1be1d678aSKris Buschelman #define PETSCMAT_DLL 2cac129eeSSatish Balay 370f55243SBarry Smith #include "src/mat/impls/baij/seq/baij.h" 42d61bbb3SSatish Balay #include "src/inline/spops.h" 53f1db9ecSBarry Smith #include "src/inline/ilu.h" 60a835dfdSSatish Balay #include "petscbt.h" 7cac129eeSSatish Balay 84a2ae208SSatish Balay #undef __FUNCT__ 94a2ae208SSatish Balay #define __FUNCT__ "MatIncreaseOverlap_SeqBAIJ" 10690b6cddSBarry Smith PetscErrorCode MatIncreaseOverlap_SeqBAIJ(Mat A,PetscInt is_max,IS is[],PetscInt ov) 11a3192f15SSatish Balay { 12a3192f15SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 136849ba73SBarry Smith PetscErrorCode ierr; 14690b6cddSBarry Smith PetscInt row,i,j,k,l,m,n,*idx,*nidx,isz,val,ival; 15690b6cddSBarry Smith PetscInt start,end,*ai,*aj,bs,*nidx2; 16f1af5d2fSBarry Smith PetscBT table; 17a3192f15SSatish Balay 183a40ed3dSBarry Smith PetscFunctionBegin; 19a3192f15SSatish Balay m = a->mbs; 20a3192f15SSatish Balay ai = a->i; 21a3192f15SSatish Balay aj = a->j; 22521d7252SBarry Smith bs = A->bs; 23a3192f15SSatish Balay 2429bbc08cSBarry Smith if (ov < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative overlap specified"); 25a3192f15SSatish Balay 266831982aSBarry Smith ierr = PetscBTCreate(m,table);CHKERRQ(ierr); 27690b6cddSBarry Smith ierr = PetscMalloc((m+1)*sizeof(PetscInt),&nidx);CHKERRQ(ierr); 28690b6cddSBarry Smith ierr = PetscMalloc((A->m+1)*sizeof(PetscInt),&nidx2);CHKERRQ(ierr); 29a3192f15SSatish Balay 30a3192f15SSatish Balay for (i=0; i<is_max; i++) { 31a3192f15SSatish Balay /* Initialise the two local arrays */ 32a3192f15SSatish Balay isz = 0; 336831982aSBarry Smith ierr = PetscBTMemzero(m,table);CHKERRQ(ierr); 34a3192f15SSatish Balay 35a3192f15SSatish Balay /* Extract the indices, assume there can be duplicate entries */ 36a3192f15SSatish Balay ierr = ISGetIndices(is[i],&idx);CHKERRQ(ierr); 37b9b97703SBarry Smith ierr = ISGetLocalSize(is[i],&n);CHKERRQ(ierr); 38a3192f15SSatish Balay 39a3192f15SSatish Balay /* Enter these into the temp arrays i.e mark table[row], enter row into new index */ 40a3192f15SSatish Balay for (j=0; j<n ; ++j){ 41218c64b6SSatish Balay ival = idx[j]/bs; /* convert the indices into block indices */ 425eee224dSHong Zhang if (ival>=m) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"index greater than mat-dim"); 43f1af5d2fSBarry Smith if(!PetscBTLookupSet(table,ival)) { nidx[isz++] = ival;} 44a3192f15SSatish Balay } 45a3192f15SSatish Balay ierr = ISRestoreIndices(is[i],&idx);CHKERRQ(ierr); 46a3192f15SSatish Balay ierr = ISDestroy(is[i]);CHKERRQ(ierr); 47a3192f15SSatish Balay 48a3192f15SSatish Balay k = 0; 49a3192f15SSatish Balay for (j=0; j<ov; j++){ /* for each overlap*/ 50a3192f15SSatish Balay n = isz; 51a3192f15SSatish Balay for (; k<n ; k++){ /* do only those rows in nidx[k], which are not done yet */ 52a3192f15SSatish Balay row = nidx[k]; 53a3192f15SSatish Balay start = ai[row]; 54a3192f15SSatish Balay end = ai[row+1]; 55a3192f15SSatish Balay for (l = start; l<end ; l++){ 56a3192f15SSatish Balay val = aj[l]; 57f1af5d2fSBarry Smith if (!PetscBTLookupSet(table,val)) {nidx[isz++] = val;} 58a3192f15SSatish Balay } 59a3192f15SSatish Balay } 60a3192f15SSatish Balay } 61218c64b6SSatish Balay /* expand the Index Set */ 62218c64b6SSatish Balay for (j=0; j<isz; j++) { 63218c64b6SSatish Balay for (k=0; k<bs; k++) 64218c64b6SSatish Balay nidx2[j*bs+k] = nidx[j]*bs+k; 65218c64b6SSatish Balay } 66329f5518SBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,isz*bs,nidx2,is+i);CHKERRQ(ierr); 67a3192f15SSatish Balay } 686831982aSBarry Smith ierr = PetscBTDestroy(table);CHKERRQ(ierr); 69606d414cSSatish Balay ierr = PetscFree(nidx);CHKERRQ(ierr); 70606d414cSSatish Balay ierr = PetscFree(nidx2);CHKERRQ(ierr); 713a40ed3dSBarry Smith PetscFunctionReturn(0); 72a3192f15SSatish Balay } 731c351548SSatish Balay 744a2ae208SSatish Balay #undef __FUNCT__ 754a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrix_SeqBAIJ_Private" 76690b6cddSBarry Smith PetscErrorCode MatGetSubMatrix_SeqBAIJ_Private(Mat A,IS isrow,IS iscol,PetscInt cs,MatReuse scall,Mat *B) 77736121d4SSatish Balay { 78736121d4SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*c; 796849ba73SBarry Smith PetscErrorCode ierr; 80690b6cddSBarry Smith PetscInt *smap,i,k,kstart,kend,oldcols = a->nbs,*lens; 81690b6cddSBarry Smith PetscInt row,mat_i,*mat_j,tcol,*mat_ilen; 82521d7252SBarry Smith PetscInt *irow,*icol,nrows,ncols,*ssmap,bs=A->bs,bs2=a->bs2; 83690b6cddSBarry Smith PetscInt *aj = a->j,*ai = a->i; 843f1db9ecSBarry Smith MatScalar *mat_a; 85736121d4SSatish Balay Mat C; 860f5bd95cSBarry Smith PetscTruth flag; 87736121d4SSatish Balay 883a40ed3dSBarry Smith PetscFunctionBegin; 89888f2ed8SSatish Balay ierr = ISSorted(iscol,(PetscTruth*)&i);CHKERRQ(ierr); 9029bbc08cSBarry Smith if (!i) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"IS is not sorted"); 91736121d4SSatish Balay 92736121d4SSatish Balay ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr); 93218c64b6SSatish Balay ierr = ISGetIndices(iscol,&icol);CHKERRQ(ierr); 94b9b97703SBarry Smith ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr); 