xref: /petsc/src/mat/impls/baij/mpi/mpibaij.c (revision d03495bd6a90c318a635ff2f45c05071e91761ec)
1*d03495bdSKris Buschelman /*$Id: mpibaij.c,v 1.223 2001/06/21 22:08:18 buschelm Exp buschelm $*/
279bdfe76SSatish Balay 
3e090d566SSatish Balay #include "src/mat/impls/baij/mpi/mpibaij.h"   /*I  "petscmat.h"  I*/
4c16cb8f2SBarry Smith #include "src/vec/vecimpl.h"
579bdfe76SSatish Balay 
6ca44d042SBarry Smith EXTERN int MatSetUpMultiply_MPIBAIJ(Mat);
7ca44d042SBarry Smith EXTERN int DisAssemble_MPIBAIJ(Mat);
8ca44d042SBarry Smith EXTERN int MatIncreaseOverlap_MPIBAIJ(Mat,int,IS *,int);
9ca44d042SBarry Smith EXTERN int MatGetSubMatrices_MPIBAIJ(Mat,int,IS *,IS *,MatReuse,Mat **);
10ca44d042SBarry Smith EXTERN int MatGetValues_SeqBAIJ(Mat,int,int *,int,int *,Scalar *);
11ca44d042SBarry Smith EXTERN int MatSetValues_SeqBAIJ(Mat,int,int *,int,int *,Scalar *,InsertMode);
12ca44d042SBarry Smith EXTERN int MatSetValuesBlocked_SeqBAIJ(Mat,int,int*,int,int*,Scalar*,InsertMode);
13ca44d042SBarry Smith EXTERN int MatGetRow_SeqBAIJ(Mat,int,int*,int**,Scalar**);
14ca44d042SBarry Smith EXTERN int MatRestoreRow_SeqBAIJ(Mat,int,int*,int**,Scalar**);
15ca44d042SBarry Smith EXTERN int MatPrintHelp_SeqBAIJ(Mat);
16ca44d042SBarry Smith EXTERN int MatZeroRows_SeqBAIJ(Mat,IS,Scalar*);
1793fea6afSBarry Smith 
1893fea6afSBarry Smith /*  UGLY, ugly, ugly
1993fea6afSBarry Smith    When MatScalar == Scalar the function MatSetValuesBlocked_MPIBAIJ_MatScalar() does
2093fea6afSBarry Smith    not exist. Otherwise ..._MatScalar() takes matrix elements in single precision and
2193fea6afSBarry Smith    inserts them into the single precision data structure. The function MatSetValuesBlocked_MPIBAIJ()
2293fea6afSBarry Smith    converts the entries into single precision and then calls ..._MatScalar() to put them
2393fea6afSBarry Smith    into the single precision data structures.
2493fea6afSBarry Smith */
2593fea6afSBarry Smith #if defined(PETSC_USE_MAT_SINGLE)
26ca44d042SBarry Smith EXTERN int MatSetValuesBlocked_SeqBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
27ca44d042SBarry Smith EXTERN int MatSetValues_MPIBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
28ca44d042SBarry Smith EXTERN int MatSetValuesBlocked_MPIBAIJ_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
29ca44d042SBarry Smith EXTERN int MatSetValues_MPIBAIJ_HT_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
30ca44d042SBarry Smith EXTERN int MatSetValuesBlocked_MPIBAIJ_HT_MatScalar(Mat,int,int*,int,int*,MatScalar*,InsertMode);
3193fea6afSBarry Smith #else
326fa18ffdSBarry Smith #define MatSetValuesBlocked_SeqBAIJ_MatScalar      MatSetValuesBlocked_SeqBAIJ
3393fea6afSBarry Smith #define MatSetValues_MPIBAIJ_MatScalar             MatSetValues_MPIBAIJ
3493fea6afSBarry Smith #define MatSetValuesBlocked_MPIBAIJ_MatScalar      MatSetValuesBlocked_MPIBAIJ
356fa18ffdSBarry Smith #define MatSetValues_MPIBAIJ_HT_MatScalar          MatSetValues_MPIBAIJ_HT
366fa18ffdSBarry Smith #define MatSetValuesBlocked_MPIBAIJ_HT_MatScalar   MatSetValuesBlocked_MPIBAIJ_HT
3793fea6afSBarry Smith #endif
383b2fbd54SBarry Smith 
394a2ae208SSatish Balay #undef __FUNCT__
404a2ae208SSatish Balay #define __FUNCT__ "MatGetRowMax_MPIBAIJ"
417843d17aSBarry Smith int MatGetRowMax_MPIBAIJ(Mat A,Vec v)
427843d17aSBarry Smith {
437843d17aSBarry Smith   Mat_MPIBAIJ  *a = (Mat_MPIBAIJ*)A->data;
447843d17aSBarry Smith   int          ierr,i;
45273d9f13SBarry Smith   Scalar       *va,*vb;
467843d17aSBarry Smith   Vec          vtmp;
477843d17aSBarry Smith 
487843d17aSBarry Smith   PetscFunctionBegin;
497843d17aSBarry Smith 
507843d17aSBarry Smith   ierr = MatGetRowMax(a->A,v);CHKERRQ(ierr);
51273d9f13SBarry Smith   ierr = VecGetArray(v,&va);CHKERRQ(ierr);
527843d17aSBarry Smith 
53ac355199SBarry Smith   ierr = VecCreateSeq(PETSC_COMM_SELF,A->m,&vtmp);CHKERRQ(ierr);
547843d17aSBarry Smith   ierr = MatGetRowMax(a->B,vtmp);CHKERRQ(ierr);
55273d9f13SBarry Smith   ierr = VecGetArray(vtmp,&vb);CHKERRQ(ierr);
567843d17aSBarry Smith 
57273d9f13SBarry Smith   for (i=0; i<A->m; i++){
58273d9f13SBarry Smith     if (PetscAbsScalar(va[i]) < PetscAbsScalar(vb[i])) va[i] = vb[i];
597843d17aSBarry Smith   }
607843d17aSBarry Smith 
617843d17aSBarry Smith   ierr = VecRestoreArray(v,&va);CHKERRQ(ierr);
627843d17aSBarry Smith   ierr = VecRestoreArray(vtmp,&vb);CHKERRQ(ierr);
63ac355199SBarry Smith   ierr = VecDestroy(vtmp);CHKERRQ(ierr);
647843d17aSBarry Smith 
657843d17aSBarry Smith   PetscFunctionReturn(0);
667843d17aSBarry Smith }
677843d17aSBarry Smith 
687fc3c18eSBarry Smith EXTERN_C_BEGIN
694a2ae208SSatish Balay #undef __FUNCT__
704a2ae208SSatish Balay #define __FUNCT__ "MatStoreValues_MPIBAIJ"
717fc3c18eSBarry Smith int MatStoreValues_MPIBAIJ(Mat mat)
727fc3c18eSBarry Smith {
737fc3c18eSBarry Smith   Mat_MPIBAIJ *aij = (Mat_MPIBAIJ *)mat->data;
747fc3c18eSBarry Smith   int         ierr;
757fc3c18eSBarry Smith 
767fc3c18eSBarry Smith   PetscFunctionBegin;
777fc3c18eSBarry Smith   ierr = MatStoreValues(aij->A);CHKERRQ(ierr);
787fc3c18eSBarry Smith   ierr = MatStoreValues(aij->B);CHKERRQ(ierr);
797fc3c18eSBarry Smith   PetscFunctionReturn(0);
807fc3c18eSBarry Smith }
817fc3c18eSBarry Smith EXTERN_C_END
827fc3c18eSBarry Smith 
837fc3c18eSBarry Smith EXTERN_C_BEGIN
844a2ae208SSatish Balay #undef __FUNCT__
854a2ae208SSatish Balay #define __FUNCT__ "MatRetrieveValues_MPIBAIJ"
867fc3c18eSBarry Smith int MatRetrieveValues_MPIBAIJ(Mat mat)
877fc3c18eSBarry Smith {
887fc3c18eSBarry Smith   Mat_MPIBAIJ *aij = (Mat_MPIBAIJ *)mat->data;
897fc3c18eSBarry Smith   int         ierr;
907fc3c18eSBarry Smith 
917fc3c18eSBarry Smith   PetscFunctionBegin;
927fc3c18eSBarry Smith   ierr = MatRetrieveValues(aij->A);CHKERRQ(ierr);
937fc3c18eSBarry Smith   ierr = MatRetrieveValues(aij->B);CHKERRQ(ierr);
947fc3c18eSBarry Smith   PetscFunctionReturn(0);
957fc3c18eSBarry Smith }
967fc3c18eSBarry Smith EXTERN_C_END
977fc3c18eSBarry Smith 
98537820f0SBarry Smith /*
99537820f0SBarry Smith      Local utility routine that creates a mapping from the global column
10057b952d6SSatish Balay    number to the local number in the off-diagonal part of the local
10157b952d6SSatish Balay    storage of the matrix.  This is done in a non scable way since the
10257b952d6SSatish Balay    length of colmap equals the global matrix length.
10357b952d6SSatish Balay */
1044a2ae208SSatish Balay #undef __FUNCT__
1054a2ae208SSatish Balay #define __FUNCT__ "CreateColmap_MPIBAIJ_Private"
10657b952d6SSatish Balay static int CreateColmap_MPIBAIJ_Private(Mat mat)
10757b952d6SSatish Balay {
10857b952d6SSatish Balay   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;
10957b952d6SSatish Balay   Mat_SeqBAIJ *B = (Mat_SeqBAIJ*)baij->B->data;
110dc2900e9SSatish Balay   int         nbs = B->nbs,i,bs=B->bs,ierr;
11157b952d6SSatish Balay 
112d64ed03dSBarry Smith   PetscFunctionBegin;
113aa482453SBarry Smith #if defined (PETSC_USE_CTABLE)
114f14a1c24SBarry Smith   ierr = PetscTableCreate(baij->nbs,&baij->colmap);CHKERRQ(ierr);
11548e59246SSatish Balay   for (i=0; i<nbs; i++){
1160f5bd95cSBarry Smith     ierr = PetscTableAdd(baij->colmap,baij->garray[i]+1,i*bs+1);CHKERRQ(ierr);
11748e59246SSatish Balay   }
11848e59246SSatish Balay #else
11982502324SSatish Balay   ierr = PetscMalloc((baij->Nbs+1)*sizeof(int),&baij->colmap);CHKERRQ(ierr);
120b0a32e0cSBarry Smith   PetscLogObjectMemory(mat,baij->Nbs*sizeof(int));
121549d3d68SSatish Balay   ierr = PetscMemzero(baij->colmap,baij->Nbs*sizeof(int));CHKERRQ(ierr);
122928fc39bSSatish Balay   for (i=0; i<nbs; i++) baij->colmap[baij->garray[i]] = i*bs+1;
12348e59246SSatish Balay #endif
1243a40ed3dSBarry Smith   PetscFunctionReturn(0);
12557b952d6SSatish Balay }
12657b952d6SSatish Balay 
12780c1aa95SSatish Balay #define CHUNKSIZE  10
12880c1aa95SSatish Balay 
129f5e9677aSSatish Balay #define  MatSetValues_SeqBAIJ_A_Private(row,col,value,addv) \
13080c1aa95SSatish Balay { \
13180c1aa95SSatish Balay  \
13280c1aa95SSatish Balay     brow = row/bs;  \
13380c1aa95SSatish Balay     rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
134ac7a638eSSatish Balay     rmax = aimax[brow]; nrow = ailen[brow]; \
13580c1aa95SSatish Balay       bcol = col/bs; \
13680c1aa95SSatish Balay       ridx = row % bs; cidx = col % bs; \
137ab26458aSBarry Smith       low = 0; high = nrow; \
138ab26458aSBarry Smith       while (high-low > 3) { \
139ab26458aSBarry Smith         t = (low+high)/2; \
140ab26458aSBarry Smith         if (rp[t] > bcol) high = t; \
141ab26458aSBarry Smith         else              low  = t; \
142ab26458aSBarry Smith       } \
143ab26458aSBarry Smith       for (_i=low; _i<high; _i++) { \
14480c1aa95SSatish Balay         if (rp[_i] > bcol) break; \
14580c1aa95SSatish Balay         if (rp[_i] == bcol) { \
14680c1aa95SSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
147eada6651SSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
148eada6651SSatish Balay           else                    *bap  = value;  \
149ac7a638eSSatish Balay           goto a_noinsert; \
15080c1aa95SSatish Balay         } \
15180c1aa95SSatish Balay       } \
15289280ab3SLois Curfman McInnes       if (a->nonew == 1) goto a_noinsert; \
15329bbc08cSBarry Smith       else if (a->nonew == -1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero into matrix"); \
15480c1aa95SSatish Balay       if (nrow >= rmax) { \
15580c1aa95SSatish Balay         /* there is no extra room in row, therefore enlarge */ \
15680c1aa95SSatish Balay         int       new_nz = ai[a->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
1573eda8832SBarry Smith         MatScalar *new_a; \
15880c1aa95SSatish Balay  \
15929bbc08cSBarry Smith         if (a->nonew == -2) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero in the matrix"); \
16089280ab3SLois Curfman McInnes  \
16180c1aa95SSatish Balay         /* malloc new storage space */ \
1623eda8832SBarry Smith         len     = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(a->mbs+1)*sizeof(int); \
16382502324SSatish Balay         ierr = PetscMalloc(len,&new_a);CHKERRQ(ierr); \
16480c1aa95SSatish Balay         new_j   = (int*)(new_a + bs2*new_nz); \
16580c1aa95SSatish Balay         new_i   = new_j + new_nz; \
16680c1aa95SSatish Balay  \
16780c1aa95SSatish Balay         /* copy over old data into new slots */ \
16880c1aa95SSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = ai[ii];} \
16980c1aa95SSatish Balay         for (ii=brow+1; ii<a->mbs+1; ii++) {new_i[ii] = ai[ii]+CHUNKSIZE;} \
170549d3d68SSatish Balay         ierr = PetscMemcpy(new_j,aj,(ai[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
17180c1aa95SSatish Balay         len = (new_nz - CHUNKSIZE - ai[brow] - nrow); \
1723eda8832SBarry Smith         ierr = PetscMemcpy(new_j+ai[brow]+nrow+CHUNKSIZE,aj+ai[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
1733eda8832SBarry Smith         ierr = PetscMemcpy(new_a,aa,(ai[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
174549d3d68SSatish Balay         ierr = PetscMemzero(new_a+bs2*(ai[brow]+nrow),bs2*CHUNKSIZE*sizeof(Scalar));CHKERRQ(ierr); \
175549d3d68SSatish Balay         ierr = PetscMemcpy(new_a+bs2*(ai[brow]+nrow+CHUNKSIZE), \
1763eda8832SBarry Smith                     aa+bs2*(ai[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
17780c1aa95SSatish Balay         /* free up old matrix storage */ \
178606d414cSSatish Balay         ierr = PetscFree(a->a);CHKERRQ(ierr);  \
179606d414cSSatish Balay         if (!a->singlemalloc) { \
180606d414cSSatish Balay           ierr = PetscFree(a->i);CHKERRQ(ierr); \
181606d414cSSatish Balay           ierr = PetscFree(a->j);CHKERRQ(ierr);\
182606d414cSSatish Balay         } \
18380c1aa95SSatish Balay         aa = a->a = new_a; ai = a->i = new_i; aj = a->j = new_j;  \
1847c922b88SBarry Smith         a->singlemalloc = PETSC_TRUE; \
18580c1aa95SSatish Balay  \
18680c1aa95SSatish Balay         rp   = aj + ai[brow]; ap = aa + bs2*ai[brow]; \
187ac7a638eSSatish Balay         rmax = aimax[brow] = aimax[brow] + CHUNKSIZE; \
188b0a32e0cSBarry Smith         PetscLogObjectMemory(A,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
18980c1aa95SSatish Balay         a->maxnz += bs2*CHUNKSIZE; \
19080c1aa95SSatish Balay         a->reallocs++; \
19180c1aa95SSatish Balay         a->nz++; \
19280c1aa95SSatish Balay       } \
19380c1aa95SSatish Balay       N = nrow++ - 1;  \
19480c1aa95SSatish Balay       /* shift up all the later entries in this row */ \
19580c1aa95SSatish Balay       for (ii=N; ii>=_i; ii--) { \
19680c1aa95SSatish Balay         rp[ii+1] = rp[ii]; \
1973eda8832SBarry Smith         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
19880c1aa95SSatish Balay       } \
1993eda8832SBarry Smith       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr); }  \
20080c1aa95SSatish Balay       rp[_i]                      = bcol;  \
20180c1aa95SSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
202ac7a638eSSatish Balay       a_noinsert:; \
20380c1aa95SSatish Balay     ailen[brow] = nrow; \
20480c1aa95SSatish Balay }
20557b952d6SSatish Balay 
206ac7a638eSSatish Balay #define  MatSetValues_SeqBAIJ_B_Private(row,col,value,addv) \
207ac7a638eSSatish Balay { \
208ac7a638eSSatish Balay     brow = row/bs;  \
209ac7a638eSSatish Balay     rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
210ac7a638eSSatish Balay     rmax = bimax[brow]; nrow = bilen[brow]; \
211ac7a638eSSatish Balay       bcol = col/bs; \
212ac7a638eSSatish Balay       ridx = row % bs; cidx = col % bs; \
213ac7a638eSSatish Balay       low = 0; high = nrow; \
214ac7a638eSSatish Balay       while (high-low > 3) { \
215ac7a638eSSatish Balay         t = (low+high)/2; \
216ac7a638eSSatish Balay         if (rp[t] > bcol) high = t; \
217ac7a638eSSatish Balay         else              low  = t; \
218ac7a638eSSatish Balay       } \
219ac7a638eSSatish Balay       for (_i=low; _i<high; _i++) { \
220ac7a638eSSatish Balay         if (rp[_i] > bcol) break; \
221ac7a638eSSatish Balay         if (rp[_i] == bcol) { \
222ac7a638eSSatish Balay           bap  = ap +  bs2*_i + bs*cidx + ridx; \
223ac7a638eSSatish Balay           if (addv == ADD_VALUES) *bap += value;  \
224ac7a638eSSatish Balay           else                    *bap  = value;  \
225ac7a638eSSatish Balay           goto b_noinsert; \
226ac7a638eSSatish Balay         } \
227ac7a638eSSatish Balay       } \
22889280ab3SLois Curfman McInnes       if (b->nonew == 1) goto b_noinsert; \
22929bbc08cSBarry Smith       else if (b->nonew == -1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero into matrix"); \
230ac7a638eSSatish Balay       if (nrow >= rmax) { \
231ac7a638eSSatish Balay         /* there is no extra room in row, therefore enlarge */ \
23274c639caSSatish Balay         int       new_nz = bi[b->mbs] + CHUNKSIZE,len,*new_i,*new_j; \
2333eda8832SBarry Smith         MatScalar *new_a; \
234ac7a638eSSatish Balay  \
23529bbc08cSBarry Smith         if (b->nonew == -2) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Inserting a new nonzero in the matrix"); \
23689280ab3SLois Curfman McInnes  \
237ac7a638eSSatish Balay         /* malloc new storage space */ \
2383eda8832SBarry Smith         len     = new_nz*(sizeof(int)+bs2*sizeof(MatScalar))+(b->mbs+1)*sizeof(int); \
23982502324SSatish Balay         ierr    = PetscMalloc(len,&new_a);CHKERRQ(ierr); \
240ac7a638eSSatish Balay         new_j   = (int*)(new_a + bs2*new_nz); \
241ac7a638eSSatish Balay         new_i   = new_j + new_nz; \
242ac7a638eSSatish Balay  \
243ac7a638eSSatish Balay         /* copy over old data into new slots */ \
244ac7a638eSSatish Balay         for (ii=0; ii<brow+1; ii++) {new_i[ii] = bi[ii];} \
24574c639caSSatish Balay         for (ii=brow+1; ii<b->mbs+1; ii++) {new_i[ii] = bi[ii]+CHUNKSIZE;} \
246549d3d68SSatish Balay         ierr = PetscMemcpy(new_j,bj,(bi[brow]+nrow)*sizeof(int));CHKERRQ(ierr); \
247ac7a638eSSatish Balay         len  = (new_nz - CHUNKSIZE - bi[brow] - nrow); \
2483eda8832SBarry Smith         ierr = PetscMemcpy(new_j+bi[brow]+nrow+CHUNKSIZE,bj+bi[brow]+nrow,len*sizeof(int));CHKERRQ(ierr); \
2493eda8832SBarry Smith         ierr = PetscMemcpy(new_a,ba,(bi[brow]+nrow)*bs2*sizeof(MatScalar));CHKERRQ(ierr); \
2503eda8832SBarry Smith         ierr = PetscMemzero(new_a+bs2*(bi[brow]+nrow),bs2*CHUNKSIZE*sizeof(MatScalar));CHKERRQ(ierr); \
251549d3d68SSatish Balay         ierr = PetscMemcpy(new_a+bs2*(bi[brow]+nrow+CHUNKSIZE), \
2523eda8832SBarry Smith                     ba+bs2*(bi[brow]+nrow),bs2*len*sizeof(MatScalar));CHKERRQ(ierr);  \
253ac7a638eSSatish Balay         /* free up old matrix storage */ \
254606d414cSSatish Balay         ierr = PetscFree(b->a);CHKERRQ(ierr);  \
255606d414cSSatish Balay         if (!b->singlemalloc) { \
256606d414cSSatish Balay           ierr = PetscFree(b->i);CHKERRQ(ierr); \
257606d414cSSatish Balay           ierr = PetscFree(b->j);CHKERRQ(ierr); \
258606d414cSSatish Balay         } \
25974c639caSSatish Balay         ba = b->a = new_a; bi = b->i = new_i; bj = b->j = new_j;  \
2607c922b88SBarry Smith         b->singlemalloc = PETSC_TRUE; \
261ac7a638eSSatish Balay  \
262ac7a638eSSatish Balay         rp   = bj + bi[brow]; ap = ba + bs2*bi[brow]; \
263ac7a638eSSatish Balay         rmax = bimax[brow] = bimax[brow] + CHUNKSIZE; \
264b0a32e0cSBarry Smith         PetscLogObjectMemory(B,CHUNKSIZE*(sizeof(int) + bs2*sizeof(MatScalar))); \
26574c639caSSatish Balay         b->maxnz += bs2*CHUNKSIZE; \
26674c639caSSatish Balay         b->reallocs++; \
26774c639caSSatish Balay         b->nz++; \
268ac7a638eSSatish Balay       } \
269ac7a638eSSatish Balay       N = nrow++ - 1;  \
270ac7a638eSSatish Balay       /* shift up all the later entries in this row */ \
271ac7a638eSSatish Balay       for (ii=N; ii>=_i; ii--) { \
272ac7a638eSSatish Balay         rp[ii+1] = rp[ii]; \
2733eda8832SBarry Smith         ierr = PetscMemcpy(ap+bs2*(ii+1),ap+bs2*(ii),bs2*sizeof(MatScalar));CHKERRQ(ierr); \
274ac7a638eSSatish Balay       } \
2753eda8832SBarry Smith       if (N>=_i) { ierr = PetscMemzero(ap+bs2*_i,bs2*sizeof(MatScalar));CHKERRQ(ierr);}  \
276ac7a638eSSatish Balay       rp[_i]                      = bcol;  \
277ac7a638eSSatish Balay       ap[bs2*_i + bs*cidx + ridx] = value;  \
278ac7a638eSSatish Balay       b_noinsert:; \
279ac7a638eSSatish Balay     bilen[brow] = nrow; \
280ac7a638eSSatish Balay }
281ac7a638eSSatish Balay 
28293fea6afSBarry Smith #if defined(PETSC_USE_MAT_SINGLE)
2834a2ae208SSatish Balay #undef __FUNCT__
2844a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPIBAIJ"
285ec1ea8d8SLois Curfman McInnes int MatSetValues_MPIBAIJ(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
28657b952d6SSatish Balay {
2876fa18ffdSBarry Smith   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
28893fea6afSBarry Smith   int         ierr,i,N = m*n;
2896fa18ffdSBarry Smith   MatScalar   *vsingle;
29093fea6afSBarry Smith 
29193fea6afSBarry Smith   PetscFunctionBegin;
2926fa18ffdSBarry Smith   if (N > b->setvalueslen) {
2936fa18ffdSBarry Smith     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
29482502324SSatish Balay     ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
2956fa18ffdSBarry Smith     b->setvalueslen  = N;
2966fa18ffdSBarry Smith   }
2976fa18ffdSBarry Smith   vsingle = b->setvaluescopy;
2986fa18ffdSBarry Smith 
29993fea6afSBarry Smith   for (i=0; i<N; i++) {
30093fea6afSBarry Smith     vsingle[i] = v[i];
30193fea6afSBarry Smith   }
30293fea6afSBarry Smith   ierr = MatSetValues_MPIBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
30393fea6afSBarry Smith   PetscFunctionReturn(0);
30493fea6afSBarry Smith }
30593fea6afSBarry Smith 
3064a2ae208SSatish Balay #undef __FUNCT__
3074a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPIBAIJ"
30893fea6afSBarry Smith int MatSetValuesBlocked_MPIBAIJ(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
30993fea6afSBarry Smith {
3106fa18ffdSBarry Smith   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
3116fa18ffdSBarry Smith   int         ierr,i,N = m*n*b->bs2;
3126fa18ffdSBarry Smith   MatScalar   *vsingle;
31393fea6afSBarry Smith 
31493fea6afSBarry Smith   PetscFunctionBegin;
3156fa18ffdSBarry Smith   if (N > b->setvalueslen) {
3166fa18ffdSBarry Smith     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
31782502324SSatish Balay     ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
3186fa18ffdSBarry Smith     b->setvalueslen  = N;
3196fa18ffdSBarry Smith   }
3206fa18ffdSBarry Smith   vsingle = b->setvaluescopy;
32193fea6afSBarry Smith   for (i=0; i<N; i++) {
32293fea6afSBarry Smith     vsingle[i] = v[i];
32393fea6afSBarry Smith   }
32493fea6afSBarry Smith   ierr = MatSetValuesBlocked_MPIBAIJ_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
32593fea6afSBarry Smith   PetscFunctionReturn(0);
32693fea6afSBarry Smith }
3276fa18ffdSBarry Smith 
