt im[],PetscInt n,const PetscInt in[],const MatScalar v[],InsertMode addv)
{
  Mat_MPIBAIJ     *baij = (Mat_MPIBAIJ*)mat->data;
  const MatScalar *value;
  MatScalar       *barray=baij->barray;
  PetscTruth      roworiented = baij->roworiented;
  PetscErrorCode  ierr;
  PetscInt        i,j,ii,jj,row,col,rstart=baij->rstart;
  PetscInt        rend=baij->rend,cstart=baij->cstart,stepval;
  PetscInt        cend=baij->cend,bs=mat->bs,bs2=baij->bs2;

  PetscFunctionBegin;
  if(!barray) {
    ierr         = PetscMalloc(bs2*sizeof(MatScalar),&barray);CHKERRQ(ierr);
    baij->barray = barray;
  }

  if (roworiented) {
    stepval = (n-1)*bs;
  } else {
    stepval = (m-1)*bs;
  }
  for (i=0; i<m; i++) {
    if (im[i] < 0) continue;
#if defined(PETSC_USE_BOPT_g)
    if (im[i] >= baij->Mbs) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Row too large, row %D max %D",im[i],baij->Mbs-1);
#endif
    if (im[i] >= rstart && im[i] < rend) {
      row = im[i] - rstart;
      for (j=0; j<n; j++) {
        /* If NumCol = 1 then a copy is not required */
        if ((roworiented) && (n == 1)) {
          barray = (MatScalar*)v + i*bs2;
        } else if((!roworiented) && (m == 1)) {
          barray = (MatScalar*)v + j*bs2;
        } else { /* Here a copy is required */
          if (roworiented) {
            value = v + i*(stepval+bs)*bs + j*bs;
          } else {
            value = v + j*(stepval+bs)*bs + i*bs;
          }
          for (ii=0; ii<bs; ii++,value+=stepval) {
            for (jj=0; jj<bs; jj++) {
              *barray++  = *value++;
            }
          }
          barray -=bs2;
        }

        if (in[j] >= cstart && in[j] < cend){
          col  = in[j] - cstart;
          ierr = MatSetValuesBlocked_SeqBAIJ_MatScalar(baij->A,1,&row,1,&col,barray,addv);CHKERRQ(ierr);
        }
        else if (in[j] < 0) continue;
#if defined(PETSC_USE_BOPT_g)
        else if (in[j] >= baij->Nbs) {SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Column too large, col %D max %D",in[j],baij->Nbs-1);}
#endif
        else {
          if (mat->was_assembled) {
            if (!baij->colmap) {
              ierr = CreateColmap_MPIBAIJ_Private(mat);CHKERRQ(ierr);
            }

#if defined(PETSC_USE_BOPT_g)
#if defined (PETSC_USE_CTABLE)
            { PetscInt data;
              ierr = PetscTableFind(baij->colmap,in[j]+1,&data);CHKERRQ(ierr);
              if ((data - 1) % bs) SETERRQ(PETSC_ERR_PLIB,"Incorrect colmap");
            }
#else
            if ((baij->colmap[in[j]] - 1) % bs) SETERRQ(PETSC_ERR_PLIB,"Incorrect colmap");
#endif
#endif
#if defined (PETSC_USE_CTABLE)
	    ierr = PetscTableFind(baij->colmap,in[j]+1,&col);CHKERRQ(ierr);
            col  = (col - 1)/bs;
#else
            col = (baij->colmap[in[j]] - 1)/bs;
#endif
            if (col < 0 && !((Mat_SeqBAIJ*)(baij->A->data))->nonew) {
              ierr = DisAssemble_MPIBAIJ(mat);CHKERRQ(ierr);
              col =  in[j];
            }
          }
          else col = in[j];
          ierr = MatSetValuesBlocked_SeqBAIJ_MatScalar(baij->B,1,&row,1,&col,barray,addv);CHKERRQ(ierr);
        }
      }
    } else {
      if (!baij->donotstash) {
        if (roworiented) {
          ierr = MatStashValuesRowBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr);
        } else {
          ierr = MatStashValuesColBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr);
        }
      }
    }
  }
  PetscFunctionReturn(0);
}

#define HASH_KEY 0.6180339887
#define HASH(size,key,tmp) (tmp = (key)*HASH_KEY,(PetscInt)((size)*(tmp-(PetscInt)tmp)))
/* #define HASH(size,key) ((PetscInt)((size)*fmod(((key)*HASH_KEY),1))) */
/* #define HASH(size,key,tmp) ((PetscInt)((size)*fmod(((key)*HASH_KEY),1))) */
#undef __FUNCT__
#define __FUNCT__ "MatSetValues_MPIBAIJ_HT_MatScalar"
PetscErrorCode MatSetValues_MPIBAIJ_HT_MatScalar(Mat mat,PetscInt m,const PetscInt im[],PetscInt n,const PetscInt in[],const MatScalar v[],InsertMode addv)
{
  Mat_MPIBAIJ    *baij = (Mat_MPIBAIJ*)mat->data;
  PetscTruth     roworiented = baij->roworiented;
  PetscErrorCode ierr;
  PetscInt       i,j,row,col;
  PetscInt       rstart_orig=baij->rstart_bs;
  PetscInt       rend_orig=baij->rend_bs,Nbs=baij->Nbs;
  PetscInt       h1,key,size=baij->ht_size,bs=mat->bs,*HT=baij->ht,idx;
  PetscReal      tmp;
  MatScalar      **HD = baij->hd,value;
#if defined(PETSC_USE_BOPT_g)
  PetscInt       total_ct=baij->ht_total_ct,insert_ct=baij->ht_insert_ct;
#endif

  PetscFunctionBegin;

  for (i=0; i<m; i++) {
#if defined(PETSC_USE_BOPT_g)
    if (im[i] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative row");
    if (im[i] >= mat->M) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Row too large: row %D max %D",im[i],mat->M-1);
#endif
      row = im[i];
    if (row >= rstart_orig && row < rend_orig) {
      for (j=0; j<n; j++) {
        col = in[j];
        if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
        /* Look up PetscInto the Hash Table */
        key = (row/bs)*Nbs+(col/bs)+1;
        h1  = HASH(size,key,tmp);


        idx = h1;
#if defined(PETSC_USE_BOPT_g)
        insert_ct++;
        total_ct++;
        if (HT[idx] != key) {
          for (idx=h1; (idx<size) && (HT[idx]!=key); idx++,total_ct++);
          if (idx == size) {
            for (idx=0; (idx<h1) && (HT[idx]!=key); idx++,total_ct++);
            if (idx == h1) {
              SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"(%D,%D) has no entry in the hash table", row, col);
            }
          }
        }
#else
        if (HT[idx] != key) {
          for (idx=h1; (idx<size) && (HT[idx]!=key); idx++);
          if (idx == size) {
            for (idx=0; (idx<h1) && (HT[idx]!=key); idx++);
            if (idx == h1) {
              SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"(%D,%D) has no entry in the hash table", row, col);
            }
          }
        }
#endif
        /* A HASH table entry is found, so insert the values at the correct address */
        if (addv == ADD_VALUES) *(HD[idx]+ (col % bs)*bs + (row % bs)) += value;
        else                    *(HD[idx]+ (col % bs)*bs + (row % bs))  = value;
      }
    } else {
      if (!baij->donotstash) {
        if (roworiented) {
          ierr = MatStashValuesRow_Private(&mat->stash,im[i],n,in,v+i*n);CHKERRQ(ierr);
        } else {
          ierr = MatStashValuesCol_Private(&mat->stash,im[i],n,in,v+i,m);CHKERRQ(ierr);
        }
      }
    }
  }
#if defined(PETSC_USE_BOPT_g)
  baij->ht_total_ct = total_ct;
  baij->ht_insert_ct = insert_ct;
#endif
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatSetValuesBlocked_MPIBAIJ_HT_MatScalar"
PetscErrorCode MatSetValuesBlocked_MPIBAIJ_HT_MatScalar(Mat mat,PetscInt m,const PetscInt im[],PetscInt n,const PetscInt in[],const MatScalar v[],InsertMode addv)
{
  Mat_MPIBAIJ     *baij = (Mat_MPIBAIJ*)mat->data;
  PetscTruth      roworiented = baij->roworiented;
  PetscErrorCode  ierr;
  PetscInt        i,j,ii,jj,row,col;
  PetscInt        rstart=baij->rstart ;
  PetscInt        rend=baij->rend,stepval,bs=mat->bs,bs2=baij->bs2;
  PetscInt        h1,key,size=baij->ht_size,idx,*HT=baij->ht,Nbs=baij->Nbs;
  PetscReal       tmp;
  MatScalar       **HD = baij->hd,*baij_a;
  const MatScalar *v_t,*value;
#if defined(PETSC_USE_BOPT_g)
  PetscInt        total_ct=baij->ht_total_ct,insert_ct=baij->ht_insert_ct;
#endif

  PetscFunctionBegin;

  if (roworiented) {
    stepval = (n-1)*bs;
  } else {
    stepval = (m-1)*bs;
  }
  for (i=0; i<m; i++) {
#if defined(PETSC_USE_BOPT_g)
    if (im[i] < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"Negative row: %D",im[i]);
    if (im[i] >= baij->Mbs) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Row too large: row %D max %D",im[i],baij->Mbs-1);
#endif
    row   = im[i];
    v_t   = v + i*bs2;
    if (row >= rstart && row < rend) {
      for (j=0; j<n; j++) {
        col = in[j];

        /* Look up into the Hash Table */
        key = row*Nbs+col+1;
        h1  = HASH(size,key,tmp);

        idx = h1;
#if defined(PETSC_USE_BOPT_g)
        total_ct++;
        insert_ct++;
       if (HT[idx] != key) {
          for (idx=h1; (idx<size) && (HT[idx]!=key); idx++,total_ct++);
          if (idx == size) {
            for (idx=0; (idx<h1) && (HT[idx]!=key); idx++,total_ct++);
            if (idx == h1) {
              SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"(%D,%D) has no entry in the hash table", row, col);
            }
          }
        }
#else
        if (HT[idx] != key) {
          for (idx=h1; (idx<size) && (HT[idx]!=key); idx++);
          if (idx == size) {
            for (idx=0; (idx<h1) && (HT[idx]!=key); idx++);
            if (idx == h1) {
              SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"(%D,%D) has no entry in the hash table", row, col);
            }
          }
        }
#endif
        baij_a = HD[idx];
        if (roworiented) {
          /*value = v + i*(stepval+bs)*bs + j*bs;*/
          /* value = v + (i*(stepval+bs)+j)*bs; */
          value = v_t;
          v_t  += bs;
          if (addv == ADD_VALUES) {
            for (ii=0; ii<bs; ii++,value+=stepval) {
              for (jj=ii; jj<bs2; jj+=bs) {
                baij_a[jj]  += *value++;
              }
            }
          } else {
            for (ii=0; ii<bs; ii++,value+=stepval) {
              for (jj=ii; jj<bs2; jj+=bs) {
                baij_a[jj]  = *value++;
              }
            }
          }
        } else {
          value = v + j*(stepval+bs)*bs + i*bs;
          if (addv == ADD_VALUES) {
            for (ii=0; ii<bs; ii++,value+=stepval,baij_a+=bs) {
              for (jj=0; jj<bs; jj++) {
                baij_a[jj]  += *value++;
              }
            }
          } else {
            for (ii=0; ii<bs; ii++,value+=stepval,baij_a+=bs) {
              for (jj=0; jj<bs; jj++) {
                baij_a[jj]  = *value++;
              }
            }
          }
        }
      }
    } else {
      if (!baij->donotstash) {
        if (roworiented) {
          ierr = MatStashValuesRowBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr);
        } else {
          ierr = MatStashValuesColBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr);
        }
      }
    }
  }
#if defined(PETSC_USE_BOPT_g)
  baij->ht_total_ct = total_ct;
  baij->ht_insert_ct = insert_ct;
#endif
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatGetValues_MPIBAIJ"
PetscErrorCode MatGetValues_MPIBAIJ(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],PetscScalar v[])
{
  Mat_MPIBAIJ    *baij = (Mat_MPIBAIJ*)mat->data;
  PetscErrorCode ierr;
  PetscInt       bs=mat->bs,i,j,bsrstart = baij->rstart*bs,bsrend = baij->rend*bs;
  PetscInt       bscstart = baij->cstart*bs,bscend = baij->cend*bs,row,col,data;

