1be1d678aSKris Buschelman #define PETSCMAT_DLL 2cac129eeSSatish Balay 37c4f633dSBarry Smith #include "../src/mat/impls/baij/seq/baij.h" 4c60f0209SBarry Smith #include "../src/mat/blockinvert.h" 50a835dfdSSatish Balay #include "petscbt.h" 6cac129eeSSatish Balay 74a2ae208SSatish Balay #undef __FUNCT__ 84a2ae208SSatish Balay #define __FUNCT__ "MatIncreaseOverlap_SeqBAIJ" 9690b6cddSBarry Smith PetscErrorCode MatIncreaseOverlap_SeqBAIJ(Mat A,PetscInt is_max,IS is[],PetscInt ov) 10a3192f15SSatish Balay { 11a3192f15SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 126849ba73SBarry Smith PetscErrorCode ierr; 135d0c19d7SBarry Smith PetscInt row,i,j,k,l,m,n,*nidx,isz,val,ival; 145d0c19d7SBarry Smith const PetscInt *idx; 15690b6cddSBarry Smith PetscInt start,end,*ai,*aj,bs,*nidx2; 16f1af5d2fSBarry Smith PetscBT table; 17a3192f15SSatish Balay 183a40ed3dSBarry Smith PetscFunctionBegin; 19a3192f15SSatish Balay m = a->mbs; 20a3192f15SSatish Balay ai = a->i; 21a3192f15SSatish Balay aj = a->j; 22d0f46423SBarry Smith bs = A->rmap->bs; 23a3192f15SSatish Balay 2429bbc08cSBarry Smith if (ov < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative overlap specified"); 25a3192f15SSatish Balay 266831982aSBarry Smith ierr = PetscBTCreate(m,table);CHKERRQ(ierr); 27690b6cddSBarry Smith ierr = PetscMalloc((m+1)*sizeof(PetscInt),&nidx);CHKERRQ(ierr); 28d0f46423SBarry Smith ierr = PetscMalloc((A->rmap->N+1)*sizeof(PetscInt),&nidx2);CHKERRQ(ierr); 29a3192f15SSatish Balay 30a3192f15SSatish Balay for (i=0; i<is_max; i++) { 31a3192f15SSatish Balay /* Initialise the two local arrays */ 32a3192f15SSatish Balay isz = 0; 336831982aSBarry Smith ierr = PetscBTMemzero(m,table);CHKERRQ(ierr); 34a3192f15SSatish Balay 35a3192f15SSatish Balay /* Extract the indices, assume there can be duplicate entries */ 36a3192f15SSatish Balay ierr = ISGetIndices(is[i],&idx);CHKERRQ(ierr); 37b9b97703SBarry Smith ierr = ISGetLocalSize(is[i],&n);CHKERRQ(ierr); 38a3192f15SSatish Balay 39a3192f15SSatish Balay /* Enter these into the temp arrays i.e mark table[row], enter row into new index */ 40a3192f15SSatish Balay for (j=0; j<n ; ++j){ 41218c64b6SSatish Balay ival = idx[j]/bs; /* convert the indices into block indices */ 425eee224dSHong Zhang if (ival>=m) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"index greater than mat-dim"); 43f1af5d2fSBarry Smith if(!PetscBTLookupSet(table,ival)) { nidx[isz++] = ival;} 44a3192f15SSatish Balay } 45a3192f15SSatish Balay ierr = ISRestoreIndices(is[i],&idx);CHKERRQ(ierr); 46a3192f15SSatish Balay ierr = ISDestroy(is[i]);CHKERRQ(ierr); 47a3192f15SSatish Balay 48a3192f15SSatish Balay k = 0; 49a3192f15SSatish Balay for (j=0; j<ov; j++){ /* for each overlap*/ 50a3192f15SSatish Balay n = isz; 51a3192f15SSatish Balay for (; k<n ; k++){ /* do only those rows in nidx[k], which are not done yet */ 52a3192f15SSatish Balay row = nidx[k]; 53a3192f15SSatish Balay start = ai[row]; 54a3192f15SSatish Balay end = ai[row+1]; 55a3192f15SSatish Balay for (l = start; l<end ; l++){ 56a3192f15SSatish Balay val = aj[l]; 57f1af5d2fSBarry Smith if (!PetscBTLookupSet(table,val)) {nidx[isz++] = val;} 58a3192f15SSatish Balay } 59a3192f15SSatish Balay } 60a3192f15SSatish Balay } 61218c64b6SSatish Balay /* expand the Index Set */ 62218c64b6SSatish Balay for (j=0; j<isz; j++) { 63218c64b6SSatish Balay for (k=0; k<bs; k++) 64218c64b6SSatish Balay nidx2[j*bs+k] = nidx[j]*bs+k; 65218c64b6SSatish Balay } 66329f5518SBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,isz*bs,nidx2,is+i);CHKERRQ(ierr); 67a3192f15SSatish Balay } 686831982aSBarry Smith ierr = PetscBTDestroy(table);CHKERRQ(ierr); 69606d414cSSatish Balay ierr = PetscFree(nidx);CHKERRQ(ierr); 70606d414cSSatish Balay ierr = PetscFree(nidx2);CHKERRQ(ierr); 713a40ed3dSBarry Smith PetscFunctionReturn(0); 72a3192f15SSatish Balay } 731c351548SSatish Balay 744a2ae208SSatish Balay #undef __FUNCT__ 754a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrix_SeqBAIJ_Private" 764aa3045dSJed Brown PetscErrorCode MatGetSubMatrix_SeqBAIJ_Private(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B) 77736121d4SSatish Balay { 78736121d4SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*c; 796849ba73SBarry Smith PetscErrorCode ierr; 80690b6cddSBarry Smith PetscInt *smap,i,k,kstart,kend,oldcols = a->nbs,*lens; 81690b6cddSBarry Smith PetscInt row,mat_i,*mat_j,tcol,*mat_ilen; 825d0c19d7SBarry Smith const PetscInt *irow,*icol; 835d0c19d7SBarry Smith PetscInt nrows,ncols,*ssmap,bs=A->rmap->bs,bs2=a->bs2; 84690b6cddSBarry Smith PetscInt *aj = a->j,*ai = a->i; 853f1db9ecSBarry Smith MatScalar *mat_a; 86736121d4SSatish Balay Mat C; 8714ca34e6SBarry Smith PetscTruth flag,sorted; 88736121d4SSatish Balay 893a40ed3dSBarry Smith PetscFunctionBegin; 9014ca34e6SBarry Smith ierr = ISSorted(iscol,&sorted);CHKERRQ(ierr); 9114ca34e6SBarry Smith if (!sorted) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"IS is not sorted"); 92736121d4SSatish Balay 93736121d4SSatish Balay ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr); 94218c64b6SSatish Balay ierr = ISGetIndices(iscol,&icol);CHKERRQ(ierr); 95b9b97703SBarry Smith ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr); 96b9b97703SBarry Smith ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr); 97736121d4SSatish Balay 98690b6cddSBarry Smith ierr = PetscMalloc((1+oldcols)*sizeof(PetscInt),&smap);CHKERRQ(ierr); 99736121d4SSatish Balay ssmap = smap; 100690b6cddSBarry Smith ierr = PetscMalloc((1+nrows)*sizeof(PetscInt),&lens);CHKERRQ(ierr); 101690b6cddSBarry Smith ierr = PetscMemzero(smap,oldcols*sizeof(PetscInt));CHKERRQ(ierr); 102736121d4SSatish Balay for (i=0; i<ncols; i++) smap[icol[i]] = i+1; 103736121d4SSatish Balay /* determine lens of each row */ 104736121d4SSatish Balay for (i=0; i<nrows; i++) { 105736121d4SSatish Balay kstart = ai[irow[i]]; 106736121d4SSatish Balay kend = kstart + a->ilen[irow[i]]; 107736121d4SSatish Balay lens[i] = 0; 108736121d4SSatish Balay for (k=kstart; k<kend; k++) { 109736121d4SSatish Balay if (ssmap[aj[k]]) { 110736121d4SSatish Balay lens[i]++; 111736121d4SSatish Balay } 112736121d4SSatish Balay } 113736121d4SSatish Balay } 114736121d4SSatish Balay /* Create and fill new matrix */ 115736121d4SSatish Balay if (scall == MAT_REUSE_MATRIX) { 116736121d4SSatish Balay c = (Mat_SeqBAIJ *)((*B)->data); 117736121d4SSatish Balay 118d0f46423SBarry Smith if (c->mbs!=nrows || c->nbs!=ncols || (*B)->rmap->bs!=bs) SETERRQ(PETSC_ERR_ARG_SIZ,"Submatrix wrong size"); 119690b6cddSBarry Smith ierr = PetscMemcmp(c->ilen,lens,c->mbs *sizeof(PetscInt),&flag);CHKERRQ(ierr); 120abc0a331SBarry Smith if (!flag) { 12129bbc08cSBarry Smith SETERRQ(PETSC_ERR_ARG_SIZ,"Cannot reuse matrix. wrong no of nonzeros"); 122736121d4SSatish Balay } 123690b6cddSBarry Smith ierr = PetscMemzero(c->ilen,c->mbs*sizeof(PetscInt));CHKERRQ(ierr); 124736121d4SSatish Balay C = *B; 1253a40ed3dSBarry Smith } else { 1267adad957SLisandro Dalcin ierr = MatCreate(((PetscObject)A)->comm,&C);CHKERRQ(ierr); 127f69a0ea3SMatthew Knepley ierr = MatSetSizes(C,nrows*bs,ncols*bs,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr); 1287adad957SLisandro Dalcin ierr = MatSetType(C,((PetscObject)A)->type_name);CHKERRQ(ierr); 129ab93d7beSBarry Smith ierr = MatSeqBAIJSetPreallocation_SeqBAIJ(C,bs,0,lens);CHKERRQ(ierr); 130736121d4SSatish Balay } 131736121d4SSatish Balay c = (Mat_SeqBAIJ *)(C->data); 132736121d4SSatish Balay for (i=0; i<nrows; i++) { 133736121d4SSatish Balay row = irow[i]; 134736121d4SSatish Balay kstart = ai[row]; 135736121d4SSatish Balay kend = kstart + a->ilen[row]; 136736121d4SSatish Balay mat_i = c->i[i]; 137736121d4SSatish Balay mat_j = c->j + mat_i; 138218c64b6SSatish Balay mat_a = c->a + mat_i*bs2; 139736121d4SSatish Balay mat_ilen = c->ilen + i; 140736121d4SSatish Balay for (k=kstart; k<kend; k++) { 141736121d4SSatish Balay if ((tcol=ssmap[a->j[k]])) { 142736121d4SSatish Balay *mat_j++ = tcol - 1; 143549d3d68SSatish Balay ierr = PetscMemcpy(mat_a,a->a+k*bs2,bs2*sizeof(MatScalar));CHKERRQ(ierr); 144549d3d68SSatish Balay mat_a += bs2; 145736121d4SSatish Balay (*mat_ilen)++; 146736121d4SSatish Balay } 147736121d4SSatish Balay } 148736121d4SSatish Balay } 149218c64b6SSatish Balay 150736121d4SSatish Balay /* Free work space */ 151736121d4SSatish Balay ierr = ISRestoreIndices(iscol,&icol);CHKERRQ(ierr); 152606d414cSSatish Balay ierr = PetscFree(smap);CHKERRQ(ierr); 153606d414cSSatish Balay ierr = PetscFree(lens);CHKERRQ(ierr); 1546d4a8577SBarry Smith ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1556d4a8577SBarry Smith ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 156736121d4SSatish Balay 157736121d4SSatish Balay ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr); 158736121d4SSatish Balay *B = C; 1593a40ed3dSBarry Smith PetscFunctionReturn(0); 160736121d4SSatish Balay } 161736121d4SSatish Balay 1624a2ae208SSatish Balay #undef __FUNCT__ 1634a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrix_SeqBAIJ" 1644aa3045dSJed Brown PetscErrorCode MatGetSubMatrix_SeqBAIJ(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B) 165218c64b6SSatish Balay { 166218c64b6SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 167218c64b6SSatish Balay IS is1,is2; 1686849ba73SBarry Smith PetscErrorCode ierr; 1695d0c19d7SBarry Smith PetscInt *vary,*iary,nrows,ncols,i,bs=A->rmap->bs,count; 1705d0c19d7SBarry Smith const PetscInt *irow,*icol; 171218c64b6SSatish Balay 1723a40ed3dSBarry Smith PetscFunctionBegin; 173218c64b6SSatish Balay ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr); 174218c64b6SSatish Balay ierr = ISGetIndices(iscol,&icol);CHKERRQ(ierr); 175b9b97703SBarry Smith ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr); 176b9b97703SBarry Smith ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr); 177218c64b6SSatish Balay 178218c64b6SSatish Balay /* Verify if the indices corespond to each element in a block 179218c64b6SSatish Balay and form the IS with compressed IS */ 180690b6cddSBarry Smith ierr = PetscMalloc(2*(a->mbs+1)*sizeof(PetscInt),&vary);CHKERRQ(ierr); 181218c64b6SSatish Balay iary = vary + a->mbs; 182690b6cddSBarry Smith ierr = PetscMemzero(vary,(a->mbs)*sizeof(PetscInt));CHKERRQ(ierr); 183218c64b6SSatish Balay for (i=0; i<nrows; i++) vary[irow[i]/bs]++; 184218c64b6SSatish Balay count = 0; 185218c64b6SSatish Balay for (i=0; i<a->mbs; i++) { 186634064b4SBarry Smith if (vary[i]!=0 && vary[i]!=bs) SETERRQ(PETSC_ERR_ARG_SIZ,"Index set does not match blocks"); 187218c64b6SSatish Balay if (vary[i]==bs) iary[count++] = i; 188218c64b6SSatish Balay } 189029af93fSBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,count,iary,&is1);CHKERRQ(ierr); 190218c64b6SSatish Balay 191690b6cddSBarry Smith ierr = PetscMemzero(vary,(a->mbs)*sizeof(PetscInt));CHKERRQ(ierr); 192218c64b6SSatish Balay for (i=0; i<ncols; i++) vary[icol[i]/bs]++; 193218c64b6SSatish Balay count = 0; 194218c64b6SSatish Balay for (i=0; i<a->mbs; i++) { 195634064b4SBarry Smith if (vary[i]!=0 && vary[i]!