3284a2ae208SSatish Balay #undef __FUNCT__
3294a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPIBAIJ_HT"
3306fa18ffdSBarry Smith int MatSetValues_MPIBAIJ_HT(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
3316fa18ffdSBarry Smith {
3326fa18ffdSBarry Smith   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
3336fa18ffdSBarry Smith   int         ierr,i,N = m*n;
3346fa18ffdSBarry Smith   MatScalar   *vsingle;
3356fa18ffdSBarry Smith 
3366fa18ffdSBarry Smith   PetscFunctionBegin;
3376fa18ffdSBarry Smith   if (N > b->setvalueslen) {
3386fa18ffdSBarry Smith     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
33982502324SSatish Balay     ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
3406fa18ffdSBarry Smith     b->setvalueslen  = N;
3416fa18ffdSBarry Smith   }
3426fa18ffdSBarry Smith   vsingle = b->setvaluescopy;
3436fa18ffdSBarry Smith   for (i=0; i<N; i++) {
3446fa18ffdSBarry Smith     vsingle[i] = v[i];
3456fa18ffdSBarry Smith   }
3466fa18ffdSBarry Smith   ierr = MatSetValues_MPIBAIJ_HT_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
3476fa18ffdSBarry Smith   PetscFunctionReturn(0);
3486fa18ffdSBarry Smith }
3496fa18ffdSBarry Smith 
3504a2ae208SSatish Balay #undef __FUNCT__
3514a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPIBAIJ_HT"
3526fa18ffdSBarry Smith int MatSetValuesBlocked_MPIBAIJ_HT(Mat mat,int m,int *im,int n,int *in,Scalar *v,InsertMode addv)
3536fa18ffdSBarry Smith {
3546fa18ffdSBarry Smith   Mat_MPIBAIJ *b = (Mat_MPIBAIJ*)mat->data;
3556fa18ffdSBarry Smith   int         ierr,i,N = m*n*b->bs2;
3566fa18ffdSBarry Smith   MatScalar   *vsingle;
3576fa18ffdSBarry Smith 
3586fa18ffdSBarry Smith   PetscFunctionBegin;
3596fa18ffdSBarry Smith   if (N > b->setvalueslen) {
3606fa18ffdSBarry Smith     if (b->setvaluescopy) {ierr = PetscFree(b->setvaluescopy);CHKERRQ(ierr);}
36182502324SSatish Balay     ierr = PetscMalloc(N*sizeof(MatScalar),&b->setvaluescopy);CHKERRQ(ierr);
3626fa18ffdSBarry Smith     b->setvalueslen  = N;
3636fa18ffdSBarry Smith   }
3646fa18ffdSBarry Smith   vsingle = b->setvaluescopy;
3656fa18ffdSBarry Smith   for (i=0; i<N; i++) {
3666fa18ffdSBarry Smith     vsingle[i] = v[i];
3676fa18ffdSBarry Smith   }
3686fa18ffdSBarry Smith   ierr = MatSetValuesBlocked_MPIBAIJ_HT_MatScalar(mat,m,im,n,in,vsingle,addv);CHKERRQ(ierr);
3696fa18ffdSBarry Smith   PetscFunctionReturn(0);
3706fa18ffdSBarry Smith }
37193fea6afSBarry Smith #endif
37293fea6afSBarry Smith 
3734a2ae208SSatish Balay #undef __FUNCT__
3744a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPIBAIJ"
37593fea6afSBarry Smith int MatSetValues_MPIBAIJ_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
37693fea6afSBarry Smith {
37757b952d6SSatish Balay   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;
37893fea6afSBarry Smith   MatScalar   value;
379273d9f13SBarry Smith   PetscTruth  roworiented = baij->roworiented;
3804fa0d573SSatish Balay   int         ierr,i,j,row,col;
381273d9f13SBarry Smith   int         rstart_orig=baij->rstart_bs;
3824fa0d573SSatish Balay   int         rend_orig=baij->rend_bs,cstart_orig=baij->cstart_bs;
3834fa0d573SSatish Balay   int         cend_orig=baij->cend_bs,bs=baij->bs;
38457b952d6SSatish Balay 
385eada6651SSatish Balay   /* Some Variables required in the macro */
38680c1aa95SSatish Balay   Mat         A = baij->A;
38780c1aa95SSatish Balay   Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)(A)->data;
388ac7a638eSSatish Balay   int         *aimax=a->imax,*ai=a->i,*ailen=a->ilen,*aj=a->j;
3893eda8832SBarry Smith   MatScalar   *aa=a->a;
390ac7a638eSSatish Balay 
391ac7a638eSSatish Balay   Mat         B = baij->B;
392ac7a638eSSatish Balay   Mat_SeqBAIJ *b = (Mat_SeqBAIJ*)(B)->data;
393ac7a638eSSatish Balay   int         *bimax=b->imax,*bi=b->i,*bilen=b->ilen,*bj=b->j;
3943eda8832SBarry Smith   MatScalar   *ba=b->a;
395ac7a638eSSatish Balay 
396ac7a638eSSatish Balay   int         *rp,ii,nrow,_i,rmax,N,brow,bcol;
397ab26458aSBarry Smith   int         low,high,t,ridx,cidx,bs2=a->bs2;
3983eda8832SBarry Smith   MatScalar   *ap,*bap;
39980c1aa95SSatish Balay 
400d64ed03dSBarry Smith   PetscFunctionBegin;
40157b952d6SSatish Balay   for (i=0; i<m; i++) {
4025ef9f2a5SBarry Smith     if (im[i] < 0) continue;
403aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
404273d9f13SBarry Smith     if (im[i] >= mat->M) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
405639f9d9dSBarry Smith #endif
40657b952d6SSatish Balay     if (im[i] >= rstart_orig && im[i] < rend_orig) {
40757b952d6SSatish Balay       row = im[i] - rstart_orig;
40857b952d6SSatish Balay       for (j=0; j<n; j++) {
40957b952d6SSatish Balay         if (in[j] >= cstart_orig && in[j] < cend_orig){
41057b952d6SSatish Balay           col = in[j] - cstart_orig;
41157b952d6SSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
412f5e9677aSSatish Balay           MatSetValues_SeqBAIJ_A_Private(row,col,value,addv);
41380c1aa95SSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->A,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
41473959e64SBarry Smith         } else if (in[j] < 0) continue;
415aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
416273d9f13SBarry Smith         else if (in[j] >= mat->N) {SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Column too large");}
417639f9d9dSBarry Smith #endif
41857b952d6SSatish Balay         else {
41957b952d6SSatish Balay           if (mat->was_assembled) {
420905e6a2fSBarry Smith             if (!baij->colmap) {
421905e6a2fSBarry Smith               ierr = CreateColmap_MPIBAIJ_Private(mat);CHKERRQ(ierr);
422905e6a2fSBarry Smith             }
423aa482453SBarry Smith #if defined (PETSC_USE_CTABLE)
4240f5bd95cSBarry Smith             ierr = PetscTableFind(baij->colmap,in[j]/bs + 1,&col);CHKERRQ(ierr);
425fa46199cSSatish Balay             col  = col - 1 + in[j]%bs;
42648e59246SSatish Balay #else
427905e6a2fSBarry Smith             col = baij->colmap[in[j]/bs] - 1 + in[j]%bs;
42848e59246SSatish Balay #endif
42957b952d6SSatish Balay             if (col < 0 && !((Mat_SeqBAIJ*)(baij->A->data))->nonew) {
43057b952d6SSatish Balay               ierr = DisAssemble_MPIBAIJ(mat);CHKERRQ(ierr);
43157b952d6SSatish Balay               col =  in[j];
4329bf004c3SSatish Balay               /* Reinitialize the variables required by MatSetValues_SeqBAIJ_B_Private() */
4339bf004c3SSatish Balay               B = baij->B;
4349bf004c3SSatish Balay               b = (Mat_SeqBAIJ*)(B)->data;
4359bf004c3SSatish Balay               bimax=b->imax;bi=b->i;bilen=b->ilen;bj=b->j;
4369bf004c3SSatish Balay               ba=b->a;
43757b952d6SSatish Balay             }
438d64ed03dSBarry Smith           } else col = in[j];
43957b952d6SSatish Balay           if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
440ac7a638eSSatish Balay           MatSetValues_SeqBAIJ_B_Private(row,col,value,addv);
441ac7a638eSSatish Balay           /* ierr = MatSetValues_SeqBAIJ(baij->B,1,&row,1,&col,&value,addv);CHKERRQ(ierr); */
44257b952d6SSatish Balay         }
44357b952d6SSatish Balay       }
444d64ed03dSBarry Smith     } else {
44590f02eecSBarry Smith       if (!baij->donotstash) {
446ff2fd236SBarry Smith         if (roworiented) {
4476fa18ffdSBarry Smith           ierr = MatStashValuesRow_Private(&mat->stash,im[i],n,in,v+i*n);CHKERRQ(ierr);
448ff2fd236SBarry Smith         } else {
4496fa18ffdSBarry Smith           ierr = MatStashValuesCol_Private(&mat->stash,im[i],n,in,v+i,m);CHKERRQ(ierr);
45057b952d6SSatish Balay         }
45157b952d6SSatish Balay       }
45257b952d6SSatish Balay     }
45390f02eecSBarry Smith   }
4543a40ed3dSBarry Smith   PetscFunctionReturn(0);
45557b952d6SSatish Balay }
45657b952d6SSatish Balay 
4574a2ae208SSatish Balay #undef __FUNCT__
4584a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPIBAIJ_MatScalar"
45993fea6afSBarry Smith int MatSetValuesBlocked_MPIBAIJ_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
460ab26458aSBarry Smith {
461ab26458aSBarry Smith   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;
46293fea6afSBarry Smith   MatScalar   *value,*barray=baij->barray;
463273d9f13SBarry Smith   PetscTruth  roworiented = baij->roworiented;
464273d9f13SBarry Smith   int         ierr,i,j,ii,jj,row,col,rstart=baij->rstart;
465ab26458aSBarry Smith   int         rend=baij->rend,cstart=baij->cstart,stepval;
466ab26458aSBarry Smith   int         cend=baij->cend,bs=baij->bs,bs2=baij->bs2;
467ab26458aSBarry Smith 
468b16ae2b1SBarry Smith   PetscFunctionBegin;
46930793edcSSatish Balay   if(!barray) {
47082502324SSatish Balay     ierr         = PetscMalloc(bs2*sizeof(MatScalar),&barray);CHKERRQ(ierr);
47182502324SSatish Balay     baij->barray = barray;
47230793edcSSatish Balay   }
47330793edcSSatish Balay 
474ab26458aSBarry Smith   if (roworiented) {
475ab26458aSBarry Smith     stepval = (n-1)*bs;
476ab26458aSBarry Smith   } else {
477ab26458aSBarry Smith     stepval = (m-1)*bs;
478ab26458aSBarry Smith   }
479ab26458aSBarry Smith   for (i=0; i<m; i++) {
4805ef9f2a5SBarry Smith     if (im[i] < 0) continue;
481aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
48229bbc08cSBarry Smith     if (im[i] >= baij->Mbs) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Row too large, row %d max %d",im[i],baij->Mbs);
483ab26458aSBarry Smith #endif
484ab26458aSBarry Smith     if (im[i] >= rstart && im[i] < rend) {
485ab26458aSBarry Smith       row = im[i] - rstart;
486ab26458aSBarry Smith       for (j=0; j<n; j++) {
48715b57d14SSatish Balay         /* If NumCol = 1 then a copy is not required */
48815b57d14SSatish Balay         if ((roworiented) && (n == 1)) {
48915b57d14SSatish Balay           barray = v + i*bs2;
49015b57d14SSatish Balay         } else if((!roworiented) && (m == 1)) {
49115b57d14SSatish Balay           barray = v + j*bs2;
49215b57d14SSatish Balay         } else { /* Here a copy is required */
493ab26458aSBarry Smith           if (roworiented) {
494ab26458aSBarry Smith             value = v + i*(stepval+bs)*bs + j*bs;
495ab26458aSBarry Smith           } else {
496ab26458aSBarry Smith             value = v + j*(stepval+bs)*bs + i*bs;
497abef11f7SSatish Balay           }
49847513183SBarry Smith           for (ii=0; ii<bs; ii++,value+=stepval) {
49947513183SBarry Smith             for (jj=0; jj<bs; jj++) {
50030793edcSSatish Balay               *barray++  = *value++;
50147513183SBarry Smith             }
50247513183SBarry Smith           }
50330793edcSSatish Balay           barray -=bs2;
50415b57d14SSatish Balay         }
505abef11f7SSatish Balay 
506abef11f7SSatish Balay         if (in[j] >= cstart && in[j] < cend){
507abef11f7SSatish Balay           col  = in[j] - cstart;
50893fea6afSBarry Smith           ierr = MatSetValuesBlocked_SeqBAIJ_MatScalar(baij->A,1,&row,1,&col,barray,addv);CHKERRQ(ierr);
509ab26458aSBarry Smith         }
5105ef9f2a5SBarry Smith         else if (in[j] < 0) continue;
511aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
51229bbc08cSBarry Smith         else if (in[j] >= baij->Nbs) {SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"Column too large, col %d max %d",in[j],baij->Nbs);}
513ab26458aSBarry Smith #endif
514ab26458aSBarry Smith         else {
515ab26458aSBarry Smith           if (mat->was_assembled) {
516ab26458aSBarry Smith             if (!baij->colmap) {
517ab26458aSBarry Smith               ierr = CreateColmap_MPIBAIJ_Private(mat);CHKERRQ(ierr);
518ab26458aSBarry Smith             }
519a5eb4965SSatish Balay 
520aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
521aa482453SBarry Smith #if defined (PETSC_USE_CTABLE)
522fa46199cSSatish Balay             { int data;
5230f5bd95cSBarry Smith               ierr = PetscTableFind(baij->colmap,in[j]+1,&data);CHKERRQ(ierr);
52429bbc08cSBarry Smith               if ((data - 1) % bs) SETERRQ(PETSC_ERR_PLIB,"Incorrect colmap");
525fa46199cSSatish Balay             }
52648e59246SSatish Balay #else
52729bbc08cSBarry Smith             if ((baij->colmap[in[j]] - 1) % bs) SETERRQ(PETSC_ERR_PLIB,"Incorrect colmap");
528a5eb4965SSatish Balay #endif
52948e59246SSatish Balay #endif
530aa482453SBarry Smith #if defined (PETSC_USE_CTABLE)
5310f5bd95cSBarry Smith 	    ierr = PetscTableFind(baij->colmap,in[j]+1,&col);CHKERRQ(ierr);
532fa46199cSSatish Balay             col  = (col - 1)/bs;
53348e59246SSatish Balay #else
534a5eb4965SSatish Balay             col = (baij->colmap[in[j]] - 1)/bs;
53548e59246SSatish Balay #endif
536ab26458aSBarry Smith             if (col < 0 && !((Mat_SeqBAIJ*)(baij->A->data))->nonew) {
537ab26458aSBarry Smith               ierr = DisAssemble_MPIBAIJ(mat);CHKERRQ(ierr);
538ab26458aSBarry Smith               col =  in[j];
539ab26458aSBarry Smith             }
540ab26458aSBarry Smith           }
541ab26458aSBarry Smith           else col = in[j];
54293fea6afSBarry Smith           ierr = MatSetValuesBlocked_SeqBAIJ_MatScalar(baij->B,1,&row,1,&col,barray,addv);CHKERRQ(ierr);
543ab26458aSBarry Smith         }
544ab26458aSBarry Smith       }
545d64ed03dSBarry Smith     } else {
546ab26458aSBarry Smith       if (!baij->donotstash) {
547ff2fd236SBarry Smith         if (roworiented) {
5486fa18ffdSBarry Smith           ierr = MatStashValuesRowBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr);
549ff2fd236SBarry Smith         } else {
5506fa18ffdSBarry Smith           ierr = MatStashValuesColBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr);
551ff2fd236SBarry Smith         }
552abef11f7SSatish Balay       }
553ab26458aSBarry Smith     }
554ab26458aSBarry Smith   }
5553a40ed3dSBarry Smith   PetscFunctionReturn(0);
556ab26458aSBarry Smith }
5576fa18ffdSBarry Smith 
5580bdbc534SSatish Balay #define HASH_KEY 0.6180339887
559c2760754SSatish Balay #define HASH(size,key,tmp) (tmp = (key)*HASH_KEY,(int)((size)*(tmp-(int)tmp)))
5606fa18ffdSBarry Smith /* #define HASH(size,key) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
561c2760754SSatish Balay /* #define HASH(size,key,tmp) ((int)((size)*fmod(((key)*HASH_KEY),1))) */
5624a2ae208SSatish Balay #undef __FUNCT__
5634a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPIBAIJ_HT_MatScalar"
5646fa18ffdSBarry Smith int MatSetValues_MPIBAIJ_HT_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
5650bdbc534SSatish Balay {
5660bdbc534SSatish Balay   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;
567273d9f13SBarry Smith   PetscTruth  roworiented = baij->roworiented;
5680bdbc534SSatish Balay   int         ierr,i,j,row,col;
569273d9f13SBarry Smith   int         rstart_orig=baij->rstart_bs;
570c2760754SSatish Balay   int         rend_orig=baij->rend_bs,Nbs=baij->Nbs;
571c2760754SSatish Balay   int         h1,key,size=baij->ht_size,bs=baij->bs,*HT=baij->ht,idx;
572329f5518SBarry Smith   PetscReal   tmp;
5733eda8832SBarry Smith   MatScalar   **HD = baij->hd,value;
574aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
5754a15367fSSatish Balay   int         total_ct=baij->ht_total_ct,insert_ct=baij->ht_insert_ct;
5764a15367fSSatish Balay #endif
5770bdbc534SSatish Balay 
5780bdbc534SSatish Balay   PetscFunctionBegin;
5790bdbc534SSatish Balay 
5800bdbc534SSatish Balay   for (i=0; i<m; i++) {
581aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
58229bbc08cSBarry Smith     if (im[i] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative row");
583273d9f13SBarry Smith     if (im[i] >= mat->M) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
5840bdbc534SSatish Balay #endif
5850bdbc534SSatish Balay       row = im[i];
586c2760754SSatish Balay     if (row >= rstart_orig && row < rend_orig) {
5870bdbc534SSatish Balay       for (j=0; j<n; j++) {
5880bdbc534SSatish Balay         col = in[j];
5896fa18ffdSBarry Smith         if (roworiented) value = v[i*n+j]; else value = v[i+j*m];
5900bdbc534SSatish Balay         /* Look up into the Hash Table */
591c2760754SSatish Balay         key = (row/bs)*Nbs+(col/bs)+1;
592c2760754SSatish Balay         h1  = HASH(size,key,tmp);
5930bdbc534SSatish Balay 
594c2760754SSatish Balay 
595c2760754SSatish Balay         idx = h1;
596aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
597187ce0cbSSatish Balay         insert_ct++;
598187ce0cbSSatish Balay         total_ct++;
599187ce0cbSSatish Balay         if (HT[idx] != key) {
600187ce0cbSSatish Balay           for (idx=h1; (idx<size) && (HT[idx]!=key); idx++,total_ct++);
601187ce0cbSSatish Balay           if (idx == size) {
602187ce0cbSSatish Balay             for (idx=0; (idx<h1) && (HT[idx]!=key); idx++,total_ct++);
603187ce0cbSSatish Balay             if (idx == h1) {
60429bbc08cSBarry Smith               SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"(row,col) has no entry in the hash table");
605187ce0cbSSatish Balay             }
606187ce0cbSSatish Balay           }
607187ce0cbSSatish Balay         }
608187ce0cbSSatish Balay #else
609c2760754SSatish Balay         if (HT[idx] != key) {
610c2760754SSatish Balay           for (idx=h1; (idx<size) && (HT[idx]!=key); idx++);
611c2760754SSatish Balay           if (idx == size) {
612c2760754SSatish Balay             for (idx=0; (idx<h1) && (HT[idx]!=key); idx++);
613c2760754SSatish Balay             if (idx == h1) {
61429bbc08cSBarry Smith               SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"(row,col) has no entry in the hash table");
615c2760754SSatish Balay             }
616c2760754SSatish Balay           }
617c2760754SSatish Balay         }
618187ce0cbSSatish Balay #endif
619c2760754SSatish Balay         /* A HASH table entry is found, so insert the values at the correct address */
620c2760754SSatish Balay         if (addv == ADD_VALUES) *(HD[idx]+ (col % bs)*bs + (row % bs)) += value;
621c2760754SSatish Balay         else                    *(HD[idx]+ (col % bs)*bs + (row % bs))  = value;
6220bdbc534SSatish Balay       }
6230bdbc534SSatish Balay     } else {
6240bdbc534SSatish Balay       if (!baij->donotstash) {
625ff2fd236SBarry Smith         if (roworiented) {
6268798bf22SSatish Balay           ierr = MatStashValuesRow_Private(&mat->stash,im[i],n,in,v+i*n);CHKERRQ(ierr);
627ff2fd236SBarry Smith         } else {
6288798bf22SSatish Balay           ierr = MatStashValuesCol_Private(&mat->stash,im[i],n,in,v+i,m);CHKERRQ(ierr);
6290bdbc534SSatish Balay         }
6300bdbc534SSatish Balay       }
6310bdbc534SSatish Balay     }
6320bdbc534SSatish Balay   }
633aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
634187ce0cbSSatish Balay   baij->ht_total_ct = total_ct;
635187ce0cbSSatish Balay   baij->ht_insert_ct = insert_ct;
636187ce0cbSSatish Balay #endif
6370bdbc534SSatish Balay   PetscFunctionReturn(0);
6380bdbc534SSatish Balay }
6390bdbc534SSatish Balay 
6404a2ae208SSatish Balay #undef __FUNCT__
6414a2ae208SSatish Balay #define __FUNCT__ "MatSetValuesBlocked_MPIBAIJ_HT_MatScalar"
6426fa18ffdSBarry Smith int MatSetValuesBlocked_MPIBAIJ_HT_MatScalar(Mat mat,int m,int *im,int n,int *in,MatScalar *v,InsertMode addv)
6430bdbc534SSatish Balay {
6440bdbc534SSatish Balay   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;
645273d9f13SBarry Smith   PetscTruth  roworiented = baij->roworiented;
6468798bf22SSatish Balay   int         ierr,i,j,ii,jj,row,col;
647273d9f13SBarry Smith   int         rstart=baij->rstart ;
648b4cc0f5aSSatish Balay   int         rend=baij->rend,stepval,bs=baij->bs,bs2=baij->bs2;
649c2760754SSatish Balay   int         h1,key,size=baij->ht_size,idx,*HT=baij->ht,Nbs=baij->Nbs;
650329f5518SBarry Smith   PetscReal   tmp;
6513eda8832SBarry Smith   MatScalar   **HD = baij->hd,*baij_a;
6526fa18ffdSBarry Smith   MatScalar   *v_t,*value;
653aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
6544a15367fSSatish Balay   int         total_ct=baij->ht_total_ct,insert_ct=baij->ht_insert_ct;
6554a15367fSSatish Balay #endif
6560bdbc534SSatish Balay 
657d0a41580SSatish Balay   PetscFunctionBegin;
658d0a41580SSatish Balay 
6590bdbc534SSatish Balay   if (roworiented) {
6600bdbc534SSatish Balay     stepval = (n-1)*bs;
6610bdbc534SSatish Balay   } else {
6620bdbc534SSatish Balay     stepval = (m-1)*bs;
6630bdbc534SSatish Balay   }
6640bdbc534SSatish Balay   for (i=0; i<m; i++) {
665aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
66629bbc08cSBarry Smith     if (im[i] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative row");
66729bbc08cSBarry Smith     if (im[i] >= baij->Mbs) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
6680bdbc534SSatish Balay #endif
6690bdbc534SSatish Balay     row   = im[i];
670187ce0cbSSatish Balay     v_t   = v + i*bs2;
671c2760754SSatish Balay     if (row >= rstart && row < rend) {
6720bdbc534SSatish Balay       for (j=0; j<n; j++) {
6730bdbc534SSatish Balay         col = in[j];
6740bdbc534SSatish Balay 
6750bdbc534SSatish Balay         /* Look up into the Hash Table */
676c2760754SSatish Balay         key = row*Nbs+col+1;