  PetscFunctionBegin;
  for (i=0; i<m; i++) {
    if (idxm[i] < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"Negative row: %D",idxm[i]);
    if (idxm[i] >= mat->M) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Row too large: row %D max %D",idxm[i],mat->M-1);
    if (idxm[i] >= bsrstart && idxm[i] < bsrend) {
      row = idxm[i] - bsrstart;
      for (j=0; j<n; j++) {
        if (idxn[j] < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"Negative column: %D",idxn[j]);
        if (idxn[j] >= mat->N) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Column too large: col %D max %D",idxn[j],mat->N-1);
        if (idxn[j] >= bscstart && idxn[j] < bscend){
          col = idxn[j] - bscstart;
          ierr = MatGetValues_SeqBAIJ(baij->A,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
        } else {
          if (!baij->colmap) {
            ierr = CreateColmap_MPIBAIJ_Private(mat);CHKERRQ(ierr);
          }
#if defined (PETSC_USE_CTABLE)
          ierr = PetscTableFind(baij->colmap,idxn[j]/bs+1,&data);CHKERRQ(ierr);
          data --;
#else
          data = baij->colmap[idxn[j]/bs]-1;
#endif
          if((data < 0) || (baij->garray[data/bs] != idxn[j]/bs)) *(v+i*n+j) = 0.0;
          else {
            col  = data + idxn[j]%bs;
            ierr = MatGetValues_SeqBAIJ(baij->B,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
          }
        }
      }
    } else {
      SETERRQ(PETSC_ERR_SUP,"Only local values currently supported");
    }
  }
 PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatNorm_MPIBAIJ"
PetscErrorCode MatNorm_MPIBAIJ(Mat mat,NormType type,PetscReal *nrm)
{
  Mat_MPIBAIJ    *baij = (Mat_MPIBAIJ*)mat->data;
  Mat_SeqBAIJ    *amat = (Mat_SeqBAIJ*)baij->A->data,*bmat = (Mat_SeqBAIJ*)baij->B->data;
  PetscErrorCode ierr;
  PetscInt       i,bs2=baij->bs2;
  PetscReal      sum = 0.0;
  MatScalar      *v;

  PetscFunctionBegin;
  if (baij->size == 1) {
    ierr =  MatNorm(baij->A,type,nrm);CHKERRQ(ierr);
  } else {
    if (type == NORM_FROBENIUS) {
      v = amat->a;
      for (i=0; i<amat->nz*bs2; i++) {
#if defined(PETSC_USE_COMPLEX)
        sum += PetscRealPart(PetscConj(*v)*(*v)); v++;
#else
        sum += (*v)*(*v); v++;
#endif
      }
      v = bmat->a;
      for (i=0; i<bmat->nz*bs2; i++) {
#if defined(PETSC_USE_COMPLEX)
        sum += PetscRealPart(PetscConj(*v)*(*v)); v++;
#else
        sum += (*v)*(*v); v++;
#endif
      }
      ierr = MPI_Allreduce(&sum,nrm,1,MPIU_REAL,MPI_SUM,mat->comm);CHKERRQ(ierr);
      *nrm = sqrt(*nrm);
    } else {
      SETERRQ(PETSC_ERR_SUP,"No support for this norm yet");
    }
  }
  PetscFunctionReturn(0);
}


/*
  Creates the hash table, and sets the table
  This table is created only once.
  If new entried need to be added to the matrix
  then the hash table has to be destroyed and
  recreated.
*/
#undef __FUNCT__
#define __FUNCT__ "MatCreateHashTable_MPIBAIJ_Private"
PetscErrorCode MatCreateHashTable_MPIBAIJ_Private(Mat mat,PetscReal factor)
{
  Mat_MPIBAIJ    *baij = (Mat_MPIBAIJ*)mat->data;
  Mat            A = baij->A,B=baij->B;
  Mat_SeqBAIJ    *a=(Mat_SeqBAIJ *)A->data,*b=(Mat_SeqBAIJ *)B->data;
  PetscInt       i,j,k,nz=a->nz+b->nz,h1,*ai=a->i,*aj=a->j,*bi=b->i,*bj=b->j;
  PetscErrorCode ierr;
  PetscInt       size,bs2=baij->bs2,rstart=baij->rstart;
  PetscInt       cstart=baij->cstart,*garray=baij->garray,row,col,Nbs=baij->Nbs;
  PetscInt       *HT,key;
  MatScalar      **HD;
  PetscReal      tmp;
#if defined(PETSC_USE_BOPT_g)
  PetscInt       ct=0,max=0;
#endif

  PetscFunctionBegin;
  baij->ht_size=(PetscInt)(factor*nz);
  size = baij->ht_size;

  if (baij->ht) {
    PetscFunctionReturn(0);
  }

  /* Allocate Memory for Hash Table */
  ierr     = PetscMalloc((size)*(sizeof(PetscInt)+sizeof(MatScalar*))+1,&baij->hd);CHKERRQ(ierr);
  baij->ht = (PetscInt*)(baij->hd + size);
  HD       = baij->hd;
  HT       = baij->ht;


  ierr = PetscMemzero(HD,size*(sizeof(PetscInt)+sizeof(PetscScalar*)));CHKERRQ(ierr);


  /* Loop Over A */
  for (i=0; i<a->mbs; i++) {
    for (j=ai[i]; j<ai[i+1]; j++) {
      row = i+rstart;
      col = aj[j]+cstart;

      key = row*Nbs + col + 1;
      h1  = HASH(size,key,tmp);
      for (k=0; k<size; k++){
        if (!HT[(h1+k)%size]) {
          HT[(h1+k)%size] = key;
          HD[(h1+k)%size] = a->a + j*bs2;
          break;
#if defined(PETSC_USE_BOPT_g)
        } else {
          ct++;
#endif
        }
      }
#if defined(PETSC_USE_BOPT_g)
      if (k> max) max = k;
#endif
    }
  }
  /* Loop Over B */
  for (i=0; i<b->mbs; i++) {
    for (j=bi[i]; j<bi[i+1]; j++) {
      row = i+rstart;
      col = garray[bj[j]];
      key = row*Nbs + col + 1;
      h1  = HASH(size,key,tmp);
      for (k=0; k<size; k++){
        if (!HT[(h1+k)%size]) {
          HT[(h1+k)%size] = key;
          HD[(h1+k)%size] = b->a + j*bs2;
          break;
#if defined(PETSC_USE_BOPT_g)
        } else {
          ct++;
#endif
        }
      }
#if defined(PETSC_USE_BOPT_g)
      if (k> max) max = k;
#endif
    }
  }

  /* Print Summary */
#if defined(PETSC_USE_BOPT_g)
  for (i=0,j=0; i<size; i++) {
    if (HT[i]) {j++;}
  }
  PetscLogInfo(0,"MatCreateHashTable_MPIBAIJ_Private: Average Search = %5.2f,max search = %D\n",(!j)? 0.0:((PetscReal)(ct+j))/j,max);
#endif
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatAssemblyBegin_MPIBAIJ"
PetscErrorCode MatAssemblyBegin_MPIBAIJ(Mat mat,MatAssemblyType mode)
{
  Mat_MPIBAIJ    *baij = (Mat_MPIBAIJ*)mat->data;
  PetscErrorCode ierr;
  PetscInt       nstash,reallocs;
  InsertMode     addv;

  PetscFunctionBegin;
  if (baij->donotstash) {
    PetscFunctionReturn(0);
  }

  /* make sure all processors are either in INSERTMODE or ADDMODE */
  ierr = MPI_Allreduce(&mat->insertmode,&addv,1,MPI_INT,MPI_BOR,mat->comm);CHKERRQ(ierr);
  if (addv == (ADD_VALUES|INSERT_VALUES)) {
    SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Some processors inserted others added");
  }
  mat->insertmode = addv; /* in case this processor had no cache */

  ierr = MatStashScatterBegin_Private(&mat->stash,baij->rowners_bs);CHKERRQ(ierr);
  ierr = MatStashScatterBegin_Private(&mat->bstash,baij->rowners);CHKERRQ(ierr);
  ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
  PetscLogInfo(0,"MatAssemblyBegin_MPIBAIJ:Stash has %D entries,uses %D mallocs.\n",nstash,reallocs);
  ierr = MatStashGetInfo_Private(&mat->bstash,&nstash,&reallocs);CHKERRQ(ierr);
  PetscLogInfo(0,"MatAssemblyBegin_MPIBAIJ:Block-Stash has %D entries, uses %D mallocs.\n",nstash,reallocs);
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatAssemblyEnd_MPIBAIJ"
PetscErrorCode MatAssemblyEnd_MPIBAIJ(Mat mat,MatAssemblyType mode)
{
  Mat_MPIBAIJ    *baij=(Mat_MPIBAIJ*)mat->data;
  Mat_SeqBAIJ    *a=(Mat_SeqBAIJ*)baij->A->data,*b=(Mat_SeqBAIJ*)baij->B->data;
  PetscErrorCode ierr;
  PetscInt       i,j,rstart,ncols,flg,bs2=baij->bs2;
  PetscInt       *row,*col,other_disassembled;
  PetscTruth     r1,r2,r3;
  MatScalar      *val;
  InsertMode     addv = mat->insertmode;
  PetscMPIInt    n;

  PetscFunctionBegin;
  if (!baij->donotstash) {
    while (1) {
      ierr = MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
      if (!flg) break;

      for (i=0; i<n;) {
        /* Now identify the consecutive vals belonging to the same row */
        for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
        if (j < n) ncols = j-i;
        else       ncols = n-i;
        /* Now assemble all these values with a single function call */
        ierr = MatSetValues_MPIBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i,addv);CHKERRQ(ierr);
        i = j;
      }
    }
    ierr = MatStashScatterEnd_Private(&mat->stash);CHKERRQ(ierr);
    /* Now process the block-stash. Since the values are stashed column-oriented,
       set the roworiented flag to column oriented, and after MatSetValues()
       restore the original flags */
    r1 = baij->roworiented;
    r2 = a->roworiented;
    r3 = b->roworiented;
    baij->roworiented = PETSC_FALSE;
    a->roworiented    = PETSC_FALSE;
    b->roworiented    = PETSC_FALSE;
    while (1) {
      ierr = MatStashScatterGetMesg_Private(&mat->bstash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
      if (!flg) break;

      for (i=0; i<n;) {
        /* Now identify the consecutive vals belonging to the same row */
        for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
        if (j < n) ncols = j-i;
        else       ncols = n-i;
        ierr = MatSetValuesBlocked_MPIBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i*bs2,addv);CHKERRQ(ierr);
        i = j;
      }
    }
    ierr = MatStashScatterEnd_Private(&mat->bstash);CHKERRQ(ierr);
    baij->roworiented = r1;
    a->roworiented    = r2;
    b->roworiented    = r3;
  }

  ierr = MatAssemblyBegin(baij->A,mode);CHKERRQ(ierr);
  ierr = MatAssemblyEnd(baij->A,mode);CHKERRQ(ierr);

  /* determine if any processor has disassembled, if so we must
     also disassemble ourselfs, in order that we may reassemble. */
  /*
     if nonzero structure of submatrix B cannot change then we know that
     no processor disassembled thus we can skip this stuff
  */
  if (!((Mat_SeqBAIJ*)baij->B->data)->nonew)  {
    ierr = MPI_Allreduce(&mat->was_assembled,&other_disassembled,1,MPI_INT,MPI_PROD,mat->comm);CHKERRQ(ierr);
    if (mat->was_assembled && !other_disassembled) {
      ierr = DisAssemble_MPIBAIJ(mat);CHKERRQ(ierr);
    }
  }

  if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) {
    ierr = MatSetUpMultiply_MPIBAIJ(mat);CHKERRQ(ierr);
  }
  ierr = MatAssemblyBegin(baij->B,mode);CHKERRQ(ierr);
  ierr = MatAssemblyEnd(baij->B,mode);CHKERRQ(ierr);

#if defined(PETSC_USE_BOPT_g)
  if (baij->ht && mode== MAT_FINAL_ASSEMBLY) {
    PetscLogInfo(0,"MatAssemblyEnd_MPIBAIJ:Average Hash Table Search in MatSetValues = %5.2f\n",((PetscReal)baij->ht_total_ct)/baij->ht_insert_ct);
    baij->ht_total_ct  = 0;
    baij->ht_insert_ct = 0;
  }
#endif
  if (baij->ht_flag && !baij->ht && mode == MAT_FINAL_ASSEMBLY) {
    ierr = MatCreateHashTable_MPIBAIJ_Private(mat,baij->ht_fact);CHKERRQ(ierr);
    mat->ops->setvalues        = MatSetValues_MPIBAIJ_HT;
    mat->ops->setvaluesblocked = MatSetValuesBlocked_MPIBAIJ_HT;
  }

  if (baij->rowvalues) {
    ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);
    baij->rowvalues = 0;
  }
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatView_MPIBAIJ_ASCIIorDraworSocket"
static PetscErrorCode MatView_MPIBAIJ_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
{
  Mat_MPIBAIJ       *baij = (Mat_MPIBAIJ*)mat->data;
  PetscErrorCode    ierr;
  PetscMPIInt       size = baij->size,rank = baij->rank;
  PetscInt          bs = mat->bs;
  PetscTruth        iascii,isdraw;
  PetscViewer       sviewer;
  PetscViewerFormat format;