=bs) SETERRQ(PETSC_ERR_PLIB,"Internal error in PETSc"); 196218c64b6SSatish Balay if (vary[i]==bs) iary[count++] = i; 197218c64b6SSatish Balay } 198029af93fSBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,count,iary,&is2);CHKERRQ(ierr); 199218c64b6SSatish Balay ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr); 200218c64b6SSatish Balay ierr = ISRestoreIndices(iscol,&icol);CHKERRQ(ierr); 201606d414cSSatish Balay ierr = PetscFree(vary);CHKERRQ(ierr); 202218c64b6SSatish Balay 2034aa3045dSJed Brown ierr = MatGetSubMatrix_SeqBAIJ_Private(A,is1,is2,scall,B);CHKERRQ(ierr); 204218c64b6SSatish Balay ISDestroy(is1); 205218c64b6SSatish Balay ISDestroy(is2); 2063a40ed3dSBarry Smith PetscFunctionReturn(0); 207218c64b6SSatish Balay } 208218c64b6SSatish Balay 2094a2ae208SSatish Balay #undef __FUNCT__ 2104a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrices_SeqBAIJ" 211690b6cddSBarry Smith PetscErrorCode MatGetSubMatrices_SeqBAIJ(Mat A,PetscInt n,const IS irow[],const IS icol[],MatReuse scall,Mat *B[]) 212736121d4SSatish Balay { 2136849ba73SBarry Smith PetscErrorCode ierr; 214690b6cddSBarry Smith PetscInt i; 215736121d4SSatish Balay 2163a40ed3dSBarry Smith PetscFunctionBegin; 217736121d4SSatish Balay if (scall == MAT_INITIAL_MATRIX) { 21882502324SSatish Balay ierr = PetscMalloc((n+1)*sizeof(Mat),B);CHKERRQ(ierr); 219736121d4SSatish Balay } 220736121d4SSatish Balay 221736121d4SSatish Balay for (i=0; i<n; i++) { 2224aa3045dSJed Brown ierr = MatGetSubMatrix_SeqBAIJ(A,irow[i],icol[i],scall,&(*B)[i]);CHKERRQ(ierr); 223736121d4SSatish Balay } 2243a40ed3dSBarry Smith PetscFunctionReturn(0); 225736121d4SSatish Balay } 226218c64b6SSatish Balay 227218c64b6SSatish Balay 2282d61bbb3SSatish Balay /* -------------------------------------------------------*/ 2292d61bbb3SSatish Balay /* Should check that shapes of vectors and matrices match */ 2302d61bbb3SSatish Balay /* -------------------------------------------------------*/ 231d9eff348SSatish Balay #include "petscblaslapack.h" 2322d61bbb3SSatish Balay 2334a2ae208SSatish Balay #undef __FUNCT__ 2344a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_1" 235dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_1(Mat A,Vec xx,Vec zz) 2362d61bbb3SSatish Balay { 2372d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 238d9fead3dSBarry Smith PetscScalar *z,sum; 239d9fead3dSBarry Smith const PetscScalar *x; 240d9fead3dSBarry Smith const MatScalar *v; 2416849ba73SBarry Smith PetscErrorCode ierr; 2422162cab8SBarry Smith PetscInt mbs,i,n,nonzerorow=0; 2432162cab8SBarry Smith const PetscInt *idx,*ii,*ridx=PETSC_NULL; 24426e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 2452d61bbb3SSatish Balay 2462d61bbb3SSatish Balay PetscFunctionBegin; 247d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 2481ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 2492d61bbb3SSatish Balay 25026e093fcSHong Zhang if (usecprow){ 25126e093fcSHong Zhang mbs = a->compressedrow.nrows; 25226e093fcSHong Zhang ii = a->compressedrow.i; 2537b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 254a1c3900fSBarry Smith ierr = PetscMemzero(z,mbs*sizeof(PetscScalar));CHKERRQ(ierr); 25526e093fcSHong Zhang } else { 25626e093fcSHong Zhang mbs = a->mbs; 2572d61bbb3SSatish Balay ii = a->i; 25826e093fcSHong Zhang } 2592d61bbb3SSatish Balay 2602d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 261ee54c7eeSHong Zhang n = ii[1] - ii[0]; 262ee54c7eeSHong Zhang v = a->a + ii[0]; 263ee54c7eeSHong Zhang idx = a->j + ii[0]; 264ee54c7eeSHong Zhang ii++; 2652d61bbb3SSatish Balay sum = 0.0; 2662162cab8SBarry Smith PetscSparseDensePlusDot(sum,x,v,idx,n); 26726e093fcSHong Zhang if (usecprow){ 2687b2bb3b9SHong Zhang z[ridx[i]] = sum; 26926e093fcSHong Zhang } else { 270122f12eaSBarry Smith nonzerorow += (n>0); 2712d61bbb3SSatish Balay z[i] = sum; 2722d61bbb3SSatish Balay } 27326e093fcSHong Zhang } 274d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 2751ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 276dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*a->nz - nonzerorow);CHKERRQ(ierr); 2772d61bbb3SSatish Balay PetscFunctionReturn(0); 2782d61bbb3SSatish Balay } 2792d61bbb3SSatish Balay 2804a2ae208SSatish Balay #undef __FUNCT__ 2814a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_2" 282dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_2(Mat A,Vec xx,Vec zz) 2832d61bbb3SSatish Balay { 2842d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 285d9fead3dSBarry Smith PetscScalar *z = 0,sum1,sum2,*zarray; 286d9fead3dSBarry Smith const PetscScalar *x,*xb; 28787828ca2SBarry Smith PetscScalar x1,x2; 288d9fead3dSBarry Smith const MatScalar *v; 289dfbe8321SBarry Smith PetscErrorCode ierr; 29098c9bda7SSatish Balay PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL,nonzerorow=0; 29126e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 2922d61bbb3SSatish Balay 2932d61bbb3SSatish Balay PetscFunctionBegin; 294d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 29526e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 2962d61bbb3SSatish Balay 2972d61bbb3SSatish Balay idx = a->j; 2982d61bbb3SSatish Balay v = a->a; 29926e093fcSHong Zhang if (usecprow){ 30026e093fcSHong Zhang mbs = a->compressedrow.nrows; 30126e093fcSHong Zhang ii = a->compressedrow.i; 3027b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 30326e093fcSHong Zhang } else { 30426e093fcSHong Zhang mbs = a->mbs; 3052d61bbb3SSatish Balay ii = a->i; 30626e093fcSHong Zhang z = zarray; 30726e093fcSHong Zhang } 3082d61bbb3SSatish Balay 3092d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 3102d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 3112d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; 31298c9bda7SSatish Balay nonzerorow += (n>0); 3132d61bbb3SSatish Balay for (j=0; j<n; j++) { 3142d61bbb3SSatish Balay xb = x + 2*(*idx++); x1 = xb[0]; x2 = xb[1]; 3152d61bbb3SSatish Balay sum1 += v[0]*x1 + v[2]*x2; 3162d61bbb3SSatish Balay sum2 += v[1]*x1 + v[3]*x2; 3172d61bbb3SSatish Balay v += 4; 3182d61bbb3SSatish Balay } 3197b2bb3b9SHong Zhang if (usecprow) z = zarray + 2*ridx[i]; 3202d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; 32126e093fcSHong Zhang if (!usecprow) z += 2; 3222d61bbb3SSatish Balay } 323d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 32426e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 325dc0b31edSSatish Balay ierr = PetscLogFlops(8.0*a->nz - 2.0*nonzerorow);CHKERRQ(ierr); 3262d61bbb3SSatish Balay PetscFunctionReturn(0); 3272d61bbb3SSatish Balay } 3282d61bbb3SSatish Balay 3294a2ae208SSatish Balay #undef __FUNCT__ 3304a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_3" 331dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_3(Mat A,Vec xx,Vec zz) 3322d61bbb3SSatish Balay { 3332d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 334d9fead3dSBarry Smith PetscScalar *z = 0,sum1,sum2,sum3,x1,x2,x3,*zarray; 335d9fead3dSBarry Smith const PetscScalar *x,*xb; 336d9fead3dSBarry Smith const MatScalar *v; 337dfbe8321SBarry Smith PetscErrorCode ierr; 338028cd4eaSSatish Balay PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL,nonzerorow=0; 339028cd4eaSSatish Balay PetscTruth usecprow=a->compressedrow.use; 34026e093fcSHong Zhang 3412d61bbb3SSatish Balay 342b6410449SSatish Balay #if defined(PETSC_HAVE_PRAGMA_DISJOINT) 343fee21e36SBarry Smith #pragma disjoint(*v,*z,*xb) 344fee21e36SBarry Smith #endif 345fee21e36SBarry Smith 3462d61bbb3SSatish Balay PetscFunctionBegin; 347d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 34826e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 3492d61bbb3SSatish Balay 3502d61bbb3SSatish Balay idx = a->j; 3512d61bbb3SSatish Balay v = a->a; 35226e093fcSHong Zhang if (usecprow){ 35326e093fcSHong Zhang mbs = a->compressedrow.nrows; 35426e093fcSHong Zhang ii = a->compressedrow.i; 3557b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 35626e093fcSHong Zhang } else { 35726e093fcSHong Zhang mbs = a->mbs; 3582d61bbb3SSatish Balay ii = a->i; 35926e093fcSHong Zhang z = zarray; 36026e093fcSHong Zhang } 3612d61bbb3SSatish Balay 3622d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 3632d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 3642d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; 36598c9bda7SSatish Balay nonzerorow += (n>0); 3662d61bbb3SSatish Balay for (j=0; j<n; j++) { 3672d61bbb3SSatish Balay xb = x + 3*(*idx++); x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 3682d61bbb3SSatish Balay sum1 += v[0]*x1 + v[3]*x2 + v[6]*x3; 3692d61bbb3SSatish Balay sum2 += v[1]*x1 + v[4]*x2 + v[7]*x3; 3702d61bbb3SSatish Balay sum3 += v[2]*x1 + v[5]*x2 + v[8]*x3; 3712d61bbb3SSatish Balay v += 9; 3722d61bbb3SSatish Balay } 3737b2bb3b9SHong Zhang if (usecprow) z = zarray + 3*ridx[i]; 3742d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; 37526e093fcSHong Zhang if (!usecprow) z += 3; 3762d61bbb3SSatish Balay } 377d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 37826e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 379dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*a->nz - 3.0*nonzerorow);CHKERRQ(ierr); 3802d61bbb3SSatish Balay PetscFunctionReturn(0); 3812d61bbb3SSatish Balay } 3822d61bbb3SSatish Balay 3834a2ae208SSatish Balay #undef __FUNCT__ 3844a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_4" 385dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_4(Mat A,Vec xx,Vec zz) 3862d61bbb3SSatish Balay { 3872d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 388d9fead3dSBarry Smith PetscScalar *z = 0,sum1,sum2,sum3,sum4,x1,x2,x3,x4,*zarray; 389d9fead3dSBarry Smith const PetscScalar *x,*xb; 390d9fead3dSBarry Smith const MatScalar *v; 391dfbe8321SBarry Smith PetscErrorCode ierr; 39298c9bda7SSatish Balay PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL,nonzerorow=0; 39326e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 3942d61bbb3SSatish Balay 3952d61bbb3SSatish Balay PetscFunctionBegin; 396d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 39726e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 3982d61bbb3SSatish Balay 3992d61bbb3SSatish Balay idx = a->j; 4002d61bbb3SSatish Balay v = a->a; 40126e093fcSHong Zhang if (usecprow){ 40226e093fcSHong Zhang mbs = a->compressedrow.nrows; 40326e093fcSHong Zhang ii = a->compressedrow.i; 4047b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 40526e093fcSHong Zhang } else { 40626e093fcSHong Zhang mbs = a->mbs; 4072d61bbb3SSatish Balay ii = a->i; 40826e093fcSHong Zhang z = zarray; 40926e093fcSHong Zhang } 4102d61bbb3SSatish Balay 4112d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 4122d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 4132d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; 41498c9bda7SSatish Balay nonzerorow += (n>0); 4152d61bbb3SSatish Balay for (j=0; j<n; j++) { 4162d61bbb3SSatish Balay xb = x + 4*(*idx++); 4172d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 4182d61bbb3SSatish Balay sum1 += v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 4192d61bbb3SSatish Balay sum2 += v[1]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 4202d61bbb3SSatish Balay sum3 += v[2]*x1 + v[6]*x2 + v[10]*x3 + v[14]*x4; 4212d61bbb3SSatish Balay sum4 += v[3]*x1 + v[7]*x2 + v[11]*x3 + v[15]*x4; 4222d61bbb3SSatish Balay v += 16; 4232d61bbb3SSatish Balay } 4247b2bb3b9SHong Zhang if (usecprow) z = zarray + 4*ridx[i]; 4252d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; 42626e093fcSHong Zhang if (!usecprow) z += 4; 4272d61bbb3SSatish Balay } 428d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 42926e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 430dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*a->nz - 4.0*nonzerorow);CHKERRQ(ierr); 4312d61bbb3SSatish Balay PetscFunctionReturn(0); 4322d61bbb3SSatish Balay } 4332d61bbb3SSatish Balay 4344a2ae208SSatish Balay #undef __FUNCT__ 4354a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_5" 436dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_5(Mat A,Vec xx,Vec zz) 4372d61bbb3SSatish Balay { 4382d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 439d9fead3dSBarry Smith PetscScalar sum1,sum2,sum3,sum4,sum5,x1,x2,x3,x4,x5,*z = 0,*zarray; 440d9fead3dSBarry Smith const PetscScalar *xb,*x; 441d9fead3dSBarry Smith const MatScalar *v; 442dfbe8321SBarry Smith PetscErrorCode ierr; 44398c9bda7SSatish Balay PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL,nonzerorow=0; 44426e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 4452d61bbb3SSatish Balay 446433994e6SBarry Smith PetscFunctionBegin; 447d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 44826e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 4492d61bbb3SSatish Balay 4502d61bbb3SSatish Balay idx = a->j; 4512d61bbb3SSatish Balay v = a->a; 45226e093fcSHong Zhang if (usecprow){ 45326e093fcSHong Zhang mbs = a->compressedrow.nrows; 45426e093fcSHong Zhang ii = a->compressedrow.i; 4557b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 45626e093fcSHong Zhang } else { 45726e093fcSHong Zhang mbs = a->mbs; 4582d61bbb3SSatish Balay ii = a->i; 45926e093fcSHong Zhang z = zarray; 46026e093fcSHong Zhang } 4612d61bbb3SSatish Balay 4622d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 4632d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 4642d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; sum5 = 0.0; 46598c9bda7SSatish Balay nonzerorow += (n>0); 4662d61bbb3SSatish Balay for (j=0; j<n; j++) { 4672d61bbb3SSatish Balay xb = x + 5*(*idx++); 4682d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; 4692d61bbb3SSatish Balay sum1 += v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4 + v[20]*x5; 4702d61bbb3SSatish Balay sum2 += v[1]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4 + v[21]*x5; 4712d61bbb3SSatish Balay sum3 += v[2]*x1 + v[7]*x2 + v[12]*x3 + v[17]*x4 + v[22]*x5; 4722d61bbb3SSatish Balay sum4 += v[3]*x1 + v[8]*x2 + v[13]*x3 + v[18]*x4 + v[23]*x5; 4732d61bbb3SSatish Balay sum5 += v[4]*x1 + v[9]*x2 + v[14]*x3 + v[19]*x4 + v[24]*x5; 4742d61bbb3SSatish Balay v += 25; 4752d61bbb3SSatish Balay } 4767b2bb3b9SHong Zhang if (usecprow) z = zarray + 5*ridx[i]; 4772d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; 47826e093fcSHong Zhang if (!usecprow) z += 5; 4792d61bbb3SSatish Balay } 480d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 48126e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 482dc0b31edSSatish Balay ierr = PetscLogFlops(50.0*a->nz - 5.0*nonzerorow);CHKERRQ(ierr); 4832d61bbb3SSatish Balay PetscFunctionReturn(0); 4842d61bbb3SSatish Balay } 4852d61bbb3SSatish Balay 48615091d37SBarry Smith 4874a2ae208SSatish Balay #undef __FUNCT__ 4884a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_6" 489dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_6(Mat A,Vec xx,Vec zz) 49015091d37SBarry Smith { 49115091d37SBarry Smith Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 492d9fead3dSBarry Smith PetscScalar *z = 0,sum1,sum2,sum3,sum4,sum5,sum6; 493d9fead3dSBarry Smith const PetscScalar *x,*xb; 49426e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,*zarray; 495d9fead3dSBarry Smith const MatScalar *v; 496dfbe8321SBarry Smith PetscErrorCode ierr; 49798c9bda7SSatish Balay PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL,nonzerorow=0; 49826e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 49915091d37SBarry Smith 500433994e6SBarry Smith PetscFunctionBegin; 501d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 50226e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 50315091d37SBarry Smith 50415091d37SBarry Smith idx = a->j; 50515091d37SBarry Smith v = a->a; 50626e093fcSHong Zhang if (usecprow){ 50726e093fcSHong Zhang mbs = a->compressedrow.nrows; 50826e093fcSHong Zhang ii = a->compressedrow.i; 5097b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 51026e093fcSHong Zhang } else { 51126e093fcSHong Zhang mbs = a->mbs; 51215091d37SBarry Smith ii = a->i; 51326e093fcSHong Zhang z = zarray; 51426e093fcSHong Zhang } 51515091d37SBarry Smith 51615091d37SBarry Smith for (i=0; i<mbs; i++) { 51715091d37SBarry Smith n = ii[1] - ii[0]; ii++; 51815091d37SBarry Smith sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; sum5 = 0.0; sum6 = 0.0; 51998c9bda7SSatish Balay nonzerorow += (n>0); 52015091d37SBarry Smith for (j=0; j<n; j++) { 52115091d37SBarry Smith xb = x + 6*(*idx++); 52215091d37SBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; 52315091d37SBarry Smith sum1 += v[0]*x1 + v[6]*x2 + v[12]*x3 + v[18]*x4 + v[24]*x5 + v[30]*x6; 52415091d37SBarry Smith sum2 += v[1]*x1 + v[7]*x2 + v[13]*x3 + v[19]*x4 + v[25]*x5 + v[31]*x6; 52515091d37SBarry Smith sum3 += v[2]*x1 + v[8]*x2 + v[14]*x3 + v[20]*x4 + v[26]*x5 + v[32]*x6; 52615091d37SBarry Smith sum4 += v[3]*x1 + v[9]*x2 + v[15]*x3 + v[21]*x4 + v[27]*x5 + v[33]*x6; 52715091d37SBarry Smith sum5 += v[4]*x1 + v[10]*x2 + v[16]*x3 + v[22]*x4 + v[28]*x5 + v[34]*x6; 52815091d37SBarry Smith sum6 += v[5]*x1 + v[11]*x2 + v[17]*x3 + v[23]*x4 + v[29]*x5 + v[35]*x6; 52915091d37SBarry Smith v += 36; 53015091d37SBarry Smith } 5317b2bb3b9SHong Zhang if (usecprow) z = zarray + 6*ridx[i]; 53215091d37SBarry Smith z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; 53326e093fcSHong Zhang if (!usecprow) z += 6; 53415091d37SBarry Smith } 53515091d37SBarry Smith 536d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 53726e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 538dc0b31edSSatish Balay ierr = PetscLogFlops(72.0*a->nz - 6.0*nonzerorow);CHKERRQ(ierr); 53915091d37SBarry Smith PetscFunctionReturn(0); 54015091d37SBarry Smith } 5414a2ae208SSatish Balay #undef __FUNCT__ 5424a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_7" 543dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_7(Mat A,Vec xx,Vec zz) 5442d61bbb3SSatish Balay { 5452d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 546d9fead3dSBarry Smith PetscScalar *z = 0,sum1,sum2,sum3,sum4,sum5,sum6,sum7; 547d9fead3dSBarry Smith const PetscScalar *x,*xb; 54826e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,x7,*zarray; 549d9fead3dSBarry Smith const MatScalar *v; 550dfbe8321SBarry Smith PetscErrorCode ierr; 55198c9bda7SSatish Balay PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL,nonzerorow=0; 55226e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 5532d61bbb3SSatish Balay 554433994e6SBarry Smith PetscFunctionBegin; 555d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 55626e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 5572d61bbb3SSatish Balay 5582d61bbb3SSatish Balay idx = a->j; 5592d61bbb3SSatish Balay v = a->a; 56026e093fcSHong Zhang if (usecprow){ 56126e093fcSHong Zhang mbs = a->compressedrow.nrows; 56226e093fcSHong Zhang ii = a->compressedrow.i; 5637b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 56426e093fcSHong Zhang } else { 56526e093fcSHong Zhang mbs = a->mbs; 5662d61bbb3SSatish Balay ii = a->i; 56726e093fcSHong Zhang z = zarray; 56826e093fcSHong Zhang } 5692d61bbb3SSatish Balay 5702d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 5712d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 5722d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; sum5 = 0.0; sum6 = 0.0; sum7 = 0.0; 57398c9bda7SSatish Balay nonzerorow += (n>0); 5742d61bbb3SSatish Balay for (j=0; j<n; j++) { 5752d61bbb3SSatish Balay xb = x + 7*(*idx++); 5762d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; x7 = xb[6]; 5772d61bbb3SSatish Balay sum1 += v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4 + v[28]*x5 + v[35]*x6 + v[42]*x7; 5782d61bbb3SSatish Balay sum2 += v[1]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4 + v[29]*x5 + v[36]*x6 + v[43]*x7; 5792d61bbb3SSatish Balay sum3 += v[2]*x1 + v[9]*x2 + v[16]*x3 + v[23]*x4 + v[30]*x5 + v[37]*x6 + v[44]*x7; 5802d61bbb3SSatish Balay sum4 += v[3]*x1 + v[10]*x2 + v[17]*x3 + v[24]*x4 + v[31]*x5 + v[38]*x6 + v[45]*x7; 5812d61bbb3SSatish Balay sum5 += v[4]*x1 + v[11]*x2 + v[18]*x3 + v[25]*x4 + v[32]*x5 + v[39]*x6 + v[46]*x7; 5822d61bbb3SSatish Balay sum6 += v[5]*x1 + v[12]*x2 + v[19]*x3 + v[26]*x4 + v[33]*x5 + v[40]*x6 + v[47]*x7; 5832d61bbb3SSatish Balay sum7 += v[6]*x1 + v[13]*x2 + v[20]*x3 + v[27]*x4 + v[34]*x5 + v[41]*x6 + v[48]*x7; 5842d61bbb3SSatish Balay v += 49; 5852d61bbb3SSatish Balay } 5867b2bb3b9SHong Zhang if (usecprow) z = zarray + 7*ridx[i]; 5872d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; z[6] = sum7; 58826e093fcSHong Zhang if (!usecprow) z += 7; 5892d61bbb3SSatish Balay } 5902d61bbb3SSatish Balay 591d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 59226e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 593dc0b31edSSatish Balay ierr = PetscLogFlops(98.0*a->nz - 7.0*nonzerorow);CHKERRQ(ierr); 5942d61bbb3SSatish Balay PetscFunctionReturn(0); 5952d61bbb3SSatish Balay } 5962d61bbb3SSatish Balay 5973f1db9ecSBarry Smith /* 5983f1db9ecSBarry Smith This will not work with MatScalar == float because it calls the BLAS 5993f1db9ecSBarry Smith */ 6004a2ae208SSatish Balay #undef __FUNCT__ 6014a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_N" 602dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_N(Mat A,Vec xx,Vec zz) 6032d61bbb3SSatish Balay { 6042d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 605dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,*work,*workt,*zarray; 6063f1db9ecSBarry Smith MatScalar *v; 607dfbe8321SBarry Smith PetscErrorCode ierr; 608d0f46423SBarry Smith PetscInt mbs=a->mbs,i,*idx,*ii,bs=A->rmap->bs,j,n,bs2=a->bs2; 60998c9bda7SSatish Balay PetscInt ncols,k,*ridx=PETSC_NULL,nonzerorow=0; 61026e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 6112d61bbb3SSatish Balay 6122d61bbb3SSatish Balay PetscFunctionBegin; 6131ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 61426e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 6152d61bbb3SSatish Balay 6162d61bbb3SSatish Balay idx = a->j; 6172d61bbb3SSatish Balay v = a->a; 61826e093fcSHong Zhang if (usecprow){ 61926e093fcSHong Zhang mbs = a->compressedrow.nrows; 62026e093fcSHong Zhang ii = a->compressedrow.i; 6217b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 62226e093fcSHong Zhang } else { 62326e093fcSHong Zhang mbs = a->mbs; 6242d61bbb3SSatish Balay ii = a->i; 62526e093fcSHong Zhang z = zarray; 62626e093fcSHong Zhang } 627218c64b6SSatish Balay 6282d61bbb3SSatish Balay if (!a->mult_work) { 629d0f46423SBarry