677c2760754SSatish Balay         h1  = HASH(size,key,tmp);
6780bdbc534SSatish Balay 
679c2760754SSatish Balay         idx = h1;
680aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
681187ce0cbSSatish Balay         total_ct++;
682187ce0cbSSatish Balay         insert_ct++;
683187ce0cbSSatish Balay        if (HT[idx] != key) {
684187ce0cbSSatish Balay           for (idx=h1; (idx<size) && (HT[idx]!=key); idx++,total_ct++);
685187ce0cbSSatish Balay           if (idx == size) {
686187ce0cbSSatish Balay             for (idx=0; (idx<h1) && (HT[idx]!=key); idx++,total_ct++);
687187ce0cbSSatish Balay             if (idx == h1) {
68829bbc08cSBarry Smith               SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"(row,col) has no entry in the hash table");
689187ce0cbSSatish Balay             }
690187ce0cbSSatish Balay           }
691187ce0cbSSatish Balay         }
692187ce0cbSSatish Balay #else
693c2760754SSatish Balay         if (HT[idx] != key) {
694c2760754SSatish Balay           for (idx=h1; (idx<size) && (HT[idx]!=key); idx++);
695c2760754SSatish Balay           if (idx == size) {
696c2760754SSatish Balay             for (idx=0; (idx<h1) && (HT[idx]!=key); idx++);
697c2760754SSatish Balay             if (idx == h1) {
69829bbc08cSBarry Smith               SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"(row,col) has no entry in the hash table");
699c2760754SSatish Balay             }
700c2760754SSatish Balay           }
701c2760754SSatish Balay         }
702187ce0cbSSatish Balay #endif
703c2760754SSatish Balay         baij_a = HD[idx];
7040bdbc534SSatish Balay         if (roworiented) {
705c2760754SSatish Balay           /*value = v + i*(stepval+bs)*bs + j*bs;*/
706187ce0cbSSatish Balay           /* value = v + (i*(stepval+bs)+j)*bs; */
707187ce0cbSSatish Balay           value = v_t;
708187ce0cbSSatish Balay           v_t  += bs;
709fef45726SSatish Balay           if (addv == ADD_VALUES) {
710c2760754SSatish Balay             for (ii=0; ii<bs; ii++,value+=stepval) {
711c2760754SSatish Balay               for (jj=ii; jj<bs2; jj+=bs) {
712fef45726SSatish Balay                 baij_a[jj]  += *value++;
713b4cc0f5aSSatish Balay               }
714b4cc0f5aSSatish Balay             }
715fef45726SSatish Balay           } else {
716c2760754SSatish Balay             for (ii=0; ii<bs; ii++,value+=stepval) {
717c2760754SSatish Balay               for (jj=ii; jj<bs2; jj+=bs) {
718fef45726SSatish Balay                 baij_a[jj]  = *value++;
719fef45726SSatish Balay               }
720fef45726SSatish Balay             }
721fef45726SSatish Balay           }
7220bdbc534SSatish Balay         } else {
7230bdbc534SSatish Balay           value = v + j*(stepval+bs)*bs + i*bs;
724fef45726SSatish Balay           if (addv == ADD_VALUES) {
725b4cc0f5aSSatish Balay             for (ii=0; ii<bs; ii++,value+=stepval,baij_a+=bs) {
7260bdbc534SSatish Balay               for (jj=0; jj<bs; jj++) {
727fef45726SSatish Balay                 baij_a[jj]  += *value++;
728fef45726SSatish Balay               }
729fef45726SSatish Balay             }
730fef45726SSatish Balay           } else {
731fef45726SSatish Balay             for (ii=0; ii<bs; ii++,value+=stepval,baij_a+=bs) {
732fef45726SSatish Balay               for (jj=0; jj<bs; jj++) {
733fef45726SSatish Balay                 baij_a[jj]  = *value++;
734fef45726SSatish Balay               }
735b4cc0f5aSSatish Balay             }
7360bdbc534SSatish Balay           }
7370bdbc534SSatish Balay         }
7380bdbc534SSatish Balay       }
7390bdbc534SSatish Balay     } else {
7400bdbc534SSatish Balay       if (!baij->donotstash) {
7410bdbc534SSatish Balay         if (roworiented) {
7428798bf22SSatish Balay           ierr = MatStashValuesRowBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr);
7430bdbc534SSatish Balay         } else {
7448798bf22SSatish Balay           ierr = MatStashValuesColBlocked_Private(&mat->bstash,im[i],n,in,v,m,n,i);CHKERRQ(ierr);
7450bdbc534SSatish Balay         }
7460bdbc534SSatish Balay       }
7470bdbc534SSatish Balay     }
7480bdbc534SSatish Balay   }
749aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
750187ce0cbSSatish Balay   baij->ht_total_ct = total_ct;
751187ce0cbSSatish Balay   baij->ht_insert_ct = insert_ct;
752187ce0cbSSatish Balay #endif
7530bdbc534SSatish Balay   PetscFunctionReturn(0);
7540bdbc534SSatish Balay }
755133cdb44SSatish Balay 
7564a2ae208SSatish Balay #undef __FUNCT__
7574a2ae208SSatish Balay #define __FUNCT__ "MatGetValues_MPIBAIJ"
758ec1ea8d8SLois Curfman McInnes int MatGetValues_MPIBAIJ(Mat mat,int m,int *idxm,int n,int *idxn,Scalar *v)
759d6de1c52SSatish Balay {
760d6de1c52SSatish Balay   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;
761d6de1c52SSatish Balay   int        bs=baij->bs,ierr,i,j,bsrstart = baij->rstart*bs,bsrend = baij->rend*bs;
76248e59246SSatish Balay   int        bscstart = baij->cstart*bs,bscend = baij->cend*bs,row,col,data;
763d6de1c52SSatish Balay 
764133cdb44SSatish Balay   PetscFunctionBegin;
765d6de1c52SSatish Balay   for (i=0; i<m; i++) {
76629bbc08cSBarry Smith     if (idxm[i] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative row");
767273d9f13SBarry Smith     if (idxm[i] >= mat->M) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
768d6de1c52SSatish Balay     if (idxm[i] >= bsrstart && idxm[i] < bsrend) {
769d6de1c52SSatish Balay       row = idxm[i] - bsrstart;
770d6de1c52SSatish Balay       for (j=0; j<n; j++) {
77129bbc08cSBarry Smith         if (idxn[j] < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative column");
772273d9f13SBarry Smith         if (idxn[j] >= mat->N) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
773d6de1c52SSatish Balay         if (idxn[j] >= bscstart && idxn[j] < bscend){
774d6de1c52SSatish Balay           col = idxn[j] - bscstart;
77598dd23e9SBarry Smith           ierr = MatGetValues_SeqBAIJ(baij->A,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
776d64ed03dSBarry Smith         } else {
777905e6a2fSBarry Smith           if (!baij->colmap) {
778905e6a2fSBarry Smith             ierr = CreateColmap_MPIBAIJ_Private(mat);CHKERRQ(ierr);
779905e6a2fSBarry Smith           }
780aa482453SBarry Smith #if defined (PETSC_USE_CTABLE)
7810f5bd95cSBarry Smith           ierr = PetscTableFind(baij->colmap,idxn[j]/bs+1,&data);CHKERRQ(ierr);
782fa46199cSSatish Balay           data --;
78348e59246SSatish Balay #else
78448e59246SSatish Balay           data = baij->colmap[idxn[j]/bs]-1;
78548e59246SSatish Balay #endif
78648e59246SSatish Balay           if((data < 0) || (baij->garray[data/bs] != idxn[j]/bs)) *(v+i*n+j) = 0.0;
787d9d09a02SSatish Balay           else {
78848e59246SSatish Balay             col  = data + idxn[j]%bs;
78998dd23e9SBarry Smith             ierr = MatGetValues_SeqBAIJ(baij->B,1,&row,1,&col,v+i*n+j);CHKERRQ(ierr);
790d6de1c52SSatish Balay           }
791d6de1c52SSatish Balay         }
792d6de1c52SSatish Balay       }
793d64ed03dSBarry Smith     } else {
79429bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"Only local values currently supported");
795d6de1c52SSatish Balay     }
796d6de1c52SSatish Balay   }
7973a40ed3dSBarry Smith  PetscFunctionReturn(0);
798d6de1c52SSatish Balay }
799d6de1c52SSatish Balay 
8004a2ae208SSatish Balay #undef __FUNCT__
8014a2ae208SSatish Balay #define __FUNCT__ "MatNorm_MPIBAIJ"
802329f5518SBarry Smith int MatNorm_MPIBAIJ(Mat mat,NormType type,PetscReal *norm)
803d6de1c52SSatish Balay {
804d6de1c52SSatish Balay   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;
805d6de1c52SSatish Balay   Mat_SeqBAIJ *amat = (Mat_SeqBAIJ*)baij->A->data,*bmat = (Mat_SeqBAIJ*)baij->B->data;
806acdf5bf4SSatish Balay   int        ierr,i,bs2=baij->bs2;
807329f5518SBarry Smith   PetscReal  sum = 0.0;
8083eda8832SBarry Smith   MatScalar  *v;
809d6de1c52SSatish Balay 
810d64ed03dSBarry Smith   PetscFunctionBegin;
811d6de1c52SSatish Balay   if (baij->size == 1) {
812d6de1c52SSatish Balay     ierr =  MatNorm(baij->A,type,norm);CHKERRQ(ierr);
813d6de1c52SSatish Balay   } else {
814d6de1c52SSatish Balay     if (type == NORM_FROBENIUS) {
815d6de1c52SSatish Balay       v = amat->a;
816d6de1c52SSatish Balay       for (i=0; i<amat->nz*bs2; i++) {
817aa482453SBarry Smith #if defined(PETSC_USE_COMPLEX)
818329f5518SBarry Smith         sum += PetscRealPart(PetscConj(*v)*(*v)); v++;
819d6de1c52SSatish Balay #else
820d6de1c52SSatish Balay         sum += (*v)*(*v); v++;
821d6de1c52SSatish Balay #endif
822d6de1c52SSatish Balay       }
823d6de1c52SSatish Balay       v = bmat->a;
824d6de1c52SSatish Balay       for (i=0; i<bmat->nz*bs2; i++) {
825aa482453SBarry Smith #if defined(PETSC_USE_COMPLEX)
826329f5518SBarry Smith         sum += PetscRealPart(PetscConj(*v)*(*v)); v++;
827d6de1c52SSatish Balay #else
828d6de1c52SSatish Balay         sum += (*v)*(*v); v++;
829d6de1c52SSatish Balay #endif
830d6de1c52SSatish Balay       }
831ca161407SBarry Smith       ierr = MPI_Allreduce(&sum,norm,1,MPI_DOUBLE,MPI_SUM,mat->comm);CHKERRQ(ierr);
832d6de1c52SSatish Balay       *norm = sqrt(*norm);
833d64ed03dSBarry Smith     } else {
83429bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"No support for this norm yet");
835d6de1c52SSatish Balay     }
836d64ed03dSBarry Smith   }
8373a40ed3dSBarry Smith   PetscFunctionReturn(0);
838d6de1c52SSatish Balay }
83957b952d6SSatish Balay 
840bd7f49f5SSatish Balay 
841fef45726SSatish Balay /*
842fef45726SSatish Balay   Creates the hash table, and sets the table
843fef45726SSatish Balay   This table is created only once.
844fef45726SSatish Balay   If new entried need to be added to the matrix
845fef45726SSatish Balay   then the hash table has to be destroyed and
846fef45726SSatish Balay   recreated.
847fef45726SSatish Balay */
8484a2ae208SSatish Balay #undef __FUNCT__
8494a2ae208SSatish Balay #define __FUNCT__ "MatCreateHashTable_MPIBAIJ_Private"
850329f5518SBarry Smith int MatCreateHashTable_MPIBAIJ_Private(Mat mat,PetscReal factor)
851596b8d2eSBarry Smith {
852596b8d2eSBarry Smith   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;
853596b8d2eSBarry Smith   Mat         A = baij->A,B=baij->B;
854596b8d2eSBarry Smith   Mat_SeqBAIJ *a=(Mat_SeqBAIJ *)A->data,*b=(Mat_SeqBAIJ *)B->data;
8550bdbc534SSatish Balay   int         i,j,k,nz=a->nz+b->nz,h1,*ai=a->i,*aj=a->j,*bi=b->i,*bj=b->j;
856549d3d68SSatish Balay   int         size,bs2=baij->bs2,rstart=baij->rstart,ierr;
857187ce0cbSSatish Balay   int         cstart=baij->cstart,*garray=baij->garray,row,col,Nbs=baij->Nbs;
858fef45726SSatish Balay   int         *HT,key;
8593eda8832SBarry Smith   MatScalar   **HD;
860329f5518SBarry Smith   PetscReal   tmp;
861aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
8624a15367fSSatish Balay   int         ct=0,max=0;
8634a15367fSSatish Balay #endif
864fef45726SSatish Balay 
865d64ed03dSBarry Smith   PetscFunctionBegin;
8660bdbc534SSatish Balay   baij->ht_size=(int)(factor*nz);
8670bdbc534SSatish Balay   size = baij->ht_size;
868fef45726SSatish Balay 
8690bdbc534SSatish Balay   if (baij->ht) {
8700bdbc534SSatish Balay     PetscFunctionReturn(0);
871596b8d2eSBarry Smith   }
8720bdbc534SSatish Balay 
873fef45726SSatish Balay   /* Allocate Memory for Hash Table */
874b0a32e0cSBarry Smith   ierr     = PetscMalloc((size)*(sizeof(int)+sizeof(MatScalar*))+1,&baij->hd);CHKERRQ(ierr);
875b9e4cc15SSatish Balay   baij->ht = (int*)(baij->hd + size);
876b9e4cc15SSatish Balay   HD       = baij->hd;
877a07cd24cSSatish Balay   HT       = baij->ht;
878b9e4cc15SSatish Balay 
879b9e4cc15SSatish Balay 
880549d3d68SSatish Balay   ierr = PetscMemzero(HD,size*(sizeof(int)+sizeof(Scalar*)));CHKERRQ(ierr);
8810bdbc534SSatish Balay 
882596b8d2eSBarry Smith 
883596b8d2eSBarry Smith   /* Loop Over A */
8840bdbc534SSatish Balay   for (i=0; i<a->mbs; i++) {
885596b8d2eSBarry Smith     for (j=ai[i]; j<ai[i+1]; j++) {
8860bdbc534SSatish Balay       row = i+rstart;
8870bdbc534SSatish Balay       col = aj[j]+cstart;
888596b8d2eSBarry Smith 
889187ce0cbSSatish Balay       key = row*Nbs + col + 1;
890c2760754SSatish Balay       h1  = HASH(size,key,tmp);
8910bdbc534SSatish Balay       for (k=0; k<size; k++){
8920bdbc534SSatish Balay         if (HT[(h1+k)%size] == 0.0) {
8930bdbc534SSatish Balay           HT[(h1+k)%size] = key;
8940bdbc534SSatish Balay           HD[(h1+k)%size] = a->a + j*bs2;
895596b8d2eSBarry Smith           break;
896aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
897187ce0cbSSatish Balay         } else {
898187ce0cbSSatish Balay           ct++;
899187ce0cbSSatish Balay #endif
900596b8d2eSBarry Smith         }
901187ce0cbSSatish Balay       }
902aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
903187ce0cbSSatish Balay       if (k> max) max = k;
904187ce0cbSSatish Balay #endif
905596b8d2eSBarry Smith     }
906596b8d2eSBarry Smith   }
907596b8d2eSBarry Smith   /* Loop Over B */
9080bdbc534SSatish Balay   for (i=0; i<b->mbs; i++) {
909596b8d2eSBarry Smith     for (j=bi[i]; j<bi[i+1]; j++) {
9100bdbc534SSatish Balay       row = i+rstart;
9110bdbc534SSatish Balay       col = garray[bj[j]];
912187ce0cbSSatish Balay       key = row*Nbs + col + 1;
913c2760754SSatish Balay       h1  = HASH(size,key,tmp);
9140bdbc534SSatish Balay       for (k=0; k<size; k++){
9150bdbc534SSatish Balay         if (HT[(h1+k)%size] == 0.0) {
9160bdbc534SSatish Balay           HT[(h1+k)%size] = key;
9170bdbc534SSatish Balay           HD[(h1+k)%size] = b->a + j*bs2;
918596b8d2eSBarry Smith           break;
919aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
920187ce0cbSSatish Balay         } else {
921187ce0cbSSatish Balay           ct++;
922187ce0cbSSatish Balay #endif
923596b8d2eSBarry Smith         }
924187ce0cbSSatish Balay       }
925aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
926187ce0cbSSatish Balay       if (k> max) max = k;
927187ce0cbSSatish Balay #endif
928596b8d2eSBarry Smith     }
929596b8d2eSBarry Smith   }
930596b8d2eSBarry Smith 
931596b8d2eSBarry Smith   /* Print Summary */
932aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
933c38d4ed2SBarry Smith   for (i=0,j=0; i<size; i++) {
934596b8d2eSBarry Smith     if (HT[i]) {j++;}
935c38d4ed2SBarry Smith   }
936b0a32e0cSBarry Smith   PetscLogInfo(0,"MatCreateHashTable_MPIBAIJ_Private: Average Search = %5.2f,max search = %d\n",(j== 0)? 0.0:((PetscReal)(ct+j))/j,max);
937187ce0cbSSatish Balay #endif
9383a40ed3dSBarry Smith   PetscFunctionReturn(0);
939596b8d2eSBarry Smith }
94057b952d6SSatish Balay 
9414a2ae208SSatish Balay #undef __FUNCT__
9424a2ae208SSatish Balay #define __FUNCT__ "MatAssemblyBegin_MPIBAIJ"
943bbb85fb3SSatish Balay int MatAssemblyBegin_MPIBAIJ(Mat mat,MatAssemblyType mode)
944bbb85fb3SSatish Balay {
945bbb85fb3SSatish Balay   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;
946ff2fd236SBarry Smith   int         ierr,nstash,reallocs;
947bbb85fb3SSatish Balay   InsertMode  addv;
948bbb85fb3SSatish Balay 
949bbb85fb3SSatish Balay   PetscFunctionBegin;
950bbb85fb3SSatish Balay   if (baij->donotstash) {
951bbb85fb3SSatish Balay     PetscFunctionReturn(0);
952bbb85fb3SSatish Balay   }
953bbb85fb3SSatish Balay 
954bbb85fb3SSatish Balay   /* make sure all processors are either in INSERTMODE or ADDMODE */
955bbb85fb3SSatish Balay   ierr = MPI_Allreduce(&mat->insertmode,&addv,1,MPI_INT,MPI_BOR,mat->comm);CHKERRQ(ierr);
956bbb85fb3SSatish Balay   if (addv == (ADD_VALUES|INSERT_VALUES)) {
95729bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Some processors inserted others added");
958bbb85fb3SSatish Balay   }
959bbb85fb3SSatish Balay   mat->insertmode = addv; /* in case this processor had no cache */
960bbb85fb3SSatish Balay 
9618798bf22SSatish Balay   ierr = MatStashScatterBegin_Private(&mat->stash,baij->rowners_bs);CHKERRQ(ierr);
9628798bf22SSatish Balay   ierr = MatStashScatterBegin_Private(&mat->bstash,baij->rowners);CHKERRQ(ierr);
9638798bf22SSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
964b0a32e0cSBarry Smith   PetscLogInfo(0,"MatAssemblyBegin_MPIBAIJ:Stash has %d entries,uses %d mallocs.\n",nstash,reallocs);
96546680499SSatish Balay   ierr = MatStashGetInfo_Private(&mat->bstash,&nstash,&reallocs);CHKERRQ(ierr);
966b0a32e0cSBarry Smith   PetscLogInfo(0,"MatAssemblyBegin_MPIBAIJ:Block-Stash has %d entries, uses %d mallocs.\n",nstash,reallocs);
967bbb85fb3SSatish Balay   PetscFunctionReturn(0);
968bbb85fb3SSatish Balay }
969bbb85fb3SSatish Balay 
9704a2ae208SSatish Balay #undef __FUNCT__
9714a2ae208SSatish Balay #define __FUNCT__ "MatAssemblyEnd_MPIBAIJ"
972bbb85fb3SSatish Balay int MatAssemblyEnd_MPIBAIJ(Mat mat,MatAssemblyType mode)
973bbb85fb3SSatish Balay {
974bbb85fb3SSatish Balay   Mat_MPIBAIJ *baij=(Mat_MPIBAIJ*)mat->data;
975a2d1c673SSatish Balay   Mat_SeqBAIJ *a=(Mat_SeqBAIJ*)baij->A->data,*b=(Mat_SeqBAIJ*)baij->B->data;
976a2d1c673SSatish Balay   int         i,j,rstart,ncols,n,ierr,flg,bs2=baij->bs2;
9777c922b88SBarry Smith   int         *row,*col,other_disassembled;
9787c922b88SBarry Smith   PetscTruth  r1,r2,r3;
9793eda8832SBarry Smith   MatScalar   *val;
980bbb85fb3SSatish Balay   InsertMode  addv = mat->insertmode;
981bbb85fb3SSatish Balay 
982bbb85fb3SSatish Balay   PetscFunctionBegin;
983bbb85fb3SSatish Balay   if (!baij->donotstash) {
984a2d1c673SSatish Balay     while (1) {
9858798bf22SSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
986a2d1c673SSatish Balay       if (!flg) break;
987a2d1c673SSatish Balay 
988bbb85fb3SSatish Balay       for (i=0; i<n;) {
989bbb85fb3SSatish Balay         /* Now identify the consecutive vals belonging to the same row */
990bbb85fb3SSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
991bbb85fb3SSatish Balay         if (j < n) ncols = j-i;
992bbb85fb3SSatish Balay         else       ncols = n-i;
993bbb85fb3SSatish Balay         /* Now assemble all these values with a single function call */
99493fea6afSBarry Smith         ierr = MatSetValues_MPIBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i,addv);CHKERRQ(ierr);
995bbb85fb3SSatish Balay         i = j;
996bbb85fb3SSatish Balay       }
997bbb85fb3SSatish Balay     }
9988798bf22SSatish Balay     ierr = MatStashScatterEnd_Private(&mat->stash);CHKERRQ(ierr);
999a2d1c673SSatish Balay     /* Now process the block-stash. Since the values are stashed column-oriented,
1000a2d1c673SSatish Balay        set the roworiented flag to column oriented, and after MatSetValues()
1001a2d1c673SSatish Balay        restore the original flags */
1002a2d1c673SSatish Balay     r1 = baij->roworiented;
1003a2d1c673SSatish Balay     r2 = a->roworiented;
1004a2d1c673SSatish Balay     r3 = b->roworiented;
10057c922b88SBarry Smith     baij->roworiented = PETSC_FALSE;
10067c922b88SBarry Smith     a->roworiented    = PETSC_FALSE;
10077c922b88SBarry Smith     b->roworiented    = PETSC_FALSE;
1008a2d1c673SSatish Balay     while (1) {
10098798bf22SSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->bstash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
1010a2d1c673SSatish Balay       if (!flg) break;
1011a2d1c673SSatish Balay 
1012a2d1c673SSatish Balay       for (i=0; i<n;) {
1013a2d1c673SSatish Balay         /* Now identify the consecutive vals belonging to the same row */
1014a2d1c673SSatish Balay         for (j=i,rstart=row[j]; j<n; j++) { if (row[j] != rstart) break; }
1015a2d1c673SSatish Balay         if (j < n) ncols = j-i;
1016a2d1c673SSatish Balay         else       ncols = n-i;
101793fea6afSBarry Smith         ierr = MatSetValuesBlocked_MPIBAIJ_MatScalar(mat,1,row+i,ncols,col+i,val+i*bs2,addv);CHKERRQ(ierr);
1018a2d1c673SSatish Balay         i = j;
1019a2d1c673SSatish Balay       }
1020a2d1c673SSatish Balay     }
10218798bf22SSatish Balay     ierr = MatStashScatterEnd_Private(&mat->bstash);CHKERRQ(ierr);
1022a2d1c673SSatish Balay     baij->roworiented = r1;
1023a2d1c673SSatish Balay     a->roworiented    = r2;
1024a2d1c673SSatish Balay     b->roworiented    = r3;
1025bbb85fb3SSatish Balay   }
1026bbb85fb3SSatish Balay 
1027bbb85fb3SSatish Balay   ierr = MatAssemblyBegin(baij->A,mode);CHKERRQ(ierr);
1028bbb85fb3SSatish Balay   ierr = MatAssemblyEnd(baij->A,mode);CHKERRQ(ierr);
1029bbb85fb3SSatish Balay 
1030bbb85fb3SSatish Balay   /* determine if any processor has disassembled, if so we must
1031bbb85fb3SSatish Balay      also disassemble ourselfs, in order that we may reassemble. */
1032bbb85fb3SSatish Balay   /*
1033bbb85fb3SSatish Balay      if nonzero structure of submatrix B cannot change then we know that
1034bbb85fb3SSatish Balay      no processor disassembled thus we can skip this stuff
1035bbb85fb3SSatish Balay   */
1036bbb85fb3SSatish Balay   if (!((Mat_SeqBAIJ*)baij->B->data)->nonew)  {
1037bbb85fb3SSatish Balay     ierr = MPI_Allreduce(&mat->was_assembled,&other_disassembled,1,MPI_INT,MPI_PROD,mat->comm);CHKERRQ(ierr);
1038bbb85fb3SSatish Balay     if (mat->was_assembled && !other_disassembled) {