95b9b97703SBarry Smith ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr); 96736121d4SSatish Balay 97690b6cddSBarry Smith ierr = PetscMalloc((1+oldcols)*sizeof(PetscInt),&smap);CHKERRQ(ierr); 98736121d4SSatish Balay ssmap = smap; 99690b6cddSBarry Smith ierr = PetscMalloc((1+nrows)*sizeof(PetscInt),&lens);CHKERRQ(ierr); 100690b6cddSBarry Smith ierr = PetscMemzero(smap,oldcols*sizeof(PetscInt));CHKERRQ(ierr); 101736121d4SSatish Balay for (i=0; i<ncols; i++) smap[icol[i]] = i+1; 102736121d4SSatish Balay /* determine lens of each row */ 103736121d4SSatish Balay for (i=0; i<nrows; i++) { 104736121d4SSatish Balay kstart = ai[irow[i]]; 105736121d4SSatish Balay kend = kstart + a->ilen[irow[i]]; 106736121d4SSatish Balay lens[i] = 0; 107736121d4SSatish Balay for (k=kstart; k<kend; k++) { 108736121d4SSatish Balay if (ssmap[aj[k]]) { 109736121d4SSatish Balay lens[i]++; 110736121d4SSatish Balay } 111736121d4SSatish Balay } 112736121d4SSatish Balay } 113736121d4SSatish Balay /* Create and fill new matrix */ 114736121d4SSatish Balay if (scall == MAT_REUSE_MATRIX) { 115736121d4SSatish Balay c = (Mat_SeqBAIJ *)((*B)->data); 116736121d4SSatish Balay 117521d7252SBarry Smith if (c->mbs!=nrows || c->nbs!=ncols || (*B)->bs!=bs) SETERRQ(PETSC_ERR_ARG_SIZ,"Submatrix wrong size"); 118690b6cddSBarry Smith ierr = PetscMemcmp(c->ilen,lens,c->mbs *sizeof(PetscInt),&flag);CHKERRQ(ierr); 119abc0a331SBarry Smith if (!flag) { 12029bbc08cSBarry Smith SETERRQ(PETSC_ERR_ARG_SIZ,"Cannot reuse matrix. wrong no of nonzeros"); 121736121d4SSatish Balay } 122690b6cddSBarry Smith ierr = PetscMemzero(c->ilen,c->mbs*sizeof(PetscInt));CHKERRQ(ierr); 123736121d4SSatish Balay C = *B; 1243a40ed3dSBarry Smith } else { 125f69a0ea3SMatthew Knepley ierr = MatCreate(A->comm,&C);CHKERRQ(ierr); 126f69a0ea3SMatthew Knepley ierr = MatSetSizes(C,nrows*bs,ncols*bs,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr); 127e2d9671bSKris Buschelman ierr = MatSetType(C,A->type_name);CHKERRQ(ierr); 128ab93d7beSBarry Smith ierr = MatSeqBAIJSetPreallocation_SeqBAIJ(C,bs,0,lens);CHKERRQ(ierr); 129736121d4SSatish Balay } 130736121d4SSatish Balay c = (Mat_SeqBAIJ *)(C->data); 131736121d4SSatish Balay for (i=0; i<nrows; i++) { 132736121d4SSatish Balay row = irow[i]; 133736121d4SSatish Balay kstart = ai[row]; 134736121d4SSatish Balay kend = kstart + a->ilen[row]; 135736121d4SSatish Balay mat_i = c->i[i]; 136736121d4SSatish Balay mat_j = c->j + mat_i; 137218c64b6SSatish Balay mat_a = c->a + mat_i*bs2; 138736121d4SSatish Balay mat_ilen = c->ilen + i; 139736121d4SSatish Balay for (k=kstart; k<kend; k++) { 140736121d4SSatish Balay if ((tcol=ssmap[a->j[k]])) { 141736121d4SSatish Balay *mat_j++ = tcol - 1; 142549d3d68SSatish Balay ierr = PetscMemcpy(mat_a,a->a+k*bs2,bs2*sizeof(MatScalar));CHKERRQ(ierr); 143549d3d68SSatish Balay mat_a += bs2; 144736121d4SSatish Balay (*mat_ilen)++; 145736121d4SSatish Balay } 146736121d4SSatish Balay } 147736121d4SSatish Balay } 148218c64b6SSatish Balay 149736121d4SSatish Balay /* Free work space */ 150736121d4SSatish Balay ierr = ISRestoreIndices(iscol,&icol);CHKERRQ(ierr); 151606d414cSSatish Balay ierr = PetscFree(smap);CHKERRQ(ierr); 152606d414cSSatish Balay ierr = PetscFree(lens);CHKERRQ(ierr); 1536d4a8577SBarry Smith ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1546d4a8577SBarry Smith ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 155736121d4SSatish Balay 156736121d4SSatish Balay ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr); 157736121d4SSatish Balay *B = C; 1583a40ed3dSBarry Smith PetscFunctionReturn(0); 159736121d4SSatish Balay } 160736121d4SSatish Balay 1614a2ae208SSatish Balay #undef __FUNCT__ 1624a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrix_SeqBAIJ" 163690b6cddSBarry Smith PetscErrorCode MatGetSubMatrix_SeqBAIJ(Mat A,IS isrow,IS iscol,PetscInt cs,MatReuse scall,Mat *B) 164218c64b6SSatish Balay { 165218c64b6SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 166218c64b6SSatish Balay IS is1,is2; 1676849ba73SBarry Smith PetscErrorCode ierr; 168521d7252SBarry Smith PetscInt *vary,*iary,*irow,*icol,nrows,ncols,i,bs=A->bs,count; 169218c64b6SSatish Balay 1703a40ed3dSBarry Smith PetscFunctionBegin; 171218c64b6SSatish Balay ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr); 172218c64b6SSatish Balay ierr = ISGetIndices(iscol,&icol);CHKERRQ(ierr); 173b9b97703SBarry Smith ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr); 174b9b97703SBarry Smith ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr); 175218c64b6SSatish Balay 176218c64b6SSatish Balay /* Verify if the indices corespond to each element in a block 177218c64b6SSatish Balay and form the IS with compressed IS */ 178690b6cddSBarry Smith ierr = PetscMalloc(2*(a->mbs+1)*sizeof(PetscInt),&vary);CHKERRQ(ierr); 179218c64b6SSatish Balay iary = vary + a->mbs; 180690b6cddSBarry Smith ierr = PetscMemzero(vary,(a->mbs)*sizeof(PetscInt));CHKERRQ(ierr); 181218c64b6SSatish Balay for (i=0; i<nrows; i++) vary[irow[i]/bs]++; 182218c64b6SSatish Balay count = 0; 183218c64b6SSatish Balay for (i=0; i<a->mbs; i++) { 184634064b4SBarry Smith if (vary[i]!