  PetscFunctionBegin;
  /* printf(" MatView_MPIBAIJ_ASCIIorDraworSocket is called ...\n"); */
  ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&iascii);CHKERRQ(ierr);
  ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_DRAW,&isdraw);CHKERRQ(ierr);
  if (iascii) {
    ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
    if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
      MatInfo info;
      ierr = MPI_Comm_rank(mat->comm,&rank);CHKERRQ(ierr);
      ierr = MatGetInfo(mat,MAT_LOCAL,&info);CHKERRQ(ierr);
      ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] Local rows %D nz %D nz alloced %D bs %D mem %D\n",
              rank,mat->m,(PetscInt)info.nz_used*bs,(PetscInt)info.nz_allocated*bs,
              mat->bs,(PetscInt)info.memory);CHKERRQ(ierr);
      ierr = MatGetInfo(baij->A,MAT_LOCAL,&info);CHKERRQ(ierr);
      ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] on-diagonal part: nz %D \n",rank,(PetscInt)info.nz_used*bs);CHKERRQ(ierr);
      ierr = MatGetInfo(baij->B,MAT_LOCAL,&info);CHKERRQ(ierr);
      ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] off-diagonal part: nz %D \n",rank,(PetscInt)info.nz_used*bs);CHKERRQ(ierr);
      ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
      ierr = VecScatterView(baij->Mvctx,viewer);CHKERRQ(ierr);
      PetscFunctionReturn(0);
    } else if (format == PETSC_VIEWER_ASCII_INFO) {
      ierr = PetscViewerASCIIPrintf(viewer,"  block size is %D\n",bs);CHKERRQ(ierr);
      PetscFunctionReturn(0);
    } else if (format == PETSC_VIEWER_ASCII_FACTOR_INFO) {
      PetscFunctionReturn(0);
    }
  }

  if (isdraw) {
    PetscDraw       draw;
    PetscTruth isnull;
    ierr = PetscViewerDrawGetDraw(viewer,0,&draw);CHKERRQ(ierr);
    ierr = PetscDrawIsNull(draw,&isnull);CHKERRQ(ierr); if (isnull) PetscFunctionReturn(0);
  }

  if (size == 1) {
    ierr = PetscObjectSetName((PetscObject)baij->A,mat->name);CHKERRQ(ierr);
    ierr = MatView(baij->A,viewer);CHKERRQ(ierr);
  } else {
    /* assemble the entire matrix onto first processor. */
    Mat         A;
    Mat_SeqBAIJ *Aloc;
    PetscInt    M = mat->M,N = mat->N,*ai,*aj,col,i,j,k,*rvals,mbs = baij->mbs;
    MatScalar   *a;

    /* Here we are creating a temporary matrix, so will assume MPIBAIJ is acceptable */
    /* Perhaps this should be the type of mat? */
    if (!rank) {
      ierr = MatCreate(mat->comm,M,N,M,N,&A);CHKERRQ(ierr);
    } else {
      ierr = MatCreate(mat->comm,0,0,M,N,&A);CHKERRQ(ierr);
    }
    ierr = MatSetType(A,MATMPIBAIJ);CHKERRQ(ierr);
    ierr = MatMPIBAIJSetPreallocation(A,mat->bs,0,PETSC_NULL,0,PETSC_NULL);CHKERRQ(ierr);
    PetscLogObjectParent(mat,A);

    /* copy over the A part */
    Aloc = (Mat_SeqBAIJ*)baij->A->data;
    ai   = Aloc->i; aj = Aloc->j; a = Aloc->a;
    ierr = PetscMalloc(bs*sizeof(PetscInt),&rvals);CHKERRQ(ierr);

    for (i=0; i<mbs; i++) {
      rvals[0] = bs*(baij->rstart + i);
      for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
      for (j=ai[i]; j<ai[i+1]; j++) {
        col = (baij->cstart+aj[j])*bs;
        for (k=0; k<bs; k++) {
          ierr = MatSetValues_MPIBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
          col++; a += bs;
        }
      }
    }
    /* copy over the B part */
    Aloc = (Mat_SeqBAIJ*)baij->B->data;
    ai = Aloc->i; aj = Aloc->j; a = Aloc->a;
    for (i=0; i<mbs; i++) {
      rvals[0] = bs*(baij->rstart + i);
      for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
      for (j=ai[i]; j<ai[i+1]; j++) {
        col = baij->garray[aj[j]]*bs;
        for (k=0; k<bs; k++) {
          ierr = MatSetValues_MPIBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
          col++; a += bs;
        }
      }
    }
    ierr = PetscFree(rvals);CHKERRQ(ierr);
    ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
    ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
    /*
       Everyone has to call to draw the matrix since the graphics waits are
       synchronized across all processors that share the PetscDraw object
    */
    ierr = PetscViewerGetSingleton(viewer,&sviewer);CHKERRQ(ierr);
    if (!rank) {
      ierr = PetscObjectSetName((PetscObject)((Mat_MPIBAIJ*)(A->data))->A,mat->name);CHKERRQ(ierr);
      ierr = MatView(((Mat_MPIBAIJ*)(A->data))->A,sviewer);CHKERRQ(ierr);
    }
    ierr = PetscViewerRestoreSingleton(viewer,&sviewer);CHKERRQ(ierr);
    ierr = MatDestroy(A);CHKERRQ(ierr);
  }
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatView_MPIBAIJ"
PetscErrorCode MatView_MPIBAIJ(Mat mat,PetscViewer viewer)
{
  PetscErrorCode ierr;
  PetscTruth     iascii,isdraw,issocket,isbinary;

  PetscFunctionBegin;
  ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&iascii);CHKERRQ(ierr);
  ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_DRAW,&isdraw);CHKERRQ(ierr);
  ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_SOCKET,&issocket);CHKERRQ(ierr);
  ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_BINARY,&isbinary);CHKERRQ(ierr);
  if (iascii || isdraw || issocket || isbinary) {
    ierr = MatView_MPIBAIJ_ASCIIorDraworSocket(mat,viewer);CHKERRQ(ierr);
  } else {
    SETERRQ1(PETSC_ERR_SUP,"Viewer type %s not supported by MPIBAIJ matrices",((PetscObject)viewer)->type_name);
  }
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatDestroy_MPIBAIJ"
PetscErrorCode MatDestroy_MPIBAIJ(Mat mat)
{
  Mat_MPIBAIJ    *baij = (Mat_MPIBAIJ*)mat->data;
  PetscErrorCode ierr;

  PetscFunctionBegin;
#if defined(PETSC_USE_LOG)
  PetscLogObjectState((PetscObject)mat,"Rows=%D,Cols=%D",mat->M,mat->N);
#endif
  ierr = MatStashDestroy_Private(&mat->stash);CHKERRQ(ierr);
  ierr = MatStashDestroy_Private(&mat->bstash);CHKERRQ(ierr);
  ierr = PetscFree(baij->rowners);CHKERRQ(ierr);
  ierr = MatDestroy(baij->A);CHKERRQ(ierr);
  ierr = MatDestroy(baij->B);CHKERRQ(ierr);
#if defined (PETSC_USE_CTABLE)
  if (baij->colmap) {ierr = PetscTableDelete(baij->colmap);CHKERRQ(ierr);}
#else
  if (baij->colmap) {ierr = PetscFree(baij->colmap);CHKERRQ(ierr);}
#endif
  if (baij->garray) {ierr = PetscFree(baij->garray);CHKERRQ(ierr);}
  if (baij->lvec)   {ierr = VecDestroy(baij->lvec);CHKERRQ(ierr);}
  if (baij->Mvctx)  {ierr = VecScatterDestroy(baij->Mvctx);CHKERRQ(ierr);}
  if (baij->rowvalues) {ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);}
  if (baij->barray) {ierr = PetscFree(baij->barray);CHKERRQ(ierr);}
  if (baij->hd) {ierr = PetscFree(baij->hd);CHKERRQ(ierr);}
#if defined(PETSC_USE_MAT_SINGLE)
  if (baij->setvaluescopy) {ierr = PetscFree(baij->setvaluescopy);CHKERRQ(ierr);}
#endif
  ierr = PetscFree(baij);CHKERRQ(ierr);

  ierr = PetscObjectComposeFunction((PetscObject)mat,"MatStoreValues_C","",PETSC_NULL);CHKERRQ(ierr);
  ierr = PetscObjectComposeFunction((PetscObject)mat,"MatRetrieveValues_C","",PETSC_NULL);CHKERRQ(ierr);
  ierr = PetscObjectComposeFunction((PetscObject)mat,"MatGetDiagonalBlock_C","",PETSC_NULL);CHKERRQ(ierr);
  ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMPIBAIJSetPreallocation_C","",PETSC_NULL);CHKERRQ(ierr);
  ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMPIBAIJSetPreallocationCSR_C","",PETSC_NULL);CHKERRQ(ierr);
  ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDiagonalScaleLocal_C","",PETSC_NULL);CHKERRQ(ierr);
  ierr = PetscObjectComposeFunction((PetscObject)mat,"MatSetHashTableFactor_C","",PETSC_NULL);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatMult_MPIBAIJ"
PetscErrorCode MatMult_MPIBAIJ(Mat A,Vec xx,Vec yy)
{
  Mat_MPIBAIJ    *a = (Mat_MPIBAIJ*)A->data;
  PetscErrorCode ierr;
  PetscInt       nt;

  PetscFunctionBegin;
  ierr = VecGetLocalSize(xx,&nt);CHKERRQ(ierr);
  if (nt != A->n) {
    SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible partition of A and xx");
  }
  ierr = VecGetLocalSize(yy,&nt);CHKERRQ(ierr);
  if (nt != A->m) {
    SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible parition of A and yy");
  }
  ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
  ierr = (*a->A->ops->mult)(a->A,xx,yy);CHKERRQ(ierr);
  ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
  ierr = (*a->B->ops->multadd)(a->B,a->lvec,yy,yy);CHKERRQ(ierr);
  ierr = VecScatterPostRecvs(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatMultAdd_MPIBAIJ"
PetscErrorCode MatMultAdd_MPIBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
{
  Mat_MPIBAIJ    *a = (Mat_MPIBAIJ*)A->data;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
  ierr = (*a->A->ops->multadd)(a->A,xx,yy,zz);CHKERRQ(ierr);
  ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
  ierr = (*a->B->ops->multadd)(a->B,a->lvec,zz,zz);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatMultTranspose_MPIBAIJ"
PetscErrorCode MatMultTranspose_MPIBAIJ(Mat A,Vec xx,Vec yy)
{
  Mat_MPIBAIJ    *a = (Mat_MPIBAIJ*)A->data;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  /* do nondiagonal part */
  ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
  /* send it on its way */
  ierr = VecScatterBegin(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
  /* do local part */
  ierr = (*a->A->ops->multtranspose)(a->A,xx,yy);CHKERRQ(ierr);
  /* receive remote parts: note this assumes the values are not actually */
  /* inserted in yy until the next line, which is true for my implementation*/
  /* but is not perhaps always true. */
  ierr = VecScatterEnd(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatMultTransposeAdd_MPIBAIJ"
PetscErrorCode MatMultTransposeAdd_MPIBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
{
  Mat_MPIBAIJ    *a = (Mat_MPIBAIJ*)A->data;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  /* do nondiagonal part */
  ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
  /* send it on its way */
  ierr = VecScatterBegin(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
  /* do local part */
  ierr = (*a->A->ops->multtransposeadd)(a->A,xx,yy,zz);CHKERRQ(ierr);
  /* receive remote parts: note this assumes the values are not actually */
  /* inserted in yy until the next line, which is true for my implementation*/
  /* but is not perhaps always true. */
  ierr = VecScatterEnd(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

/*
  This only works correctly for square matrices where the subblock A->A is the
   diagonal block
*/
#undef __FUNCT__
#define __FUNCT__ "MatGetDiagonal_MPIBAIJ"
PetscErrorCode MatGetDiagonal_MPIBAIJ(Mat A,Vec v)
{
  Mat_MPIBAIJ    *a = (Mat_MPIBAIJ*)A->data;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  if (A->M != A->N) SETERRQ(PETSC_ERR_SUP,"Supports only square matrix where A->A is diag block");
  ierr = MatGetDiagonal(a->A,v);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatScale_MPIBAIJ"
PetscErrorCode MatScale_MPIBAIJ(const PetscScalar *aa,Mat A)
{
  Mat_MPIBAIJ    *a = (Mat_MPIBAIJ*)A->data;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  ierr = MatScale(aa,a->A);CHKERRQ(ierr);
  ierr = MatScale(aa,a->B);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatGetRow_MPIBAIJ"
PetscErrorCode MatGetRow_MPIBAIJ(Mat matin,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
{
  Mat_MPIBAIJ    *mat = (Mat_MPIBAIJ*)matin->data;
  PetscScalar    *vworkA,*vworkB,**pvA,**pvB,*v_p;
  PetscErrorCode ierr;
  PetscInt       bs = matin->bs,bs2 = mat->bs2,i,*cworkA,*cworkB,**pcA,**pcB;
  PetscInt       nztot,nzA,nzB,lrow,brstart = mat->rstart*bs,brend = mat->rend*bs;
  PetscInt       *cmap,*idx_p,cstart = mat->cstart;