1039bbb85fb3SSatish Balay       ierr = DisAssemble_MPIBAIJ(mat);CHKERRQ(ierr);
1040bbb85fb3SSatish Balay     }
1041bbb85fb3SSatish Balay   }
1042bbb85fb3SSatish Balay 
1043bbb85fb3SSatish Balay   if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) {
1044bbb85fb3SSatish Balay     ierr = MatSetUpMultiply_MPIBAIJ(mat);CHKERRQ(ierr);
1045bbb85fb3SSatish Balay   }
1046bbb85fb3SSatish Balay   ierr = MatAssemblyBegin(baij->B,mode);CHKERRQ(ierr);
1047bbb85fb3SSatish Balay   ierr = MatAssemblyEnd(baij->B,mode);CHKERRQ(ierr);
1048bbb85fb3SSatish Balay 
1049aa482453SBarry Smith #if defined(PETSC_USE_BOPT_g)
1050bbb85fb3SSatish Balay   if (baij->ht && mode== MAT_FINAL_ASSEMBLY) {
1051b0a32e0cSBarry Smith     PetscLogInfo(0,"MatAssemblyEnd_MPIBAIJ:Average Hash Table Search in MatSetValues = %5.2f\n",((double)baij->ht_total_ct)/baij->ht_insert_ct);
1052bbb85fb3SSatish Balay     baij->ht_total_ct  = 0;
1053bbb85fb3SSatish Balay     baij->ht_insert_ct = 0;
1054bbb85fb3SSatish Balay   }
1055bbb85fb3SSatish Balay #endif
1056bbb85fb3SSatish Balay   if (baij->ht_flag && !baij->ht && mode == MAT_FINAL_ASSEMBLY) {
1057bbb85fb3SSatish Balay     ierr = MatCreateHashTable_MPIBAIJ_Private(mat,baij->ht_fact);CHKERRQ(ierr);
1058bbb85fb3SSatish Balay     mat->ops->setvalues        = MatSetValues_MPIBAIJ_HT;
1059bbb85fb3SSatish Balay     mat->ops->setvaluesblocked = MatSetValuesBlocked_MPIBAIJ_HT;
1060bbb85fb3SSatish Balay   }
1061bbb85fb3SSatish Balay 
1062606d414cSSatish Balay   if (baij->rowvalues) {
1063606d414cSSatish Balay     ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);
1064606d414cSSatish Balay     baij->rowvalues = 0;
1065606d414cSSatish Balay   }
1066bbb85fb3SSatish Balay   PetscFunctionReturn(0);
1067bbb85fb3SSatish Balay }
106857b952d6SSatish Balay 
10694a2ae208SSatish Balay #undef __FUNCT__
10704a2ae208SSatish Balay #define __FUNCT__ "MatView_MPIBAIJ_ASCIIorDraworSocket"
1071b0a32e0cSBarry Smith static int MatView_MPIBAIJ_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
107257b952d6SSatish Balay {
107357b952d6SSatish Balay   Mat_MPIBAIJ       *baij = (Mat_MPIBAIJ*)mat->data;
1074fb9695e5SSatish Balay   int               ierr,bs = baij->bs,size = baij->size,rank = baij->rank;
10756831982aSBarry Smith   PetscTruth        isascii,isdraw;
1076b0a32e0cSBarry Smith   PetscViewer       sviewer;
1077f3ef73ceSBarry Smith   PetscViewerFormat format;
107857b952d6SSatish Balay 
1079d64ed03dSBarry Smith   PetscFunctionBegin;
1080b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
1081fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_DRAW,&isdraw);CHKERRQ(ierr);
10820f5bd95cSBarry Smith   if (isascii) {
1083b0a32e0cSBarry Smith     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
1084fb9695e5SSatish Balay     if (format == PETSC_VIEWER_ASCII_INFO_LONG) {
10854e220ebcSLois Curfman McInnes       MatInfo info;
1086d132466eSBarry Smith       ierr = MPI_Comm_rank(mat->comm,&rank);CHKERRQ(ierr);
1087d41123aaSBarry Smith       ierr = MatGetInfo(mat,MAT_LOCAL,&info);CHKERRQ(ierr);
1088b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] Local rows %d nz %d nz alloced %d bs %d mem %d\n",
1089273d9f13SBarry Smith               rank,mat->m,(int)info.nz_used*bs,(int)info.nz_allocated*bs,
10906831982aSBarry Smith               baij->bs,(int)info.memory);CHKERRQ(ierr);
1091d132466eSBarry Smith       ierr = MatGetInfo(baij->A,MAT_LOCAL,&info);CHKERRQ(ierr);
1092b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] on-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
1093d132466eSBarry Smith       ierr = MatGetInfo(baij->B,MAT_LOCAL,&info);CHKERRQ(ierr);
1094b0a32e0cSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"[%d] off-diagonal part: nz %d \n",rank,(int)info.nz_used*bs);CHKERRQ(ierr);
1095b0a32e0cSBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
109657b952d6SSatish Balay       ierr = VecScatterView(baij->Mvctx,viewer);CHKERRQ(ierr);
10973a40ed3dSBarry Smith       PetscFunctionReturn(0);
1098fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
1099b0a32e0cSBarry Smith       ierr = PetscViewerASCIIPrintf(viewer,"  block size is %d\n",bs);CHKERRQ(ierr);
11003a40ed3dSBarry Smith       PetscFunctionReturn(0);
110157b952d6SSatish Balay     }
110257b952d6SSatish Balay   }
110357b952d6SSatish Balay 
11040f5bd95cSBarry Smith   if (isdraw) {
1105b0a32e0cSBarry Smith     PetscDraw       draw;
110657b952d6SSatish Balay     PetscTruth isnull;
1107b0a32e0cSBarry Smith     ierr = PetscViewerDrawGetDraw(viewer,0,&draw);CHKERRQ(ierr);
1108b0a32e0cSBarry Smith     ierr = PetscDrawIsNull(draw,&isnull);CHKERRQ(ierr); if (isnull) PetscFunctionReturn(0);
110957b952d6SSatish Balay   }
111057b952d6SSatish Balay 
111157b952d6SSatish Balay   if (size == 1) {
1112873048abSBarry Smith     ierr = PetscObjectSetName((PetscObject)baij->A,mat->name);CHKERRQ(ierr);
111357b952d6SSatish Balay     ierr = MatView(baij->A,viewer);CHKERRQ(ierr);
1114d64ed03dSBarry Smith   } else {
111557b952d6SSatish Balay     /* assemble the entire matrix onto first processor. */
111657b952d6SSatish Balay     Mat         A;
111757b952d6SSatish Balay     Mat_SeqBAIJ *Aloc;
1118273d9f13SBarry Smith     int         M = mat->M,N = mat->N,*ai,*aj,col,i,j,k,*rvals,mbs = baij->mbs;
11193eda8832SBarry Smith     MatScalar   *a;
112057b952d6SSatish Balay 
112157b952d6SSatish Balay     if (!rank) {
112255843e3eSBarry Smith       ierr = MatCreateMPIBAIJ(mat->comm,baij->bs,M,N,M,N,0,PETSC_NULL,0,PETSC_NULL,&A);CHKERRQ(ierr);
1123d64ed03dSBarry Smith     } else {
112455843e3eSBarry Smith       ierr = MatCreateMPIBAIJ(mat->comm,baij->bs,0,0,M,N,0,PETSC_NULL,0,PETSC_NULL,&A);CHKERRQ(ierr);
112557b952d6SSatish Balay     }
1126b0a32e0cSBarry Smith     PetscLogObjectParent(mat,A);
112757b952d6SSatish Balay 
112857b952d6SSatish Balay     /* copy over the A part */
112957b952d6SSatish Balay     Aloc = (Mat_SeqBAIJ*)baij->A->data;
113057b952d6SSatish Balay     ai   = Aloc->i; aj = Aloc->j; a = Aloc->a;
113182502324SSatish Balay     ierr = PetscMalloc(bs*sizeof(int),&rvals);CHKERRQ(ierr);
113257b952d6SSatish Balay 
113357b952d6SSatish Balay     for (i=0; i<mbs; i++) {
113457b952d6SSatish Balay       rvals[0] = bs*(baij->rstart + i);
113557b952d6SSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
113657b952d6SSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
113757b952d6SSatish Balay         col = (baij->cstart+aj[j])*bs;
113857b952d6SSatish Balay         for (k=0; k<bs; k++) {
113993fea6afSBarry Smith           ierr = MatSetValues_MPIBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
1140cee3aa6bSSatish Balay           col++; a += bs;
114157b952d6SSatish Balay         }
114257b952d6SSatish Balay       }
114357b952d6SSatish Balay     }
114457b952d6SSatish Balay     /* copy over the B part */
114557b952d6SSatish Balay     Aloc = (Mat_SeqBAIJ*)baij->B->data;
114657b952d6SSatish Balay     ai = Aloc->i; aj = Aloc->j; a = Aloc->a;
114757b952d6SSatish Balay     for (i=0; i<mbs; i++) {
114857b952d6SSatish Balay       rvals[0] = bs*(baij->rstart + i);
114957b952d6SSatish Balay       for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
115057b952d6SSatish Balay       for (j=ai[i]; j<ai[i+1]; j++) {
115157b952d6SSatish Balay         col = baij->garray[aj[j]]*bs;
115257b952d6SSatish Balay         for (k=0; k<bs; k++) {
115393fea6afSBarry Smith           ierr = MatSetValues_MPIBAIJ_MatScalar(A,bs,rvals,1,&col,a,INSERT_VALUES);CHKERRQ(ierr);
1154cee3aa6bSSatish Balay           col++; a += bs;
115557b952d6SSatish Balay         }
115657b952d6SSatish Balay       }
115757b952d6SSatish Balay     }
1158606d414cSSatish Balay     ierr = PetscFree(rvals);CHKERRQ(ierr);
11596d4a8577SBarry Smith     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
11606d4a8577SBarry Smith     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
116155843e3eSBarry Smith     /*
116255843e3eSBarry Smith        Everyone has to call to draw the matrix since the graphics waits are
1163b0a32e0cSBarry Smith        synchronized across all processors that share the PetscDraw object
116455843e3eSBarry Smith     */
1165b0a32e0cSBarry Smith     ierr = PetscViewerGetSingleton(viewer,&sviewer);CHKERRQ(ierr);
1166f14a1c24SBarry Smith     if (!rank) {
1167e36acaf3SBarry Smith       ierr = PetscObjectSetName((PetscObject)((Mat_MPIBAIJ*)(A->data))->A,mat->name);CHKERRQ(ierr);
11686831982aSBarry Smith       ierr = MatView(((Mat_MPIBAIJ*)(A->data))->A,sviewer);CHKERRQ(ierr);
116957b952d6SSatish Balay     }
1170b0a32e0cSBarry Smith     ierr = PetscViewerRestoreSingleton(viewer,&sviewer);CHKERRQ(ierr);
117157b952d6SSatish Balay     ierr = MatDestroy(A);CHKERRQ(ierr);
117257b952d6SSatish Balay   }
11733a40ed3dSBarry Smith   PetscFunctionReturn(0);
117457b952d6SSatish Balay }
117557b952d6SSatish Balay 
11764a2ae208SSatish Balay #undef __FUNCT__
11774a2ae208SSatish Balay #define __FUNCT__ "MatView_MPIBAIJ"
1178b0a32e0cSBarry Smith int MatView_MPIBAIJ(Mat mat,PetscViewer viewer)
117957b952d6SSatish Balay {
118057b952d6SSatish Balay   int        ierr;
11816831982aSBarry Smith   PetscTruth isascii,isdraw,issocket,isbinary;
118257b952d6SSatish Balay 
1183d64ed03dSBarry Smith   PetscFunctionBegin;
1184b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_ASCII,&isascii);CHKERRQ(ierr);
1185fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_DRAW,&isdraw);CHKERRQ(ierr);
1186b0a32e0cSBarry Smith   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_SOCKET,&issocket);CHKERRQ(ierr);
1187fb9695e5SSatish Balay   ierr = PetscTypeCompare((PetscObject)viewer,PETSC_VIEWER_BINARY,&isbinary);CHKERRQ(ierr);
11880f5bd95cSBarry Smith   if (isascii || isdraw || issocket || isbinary) {
11897b2a1423SBarry Smith     ierr = MatView_MPIBAIJ_ASCIIorDraworSocket(mat,viewer);CHKERRQ(ierr);
11905cd90555SBarry Smith   } else {
119129bbc08cSBarry Smith     SETERRQ1(1,"Viewer type %s not supported by MPIBAIJ matrices",((PetscObject)viewer)->type_name);
119257b952d6SSatish Balay   }
11933a40ed3dSBarry Smith   PetscFunctionReturn(0);
119457b952d6SSatish Balay }
119557b952d6SSatish Balay 
11964a2ae208SSatish Balay #undef __FUNCT__
11974a2ae208SSatish Balay #define __FUNCT__ "MatDestroy_MPIBAIJ"
1198e1311b90SBarry Smith int MatDestroy_MPIBAIJ(Mat mat)
119979bdfe76SSatish Balay {
120079bdfe76SSatish Balay   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;
120179bdfe76SSatish Balay   int         ierr;
120279bdfe76SSatish Balay 
1203d64ed03dSBarry Smith   PetscFunctionBegin;
1204aa482453SBarry Smith #if defined(PETSC_USE_LOG)
1205b0a32e0cSBarry Smith   PetscLogObjectState((PetscObject)mat,"Rows=%d,Cols=%d",mat->M,mat->N);
120679bdfe76SSatish Balay #endif
12078798bf22SSatish Balay   ierr = MatStashDestroy_Private(&mat->stash);CHKERRQ(ierr);
12088798bf22SSatish Balay   ierr = MatStashDestroy_Private(&mat->bstash);CHKERRQ(ierr);
1209606d414cSSatish Balay   ierr = PetscFree(baij->rowners);CHKERRQ(ierr);
121079bdfe76SSatish Balay   ierr = MatDestroy(baij->A);CHKERRQ(ierr);
121179bdfe76SSatish Balay   ierr = MatDestroy(baij->B);CHKERRQ(ierr);
1212aa482453SBarry Smith #if defined (PETSC_USE_CTABLE)
12130f5bd95cSBarry Smith   if (baij->colmap) {ierr = PetscTableDelete(baij->colmap);CHKERRQ(ierr);}
121448e59246SSatish Balay #else
1215606d414cSSatish Balay   if (baij->colmap) {ierr = PetscFree(baij->colmap);CHKERRQ(ierr);}
121648e59246SSatish Balay #endif
1217606d414cSSatish Balay   if (baij->garray) {ierr = PetscFree(baij->garray);CHKERRQ(ierr);}
1218606d414cSSatish Balay   if (baij->lvec)   {ierr = VecDestroy(baij->lvec);CHKERRQ(ierr);}
1219606d414cSSatish Balay   if (baij->Mvctx)  {ierr = VecScatterDestroy(baij->Mvctx);CHKERRQ(ierr);}
1220606d414cSSatish Balay   if (baij->rowvalues) {ierr = PetscFree(baij->rowvalues);CHKERRQ(ierr);}
1221606d414cSSatish Balay   if (baij->barray) {ierr = PetscFree(baij->barray);CHKERRQ(ierr);}
1222606d414cSSatish Balay   if (baij->hd) {ierr = PetscFree(baij->hd);CHKERRQ(ierr);}
12236fa18ffdSBarry Smith #if defined(PETSC_USE_MAT_SINGLE)
12246fa18ffdSBarry Smith   if (baij->setvaluescopy) {ierr = PetscFree(baij->setvaluescopy);CHKERRQ(ierr);}
12256fa18ffdSBarry Smith #endif
1226606d414cSSatish Balay   ierr = PetscFree(baij);CHKERRQ(ierr);
12273a40ed3dSBarry Smith   PetscFunctionReturn(0);
122879bdfe76SSatish Balay }
122979bdfe76SSatish Balay 
12304a2ae208SSatish Balay #undef __FUNCT__
12314a2ae208SSatish Balay #define __FUNCT__ "MatMult_MPIBAIJ"
1232ec1ea8d8SLois Curfman McInnes int MatMult_MPIBAIJ(Mat A,Vec xx,Vec yy)
1233cee3aa6bSSatish Balay {
1234cee3aa6bSSatish Balay   Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data;
123547b4a8eaSLois Curfman McInnes   int         ierr,nt;
1236cee3aa6bSSatish Balay 
1237d64ed03dSBarry Smith   PetscFunctionBegin;
1238e1311b90SBarry Smith   ierr = VecGetLocalSize(xx,&nt);CHKERRQ(ierr);
1239273d9f13SBarry Smith   if (nt != A->n) {
124029bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible partition of A and xx");
124147b4a8eaSLois Curfman McInnes   }
1242e1311b90SBarry Smith   ierr = VecGetLocalSize(yy,&nt);CHKERRQ(ierr);
1243273d9f13SBarry Smith   if (nt != A->m) {
124429bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_SIZ,"Incompatible parition of A and yy");
124547b4a8eaSLois Curfman McInnes   }
124643a90d84SBarry Smith   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
1247f830108cSBarry Smith   ierr = (*a->A->ops->mult)(a->A,xx,yy);CHKERRQ(ierr);
124843a90d84SBarry Smith   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
1249f830108cSBarry Smith   ierr = (*a->B->ops->multadd)(a->B,a->lvec,yy,yy);CHKERRQ(ierr);
125043a90d84SBarry Smith   ierr = VecScatterPostRecvs(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
12513a40ed3dSBarry Smith   PetscFunctionReturn(0);
1252cee3aa6bSSatish Balay }
1253cee3aa6bSSatish Balay 
12544a2ae208SSatish Balay #undef __FUNCT__
12554a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_MPIBAIJ"
1256ec1ea8d8SLois Curfman McInnes int MatMultAdd_MPIBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
1257cee3aa6bSSatish Balay {
1258cee3aa6bSSatish Balay   Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data;
1259cee3aa6bSSatish Balay   int        ierr;
1260d64ed03dSBarry Smith 
1261d64ed03dSBarry Smith   PetscFunctionBegin;
126243a90d84SBarry Smith   ierr = VecScatterBegin(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
1263f830108cSBarry Smith   ierr = (*a->A->ops->multadd)(a->A,xx,yy,zz);CHKERRQ(ierr);
126443a90d84SBarry Smith   ierr = VecScatterEnd(xx,a->lvec,INSERT_VALUES,SCATTER_FORWARD,a->Mvctx);CHKERRQ(ierr);
1265f830108cSBarry Smith   ierr = (*a->B->ops->multadd)(a->B,a->lvec,zz,zz);CHKERRQ(ierr);
12663a40ed3dSBarry Smith   PetscFunctionReturn(0);
1267cee3aa6bSSatish Balay }
1268cee3aa6bSSatish Balay 
12694a2ae208SSatish Balay #undef __FUNCT__
12704a2ae208SSatish Balay #define __FUNCT__ "MatMultTranspose_MPIBAIJ"
12717c922b88SBarry Smith int MatMultTranspose_MPIBAIJ(Mat A,Vec xx,Vec yy)
1272cee3aa6bSSatish Balay {
1273cee3aa6bSSatish Balay   Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data;
1274cee3aa6bSSatish Balay   int         ierr;
1275cee3aa6bSSatish Balay 
1276d64ed03dSBarry Smith   PetscFunctionBegin;
1277cee3aa6bSSatish Balay   /* do nondiagonal part */
12787c922b88SBarry Smith   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
1279cee3aa6bSSatish Balay   /* send it on its way */
1280537820f0SBarry Smith   ierr = VecScatterBegin(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
1281cee3aa6bSSatish Balay   /* do local part */
12827c922b88SBarry Smith   ierr = (*a->A->ops->multtranspose)(a->A,xx,yy);CHKERRQ(ierr);
1283cee3aa6bSSatish Balay   /* receive remote parts: note this assumes the values are not actually */
1284cee3aa6bSSatish Balay   /* inserted in yy until the next line, which is true for my implementation*/
1285cee3aa6bSSatish Balay   /* but is not perhaps always true. */
1286639f9d9dSBarry Smith   ierr = VecScatterEnd(a->lvec,yy,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
12873a40ed3dSBarry Smith   PetscFunctionReturn(0);
1288cee3aa6bSSatish Balay }
1289cee3aa6bSSatish Balay 
12904a2ae208SSatish Balay #undef __FUNCT__
12914a2ae208SSatish Balay #define __FUNCT__ "MatMultTransposeAdd_MPIBAIJ"
12927c922b88SBarry Smith int MatMultTransposeAdd_MPIBAIJ(Mat A,Vec xx,Vec yy,Vec zz)
1293cee3aa6bSSatish Balay {
1294cee3aa6bSSatish Balay   Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data;
1295cee3aa6bSSatish Balay   int         ierr;
1296cee3aa6bSSatish Balay 
1297d64ed03dSBarry Smith   PetscFunctionBegin;
1298cee3aa6bSSatish Balay   /* do nondiagonal part */
12997c922b88SBarry Smith   ierr = (*a->B->ops->multtranspose)(a->B,xx,a->lvec);CHKERRQ(ierr);
1300cee3aa6bSSatish Balay   /* send it on its way */
1301537820f0SBarry Smith   ierr = VecScatterBegin(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
1302cee3aa6bSSatish Balay   /* do local part */
13037c922b88SBarry Smith   ierr = (*a->A->ops->multtransposeadd)(a->A,xx,yy,zz);CHKERRQ(ierr);
1304cee3aa6bSSatish Balay   /* receive remote parts: note this assumes the values are not actually */
1305cee3aa6bSSatish Balay   /* inserted in yy until the next line, which is true for my implementation*/
1306cee3aa6bSSatish Balay   /* but is not perhaps always true. */
1307537820f0SBarry Smith   ierr = VecScatterEnd(a->lvec,zz,ADD_VALUES,SCATTER_REVERSE,a->Mvctx);CHKERRQ(ierr);
13083a40ed3dSBarry Smith   PetscFunctionReturn(0);
1309cee3aa6bSSatish Balay }
1310cee3aa6bSSatish Balay 
1311cee3aa6bSSatish Balay /*
1312cee3aa6bSSatish Balay   This only works correctly for square matrices where the subblock A->A is the
1313cee3aa6bSSatish Balay    diagonal block
1314cee3aa6bSSatish Balay */
13154a2ae208SSatish Balay #undef __FUNCT__
13164a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonal_MPIBAIJ"
1317ec1ea8d8SLois Curfman McInnes int MatGetDiagonal_MPIBAIJ(Mat A,Vec v)
1318cee3aa6bSSatish Balay {
1319cee3aa6bSSatish Balay   Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data;
13203a40ed3dSBarry Smith   int         ierr;
1321d64ed03dSBarry Smith 
1322d64ed03dSBarry Smith   PetscFunctionBegin;
1323273d9f13SBarry Smith   if (A->M != A->N) SETERRQ(PETSC_ERR_SUP,"Supports only square matrix where A->A is diag block");
13243a40ed3dSBarry Smith   ierr = MatGetDiagonal(a->A,v);CHKERRQ(ierr);
13253a40ed3dSBarry Smith   PetscFunctionReturn(0);
1326cee3aa6bSSatish Balay }
1327cee3aa6bSSatish Balay 
13284a2ae208SSatish Balay #undef __FUNCT__
13294a2ae208SSatish Balay #define __FUNCT__ "MatScale_MPIBAIJ"
1330ec1ea8d8SLois Curfman McInnes int MatScale_MPIBAIJ(Scalar *aa,Mat A)
1331cee3aa6bSSatish Balay {
1332cee3aa6bSSatish Balay   Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data;
1333cee3aa6bSSatish Balay   int         ierr;
1334d64ed03dSBarry Smith 
1335d64ed03dSBarry Smith   PetscFunctionBegin;
1336cee3aa6bSSatish Balay   ierr = MatScale(aa,a->A);CHKERRQ(ierr);
1337cee3aa6bSSatish Balay   ierr = MatScale(aa,a->B);CHKERRQ(ierr);
13383a40ed3dSBarry Smith   PetscFunctionReturn(0);
1339cee3aa6bSSatish Balay }
1340026e39d0SSatish Balay 
13414a2ae208SSatish Balay #undef __FUNCT__
13424a2ae208SSatish Balay #define __FUNCT__ "MatGetOwnershipRange_MPIBAIJ"
1343ec1ea8d8SLois Curfman McInnes int MatGetOwnershipRange_MPIBAIJ(Mat matin,int *m,int *n)
134457b952d6SSatish Balay {
134557b952d6SSatish Balay   Mat_MPIBAIJ *mat = (Mat_MPIBAIJ*)matin->data;
1346d64ed03dSBarry Smith 
1347d64ed03dSBarry Smith   PetscFunctionBegin;
1348273d9f13SBarry Smith   if (m) *m = mat->rstart_bs;
1349273d9f13SBarry Smith   if (n) *n = mat->rend_bs;
13503a40ed3dSBarry Smith   PetscFunctionReturn(0);
135157b952d6SSatish Balay }
135257b952d6SSatish Balay 
13534a2ae208SSatish Balay #undef __FUNCT__
13544a2ae208SSatish Balay #define __FUNCT__ "MatGetRow_MPIBAIJ"
1355acdf5bf4SSatish Balay int MatGetRow_MPIBAIJ(Mat matin,int row,int *nz,int **idx,Scalar **v)
1356acdf5bf4SSatish Balay {
1357acdf5bf4SSatish Balay   Mat_MPIBAIJ *mat = (Mat_MPIBAIJ*)matin->data;
1358acdf5bf4SSatish Balay   Scalar     *vworkA,*vworkB,**pvA,**pvB,*v_p;
1359acdf5bf4SSatish Balay   int        bs = mat->bs,bs2 = mat->bs2,i,ierr,*cworkA,*cworkB,**pcA,**pcB;
1360d9d09a02SSatish Balay   int        nztot,nzA,nzB,lrow,brstart = mat->rstart*bs,brend = mat->rend*bs;
1361d9d09a02SSatish Balay   int        *cmap,*idx_p,cstart = mat->cstart;
1362acdf5bf4SSatish Balay 
1363d64ed03dSBarry Smith   PetscFunctionBegin;
136429bbc08cSBarry Smith   if (mat->getrowactive == PETSC_TRUE) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Already active");
1365acdf5bf4SSatish Balay   mat->getrowactive = PETSC_TRUE;
1366acdf5bf4SSatish Balay 
1367acdf5bf4SSatish Balay   if (!mat->rowvalues && (idx || v)) {
1368acdf5bf4SSatish Balay     /*
1369acdf5bf4SSatish Balay         allocate enough space to hold information from the longest row.