=0 && vary[i]!=bs) SETERRQ(PETSC_ERR_ARG_SIZ,"Index set does not match blocks"); 185218c64b6SSatish Balay if (vary[i]==bs) iary[count++] = i; 186218c64b6SSatish Balay } 187029af93fSBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,count,iary,&is1);CHKERRQ(ierr); 188218c64b6SSatish Balay 189690b6cddSBarry Smith ierr = PetscMemzero(vary,(a->mbs)*sizeof(PetscInt));CHKERRQ(ierr); 190218c64b6SSatish Balay for (i=0; i<ncols; i++) vary[icol[i]/bs]++; 191218c64b6SSatish Balay count = 0; 192218c64b6SSatish Balay for (i=0; i<a->mbs; i++) { 193634064b4SBarry Smith if (vary[i]!=0 && vary[i]!=bs) SETERRQ(PETSC_ERR_PLIB,"Internal error in PETSc"); 194218c64b6SSatish Balay if (vary[i]==bs) iary[count++] = i; 195218c64b6SSatish Balay } 196029af93fSBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,count,iary,&is2);CHKERRQ(ierr); 197218c64b6SSatish Balay ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr); 198218c64b6SSatish Balay ierr = ISRestoreIndices(iscol,&icol);CHKERRQ(ierr); 199606d414cSSatish Balay ierr = PetscFree(vary);CHKERRQ(ierr); 200218c64b6SSatish Balay 2016a6a5d1dSBarry Smith ierr = MatGetSubMatrix_SeqBAIJ_Private(A,is1,is2,cs,scall,B);CHKERRQ(ierr); 202218c64b6SSatish Balay ISDestroy(is1); 203218c64b6SSatish Balay ISDestroy(is2); 2043a40ed3dSBarry Smith PetscFunctionReturn(0); 205218c64b6SSatish Balay } 206218c64b6SSatish Balay 2074a2ae208SSatish Balay #undef __FUNCT__ 2084a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrices_SeqBAIJ" 209690b6cddSBarry Smith PetscErrorCode MatGetSubMatrices_SeqBAIJ(Mat A,PetscInt n,const IS irow[],const IS icol[],MatReuse scall,Mat *B[]) 210736121d4SSatish Balay { 2116849ba73SBarry Smith PetscErrorCode ierr; 212690b6cddSBarry Smith PetscInt i; 213736121d4SSatish Balay 2143a40ed3dSBarry Smith PetscFunctionBegin; 215736121d4SSatish Balay if (scall == MAT_INITIAL_MATRIX) { 21682502324SSatish Balay ierr = PetscMalloc((n+1)*sizeof(Mat),B);CHKERRQ(ierr); 217736121d4SSatish Balay } 218736121d4SSatish Balay 219736121d4SSatish Balay for (i=0; i<n; i++) { 2206a6a5d1dSBarry Smith ierr = MatGetSubMatrix_SeqBAIJ(A,irow[i],icol[i],PETSC_DECIDE,scall,&(*B)[i]);CHKERRQ(ierr); 221736121d4SSatish Balay } 2223a40ed3dSBarry Smith PetscFunctionReturn(0); 223736121d4SSatish Balay } 224218c64b6SSatish Balay 225218c64b6SSatish Balay 2262d61bbb3SSatish Balay /* -------------------------------------------------------*/ 2272d61bbb3SSatish Balay /* Should check that shapes of vectors and matrices match */ 2282d61bbb3SSatish Balay /* -------------------------------------------------------*/ 229d9eff348SSatish Balay #include "petscblaslapack.h" 2302d61bbb3SSatish Balay 2314a2ae208SSatish Balay #undef __FUNCT__ 2324a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_1" 233dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_1(Mat A,Vec xx,Vec zz) 2342d61bbb3SSatish Balay { 2352d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 23687828ca2SBarry Smith PetscScalar *x,*z,sum; 2373f1db9ecSBarry Smith MatScalar *v; 2386849ba73SBarry Smith PetscErrorCode ierr; 2397b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,n,*ridx=PETSC_NULL; 24026e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 2412d61bbb3SSatish Balay 2422d61bbb3SSatish Balay PetscFunctionBegin; 2431ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 2441ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 2452d61bbb3SSatish Balay 2462d61bbb3SSatish Balay idx = a->j; 2472d61bbb3SSatish Balay v = a->a; 24826e093fcSHong Zhang if (usecprow){ 24926e093fcSHong Zhang mbs = a->compressedrow.nrows; 25026e093fcSHong Zhang ii = a->compressedrow.i; 2517b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 25226e093fcSHong Zhang } else { 25326e093fcSHong Zhang mbs = a->mbs; 2542d61bbb3SSatish Balay ii = a->i; 25526e093fcSHong Zhang } 2562d61bbb3SSatish Balay 2572d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 2582d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 2592d61bbb3SSatish Balay sum = 0.0; 2602d61bbb3SSatish Balay while (n--) sum += *v++ * x[*idx++]; 26126e093fcSHong Zhang if (usecprow){ 2627b2bb3b9SHong Zhang z[ridx[i]] = sum; 26326e093fcSHong Zhang } else { 2642d61bbb3SSatish Balay z[i] = sum; 2652d61bbb3SSatish Balay } 26626e093fcSHong Zhang } 2671ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 2681ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 269efee365bSSatish Balay ierr = PetscLogFlops(2*a->nz - mbs);CHKERRQ(ierr); 2702d61bbb3SSatish Balay PetscFunctionReturn(0); 2712d61bbb3SSatish Balay } 2722d61bbb3SSatish Balay 2734a2ae208SSatish Balay #undef __FUNCT__ 2744a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_2" 275dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_2(Mat A,Vec xx,Vec zz) 2762d61bbb3SSatish Balay { 2772d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 278dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,sum1,sum2,*zarray; 27987828ca2SBarry Smith PetscScalar x1,x2; 2803f1db9ecSBarry Smith MatScalar *v; 281dfbe8321SBarry Smith PetscErrorCode ierr; 2827b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 28326e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 