  PetscFunctionBegin;
  if (mat->getrowactive == PETSC_TRUE) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Already active");
  mat->getrowactive = PETSC_TRUE;

  if (!mat->rowvalues && (idx || v)) {
    /*
        allocate enough space to hold information from the longest row.
    */
    Mat_SeqBAIJ *Aa = (Mat_SeqBAIJ*)mat->A->data,*Ba = (Mat_SeqBAIJ*)mat->B->data;
    PetscInt     max = 1,mbs = mat->mbs,tmp;
    for (i=0; i<mbs; i++) {
      tmp = Aa->i[i+1] - Aa->i[i] + Ba->i[i+1] - Ba->i[i];
      if (max < tmp) { max = tmp; }
    }
    ierr = PetscMalloc(max*bs2*(sizeof(PetscInt)+sizeof(PetscScalar)),&mat->rowvalues);CHKERRQ(ierr);
    mat->rowindices = (PetscInt*)(mat->rowvalues + max*bs2);
  }

  if (row < brstart || row >= brend) SETERRQ(PETSC_ERR_SUP,"Only local rows")
  lrow = row - brstart;

  pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB;
  if (!v)   {pvA = 0; pvB = 0;}
  if (!idx) {pcA = 0; if (!v) pcB = 0;}
  ierr = (*mat->A->ops->getrow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
  ierr = (*mat->B->ops->getrow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
  nztot = nzA + nzB;

  cmap  = mat->garray;
  if (v  || idx) {
    if (nztot) {
      /* Sort by increasing column numbers, assuming A and B already sorted */
      PetscInt imark = -1;
      if (v) {
        *v = v_p = mat->rowvalues;
        for (i=0; i<nzB; i++) {
          if (cmap[cworkB[i]/bs] < cstart)   v_p[i] = vworkB[i];
          else break;
        }
        imark = i;
        for (i=0; i<nzA; i++)     v_p[imark+i] = vworkA[i];
        for (i=imark; i<nzB; i++) v_p[nzA+i]   = vworkB[i];
      }
      if (idx) {
        *idx = idx_p = mat->rowindices;
        if (imark > -1) {
          for (i=0; i<imark; i++) {
            idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs;
          }
        } else {
          for (i=0; i<nzB; i++) {
            if (cmap[cworkB[i]/bs] < cstart)
              idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
            else break;
          }
          imark = i;
        }
        for (i=0; i<nzA; i++)     idx_p[imark+i] = cstart*bs + cworkA[i];
        for (i=imark; i<nzB; i++) idx_p[nzA+i]   = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
      }
    } else {
      if (idx) *idx = 0;
      if (v)   *v   = 0;
    }
  }
  *nz = nztot;
  ierr = (*mat->A->ops->restorerow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
  ierr = (*mat->B->ops->restorerow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatRestoreRow_MPIBAIJ"
PetscErrorCode MatRestoreRow_MPIBAIJ(Mat mat,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
{
  Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;

  PetscFunctionBegin;
  if (baij->getrowactive == PETSC_FALSE) {
    SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"MatGetRow not called");
  }
  baij->getrowactive = PETSC_FALSE;
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatZeroEntries_MPIBAIJ"
PetscErrorCode MatZeroEntries_MPIBAIJ(Mat A)
{
  Mat_MPIBAIJ    *l = (Mat_MPIBAIJ*)A->data;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  ierr = MatZeroEntries(l->A);CHKERRQ(ierr);
  ierr = MatZeroEntries(l->B);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatGetInfo_MPIBAIJ"
PetscErrorCode MatGetInfo_MPIBAIJ(Mat matin,MatInfoType flag,MatInfo *info)
{
  Mat_MPIBAIJ    *a = (Mat_MPIBAIJ*)matin->data;
  Mat            A = a->A,B = a->B;
  PetscErrorCode ierr;
  PetscReal      isend[5],irecv[5];

  PetscFunctionBegin;
  info->block_size     = (PetscReal)matin->bs;
  ierr = MatGetInfo(A,MAT_LOCAL,info);CHKERRQ(ierr);
  isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
  isend[3] = info->memory;  isend[4] = info->mallocs;
  ierr = MatGetInfo(B,MAT_LOCAL,info);CHKERRQ(ierr);
  isend[0] += info->nz_used; isend[1] += info->nz_allocated; isend[2] += info->nz_unneeded;
  isend[3] += info->memory;  isend[4] += info->mallocs;
  if (flag == MAT_LOCAL) {
    info->nz_used      = isend[0];
    info->nz_allocated = isend[1];
    info->nz_unneeded  = isend[2];
    info->memory       = isend[3];
    info->mallocs      = isend[4];
  } else if (flag == MAT_GLOBAL_MAX) {
    ierr = MPI_Allreduce(isend,irecv,5,MPIU_REAL,MPI_MAX,matin->comm);CHKERRQ(ierr);
    info->nz_used      = irecv[0];
    info->nz_allocated = irecv[1];
    info->nz_unneeded  = irecv[2];
    info->memory       = irecv[3];
    info->mallocs      = irecv[4];
  } else if (flag == MAT_GLOBAL_SUM) {
    ierr = MPI_Allreduce(isend,irecv,5,MPIU_REAL,MPI_SUM,matin->comm);CHKERRQ(ierr);
    info->nz_used      = irecv[0];
    info->nz_allocated = irecv[1];
    info->nz_unneeded  = irecv[2];
    info->memory       = irecv[3];
    info->mallocs      = irecv[4];
  } else {
    SETERRQ1(PETSC_ERR_ARG_WRONG,"Unknown MatInfoType argument %d",(int)flag);
  }
  info->rows_global       = (PetscReal)A->M;
  info->columns_global    = (PetscReal)A->N;
  info->rows_local        = (PetscReal)A->m;
  info->columns_local     = (PetscReal)A->N;
  info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
  info->fill_ratio_needed = 0;
  info->factor_mallocs    = 0;
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatSetOption_MPIBAIJ"
PetscErrorCode MatSetOption_MPIBAIJ(Mat A,MatOption op)
{
  Mat_MPIBAIJ    *a = (Mat_MPIBAIJ*)A->data;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  switch (op) {
  case MAT_NO_NEW_NONZERO_LOCATIONS:
  case MAT_YES_NEW_NONZERO_LOCATIONS:
  case MAT_COLUMNS_UNSORTED:
  case MAT_COLUMNS_SORTED:
  case MAT_NEW_NONZERO_ALLOCATION_ERR:
  case MAT_KEEP_ZEROED_ROWS:
  case MAT_NEW_NONZERO_LOCATION_ERR:
    ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
    ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
    break;
  case MAT_ROW_ORIENTED:
    a->roworiented = PETSC_TRUE;
    ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
    ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
    break;
  case MAT_ROWS_SORTED:
  case MAT_ROWS_UNSORTED:
  case MAT_YES_NEW_DIAGONALS:
    PetscLogInfo(A,"Info:MatSetOption_MPIBAIJ:Option ignored\n");
    break;
  case MAT_COLUMN_ORIENTED:
    a->roworiented = PETSC_FALSE;
    ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
    ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
    break;
  case MAT_IGNORE_OFF_PROC_ENTRIES:
    a->donotstash = PETSC_TRUE;
    break;
  case MAT_NO_NEW_DIAGONALS:
    SETERRQ(PETSC_ERR_SUP,"MAT_NO_NEW_DIAGONALS");
  case MAT_USE_HASH_TABLE:
    a->ht_flag = PETSC_TRUE;
    break;
  case MAT_SYMMETRIC:
  case MAT_STRUCTURALLY_SYMMETRIC:
  case MAT_HERMITIAN:
  case MAT_SYMMETRY_ETERNAL:
    ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
    break;
  case MAT_NOT_SYMMETRIC:
  case MAT_NOT_STRUCTURALLY_SYMMETRIC:
  case MAT_NOT_HERMITIAN:
  case MAT_NOT_SYMMETRY_ETERNAL:
    break;
  default:
    SETERRQ(PETSC_ERR_SUP,"unknown option");
  }
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatTranspose_MPIBAIJ("
PetscErrorCode MatTranspose_MPIBAIJ(Mat A,Mat *matout)
{
  Mat_MPIBAIJ    *baij = (Mat_MPIBAIJ*)A->data;
  Mat_SeqBAIJ    *Aloc;
  Mat            B;
  PetscErrorCode ierr;
  PetscInt       M=A->M,N=A->N,*ai,*aj,i,*rvals,j,k,col;
  PetscInt       bs=A->bs,mbs=baij->mbs;
  MatScalar      *a;

  PetscFunctionBegin;
  if (!matout && M != N) SETERRQ(PETSC_ERR_ARG_SIZ,"Square matrix only for in-place");
  ierr = MatCreate(A->comm,A->n,A->m,N,M,&B);CHKERRQ(ierr);
  ierr = MatSetType(B,A->type_name);CHKERRQ(ierr);
  ierr = MatMPIBAIJSetPreallocation(B,A->bs,0,PETSC_NULL,0,PETSC_NULL);CHKERRQ(ierr);

  /* copy over the A part */
  Aloc = (Mat_SeqBAIJ*)baij->A->data;
  ai   = Aloc->i; aj = Aloc->j; a = Aloc->a;
  ierr = PetscMalloc(bs*sizeof(PetscInt),&rvals);CHKERRQ(ierr);

  for (i=0; i<mbs; i++) {
    rvals[0] = bs*(baij->rstart + i);
    for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
    for (j=ai[i]; j<ai[i+1]; j++) {
      col = (baij->cstart+aj[j])*bs;
      for (k=0; k<bs; k++) {
        ierr = MatSetValues_MPIBAIJ_MatScalar(B,1,&col,bs,rvals,a,INSERT_VALUES);CHKERRQ(ierr);
        col++; a += bs;
      }
    }
  }
  /* copy over the B part */
  Aloc = (Mat_SeqBAIJ*)baij->B->data;
  ai = Aloc->i; aj = Aloc->j; a = Aloc->a;
  for (i=0; i<mbs; i++) {
    rvals[0] = bs*(baij->rstart + i);
    for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
    for (j=ai[i]; j<ai[i+1]; j++) {
      col = baij->garray[aj[j]]*bs;
      for (k=0; k<bs; k++) {
        ierr = MatSetValues_MPIBAIJ_MatScalar(B,1,&col,bs,rvals,a,INSERT_VALUES);CHKERRQ(ierr);
        col++; a += bs;
      }
    }
  }
  ierr = PetscFree(rvals);CHKERRQ(ierr);
  ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);

  if (matout) {
    *matout = B;
  } else {
    ierr = MatHeaderCopy(A,B);CHKERRQ(ierr);
  }
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatDiagonalScale_MPIBAIJ"
PetscErrorCode MatDiagonalScale_MPIBAIJ(Mat mat,Vec ll,Vec rr)
{
  Mat_MPIBAIJ    *baij = (Mat_MPIBAIJ*)mat->data;
  Mat            a = baij->A,b = baij->B;
  PetscErrorCode ierr;
  PetscInt       s1,s2,s3;

  PetscFunctionBegin;
  ierr = MatGetLocalSize(mat,&s2,&s3);CHKERRQ(ierr);
  if (rr) {
    ierr = VecGetLocalSize(rr,&s1);CHKERRQ(ierr);
    if (s1!=s3) SETERRQ(PETSC_ERR_ARG_SIZ,"right vector non-conforming local size");
    /* Overlap communication with computation. */
    ierr = VecScatterBegin(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
  }
  if (ll) {
    ierr = VecGetLocalSize(ll,&s1);CHKERRQ(ierr);
    if (s1!=s2) SETERRQ(PETSC_ERR_ARG_SIZ,"left vector non-conforming local size");
    ierr = (*b->ops->diagonalscale)(b,ll,PETSC_NULL);CHKERRQ(ierr);
  }
  /* scale  the diagonal block */
  ierr = (*a->ops->diagonalscale)(a,ll,rr);CHKERRQ(ierr);

  if (rr) {
    /* Do a scatter end and then right scale the off-diagonal block */
    ierr = VecScatterEnd(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
    ierr = (*b->ops->diagonalscale)(b,PETSC_NULL,baij->lvec);CHKERRQ(ierr);
  }

  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatZeroRows_MPIBAIJ"
PetscErrorCode MatZeroRows_MPIBAIJ(Mat A,IS is,const PetscScalar *diag)
{
  Mat_MPIBAIJ    *l = (Mat_MPIBAIJ*)A->data;
  PetscErrorCode ierr;
  PetscMPIInt    imdex,size = l->size,n,rank = l->rank;
  PetscInt       i,N,*rows,*owners = l->rowners;
  PetscInt       *nprocs,j,idx,nsends,row;
  PetscInt       nmax,*svalues,*starts,*owner,nrecvs;
  PetscInt       *rvalues,tag = A->tag,count,base,slen,*source;
  PetscInt       *lens,*lrows,*values,bs=A->bs,rstart_bs=l->rstart_bs;
  MPI_Comm       comm = A->comm;
  MPI_Request    *send_waits,*recv_waits;
  MPI_Status     recv_status,*send_status;
  IS             istmp;
  PetscTruth     found;

  PetscFunctionBegin;
  ierr = ISGetLocalSize(is,&N);CHKERRQ(ierr);
  ierr = ISGetIndices(is,&rows);CHKERRQ(ierr);

  /*  first count number of contributors to each processor */
  ierr  = PetscMalloc(2*size*sizeof(PetscInt),&nprocs);CHKERRQ(ierr);
  ierr  = PetscMemzero(nprocs,2*size*sizeof(PetscInt));CHKERRQ(ierr);
  ierr  = PetscMalloc((N+1)*sizeof(PetscInt),&owner);CHKERRQ(ierr); /* see note*/
  for (i=0; i<N; i++) {
    idx   = rows[i];
    found = PETSC_FALSE;
    for (j=0; j<size; j++) {
      if (idx >= owners[j]*bs && idx < owners[j+1]*bs) {
        nprocs[2*j]++; nprocs[2*j+1] = 1; owner[i] = j; found = PETSC_TRUE; break;
      }
    }
    if (!found) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Index out of range");
  }
  nsends = 0;  for (i=0; i<size; i++) { nsends += nprocs[2*i+1];}