1370acdf5bf4SSatish Balay     */
1371acdf5bf4SSatish Balay     Mat_SeqBAIJ *Aa = (Mat_SeqBAIJ*)mat->A->data,*Ba = (Mat_SeqBAIJ*)mat->B->data;
1372bd16c2feSSatish Balay     int     max = 1,mbs = mat->mbs,tmp;
1373bd16c2feSSatish Balay     for (i=0; i<mbs; i++) {
1374acdf5bf4SSatish Balay       tmp = Aa->i[i+1] - Aa->i[i] + Ba->i[i+1] - Ba->i[i];
1375acdf5bf4SSatish Balay       if (max < tmp) { max = tmp; }
1376acdf5bf4SSatish Balay     }
1377b0a32e0cSBarry Smith     ierr = PetscMalloc(max*bs2*(sizeof(int)+sizeof(Scalar)),&mat->rowvalues);CHKERRQ(ierr);
1378acdf5bf4SSatish Balay     mat->rowindices = (int*)(mat->rowvalues + max*bs2);
1379acdf5bf4SSatish Balay   }
1380acdf5bf4SSatish Balay 
138129bbc08cSBarry Smith   if (row < brstart || row >= brend) SETERRQ(PETSC_ERR_SUP,"Only local rows")
1382d9d09a02SSatish Balay   lrow = row - brstart;
1383acdf5bf4SSatish Balay 
1384acdf5bf4SSatish Balay   pvA = &vworkA; pcA = &cworkA; pvB = &vworkB; pcB = &cworkB;
1385acdf5bf4SSatish Balay   if (!v)   {pvA = 0; pvB = 0;}
1386acdf5bf4SSatish Balay   if (!idx) {pcA = 0; if (!v) pcB = 0;}
1387f830108cSBarry Smith   ierr = (*mat->A->ops->getrow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
1388f830108cSBarry Smith   ierr = (*mat->B->ops->getrow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
1389acdf5bf4SSatish Balay   nztot = nzA + nzB;
1390acdf5bf4SSatish Balay 
1391acdf5bf4SSatish Balay   cmap  = mat->garray;
1392acdf5bf4SSatish Balay   if (v  || idx) {
1393acdf5bf4SSatish Balay     if (nztot) {
1394acdf5bf4SSatish Balay       /* Sort by increasing column numbers, assuming A and B already sorted */
1395acdf5bf4SSatish Balay       int imark = -1;
1396acdf5bf4SSatish Balay       if (v) {
1397acdf5bf4SSatish Balay         *v = v_p = mat->rowvalues;
1398acdf5bf4SSatish Balay         for (i=0; i<nzB; i++) {
1399d9d09a02SSatish Balay           if (cmap[cworkB[i]/bs] < cstart)   v_p[i] = vworkB[i];
1400acdf5bf4SSatish Balay           else break;
1401acdf5bf4SSatish Balay         }
1402acdf5bf4SSatish Balay         imark = i;
1403acdf5bf4SSatish Balay         for (i=0; i<nzA; i++)     v_p[imark+i] = vworkA[i];
1404acdf5bf4SSatish Balay         for (i=imark; i<nzB; i++) v_p[nzA+i]   = vworkB[i];
1405acdf5bf4SSatish Balay       }
1406acdf5bf4SSatish Balay       if (idx) {
1407acdf5bf4SSatish Balay         *idx = idx_p = mat->rowindices;
1408acdf5bf4SSatish Balay         if (imark > -1) {
1409acdf5bf4SSatish Balay           for (i=0; i<imark; i++) {
1410bd16c2feSSatish Balay             idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs;
1411acdf5bf4SSatish Balay           }
1412acdf5bf4SSatish Balay         } else {
1413acdf5bf4SSatish Balay           for (i=0; i<nzB; i++) {
1414d9d09a02SSatish Balay             if (cmap[cworkB[i]/bs] < cstart)
1415d9d09a02SSatish Balay               idx_p[i] = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1416acdf5bf4SSatish Balay             else break;
1417acdf5bf4SSatish Balay           }
1418acdf5bf4SSatish Balay           imark = i;
1419acdf5bf4SSatish Balay         }
1420d9d09a02SSatish Balay         for (i=0; i<nzA; i++)     idx_p[imark+i] = cstart*bs + cworkA[i];
1421d9d09a02SSatish Balay         for (i=imark; i<nzB; i++) idx_p[nzA+i]   = cmap[cworkB[i]/bs]*bs + cworkB[i]%bs ;
1422acdf5bf4SSatish Balay       }
1423d64ed03dSBarry Smith     } else {
1424d212a18eSSatish Balay       if (idx) *idx = 0;
1425d212a18eSSatish Balay       if (v)   *v   = 0;
1426d212a18eSSatish Balay     }
1427acdf5bf4SSatish Balay   }
1428acdf5bf4SSatish Balay   *nz = nztot;
1429f830108cSBarry Smith   ierr = (*mat->A->ops->restorerow)(mat->A,lrow,&nzA,pcA,pvA);CHKERRQ(ierr);
1430f830108cSBarry Smith   ierr = (*mat->B->ops->restorerow)(mat->B,lrow,&nzB,pcB,pvB);CHKERRQ(ierr);
14313a40ed3dSBarry Smith   PetscFunctionReturn(0);
1432acdf5bf4SSatish Balay }
1433acdf5bf4SSatish Balay 
14344a2ae208SSatish Balay #undef __FUNCT__
14354a2ae208SSatish Balay #define __FUNCT__ "MatRestoreRow_MPIBAIJ"
1436acdf5bf4SSatish Balay int MatRestoreRow_MPIBAIJ(Mat mat,int row,int *nz,int **idx,Scalar **v)
1437acdf5bf4SSatish Balay {
1438acdf5bf4SSatish Balay   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;
1439d64ed03dSBarry Smith 
1440d64ed03dSBarry Smith   PetscFunctionBegin;
1441acdf5bf4SSatish Balay   if (baij->getrowactive == PETSC_FALSE) {
144229bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"MatGetRow not called");
1443acdf5bf4SSatish Balay   }
1444acdf5bf4SSatish Balay   baij->getrowactive = PETSC_FALSE;
14453a40ed3dSBarry Smith   PetscFunctionReturn(0);
1446acdf5bf4SSatish Balay }
1447acdf5bf4SSatish Balay 
14484a2ae208SSatish Balay #undef __FUNCT__
14494a2ae208SSatish Balay #define __FUNCT__ "MatGetBlockSize_MPIBAIJ"
1450ec1ea8d8SLois Curfman McInnes int MatGetBlockSize_MPIBAIJ(Mat mat,int *bs)
14515a838052SSatish Balay {
14525a838052SSatish Balay   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;
1453d64ed03dSBarry Smith 
1454d64ed03dSBarry Smith   PetscFunctionBegin;
14555a838052SSatish Balay   *bs = baij->bs;
14563a40ed3dSBarry Smith   PetscFunctionReturn(0);
14575a838052SSatish Balay }
14585a838052SSatish Balay 
14594a2ae208SSatish Balay #undef __FUNCT__
14604a2ae208SSatish Balay #define __FUNCT__ "MatZeroEntries_MPIBAIJ"
1461ec1ea8d8SLois Curfman McInnes int MatZeroEntries_MPIBAIJ(Mat A)
146258667388SSatish Balay {
146358667388SSatish Balay   Mat_MPIBAIJ *l = (Mat_MPIBAIJ*)A->data;
146458667388SSatish Balay   int         ierr;
1465d64ed03dSBarry Smith 
1466d64ed03dSBarry Smith   PetscFunctionBegin;
146758667388SSatish Balay   ierr = MatZeroEntries(l->A);CHKERRQ(ierr);
146858667388SSatish Balay   ierr = MatZeroEntries(l->B);CHKERRQ(ierr);
14693a40ed3dSBarry Smith   PetscFunctionReturn(0);
147058667388SSatish Balay }
14710ac07820SSatish Balay 
14724a2ae208SSatish Balay #undef __FUNCT__
14734a2ae208SSatish Balay #define __FUNCT__ "MatGetInfo_MPIBAIJ"
1474ec1ea8d8SLois Curfman McInnes int MatGetInfo_MPIBAIJ(Mat matin,MatInfoType flag,MatInfo *info)
14750ac07820SSatish Balay {
14764e220ebcSLois Curfman McInnes   Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)matin->data;
14774e220ebcSLois Curfman McInnes   Mat         A = a->A,B = a->B;
14787d57db60SLois Curfman McInnes   int         ierr;
1479329f5518SBarry Smith   PetscReal   isend[5],irecv[5];
14800ac07820SSatish Balay 
1481d64ed03dSBarry Smith   PetscFunctionBegin;
14824e220ebcSLois Curfman McInnes   info->block_size     = (double)a->bs;
14834e220ebcSLois Curfman McInnes   ierr = MatGetInfo(A,MAT_LOCAL,info);CHKERRQ(ierr);
14840e4b21beSBarry Smith   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
1485de87f314SBarry Smith   isend[3] = info->memory;  isend[4] = info->mallocs;
14864e220ebcSLois Curfman McInnes   ierr = MatGetInfo(B,MAT_LOCAL,info);CHKERRQ(ierr);
14870e4b21beSBarry Smith   isend[0] += info->nz_used; isend[1] += info->nz_allocated; isend[2] += info->nz_unneeded;
1488de87f314SBarry Smith   isend[3] += info->memory;  isend[4] += info->mallocs;
14890ac07820SSatish Balay   if (flag == MAT_LOCAL) {
14904e220ebcSLois Curfman McInnes     info->nz_used      = isend[0];
14914e220ebcSLois Curfman McInnes     info->nz_allocated = isend[1];
14924e220ebcSLois Curfman McInnes     info->nz_unneeded  = isend[2];
14934e220ebcSLois Curfman McInnes     info->memory       = isend[3];
14944e220ebcSLois Curfman McInnes     info->mallocs      = isend[4];
14950ac07820SSatish Balay   } else if (flag == MAT_GLOBAL_MAX) {
1496f7cdd7c9SBarry Smith     ierr = MPI_Allreduce(isend,irecv,5,MPI_DOUBLE,MPI_MAX,matin->comm);CHKERRQ(ierr);
14974e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
14984e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
14994e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
15004e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
15014e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
15020ac07820SSatish Balay   } else if (flag == MAT_GLOBAL_SUM) {
1503f7cdd7c9SBarry Smith     ierr = MPI_Allreduce(isend,irecv,5,MPI_DOUBLE,MPI_SUM,matin->comm);CHKERRQ(ierr);
15044e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
15054e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
15064e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
15074e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
15084e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
1509d41123aaSBarry Smith   } else {
151029bbc08cSBarry Smith     SETERRQ1(1,"Unknown MatInfoType argument %d",flag);
15110ac07820SSatish Balay   }
1512273d9f13SBarry Smith   info->rows_global       = (double)A->M;
1513273d9f13SBarry Smith   info->columns_global    = (double)A->N;
1514273d9f13SBarry Smith   info->rows_local        = (double)A->m;
1515273d9f13SBarry Smith   info->columns_local     = (double)A->N;
15164e220ebcSLois Curfman McInnes   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
15174e220ebcSLois Curfman McInnes   info->fill_ratio_needed = 0;
15184e220ebcSLois Curfman McInnes   info->factor_mallocs    = 0;
15193a40ed3dSBarry Smith   PetscFunctionReturn(0);
15200ac07820SSatish Balay }
15210ac07820SSatish Balay 
15224a2ae208SSatish Balay #undef __FUNCT__
15234a2ae208SSatish Balay #define __FUNCT__ "MatSetOption_MPIBAIJ"
1524ec1ea8d8SLois Curfman McInnes int MatSetOption_MPIBAIJ(Mat A,MatOption op)
152558667388SSatish Balay {
152658667388SSatish Balay   Mat_MPIBAIJ *a = (Mat_MPIBAIJ*)A->data;
152798305bb5SBarry Smith   int         ierr;
152858667388SSatish Balay 
1529d64ed03dSBarry Smith   PetscFunctionBegin;
153012c028f9SKris Buschelman   switch (op) {
153112c028f9SKris Buschelman   case MAT_NO_NEW_NONZERO_LOCATIONS:
153212c028f9SKris Buschelman   case MAT_YES_NEW_NONZERO_LOCATIONS:
153312c028f9SKris Buschelman   case MAT_COLUMNS_UNSORTED:
153412c028f9SKris Buschelman   case MAT_COLUMNS_SORTED:
153512c028f9SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
153612c028f9SKris Buschelman   case MAT_KEEP_ZEROED_ROWS:
153712c028f9SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
153898305bb5SBarry Smith     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
153998305bb5SBarry Smith     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
154012c028f9SKris Buschelman     break;
154112c028f9SKris Buschelman   case MAT_ROW_ORIENTED:
15427c922b88SBarry Smith     a->roworiented = PETSC_TRUE;
154398305bb5SBarry Smith     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
154498305bb5SBarry Smith     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
154512c028f9SKris Buschelman     break;
154612c028f9SKris Buschelman   case MAT_ROWS_SORTED:
154712c028f9SKris Buschelman   case MAT_ROWS_UNSORTED:
154812c028f9SKris Buschelman   case MAT_YES_NEW_DIAGONALS:
154912c028f9SKris Buschelman   case MAT_USE_HASH_TABLE:
1550*d03495bdSKris Buschelman   case MAT_USE_SINGLE_PRECISION_SOLVES:
1551b0a32e0cSBarry Smith     PetscLogInfo(A,"Info:MatSetOption_MPIBAIJ:Option ignored\n");
155212c028f9SKris Buschelman     break;
155312c028f9SKris Buschelman   case MAT_COLUMN_ORIENTED:
15547c922b88SBarry Smith     a->roworiented = PETSC_FALSE;
155598305bb5SBarry Smith     ierr = MatSetOption(a->A,op);CHKERRQ(ierr);
155698305bb5SBarry Smith     ierr = MatSetOption(a->B,op);CHKERRQ(ierr);
155712c028f9SKris Buschelman     break;
155812c028f9SKris Buschelman   case MAT_IGNORE_OFF_PROC_ENTRIES:
15597c922b88SBarry Smith     a->donotstash = PETSC_TRUE;
156012c028f9SKris Buschelman     break;
156112c028f9SKris Buschelman   case MAT_NO_NEW_DIAGONALS:
156229bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"MAT_NO_NEW_DIAGONALS");
156312c028f9SKris Buschelman     break;
156412c028f9SKris Buschelman   case MAT_USE_HASH_TABLE:
15657c922b88SBarry Smith     a->ht_flag = PETSC_TRUE;
156612c028f9SKris Buschelman     break;
156712c028f9SKris Buschelman   default:
156829bbc08cSBarry Smith     SETERRQ(PETSC_ERR_SUP,"unknown option");
156912c028f9SKris Buschelman     break;
1570d64ed03dSBarry Smith   }
15713a40ed3dSBarry Smith   PetscFunctionReturn(0);
157258667388SSatish Balay }
157358667388SSatish Balay 
15744a2ae208SSatish Balay #undef __FUNCT__
15754a2ae208SSatish Balay #define __FUNCT__ "MatTranspose_MPIBAIJ("
1576ec1ea8d8SLois Curfman McInnes int MatTranspose_MPIBAIJ(Mat A,Mat *matout)
15770ac07820SSatish Balay {
15780ac07820SSatish Balay   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)A->data;
15790ac07820SSatish Balay   Mat_SeqBAIJ *Aloc;
15800ac07820SSatish Balay   Mat         B;
1581273d9f13SBarry Smith   int         ierr,M=A->M,N=A->N,*ai,*aj,i,*rvals,j,k,col;
15820ac07820SSatish Balay   int         bs=baij->bs,mbs=baij->mbs;
15833eda8832SBarry Smith   MatScalar   *a;
15840ac07820SSatish Balay 
1585d64ed03dSBarry Smith   PetscFunctionBegin;
158629bbc08cSBarry Smith   if (!matout && M != N) SETERRQ(PETSC_ERR_ARG_SIZ,"Square matrix only for in-place");
1587273d9f13SBarry Smith   ierr = MatCreateMPIBAIJ(A->comm,baij->bs,A->n,A->m,N,M,0,PETSC_NULL,0,PETSC_NULL,&B);CHKERRQ(ierr);
15880ac07820SSatish Balay 
15890ac07820SSatish Balay   /* copy over the A part */
15900ac07820SSatish Balay   Aloc = (Mat_SeqBAIJ*)baij->A->data;
15910ac07820SSatish Balay   ai   = Aloc->i; aj = Aloc->j; a = Aloc->a;
159282502324SSatish Balay   ierr = PetscMalloc(bs*sizeof(int),&rvals);CHKERRQ(ierr);
15930ac07820SSatish Balay 
15940ac07820SSatish Balay   for (i=0; i<mbs; i++) {
15950ac07820SSatish Balay     rvals[0] = bs*(baij->rstart + i);
15960ac07820SSatish Balay     for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
15970ac07820SSatish Balay     for (j=ai[i]; j<ai[i+1]; j++) {
15980ac07820SSatish Balay       col = (baij->cstart+aj[j])*bs;
15990ac07820SSatish Balay       for (k=0; k<bs; k++) {
160093fea6afSBarry Smith         ierr = MatSetValues_MPIBAIJ_MatScalar(B,1,&col,bs,rvals,a,INSERT_VALUES);CHKERRQ(ierr);
16010ac07820SSatish Balay         col++; a += bs;
16020ac07820SSatish Balay       }
16030ac07820SSatish Balay     }
16040ac07820SSatish Balay   }
16050ac07820SSatish Balay   /* copy over the B part */
16060ac07820SSatish Balay   Aloc = (Mat_SeqBAIJ*)baij->B->data;
16070ac07820SSatish Balay   ai = Aloc->i; aj = Aloc->j; a = Aloc->a;
16080ac07820SSatish Balay   for (i=0; i<mbs; i++) {
16090ac07820SSatish Balay     rvals[0] = bs*(baij->rstart + i);
16100ac07820SSatish Balay     for (j=1; j<bs; j++) { rvals[j] = rvals[j-1] + 1; }
16110ac07820SSatish Balay     for (j=ai[i]; j<ai[i+1]; j++) {
16120ac07820SSatish Balay       col = baij->garray[aj[j]]*bs;
16130ac07820SSatish Balay       for (k=0; k<bs; k++) {
161493fea6afSBarry Smith         ierr = MatSetValues_MPIBAIJ_MatScalar(B,1,&col,bs,rvals,a,INSERT_VALUES);CHKERRQ(ierr);
16150ac07820SSatish Balay         col++; a += bs;
16160ac07820SSatish Balay       }
16170ac07820SSatish Balay     }
16180ac07820SSatish Balay   }
1619606d414cSSatish Balay   ierr = PetscFree(rvals);CHKERRQ(ierr);
16200ac07820SSatish Balay   ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
16210ac07820SSatish Balay   ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
16220ac07820SSatish Balay 
16237c922b88SBarry Smith   if (matout) {
16240ac07820SSatish Balay     *matout = B;
16250ac07820SSatish Balay   } else {
1626273d9f13SBarry Smith     ierr = MatHeaderCopy(A,B);CHKERRQ(ierr);
16270ac07820SSatish Balay   }
16283a40ed3dSBarry Smith   PetscFunctionReturn(0);
16290ac07820SSatish Balay }
16300e95ebc0SSatish Balay 
16314a2ae208SSatish Balay #undef __FUNCT__
16324a2ae208SSatish Balay #define __FUNCT__ "MatDiagonalScale_MPIBAIJ"
163336c4a09eSSatish Balay int MatDiagonalScale_MPIBAIJ(Mat mat,Vec ll,Vec rr)
16340e95ebc0SSatish Balay {
163536c4a09eSSatish Balay   Mat_MPIBAIJ *baij = (Mat_MPIBAIJ*)mat->data;
163636c4a09eSSatish Balay   Mat         a = baij->A,b = baij->B;
16370e95ebc0SSatish Balay   int         ierr,s1,s2,s3;
16380e95ebc0SSatish Balay 
1639d64ed03dSBarry Smith   PetscFunctionBegin;
164036c4a09eSSatish Balay   ierr = MatGetLocalSize(mat,&s2,&s3);CHKERRQ(ierr);
164136c4a09eSSatish Balay   if (rr) {
164236c4a09eSSatish Balay     ierr = VecGetLocalSize(rr,&s1);CHKERRQ(ierr);
164329bbc08cSBarry Smith     if (s1!=s3) SETERRQ(PETSC_ERR_ARG_SIZ,"right vector non-conforming local size");
164436c4a09eSSatish Balay     /* Overlap communication with computation. */
164536c4a09eSSatish Balay     ierr = VecScatterBegin(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
164636c4a09eSSatish Balay   }
16470e95ebc0SSatish Balay   if (ll) {
16480e95ebc0SSatish Balay     ierr = VecGetLocalSize(ll,&s1);CHKERRQ(ierr);
164929bbc08cSBarry Smith     if (s1!=s2) SETERRQ(PETSC_ERR_ARG_SIZ,"left vector non-conforming local size");
1650a21fb8cbSBarry Smith     ierr = (*b->ops->diagonalscale)(b,ll,PETSC_NULL);CHKERRQ(ierr);
16510e95ebc0SSatish Balay   }
165236c4a09eSSatish Balay   /* scale  the diagonal block */
165336c4a09eSSatish Balay   ierr = (*a->ops->diagonalscale)(a,ll,rr);CHKERRQ(ierr);
165436c4a09eSSatish Balay 
165536c4a09eSSatish Balay   if (rr) {
165636c4a09eSSatish Balay     /* Do a scatter end and then right scale the off-diagonal block */
165736c4a09eSSatish Balay     ierr = VecScatterEnd(rr,baij->lvec,INSERT_VALUES,SCATTER_FORWARD,baij->Mvctx);CHKERRQ(ierr);
1658a21fb8cbSBarry Smith     ierr = (*b->ops->diagonalscale)(b,PETSC_NULL,baij->lvec);CHKERRQ(ierr);
165936c4a09eSSatish Balay   }
166036c4a09eSSatish Balay 
16613a40ed3dSBarry Smith   PetscFunctionReturn(0);
16620e95ebc0SSatish Balay }
16630e95ebc0SSatish Balay 
16644a2ae208SSatish Balay #undef __FUNCT__
16654a2ae208SSatish Balay #define __FUNCT__ "MatZeroRows_MPIBAIJ"
1666ec1ea8d8SLois Curfman McInnes int MatZeroRows_MPIBAIJ(Mat A,IS is,Scalar *diag)
16670ac07820SSatish Balay {
16680ac07820SSatish Balay   Mat_MPIBAIJ    *l = (Mat_MPIBAIJ*)A->data;
16690ac07820SSatish Balay   int            i,ierr,N,*rows,*owners = l->rowners,size = l->size;
167035d8aa7fSBarry Smith   int            *procs,*nprocs,j,idx,nsends,*work,row;
16710ac07820SSatish Balay   int            nmax,*svalues,*starts,*owner,nrecvs,rank = l->rank;
16720ac07820SSatish Balay   int            *rvalues,tag = A->tag,count,base,slen,n,*source;
1673a07cd24cSSatish Balay   int            *lens,imdex,*lrows,*values,bs=l->bs,rstart_bs=l->rstart_bs;
16740ac07820SSatish Balay   MPI_Comm       comm = A->comm;
16750ac07820SSatish Balay   MPI_Request    *send_waits,*recv_waits;
16760ac07820SSatish Balay   MPI_Status     recv_status,*send_status;
16770ac07820SSatish Balay   IS             istmp;
167835d8aa7fSBarry Smith   PetscTruth     found;
16790ac07820SSatish Balay 
1680d64ed03dSBarry Smith   PetscFunctionBegin;
1681f14a1c24SBarry Smith   ierr = ISGetLocalSize(is,&N);CHKERRQ(ierr);
16820ac07820SSatish Balay   ierr = ISGetIndices(is,&rows);CHKERRQ(ierr);
16830ac07820SSatish Balay 
16840ac07820SSatish Balay   /*  first count number of contributors to each processor */
168582502324SSatish Balay   ierr  = PetscMalloc(2*size*sizeof(int),&nprocs);CHKERRQ(ierr);
1686549d3d68SSatish Balay   ierr  = PetscMemzero(nprocs,2*size*sizeof(int));CHKERRQ(ierr);
1687549d3d68SSatish Balay   procs = nprocs + size;
1688b0a32e0cSBarry Smith   ierr  = PetscMalloc((N+1)*sizeof(int),&owner);CHKERRQ(ierr); /* see note*/
16890ac07820SSatish Balay   for (i=0; i<N; i++) {
16900ac07820SSatish Balay     idx   = rows[i];
169135d8aa7fSBarry Smith     found = PETSC_FALSE;
16920ac07820SSatish Balay     for (j=0; j<size; j++) {
16930ac07820SSatish Balay       if (idx >= owners[j]*bs && idx < owners[j+1]*bs) {
169435d8aa7fSBarry Smith         nprocs[j]++; procs[j] = 1; owner[i] = j; found = PETSC_TRUE; break;
16950ac07820SSatish Balay       }
16960ac07820SSatish Balay     }
169729bbc08cSBarry Smith     if (!found) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Index out of range");
16980ac07820SSatish Balay   }
16990ac07820SSatish Balay   nsends = 0;  for (i=0; i<size; i++) { nsends += procs[i];}
17000ac07820SSatish Balay 
17010ac07820SSatish Balay   /* inform other processors of number of messages and max length*/
170282502324SSatish Balay   ierr   = PetscMalloc(2*size*sizeof(int),&work);CHKERRQ(ierr);
17036831982aSBarry Smith   ierr   = MPI_Allreduce(nprocs,work,2*size,MPI_INT,PetscMaxSum_Op,comm);CHKERRQ(ierr);
17040ac07820SSatish Balay   nmax   = work[rank];
17056831982aSBarry Smith   nrecvs = work[size+rank];
1706606d414cSSatish Balay   ierr   = PetscFree(work);CHKERRQ(ierr);
17070ac07820SSatish Balay 
17080ac07820SSatish Balay   /* post receives:   */
1709b0a32e0cSBarry Smith   ierr = PetscMalloc((nrecvs+1)*(nmax+1)*sizeof(int),&rvalues);CHKERRQ(ierr);
1710b0a32e0cSBarry Smith   ierr = PetscMalloc((nrecvs+1)*sizeof(MPI_Request),&recv_waits);CHKERRQ(ierr);
17110ac07820SSatish Balay   for (i=0; i<nrecvs; i++) {
1712ca161407SBarry Smith     ierr = MPI_Irecv(rvalues+nmax*i,nmax,MPI_INT,MPI_ANY_SOURCE,tag,comm,recv_waits+i);CHKERRQ(ierr);
17130ac07820SSatish Balay   }
17140ac07820SSatish Balay 
17150ac07820SSatish Balay   /* do sends:
17160ac07820SSatish Balay      1) starts[i] gives the starting index in svalues for stuff going to
17170ac07820SSatish Balay      the ith processor
17180ac07820SSatish Balay   */
1719b0a32e0cSBarry Smith   ierr = PetscMalloc((N+1)*sizeof(int),&svalues);CHKERRQ(ierr);
1720b0a32e0cSBarry Smith   ierr = PetscMalloc((nsends+1)*sizeof(MPI_Request),&send_waits);CHKERRQ(ierr);
1721b0a32e0cSBarry Smith   ierr = PetscMalloc((size+1)*sizeof(int),&starts);CHKERRQ(ierr);
17220ac07820SSatish Balay   starts[0]  = 0;
17230ac07820SSatish Balay   for (i=1; i<size; i++) { starts[i] = starts[i-1] + nprocs[i-1];}
17240ac07820SSatish Balay   for (i=0; i<N; i++) {
17250ac07820SSatish Balay     svalues[starts[owner[i]]++] = rows[i];
17260ac07820SSatish Balay   }
17276831982aSBarry Smith   ierr = ISRestoreIndices(is,&rows);CHKERRQ(ierr);
17280ac07820SSatish Balay 
17290ac07820SSatish Balay   starts[0] = 0;
17300ac07820SSatish Balay   for (i=1; i<size+1; i++) { starts[i] = starts[i-1] + nprocs[i-1];}
17310ac07820SSatish Balay   count = 0;
17320ac07820SSatish Balay   for (i=0; i<size; i++) {
17330ac07820SSatish Balay     if (procs[i]) {
1734ca161407SBarry Smith       ierr = MPI_Isend(svalues+starts[i],nprocs[i],MPI_INT,i,tag,comm,send_waits+count++);CHKERRQ(ierr);
17350ac07820SSatish Balay     }
17360ac07820SSatish Balay   }
1737606d414cSSatish Balay   ierr = PetscFree(starts);CHKERRQ(ierr);
17380ac07820SSatish Balay 
17390ac07820SSatish Balay   base = owners[rank]*bs;
17400ac07820SSatish Balay 
17410ac07820SSatish Balay   /*  wait on receives */
1742b0a32e0cSBarry Smith   ierr   = PetscMalloc(2*(nrecvs+1)*sizeof(int),&lens);CHKERRQ(ierr);
17430ac07820SSatish Balay   source = lens + nrecvs;
17440ac07820SSatish Balay   count  = nrecvs; slen = 0;
17450ac07820SSatish Balay   while (count) {
1746ca161407SBarry Smith     ierr = MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);CHKERRQ(ierr);
17470ac07820SSatish Balay     /* unpack receives into our local space */
1748ca161407SBarry Smith     ierr = MPI_Get_count(&recv_status,MPI_INT,&n);CHKERRQ(ierr);
17490ac07820SSatish Balay     source[imdex]  = recv_status.MPI_SOURCE;
17500ac07820SSatish Balay     lens[imdex]    = n;
17510ac07820SSatish Balay     slen          += n;
17520ac07820SSatish Balay     count--;
17530ac07820SSatish Balay   }
1754606d414cSSatish Balay   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
17550ac07820SSatish Balay 
17560ac07820SSatish Balay   /* move the data into the send scatter */
1757b0a32e0cSBarry Smith   ierr = PetscMalloc((slen+1)*sizeof(int),&lrows);CHKERRQ(ierr);
17580ac07820SSatish Balay   count = 0;
17590ac07820SSatish Balay   for (i=0; i<nrecvs; i++) {
17600ac07820SSatish Balay     values = rvalues + i*nmax;
17610ac07820SSatish Balay     for (j=0; j<lens[i]; j++) {
17620ac07820SSatish Balay       lrows[count++] = values[j] - base;
17630ac07820SSatish Balay     }
17640ac07820SSatish Balay   }
1765606d414cSSatish Balay   ierr = PetscFree(rvalues);CHKERRQ(ierr);
1766606d414cSSatish Balay   ierr = PetscFree(lens);CHKERRQ(ierr);
1767606d414cSSatish Balay   ierr = PetscFree(owner);CHKERRQ(ierr);
1768606d414cSSatish Balay   ierr = PetscFree(nprocs);CHKERRQ(ierr);
17690ac07820SSatish Balay 
17700ac07820SSatish Balay   /* actually zap the local rows */
1771029af93fSBarry Smith   ierr = ISCreateGeneral(PETSC_COMM_SELF,slen,lrows,&istmp);CHKERRQ(ierr);
1772b0a32e0cSBarry Smith   PetscLogObjectParent(A,istmp);
1773a07cd24cSSatish Balay 
177472dacd9aSBarry Smith   /*
177572dacd9aSBarry Smith         Zero the required rows. If the "diagonal block" of the matrix
177672dacd9aSBarry Smith      is square and the user wishes to set the diagonal we use seperate
177772dacd9aSBarry Smith      code so that MatSetValues() is not called for each diagonal allocating
177872dacd9aSBarry Smith      new memory, thus calling lots of mallocs and slowing things down.