2842d61bbb3SSatish Balay 2852d61bbb3SSatish Balay PetscFunctionBegin; 2861ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 28726e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 2882d61bbb3SSatish Balay 2892d61bbb3SSatish Balay idx = a->j; 2902d61bbb3SSatish Balay v = a->a; 29126e093fcSHong Zhang if (usecprow){ 29226e093fcSHong Zhang mbs = a->compressedrow.nrows; 29326e093fcSHong Zhang ii = a->compressedrow.i; 2947b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 29526e093fcSHong Zhang } else { 29626e093fcSHong Zhang mbs = a->mbs; 2972d61bbb3SSatish Balay ii = a->i; 29826e093fcSHong Zhang z = zarray; 29926e093fcSHong Zhang } 3002d61bbb3SSatish Balay 3012d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 3022d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 3032d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; 3042d61bbb3SSatish Balay for (j=0; j<n; j++) { 3052d61bbb3SSatish Balay xb = x + 2*(*idx++); x1 = xb[0]; x2 = xb[1]; 3062d61bbb3SSatish Balay sum1 += v[0]*x1 + v[2]*x2; 3072d61bbb3SSatish Balay sum2 += v[1]*x1 + v[3]*x2; 3082d61bbb3SSatish Balay v += 4; 3092d61bbb3SSatish Balay } 3107b2bb3b9SHong Zhang if (usecprow) z = zarray + 2*ridx[i]; 3112d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; 31226e093fcSHong Zhang if (!usecprow) z += 2; 3132d61bbb3SSatish Balay } 3141ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 31526e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 316efee365bSSatish Balay ierr = PetscLogFlops(8*a->nz - 2*mbs);CHKERRQ(ierr); 3172d61bbb3SSatish Balay PetscFunctionReturn(0); 3182d61bbb3SSatish Balay } 3192d61bbb3SSatish Balay 3204a2ae208SSatish Balay #undef __FUNCT__ 3214a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_3" 322dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_3(Mat A,Vec xx,Vec zz) 3232d61bbb3SSatish Balay { 3242d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 325dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,sum1,sum2,sum3,x1,x2,x3,*zarray; 3263f1db9ecSBarry Smith MatScalar *v; 327dfbe8321SBarry Smith PetscErrorCode ierr; 3287b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 32926e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 33026e093fcSHong Zhang 3312d61bbb3SSatish Balay 332b6410449SSatish Balay #if defined(PETSC_HAVE_PRAGMA_DISJOINT) 333fee21e36SBarry Smith #pragma disjoint(*v,*z,*xb) 334fee21e36SBarry Smith #endif 335fee21e36SBarry Smith 3362d61bbb3SSatish Balay PetscFunctionBegin; 3371ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 33826e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 3392d61bbb3SSatish Balay 3402d61bbb3SSatish Balay idx = a->j; 3412d61bbb3SSatish Balay v = a->a; 34226e093fcSHong Zhang if (usecprow){ 34326e093fcSHong Zhang mbs = a->compressedrow.nrows; 34426e093fcSHong Zhang ii = a->compressedrow.i; 3457b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 34626e093fcSHong Zhang } else { 34726e093fcSHong Zhang mbs = a->mbs; 3482d61bbb3SSatish Balay ii = a->i; 34926e093fcSHong Zhang z = zarray; 35026e093fcSHong Zhang } 3512d61bbb3SSatish Balay 3522d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 3532d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 3542d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; 3552d61bbb3SSatish Balay for (j=0; j<n; j++) { 3562d61bbb3SSatish Balay xb = x + 3*(*idx++); x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 3572d61bbb3SSatish Balay sum1 += v[0]*x1 + v[3]*x2 + v[6]*x3; 3582d61bbb3SSatish Balay sum2 += v[1]*x1 + v[4]*x2 + v[7]*x3; 3592d61bbb3SSatish Balay sum3 += v[2]*x1 + v[5]*x2 + v[8]*x3; 3602d61bbb3SSatish Balay v += 9; 3612d61bbb3SSatish Balay } 3627b2bb3b9SHong Zhang if (usecprow) z = zarray + 3*ridx[i]; 3632d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; 36426e093fcSHong Zhang if (!usecprow) z += 3; 3652d61bbb3SSatish Balay } 3661ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 36726e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 368efee365bSSatish Balay ierr = PetscLogFlops(18*a->nz - 3*mbs);CHKERRQ(ierr); 3692d61bbb3SSatish Balay PetscFunctionReturn(0); 3702d61bbb3SSatish Balay } 3712d61bbb3SSatish Balay 3724a2ae208SSatish Balay #undef __FUNCT__ 3734a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_4" 374dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_4(Mat A,Vec xx,Vec zz) 3752d61bbb3SSatish Balay { 3762d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 377dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,sum1,sum2,sum3,sum4,x1,x2,x3,x4,*zarray; 3783f1db9ecSBarry Smith MatScalar *v; 379dfbe8321SBarry Smith PetscErrorCode ierr; 3807b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 38126e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 3822d61bbb3SSatish Balay 3832d61bbb3SSatish Balay PetscFunctionBegin; 3841ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 38526e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 3862d61bbb3SSatish Balay 3872d61bbb3SSatish Balay idx = a->j; 3882d61bbb3SSatish Balay v = a->a; 38926e093fcSHong Zhang if (usecprow){ 39026e093fcSHong Zhang mbs = a->compressedrow.nrows; 39126e093fcSHong Zhang ii = a->compressedrow.i; 