  /* inform other processors of number of messages and max length*/
  ierr = PetscMaxSum(comm,nprocs,&nmax,&nrecvs);CHKERRQ(ierr);

  /* post receives:   */
  ierr = PetscMalloc((nrecvs+1)*(nmax+1)*sizeof(PetscInt),&rvalues);CHKERRQ(ierr);
  ierr = PetscMalloc((nrecvs+1)*sizeof(MPI_Request),&recv_waits);CHKERRQ(ierr);
  for (i=0; i<nrecvs; i++) {
    ierr = MPI_Irecv(rvalues+nmax*i,nmax,MPIU_INT,MPI_ANY_SOURCE,tag,comm,recv_waits+i);CHKERRQ(ierr);
  }

  /* do sends:
     1) starts[i] gives the starting index in svalues for stuff going to
     the ith processor
  */
  ierr = PetscMalloc((N+1)*sizeof(PetscInt),&svalues);CHKERRQ(ierr);
  ierr = PetscMalloc((nsends+1)*sizeof(MPI_Request),&send_waits);CHKERRQ(ierr);
  ierr = PetscMalloc((size+1)*sizeof(PetscInt),&starts);CHKERRQ(ierr);
  starts[0]  = 0;
  for (i=1; i<size; i++) { starts[i] = starts[i-1] + nprocs[2*i-2];}
  for (i=0; i<N; i++) {
    svalues[starts[owner[i]]++] = rows[i];
  }
  ierr = ISRestoreIndices(is,&rows);CHKERRQ(ierr);

  starts[0] = 0;
  for (i=1; i<size+1; i++) { starts[i] = starts[i-1] + nprocs[2*i-2];}
  count = 0;
  for (i=0; i<size; i++) {
    if (nprocs[2*i+1]) {
      ierr = MPI_Isend(svalues+starts[i],nprocs[2*i],MPIU_INT,i,tag,comm,send_waits+count++);CHKERRQ(ierr);
    }
  }
  ierr = PetscFree(starts);CHKERRQ(ierr);

  base = owners[rank]*bs;

  /*  wait on receives */
  ierr   = PetscMalloc(2*(nrecvs+1)*sizeof(PetscInt),&lens);CHKERRQ(ierr);
  source = lens + nrecvs;
  count  = nrecvs; slen = 0;
  while (count) {
    ierr = MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);CHKERRQ(ierr);
    /* unpack receives into our local space */
    ierr = MPI_Get_count(&recv_status,MPIU_INT,&n);CHKERRQ(ierr);
    source[imdex]  = recv_status.MPI_SOURCE;
    lens[imdex]    = n;
    slen          += n;
    count--;
  }
  ierr = PetscFree(recv_waits);CHKERRQ(ierr);

  /* move the data into the send scatter */
  ierr = PetscMalloc((slen+1)*sizeof(PetscInt),&lrows);CHKERRQ(ierr);
  count = 0;
  for (i=0; i<nrecvs; i++) {
    values = rvalues + i*nmax;
    for (j=0; j<lens[i]; j++) {
      lrows[count++] = values[j] - base;
    }
  }
  ierr = PetscFree(rvalues);CHKERRQ(ierr);
  ierr = PetscFree(lens);CHKERRQ(ierr);
  ierr = PetscFree(owner);CHKERRQ(ierr);
  ierr = PetscFree(nprocs);CHKERRQ(ierr);

  /* actually zap the local rows */
  ierr = ISCreateGeneral(PETSC_COMM_SELF,slen,lrows,&istmp);CHKERRQ(ierr);
  PetscLogObjectParent(A,istmp);

  /*
        Zero the required rows. If the "diagonal block" of the matrix
     is square and the user wishes to set the diagonal we use seperate
     code so that MatSetValues() is not called for each diagonal allocating
     new memory, thus calling lots of mallocs and slowing things down.

       Contributed by: Mathew Knepley
  */
  /* must zero l->B before l->A because the (diag) case below may put values into l->B*/
  ierr = MatZeroRows_SeqBAIJ(l->B,istmp,0);CHKERRQ(ierr);
  if (diag && (l->A->M == l->A->N)) {
    ierr = MatZeroRows_SeqBAIJ(l->A,istmp,diag);CHKERRQ(ierr);
  } else if (diag) {
    ierr = MatZeroRows_SeqBAIJ(l->A,istmp,0);CHKERRQ(ierr);
    if (((Mat_SeqBAIJ*)l->A->data)->nonew) {
      SETERRQ(PETSC_ERR_SUP,"MatZeroRows() on rectangular matrices cannot be used with the Mat options \n\
MAT_NO_NEW_NONZERO_LOCATIONS,MAT_NEW_NONZERO_LOCATION_ERR,MAT_NEW_NONZERO_ALLOCATION_ERR");
    }
    for (i=0; i<slen; i++) {
      row  = lrows[i] + rstart_bs;
      ierr = MatSetValues(A,1,&row,1,&row,diag,INSERT_VALUES);CHKERRQ(ierr);
    }
    ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
    ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  } else {
    ierr = MatZeroRows_SeqBAIJ(l->A,istmp,0);CHKERRQ(ierr);
  }

  ierr = ISDestroy(istmp);CHKERRQ(ierr);
  ierr = PetscFree(lrows);CHKERRQ(ierr);

  /* wait on sends */
  if (nsends) {
    ierr = PetscMalloc(nsends*sizeof(MPI_Status),&send_status);CHKERRQ(ierr);
    ierr = MPI_Waitall(nsends,send_waits,send_status);CHKERRQ(ierr);
    ierr = PetscFree(send_status);CHKERRQ(ierr);
  }
  ierr = PetscFree(send_waits);CHKERRQ(ierr);
  ierr = PetscFree(svalues);CHKERRQ(ierr);

  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatPrintHelp_MPIBAIJ"
PetscErrorCode MatPrintHelp_MPIBAIJ(Mat A)
{
  Mat_MPIBAIJ       *a   = (Mat_MPIBAIJ*)A->data;
  MPI_Comm          comm = A->comm;
  static PetscTruth called = PETSC_FALSE;
  PetscErrorCode    ierr;

  PetscFunctionBegin;
  if (!a->rank) {
    ierr = MatPrintHelp_SeqBAIJ(a->A);CHKERRQ(ierr);
  }
  if (called) {PetscFunctionReturn(0);} else called = PETSC_TRUE;
  ierr = (*PetscHelpPrintf)(comm," Options for MATMPIBAIJ matrix format (the defaults):\n");CHKERRQ(ierr);
  ierr = (*PetscHelpPrintf)(comm,"  -mat_use_hash_table <factor>: Use hashtable for efficient matrix assembly\n");CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatSetUnfactored_MPIBAIJ"
PetscErrorCode MatSetUnfactored_MPIBAIJ(Mat A)
{
  Mat_MPIBAIJ    *a   = (Mat_MPIBAIJ*)A->data;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  ierr = MatSetUnfactored(a->A);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

static PetscErrorCode MatDuplicate_MPIBAIJ(Mat,MatDuplicateOption,Mat *);

#undef __FUNCT__
#define __FUNCT__ "MatEqual_MPIBAIJ"
PetscErrorCode MatEqual_MPIBAIJ(Mat A,Mat B,PetscTruth *flag)
{
  Mat_MPIBAIJ    *matB = (Mat_MPIBAIJ*)B->data,*matA = (Mat_MPIBAIJ*)A->data;
  Mat            a,b,c,d;
  PetscTruth     flg;
  PetscErrorCode ierr;

  PetscFunctionBegin;
  a = matA->A; b = matA->B;
  c = matB->A; d = matB->B;

  ierr = MatEqual(a,c,&flg);CHKERRQ(ierr);
  if (flg == PETSC_TRUE) {
    ierr = MatEqual(b,d,&flg);CHKERRQ(ierr);
  }
  ierr = MPI_Allreduce(&flg,flag,1,MPI_INT,MPI_LAND,A->comm);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}


#undef __FUNCT__
#define __FUNCT__ "MatSetUpPreallocation_MPIBAIJ"
PetscErrorCode MatSetUpPreallocation_MPIBAIJ(Mat A)
{
  PetscErrorCode ierr;

  PetscFunctionBegin;
  ierr =  MatMPIBAIJSetPreallocation(A,1,PETSC_DEFAULT,0,PETSC_DEFAULT,0);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}

/* -------------------------------------------------------------------*/
static struct _MatOps MatOps_Values = {
       MatSetValues_MPIBAIJ,
       MatGetRow_MPIBAIJ,
       MatRestoreRow_MPIBAIJ,
       MatMult_MPIBAIJ,
/* 4*/ MatMultAdd_MPIBAIJ,
       MatMultTranspose_MPIBAIJ,
       MatMultTransposeAdd_MPIBAIJ,
       0,
       0,
       0,
/*10*/ 0,
       0,
       0,
       0,
       MatTranspose_MPIBAIJ,
/*15*/ MatGetInfo_MPIBAIJ,
       MatEqual_MPIBAIJ,
       MatGetDiagonal_MPIBAIJ,
       MatDiagonalScale_MPIBAIJ,
       MatNorm_MPIBAIJ,
/*20*/ MatAssemblyBegin_MPIBAIJ,
       MatAssemblyEnd_MPIBAIJ,
       0,
       MatSetOption_MPIBAIJ,
       MatZeroEntries_MPIBAIJ,
/*25*/ MatZeroRows_MPIBAIJ,
       0,
       0,
       0,
       0,
/*30*/ MatSetUpPreallocation_MPIBAIJ,
       0,
       0,
       0,
       0,
/*35*/ MatDuplicate_MPIBAIJ,
       0,
       0,
       0,
       0,
/*40*/ 0,
       MatGetSubMatrices_MPIBAIJ,
       MatIncreaseOverlap_MPIBAIJ,
       MatGetValues_MPIBAIJ,
       0,
/*45*/ MatPrintHelp_MPIBAIJ,
       MatScale_MPIBAIJ,
       0,
       0,
       0,
/*50*/ 0,
       0,
       0,
       0,
       0,
/*55*/ 0,
       0,
       MatSetUnfactored_MPIBAIJ,
       0,
       MatSetValuesBlocked_MPIBAIJ,
/*60*/ 0,
       MatDestroy_MPIBAIJ,
       MatView_MPIBAIJ,
       MatGetPetscMaps_Petsc,
       0,
/*65*/ 0,
       0,
       0,
       0,
       0,
/*70*/ MatGetRowMax_MPIBAIJ,
       0,
       0,
       0,
       0,
/*75*/ 0,
       0,
       0,
       0,
       0,
/*80*/ 0,
       0,
       0,
       0,
       MatLoad_MPIBAIJ,
/*85*/ 0,
       0,
       0,
       0,
       0,
/*90*/ 0,
       0,
       0,
       0,
       0,
/*95*/ 0,
       0,
       0,
       0};


EXTERN_C_BEGIN
#undef __FUNCT__
#define __FUNCT__ "MatGetDiagonalBlock_MPIBAIJ"
PetscErrorCode MatGetDiagonalBlock_MPIBAIJ(Mat A,PetscTruth *iscopy,MatReuse reuse,Mat *a)
{
  PetscFunctionBegin;
  *a      = ((Mat_MPIBAIJ *)A->data)->A;
  *iscopy = PETSC_FALSE;
  PetscFunctionReturn(0);
}
EXTERN_C_END

EXTERN_C_BEGIN
extern int MatConvert_MPIBAIJ_MPISBAIJ(Mat,const MatType,Mat*);
EXTERN_C_END

#undef __FUNCT__
#define __FUNCT__ "MatMPIBAIJSetPreallocationCSR_MPIBAIJ"
PetscErrorCode MatMPIBAIJSetPreallocationCSR_MPIBAIJ(Mat B,PetscInt bs,const PetscInt I[],const PetscInt J[],const PetscScalar v[])
{
  Mat_MPIBAIJ    *b  = (Mat_MPIBAIJ *)B->data;
  PetscInt       m = B->m/bs,cstart = b->cstart, cend = b->cend,j,nnz,i,d;
  PetscInt       *d_nnz,*o_nnz,nnz_max = 0,rstart = b->rstart,ii;
  const PetscInt *JJ;
  PetscScalar    *values;
  PetscErrorCode ierr;

  PetscFunctionBegin;
#if defined(PETSC_OPT_g)
  if (I[0]) SETERRQ1(PETSC_ERR_ARG_RANGE,"I[0] must be 0 it is %D",I[0]);
#endif
  ierr  = PetscMalloc((2*m+1)*sizeof(PetscInt),&d_nnz);CHKERRQ(ierr);
  o_nnz = d_nnz + m;

  for (i=0; i<m; i++) {
    nnz     = I[i+1]- I[i];
    JJ      = J + I[i];
    nnz_max = PetscMax(nnz_max,nnz);
#if defined(PETSC_OPT_g)
    if (nnz < 0) SETERRQ1(PETSC_ERR_ARG_RANGE,"Local row %D has a negative %D number of columns",i,nnz);
#endif
    for (j=0; j<nnz; j++) {
      if (*JJ >= cstart) break;
      JJ++;
    }
    d = 0;
    for (; j<nnz; j++) {
      if (*JJ++ >= cend) break;
      d++;
    }
    d_nnz[i] = d;
    o_nnz[i] = nnz - d;
  }
  ierr = MatMPIBAIJSetPreallocation(B,bs,0,d_nnz,0,o_nnz);CHKERRQ(ierr);
  ierr = PetscFree(d_nnz);CHKERRQ(ierr);

  if (v) values = (PetscScalar*)v;
  else {
    ierr = PetscMalloc(bs*bs*(nnz_max+1)*sizeof(PetscScalar),&values);CHKERRQ(ierr);
    ierr = PetscMemzero(values,bs*bs*nnz_max*sizeof(PetscScalar));CHKERRQ(ierr);
  }

  ierr = MatSetOption(B,MAT_COLUMNS_SORTED);CHKERRQ(ierr);
  for (i=0; i<m; i++) {
    ii   = i + rstart;
    nnz  = I[i+1]- I[i];
    ierr = MatSetValuesBlocked_MPIBAIJ(B,1,&ii,nnz,J+I[i],values,INSERT_VALUES);CHKERRQ(ierr);
  }
  ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = MatSetOption(B,MAT_COLUMNS_UNSORTED);CHKERRQ(ierr);

  if (!v) {
    ierr = PetscFree(values);CHKERRQ(ierr);
  }
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatMPIBAIJSetPreallocationCSR"
/*@C
   MatMPIBAIJSetPreallocationCSR - Allocates memory for a sparse parallel matrix in AIJ format
   (the default parallel PETSc format).