177972dacd9aSBarry Smith 
178072dacd9aSBarry Smith        Contributed by: Mathew Knepley
178172dacd9aSBarry Smith   */
17829c957beeSSatish Balay   /* must zero l->B before l->A because the (diag) case below may put values into l->B*/
17836fa18ffdSBarry Smith   ierr = MatZeroRows_SeqBAIJ(l->B,istmp,0);CHKERRQ(ierr);
17849c957beeSSatish Balay   if (diag && (l->A->M == l->A->N)) {
17856fa18ffdSBarry Smith     ierr = MatZeroRows_SeqBAIJ(l->A,istmp,diag);CHKERRQ(ierr);
17869c957beeSSatish Balay   } else if (diag) {
17876fa18ffdSBarry Smith     ierr = MatZeroRows_SeqBAIJ(l->A,istmp,0);CHKERRQ(ierr);
1788fa46199cSSatish Balay     if (((Mat_SeqBAIJ*)l->A->data)->nonew) {
178929bbc08cSBarry Smith       SETERRQ(PETSC_ERR_SUP,"MatZeroRows() on rectangular matrices cannot be used with the Mat options \n\
1790fa46199cSSatish Balay MAT_NO_NEW_NONZERO_LOCATIONS,MAT_NEW_NONZERO_LOCATION_ERR,MAT_NEW_NONZERO_ALLOCATION_ERR");
17916525c446SSatish Balay     }
1792a07cd24cSSatish Balay     for (i=0; i<slen; i++) {
1793a07cd24cSSatish Balay       row  = lrows[i] + rstart_bs;
17943f11ea53SBarry Smith       ierr = MatSetValues(A,1,&row,1,&row,diag,INSERT_VALUES);CHKERRQ(ierr);
1795a07cd24cSSatish Balay     }
1796a07cd24cSSatish Balay     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1797a07cd24cSSatish Balay     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
17989c957beeSSatish Balay   } else {
17996fa18ffdSBarry Smith     ierr = MatZeroRows_SeqBAIJ(l->A,istmp,0);CHKERRQ(ierr);
1800a07cd24cSSatish Balay   }
18019c957beeSSatish Balay 
18029c957beeSSatish Balay   ierr = ISDestroy(istmp);CHKERRQ(ierr);
1803606d414cSSatish Balay   ierr = PetscFree(lrows);CHKERRQ(ierr);
1804a07cd24cSSatish Balay 
18050ac07820SSatish Balay   /* wait on sends */
18060ac07820SSatish Balay   if (nsends) {
180782502324SSatish Balay     ierr = PetscMalloc(nsends*sizeof(MPI_Status),&send_status);CHKERRQ(ierr);
1808ca161407SBarry Smith     ierr = MPI_Waitall(nsends,send_waits,send_status);CHKERRQ(ierr);
1809606d414cSSatish Balay     ierr = PetscFree(send_status);CHKERRQ(ierr);
18100ac07820SSatish Balay   }
1811606d414cSSatish Balay   ierr = PetscFree(send_waits);CHKERRQ(ierr);
1812606d414cSSatish Balay   ierr = PetscFree(svalues);CHKERRQ(ierr);
18130ac07820SSatish Balay 
18143a40ed3dSBarry Smith   PetscFunctionReturn(0);
18150ac07820SSatish Balay }
181672dacd9aSBarry Smith 
18174a2ae208SSatish Balay #undef __FUNCT__
18184a2ae208SSatish Balay #define __FUNCT__ "MatPrintHelp_MPIBAIJ"
1819ec1ea8d8SLois Curfman McInnes int MatPrintHelp_MPIBAIJ(Mat A)
1820ba4ca20aSSatish Balay {
1821ba4ca20aSSatish Balay   Mat_MPIBAIJ *a   = (Mat_MPIBAIJ*)A->data;
182225fdafccSSatish Balay   MPI_Comm    comm = A->comm;
1823133cdb44SSatish Balay   static int  called = 0;
18243a40ed3dSBarry Smith   int         ierr;
1825ba4ca20aSSatish Balay 
1826d64ed03dSBarry Smith   PetscFunctionBegin;
18273a40ed3dSBarry Smith   if (!a->rank) {
18283a40ed3dSBarry Smith     ierr = MatPrintHelp_SeqBAIJ(a->A);CHKERRQ(ierr);
182925fdafccSSatish Balay   }
183025fdafccSSatish Balay   if (called) {PetscFunctionReturn(0);} else called = 1;
1831d132466eSBarry Smith   ierr = (*PetscHelpPrintf)(comm," Options for MATMPIBAIJ matrix format (the defaults):\n");CHKERRQ(ierr);
1832d132466eSBarry Smith   ierr = (*PetscHelpPrintf)(comm,"  -mat_use_hash_table <factor>: Use hashtable for efficient matrix assembly\n");CHKERRQ(ierr);
18333a40ed3dSBarry Smith   PetscFunctionReturn(0);
1834ba4ca20aSSatish Balay }
18350ac07820SSatish Balay 
18364a2ae208SSatish Balay #undef __FUNCT__
18374a2ae208SSatish Balay #define __FUNCT__ "MatSetUnfactored_MPIBAIJ"
1838ec1ea8d8SLois Curfman McInnes int MatSetUnfactored_MPIBAIJ(Mat A)
1839bb5a7306SBarry Smith {
1840bb5a7306SBarry Smith   Mat_MPIBAIJ *a   = (Mat_MPIBAIJ*)A->data;
1841bb5a7306SBarry Smith   int         ierr;
1842d64ed03dSBarry Smith 
1843d64ed03dSBarry Smith   PetscFunctionBegin;
1844bb5a7306SBarry Smith   ierr = MatSetUnfactored(a->A);CHKERRQ(ierr);
18453a40ed3dSBarry Smith   PetscFunctionReturn(0);
1846bb5a7306SBarry Smith }
1847bb5a7306SBarry Smith 
18482e8a6d31SBarry Smith static int MatDuplicate_MPIBAIJ(Mat,MatDuplicateOption,Mat *);
18490ac07820SSatish Balay 
18504a2ae208SSatish Balay #undef __FUNCT__
18514a2ae208SSatish Balay #define __FUNCT__ "MatEqual_MPIBAIJ"
18527fc3c18eSBarry Smith int MatEqual_MPIBAIJ(Mat A,Mat B,PetscTruth *flag)
18537fc3c18eSBarry Smith {
18547fc3c18eSBarry Smith   Mat_MPIBAIJ *matB = (Mat_MPIBAIJ*)B->data,*matA = (Mat_MPIBAIJ*)A->data;
18557fc3c18eSBarry Smith   Mat         a,b,c,d;
18567fc3c18eSBarry Smith   PetscTruth  flg;
18577fc3c18eSBarry Smith   int         ierr;
18587fc3c18eSBarry Smith 
18597fc3c18eSBarry Smith   PetscFunctionBegin;
1860273d9f13SBarry Smith   ierr = PetscTypeCompare((PetscObject)B,MATMPIBAIJ,&flg);CHKERRQ(ierr);
1861273d9f13SBarry Smith   if (!flg) SETERRQ(PETSC_ERR_ARG_INCOMP,"Matrices must be same type");
18627fc3c18eSBarry Smith   a = matA->A; b = matA->B;
18637fc3c18eSBarry Smith   c = matB->A; d = matB->B;
18647fc3c18eSBarry Smith 
18657fc3c18eSBarry Smith   ierr = MatEqual(a,c,&flg);CHKERRQ(ierr);
18667fc3c18eSBarry Smith   if (flg == PETSC_TRUE) {
18677fc3c18eSBarry Smith     ierr = MatEqual(b,d,&flg);CHKERRQ(ierr);
18687fc3c18eSBarry Smith   }
18697fc3c18eSBarry Smith   ierr = MPI_Allreduce(&flg,flag,1,MPI_INT,MPI_LAND,A->comm);CHKERRQ(ierr);
18707fc3c18eSBarry Smith   PetscFunctionReturn(0);
18717fc3c18eSBarry Smith }
18727fc3c18eSBarry Smith 
1873273d9f13SBarry Smith 
18744a2ae208SSatish Balay #undef __FUNCT__
18754a2ae208SSatish Balay #define __FUNCT__ "MatSetUpPreallocation_MPIBAIJ"
1876273d9f13SBarry Smith int MatSetUpPreallocation_MPIBAIJ(Mat A)
1877273d9f13SBarry Smith {
1878273d9f13SBarry Smith   int        ierr;
1879273d9f13SBarry Smith 
1880273d9f13SBarry Smith   PetscFunctionBegin;
1881273d9f13SBarry Smith   ierr =  MatMPIBAIJSetPreallocation(A,1,PETSC_DEFAULT,0,PETSC_DEFAULT,0);CHKERRQ(ierr);
1882273d9f13SBarry Smith   PetscFunctionReturn(0);
1883273d9f13SBarry Smith }
1884273d9f13SBarry Smith 
188579bdfe76SSatish Balay /* -------------------------------------------------------------------*/
1886cc2dc46cSBarry Smith static struct _MatOps MatOps_Values = {
1887cc2dc46cSBarry Smith   MatSetValues_MPIBAIJ,
1888cc2dc46cSBarry Smith   MatGetRow_MPIBAIJ,
1889cc2dc46cSBarry Smith   MatRestoreRow_MPIBAIJ,
1890cc2dc46cSBarry Smith   MatMult_MPIBAIJ,
1891cc2dc46cSBarry Smith   MatMultAdd_MPIBAIJ,
18927c922b88SBarry Smith   MatMultTranspose_MPIBAIJ,
18937c922b88SBarry Smith   MatMultTransposeAdd_MPIBAIJ,
1894cc2dc46cSBarry Smith   0,
1895cc2dc46cSBarry Smith   0,
1896cc2dc46cSBarry Smith   0,
1897cc2dc46cSBarry Smith   0,
1898cc2dc46cSBarry Smith   0,
1899cc2dc46cSBarry Smith   0,
1900cc2dc46cSBarry Smith   0,
1901cc2dc46cSBarry Smith   MatTranspose_MPIBAIJ,
1902cc2dc46cSBarry Smith   MatGetInfo_MPIBAIJ,
19037fc3c18eSBarry Smith   MatEqual_MPIBAIJ,
1904cc2dc46cSBarry Smith   MatGetDiagonal_MPIBAIJ,
1905cc2dc46cSBarry Smith   MatDiagonalScale_MPIBAIJ,
1906cc2dc46cSBarry Smith   MatNorm_MPIBAIJ,
1907cc2dc46cSBarry Smith   MatAssemblyBegin_MPIBAIJ,
1908cc2dc46cSBarry Smith   MatAssemblyEnd_MPIBAIJ,
1909cc2dc46cSBarry Smith   0,
1910cc2dc46cSBarry Smith   MatSetOption_MPIBAIJ,
1911cc2dc46cSBarry Smith   MatZeroEntries_MPIBAIJ,
1912cc2dc46cSBarry Smith   MatZeroRows_MPIBAIJ,
1913cc2dc46cSBarry Smith   0,
1914cc2dc46cSBarry Smith   0,
1915cc2dc46cSBarry Smith   0,
1916cc2dc46cSBarry Smith   0,
1917273d9f13SBarry Smith   MatSetUpPreallocation_MPIBAIJ,
1918273d9f13SBarry Smith   0,
1919cc2dc46cSBarry Smith   MatGetOwnershipRange_MPIBAIJ,
1920cc2dc46cSBarry Smith   0,
1921cc2dc46cSBarry Smith   0,
1922cc2dc46cSBarry Smith   0,
1923cc2dc46cSBarry Smith   0,
19242e8a6d31SBarry Smith   MatDuplicate_MPIBAIJ,
1925cc2dc46cSBarry Smith   0,
1926cc2dc46cSBarry Smith   0,
1927cc2dc46cSBarry Smith   0,
1928cc2dc46cSBarry Smith   0,
1929cc2dc46cSBarry Smith   0,
1930cc2dc46cSBarry Smith   MatGetSubMatrices_MPIBAIJ,
1931cc2dc46cSBarry Smith   MatIncreaseOverlap_MPIBAIJ,
1932cc2dc46cSBarry Smith   MatGetValues_MPIBAIJ,
1933cc2dc46cSBarry Smith   0,
1934cc2dc46cSBarry Smith   MatPrintHelp_MPIBAIJ,
1935cc2dc46cSBarry Smith   MatScale_MPIBAIJ,
1936cc2dc46cSBarry Smith   0,
1937cc2dc46cSBarry Smith   0,
1938cc2dc46cSBarry Smith   0,
1939cc2dc46cSBarry Smith   MatGetBlockSize_MPIBAIJ,
1940cc2dc46cSBarry Smith   0,
1941cc2dc46cSBarry Smith   0,
1942cc2dc46cSBarry Smith   0,
1943cc2dc46cSBarry Smith   0,
1944cc2dc46cSBarry Smith   0,
1945cc2dc46cSBarry Smith   0,
1946cc2dc46cSBarry Smith   MatSetUnfactored_MPIBAIJ,
1947cc2dc46cSBarry Smith   0,
1948cc2dc46cSBarry Smith   MatSetValuesBlocked_MPIBAIJ,
1949cc2dc46cSBarry Smith   0,
1950f14a1c24SBarry Smith   MatDestroy_MPIBAIJ,
1951f14a1c24SBarry Smith   MatView_MPIBAIJ,
19527843d17aSBarry Smith   MatGetMaps_Petsc,
19537843d17aSBarry Smith   0,
19547843d17aSBarry Smith   0,
19557843d17aSBarry Smith   0,
19567843d17aSBarry Smith   0,
19577843d17aSBarry Smith   0,
19587843d17aSBarry Smith   0,
19597843d17aSBarry Smith   MatGetRowMax_MPIBAIJ};
196079bdfe76SSatish Balay 
19615ef9f2a5SBarry Smith 
1962e18c124aSSatish Balay EXTERN_C_BEGIN
19634a2ae208SSatish Balay #undef __FUNCT__
19644a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonalBlock_MPIBAIJ"
19655ef9f2a5SBarry Smith int MatGetDiagonalBlock_MPIBAIJ(Mat A,PetscTruth *iscopy,MatReuse reuse,Mat *a)
19665ef9f2a5SBarry Smith {
19675ef9f2a5SBarry Smith   PetscFunctionBegin;
19685ef9f2a5SBarry Smith   *a      = ((Mat_MPIBAIJ *)A->data)->A;
19695ef9f2a5SBarry Smith   *iscopy = PETSC_FALSE;
19705ef9f2a5SBarry Smith   PetscFunctionReturn(0);
19715ef9f2a5SBarry Smith }
1972e18c124aSSatish Balay EXTERN_C_END
197379bdfe76SSatish Balay 
1974273d9f13SBarry Smith EXTERN_C_BEGIN
19754a2ae208SSatish Balay #undef __FUNCT__
19764a2ae208SSatish Balay #define __FUNCT__ "MatCreate_MPIBAIJ"
1977273d9f13SBarry Smith int MatCreate_MPIBAIJ(Mat B)
1978273d9f13SBarry Smith {
1979273d9f13SBarry Smith   Mat_MPIBAIJ  *b;
1980cfce73b9SSatish Balay   int          ierr;
1981273d9f13SBarry Smith   PetscTruth   flg;
1982273d9f13SBarry Smith 
1983273d9f13SBarry Smith   PetscFunctionBegin;
1984273d9f13SBarry Smith 
198582502324SSatish Balay   ierr = PetscNew(Mat_MPIBAIJ,&b);CHKERRQ(ierr);
198682502324SSatish Balay   B->data = (void*)b;
198782502324SSatish Balay 
1988273d9f13SBarry Smith   ierr    = PetscMemzero(b,sizeof(Mat_MPIBAIJ));CHKERRQ(ierr);
1989273d9f13SBarry Smith   ierr    = PetscMemcpy(B->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1990273d9f13SBarry Smith   B->mapping    = 0;
1991273d9f13SBarry Smith   B->factor     = 0;
1992273d9f13SBarry Smith   B->assembled  = PETSC_FALSE;
1993273d9f13SBarry Smith 
1994273d9f13SBarry Smith   B->insertmode = NOT_SET_VALUES;
1995273d9f13SBarry Smith   ierr = MPI_Comm_rank(B->comm,&b->rank);CHKERRQ(ierr);
1996273d9f13SBarry Smith   ierr = MPI_Comm_size(B->comm,&b->size);CHKERRQ(ierr);
1997273d9f13SBarry Smith 
1998273d9f13SBarry Smith   /* build local table of row and column ownerships */
199982502324SSatish Balay   ierr          = PetscMalloc(3*(b->size+2)*sizeof(int),&b->rowners);CHKERRQ(ierr);
2000b0a32e0cSBarry Smith   PetscLogObjectMemory(B,3*(b->size+2)*sizeof(int)+sizeof(struct _p_Mat)+sizeof(Mat_MPIBAIJ));
2001273d9f13SBarry Smith   b->cowners    = b->rowners + b->size + 2;
2002273d9f13SBarry Smith   b->rowners_bs = b->cowners + b->size + 2;
2003273d9f13SBarry Smith 
2004273d9f13SBarry Smith   /* build cache for off array entries formed */
2005273d9f13SBarry Smith   ierr = MatStashCreate_Private(B->comm,1,&B->stash);CHKERRQ(ierr);
2006273d9f13SBarry Smith   b->donotstash  = PETSC_FALSE;
2007273d9f13SBarry Smith   b->colmap      = PETSC_NULL;
2008273d9f13SBarry Smith   b->garray      = PETSC_NULL;
2009273d9f13SBarry Smith   b->roworiented = PETSC_TRUE;
2010273d9f13SBarry Smith 
2011cfce73b9SSatish Balay #if defined(PETSC_USE_MAT_SINGLE)
2012273d9f13SBarry Smith   /* stuff for MatSetValues_XXX in single precision */
201364a35ccbSBarry Smith   b->setvalueslen     = 0;
2014273d9f13SBarry Smith   b->setvaluescopy    = PETSC_NULL;
2015273d9f13SBarry Smith #endif
2016273d9f13SBarry Smith 
2017273d9f13SBarry Smith   /* stuff used in block assembly */
2018273d9f13SBarry Smith   b->barray       = 0;
2019273d9f13SBarry Smith 
2020273d9f13SBarry Smith   /* stuff used for matrix vector multiply */
2021273d9f13SBarry Smith   b->lvec         = 0;
2022273d9f13SBarry Smith   b->Mvctx        = 0;
2023273d9f13SBarry Smith 
2024273d9f13SBarry Smith   /* stuff for MatGetRow() */
2025273d9f13SBarry Smith   b->rowindices   = 0;
2026273d9f13SBarry Smith   b->rowvalues    = 0;
2027273d9f13SBarry Smith   b->getrowactive = PETSC_FALSE;
2028273d9f13SBarry Smith 
2029273d9f13SBarry Smith   /* hash table stuff */
2030273d9f13SBarry Smith   b->ht           = 0;
2031273d9f13SBarry Smith   b->hd           = 0;
2032273d9f13SBarry Smith   b->ht_size      = 0;
2033273d9f13SBarry Smith   b->ht_flag      = PETSC_FALSE;
2034273d9f13SBarry Smith   b->ht_fact      = 0;
2035273d9f13SBarry Smith   b->ht_total_ct  = 0;
2036273d9f13SBarry Smith   b->ht_insert_ct = 0;
2037273d9f13SBarry Smith 
2038b0a32e0cSBarry Smith   ierr = PetscOptionsHasName(PETSC_NULL,"-mat_use_hash_table",&flg);CHKERRQ(ierr);
2039273d9f13SBarry Smith   if (flg) {
2040273d9f13SBarry Smith     double fact = 1.39;
2041273d9f13SBarry Smith     ierr = MatSetOption(B,MAT_USE_HASH_TABLE);CHKERRQ(ierr);
2042b0a32e0cSBarry Smith     ierr = PetscOptionsGetDouble(PETSC_NULL,"-mat_use_hash_table",&fact,PETSC_NULL);CHKERRQ(ierr);
2043273d9f13SBarry Smith     if (fact <= 1.0) fact = 1.39;
2044273d9f13SBarry Smith     ierr = MatMPIBAIJSetHashTableFactor(B,fact);CHKERRQ(ierr);
2045b0a32e0cSBarry Smith     PetscLogInfo(0,"MatCreateMPIBAIJ:Hash table Factor used %5.2f\n",fact);
2046273d9f13SBarry Smith   }
2047273d9f13SBarry Smith   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatStoreValues_C",
2048273d9f13SBarry Smith                                      "MatStoreValues_MPIBAIJ",
2049273d9f13SBarry Smith                                      MatStoreValues_MPIBAIJ);CHKERRQ(ierr);
2050273d9f13SBarry Smith   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatRetrieveValues_C",
2051273d9f13SBarry Smith                                      "MatRetrieveValues_MPIBAIJ",
2052273d9f13SBarry Smith                                      MatRetrieveValues_MPIBAIJ);CHKERRQ(ierr);
2053273d9f13SBarry Smith   ierr = PetscObjectComposeFunctionDynamic((PetscObject)B,"MatGetDiagonalBlock_C",
2054273d9f13SBarry Smith                                      "MatGetDiagonalBlock_MPIBAIJ",
2055273d9f13SBarry Smith                                      MatGetDiagonalBlock_MPIBAIJ);CHKERRQ(ierr);
2056273d9f13SBarry Smith   PetscFunctionReturn(0);
2057273d9f13SBarry Smith }
2058273d9f13SBarry Smith EXTERN_C_END
2059273d9f13SBarry Smith 
20604a2ae208SSatish Balay #undef __FUNCT__
20614a2ae208SSatish Balay #define __FUNCT__ "MatMPIBAIJSetPreallocation"
2062273d9f13SBarry Smith /*@C
2063273d9f13SBarry Smith    MatMPIBAIJSetPreallocation - Creates a sparse parallel matrix in block AIJ format
2064273d9f13SBarry Smith    (block compressed row).  For good matrix assembly performance
2065273d9f13SBarry Smith    the user should preallocate the matrix storage by setting the parameters
2066273d9f13SBarry Smith    d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
2067273d9f13SBarry Smith    performance can be increased by more than a factor of 50.