Smith k = PetscMax(A->rmap->n,A->cmap->n); 63087828ca2SBarry Smith ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 6312d61bbb3SSatish Balay } 6322d61bbb3SSatish Balay work = a->mult_work; 6332d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 6342d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 6352d61bbb3SSatish Balay ncols = n*bs; 6362d61bbb3SSatish Balay workt = work; 63798c9bda7SSatish Balay nonzerorow += (n>0); 6382d61bbb3SSatish Balay for (j=0; j<n; j++) { 6392d61bbb3SSatish Balay xb = x + bs*(*idx++); 6402d61bbb3SSatish Balay for (k=0; k<bs; k++) workt[k] = xb[k]; 6412d61bbb3SSatish Balay workt += bs; 6422d61bbb3SSatish Balay } 6437b2bb3b9SHong Zhang if (usecprow) z = zarray + bs*ridx[i]; 644737d121aSSatish Balay Kernel_w_gets_Ar_times_v(bs,ncols,work,v,z); 64571044d3cSBarry Smith /* BLASgemv_("N",&bs,&ncols,&_DOne,v,&bs,work,&_One,&_DZero,z,&_One); */ 6462d61bbb3SSatish Balay v += n*bs2; 64726e093fcSHong Zhang if (!usecprow) z += bs; 6482d61bbb3SSatish Balay } 6491ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 65026e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 651dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*a->nz*bs2 - bs*nonzerorow);CHKERRQ(ierr); 6522d61bbb3SSatish Balay PetscFunctionReturn(0); 6532d61bbb3SSatish Balay } 6542d61bbb3SSatish Balay 6556a65c766SHong Zhang extern PetscErrorCode VecCopy_Seq(Vec,Vec); 6564a2ae208SSatish Balay #undef __FUNCT__ 6574a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_1" 658dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_1(Mat A,Vec xx,Vec yy,Vec zz) 6592d61bbb3SSatish Balay { 6602d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 661122f12eaSBarry Smith const PetscScalar *x; 662122f12eaSBarry Smith PetscScalar *y,*z,sum; 663122f12eaSBarry Smith const MatScalar *v; 664dfbe8321SBarry Smith PetscErrorCode ierr; 665122f12eaSBarry Smith PetscInt mbs=a->mbs,i,n,*ridx=PETSC_NULL,nonzerorow=0; 666122f12eaSBarry Smith const PetscInt *idx,*ii; 66726e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 6682d61bbb3SSatish Balay 6692d61bbb3SSatish Balay PetscFunctionBegin; 670122f12eaSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 671122f12eaSBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 6722e8a6d31SBarry Smith if (zz != yy) { 673122f12eaSBarry Smith ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 6742e8a6d31SBarry Smith } else { 675122f12eaSBarry Smith z = y; 6762e8a6d31SBarry Smith } 6772d61bbb3SSatish Balay 6782d61bbb3SSatish Balay idx = a->j; 6792d61bbb3SSatish Balay v = a->a; 68026e093fcSHong Zhang if (usecprow){ 6814eb6d288SHong Zhang if (zz != yy){ 682122f12eaSBarry Smith ierr = PetscMemcpy(z,y,mbs*sizeof(PetscScalar));CHKERRQ(ierr); 6834eb6d288SHong Zhang } 68426e093fcSHong Zhang mbs = a->compressedrow.nrows; 68526e093fcSHong Zhang ii = a->compressedrow.i; 6867b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 68726e093fcSHong Zhang } else { 6882d61bbb3SSatish Balay ii = a->i; 68926e093fcSHong Zhang } 6902d61bbb3SSatish Balay 6912d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 692122f12eaSBarry Smith n = ii[1] - ii[0]; 693122f12eaSBarry Smith ii++; 69426e093fcSHong Zhang if (!usecprow){ 695122f12eaSBarry Smith nonzerorow += (n>0); 696122f12eaSBarry Smith sum = y[i]; 697122f12eaSBarry Smith } else { 698122f12eaSBarry Smith sum = y[ridx[i]]; 699122f12eaSBarry Smith } 700122f12eaSBarry Smith PetscSparseDensePlusDot(sum,x,v,idx,n); 701122f12eaSBarry Smith v += n; 702122f12eaSBarry Smith idx += n; 703122f12eaSBarry Smith if (usecprow){ 704122f12eaSBarry Smith z[ridx[i]] = sum; 705122f12eaSBarry Smith } else { 706122f12eaSBarry Smith z[i] = sum; 70726e093fcSHong Zhang } 7082d61bbb3SSatish Balay } 709122f12eaSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 710122f12eaSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 7112e8a6d31SBarry Smith if (zz != yy) { 712122f12eaSBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 7132e8a6d31SBarry Smith } 714122f12eaSBarry Smith ierr = PetscLogFlops(2.0*a->nz - nonzerorow);CHKERRQ(ierr); 7152d61bbb3SSatish Balay PetscFunctionReturn(0); 7162d61bbb3SSatish Balay } 7172d61bbb3SSatish Balay 7184a2ae208SSatish Balay #undef __FUNCT__ 7194a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_2" 720dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 7212d61bbb3SSatish Balay { 7222d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 723dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2; 72426e093fcSHong Zhang PetscScalar x1,x2,*yarray,*zarray; 7253f1db9ecSBarry Smith MatScalar *v; 726dfbe8321SBarry Smith PetscErrorCode ierr; 7274eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 72826e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 7292d61bbb3SSatish Balay 7302d61bbb3SSatish Balay PetscFunctionBegin; 7311ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 73226e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 7332e8a6d31SBarry Smith if (zz != yy) { 73426e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 7352e8a6d31SBarry Smith } else { 73626e093fcSHong Zhang zarray = yarray; 7372e8a6d31SBarry Smith } 7382d61bbb3SSatish Balay 7392d61bbb3SSatish Balay idx = a->j; 7402d61bbb3SSatish Balay v = a->a; 74126e093fcSHong Zhang if (usecprow){ 7424eb6d288SHong Zhang if (zz != yy){ 7434eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,2*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 7444eb6d288SHong Zhang } 74526e093fcSHong Zhang mbs = a->compressedrow.nrows; 74626e093fcSHong Zhang ii = a->compressedrow.i; 7477b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 7484eb6d288SHong Zhang if (zz != yy){ 7494eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,a->mbs*sizeof(PetscScalar));CHKERRQ(ierr); 7504eb6d288SHong Zhang } 75126e093fcSHong Zhang } else { 7522d61bbb3SSatish Balay ii = a->i; 75326e093fcSHong Zhang y = yarray; 75426e093fcSHong Zhang z = zarray; 75526e093fcSHong Zhang } 7562d61bbb3SSatish Balay 7572d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 7582d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 75926e093fcSHong Zhang if (usecprow){ 7607b2bb3b9SHong Zhang z = zarray + 2*ridx[i]; 7617b2bb3b9SHong Zhang y = yarray + 2*ridx[i]; 76226e093fcSHong Zhang } 7632d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; 7642d61bbb3SSatish Balay for (j=0; j<n; j++) { 7652d61bbb3SSatish Balay xb = x + 2*(*idx++); x1 = xb[0]; x2 = xb[1]; 7662d61bbb3SSatish Balay sum1 += v[0]*x1 + v[2]*x2; 7672d61bbb3SSatish Balay sum2 += v[1]*x1 + v[3]*x2; 7682d61bbb3SSatish Balay v += 4; 7692d61bbb3SSatish Balay } 7702d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; 77126e093fcSHong Zhang if (!usecprow){ 7722d61bbb3SSatish Balay z += 2; y += 2; 7732d61bbb3SSatish Balay } 77426e093fcSHong Zhang } 7751ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 77626e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 7772e8a6d31SBarry Smith if (zz != yy) { 77826e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 7792e8a6d31SBarry Smith } 780dc0b31edSSatish Balay ierr = PetscLogFlops(4.0*a->nz);CHKERRQ(ierr); 7812d61bbb3SSatish Balay PetscFunctionReturn(0); 7822d61bbb3SSatish Balay } 7832d61bbb3SSatish Balay 7844a2ae208SSatish Balay #undef __FUNCT__ 7854a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_3" 786dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 7872d61bbb3SSatish Balay { 7882d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 789dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,x1,x2,x3,*yarray,*zarray; 7903f1db9ecSBarry Smith MatScalar *v; 791dfbe8321SBarry Smith PetscErrorCode ierr; 7924eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 79326e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 7942d61bbb3SSatish Balay 7952d61bbb3SSatish Balay PetscFunctionBegin; 7961ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 79726e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 7982e8a6d31SBarry Smith if (zz != yy) { 79926e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 8002e8a6d31SBarry Smith } else { 80126e093fcSHong Zhang zarray = yarray; 8022e8a6d31SBarry Smith } 8032d61bbb3SSatish Balay 8042d61bbb3SSatish Balay idx = a->j; 8052d61bbb3SSatish Balay v = a->a; 80626e093fcSHong Zhang if (usecprow){ 8074eb6d288SHong Zhang if (zz != yy){ 8084eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,3*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 8094eb6d288SHong Zhang } 81026e093fcSHong Zhang mbs = a->compressedrow.nrows; 81126e093fcSHong Zhang ii = a->compressedrow.i; 8127b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 81326e093fcSHong Zhang } else { 8142d61bbb3SSatish Balay ii = a->i; 81526e093fcSHong Zhang y = yarray; 81626e093fcSHong Zhang z = zarray; 81726e093fcSHong Zhang } 8182d61bbb3SSatish Balay 8192d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 8202d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 82126e093fcSHong Zhang if (usecprow){ 8227b2bb3b9SHong Zhang z = zarray + 3*ridx[i]; 8237b2bb3b9SHong Zhang y = yarray + 3*ridx[i]; 82426e093fcSHong Zhang } 8252d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; 8262d61bbb3SSatish Balay for (j=0; j<n; j++) { 8272d61bbb3SSatish Balay xb = x + 3*(*idx++); x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 8282d61bbb3SSatish Balay sum1 += v[0]*x1 + v[3]*x2 + v[6]*x3; 8292d61bbb3SSatish Balay sum2 += v[1]*x1 + v[4]*x2 + v[7]*x3; 8302d61bbb3SSatish Balay sum3 += v[2]*x1 + v[5]*x2 + v[8]*x3; 8312d61bbb3SSatish Balay v += 9; 8322d61bbb3SSatish Balay } 8332d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; 83426e093fcSHong Zhang if (!usecprow){ 8352d61bbb3SSatish Balay z += 3; y += 3; 8362d61bbb3SSatish Balay } 83726e093fcSHong Zhang } 8381ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 83926e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 8402e8a6d31SBarry Smith if (zz != yy) { 84126e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 8422e8a6d31SBarry Smith } 843dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*a->nz);CHKERRQ(ierr); 8442d61bbb3SSatish Balay PetscFunctionReturn(0); 8452d61bbb3SSatish Balay } 8462d61bbb3SSatish Balay 8474a2ae208SSatish Balay #undef __FUNCT__ 8484a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_4" 849dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 8502d61bbb3SSatish Balay { 8512d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 852dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,x1,x2,x3,x4,*yarray,*zarray; 8533f1db9ecSBarry Smith MatScalar *v; 854dfbe8321SBarry Smith PetscErrorCode ierr; 8554eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 85626e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 8572d61bbb3SSatish Balay 8582d61bbb3SSatish Balay PetscFunctionBegin; 8591ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 86026e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 8612e8a6d31SBarry Smith if (zz != yy) { 86226e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 8632e8a6d31SBarry Smith } else { 86426e093fcSHong Zhang zarray = yarray; 8652e8a6d31SBarry Smith } 8662d61bbb3SSatish Balay 8672d61bbb3SSatish Balay