3927b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 39326e093fcSHong Zhang } else { 39426e093fcSHong Zhang mbs = a->mbs; 3952d61bbb3SSatish Balay ii = a->i; 39626e093fcSHong Zhang z = zarray; 39726e093fcSHong Zhang } 3982d61bbb3SSatish Balay 3992d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 4002d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 4012d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; 4022d61bbb3SSatish Balay for (j=0; j<n; j++) { 4032d61bbb3SSatish Balay xb = x + 4*(*idx++); 4042d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 4052d61bbb3SSatish Balay sum1 += v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 4062d61bbb3SSatish Balay sum2 += v[1]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 4072d61bbb3SSatish Balay sum3 += v[2]*x1 + v[6]*x2 + v[10]*x3 + v[14]*x4; 4082d61bbb3SSatish Balay sum4 += v[3]*x1 + v[7]*x2 + v[11]*x3 + v[15]*x4; 4092d61bbb3SSatish Balay v += 16; 4102d61bbb3SSatish Balay } 4117b2bb3b9SHong Zhang if (usecprow) z = zarray + 4*ridx[i]; 4122d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; 41326e093fcSHong Zhang if (!usecprow) z += 4; 4142d61bbb3SSatish Balay } 4151ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 41626e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 417efee365bSSatish Balay ierr = PetscLogFlops(32*a->nz - 4*mbs);CHKERRQ(ierr); 4182d61bbb3SSatish Balay PetscFunctionReturn(0); 4192d61bbb3SSatish Balay } 4202d61bbb3SSatish Balay 4214a2ae208SSatish Balay #undef __FUNCT__ 4224a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_5" 423dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_5(Mat A,Vec xx,Vec zz) 4242d61bbb3SSatish Balay { 4252d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 426dcf5cc72SBarry Smith PetscScalar sum1,sum2,sum3,sum4,sum5,x1,x2,x3,x4,x5,*xb,*z = 0,*x,*zarray; 4273f1db9ecSBarry Smith MatScalar *v; 428dfbe8321SBarry Smith PetscErrorCode ierr; 4297b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 43026e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 4312d61bbb3SSatish Balay 432433994e6SBarry Smith PetscFunctionBegin; 4331ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 43426e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 4352d61bbb3SSatish Balay 4362d61bbb3SSatish Balay idx = a->j; 4372d61bbb3SSatish Balay v = a->a; 43826e093fcSHong Zhang if (usecprow){ 43926e093fcSHong Zhang mbs = a->compressedrow.nrows; 44026e093fcSHong Zhang ii = a->compressedrow.i; 4417b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 44226e093fcSHong Zhang } else { 44326e093fcSHong Zhang mbs = a->mbs; 4442d61bbb3SSatish Balay ii = a->i; 44526e093fcSHong Zhang z = zarray; 44626e093fcSHong Zhang } 4472d61bbb3SSatish Balay 4482d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 4492d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 4502d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; sum5 = 0.0; 4512d61bbb3SSatish Balay for (j=0; j<n; j++) { 4522d61bbb3SSatish Balay xb = x + 5*(*idx++); 4532d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; 4542d61bbb3SSatish Balay sum1 += v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4 + v[20]*x5; 4552d61bbb3SSatish Balay sum2 += v[1]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4 + v[21]*x5; 4562d61bbb3SSatish Balay sum3 += v[2]*x1 + v[7]*x2 + v[12]*x3 + v[17]*x4 + v[22]*x5; 4572d61bbb3SSatish Balay sum4 += v[3]*x1 + v[8]*x2 + v[13]*x3 + v[18]*x4 + v[23]*x5; 4582d61bbb3SSatish Balay sum5 += v[4]*x1 + v[9]*x2 + v[14]*x3 + v[19]*x4 + v[24]*x5; 4592d61bbb3SSatish Balay v += 25; 4602d61bbb3SSatish Balay } 4617b2bb3b9SHong Zhang if (usecprow) z = zarray + 5*ridx[i]; 4622d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; 46326e093fcSHong Zhang if (!usecprow) z += 5; 4642d61bbb3SSatish Balay } 4651ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 46626e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 467efee365bSSatish Balay ierr = PetscLogFlops(50*a->nz - 5*mbs);CHKERRQ(ierr); 4682d61bbb3SSatish Balay PetscFunctionReturn(0); 4692d61bbb3SSatish Balay } 4702d61bbb3SSatish Balay 47115091d37SBarry Smith 4724a2ae208SSatish Balay #undef __FUNCT__ 4734a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_6" 474dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_6(Mat A,Vec xx,Vec zz) 47515091d37SBarry Smith { 47615091d37SBarry Smith Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 477dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,sum6; 47826e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,*zarray; 47915091d37SBarry Smith MatScalar *v; 480dfbe8321SBarry Smith PetscErrorCode ierr; 4817b2bb3b9SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 48226e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 48315091d37SBarry Smith 484433994e6SBarry Smith PetscFunctionBegin; 4851ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 48626e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 48715091d37SBarry Smith 48815091d37SBarry Smith idx = a->j; 48915091d37SBarry Smith v = a->a; 49026e093fcSHong Zhang if (usecprow){ 49126e093fcSHong Zhang mbs = a->compressedrow.nrows; 49226e093fcSHong