2068273d9f13SBarry Smith 
2069273d9f13SBarry Smith    Collective on Mat
2070273d9f13SBarry Smith 
2071273d9f13SBarry Smith    Input Parameters:
2072273d9f13SBarry Smith +  A - the matrix
2073273d9f13SBarry Smith .  bs   - size of blockk
2074273d9f13SBarry Smith .  d_nz  - number of block nonzeros per block row in diagonal portion of local
2075273d9f13SBarry Smith            submatrix  (same for all local rows)
2076273d9f13SBarry Smith .  d_nnz - array containing the number of block nonzeros in the various block rows
2077273d9f13SBarry Smith            of the in diagonal portion of the local (possibly different for each block
2078273d9f13SBarry Smith            row) or PETSC_NULL.  You must leave room for the diagonal entry even if it is zero.
2079273d9f13SBarry Smith .  o_nz  - number of block nonzeros per block row in the off-diagonal portion of local
2080273d9f13SBarry Smith            submatrix (same for all local rows).
2081273d9f13SBarry Smith -  o_nnz - array containing the number of nonzeros in the various block rows of the
2082273d9f13SBarry Smith            off-diagonal portion of the local submatrix (possibly different for
2083273d9f13SBarry Smith            each block row) or PETSC_NULL.
2084273d9f13SBarry Smith 
2085273d9f13SBarry Smith    Output Parameter:
2086273d9f13SBarry Smith 
2087273d9f13SBarry Smith 
2088273d9f13SBarry Smith    Options Database Keys:
2089273d9f13SBarry Smith .   -mat_no_unroll - uses code that does not unroll the loops in the
2090273d9f13SBarry Smith                      block calculations (much slower)
2091273d9f13SBarry Smith .   -mat_block_size - size of the blocks to use
2092273d9f13SBarry Smith 
2093273d9f13SBarry Smith    Notes:
2094273d9f13SBarry Smith    If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
2095273d9f13SBarry Smith    than it must be used on all processors that share the object for that argument.
2096273d9f13SBarry Smith 
2097273d9f13SBarry Smith    Storage Information:
2098273d9f13SBarry Smith    For a square global matrix we define each processor's diagonal portion
2099273d9f13SBarry Smith    to be its local rows and the corresponding columns (a square submatrix);
2100273d9f13SBarry Smith    each processor's off-diagonal portion encompasses the remainder of the
2101273d9f13SBarry Smith    local matrix (a rectangular submatrix).
2102273d9f13SBarry Smith 
2103273d9f13SBarry Smith    The user can specify preallocated storage for the diagonal part of
2104273d9f13SBarry Smith    the local submatrix with either d_nz or d_nnz (not both).  Set
2105273d9f13SBarry Smith    d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
2106273d9f13SBarry Smith    memory allocation.  Likewise, specify preallocated storage for the
2107273d9f13SBarry Smith    off-diagonal part of the local submatrix with o_nz or o_nnz (not both).
2108273d9f13SBarry Smith 
2109273d9f13SBarry Smith    Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
2110273d9f13SBarry Smith    the figure below we depict these three local rows and all columns (0-11).
2111273d9f13SBarry Smith 
2112273d9f13SBarry Smith .vb
2113273d9f13SBarry Smith            0 1 2 3 4 5 6 7 8 9 10 11
2114273d9f13SBarry Smith           -------------------
2115273d9f13SBarry Smith    row 3  |  o o o d d d o o o o o o
2116273d9f13SBarry Smith    row 4  |  o o o d d d o o o o o o
2117273d9f13SBarry Smith    row 5  |  o o o d d d o o o o o o
2118273d9f13SBarry Smith           -------------------
2119273d9f13SBarry Smith .ve
2120273d9f13SBarry Smith 
2121273d9f13SBarry Smith    Thus, any entries in the d locations are stored in the d (diagonal)
2122273d9f13SBarry Smith    submatrix, and any entries in the o locations are stored in the
2123273d9f13SBarry Smith    o (off-diagonal) submatrix.  Note that the d and the o submatrices are
2124273d9f13SBarry Smith    stored simply in the MATSEQBAIJ format for compressed row storage.
2125273d9f13SBarry Smith 
2126273d9f13SBarry Smith    Now d_nz should indicate the number of block nonzeros per row in the d matrix,
2127273d9f13SBarry Smith    and o_nz should indicate the number of block nonzeros per row in the o matrix.
2128273d9f13SBarry Smith    In general, for PDE problems in which most nonzeros are near the diagonal,
2129273d9f13SBarry Smith    one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
2130273d9f13SBarry Smith    or you will get TERRIBLE performance; see the users' manual chapter on
2131273d9f13SBarry Smith    matrices.
2132273d9f13SBarry Smith 
2133273d9f13SBarry Smith    Level: intermediate
2134273d9f13SBarry Smith 
2135273d9f13SBarry Smith .keywords: matrix, block, aij, compressed row, sparse, parallel
2136273d9f13SBarry Smith 
2137273d9f13SBarry Smith .seealso: MatCreate(), MatCreateSeqBAIJ(), MatSetValues(), MatCreateMPIBAIJ()
2138273d9f13SBarry Smith @*/
2139273d9f13SBarry Smith int MatMPIBAIJSetPreallocation(Mat B,int bs,int d_nz,int *d_nnz,int o_nz,int *o_nnz)
2140273d9f13SBarry Smith {
2141273d9f13SBarry Smith   Mat_MPIBAIJ  *b;
2142273d9f13SBarry Smith   int          ierr,i;
2143273d9f13SBarry Smith   PetscTruth   flg2;
2144273d9f13SBarry Smith 
2145273d9f13SBarry Smith   PetscFunctionBegin;
2146273d9f13SBarry Smith   ierr = PetscTypeCompare((PetscObject)B,MATMPIBAIJ,&flg2);CHKERRQ(ierr);
2147273d9f13SBarry Smith   if (!flg2) PetscFunctionReturn(0);
214847a75d0bSBarry Smith 
2149273d9f13SBarry Smith   B->preallocated = PETSC_TRUE;
2150b0a32e0cSBarry Smith   ierr = PetscOptionsGetInt(PETSC_NULL,"-mat_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
2151273d9f13SBarry Smith 
2152273d9f13SBarry Smith   if (bs < 1) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Invalid block size specified, must be positive");
2153435da068SBarry Smith   if (d_nz == PETSC_DEFAULT || d_nz == PETSC_DECIDE) d_nz = 5;
2154435da068SBarry Smith   if (o_nz == PETSC_DEFAULT || o_nz == PETSC_DECIDE) o_nz = 2;
2155435da068SBarry Smith   if (d_nz < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"d_nz cannot be less than 0: value %d",d_nz);
2156435da068SBarry Smith   if (o_nz < 0) SETERRQ1(PETSC_ERR_ARG_OUTOFRANGE,"o_nz cannot be less than 0: value %d",o_nz);
2157273d9f13SBarry Smith   if (d_nnz) {
2158273d9f13SBarry Smith   for (i=0; i<B->m/bs; i++) {
2159273d9f13SBarry Smith       if (d_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"d_nnz cannot be less than -1: local row %d value %d",i,d_nnz[i]);
2160273d9f13SBarry Smith     }
2161273d9f13SBarry Smith   }
2162273d9f13SBarry Smith   if (o_nnz) {
2163273d9f13SBarry Smith     for (i=0; i<B->m/bs; i++) {
2164273d9f13SBarry Smith       if (o_nnz[i] < 0) SETERRQ2(PETSC_ERR_ARG_OUTOFRANGE,"o_nnz cannot be less than -1: local row %d value %d",i,o_nnz[i]);
2165273d9f13SBarry Smith     }
2166273d9f13SBarry Smith   }
2167273d9f13SBarry Smith 
216847a75d0bSBarry Smith   ierr = PetscSplitOwnershipBlock(B->comm,bs,&B->m,&B->M);CHKERRQ(ierr);
216947a75d0bSBarry Smith   ierr = PetscSplitOwnershipBlock(B->comm,bs,&B->n,&B->N);CHKERRQ(ierr);
217047a75d0bSBarry Smith   ierr = MapCreateMPI(B->comm,B->m,B->M,&B->rmap);CHKERRQ(ierr);
217147a75d0bSBarry Smith   ierr = MapCreateMPI(B->comm,B->n,B->N,&B->cmap);CHKERRQ(ierr);
217247a75d0bSBarry Smith 
2173273d9f13SBarry Smith   b = (Mat_MPIBAIJ*)B->data;
2174273d9f13SBarry Smith   b->bs  = bs;
2175273d9f13SBarry Smith   b->bs2 = bs*bs;
2176273d9f13SBarry Smith   b->mbs = B->m/bs;
2177273d9f13SBarry Smith   b->nbs = B->n/bs;
2178273d9f13SBarry Smith   b->Mbs = B->M/bs;
2179273d9f13SBarry Smith   b->Nbs = B->N/bs;
2180273d9f13SBarry Smith 
2181273d9f13SBarry Smith   ierr = MPI_Allgather(&b->mbs,1,MPI_INT,b->rowners+1,1,MPI_INT,B->comm);CHKERRQ(ierr);
2182273d9f13SBarry Smith   b->rowners[0]    = 0;
2183273d9f13SBarry Smith   for (i=2; i<=b->size; i++) {
2184273d9f13SBarry Smith     b->rowners[i] += b->rowners[i-1];
2185273d9f13SBarry Smith   }
2186273d9f13SBarry Smith   b->rstart    = b->rowners[b->rank];
2187273d9f13SBarry Smith   b->rend      = b->rowners[b->rank+1];
2188273d9f13SBarry Smith 
2189273d9f13SBarry Smith   ierr = MPI_Allgather(&b->nbs,1,MPI_INT,b->cowners+1,1,MPI_INT,B->comm);CHKERRQ(ierr);
2190273d9f13SBarry Smith   b->cowners[0] = 0;
2191273d9f13SBarry Smith   for (i=2; i<=b->size; i++) {
2192273d9f13SBarry Smith     b->cowners[i] += b->cowners[i-1];
2193273d9f13SBarry Smith   }
2194273d9f13SBarry Smith   b->cstart    = b->cowners[b->rank];
2195273d9f13SBarry Smith   b->cend      = b->cowners[b->rank+1];
2196273d9f13SBarry Smith 
2197273d9f13SBarry Smith   for (i=0; i<=b->size; i++) {
2198273d9f13SBarry Smith     b->rowners_bs[i] = b->rowners[i]*bs;
2199273d9f13SBarry Smith   }
2200273d9f13SBarry Smith   b->rstart_bs = b->rstart*bs;
2201273d9f13SBarry Smith   b->rend_bs   = b->rend*bs;
2202273d9f13SBarry Smith   b->cstart_bs = b->cstart*bs;
2203273d9f13SBarry Smith   b->cend_bs   = b->cend*bs;
2204273d9f13SBarry Smith 
2205273d9f13SBarry Smith   ierr = MatCreateSeqBAIJ(PETSC_COMM_SELF,bs,B->m,B->n,d_nz,d_nnz,&b->A);CHKERRQ(ierr);
2206b0a32e0cSBarry Smith   PetscLogObjectParent(B,b->A);
2207273d9f13SBarry Smith   ierr = MatCreateSeqBAIJ(PETSC_COMM_SELF,bs,B->m,B->N,o_nz,o_nnz,&b->B);CHKERRQ(ierr);
2208b0a32e0cSBarry Smith   PetscLogObjectParent(B,b->B);
2209273d9f13SBarry Smith   ierr = MatStashCreate_Private(B->comm,bs,&B->bstash);CHKERRQ(ierr);
2210273d9f13SBarry Smith 
2211273d9f13SBarry Smith   PetscFunctionReturn(0);
2212273d9f13SBarry Smith }
2213273d9f13SBarry Smith 
22144a2ae208SSatish Balay #undef __FUNCT__
22154a2ae208SSatish Balay #define __FUNCT__ "MatCreateMPIBAIJ"
221679bdfe76SSatish Balay /*@C
221779bdfe76SSatish Balay    MatCreateMPIBAIJ - Creates a sparse parallel matrix in block AIJ format
221879bdfe76SSatish Balay    (block compressed row).  For good matrix assembly performance
221979bdfe76SSatish Balay    the user should preallocate the matrix storage by setting the parameters
222079bdfe76SSatish Balay    d_nz (or d_nnz) and o_nz (or o_nnz).  By setting these parameters accurately,
222179bdfe76SSatish Balay    performance can be increased by more than a factor of 50.
222279bdfe76SSatish Balay 
2223db81eaa0SLois Curfman McInnes    Collective on MPI_Comm
2224db81eaa0SLois Curfman McInnes 
222579bdfe76SSatish Balay    Input Parameters:
2226db81eaa0SLois Curfman McInnes +  comm - MPI communicator
222779bdfe76SSatish Balay .  bs   - size of blockk
222879bdfe76SSatish Balay .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
222992e8d321SLois Curfman McInnes            This value should be the same as the local size used in creating the
223092e8d321SLois Curfman McInnes            y vector for the matrix-vector product y = Ax.
223192e8d321SLois Curfman McInnes .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
223292e8d321SLois Curfman McInnes            This value should be the same as the local size used in creating the
223392e8d321SLois Curfman McInnes            x vector for the matrix-vector product y = Ax.
2234be79a94dSBarry Smith .  M - number of global rows (or PETSC_DETERMINE to have calculated if m is given)
2235be79a94dSBarry Smith .  N - number of global columns (or PETSC_DETERMINE to have calculated if n is given)
223647a75d0bSBarry Smith .  d_nz  - number of nonzero blocks per block row in diagonal portion of local
223779bdfe76SSatish Balay            submatrix  (same for all local rows)
223847a75d0bSBarry Smith .  d_nnz - array containing the number of nonzero blocks in the various block rows
223992e8d321SLois Curfman McInnes            of the in diagonal portion of the local (possibly different for each block
2240db81eaa0SLois Curfman McInnes            row) or PETSC_NULL.  You must leave room for the diagonal entry even if it is zero.
224147a75d0bSBarry Smith .  o_nz  - number of nonzero blocks per block row in the off-diagonal portion of local
224279bdfe76SSatish Balay            submatrix (same for all local rows).
224347a75d0bSBarry Smith -  o_nnz - array containing the number of nonzero blocks in the various block rows of the
224492e8d321SLois Curfman McInnes            off-diagonal portion of the local submatrix (possibly different for
224592e8d321SLois Curfman McInnes            each block row) or PETSC_NULL.
224679bdfe76SSatish Balay 
224779bdfe76SSatish Balay    Output Parameter:
224879bdfe76SSatish Balay .  A - the matrix
224979bdfe76SSatish Balay 
2250db81eaa0SLois Curfman McInnes    Options Database Keys:
2251db81eaa0SLois Curfman McInnes .   -mat_no_unroll - uses code that does not unroll the loops in the
2252db81eaa0SLois Curfman McInnes                      block calculations (much slower)
2253db81eaa0SLois Curfman McInnes .   -mat_block_size - size of the blocks to use
22543ffaccefSLois Curfman McInnes 
2255b259b22eSLois Curfman McInnes    Notes:
225647a75d0bSBarry Smith    A nonzero block is any block that as 1 or more nonzeros in it
225747a75d0bSBarry Smith 
225879bdfe76SSatish Balay    The user MUST specify either the local or global matrix dimensions
225979bdfe76SSatish Balay    (possibly both).
226079bdfe76SSatish Balay 
2261be79a94dSBarry Smith    If PETSC_DECIDE or  PETSC_DETERMINE is used for a particular argument on one processor
2262be79a94dSBarry Smith    than it must be used on all processors that share the object for that argument.
2263be79a94dSBarry Smith 
226479bdfe76SSatish Balay    Storage Information:
226579bdfe76SSatish Balay    For a square global matrix we define each processor's diagonal portion
226679bdfe76SSatish Balay    to be its local rows and the corresponding columns (a square submatrix);
226779bdfe76SSatish Balay    each processor's off-diagonal portion encompasses the remainder of the
226879bdfe76SSatish Balay    local matrix (a rectangular submatrix).
226979bdfe76SSatish Balay 
227079bdfe76SSatish Balay    The user can specify preallocated storage for the diagonal part of
227179bdfe76SSatish Balay    the local submatrix with either d_nz or d_nnz (not both).  Set
227279bdfe76SSatish Balay    d_nz=PETSC_DEFAULT and d_nnz=PETSC_NULL for PETSc to control dynamic
227379bdfe76SSatish Balay    memory allocation.  Likewise, specify preallocated storage for the
227479bdfe76SSatish Balay    off-diagonal part of the local submatrix with o_nz or o_nnz (not both).
227579bdfe76SSatish Balay 
227679bdfe76SSatish Balay    Consider a processor that owns rows 3, 4 and 5 of a parallel matrix. In
227779bdfe76SSatish Balay    the figure below we depict these three local rows and all columns (0-11).
227879bdfe76SSatish Balay 
2279db81eaa0SLois Curfman McInnes .vb
2280db81eaa0SLois Curfman McInnes            0 1 2 3 4 5 6 7 8 9 10 11
2281db81eaa0SLois Curfman McInnes           -------------------
2282db81eaa0SLois Curfman McInnes    row 3  |  o o o d d d o o o o o o
2283db81eaa0SLois Curfman McInnes    row 4  |  o o o d d d o o o o o o
2284db81eaa0SLois Curfman McInnes    row 5  |  o o o d d d o o o o o o
2285db81eaa0SLois Curfman McInnes           -------------------
2286db81eaa0SLois Curfman McInnes .ve
228779bdfe76SSatish Balay 
228879bdfe76SSatish Balay    Thus, any entries in the d locations are stored in the d (diagonal)
228979bdfe76SSatish Balay    submatrix, and any entries in the o locations are stored in the
229079bdfe76SSatish Balay    o (off-diagonal) submatrix.  Note that the d and the o submatrices are
229157b952d6SSatish Balay    stored simply in the MATSEQBAIJ format for compressed row storage.
229279bdfe76SSatish Balay 
2293d64ed03dSBarry Smith    Now d_nz should indicate the number of block nonzeros per row in the d matrix,
2294d64ed03dSBarry Smith    and o_nz should indicate the number of block nonzeros per row in the o matrix.
229579bdfe76SSatish Balay    In general, for PDE problems in which most nonzeros are near the diagonal,
229692e8d321SLois Curfman McInnes    one expects d_nz >> o_nz.   For large problems you MUST preallocate memory
229792e8d321SLois Curfman McInnes    or you will get TERRIBLE performance; see the users' manual chapter on
22986da5968aSLois Curfman McInnes    matrices.