idx = a->j; 8682d61bbb3SSatish Balay v = a->a; 86926e093fcSHong Zhang if (usecprow){ 8704eb6d288SHong Zhang if (zz != yy){ 8714eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,4*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 8724eb6d288SHong Zhang } 87326e093fcSHong Zhang mbs = a->compressedrow.nrows; 87426e093fcSHong Zhang ii = a->compressedrow.i; 8757b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 87626e093fcSHong Zhang } else { 8772d61bbb3SSatish Balay ii = a->i; 87826e093fcSHong Zhang y = yarray; 87926e093fcSHong Zhang z = zarray; 88026e093fcSHong Zhang } 8812d61bbb3SSatish Balay 8822d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 8832d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 88426e093fcSHong Zhang if (usecprow){ 8857b2bb3b9SHong Zhang z = zarray + 4*ridx[i]; 8867b2bb3b9SHong Zhang y = yarray + 4*ridx[i]; 88726e093fcSHong Zhang } 8882d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; 8892d61bbb3SSatish Balay for (j=0; j<n; j++) { 8902d61bbb3SSatish Balay xb = x + 4*(*idx++); 8912d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 8922d61bbb3SSatish Balay sum1 += v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 8932d61bbb3SSatish Balay sum2 += v[1]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 8942d61bbb3SSatish Balay sum3 += v[2]*x1 + v[6]*x2 + v[10]*x3 + v[14]*x4; 8952d61bbb3SSatish Balay sum4 += v[3]*x1 + v[7]*x2 + v[11]*x3 + v[15]*x4; 8962d61bbb3SSatish Balay v += 16; 8972d61bbb3SSatish Balay } 8982d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; 89926e093fcSHong Zhang if (!usecprow){ 9002d61bbb3SSatish Balay z += 4; y += 4; 9012d61bbb3SSatish Balay } 90226e093fcSHong Zhang } 9031ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 90426e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 9052e8a6d31SBarry Smith if (zz != yy) { 90626e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 9072e8a6d31SBarry Smith } 908dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*a->nz);CHKERRQ(ierr); 9092d61bbb3SSatish Balay PetscFunctionReturn(0); 9102d61bbb3SSatish Balay } 9112d61bbb3SSatish Balay 9124a2ae208SSatish Balay #undef __FUNCT__ 9134a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_5" 914dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 9152d61bbb3SSatish Balay { 9162d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 917dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,x1,x2,x3,x4,x5; 91826e093fcSHong Zhang PetscScalar *yarray,*zarray; 9193f1db9ecSBarry Smith MatScalar *v; 920dfbe8321SBarry Smith PetscErrorCode ierr; 9214eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 92226e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 9232d61bbb3SSatish Balay 9242d61bbb3SSatish Balay PetscFunctionBegin; 9251ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 92626e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 9272e8a6d31SBarry Smith if (zz != yy) { 92826e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 9292e8a6d31SBarry Smith } else { 93026e093fcSHong Zhang zarray = yarray; 9312e8a6d31SBarry Smith } 9322d61bbb3SSatish Balay 9332d61bbb3SSatish Balay idx = a->j; 9342d61bbb3SSatish Balay v = a->a; 93526e093fcSHong Zhang if (usecprow){ 9364eb6d288SHong Zhang if (zz != yy){ 9374eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,5*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 9384eb6d288SHong Zhang } 93926e093fcSHong Zhang mbs = a->compressedrow.nrows; 94026e093fcSHong Zhang ii = a->compressedrow.i; 9417b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 94226e093fcSHong Zhang } else { 9432d61bbb3SSatish Balay ii = a->i; 94426e093fcSHong Zhang y = yarray; 94526e093fcSHong Zhang z = zarray; 94626e093fcSHong Zhang } 9472d61bbb3SSatish Balay 9482d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 9492d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 95026e093fcSHong Zhang if (usecprow){ 9517b2bb3b9SHong Zhang z = zarray + 5*ridx[i]; 9527b2bb3b9SHong Zhang y = yarray + 5*ridx[i]; 95326e093fcSHong Zhang } 9542d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; sum5 = y[4]; 9552d61bbb3SSatish Balay for (j=0; j<n; j++) { 9562d61bbb3SSatish Balay xb = x + 5*(*idx++); 9572d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; 9582d61bbb3SSatish Balay sum1 += v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4 + v[20]*x5; 9592d61bbb3SSatish Balay sum2 += v[1]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4 + v[21]*x5; 9602d61bbb3SSatish Balay sum3 += v[2]*x1 + v[7]*x2 + v[12]*x3 + v[17]*x4 + v[22]*x5; 9612d61bbb3SSatish Balay sum4 += v[3]*x1 + v[8]*x2 + v[13]*x3 + v[18]*x4 + v[23]*x5; 9622d61bbb3SSatish Balay sum5 += v[4]*x1 + v[9]*x2 + v[14]*x3 + v[19]*x4 + v[24]*x5; 9632d61bbb3SSatish Balay v += 25; 9642d61bbb3SSatish Balay } 9652d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; 96626e093fcSHong Zhang if (!usecprow){ 9672d61bbb3SSatish Balay z += 5; y += 5; 9682d61bbb3SSatish Balay } 96926e093fcSHong Zhang } 9701ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 97126e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 9722e8a6d31SBarry Smith if (zz != yy) { 97326e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 9742e8a6d31SBarry Smith } 975dc0b31edSSatish Balay ierr = PetscLogFlops(50.0*a->nz);CHKERRQ(ierr); 9762d61bbb3SSatish Balay PetscFunctionReturn(0); 9772d61bbb3SSatish Balay } 9784a2ae208SSatish Balay #undef __FUNCT__ 9794a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_6" 980dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 98115091d37SBarry Smith { 98215091d37SBarry Smith Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 983dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,sum6; 98426e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,*yarray,*zarray; 98515091d37SBarry Smith MatScalar *v; 986dfbe8321SBarry Smith PetscErrorCode ierr; 9874eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 98826e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 98915091d37SBarry Smith 99015091d37SBarry Smith PetscFunctionBegin; 9911ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 99226e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 99315091d37SBarry Smith if (zz != yy) { 99426e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 99515091d37SBarry Smith } else { 99626e093fcSHong Zhang zarray = yarray; 99715091d37SBarry Smith } 99815091d37SBarry Smith 99915091d37SBarry Smith idx = a->j; 100015091d37SBarry Smith v = a->a; 100126e093fcSHong Zhang if (usecprow){ 10024eb6d288SHong Zhang if (zz != yy){ 10034eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,6*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 10044eb6d288SHong Zhang } 100526e093fcSHong Zhang mbs = a->compressedrow.nrows; 100626e093fcSHong Zhang ii = a->compressedrow.i; 10077b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 100826e093fcSHong Zhang } else { 100915091d37SBarry Smith ii = a->i; 101026e093fcSHong Zhang y = yarray; 101126e093fcSHong Zhang z = zarray; 101226e093fcSHong Zhang } 101315091d37SBarry Smith 101415091d37SBarry Smith for (i=0; i<mbs; i++) { 101515091d37SBarry Smith n = ii[1] - ii[0]; ii++; 101626e093fcSHong Zhang if (usecprow){ 10177b2bb3b9SHong Zhang z = zarray + 6*ridx[i]; 10187b2bb3b9SHong Zhang y = yarray + 6*ridx[i]; 101926e093fcSHong Zhang } 102015091d37SBarry Smith sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; sum5 = y[4]; sum6 = y[5]; 102115091d37SBarry Smith for (j=0; j<n; j++) { 10223b95cb0eSSatish Balay xb = x + 6*(*idx++); 102315091d37SBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; 102415091d37SBarry Smith sum1 += v[0]*x1 + v[6]*x2 + v[12]*x3 + v[18]*x4 + v[24]*x5 + v[30]*x6; 102515091d37SBarry Smith sum2 += v[1]*x1 + v[7]*x2 + v[13]*x3 + v[19]*x4 + v[25]*x5 + v[31]*x6; 102615091d37SBarry Smith sum3 += v[2]*x1 + v[8]*x2 + v[14]*x3 + v[20]*x4 + v[26]*x5 + v[32]*x6; 102715091d37SBarry Smith sum4 += v[3]*x1 + v[9]*x2 + v[15]*x3 + v[21]*x4 + v[27]*x5 + v[33]*x6; 102815091d37SBarry Smith sum5 += v[4]*x1 + v[10]*x2 + v[16]*x3 + v[22]*x4 + v[28]*x5 + v[34]*x6; 102915091d37SBarry Smith sum6 += v[5]*x1 + v[11]*x2 + v[17]*x3 + v[23]*x4 + v[29]*x5 + v[35]*x6; 103015091d37SBarry Smith v += 36; 103115091d37SBarry Smith } 103215091d37SBarry Smith z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; 103326e093fcSHong Zhang if (!usecprow){ 103415091d37SBarry Smith z += 6; y += 6; 103515091d37SBarry Smith } 103626e093fcSHong Zhang } 10371ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 103826e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 103915091d37SBarry Smith if (zz != yy) { 104026e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 104115091d37SBarry Smith } 1042dc0b31edSSatish Balay ierr = PetscLogFlops(72.0*a->nz);CHKERRQ(ierr); 104315091d37SBarry Smith PetscFunctionReturn(0); 104415091d37SBarry Smith } 10452d61bbb3SSatish Balay 10464a2ae208SSatish Balay #undef __FUNCT__ 10474a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_7" 1048dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 10492d61bbb3SSatish Balay { 10502d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1051dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,sum6,sum7; 105226e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,x7,*yarray,*zarray; 10533f1db9ecSBarry Smith MatScalar *v; 1054dfbe8321SBarry Smith PetscErrorCode ierr; 10557b2bb3b9SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 105626e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 10572d61bbb3SSatish Balay 10582d61bbb3SSatish Balay PetscFunctionBegin; 10591ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 106026e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 10612e8a6d31SBarry Smith if (zz != yy) { 106226e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 10632e8a6d31SBarry Smith } else { 106426e093fcSHong Zhang zarray = yarray; 10652e8a6d31SBarry Smith } 10662d61bbb3SSatish Balay 10672d61bbb3SSatish Balay idx = a->j; 10682d61bbb3SSatish Balay v = a->a; 106926e093fcSHong Zhang if (usecprow){ 10704eb6d288SHong Zhang if (zz != yy){ 10714eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,7*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 10724eb6d288SHong Zhang } 107326e093fcSHong Zhang mbs = a->compressedrow.nrows; 107426e093fcSHong Zhang ii = a->compressedrow.i; 10757b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 107626e093fcSHong Zhang } else { 10772d61bbb3SSatish Balay ii = a->i; 107826e093fcSHong Zhang y = yarray; 107926e093fcSHong Zhang z = zarray; 108026e093fcSHong Zhang } 10812d61bbb3SSatish Balay 10822d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 10832d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 108426e093fcSHong Zhang if (usecprow){ 10857b2bb3b9SHong Zhang z = zarray + 7*ridx[i]; 10867b2bb3b9SHong Zhang y = yarray + 7*ridx[i]; 108726e093fcSHong Zhang } 10882d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; sum5 = y[4]; sum6 = y[5]; sum7 = y[6]; 10892d61bbb3SSatish Balay for (j=0; j<n; j++) { 10902d61bbb3SSatish Balay xb = x + 7*(*idx++); 10912d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; x7 = xb[6]; 