   Collective on MPI_Comm

   Input Parameters:
+  A - the matrix
.  i - the indices into j for the start of each local row (starts with zero)
.  j - the column indices for each local row (starts with zero) these must be sorted for each row
-  v - optional values in the matrix

   Level: developer

.keywords: matrix, aij, compressed row, sparse, parallel

.seealso: MatCreate(), MatCreateSeqAIJ(), MatSetValues(), MatMPIBAIJSetPreallocation(), MatCreateMPIAIJ(), MPIAIJ
@*/
PetscErrorCode MatMPIBAIJSetPreallocationCSR(Mat B,PetscInt bs,const PetscInt i[],const PetscInt j[], const PetscScalar v[])
{
  PetscErrorCode ierr,(*f)(Mat,PetscInt,const PetscInt[],const PetscInt[],const PetscScalar[]);

  PetscFunctionBegin;
  ierr = PetscObjectQueryFunction((PetscObject)B,"MatMPIBAIJSetPreallocationCSR_C",(void (**)(void))&f);CHKERRQ(ierr);
  if (f) {
    ierr = (*f)(B,bs,i,j,v);CHKERRQ(ierr);
  }
  PetscFunctionReturn(0);
}

EXTERN_C_BEGIN
#undef __FUNCT__
#define __FUNCT__ "MatMPIBAIJSetPreallocation_MPIBAIJ"
PetscErrorCode MatMPIBAIJSetPreallocation_MPIBAIJ(Mat B,PetscInt bs,PetscInt d_nz,PetscInt *d_nnz,PetscInt o_nz,PetscInt *o_nnz)
{
  Mat_MPIBAIJ    *b;
  PetscErrorCode ierr;
  PetscInt       i;

  PetscFunctionBegin;
  B->preallocated = PETSC_TRUE;
  ierr = PetscOptionsGetInt(PETSC_NULL,"-mat_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);

  if (bs < 1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid block size specified, must be positive");
  if (d_nz == PETSC_DEFAULT || d_nz == PETSC_DECIDE) d_nz = 5;
  if (o_nz == PETSC_DEFAULT || o_nz == PETSC_DECIDE) o_nz = 2;
  if (d_nz < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"d_nz cannot be less than 0: value %D",d_nz);
  if (o_nz < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"o_nz cannot be less than 0: value %D",o_nz);
  if (d_nnz) {
  for (i=0; i<B->m/bs; i++) {
      if (d_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"d_nnz cannot be less than -1: local row %D value %D",i,d_nnz[i]);
    }
  }
  if (o_nnz) {
    for (i=0; i<B->m/bs; i++) {
      if (o_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"o_nnz cannot be less than -1: local row %D value %D",i,o_nnz[i]);
    }
  }

  ierr = PetscSplitOwnershipBlock(B->comm,bs,&B->m,&B->M);CHKERRQ(ierr);
  ierr = PetscSplitOwnershipBlock(B->comm,bs,&B->n,&B->N);CHKERRQ(ierr);
  ierr = PetscMapCreateMPI(B->comm,B->m,B->M,&B->rmap);CHKERRQ(ierr);
  ierr = PetscMapCreateMPI(B->comm,B->n,B->N,&B->cmap);CHKERRQ(ierr);

  b = (Mat_MPIBAIJ*)B->data;
  B->bs  = bs;
  b->bs2 = bs*bs;
  b->mbs = B->m/bs;
  b->nbs = B->n/bs;
  b->Mbs = B->M/bs;
  b->Nbs = B->N/bs;

  ierr = MPI_Allgather(&b->mbs,1,MPIU_INT,b->rowners+1,1,MPIU_INT,B->comm);CHKERRQ(ierr);
  b->rowners[0]    = 0;
  for (i=2; i<=b->size; i++) {
    b->rowners[i] += b->rowners[i-1];
  }
  b->rstart    = b->rowners[b->rank];
  b->rend      = b->rowners[b->rank+1];

  ierr = MPI_Allgather(&b->nbs,1,MPIU_INT,b->cowners+1,1,MPIU_INT,B->comm);CHKERRQ(ierr);
  b->cowners[0] = 0;
  for (i=2; i<=b->size; i++) {
    b->cowners[i] += b->cowners[i-1];
  }
  b->cstart    = b->cowners[b->rank];
  b->cend      = b->cowners[b->rank+1];

  for (i=0; i<=b->size; i++) {
    b->rowners_bs[i] = b->rowners[i]*bs;
  }
  b->rstart_bs = b->rstart*bs;
  b->rend_bs   = b->rend*bs;
  b->cstart_bs = b->cstart*bs;
  b->cend_bs   = b->cend*bs;

  ierr = MatCreate(PETSC_COMM_SELF,B->m,B->n,B->m,B->n,&b->A);CHKERRQ(ierr);
  ierr = MatSetType(b->A,MATSEQBAIJ);CHKERRQ(ierr);
  ierr = MatSeqBAIJSetPreallocation(b->A,bs,d_nz,d_nnz);CHKERRQ(ierr);
  PetscLogObjectParent(B,b->A);
  ierr = MatCreate(PETSC_COMM_SELF,B->m,B->N,B->m,B->N,&b->B);CHKERRQ(ierr);
  ierr = MatSetType(b->B,MATSEQBAIJ);CHKERRQ(ierr);
  ierr = MatSeqBAIJSetPreallocation(b->B,bs,o_nz,o_nnz);CHKERRQ(ierr);
  PetscLogObjectParent(B,b->B);

  ierr = MatStashCreate_Private(B->comm,bs,&B->bstash);CHKERRQ(ierr);

  PetscFunctionReturn(0);
}
EXTERN_C_END

EXTERN_C_BEGIN
EXTERN PetscErrorCode MatDiagonalScaleLocal_MPIBAIJ(Mat,Vec);
EXTERN PetscErrorCode MatSetHashTableFactor_MPIBAIJ(Mat,PetscReal);
EXTERN_C_END

/*MC
   MATMPIBAIJ - MATMPIBAIJ = "mpibaij" - A matrix type to be used for distributed block sparse matrices.

   Options Database Keys:
. -mat_type mpibaij - sets the matrix type to "mpibaij" during a call to MatSetFromOptions()

  Level: beginner

.seealso: MatCreateMPIBAIJ
M*/

EXTERN_C_BEGIN
#undef __FUNCT__
#define __FUNCT__ "MatCreate_MPIBAIJ"
PetscErrorCode MatCreate_MPIBAIJ(Mat B)
{
  Mat_MPIBAIJ    *b;
  PetscErrorCode ierr;
  PetscTruth     flg;

  PetscFunctionBegin;
  ierr = PetscNew(Mat_MPIBAIJ,&b);CHKERRQ(ierr);
  B->data = (void*)b;

  ierr    = PetscMemzero(b,sizeof(Mat_MPIBAIJ));CHKERRQ(ierr);
  ierr    = PetscMemcpy(B->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
  B->mapping    = 0;
  B->factor     = 0;
  B->assembled  = PETSC_FALSE;

  B->insertmode = NOT_SET_VALUES;
  ierr = MPI_Comm_rank(B->comm,&b->rank);CHKERRQ(ierr);
  ierr = MPI_Comm_size(B->comm,&b->size);CHKERRQ(ierr);

  /* build local table of row and column ownerships */
  ierr          = PetscMalloc(3*(b->size+2)*sizeof(PetscInt),&b->rowners);CHKERRQ(ierr);
  PetscLogObjectMemory(B,3*(b->size+2)*sizeof(PetscInt)+sizeof(struct _p_Mat)+sizeof(Mat_MPIBAIJ));
  b->cowners    = b->rowners + b->size + 2;
  b->rowners_bs = b->cowners + b->size + 2;

  /* build cache for off array entries formed */
  ierr = MatStashCreate_Private(B->comm,1,&B->stash);CHKERRQ(ierr);
  b->donotstash  = PETSC_FALSE;
  b->colmap      = PETSC_NULL;
  b->garray      = PETSC_NULL;
  b->roworiented = PETSC_TRUE;

#if defined(PETSC_USE_MAT_SINGLE)
  /* stuff for MatSetValues_XXX in single precision */
  b->setvalueslen     = 0;
  b->setvaluescopy    = PETSC_NULL;
#endif

  /* stuff used in block assembly */
  b->barray       = 0;

  /* stuff used for matrix vector multiply */
  b->lvec         = 0;
  b->Mvctx        = 0;

  /* stuff for MatGetRow() */
  b->rowindices   = 0;
  b->rowvalues    = 0;
  b->getrowactive = PETSC_FALSE;

  /* hash table stuff */
  b->ht           = 0;
  b->hd           = 0;
  b->ht_size      = 0;
  b->ht_flag      = PETSC_FALSE;
  b->ht_fact      = 0;
  b->ht_total_ct  = 0;
  b->ht_insert_ct = 0;

  ierr = PetscOptionsHasName(PETSC_NULL,"-mat_use_hash_table",&flg);CHKERRQ(ierr);
  if (flg) {
    PetscReal fact = 1.39;
    ierr = MatSetOption(B,MAT_USE_HASH_TABLE);CHKERRQ(ierr);
    ierr = PetscOptionsGetReal(PETSC_NULL,"-mat_use_hash_table",&fact,PETSC_NULL);CHKERRQ(ierr);
    if (fact <= 1.0) fact = 1.39;
    ierr = MatMPIBAIJSetHashTableFactor(B,fact);CHKERRQ(ierr);
    PetscLogInfo(0,"MatCreateMPIBAIJ:Hash table Factor used %5.2f\n",fact);
  }
  ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatStoreValues_C",
                                     "MatStoreValues_MPIBAIJ",
                                     MatStoreValues_MPIBAIJ);CHKERRQ(ierr);
  ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatRetrieveValues_C",
                                     "MatRetrieveValues_MPIBAIJ",
                                     MatRetrieveValues_MPIBAIJ);CHKERRQ(ierr);
  ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatGetDiagonalBlock_C",
                                     "MatGetDiagonalBlock_MPIBAIJ",
                                     MatGetDiagonalBlock_MPIBAIJ);CHKERRQ(ierr);
  ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatMPIBAIJSetPreallocation_C",
                                     "MatMPIBAIJSetPreallocation_MPIBAIJ",
                                     MatMPIBAIJSetPreallocation_MPIBAIJ);CHKERRQ(ierr);
  ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatMPIBAIJSetPreallocationCSR_C",
				     "MatMPIBAIJSetPreallocationCSR_MPIAIJ",
				     MatMPIBAIJSetPreallocationCSR_MPIBAIJ);CHKERRQ(ierr);
  ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatDiagonalScaleLocal_C",
                                     "MatDiagonalScaleLocal_MPIBAIJ",
                                     MatDiagonalScaleLocal_MPIBAIJ);CHKERRQ(ierr);
  ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatSetHashTableFactor_C",
                                     "MatSetHashTableFactor_MPIBAIJ",
                                     MatSetHashTableFactor_MPIBAIJ);CHKERRQ(ierr);
  PetscFunctionReturn(0);
}
EXTERN_C_END

/*MC
   MATBAIJ - MATBAIJ = "baij" - A matrix type to be used for block sparse matrices.

   This matrix type is identical to MATSEQBAIJ when constructed with a single process communicator,
   and MATMPIBAIJ otherwise.