Zhang ii = a->compressedrow.i; 4937b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 49426e093fcSHong Zhang } else { 49526e093fcSHong Zhang mbs = a->mbs; 49615091d37SBarry Smith ii = a->i; 49726e093fcSHong Zhang z = zarray; 49826e093fcSHong Zhang } 49915091d37SBarry Smith 50015091d37SBarry Smith for (i=0; i<mbs; i++) { 50115091d37SBarry Smith n = ii[1] - ii[0]; ii++; 50215091d37SBarry Smith sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; sum5 = 0.0; sum6 = 0.0; 50315091d37SBarry Smith for (j=0; j<n; j++) { 50415091d37SBarry Smith xb = x + 6*(*idx++); 50515091d37SBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; 50615091d37SBarry Smith sum1 += v[0]*x1 + v[6]*x2 + v[12]*x3 + v[18]*x4 + v[24]*x5 + v[30]*x6; 50715091d37SBarry Smith sum2 += v[1]*x1 + v[7]*x2 + v[13]*x3 + v[19]*x4 + v[25]*x5 + v[31]*x6; 50815091d37SBarry Smith sum3 += v[2]*x1 + v[8]*x2 + v[14]*x3 + v[20]*x4 + v[26]*x5 + v[32]*x6; 50915091d37SBarry Smith sum4 += v[3]*x1 + v[9]*x2 + v[15]*x3 + v[21]*x4 + v[27]*x5 + v[33]*x6; 51015091d37SBarry Smith sum5 += v[4]*x1 + v[10]*x2 + v[16]*x3 + v[22]*x4 + v[28]*x5 + v[34]*x6; 51115091d37SBarry Smith sum6 += v[5]*x1 + v[11]*x2 + v[17]*x3 + v[23]*x4 + v[29]*x5 + v[35]*x6; 51215091d37SBarry Smith v += 36; 51315091d37SBarry Smith } 5147b2bb3b9SHong Zhang if (usecprow) z = zarray + 6*ridx[i]; 51515091d37SBarry Smith z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; 51626e093fcSHong Zhang if (!usecprow) z += 6; 51715091d37SBarry Smith } 51815091d37SBarry Smith 5191ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 52026e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 521efee365bSSatish Balay ierr = PetscLogFlops(72*a->nz - 6*mbs);CHKERRQ(ierr); 52215091d37SBarry Smith PetscFunctionReturn(0); 52315091d37SBarry Smith } 5244a2ae208SSatish Balay #undef __FUNCT__ 5254a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_7" 526dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_7(Mat A,Vec xx,Vec zz) 5272d61bbb3SSatish Balay { 5282d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 529dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,sum6,sum7; 53026e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,x7,*zarray; 5313f1db9ecSBarry Smith MatScalar *v; 532dfbe8321SBarry Smith PetscErrorCode ierr; 5337b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 53426e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 5352d61bbb3SSatish Balay 536433994e6SBarry Smith PetscFunctionBegin; 5371ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 53826e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 5392d61bbb3SSatish Balay 5402d61bbb3SSatish Balay idx = a->j; 5412d61bbb3SSatish Balay v = a->a; 54226e093fcSHong Zhang if (usecprow){ 54326e093fcSHong Zhang mbs = a->compressedrow.nrows; 54426e093fcSHong Zhang ii = a->compressedrow.i; 5457b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 54626e093fcSHong Zhang } else { 54726e093fcSHong Zhang mbs = a->mbs; 5482d61bbb3SSatish Balay ii = a->i; 54926e093fcSHong Zhang z = zarray; 55026e093fcSHong Zhang } 5512d61bbb3SSatish Balay 5522d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 5532d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 5542d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; sum5 = 0.0; sum6 = 0.0; sum7 = 0.0; 5552d61bbb3SSatish Balay for (j=0; j<n; j++) { 5562d61bbb3SSatish Balay xb = x + 7*(*idx++); 5572d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; x7 = xb[6]; 5582d61bbb3SSatish Balay sum1 += v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4 + v[28]*x5 + v[35]*x6 + v[42]*x7; 5592d61bbb3SSatish Balay sum2 += v[1]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4 + v[29]*x5 + v[36]*x6 + v[43]*x7; 5602d61bbb3SSatish Balay sum3 += v[2]*x1 + v[9]*x2 + v[16]*x3 + v[23]*x4 + v[30]*x5 + v[37]*x6 + v[44]*x7; 5612d61bbb3SSatish Balay sum4 += v[3]*x1 + v[10]*x2 + v[17]*x3 + v[24]*x4 + v[31]*x5 + v[38]*x6 + v[45]*x7; 5622d61bbb3SSatish Balay sum5 += v[4]*x1 + v[11]*x2 + v[18]*x3 + v[25]*x4 + v[32]*x5 + v[39]*x6 + v[46]*x7; 5632d61bbb3SSatish Balay sum6 += v[5]*x1 + v[12]*x2 + v[19]*x3 + v[26]*x4 + v[33]*x5 + v[40]*x6 + v[47]*x7; 5642d61bbb3SSatish Balay sum7 += v[6]*x1 + v[13]*x2 + v[20]*x3 + v[27]*x4 + v[34]*x5 + v[41]*x6 + v[48]*x7; 5652d61bbb3SSatish Balay v += 49; 5662d61bbb3SSatish Balay } 5677b2bb3b9SHong Zhang if (usecprow) z = zarray + 7*ridx[i]; 5682d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; z[6] = sum7; 56926e093fcSHong Zhang if (!usecprow) z += 7; 5702d61bbb3SSatish Balay } 5712d61bbb3SSatish Balay 5721ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 57326e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 574efee365bSSatish Balay ierr = PetscLogFlops(98*a->nz - 7*mbs);CHKERRQ(ierr); 5752d61bbb3SSatish Balay PetscFunctionReturn(0); 5762d61bbb3SSatish Balay } 5772d61bbb3SSatish Balay 5783f1db9ecSBarry Smith /* 5793f1db9ecSBarry Smith This will not work with MatScalar == float because it calls the BLAS 5803f1db9ecSBarry Smith */ 5814a2ae208SSatish Balay #undef __FUNCT__ 5824a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_N" 583dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_N(Mat