10922d61bbb3SSatish Balay sum1 += v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4 + v[28]*x5 + v[35]*x6 + v[42]*x7; 10932d61bbb3SSatish Balay sum2 += v[1]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4 + v[29]*x5 + v[36]*x6 + v[43]*x7; 10942d61bbb3SSatish Balay sum3 += v[2]*x1 + v[9]*x2 + v[16]*x3 + v[23]*x4 + v[30]*x5 + v[37]*x6 + v[44]*x7; 10952d61bbb3SSatish Balay sum4 += v[3]*x1 + v[10]*x2 + v[17]*x3 + v[24]*x4 + v[31]*x5 + v[38]*x6 + v[45]*x7; 10962d61bbb3SSatish Balay sum5 += v[4]*x1 + v[11]*x2 + v[18]*x3 + v[25]*x4 + v[32]*x5 + v[39]*x6 + v[46]*x7; 10972d61bbb3SSatish Balay sum6 += v[5]*x1 + v[12]*x2 + v[19]*x3 + v[26]*x4 + v[33]*x5 + v[40]*x6 + v[47]*x7; 10982d61bbb3SSatish Balay sum7 += v[6]*x1 + v[13]*x2 + v[20]*x3 + v[27]*x4 + v[34]*x5 + v[41]*x6 + v[48]*x7; 10992d61bbb3SSatish Balay v += 49; 11002d61bbb3SSatish Balay } 11012d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; z[6] = sum7; 110226e093fcSHong Zhang if (!usecprow){ 11032d61bbb3SSatish Balay z += 7; y += 7; 11042d61bbb3SSatish Balay } 110526e093fcSHong Zhang } 11061ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 110726e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 11082e8a6d31SBarry Smith if (zz != yy) { 110926e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 11102e8a6d31SBarry Smith } 1111dc0b31edSSatish Balay ierr = PetscLogFlops(98.0*a->nz);CHKERRQ(ierr); 11122d61bbb3SSatish Balay PetscFunctionReturn(0); 11132d61bbb3SSatish Balay } 1114218c64b6SSatish Balay 11154a2ae208SSatish Balay #undef __FUNCT__ 11164a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_N" 1117dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_N(Mat A,Vec xx,Vec yy,Vec zz) 11182d61bbb3SSatish Balay { 11192d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1120bba805e6SBarry Smith PetscScalar *x,*z = 0,*xb,*work,*workt,*zarray; 11213f1db9ecSBarry Smith MatScalar *v; 11226849ba73SBarry Smith PetscErrorCode ierr; 1123d0f46423SBarry Smith PetscInt mbs,i,*idx,*ii,bs=A->rmap->bs,j,n,bs2=a->bs2; 11247b2bb3b9SHong Zhang PetscInt ncols,k,*ridx=PETSC_NULL; 112526e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 1126218c64b6SSatish Balay 11272d61bbb3SSatish Balay PetscFunctionBegin; 11286a65c766SHong Zhang ierr = VecCopy_Seq(yy,zz);CHKERRQ(ierr); 11291ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 113026e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 11312d61bbb3SSatish Balay 11322d61bbb3SSatish Balay idx = a->j; 11332d61bbb3SSatish Balay v = a->a; 113426e093fcSHong Zhang if (usecprow){ 113526e093fcSHong Zhang mbs = a->compressedrow.nrows; 113626e093fcSHong Zhang ii = a->compressedrow.i; 11377b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 113826e093fcSHong Zhang } else { 113926e093fcSHong Zhang mbs = a->mbs; 11402d61bbb3SSatish Balay ii = a->i; 114126e093fcSHong Zhang z = zarray; 114226e093fcSHong Zhang } 11432d61bbb3SSatish Balay 11442d61bbb3SSatish Balay if (!a->mult_work) { 1145d0f46423SBarry Smith k = PetscMax(A->rmap->n,A->cmap->n); 114687828ca2SBarry Smith ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 11472d61bbb3SSatish Balay } 11482d61bbb3SSatish Balay work = a->mult_work; 11492d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 11502d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 11512d61bbb3SSatish Balay ncols = n*bs; 11522d61bbb3SSatish Balay workt = work; 11532d61bbb3SSatish Balay for (j=0; j<n; j++) { 11542d61bbb3SSatish Balay xb = x + bs*(*idx++); 11552d61bbb3SSatish Balay for (k=0; k<bs; k++) workt[k] = xb[k]; 11562d61bbb3SSatish Balay workt += bs; 11572d61bbb3SSatish Balay } 11587b2bb3b9SHong Zhang if (usecprow) z = zarray + bs*ridx[i]; 11593f1db9ecSBarry Smith Kernel_w_gets_w_plus_Ar_times_v(bs,ncols,work,v,z); 116071044d3cSBarry Smith /* BLASgemv_("N",&bs,&ncols,&_DOne,v,&bs,work,&_One,&_DOne,z,&_One); */ 11612d61bbb3SSatish Balay v += n*bs2; 116226e093fcSHong Zhang if (!usecprow){ 11632d61bbb3SSatish Balay z += bs; 11642d61bbb3SSatish Balay } 116526e093fcSHong Zhang } 11661ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 116726e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 1168dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*a->nz*bs2);CHKERRQ(ierr); 11692d61bbb3SSatish Balay PetscFunctionReturn(0); 11702d61bbb3SSatish Balay } 11712d61bbb3SSatish Balay 11724a2ae208SSatish Balay #undef __FUNCT__ 1173*547795f9SHong Zhang #define __FUNCT__ "MatMultHermitianTranspose_SeqBAIJ" 1174*547795f9SHong Zhang PetscErrorCode MatMultHermitianTranspose_SeqBAIJ(Mat A,Vec xx,Vec zz) 1175*547795f9SHong Zhang { 1176*547795f9SHong Zhang PetscScalar zero = 0.0; 1177*547795f9SHong Zhang PetscErrorCode ierr; 1178*547795f9SHong Zhang 1179*547795f9SHong Zhang PetscFunctionBegin; 1180*547795f9SHong Zhang ierr = VecSet(zz,zero);CHKERRQ(ierr); 1181*547795f9SHong Zhang ierr = MatMultHermitianTransposeAdd_SeqBAIJ(A,xx,zz,zz);CHKERRQ(ierr); 1182*547795f9SHong Zhang PetscFunctionReturn(0); 1183*547795f9SHong Zhang } 1184*547795f9SHong Zhang 1185*547795f9SHong Zhang #undef __FUNCT__ 11864a2ae208SSatish Balay #define __FUNCT__ "MatMultTranspose_SeqBAIJ" 1187dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqBAIJ(Mat A,Vec xx,Vec zz) 11882d61bbb3SSatish Balay { 11893447b6efSHong Zhang PetscScalar zero = 0.0; 11906849ba73SBarry Smith PetscErrorCode ierr; 11912d61bbb3SSatish Balay 11922d61bbb3SSatish Balay PetscFunctionBegin; 11932dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 11943447b6efSHong Zhang ierr = MatMultTransposeAdd_SeqBAIJ(A,xx,zz,zz);CHKERRQ(ierr); 11952d61bbb3SSatish Balay PetscFunctionReturn(0); 11962d61bbb3SSatish Balay } 11972d61bbb3SSatish Balay 11984a2ae208SSatish Balay #undef __FUNCT__ 1199*547795f9SHong Zhang #define __FUNCT__ "MatMultHermitianTransposeAdd_SeqBAIJ" 1200*547795f9SHong Zhang PetscErrorCode MatMultHermitianTransposeAdd_SeqBAIJ(Mat A,Vec xx,Vec yy,Vec zz) 1201*547795f9SHong Zhang 1202*547795f9SHong Zhang { 1203*547795f9SHong Zhang Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1204*547795f9SHong Zhang PetscScalar *zb,*x,*z,*xb = 0,x1,x2,x3,x4,x5; 1205*547795f9SHong Zhang MatScalar *v; 1206*547795f9SHong Zhang PetscErrorCode ierr; 1207*547795f9SHong Zhang PetscInt mbs,i,*idx,*ii,rval,bs=A->rmap->bs,j,n,bs2=a->bs2,*ib,*ridx=PETSC_NULL; 1208*547795f9SHong Zhang Mat_CompressedRow cprow = a->compressedrow; 1209*547795f9SHong Zhang PetscTruth usecprow=cprow.use; 1210*547795f9SHong Zhang 1211*547795f9SHong Zhang PetscFunctionBegin; 1212*547795f9SHong Zhang if (yy != zz) { ierr = VecCopy_Seq(yy,zz);CHKERRQ(ierr); } 1213*547795f9SHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1214*547795f9SHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 1215*547795f9SHong Zhang 1216*547795f9SHong Zhang idx = a->j; 1217*547795f9SHong Zhang v = a->a; 1218*547795f9SHong Zhang if (usecprow){ 1219*547795f9SHong Zhang mbs = cprow.nrows; 1220*547795f9SHong Zhang ii = cprow.i; 1221*547795f9SHong Zhang ridx = cprow.rindex; 1222*547795f9SHong Zhang } else { 1223*547795f9SHong Zhang mbs=a->mbs; 1224*547795f9SHong Zhang ii = a->i; 1225*547795f9SHong Zhang xb = x; 1226*547795f9SHong Zhang } 1227*547795f9SHong Zhang 1228*547795f9SHong Zhang switch (bs) { 1229*547795f9SHong Zhang case 1: 1230*547795f9SHong Zhang for (i=0; i<mbs; i++) { 1231*547795f9SHong Zhang if (usecprow) xb = x + ridx[i]; 1232*547795f9SHong Zhang x1 = xb[0]; 1233*547795f9SHong Zhang ib = idx + ii[0]; 1234*547795f9SHong Zhang n = ii[1] - ii[0]; ii++; 1235*547795f9SHong Zhang for (j=0; j<n; j++) { 1236*547795f9SHong Zhang rval = ib[j]; 1237*547795f9SHong Zhang z[rval] += PetscConj(*v) * x1; 1238*547795f9SHong Zhang v++; 1239*547795f9SHong Zhang } 1240*547795f9SHong Zhang if (!usecprow) xb++; 1241*547795f9SHong Zhang } 1242*547795f9SHong Zhang break; 1243*547795f9SHong Zhang case 2: 1244*547795f9SHong Zhang for (i=0; i<mbs; i++) { 1245*547795f9SHong Zhang if (usecprow) xb = x + 2*ridx[i]; 1246*547795f9SHong Zhang x1 = xb[0]; x2 = xb[1]; 1247*547795f9SHong Zhang ib = idx + ii[0]; 1248*547795f9SHong Zhang n = ii[1] - ii[0]; ii++; 1249*547795f9SHong Zhang for (j=0; j<n; j++) { 1250*547795f9SHong Zhang rval = ib[j]*2; 1251*547795f9SHong Zhang z[rval++] += PetscConj(v[0])*x1 + PetscConj(v[1])*x2; 1252*547795f9SHong Zhang z[rval++] += PetscConj(v[2])*x1 + PetscConj(v[3])*x2; 1253*547795f9SHong Zhang v += 4; 1254*547795f9SHong Zhang } 1255*547795f9SHong Zhang if (!usecprow) xb += 2; 1256*547795f9SHong Zhang } 1257*547795f9SHong Zhang break; 1258*547795f9SHong Zhang case 3: 1259*547795f9SHong Zhang for (i=0; i<mbs; i++) { 1260*547795f9SHong Zhang if (usecprow) xb = x + 3*ridx[i]; 1261*547795f9SHong Zhang x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 1262*547795f9SHong Zhang ib = idx + ii[0]; 1263*547795f9SHong Zhang n = ii[1] - ii[0]; ii++; 1264*547795f9SHong Zhang for (j=0; j<n; j++) { 1265*547795f9SHong Zhang rval = ib[j]*3; 1266*547795f9SHong Zhang z[rval++] += PetscConj(v[0])*x1 + PetscConj(v[1])*x2 + PetscConj(v[2])*x3; 1267*547795f9SHong Zhang z[rval++] += PetscConj(v[3])*x1 + PetscConj(v[4])*x2 + PetscConj(v[5])*x3; 1268*547795f9SHong Zhang z[rval++] += PetscConj(v[6])*x1 + PetscConj(v[7])*x2 + PetscConj(v[8])*x3; 1269*547795f9SHong Zhang v += 9; 1270*547795f9SHong Zhang } 1271*547795f9SHong Zhang if (!usecprow) xb += 3; 1272*547795f9SHong Zhang } 1273*547795f9SHong Zhang break; 1274*547795f9SHong Zhang case 4: 1275*547795f9SHong Zhang for (i=0; i<mbs; i++) { 1276*547795f9SHong Zhang if (usecprow) xb = x + 4*ridx[i]; 1277*547795f9SHong Zhang x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 1278*547795f9SHong Zhang ib = idx + ii[0]; 1279*547795f9SHong Zhang n = ii[1] - ii[0]; ii++; 1280*547795f9SHong Zhang for (j=0; j<n; j++) { 1281*547795f9SHong Zhang rval = ib[j]*4; 1282*547795f9SHong Zhang z[rval++] += PetscConj(v[0])*x1 + PetscConj(v[1])*x2 + PetscConj(v[2])*x3 + PetscConj(v[3])*x4; 1283*547795f9SHong Zhang z[rval++] += PetscConj(v[4])*x1 + PetscConj(v[5])*x2 + PetscConj(v[6])*x3 + PetscConj(v[7])*x4; 1284*547795f9SHong Zhang z[rval++] += PetscConj(v[8])*x1 + PetscConj(v[9])*x2 + PetscConj(v[10])*x3 + PetscConj(v[11])*x4; 1285*547795f9SHong Zhang z[rval++] += PetscConj(v[12])*x1 + PetscConj(v[13])*x2 + PetscConj(v[14])*x3 + PetscConj(v[15])*x4; 1286*547795f9SHong Zhang v += 16; 1287*547795f9SHong Zhang } 1288*547795f9SHong Zhang if (!usecprow) xb += 4; 1289*547795f9SHong Zhang } 1290*547795f9SHong Zhang break; 1291*547795f9SHong Zhang case 5: 1292*547795f9SHong Zhang for (i=0; i<mbs; i++) { 1293*547795f9SHong Zhang if (usecprow) xb = x + 5*ridx[i]; 1294*547795f9SHong Zhang x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 1295*547795f9SHong Zhang x4 = xb[3]; x5 = xb[4]; 1296*547795f9SHong Zhang ib = idx + ii[0]; 1297*547795f9SHong Zhang n = ii[1] - ii[0]; ii++; 1298*547795f9SHong Zhang for (j=0; j<n; j++) { 1299*547795f9SHong Zhang rval = ib[j]*5; 1300*547795f9SHong Zhang z[rval++] += PetscConj(v[0])*x1 + PetscConj(v[1])*x2 + PetscConj(v[2])*x3 + PetscConj(v[3])*x4 + PetscConj(v[4])*x5; 1301*547795f9SHong Zhang z[rval++] += PetscConj(v[5])*x1 + PetscConj(v[6])*x2 + PetscConj(v[7])*x3 + PetscConj(v[8])*x4 + PetscConj(v[9])*x5; 1302*547795f9SHong Zhang z[rval++] += PetscConj(v[10])*x1 + PetscConj(v[11])*x2 + PetscConj(v[12])*x3 + PetscConj(v[13])*x4 + PetscConj(v[14])*x5; 1303*547795f9SHong Zhang z[rval++] += PetscConj(v[15])*x1 + PetscConj(v[16])*x2 + PetscConj(v[17])*x3 + PetscConj(v[18])*x4 + PetscConj(v[19])*x5; 1304*547795f9SHong Zhang z[rval++] += PetscConj(v[20])*x1 + PetscConj(v[21])*x2 + PetscConj(v[22])*x3 + PetscConj(v[23])*x4 + PetscConj(v[24])*x5; 1305*547795f9SHong Zhang v += 25; 1306*547795f9SHong Zhang } 1307*547795f9SHong Zhang if (!usecprow) xb += 5; 1308*547795f9SHong Zhang } 1309*547795f9SHong Zhang break; 1310*547795f9SHong Zhang default: { /* block sizes larger than 5 by 5 are handled by BLAS */ 1311*547795f9SHong Zhang PetscInt ncols,k; 1312*547795f9SHong Zhang PetscScalar *work,*workt,*xtmp; 1313*547795f9SHong Zhang 1314*547795f9SHong Zhang SETERRQ(PETSC_ERR_SUP,"block size larger than 5 is not supported yet"); 1315*547795f9SHong Zhang if (!a->mult_work) { 1316*547795f9SHong Zhang k = PetscMax(A->rmap->n,A->cmap->n); 1317*547795f9SHong Zhang ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 1318*547795f9SHong Zhang } 1319*547795f9SHong Zhang work = a->mult_work; 1320*547795f9SHong Zhang xtmp = x; 1321*547795f9SHong Zhang for (i=0; i<mbs; i++) { 1322*547795f9SHong Zhang n = ii[1] - ii[0]; ii++; 1323*547795f9SHong Zhang ncols = n*bs; 1324*547795f9SHong Zhang ierr = PetscMemzero(work,ncols*sizeof(PetscScalar));CHKERRQ(ierr); 1325*547795f9SHong Zhang if (usecprow) { 1326*547795f9SHong Zhang xtmp = x + bs*ridx[i]; 1327*547795f9SHong Zhang } 1328*547795f9SHong Zhang Kernel_w_gets_w_plus_trans_Ar_times_v(bs,ncols,xtmp,v,work); 1329*547795f9SHong Zhang /* BLASgemv_("T",&bs,&ncols,&_DOne,v,&bs,xtmp,&_One,&_DOne,work,&_One); */ 1330*547795f9SHong Zhang v += n*bs2; 1331*547795f9SHong Zhang if (!usecprow) xtmp += bs; 1332*547795f9SHong Zhang workt = work; 1333*547795f9SHong Zhang for (j=0; j<n; j++) { 1334*547795f9SHong Zhang zb = z + bs*(*idx++); 1335*547795f9SHong Zhang for (k=0; k<bs; k++) zb[k] += workt[k] ; 1336*547795f9SHong Zhang workt += bs; 1337*547795f9SHong Zhang } 1338*547795f9SHong Zhang } 1339*547795f9SHong Zhang } 1340*547795f9SHong Zhang } 1341*547795f9SHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1342*547795f9SHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 1343*547795f9SHong Zhang ierr = PetscLogFlops(2.0*a->nz*a->bs2);CHKERRQ(ierr); 1344*547795f9SHong Zhang PetscFunctionReturn(0); 1345*547795f9SHong Zhang } 1346*547795f9SHong Zhang 1347*547795f9SHong Zhang #undef __FUNCT__ 13484a2ae208SSatish Balay #define __FUNCT__ "MatMultTransposeAdd_SeqBAIJ" 1349dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqBAIJ(Mat A,Vec xx,Vec yy,Vec zz) 13502d61bbb3SSatish Balay 13512d61bbb3SSatish Balay { 13522d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1353dcf5cc72SBarry Smith PetscScalar *zb,*x,*z,*xb = 0,x1,x2,x3,x4,x5; 13543f1db9ecSBarry Smith MatScalar *v; 13556849ba73SBarry Smith PetscErrorCode ierr; 1356d0f46423SBarry Smith PetscInt mbs,i,*idx,*ii,rval,bs=A->rmap->bs,j,n,bs2=a->bs2,*ib,*ridx=PETSC_NULL; 13573447b6efSHong Zhang Mat_CompressedRow cprow = a->compressedrow; 13583447b6efSHong Zhang PetscTruth usecprow=cprow.use; 13592d61bbb3SSatish Balay 13602d61bbb3SSatish Balay PetscFunctionBegin; 13616a65c766SHong Zhang if (yy != zz) { ierr = VecCopy_Seq(yy,zz);CHKERRQ(ierr); } 13623447b6efSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 13633447b6efSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 13642d61bbb3SSatish Balay 13652d61bbb3SSatish Balay idx = a->j; 13662d61bbb3SSatish Balay v = a->a; 13673447b6efSHong Zhang if (usecprow){ 13683447b6efSHong Zhang mbs = cprow.nrows; 13693447b6efSHong Zhang ii = cprow.i; 13707b2bb3b9SHong Zhang ridx = cprow.rindex; 13713447b6efSHong Zhang } else { 13723447b6efSHong Zhang mbs=a->mbs; 13732d61bbb3SSatish Balay ii = a->i; 1374f1af5d2fSBarry Smith xb = x; 13753447b6efSHong Zhang } 13762d61bbb3SSatish Balay 13772d61bbb3SSatish Balay switch (bs) { 13782d61bbb3SSatish Balay case 1: 13792d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 13807b2bb3b9SHong Zhang if (usecprow) xb = x + ridx[i]; 1381f1af5d2fSBarry Smith x1 = xb[0]; 13823447b6efSHong Zhang ib = idx + ii[0]; 13833447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 13842d61bbb3SSatish Balay for (j=0; j<n; j++) { 13852d61bbb3SSatish Balay rval = ib[j]; 1386f1af5d2fSBarry Smith z[rval] += *v * x1; 1387f1af5d2fSBarry Smith v++; 13882d61bbb3SSatish Balay } 13893447b6efSHong Zhang if (!usecprow) xb++; 13902d61bbb3SSatish Balay } 13912d61bbb3SSatish Balay break; 13922d61bbb3SSatish Balay case 2: 13932d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 13947b2bb3b9SHong Zhang if (usecprow) xb = x + 2*ridx[i]; 1395f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; 13963447b6efSHong Zhang ib = idx + ii[0]; 13973447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 13982d61bbb3SSatish Balay for (j=0; j<n; j++) { 13992d61bbb3SSatish Balay rval = ib[j]*2; 14002d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2; 14012d61bbb3SSatish Balay z[rval++] += v[2]*x1 + v[3]*x2; 14022d61bbb3SSatish Balay v += 4; 14032d61bbb3SSatish Balay } 14043447b6efSHong Zhang if (!usecprow) xb += 2; 14052d61bbb3SSatish Balay } 14062d61bbb3SSatish Balay break; 14072d61bbb3SSatish Balay case 3: 14082d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 14097b2bb3b9SHong Zhang if (usecprow) xb = x + 3*ridx[i]; 1410f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 14113447b6efSHong Zhang ib = idx + ii[0]; 14123447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 14132d61bbb3SSatish Balay for (j=0; j<n; j++) { 14142d61bbb3SSatish Balay rval = ib[j]*3; 14152d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2 + v[2]*x3; 14162d61bbb3SSatish Balay z[rval++] += v[3]*x1 + v[4]*x2 + v[5]*x3; 14172d61bbb3SSatish Balay z[rval++] += v[6]*x1 + v[7]*x2 + v[8]*x3; 14182d61bbb3SSatish Balay v += 9; 14192d61bbb3SSatish Balay } 14203447b6efSHong Zhang if (!usecprow) xb += 3; 14212d61bbb3SSatish Balay } 14222d61bbb3SSatish Balay break; 14232d61bbb3SSatish Balay case 4: 14242d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 14257b2bb3b9SHong Zhang if (usecprow) xb = x + 4*ridx[i]; 1426f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 14273447b6efSHong Zhang ib = idx + ii[0]; 14283447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 14292d61bbb3SSatish Balay for (j=0; j<n; j++) { 14302d61bbb3SSatish Balay rval = ib[j]*4; 14312d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4; 14322d61bbb3SSatish Balay z[rval++] += v[4]*x1 + v[5]*x2 + v[6]*x3 + v[7]*x4; 14332d61bbb3SSatish Balay z[rval++] += v[8]*x1 + v[9]*x2 + v[10]*x3 + v[11]*x4; 14342d61bbb3SSatish Balay z[rval++] += v[12]*x1 + v[13]*x2 + v[14]*x3 + v[15]*x4; 14352d61bbb3SSatish Balay v += 16; 14362d61bbb3SSatish Balay } 14373447b6efSHong Zhang if (!usecprow) xb += 4; 14382d61bbb3SSatish Balay } 14392d61bbb3SSatish Balay break; 14402d61bbb3SSatish Balay case 5: 14412d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 14427b2bb3b9SHong Zhang if (usecprow) xb = x + 5*ridx[i]; 1443f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 14442d61bbb3SSatish Balay x4 = xb[3]; x5 = xb[4]; 14453447b6efSHong Zhang ib = idx + ii[0]; 14463447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 14472d61bbb3SSatish Balay for (j=0; j<n; j++) { 14482d61bbb3SSatish Balay rval = ib[j]*5; 14492d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4 + v[4]*x5; 14502d61bbb3SSatish Balay z[rval++] += v[5]*x1 + v[6]*x2 + v[7]*x3 + v[8]*x4 + v[9]*x5; 14512d61bbb3SSatish Balay z[rval++] += v[10]*x1 + v[11]*x2 + v[12]*x3 + v[13]*x4 + v[14]*x5; 14522d61bbb3SSatish Balay z[rval++] += v[15]*x1 + v[16]*x2 + v[17]*x3 + v[18]*x4 + v[19]*x5; 14532d61bbb3SSatish Balay z[rval++] += v[20]*x1 + v[21]*x2 + v[22]*x3 + v[23]*x4 + v[24]*x5; 14542d61bbb3SSatish Balay v += 25; 14552d61bbb3SSatish Balay } 14563447b6efSHong Zhang if (!usecprow) xb += 5; 14572d61bbb3SSatish Balay } 14582d61bbb3SSatish Balay break; 1459f1af5d2fSBarry Smith default: { /* block sizes larger then 5 by 5 are handled by BLAS */ 1460690b6cddSBarry Smith PetscInt ncols,k; 14613447b6efSHong Zhang PetscScalar *work,*workt,*xtmp; 14623f1db9ecSBarry Smith 14632d61bbb3SSatish Balay if (!a->mult_work) { 1464d0f46423SBarry Smith k = PetscMax(A->rmap->n,A->cmap->n); 146587828ca2SBarry Smith ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 14662d61bbb3SSatish Balay } 14672d61bbb3SSatish Balay work = a->mult_work; 14683447b6efSHong Zhang xtmp = x; 14692d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 14702d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 14712d61bbb3SSatish Balay ncols = n*bs; 147287828ca2SBarry Smith ierr = PetscMemzero(work,ncols*sizeof(PetscScalar));CHKERRQ(ierr); 14733447b6efSHong Zhang if (usecprow) { 14747b2bb3b9SHong Zhang xtmp = x + bs*ridx[i]; 14753447b6efSHong Zhang } 14763447b6efSHong Zhang Kernel_w_gets_w_plus_trans_Ar_times_v(bs,ncols,xtmp,v,work); 147771044d3cSBarry Smith /* BLASgemv_("T",&bs,&ncols,&_DOne,v,&bs,xtmp,&_One,&_DOne,work,&_One); */ 14782d61bbb3SSatish Balay v += n*bs2; 14793447b6efSHong Zhang if (!usecprow) xtmp += bs; 14802d61bbb3SSatish Balay workt = work; 14812d61bbb3SSatish Balay for (j=0; j<n; j++) { 14822d61bbb3SSatish Balay zb = z + bs*(*idx++); 14832d61bbb3SSatish Balay for (k=0; k<bs; k++) zb[k] += workt[k] ; 14842d61bbb3SSatish Balay workt += bs; 14852d61bbb3SSatish Balay } 14862d61bbb3SSatish Balay } 14872d61bbb3SSatish Balay } 14882d61bbb3SSatish Balay } 14893447b6efSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 14903447b6efSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 1491dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*a->nz*a->bs2);CHKERRQ(ierr); 14922d61bbb3SSatish Balay PetscFunctionReturn(0); 14932d61bbb3SSatish Balay } 14942d61bbb3SSatish Balay 14954a2ae208SSatish Balay #undef __FUNCT__ 14964a2ae208SSatish Balay #define __FUNCT__ "MatScale_SeqBAIJ" 1497f4df32b1SMatthew Knepley PetscErrorCode MatScale_SeqBAIJ(Mat inA,PetscScalar alpha) 14982d61bbb3SSatish Balay { 14992d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)inA->data; 1500690b6cddSBarry Smith PetscInt totalnz = a->bs2*a->nz; 1501f4df32b1SMatthew Knepley PetscScalar oalpha = alpha; 1502efee365bSSatish Balay PetscErrorCode ierr; 15030805154bSBarry Smith PetscBLASInt one = 1,tnz = PetscBLASIntCast(totalnz); 15042d61bbb3SSatish Balay 15052d61bbb3SSatish Balay PetscFunctionBegin; 1506f4df32b1SMatthew Knepley BLASscal_(&tnz,&oalpha,a->a,&one); 1507efee365bSSatish Balay ierr = PetscLogFlops(totalnz);CHKERRQ(ierr); 15082d61bbb3SSatish Balay PetscFunctionReturn(0); 15092d61bbb3SSatish Balay } 15102d61bbb3SSatish Balay 15114a2ae208SSatish Balay #undef __FUNCT__ 15124a2ae208SSatish Balay #define __FUNCT__ "MatNorm_SeqBAIJ" 1513dfbe8321SBarry Smith PetscErrorCode MatNorm_SeqBAIJ(Mat A,NormType type,PetscReal *norm) 15142d61bbb3SSatish Balay { 15158a62d963SHong Zhang PetscErrorCode ierr; 15162d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 15173f1db9ecSBarry