   Options Database Keys:
. -mat_type baij - sets the matrix type to "baij" during a call to MatSetFromOptions()

  Level: beginner

.seealso: MatCreateMPIBAIJ(),MATSEQBAIJ,MATMPIBAIJ, MatMPIBAIJSetPreallocation(), MatMPIBAIJSetPreallocationCSR()
M*/

EXTERN_C_BEGIN
#undef __FUNCT__
#define __FUNCT__ "MatCreate_BAIJ"
PetscErrorCode MatCreate_BAIJ(Mat A)
{
  PetscErrorCode ierr;
  PetscMPIInt    size;

  PetscFunctionBegin;
  ierr = PetscObjectChangeTypeName((PetscObject)A,MATBAIJ);CHKERRQ(ierr);
  ierr = MPI_Comm_size(A->comm,&size);CHKERRQ(ierr);
  if (size == 1) {
    ierr = MatSetType(A,MATSEQBAIJ);CHKERRQ(ierr);
  } else {
    ierr = MatSetType(A,MATMPIBAIJ);CHKERRQ(ierr);
  }
  PetscFunctionReturn(0);
}
EXTERN_C_END

#undef __FUNCT__
#define __FUNCT__ "MatMPIBAIJSetPreallocation"
/*@C
   MatMPIBAIJSetPreallocation - Allocates memory for a sparse parallel matrix in block AIJ format
   (block compressed row).  For good matrix assembly performance
   the user should preallocate the matrix storage by setting the parameters
   d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
   performance can be increased by more than a factor of 50.

   Collective on Mat

   Input Parameters:
+  A - the matrix
.  bs   - size of blockk
.  d_nz  - number of block nonzeros per block row in diagonal portion of local
           submatrix  (same for all local rows)
.  d_nnz - array containing the number of block nonzeros in the various block rows
           of the in diagonal portion of the local (possibly different for each block
           row) or PETSC_NULL.  You must leave room for the diagonal entry even if it is zero.
.  o_nz  - number of block nonzeros per block row in the off-diagonal portion of local
           submatrix (same for all local rows).
-  o_nnz - array containing the number of nonzeros in the various block rows of the
           off-diagonal portion of the local submatrix (possibly different for
           each block row) or PETSC_NULL.

   If the *_nnz parameter is given then the *_nz parameter is ignored

   Options Database Keys:
.   -mat_no_unroll - uses code that does not unroll the loops in the
                     block calculations (much slower)
.   -mat_block_size - size of the blocks to use

   Notes:
   If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
   than it must be used on all processors that share the object for that argument.

   Storage Information:
   For a square global matrix we define each processor's diagonal portion
   to be its local rows and the corresponding columns (a square submatrix);
   each processor's off-diagonal portion encompasses the remainder of the
   local matrix (a rectangular submatrix).

   The user can specify preallocated storage for the diagonal part of
   the local submatrix with either d_nz or d_nnz (not both).  Set
   d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
   memory allocation.  Likewise, specify preallocated storage for the
   off-diagonal part of the local submatrix with o_nz or o_nnz (not both).

   Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
   the figure below we depict these three local rows and all columns (0-11).

.vb
           0 1 2 3 4 5 6 7 8 9 10 11
          -------------------
   row 3  |  o o o d d d o o o o o o
   row 4  |  o o o d d d o o o o o o
   row 5  |  o o o d d d o o o o o o
          -------------------
.ve

   Thus, any entries in the d locations are stored in the d (diagonal)
   submatrix, and any entries in the o locations are stored in the
   o (off-diagonal) submatrix.  Note that the d and the o submatrices are
   stored simply in the MATSEQBAIJ format for compressed row storage.

   Now d_nz should indicate the number of block nonzeros per row in the d matrix,
   and o_nz should indicate the number of block nonzeros per row in the o matrix.
   In general, for PDE problems in which most nonzeros are near the diagonal,
   one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
   or you will get TERRIBLE performance; see the users' manual chapter on
   matrices.

   Level: intermediate

.keywords: matrix, block, aij, compressed row, sparse, parallel

.seealso: MatCreate(), MatCreateSeqBAIJ(), MatSetValues(), MatCreateMPIBAIJ(), MatMPIBAIJSetPreallocationCSR()
@*/
PetscErrorCode MatMPIBAIJSetPreallocation(Mat B,PetscInt bs,PetscInt d_nz,const PetscInt d_nnz[],PetscInt o_nz,const PetscInt o_nnz[])
{
  PetscErrorCode ierr,(*f)(Mat,PetscInt,PetscInt,const PetscInt[],PetscInt,const PetscInt[]);

  PetscFunctionBegin;
  ierr = PetscObjectQueryFunction((PetscObject)B,"MatMPIBAIJSetPreallocation_C",(void (**)(void))&f);CHKERRQ(ierr);
  if (f) {
    ierr = (*f)(B,bs,d_nz,d_nnz,o_nz,o_nnz);CHKERRQ(ierr);
  }
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatCreateMPIBAIJ"
/*@C
   MatCreateMPIBAIJ - Creates a sparse parallel matrix in block AIJ format
   (block compressed row).  For good matrix assembly performance
   the user should preallocate the matrix storage by setting the parameters
   d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
   performance can be increased by more than a factor of 50.

   Collective on MPI_Comm

   Input Parameters:
+  comm - MPI communicator
.  bs   - size of blockk
.  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
           This value should be the same as the local size used in creating the
           y vector for the matrix-vector product y = Ax.
.  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
           This value should be the same as the local size used in creating the
           x vector for the matrix-vector product y = Ax.
.  M - number of global rows (or PETSC_DETERMINE to have calculated if m is given)
.  N - number of global columns (or PETSC_DETERMINE to have calculated if n is given)
.  d_nz  - number of nonzero blocks per block row in diagonal portion of local
           submatrix  (same for all local rows)
.  d_nnz - array containing the number of nonzero blocks in the various block rows
           of the in diagonal portion of the local (possibly different for each block
           row) or PETSC_NULL.  You must leave room for the diagonal entry even if it is zero.
.  o_nz  - number of nonzero blocks per block row in the off-diagonal portion of local
           submatrix (same for all local rows).
-  o_nnz - array containing the number of nonzero blocks in the various block rows of the
           off-diagonal portion of the local submatrix (possibly different for
           each block row) or PETSC_NULL.

   Output Parameter:
.  A - the matrix

   Options Database Keys:
.   -mat_no_unroll - uses code that does not unroll the loops in the
                     block calculations (much slower)
.   -mat_block_size - size of the blocks to use

   Notes:
   If the *_nnz parameter is given then the *_nz parameter is ignored

   A nonzero block is any block that as 1 or more nonzeros in it

   The user MUST specify either the local or global matrix dimensions
   (possibly both).

   If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
   than it must be used on all processors that share the object for that argument.

   Storage Information:
   For a square global matrix we define each processor's diagonal portion
   to be its local rows and the corresponding columns (a square submatrix);
   each processor's off-diagonal portion encompasses the remainder of the
   local matrix (a rectangular submatrix).

   The user can specify preallocated storage for the diagonal part of
   the local submatrix with either d_nz or d_nnz (not both).  Set
   d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
   memory allocation.  Likewise, specify preallocated storage for the
   off-diagonal part of the local submatrix with o_nz or o_nnz (not both).

   Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
   the figure below we depict these three local rows and all columns (0-11).

.vb
           0 1 2 3 4 5 6 7 8 9 10 11
          -------------------
   row 3  |  o o o d d d o o o o o o
   row 4  |  o o o d d d o o o o o o
   row 5  |  o o o d d d o o o o o o
          -------------------
.ve

   Thus, any entries in the d locations are stored in the d (diagonal)
   submatrix, and any entries in the o locations are stored in the
   o (off-diagonal) submatrix.  Note that the d and the o submatrices are
   stored simply in the MATSEQBAIJ format for compressed row storage.

   Now d_nz should indicate the number of block nonzeros per row in the d matrix,
   and o_nz should indicate the number of block nonzeros per row in the o matrix.
   In general, for PDE problems in which most nonzeros are near the diagonal,
   one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
   or you will get TERRIBLE performance; see the users' manual chapter on
   matrices.

   Level: intermediate

.keywords: matrix, block, aij, compressed row, sparse, parallel

.seealso: MatCreate(), MatCreateSeqBAIJ(), MatSetValues(), MatCreateMPIBAIJ(), MatMPIBAIJSetPreallocation(), MatMPIBAIJSetPreallocationCSR()
@*/
PetscErrorCode MatCreateMPIBAIJ(MPI_Comm comm,PetscInt bs,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscInt d_nz,const PetscInt d_nnz[],PetscInt o_nz,const PetscInt o_nnz[],Mat *A)
{
  PetscErrorCode ierr;
  PetscMPIInt    size;

  PetscFunctionBegin;
  ierr = MatCreate(comm,m,n,M,N,A);CHKERRQ(ierr);
  ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
  if (size > 1) {
    ierr = MatSetType(*A,MATMPIBAIJ);CHKERRQ(ierr);
    ierr = MatMPIBAIJSetPreallocation(*A,bs,d_nz,d_nnz,o_nz,o_nnz);CHKERRQ(ierr);
  } else {
    ierr = MatSetType(*A,MATSEQBAIJ);CHKERRQ(ierr);
    ierr = MatSeqBAIJSetPreallocation(*A,bs,d_nz,d_nnz);CHKERRQ(ierr);
  }
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatDuplicate_MPIBAIJ"
static PetscErrorCode MatDuplicate_MPIBAIJ(Mat matin,MatDuplicateOption cpvalues,Mat *newmat)
{
  Mat            mat;
  Mat_MPIBAIJ    *a,*oldmat = (Mat_MPIBAIJ*)matin->data;
  PetscErrorCode ierr;
  PetscInt       len=0;

  PetscFunctionBegin;
  *newmat       = 0;
  ierr = MatCreate(matin->comm,matin->m,matin->n,matin->M,matin->N,&mat);CHKERRQ(ierr);
  ierr = MatSetType(mat,matin->type_name);CHKERRQ(ierr);
  ierr = PetscMemcpy(mat->ops,matin->ops,sizeof(struct _MatOps));CHKERRQ(ierr);

  mat->factor       = matin->factor;
  mat->preallocated = PETSC_TRUE;
  mat->assembled    = PETSC_TRUE;
  mat->insertmode   = NOT_SET_VALUES;

  a      = (Mat_MPIBAIJ*)mat->data;
  mat->bs  = matin->bs;
  a->bs2   = oldmat->bs2;
  a->mbs   = oldmat->mbs;
  a->nbs   = oldmat->nbs;
  a->Mbs   = oldmat->Mbs;
  a->Nbs   = oldmat->Nbs;

  a->rstart       = oldmat->rstart;
  a->rend         = oldmat->rend;
  a->cstart       = oldmat->cstart;
  a->cend         = oldmat->cend;
  a->size         = oldmat->size;
  a->rank         = oldmat->rank;
  a->donotstash   = oldmat->donotstash;
  a->roworiented  = oldmat->roworiented;
  a->rowindices   = 0;
  a->rowvalues    = 0;
  a->getrowactive = PETSC_FALSE;
  a->barray       = 0;
  a->rstart_bs    = oldmat->rstart_bs;
  a->rend_bs      = oldmat->rend_bs;
  a->cstart_bs    = oldmat->cstart_bs;
  a->cend_bs      = oldmat->cend_bs;

  /* hash table stuff */
  a->ht           = 0;
  a->hd           = 0;
  a->ht_size      = 0;
  a->ht_flag      = oldmat->ht_flag;
  a->ht_fact      = oldmat->ht_fact;
  a->ht_total_ct  = 0;
  a->ht_insert_ct = 0;

  ierr = PetscMemcpy(a->rowners,oldmat->rowners,3*(a->size+2)*sizeof(PetscInt));CHKERRQ(ierr);
  ierr = MatStashCreate_Private(matin->comm,1,&mat->stash);CHKERRQ(ierr);
  ierr = MatStashCreate_Private(matin->comm,matin->bs,&mat->bstash);CHKERRQ(ierr);
  if (oldmat->colmap) {
#if defined (PETSC_USE_CTABLE)
  ierr = PetscTableCreateCopy(oldmat->colmap,&a->colmap);CHKERRQ(ierr);
#else
  ierr = PetscMalloc((a->Nbs)*sizeof(PetscInt),&a->colmap);CHKERRQ(ierr);
  PetscLogObjectMemory(mat,(a->Nbs)*sizeof(PetscInt));
  ierr = PetscMemcpy(a->colmap,oldmat->colmap,(a->Nbs)*sizeof(PetscInt));CHKERRQ(ierr);
#endif
  } else a->colmap = 0;

  if (oldmat->garray && (len = ((Mat_SeqBAIJ*)(oldmat->B->data))->nbs)) {
    ierr = PetscMalloc(len*sizeof(PetscInt),&a->garray);CHKERRQ(ierr);
    PetscLogObjectMemory(mat,len*sizeof(PetscInt));
    ierr = PetscMemcpy(a->garray,oldmat->garray,len*sizeof(PetscInt));CHKERRQ(ierr);
  } else a->garray = 0;

  ierr =  VecDuplicate(oldmat->lvec,&a->lvec);CHKERRQ(ierr);
  PetscLogObjectParent(mat,a->lvec);
  ierr =  VecScatterCopy(oldmat->Mvctx,&a->Mvctx);CHKERRQ(ierr);
  PetscLogObjectParent(mat,a->Mvctx);

  ierr =  MatDuplicate(oldmat->A,cpvalues,&a->A);CHKERRQ(ierr);
  PetscLogObjectParent(mat,a->A);
  ierr =  MatDuplicate(oldmat->B,cpvalues,&a->B);CHKERRQ(ierr);
  PetscLogObjectParent(mat,a->B);
  ierr = PetscFListDuplicate(matin->qlist,&mat->qlist);CHKERRQ(ierr);
  *newmat = mat;

  PetscFunctionReturn(0);
}

#include "petscsys.h"