229979bdfe76SSatish Balay 
2300027ccd11SLois Curfman McInnes    Level: intermediate
2301027ccd11SLois Curfman McInnes 
230292e8d321SLois Curfman McInnes .keywords: matrix, block, aij, compressed row, sparse, parallel
230379bdfe76SSatish Balay 
23043eda8832SBarry Smith .seealso: MatCreate(), MatCreateSeqBAIJ(), MatSetValues(), MatCreateMPIBAIJ()
230579bdfe76SSatish Balay @*/
2306329f5518SBarry Smith int MatCreateMPIBAIJ(MPI_Comm comm,int bs,int m,int n,int M,int N,int d_nz,int *d_nnz,int o_nz,int *o_nnz,Mat *A)
230779bdfe76SSatish Balay {
2308273d9f13SBarry Smith   int ierr,size;
230979bdfe76SSatish Balay 
2310d64ed03dSBarry Smith   PetscFunctionBegin;
2311273d9f13SBarry Smith   ierr = MatCreate(comm,m,n,M,N,A);CHKERRQ(ierr);
2312d132466eSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
2313273d9f13SBarry Smith   if (size > 1) {
2314273d9f13SBarry Smith     ierr = MatSetType(*A,MATMPIBAIJ);CHKERRQ(ierr);
2315273d9f13SBarry Smith     ierr = MatMPIBAIJSetPreallocation(*A,bs,d_nz,d_nnz,o_nz,o_nnz);CHKERRQ(ierr);
2316273d9f13SBarry Smith   } else {
2317273d9f13SBarry Smith     ierr = MatSetType(*A,MATSEQBAIJ);CHKERRQ(ierr);
2318273d9f13SBarry Smith     ierr = MatSeqBAIJSetPreallocation(*A,bs,d_nz,d_nnz);CHKERRQ(ierr);
23193914022bSBarry Smith   }
23203a40ed3dSBarry Smith   PetscFunctionReturn(0);
232179bdfe76SSatish Balay }
2322026e39d0SSatish Balay 
23234a2ae208SSatish Balay #undef __FUNCT__
23244a2ae208SSatish Balay #define __FUNCT__ "MatDuplicate_MPIBAIJ"
23252e8a6d31SBarry Smith static int MatDuplicate_MPIBAIJ(Mat matin,MatDuplicateOption cpvalues,Mat *newmat)
23260ac07820SSatish Balay {
23270ac07820SSatish Balay   Mat         mat;
23280ac07820SSatish Balay   Mat_MPIBAIJ *a,*oldmat = (Mat_MPIBAIJ*)matin->data;
2329f1af5d2fSBarry Smith   int         ierr,len=0;
23300ac07820SSatish Balay 
2331d64ed03dSBarry Smith   PetscFunctionBegin;
23320ac07820SSatish Balay   *newmat       = 0;
2333273d9f13SBarry Smith   ierr = MatCreate(matin->comm,matin->m,matin->n,matin->M,matin->N,&mat);CHKERRQ(ierr);
2334273d9f13SBarry Smith   ierr = MatSetType(mat,MATMPIBAIJ);CHKERRQ(ierr);
2335273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
23360ac07820SSatish Balay   mat->assembled    = PETSC_TRUE;
2337273d9f13SBarry Smith   a      = (Mat_MPIBAIJ*)mat->data;
23380ac07820SSatish Balay   a->bs  = oldmat->bs;
23390ac07820SSatish Balay   a->bs2 = oldmat->bs2;
23400ac07820SSatish Balay   a->mbs = oldmat->mbs;
23410ac07820SSatish Balay   a->nbs = oldmat->nbs;
23420ac07820SSatish Balay   a->Mbs = oldmat->Mbs;
23430ac07820SSatish Balay   a->Nbs = oldmat->Nbs;
23440ac07820SSatish Balay 
23450ac07820SSatish Balay   a->rstart       = oldmat->rstart;
23460ac07820SSatish Balay   a->rend         = oldmat->rend;
23470ac07820SSatish Balay   a->cstart       = oldmat->cstart;
23480ac07820SSatish Balay   a->cend         = oldmat->cend;
23490ac07820SSatish Balay   a->size         = oldmat->size;
23500ac07820SSatish Balay   a->rank         = oldmat->rank;
2351aef5e8e0SSatish Balay   a->donotstash   = oldmat->donotstash;
2352aef5e8e0SSatish Balay   a->roworiented  = oldmat->roworiented;
2353aef5e8e0SSatish Balay   a->rowindices   = 0;
23540ac07820SSatish Balay   a->rowvalues    = 0;
23550ac07820SSatish Balay   a->getrowactive = PETSC_FALSE;
235630793edcSSatish Balay   a->barray       = 0;
23573123a43fSSatish Balay   a->rstart_bs    = oldmat->rstart_bs;
23583123a43fSSatish Balay   a->rend_bs      = oldmat->rend_bs;
23593123a43fSSatish Balay   a->cstart_bs    = oldmat->cstart_bs;
23603123a43fSSatish Balay   a->cend_bs      = oldmat->cend_bs;
23610ac07820SSatish Balay 
2362133cdb44SSatish Balay   /* hash table stuff */
2363133cdb44SSatish Balay   a->ht           = 0;
2364133cdb44SSatish Balay   a->hd           = 0;
2365133cdb44SSatish Balay   a->ht_size      = 0;
2366133cdb44SSatish Balay   a->ht_flag      = oldmat->ht_flag;
236725fdafccSSatish Balay   a->ht_fact      = oldmat->ht_fact;
2368133cdb44SSatish Balay   a->ht_total_ct  = 0;
2369133cdb44SSatish Balay   a->ht_insert_ct = 0;
2370133cdb44SSatish Balay 
2371549d3d68SSatish Balay   ierr = PetscMemcpy(a->rowners,oldmat->rowners,3*(a->size+2)*sizeof(int));CHKERRQ(ierr);
23728798bf22SSatish Balay   ierr = MatStashCreate_Private(matin->comm,1,&mat->stash);CHKERRQ(ierr);
23738798bf22SSatish Balay   ierr = MatStashCreate_Private(matin->comm,oldmat->bs,&mat->bstash);CHKERRQ(ierr);
23740ac07820SSatish Balay   if (oldmat->colmap) {
2375aa482453SBarry Smith #if defined (PETSC_USE_CTABLE)
23760f5bd95cSBarry Smith   ierr = PetscTableCreateCopy(oldmat->colmap,&a->colmap);CHKERRQ(ierr);
237748e59246SSatish Balay #else
237882502324SSatish Balay   ierr = PetscMalloc((a->Nbs)*sizeof(int),&a->colmap);CHKERRQ(ierr);
2379b0a32e0cSBarry Smith   PetscLogObjectMemory(mat,(a->Nbs)*sizeof(int));
2380549d3d68SSatish Balay   ierr = PetscMemcpy(a->colmap,oldmat->colmap,(a->Nbs)*sizeof(int));CHKERRQ(ierr);
238148e59246SSatish Balay #endif
23820ac07820SSatish Balay   } else a->colmap = 0;
23830ac07820SSatish Balay   if (oldmat->garray && (len = ((Mat_SeqBAIJ*)(oldmat->B->data))->nbs)) {
238482502324SSatish Balay     ierr = PetscMalloc(len*sizeof(int),&a->garray);CHKERRQ(ierr);
2385b0a32e0cSBarry Smith     PetscLogObjectMemory(mat,len*sizeof(int));
2386549d3d68SSatish Balay     ierr = PetscMemcpy(a->garray,oldmat->garray,len*sizeof(int));CHKERRQ(ierr);
23870ac07820SSatish Balay   } else a->garray = 0;
23880ac07820SSatish Balay 
23890ac07820SSatish Balay   ierr =  VecDuplicate(oldmat->lvec,&a->lvec);CHKERRQ(ierr);
2390b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->lvec);
23910ac07820SSatish Balay   ierr =  VecScatterCopy(oldmat->Mvctx,&a->Mvctx);CHKERRQ(ierr);
2392e18c124aSSatish Balay 
2393b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->Mvctx);
23942e8a6d31SBarry Smith   ierr =  MatDuplicate(oldmat->A,cpvalues,&a->A);CHKERRQ(ierr);
2395b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->A);
23962e8a6d31SBarry Smith   ierr =  MatDuplicate(oldmat->B,cpvalues,&a->B);CHKERRQ(ierr);
2397b0a32e0cSBarry Smith   PetscLogObjectParent(mat,a->B);
2398b0a32e0cSBarry Smith   ierr = PetscFListDuplicate(matin->qlist,&mat->qlist);CHKERRQ(ierr);
23990ac07820SSatish Balay   *newmat = mat;
24003a40ed3dSBarry Smith   PetscFunctionReturn(0);
24010ac07820SSatish Balay }
240257b952d6SSatish Balay 
2403e090d566SSatish Balay #include "petscsys.h"
240457b952d6SSatish Balay 
2405273d9f13SBarry Smith EXTERN_C_BEGIN
24064a2ae208SSatish Balay #undef __FUNCT__
24074a2ae208SSatish Balay #define __FUNCT__ "MatLoad_MPIBAIJ"
2408b0a32e0cSBarry Smith int MatLoad_MPIBAIJ(PetscViewer viewer,MatType type,Mat *newmat)
240957b952d6SSatish Balay {
241057b952d6SSatish Balay   Mat          A;
241157b952d6SSatish Balay   int          i,nz,ierr,j,rstart,rend,fd;
241257b952d6SSatish Balay   Scalar       *vals,*buf;
241357b952d6SSatish Balay   MPI_Comm     comm = ((PetscObject)viewer)->comm;
241457b952d6SSatish Balay   MPI_Status   status;
2415cee3aa6bSSatish Balay   int          header[4],rank,size,*rowlengths = 0,M,N,m,*rowners,*browners,maxnz,*cols;
241657b952d6SSatish Balay   int          *locrowlens,*sndcounts = 0,*procsnz = 0,jj,*mycols,*ibuf;
2417f1af5d2fSBarry Smith   int          tag = ((PetscObject)viewer)->tag,bs=1,Mbs,mbs,extra_rows;
241857b952d6SSatish Balay   int          *dlens,*odlens,*mask,*masked1,*masked2,rowcount,odcount;
241957b952d6SSatish Balay   int          dcount,kmax,k,nzcount,tmp;
242057b952d6SSatish Balay 
2421d64ed03dSBarry Smith   PetscFunctionBegin;
2422b0a32e0cSBarry Smith   ierr = PetscOptionsGetInt(PETSC_NULL,"-matload_block_size",&bs,PETSC_NULL);CHKERRQ(ierr);
242357b952d6SSatish Balay 
2424d132466eSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
2425d132466eSBarry Smith   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
242657b952d6SSatish Balay   if (!rank) {
2427b0a32e0cSBarry Smith     ierr = PetscViewerBinaryGetDescriptor(viewer,&fd);CHKERRQ(ierr);
2428e5638eb3SBarry Smith     ierr = PetscBinaryRead(fd,(char *)header,4,PETSC_INT);CHKERRQ(ierr);
242929bbc08cSBarry Smith     if (header[0] != MAT_COOKIE) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"not matrix object");
2430d64ed03dSBarry Smith     if (header[3] < 0) {
243129bbc08cSBarry Smith       SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"Matrix stored in special format, cannot load as MPIBAIJ");
2432d64ed03dSBarry Smith     }
24336c5fab8fSBarry Smith   }
2434d64ed03dSBarry Smith 
2435ca161407SBarry Smith   ierr = MPI_Bcast(header+1,3,MPI_INT,0,comm);CHKERRQ(ierr);
243657b952d6SSatish Balay   M = header[1]; N = header[2];
243757b952d6SSatish Balay 
243829bbc08cSBarry Smith   if (M != N) SETERRQ(PETSC_ERR_SUP,"Can only do square matrices");
243957b952d6SSatish Balay 
244057b952d6SSatish Balay   /*
244157b952d6SSatish Balay      This code adds extra rows to make sure the number of rows is
244257b952d6SSatish Balay      divisible by the blocksize
244357b952d6SSatish Balay   */
244457b952d6SSatish Balay   Mbs        = M/bs;
244557b952d6SSatish Balay   extra_rows = bs - M + bs*(Mbs);
244657b952d6SSatish Balay   if (extra_rows == bs) extra_rows = 0;
244757b952d6SSatish Balay   else                  Mbs++;
244857b952d6SSatish Balay   if (extra_rows &&!rank) {
2449b0a32e0cSBarry Smith     PetscLogInfo(0,"MatLoad_MPIBAIJ:Padding loaded matrix to match blocksize\n");
245057b952d6SSatish Balay   }
2451537820f0SBarry Smith 
245257b952d6SSatish Balay   /* determine ownership of all rows */
245357b952d6SSatish Balay   mbs        = Mbs/size + ((Mbs % size) > rank);
245457b952d6SSatish Balay   m          = mbs*bs;
2455b0a32e0cSBarry Smith   ierr       = PetscMalloc(2*(size+2)*sizeof(int),&rowners);CHKERRQ(ierr);
2456cee3aa6bSSatish Balay   browners   = rowners + size + 1;
2457ca161407SBarry Smith   ierr       = MPI_Allgather(&mbs,1,MPI_INT,rowners+1,1,MPI_INT,comm);CHKERRQ(ierr);
245857b952d6SSatish Balay   rowners[0] = 0;
2459cee3aa6bSSatish Balay   for (i=2; i<=size; i++) rowners[i] += rowners[i-1];
2460cee3aa6bSSatish Balay   for (i=0; i<=size;  i++) browners[i] = rowners[i]*bs;
246157b952d6SSatish Balay   rstart = rowners[rank];
246257b952d6SSatish Balay   rend   = rowners[rank+1];
246357b952d6SSatish Balay 
246457b952d6SSatish Balay   /* distribute row lengths to all processors */
246582502324SSatish Balay   ierr = PetscMalloc((rend-rstart)*bs*sizeof(int),&locrowlens);CHKERRQ(ierr);
246657b952d6SSatish Balay   if (!rank) {
2467b0a32e0cSBarry Smith     ierr = PetscMalloc((M+extra_rows)*sizeof(int),&rowlengths);CHKERRQ(ierr);
2468e5638eb3SBarry Smith     ierr = PetscBinaryRead(fd,rowlengths,M,PETSC_INT);CHKERRQ(ierr);
246957b952d6SSatish Balay     for (i=0; i<extra_rows; i++) rowlengths[M+i] = 1;
247082502324SSatish Balay     ierr = PetscMalloc(size*sizeof(int),&sndcounts);CHKERRQ(ierr);
2471cee3aa6bSSatish Balay     for (i=0; i<size; i++) sndcounts[i] = browners[i+1] - browners[i];
2472ca161407SBarry Smith     ierr = MPI_Scatterv(rowlengths,sndcounts,browners,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
2473606d414cSSatish Balay     ierr = PetscFree(sndcounts);CHKERRQ(ierr);
2474d64ed03dSBarry Smith   } else {
2475ca161407SBarry Smith     ierr = MPI_Scatterv(0,0,0,MPI_INT,locrowlens,(rend-rstart)*bs,MPI_INT,0,comm);CHKERRQ(ierr);
247657b952d6SSatish Balay   }
247757b952d6SSatish Balay 
247857b952d6SSatish Balay   if (!rank) {
247957b952d6SSatish Balay     /* calculate the number of nonzeros on each processor */
248082502324SSatish Balay     ierr = PetscMalloc(size*sizeof(int),&procsnz);CHKERRQ(ierr);
2481549d3d68SSatish Balay     ierr = PetscMemzero(procsnz,size*sizeof(int));CHKERRQ(ierr);
248257b952d6SSatish Balay     for (i=0; i<size; i++) {
248357b952d6SSatish Balay       for (j=rowners[i]*bs; j< rowners[i+1]*bs; j++) {
248457b952d6SSatish Balay         procsnz[i] += rowlengths[j];
248557b952d6SSatish Balay       }
248657b952d6SSatish Balay     }
2487606d414cSSatish Balay     ierr = PetscFree(rowlengths);CHKERRQ(ierr);
248857b952d6SSatish Balay 
248957b952d6SSatish Balay     /* determine max buffer needed and allocate it */
249057b952d6SSatish Balay     maxnz = 0;
249157b952d6SSatish Balay     for (i=0; i<size; i++) {
249257b952d6SSatish Balay       maxnz = PetscMax(maxnz,procsnz[i]);
249357b952d6SSatish Balay     }
249482502324SSatish Balay     ierr = PetscMalloc(maxnz*sizeof(int),&cols);CHKERRQ(ierr);
249557b952d6SSatish Balay 
249657b952d6SSatish Balay     /* read in my part of the matrix column indices  */
249757b952d6SSatish Balay     nz     = procsnz[0];
249882502324SSatish Balay     ierr   = PetscMalloc(nz*sizeof(int),&ibuf);CHKERRQ(ierr);
249957b952d6SSatish Balay     mycols = ibuf;
2500cee3aa6bSSatish Balay     if (size == 1)  nz -= extra_rows;
2501e5638eb3SBarry Smith     ierr = PetscBinaryRead(fd,mycols,nz,PETSC_INT);CHKERRQ(ierr);
2502cee3aa6bSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { mycols[nz+i] = M+i; }
2503cee3aa6bSSatish Balay 
250457b952d6SSatish Balay     /* read in every ones (except the last) and ship off */
250557b952d6SSatish Balay     for (i=1; i<size-1; i++) {
250657b952d6SSatish Balay       nz   = procsnz[i];
2507e5638eb3SBarry Smith       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
2508ca161407SBarry Smith       ierr = MPI_Send(cols,nz,MPI_INT,i,tag,comm);CHKERRQ(ierr);
250957b952d6SSatish Balay     }
251057b952d6SSatish Balay     /* read in the stuff for the last proc */
251157b952d6SSatish Balay     if (size != 1) {
251257b952d6SSatish Balay       nz   = procsnz[size-1] - extra_rows;  /* the extra rows are not on the disk */
2513e5638eb3SBarry Smith       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
251457b952d6SSatish Balay       for (i=0; i<extra_rows; i++) cols[nz+i] = M+i;
2515ca161407SBarry Smith       ierr = MPI_Send(cols,nz+extra_rows,MPI_INT,size-1,tag,comm);CHKERRQ(ierr);
251657b952d6SSatish Balay     }
2517606d414cSSatish Balay     ierr = PetscFree(cols);CHKERRQ(ierr);
2518d64ed03dSBarry Smith   } else {
251957b952d6SSatish Balay     /* determine buffer space needed for message */
252057b952d6SSatish Balay     nz = 0;
252157b952d6SSatish Balay     for (i=0; i<m; i++) {
252257b952d6SSatish Balay       nz += locrowlens[i];
252357b952d6SSatish Balay     }
252482502324SSatish Balay     ierr   = PetscMalloc(nz*sizeof(int),&ibuf);CHKERRQ(ierr);
252557b952d6SSatish Balay     mycols = ibuf;
252657b952d6SSatish Balay     /* receive message of column indices*/
2527ca161407SBarry Smith     ierr = MPI_Recv(mycols,nz,MPI_INT,0,tag,comm,&status);CHKERRQ(ierr);
2528ca161407SBarry Smith     ierr = MPI_Get_count(&status,MPI_INT,&maxnz);CHKERRQ(ierr);
252929bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
253057b952d6SSatish Balay   }
253157b952d6SSatish Balay 
253257b952d6SSatish Balay   /* loop over local rows, determining number of off diagonal entries */
253382502324SSatish Balay   ierr     = PetscMalloc(2*(rend-rstart+1)*sizeof(int),&dlens);CHKERRQ(ierr);
2534cee3aa6bSSatish Balay   odlens   = dlens + (rend-rstart);
253582502324SSatish Balay   ierr     = PetscMalloc(3*Mbs*sizeof(int),&mask);CHKERRQ(ierr);
2536549d3d68SSatish Balay   ierr     = PetscMemzero(mask,3*Mbs*sizeof(int));CHKERRQ(ierr);
253757b952d6SSatish Balay   masked1  = mask    + Mbs;
253857b952d6SSatish Balay   masked2  = masked1 + Mbs;
253957b952d6SSatish Balay   rowcount = 0; nzcount = 0;
254057b952d6SSatish Balay   for (i=0; i<mbs; i++) {
254157b952d6SSatish Balay     dcount  = 0;
254257b952d6SSatish Balay     odcount = 0;
254357b952d6SSatish Balay     for (j=0; j<bs; j++) {
254457b952d6SSatish Balay       kmax = locrowlens[rowcount];
254557b952d6SSatish Balay       for (k=0; k<kmax; k++) {
254657b952d6SSatish Balay         tmp = mycols[nzcount++]/bs;
254757b952d6SSatish Balay         if (!mask[tmp]) {
254857b952d6SSatish Balay           mask[tmp] = 1;
254957b952d6SSatish Balay           if (tmp < rstart || tmp >= rend) masked2[odcount++] = tmp;
255057b952d6SSatish Balay           else masked1[dcount++] = tmp;
255157b952d6SSatish Balay         }
255257b952d6SSatish Balay       }
255357b952d6SSatish Balay       rowcount++;
255457b952d6SSatish Balay     }
2555cee3aa6bSSatish Balay 
255657b952d6SSatish Balay     dlens[i]  = dcount;
255757b952d6SSatish Balay     odlens[i] = odcount;
2558cee3aa6bSSatish Balay 
255957b952d6SSatish Balay     /* zero out the mask elements we set */
256057b952d6SSatish Balay     for (j=0; j<dcount; j++) mask[masked1[j]] = 0;
256157b952d6SSatish Balay     for (j=0; j<odcount; j++) mask[masked2[j]] = 0;
256257b952d6SSatish Balay   }
2563cee3aa6bSSatish Balay 
256457b952d6SSatish Balay   /* create our matrix */
256547a75d0bSBarry Smith   ierr = MatCreateMPIBAIJ(comm,bs,m,m,M+extra_rows,N+extra_rows,0,dlens,0,odlens,newmat);CHKERRQ(ierr);
256657b952d6SSatish Balay   A = *newmat;
25676d4a8577SBarry Smith   MatSetOption(A,MAT_COLUMNS_SORTED);
256857b952d6SSatish Balay 
256957b952d6SSatish Balay   if (!rank) {
257082502324SSatish Balay     ierr = PetscMalloc(maxnz*sizeof(Scalar),&buf);CHKERRQ(ierr);
257157b952d6SSatish Balay     /* read in my part of the matrix numerical values  */
257257b952d6SSatish Balay     nz = procsnz[0];
257357b952d6SSatish Balay     vals = buf;
2574cee3aa6bSSatish Balay     mycols = ibuf;
2575cee3aa6bSSatish Balay     if (size == 1)  nz -= extra_rows;
2576e5638eb3SBarry Smith     ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2577cee3aa6bSSatish Balay     if (size == 1)  for (i=0; i< extra_rows; i++) { vals[nz+i] = 1.0; }
2578537820f0SBarry Smith 
257957b952d6SSatish Balay     /* insert into matrix */
258057b952d6SSatish Balay     jj      = rstart*bs;
258157b952d6SSatish Balay     for (i=0; i<m; i++) {
2582b48991e4SBarry Smith       ierr = MatSetValues(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
258357b952d6SSatish Balay       mycols += locrowlens[i];
258457b952d6SSatish Balay       vals   += locrowlens[i];
258557b952d6SSatish Balay       jj++;
258657b952d6SSatish Balay     }
258757b952d6SSatish Balay     /* read in other processors (except the last one) and ship out */
258857b952d6SSatish Balay     for (i=1; i<size-1; i++) {
258957b952d6SSatish Balay       nz   = procsnz[i];
259057b952d6SSatish Balay       vals = buf;
2591e5638eb3SBarry Smith       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
2592ca161407SBarry Smith       ierr = MPI_Send(vals,nz,MPIU_SCALAR,i,A->tag,comm);CHKERRQ(ierr);
259357b952d6SSatish Balay     }
259457b952d6SSatish Balay     /* the last proc */
259557b952d6SSatish Balay     if (size != 1){
259657b952d6SSatish Balay       nz   = procsnz[i] - extra_rows;
2597cee3aa6bSSatish Balay       vals = buf;
2598e5638eb3SBarry Smith       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
259957b952d6SSatish Balay       for (i=0; i<extra_rows; i++) vals[nz+i] = 1.0;
2600ca161407SBarry Smith       ierr = MPI_Send(vals,nz+extra_rows,MPIU_SCALAR,size-1,A->tag,comm);CHKERRQ(ierr);
260157b952d6SSatish Balay     }
2602606d414cSSatish Balay     ierr = PetscFree(procsnz);CHKERRQ(ierr);
2603d64ed03dSBarry Smith   } else {
260457b952d6SSatish Balay     /* receive numeric values */
260582502324SSatish Balay     ierr = PetscMalloc(nz*sizeof(Scalar),&buf);CHKERRQ(ierr);
260657b952d6SSatish Balay 
260757b952d6SSatish Balay     /* receive message of values*/
260857b952d6SSatish Balay     vals   = buf;
2609cee3aa6bSSatish Balay     mycols = ibuf;
2610ca161407SBarry Smith     ierr   = MPI_Recv(vals,nz,MPIU_SCALAR,0,A->tag,comm,&status);CHKERRQ(ierr);
2611ca161407SBarry Smith     ierr   = MPI_Get_count(&status,MPIU_SCALAR,&maxnz);CHKERRQ(ierr);
261229bbc08cSBarry Smith     if (maxnz != nz) SETERRQ(PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
261357b952d6SSatish Balay 
261457b952d6SSatish Balay     /* insert into matrix */
261557b952d6SSatish Balay     jj      = rstart*bs;
2616cee3aa6bSSatish Balay     for (i=0; i<m; i++) {
2617b48991e4SBarry Smith       ierr    = MatSetValues(A,1,&jj,locrowlens[i],mycols,vals,INSERT_VALUES);CHKERRQ(ierr);
261857b952d6SSatish Balay       mycols += locrowlens[i];
261957b952d6SSatish Balay       vals   += locrowlens[i];
262057b952d6SSatish Balay       jj++;
262157b952d6SSatish Balay     }
262257b952d6SSatish Balay   }
2623606d414cSSatish Balay   ierr = PetscFree(locrowlens);CHKERRQ(ierr);
2624606d414cSSatish Balay   ierr = PetscFree(buf);CHKERRQ(ierr);
2625606d414cSSatish Balay   ierr = PetscFree(ibuf);CHKERRQ(ierr);
2626606d414cSSatish Balay   ierr = PetscFree(rowners);CHKERRQ(ierr);
2627606d414cSSatish Balay   ierr = PetscFree(dlens);CHKERRQ(ierr);
2628606d414cSSatish Balay   ierr = PetscFree(mask);CHKERRQ(ierr);
26296d4a8577SBarry Smith   ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
26306d4a8577SBarry Smith   ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
26313a40ed3dSBarry Smith   PetscFunctionReturn(0);
263257b952d6SSatish Balay }
2633273d9f13SBarry Smith EXTERN_C_END
263457b952d6SSatish Balay 
26354a2ae208SSatish Balay #undef __FUNCT__
26364a2ae208SSatish Balay #define __FUNCT__ "MatMPIBAIJSetHashTableFactor"
2637133cdb44SSatish Balay /*@
2638133cdb44SSatish Balay    MatMPIBAIJSetHashTableFactor - Sets the factor required to compute the size of the HashTable.
2639133cdb44SSatish Balay 
2640133cdb44SSatish Balay    Input Parameters:
2641133cdb44SSatish Balay .  mat  - the matrix
2642133cdb44SSatish Balay .  fact - factor
2643133cdb44SSatish Balay 
2644fee21e36SBarry Smith    Collective on Mat
2645fee21e36SBarry Smith 
26468c890885SBarry Smith    Level: advanced
26478c890885SBarry Smith 
2648133cdb44SSatish Balay   Notes:
2649133cdb44SSatish Balay    This can also be set by the command line option: -mat_use_hash_table fact
2650133cdb44SSatish Balay 
2651133cdb44SSatish Balay .keywords: matrix, hashtable, factor, HT
2652133cdb44SSatish Balay 
2653133cdb44SSatish Balay .seealso: MatSetOption()
2654133cdb44SSatish Balay @*/
2655329f5518SBarry Smith int MatMPIBAIJSetHashTableFactor(Mat mat,PetscReal fact)
2656133cdb44SSatish Balay {
265725fdafccSSatish Balay   Mat_MPIBAIJ *baij;
2658273d9f13SBarry Smith   int         ierr;
2659273d9f13SBarry Smith   PetscTruth  flg;
2660133cdb44SSatish Balay 
2661133cdb44SSatish Balay   PetscFunctionBegin;
2662133cdb44SSatish Balay   PetscValidHeaderSpecific(mat,MAT_COOKIE);
2663273d9f13SBarry Smith   ierr = PetscTypeCompare((PetscObject)mat,MATMPIBAIJ,&flg);CHKERRQ(ierr);
2664273d9f13SBarry Smith   if (!flg) {
266529bbc08cSBarry Smith     SETERRQ(PETSC_ERR_ARG_WRONG,"Incorrect matrix type. Use MPIBAIJ only.");
2666133cdb44SSatish Balay   }
2667133cdb44SSatish Balay   baij = (Mat_MPIBAIJ*)mat->data;
2668133cdb44SSatish Balay   baij->ht_fact = fact;
2669133cdb44SSatish Balay   PetscFunctionReturn(0);
2670133cdb44SSatish Balay }
2671f2a5309cSSatish Balay 
26724a2ae208SSatish Balay #undef __FUNCT__
26734a2ae208SSatish Balay #define __FUNCT__ "MatMPIBAIJGetSeqBAIJ"
2674435da068SBarry Smith int MatMPIBAIJGetSeqBAIJ(Mat A,Mat *Ad,Mat *Ao,int **colmap)
2675f2a5309cSSatish Balay {
2676f2a5309cSSatish Balay   Mat_MPIBAIJ *a = (Mat_MPIBAIJ *)A->data;
2677f2a5309cSSatish Balay   PetscFunctionBegin;
2678f2a5309cSSatish Balay   *Ad     = a->A;
2679f2a5309cSSatish Balay   *Ao     = a->B;
2680195d93cdSBarry Smith   *colmap = a->garray;
2681f2a5309cSSatish Balay   PetscFunctionReturn(0);
2682f2a5309cSSatish Balay }
2683