Smith MatScalar *v = a->a; 1518329f5518SBarry Smith PetscReal sum = 0.0; 1519d0f46423SBarry Smith PetscInt i,j,k,bs=A->rmap->bs,nz=a->nz,bs2=a->bs2,k1; 15202d61bbb3SSatish Balay 15212d61bbb3SSatish Balay PetscFunctionBegin; 15222d61bbb3SSatish Balay if (type == NORM_FROBENIUS) { 15232d61bbb3SSatish Balay for (i=0; i< bs2*nz; i++) { 1524aa482453SBarry Smith #if defined(PETSC_USE_COMPLEX) 1525329f5518SBarry Smith sum += PetscRealPart(PetscConj(*v)*(*v)); v++; 15262d61bbb3SSatish Balay #else 15272d61bbb3SSatish Balay sum += (*v)*(*v); v++; 15282d61bbb3SSatish Balay #endif 15292d61bbb3SSatish Balay } 15302d61bbb3SSatish Balay *norm = sqrt(sum); 15318a62d963SHong Zhang } else if (type == NORM_1) { /* maximum column sum */ 15328a62d963SHong Zhang PetscReal *tmp; 15338a62d963SHong Zhang PetscInt *bcol = a->j; 1534d0f46423SBarry Smith ierr = PetscMalloc((A->cmap->n+1)*sizeof(PetscReal),&tmp);CHKERRQ(ierr); 1535d0f46423SBarry Smith ierr = PetscMemzero(tmp,A->cmap->n*sizeof(PetscReal));CHKERRQ(ierr); 15368a62d963SHong Zhang for (i=0; i<nz; i++){ 15378a62d963SHong Zhang for (j=0; j<bs; j++){ 15388a62d963SHong Zhang k1 = bs*(*bcol) + j; /* column index */ 15398a62d963SHong Zhang for (k=0; k<bs; k++){ 15408a62d963SHong Zhang tmp[k1] += PetscAbsScalar(*v); v++; 15418a62d963SHong Zhang } 15428a62d963SHong Zhang } 15438a62d963SHong Zhang bcol++; 15448a62d963SHong Zhang } 15458a62d963SHong Zhang *norm = 0.0; 1546d0f46423SBarry Smith for (j=0; j<A->cmap->n; j++) { 15478a62d963SHong Zhang if (tmp[j] > *norm) *norm = tmp[j]; 15488a62d963SHong Zhang } 15498a62d963SHong Zhang ierr = PetscFree(tmp);CHKERRQ(ierr); 1550596552b5SBarry Smith } else if (type == NORM_INFINITY) { /* maximum row sum */ 1551596552b5SBarry Smith *norm = 0.0; 1552596552b5SBarry Smith for (k=0; k<bs; k++) { 155374f84c7bSSatish Balay for (j=0; j<a->mbs; j++) { 1554596552b5SBarry Smith v = a->a + bs2*a->i[j] + k; 1555596552b5SBarry Smith sum = 0.0; 1556596552b5SBarry Smith for (i=0; i<a->i[j+1]-a->i[j]; i++) { 15570e90e235SBarry Smith for (k1=0; k1<bs; k1++){ 1558596552b5SBarry Smith sum += PetscAbsScalar(*v); 1559596552b5SBarry Smith v += bs; 15602d61bbb3SSatish Balay } 15610e90e235SBarry Smith } 1562596552b5SBarry Smith if (sum > *norm) *norm = sum; 1563596552b5SBarry Smith } 1564596552b5SBarry Smith } 1565596552b5SBarry Smith } else { 156629bbc08cSBarry Smith SETERRQ(PETSC_ERR_SUP,"No support for this norm yet"); 15672d61bbb3SSatish Balay } 15682d61bbb3SSatish Balay PetscFunctionReturn(0); 15692d61bbb3SSatish Balay } 15702d61bbb3SSatish Balay 15712d61bbb3SSatish Balay 15724a2ae208SSatish Balay #undef __FUNCT__ 15734a2ae208SSatish Balay #define __FUNCT__ "MatEqual_SeqBAIJ" 1574dfbe8321SBarry Smith PetscErrorCode MatEqual_SeqBAIJ(Mat A,Mat B,PetscTruth* flg) 15752d61bbb3SSatish Balay { 15762d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ *)A->data,*b = (Mat_SeqBAIJ *)B->data; 1577dfbe8321SBarry Smith PetscErrorCode ierr; 15782d61bbb3SSatish Balay 15792d61bbb3SSatish Balay PetscFunctionBegin; 15802d61bbb3SSatish Balay /* If the matrix/block dimensions are not equal, or no of nonzeros or shift */ 1581d0f46423SBarry Smith if ((A->rmap->N != B->rmap->N) || (A->cmap->n != B->cmap->n) || (A->rmap->bs != B->rmap->bs)|| (a->nz != b->nz)) { 1582273d9f13SBarry Smith *flg = PETSC_FALSE; 1583273d9f13SBarry Smith PetscFunctionReturn(0); 15842d61bbb3SSatish Balay } 15852d61bbb3SSatish Balay 15862d61bbb3SSatish Balay /* if the a->i are the same */ 1587690b6cddSBarry Smith ierr = PetscMemcmp(a->i,b->i,(a->mbs+1)*sizeof(PetscInt),flg);CHKERRQ(ierr); 1588abc0a331SBarry Smith if (!*flg) { 15890f5bd95cSBarry Smith PetscFunctionReturn(0); 15902d61bbb3SSatish Balay } 15912d61bbb3SSatish Balay 15922d61bbb3SSatish Balay /* if a->j are the same */ 1593690b6cddSBarry Smith ierr = PetscMemcmp(a->j,b->j,(a->nz)*sizeof(PetscInt),flg);CHKERRQ(ierr); 1594abc0a331SBarry Smith if (!*flg) { 15950f5bd95cSBarry Smith PetscFunctionReturn(0); 15962d61bbb3SSatish Balay } 15972d61bbb3SSatish Balay /* if a->a are the same */ 1598d0f46423SBarry Smith ierr = PetscMemcmp(a->a,b->a,(a->nz)*(A->rmap->bs)*(B->rmap->bs)*sizeof(PetscScalar),flg);CHKERRQ(ierr); 15992d61bbb3SSatish Balay PetscFunctionReturn(0); 16002d61bbb3SSatish Balay 16012d61bbb3SSatish Balay } 16022d61bbb3SSatish Balay 16034a2ae208SSatish Balay #undef __FUNCT__ 16044a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonal_SeqBAIJ" 1605dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_SeqBAIJ(Mat A,Vec v) 16062d61bbb3SSatish Balay { 16072d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1608dfbe8321SBarry Smith PetscErrorCode ierr; 1609690b6cddSBarry Smith PetscInt i,j,k,n,row,bs,*ai,*aj,ambs,bs2; 161087828ca2SBarry Smith PetscScalar *x,zero = 0.0; 16113f1db9ecSBarry Smith MatScalar *aa,*aa_j; 16122d61bbb3SSatish Balay 16132d61bbb3SSatish Balay PetscFunctionBegin; 161429bbc08cSBarry Smith if (A->factor) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Not for factored matrix"); 1615d0f46423SBarry Smith bs = A->rmap->bs; 16162d61bbb3SSatish Balay aa = a->a; 16172d61bbb3SSatish Balay ai = a->i; 16182d61bbb3SSatish Balay aj = a->j; 16192d61bbb3SSatish Balay ambs = a->mbs; 16202d61bbb3SSatish Balay bs2 = a->bs2; 16212d61bbb3SSatish Balay 16222dcb1b2aSMatthew Knepley ierr = VecSet(v,zero);CHKERRQ(ierr); 16231ebc52fbSHong Zhang ierr = VecGetArray(v,&x);CHKERRQ(ierr); 1624e1311b90SBarry Smith ierr = VecGetLocalSize(v,&n);CHKERRQ(ierr); 1625d0f46423SBarry Smith if (n != A->rmap->N) SETERRQ(PETSC_ERR_ARG_SIZ,"Nonconforming matrix and vector"); 16262d61bbb3SSatish Balay for (i=0; i<ambs; i++) { 16272d61bbb3SSatish Balay for (j=ai[i]; j<ai[i+1]; j++) { 16282d61bbb3SSatish Balay if (aj[j] == i) { 16292d61bbb3SSatish Balay row = i*bs; 16302d61bbb3SSatish Balay aa_j = aa+j*bs2; 16312d61bbb3SSatish Balay for (k=0; k<bs2; k+=(bs+1),row++) x[row] = aa_j[k]; 16322d61bbb3SSatish Balay break; 16332d61bbb3SSatish Balay } 16342d61bbb3SSatish Balay } 16352d61bbb3SSatish Balay } 16361ebc52fbSHong Zhang ierr = VecRestoreArray(v,&x);CHKERRQ(ierr); 16372d61bbb3SSatish Balay PetscFunctionReturn(0); 16382d61bbb3SSatish Balay } 16392d61bbb3SSatish Balay 16404a2ae208SSatish Balay #undef __FUNCT__ 16414a2ae208SSatish Balay #define __FUNCT__ "MatDiagonalScale_SeqBAIJ" 1642dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_SeqBAIJ(Mat A,Vec ll,Vec rr) 16432d61bbb3SSatish Balay { 16442d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 164587828ca2SBarry Smith PetscScalar *l,*r,x,*li,*ri; 16463f1db9ecSBarry Smith MatScalar *aa,*v; 1647dfbe8321SBarry Smith PetscErrorCode ierr; 1648690b6cddSBarry Smith PetscInt i,j,k,lm,rn,M,m,n,*ai,*aj,mbs,tmp,bs,bs2; 16492d61bbb3SSatish Balay 16502d61bbb3SSatish Balay PetscFunctionBegin; 16512d61bbb3SSatish Balay ai = a->i; 16522d61bbb3SSatish Balay aj = a->j; 16532d61bbb3SSatish Balay aa = a->a; 1654d0f46423SBarry Smith m = A->rmap->n; 1655d0f46423SBarry Smith n = A->cmap->n; 1656d0f46423SBarry Smith bs = A->rmap->bs; 16572d61bbb3SSatish Balay mbs = a->mbs; 16582d61bbb3SSatish Balay bs2 = a->bs2; 16592d61bbb3SSatish Balay if (ll) { 16601ebc52fbSHong Zhang ierr = VecGetArray(ll,&l);CHKERRQ(ierr); 1661e1311b90SBarry Smith ierr = VecGetLocalSize(ll,&lm);CHKERRQ(ierr); 166229bbc08cSBarry Smith if (lm != m) SETERRQ(PETSC_ERR_ARG_SIZ,"Left scaling vector wrong length"); 16632d61bbb3SSatish Balay for (i=0; i<mbs; i++) { /* for each block row */ 16642d61bbb3SSatish Balay M = ai[i+1] - ai[i]; 16652d61bbb3SSatish Balay li = l + i*bs; 16662d61bbb3SSatish Balay v = aa + bs2*ai[i]; 16672d61bbb3SSatish Balay for (j=0; j<M; j++) { /* for each block */ 16682d61bbb3SSatish Balay for (k=0; k<bs2; k++) { 16692d61bbb3SSatish Balay (*v++) *= li[k%bs]; 16702d61bbb3SSatish Balay } 16712d61bbb3SSatish Balay } 16722d61bbb3SSatish Balay } 16731ebc52fbSHong Zhang ierr = VecRestoreArray(ll,&l);CHKERRQ(ierr); 1674efee365bSSatish Balay ierr = PetscLogFlops(a->nz);CHKERRQ(ierr); 16752d61bbb3SSatish Balay } 16762d61bbb3SSatish Balay 16772d61bbb3SSatish Balay if (rr) { 16781ebc52fbSHong Zhang ierr = VecGetArray(rr,&r);CHKERRQ(ierr); 1679e1311b90SBarry Smith ierr = VecGetLocalSize(rr,&rn);CHKERRQ(ierr); 168029bbc08cSBarry Smith if (rn != n) SETERRQ(PETSC_ERR_ARG_SIZ,"Right scaling vector wrong length"); 16812d61bbb3SSatish Balay for (i=0; i<mbs; i++) { /* for each block row */ 16822d61bbb3SSatish Balay M = ai[i+1] - ai[i]; 16832d61bbb3SSatish Balay v = aa + bs2*ai[i]; 16842d61bbb3SSatish Balay for (j=0; j<M; j++) { /* for each block */ 16852d61bbb3SSatish Balay ri = r + bs*aj[ai[i]+j]; 16862d61bbb3SSatish Balay for (k=0; k<bs; k++) { 16872d61bbb3SSatish Balay x = ri[k]; 16882d61bbb3SSatish Balay for (tmp=0; tmp<bs; tmp++) (*v++) *= x; 16892d61bbb3SSatish Balay } 16902d61bbb3SSatish Balay } 16912d61bbb3SSatish Balay } 16921ebc52fbSHong Zhang ierr = VecRestoreArray(rr,&r);CHKERRQ(ierr); 1693efee365bSSatish Balay ierr = PetscLogFlops(a->nz);CHKERRQ(ierr); 16942d61bbb3SSatish Balay } 16952d61bbb3SSatish Balay PetscFunctionReturn(0); 16962d61bbb3SSatish Balay } 16972d61bbb3SSatish Balay 16982d61bbb3SSatish Balay 16994a2ae208SSatish Balay #undef __FUNCT__ 17004a2ae208SSatish Balay #define __FUNCT__ "MatGetInfo_SeqBAIJ" 1701dfbe8321SBarry Smith PetscErrorCode MatGetInfo_SeqBAIJ(Mat A,MatInfoType flag,MatInfo *info) 17022d61bbb3SSatish Balay { 17032d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 17042d61bbb3SSatish Balay 17052d61bbb3SSatish Balay PetscFunctionBegin; 17062d61bbb3SSatish Balay info->block_size = a->bs2; 17072d61bbb3SSatish Balay info->nz_allocated = a->maxnz; 17082d61bbb3SSatish Balay info->nz_used = a->bs2*a->nz; 17092d61bbb3SSatish Balay info->nz_unneeded = (double)(info->nz_allocated - info->nz_used); 17102d61bbb3SSatish Balay info->assemblies = A->num_ass; 17112d61bbb3SSatish Balay info->mallocs = a->reallocs; 17127adad957SLisandro Dalcin info->memory = ((PetscObject)A)->mem; 17132d61bbb3SSatish Balay if (A->factor) { 17142d61bbb3SSatish Balay info->fill_ratio_given = A->info.fill_ratio_given; 17152d61bbb3SSatish Balay info->fill_ratio_needed = A->info.fill_ratio_needed; 17162d61bbb3SSatish Balay info->factor_mallocs = A->info.factor_mallocs; 17172d61bbb3SSatish Balay } else { 17182d61bbb3SSatish Balay info->fill_ratio_given = 0; 17192d61bbb3SSatish Balay info->fill_ratio_needed = 0; 17202d61bbb3SSatish Balay info->factor_mallocs = 0; 17212d61bbb3SSatish Balay } 17222d61bbb3SSatish Balay PetscFunctionReturn(0); 17232d61bbb3SSatish Balay } 17242d61bbb3SSatish Balay 17252d61bbb3SSatish Balay 17264a2ae208SSatish Balay #undef __FUNCT__ 17274a2ae208SSatish Balay #define __FUNCT__ "MatZeroEntries_SeqBAIJ" 1728dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_SeqBAIJ(Mat A) 17292d61bbb3SSatish Balay { 17302d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1731dfbe8321SBarry Smith PetscErrorCode ierr; 17322d61bbb3SSatish Balay 17332d61bbb3SSatish Balay PetscFunctionBegin; 1734549d3d68SSatish Balay ierr = PetscMemzero(a->a,a->bs2*a->i[a->mbs]*sizeof(MatScalar));CHKERRQ(ierr); 17352d61bbb3SSatish Balay PetscFunctionReturn(0); 17362d61bbb3SSatish Balay } 1737