#undef __FUNCT__
#define __FUNCT__ "MatLoad_MPIBAIJ"
PetscErrorCode MatLoad_MPIBAIJ(PetscViewer viewer,const MatType type,Mat *newmat)
{
  Mat            A;
  PetscErrorCode ierr;
  int            fd;
  PetscInt       i,nz,j,rstart,rend;
  PetscScalar    *vals,*buf;
  MPI_Comm       comm = ((PetscObject)viewer)->comm;
  MPI_Status     status;
  PetscMPIInt    rank,size,maxnz;
  PetscInt       header[4],*rowlengths = 0,M,N,m,*rowners,*cols;
  PetscInt       *locrowlens,*procsnz = 0,*browners;
  PetscInt       jj,*mycols,*ibuf,bs=1,Mbs,mbs,extra_rows;
  PetscMPIInt    tag = ((PetscObject)viewer)->tag;
  PetscInt       *dlens,*odlens,*mask,*masked1,*masked2,rowcount,odcount;
  PetscInt       dcount,kmax,k,nzcount,tmp,mend;

  PetscFunctionBegin;
  ierr = PetscOptionsGetInt(PETSC_NULL,"-matload_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);

  ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
  ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
  if (!rank) {
    ierr = PetscViewerBinaryGetDescriptor(viewer,&fd);CHKERRQ(ierr);
    ierr = PetscBinaryRead(fd,(char *)header,4,PETSC_INT);CHKERRQ(ierr);
    if (header[0] != MAT_FILE_COOKIE) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"not matrix object");
  }

  ierr = MPI_Bcast(header+1,3,MPIU_INT,0,comm);CHKERRQ(ierr);
  M = header[1]; N = header[2];

  if (M != N) SETERRQ(PETSC_ERR_SUP,"Can only do square matrices");

  /*
     This code adds extra rows to make sure the number of rows is
     divisible by the blocksize
  */
  Mbs        = M/bs;
  extra_rows = bs - M + bs*Mbs;
  if (extra_rows == bs) extra_rows = 0;
  else                  Mbs++;
  if (extra_rows && !rank) {
    PetscLogInfo(0,"MatLoad_MPIBAIJ:Padding loaded matrix to match blocksize\n");
  }

  /* determine ownership of all rows */
  mbs        = Mbs/size + ((Mbs % size) > rank);
  m          = mbs*bs;
  ierr       = PetscMalloc2(size+1,PetscInt,&rowners,size+1,PetscInt,&browners);CHKERRQ(ierr);
  ierr       = MPI_Allgather(&mbs,1,MPIU_INT,rowners+1,1,MPIU_INT,comm);CHKERRQ(ierr);
  rowners[0] = 0;
  for (i=2; i<=size; i++)  rowners[i] += rowners[i-1];
  for (i=0; i<=size;  i++) browners[i] = rowners[i]*bs;
  rstart = rowners[rank];
  rend   = rowners[rank+1];

  /* distribute row lengths to all processors */
  ierr = PetscMalloc(m*sizeof(PetscInt),&locrowlens);CHKERRQ(ierr);
  if (!rank) {
    mend = m;
    if (size == 1) mend = mend - extra_rows;
    ierr = PetscBinaryRead(fd,locrowlens,mend,PETSC_INT);CHKERRQ(ierr);
    for (j=mend; j<m; j++) locrowlens[j] = 1;
    ierr = PetscMalloc(m*sizeof(PetscInt),&rowlengths);CHKERRQ(ierr);
    ierr = PetscMalloc(size*sizeof(PetscInt),&procsnz);CHKERRQ(ierr);
    ierr = PetscMemzero(procsnz,size*sizeof(PetscInt));CHKERRQ(ierr);
    for (j=0; j<m; j++) {
      procsnz[0] += locrowlens[j];
    }
    for (i=1; i<size; i++) {
      mend = browners[i+1] - browners[i];
      if (i == size-1) mend = mend - extra_rows;
      ierr = PetscBinaryRead(fd,rowlengths,mend,PETSC_INT);CHKERRQ(ierr);
      for (j=mend; j<browners[i+1] - browners[i]; j++) rowlengths[j] = 1;
      /* calculate the number of nonzeros on each processor */
      for (j=0; j<browners[i+1]-browners[i]; j++) {
        procsnz[i] += rowlengths[j];
      }
      ierr = MPI_Send(rowlengths,browners[i+1]-browners[i],MPIU_INT,i,tag,comm);CHKERRQ(ierr);
    }
    ierr = PetscFree(rowlengths);CHKERRQ(ierr);
  } else {
    ierr = MPI_Recv(locrowlens,m,MPIU_INT,0,tag,comm,&status);CHKERRQ(ierr);
  }

  if (!rank) {
    /* determine max buffer needed and allocate it */
    maxnz = procsnz[0];
    for (i=1; i<size; i++) {
      maxnz = PetscMax(maxnz,procsnz[i]);
    }
    ierr = PetscMalloc(maxnz*sizeof(PetscInt),&cols);CHKERRQ(ierr);

    /* read in my part of the matrix column indices  */
    nz     = procsnz[0];
    ierr   = PetscMalloc(nz*sizeof(PetscInt),&ibuf);CHKERRQ(ierr);
    mycols = ibuf;
    if (size == 1)  nz -= extra_rows;
    ierr = PetscBinaryRead(fd,mycols,nz,PETSC_INT);CHKERRQ(ierr);
    if (size == 1)  for (i=0; i< extra_rows; i++) { mycols[nz+i] = M+i; }

    /* read in every ones (except the last) and ship off */
    for (i=1; i<size-1; i++) {
      nz   = procsnz[i];
      ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
      ierr = MPI_Send(cols,nz,MPIU_INT,i,tag,comm);CHKERRQ(ierr);
    }
    /* read in the stuff for the last proc */
    if (size != 1) {
      nz   = procsnz[size-1] - extra_rows;  /* the extra rows are not on the disk */
      ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
      for (i=0; i<extra_rows; i++) cols[nz+i] = M+i;
      ierr = MPI_Send(cols,nz+extra_rows,MPIU_INT,size-1,tag,comm);CHKERRQ(ierr);
    }
    ierr = PetscFree(cols);CHKERRQ(ierr);
  } else {
    /* determine buffer space needed for message */
    nz = 0;
    for (i=0; i<m; i++) {
      nz += locrowlens[i];
    }
    ierr   = PetscMalloc(nz*sizeof(PetscInt),&ibuf);CHKERRQ(ierr);
    mycols = ibuf;
    /* receive message of column indices*/
    ierr = MPI_Recv(mycols,nz,MPIU_INT,0,tag,comm,&status);CHKERRQ(ierr);
    ierr = MPI_Get_count(&status,MPIU_INT,&maxnz);CHKERRQ(ierr);
    if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
  }

  /* loop over local rows, determining number of off diagonal entries */
  ierr     = PetscMalloc2(rend-rstart,PetscInt,&dlens,rend-rstart,PetscInt,&odlens);CHKERRQ(ierr);
  ierr     = PetscMalloc3(Mbs,PetscInt,&mask,Mbs,PetscInt,&masked1,Mbs,PetscInt,&masked2);CHKERRQ(ierr);
  ierr     = PetscMemzero(mask,Mbs*sizeof(PetscInt));CHKERRQ(ierr);
  ierr     = PetscMemzero(masked1,Mbs*sizeof(PetscInt));CHKERRQ(ierr);
  ierr     = PetscMemzero(masked2,Mbs*sizeof(PetscInt));CHKERRQ(ierr);
  rowcount = 0; nzcount = 0;
  for (i=0; i<mbs; i++) {
    dcount  = 0;
    odcount = 0;
    for (j=0; j<bs; j++) {
      kmax = locrowlens[rowcount];
      for (k=0; k<kmax; k++) {
        tmp = mycols[nzcount++]/bs;
        if (!mask[tmp]) {
          mask[tmp] = 1;
          if (tmp < rstart || tmp >= rend) masked2[odcount++] = tmp;
          else masked1[dcount++] = tmp;
        }
      }
      rowcount++;
    }

    dlens[i]  = dcount;
    odlens[i] = odcount;

    /* zero out the mask elements we set */
    for (j=0; j<dcount; j++) mask[masked1[j]] = 0;
    for (j=0; j<odcount; j++) mask[masked2[j]] = 0;
  }

  /* create our matrix */
  ierr = MatCreate(comm,m,m,M+extra_rows,N+extra_rows,&A);CHKERRQ(ierr);
  ierr = MatSetType(A,type);CHKERRQ(ierr)
  ierr = MatMPIBAIJSetPreallocation(A,bs,0,dlens,0,odlens);CHKERRQ(ierr);

  /* Why doesn't this called using ierr = MatSetOption(A,MAT_COLUMNS_SORTED);CHKERRQ(ierr); */
  ierr = MatSetOption(A,MAT_COLUMNS_SORTED);CHKERRQ(ierr);

  if (!rank) {
    ierr = PetscMalloc(maxnz*sizeof(PetscScalar),&buf);CHKERRQ(ierr);
    /* read in my part of the matrix numerical values  */
    nz = procsnz[0];
    vals = buf;
    mycols = ibuf;
    if (size == 1)  nz -= extra_rows;
    ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
    if (size == 1)  for (i=0; i< extra_rows; i++) { vals[nz+i] = 1.0; }

    /* insert into matrix */
    jj      = rstart*bs;
    for (i=0; i<m; i++) {
      ierr = MatSetValues_MPIBAIJ(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
      mycols += locrowlens[i];
      vals   += locrowlens[i];
      jj++;
    }
    /* read in other processors (except the last one) and ship out */
    for (i=1; i<size-1; i++) {
      nz   = procsnz[i];
      vals = buf;
      ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
      ierr = MPI_Send(vals,nz,MPIU_SCALAR,i,A->tag,comm);CHKERRQ(ierr);
    }
    /* the last proc */
    if (size != 1){
      nz   = procsnz[i] - extra_rows;
      vals = buf;
      ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
      for (i=0; i<extra_rows; i++) vals[nz+i] = 1.0;
      ierr = MPI_Send(vals,nz+extra_rows,MPIU_SCALAR,size-1,A->tag,comm);CHKERRQ(ierr);
    }
    ierr = PetscFree(procsnz);CHKERRQ(ierr);
  } else {
    /* receive numeric values */
    ierr = PetscMalloc(nz*sizeof(PetscScalar),&buf);CHKERRQ(ierr);

    /* receive message of values*/
    vals   = buf;
    mycols = ibuf;
    ierr   = MPI_Recv(vals,nz,MPIU_SCALAR,0,A->tag,comm,&status);CHKERRQ(ierr);
    ierr   = MPI_Get_count(&status,MPIU_SCALAR,&maxnz);CHKERRQ(ierr);
    if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");

    /* insert into matrix */
    jj      = rstart*bs;
    for (i=0; i<m; i++) {
      ierr    = MatSetValues_MPIBAIJ(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
      mycols += locrowlens[i];
      vals   += locrowlens[i];
      jj++;
    }
  }
  ierr = PetscFree(locrowlens);CHKERRQ(ierr);
  ierr = PetscFree(buf);CHKERRQ(ierr);
  ierr = PetscFree(ibuf);CHKERRQ(ierr);
  ierr = PetscFree2(rowners,browners);CHKERRQ(ierr);
  ierr = PetscFree2(dlens,odlens);CHKERRQ(ierr);
  ierr = PetscFree3(mask,masked1,masked2);CHKERRQ(ierr);
  ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
  ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);

  *newmat = A;
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatMPIBAIJSetHashTableFactor"
/*@
   MatMPIBAIJSetHashTableFactor - Sets the factor required to compute the size of the HashTable.

   Input Parameters:
.  mat  - the matrix
.  fact - factor

   Collective on Mat

   Level: advanced

  Notes:
   This can also be set by the command line option: -mat_use_hash_table fact

.keywords: matrix, hashtable, factor, HT

.seealso: MatSetOption()
@*/
PetscErrorCode MatMPIBAIJSetHashTableFactor(Mat mat,PetscReal fact)
{
  PetscErrorCode ierr,(*f)(Mat,PetscReal);

  PetscFunctionBegin;
  ierr = PetscObjectQueryFunction((PetscObject)mat,"MatSetHashTableFactor_C",(void (**)(void))&f);CHKERRQ(ierr);
  if (f) {
    ierr = (*f)(mat,fact);CHKERRQ(ierr);
  }
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatSetHashTableFactor_MPIBAIJ"
PetscErrorCode MatSetHashTableFactor_MPIBAIJ(Mat mat,PetscReal fact)
{
  Mat_MPIBAIJ *baij;

  PetscFunctionBegin;
  baij = (Mat_MPIBAIJ*)mat->data;
  baij->ht_fact = fact;
  PetscFunctionReturn(0);
}

#undef __FUNCT__
#define __FUNCT__ "MatMPIBAIJGetSeqBAIJ"
PetscErrorCode MatMPIBAIJGetSeqBAIJ(Mat A,Mat *Ad,Mat *Ao,PetscInt *colmap[])
{
  Mat_MPIBAIJ *a = (Mat_MPIBAIJ *)A->data;
  PetscFunctionBegin;
  *Ad     = a->A;
  *Ao     = a->B;
  *colmap = a->garray;
  PetscFunctionReturn(0);
}