A,Vec xx,Vec zz) 5842d61bbb3SSatish Balay { 5852d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 586dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,*work,*workt,*zarray; 5873f1db9ecSBarry Smith MatScalar *v; 588dfbe8321SBarry Smith PetscErrorCode ierr; 589521d7252SBarry Smith PetscInt mbs=a->mbs,i,*idx,*ii,bs=A->bs,j,n,bs2=a->bs2; 5907b2bb3b9SHong Zhang PetscInt ncols,k,*ridx=PETSC_NULL; 59126e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 5922d61bbb3SSatish Balay 5932d61bbb3SSatish Balay PetscFunctionBegin; 5941ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 59526e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 5962d61bbb3SSatish Balay 5972d61bbb3SSatish Balay idx = a->j; 5982d61bbb3SSatish Balay v = a->a; 59926e093fcSHong Zhang if (usecprow){ 60026e093fcSHong Zhang mbs = a->compressedrow.nrows; 60126e093fcSHong Zhang ii = a->compressedrow.i; 6027b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 60326e093fcSHong Zhang } else { 60426e093fcSHong Zhang mbs = a->mbs; 6052d61bbb3SSatish Balay ii = a->i; 60626e093fcSHong Zhang z = zarray; 60726e093fcSHong Zhang } 608218c64b6SSatish Balay 6092d61bbb3SSatish Balay if (!a->mult_work) { 610273d9f13SBarry Smith k = PetscMax(A->m,A->n); 61187828ca2SBarry Smith ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 6122d61bbb3SSatish Balay } 6132d61bbb3SSatish Balay work = a->mult_work; 6142d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 6152d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 6162d61bbb3SSatish Balay ncols = n*bs; 6172d61bbb3SSatish Balay workt = work; 6182d61bbb3SSatish Balay for (j=0; j<n; j++) { 6192d61bbb3SSatish Balay xb = x + bs*(*idx++); 6202d61bbb3SSatish Balay for (k=0; k<bs; k++) workt[k] = xb[k]; 6212d61bbb3SSatish Balay workt += bs; 6222d61bbb3SSatish Balay } 6237b2bb3b9SHong Zhang if (usecprow) z = zarray + bs*ridx[i]; 624737d121aSSatish Balay Kernel_w_gets_Ar_times_v(bs,ncols,work,v,z); 62571044d3cSBarry Smith /* BLASgemv_("N",&bs,&ncols,&_DOne,v,&bs,work,&_One,&_DZero,z,&_One); */ 6262d61bbb3SSatish Balay v += n*bs2; 62726e093fcSHong Zhang if (!usecprow) z += bs; 6282d61bbb3SSatish Balay } 6291ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 63026e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 631efee365bSSatish Balay ierr = PetscLogFlops(2*a->nz*bs2 - bs*mbs);CHKERRQ(ierr); 6322d61bbb3SSatish Balay PetscFunctionReturn(0); 6332d61bbb3SSatish Balay } 6342d61bbb3SSatish Balay 6354a2ae208SSatish Balay #undef __FUNCT__ 6364a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_1" 637dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_1(Mat A,Vec xx,Vec yy,Vec zz) 6382d61bbb3SSatish Balay { 6392d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 640dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,sum,*yarray,*zarray; 6413f1db9ecSBarry Smith MatScalar *v; 642dfbe8321SBarry Smith PetscErrorCode ierr; 6434eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,n,*ridx=PETSC_NULL; 64426e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 6452d61bbb3SSatish Balay 6462d61bbb3SSatish Balay PetscFunctionBegin; 6471ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 64826e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 6492e8a6d31SBarry Smith if (zz != yy) { 65026e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 6512e8a6d31SBarry Smith } else { 65226e093fcSHong Zhang zarray = yarray; 6532e8a6d31SBarry Smith } 6542d61bbb3SSatish Balay 6552d61bbb3SSatish Balay idx = a->j; 6562d61bbb3SSatish Balay v = a->a; 65726e093fcSHong Zhang if (usecprow){ 6584eb6d288SHong Zhang if (zz != yy){ 6594eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,mbs*sizeof(PetscScalar));CHKERRQ(ierr); 6604eb6d288SHong Zhang } 66126e093fcSHong Zhang mbs = a->compressedrow.nrows; 66226e093fcSHong Zhang ii = a->compressedrow.i; 6637b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 66426e093fcSHong Zhang } else { 6652d61bbb3SSatish Balay ii = a->i; 66626e093fcSHong Zhang y = yarray; 66726e093fcSHong Zhang z = zarray; 66826e093fcSHong Zhang } 6692d61bbb3SSatish Balay 6702d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 6712d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 67226e093fcSHong Zhang if (usecprow){ 6737b2bb3b9SHong Zhang z = zarray + ridx[i]; 6747b2bb3b9SHong Zhang y = yarray + ridx[i]; 67526e093fcSHong Zhang } 67626e093fcSHong Zhang sum = y[0]; 6772d61bbb3SSatish Balay while (n--) sum += *v++ * x[*idx++]; 67826e093fcSHong Zhang z[0] = sum; 67926e093fcSHong Zhang if (!usecprow){ 68026e093fcSHong Zhang z++; y++; 68126e093fcSHong Zhang } 6822d61bbb3SSatish Balay } 6831ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 68426e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 6852e8a6d31SBarry Smith if (zz != yy) { 68626e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 6872e8a6d31SBarry Smith } 688efee365bSSatish Balay ierr = PetscLogFlops(2*a->nz);CHKERRQ(ierr); 6892d61bbb3SSatish Balay PetscFunctionReturn(0); 6902d61bbb3SSatish Balay } 6912d61bbb3SSatish Balay 6924a2ae208SSatish Balay #undef __FUNCT__ 6934a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_2" 694dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 6952d61bbb3SSatish Balay { 6962d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 697dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2; 69826e093fcSHong Zhang PetscScalar x1,x2,*yarray,*zarray; 6993f1db9ecSBarry Smith MatScalar *v; 700dfbe8321SBarry Smith PetscErrorCode ierr; 7014eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 70226e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 7032d61bbb3SSatish Balay 7042d61bbb3SSatish Balay PetscFunctionBegin; 7051ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 70626e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 7072e8a6d31SBarry Smith if (zz != yy) { 70826e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 7092e8a6d31SBarry Smith } else { 71026e093fcSHong Zhang zarray = yarray; 7112e8a6d31SBarry Smith } 7122d61bbb3SSatish Balay 7132d61bbb3SSatish Balay idx = a->j; 7142d61bbb3SSatish Balay v = a->a; 71526e093fcSHong Zhang if (usecprow){ 7164eb6d288SHong Zhang if (zz != yy){ 7174eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,2*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 7184eb6d288SHong Zhang } 71926e093fcSHong Zhang mbs = a->compressedrow.nrows; 72026e093fcSHong Zhang ii = a->compressedrow.i; 7217b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 7224eb6d288SHong Zhang if (zz != yy){ 7234eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,a->mbs*sizeof(PetscScalar));CHKERRQ(ierr); 7244eb6d288SHong Zhang } 72526e093fcSHong Zhang } else { 7262d61bbb3SSatish Balay ii = a->i; 72726e093fcSHong Zhang y = yarray; 72826e093fcSHong Zhang z = zarray; 72926e093fcSHong Zhang } 7302d61bbb3SSatish Balay 7312d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 7322d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 73326e093fcSHong Zhang if (usecprow){ 7347b2bb3b9SHong Zhang z = zarray + 2*ridx[i]; 7357b2bb3b9SHong Zhang y = yarray + 2*ridx[i]; 73626e093fcSHong Zhang } 7372d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; 7382d61bbb3SSatish Balay for (j=0; j<n; j++) { 7392d61bbb3SSatish Balay xb = x + 2*(*idx++); x1 = xb[0]; x2 = xb[1]; 7402d61bbb3SSatish Balay sum1 += v[0]*x1 + v[2]*x2; 7412d61bbb3SSatish Balay sum2 += v[1]*x1 + v[3]*x2; 7422d61bbb3SSatish Balay v += 4; 7432d61bbb3SSatish Balay } 7442d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; 74526e093fcSHong Zhang if (!usecprow){ 7462d61bbb3SSatish Balay z += 2; y += 2; 7472d61bbb3SSatish Balay } 74826e093fcSHong Zhang } 7491ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 75026e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 7512e8a6d31SBarry Smith if (zz != yy) { 75226e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 7532e8a6d31SBarry Smith } 754efee365bSSatish Balay ierr = PetscLogFlops(4*a->nz);CHKERRQ(ierr); 7552d61bbb3SSatish Balay PetscFunctionReturn(0); 7562d61bbb3SSatish Balay } 7572d61bbb3SSatish Balay 7584a2ae208SSatish Balay #undef __FUNCT__ 7594a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_3" 760dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 7612d61bbb3SSatish Balay { 7622d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 763dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,x1,x2,x3,*yarray,*zarray; 7643f1db9ecSBarry Smith MatScalar *v; 765dfbe8321SBarry Smith PetscErrorCode ierr; 7664eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 76726e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 7682d61bbb3SSatish Balay 7692d61bbb3SSatish Balay PetscFunctionBegin; 7701ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 77126e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 7722e8a6d31SBarry Smith if (zz != yy) { 77326e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 7742e8a6d31SBarry Smith } else { 77526e093fcSHong Zhang zarray = yarray; 7762e8a6d31SBarry Smith } 7772d61bbb3SSatish Balay 7782d61bbb3SSatish Balay idx = a->j; 7792d61bbb3SSatish Balay v = a->a; 78026e093fcSHong Zhang if (usecprow){ 7814eb6d288SHong Zhang if (zz != yy){ 7824eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,3*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 7834eb6d288SHong Zhang } 78426e093fcSHong Zhang mbs = a->compressedrow.nrows; 78526e093fcSHong Zhang ii = a->compressedrow.i; 7867b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 78726e093fcSHong Zhang } else { 7882d61bbb3SSatish Balay ii = a->i; 78926e093fcSHong Zhang y = yarray; 79026e093fcSHong Zhang z = zarray; 79126e093fcSHong Zhang } 7922d61bbb3SSatish Balay 7932d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 7942d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 79526e093fcSHong Zhang if (usecprow){ 7967b2bb3b9SHong Zhang z = zarray + 3*ridx[i]; 7977b2bb3b9SHong Zhang y = yarray + 3*ridx[i]; 79826e093fcSHong Zhang } 7992d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; 8002d61bbb3SSatish Balay for (j=0; j<n; j++) { 8012d61bbb3SSatish Balay xb = x + 3*(*idx++); x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 8022d61bbb3SSatish Balay sum1 += v[0]*x1 + v[3]*x2 + v[6]*x3; 8032d61bbb3SSatish Balay sum2 += v[1]*x1 + v[4]*x2 + v[7]*x3; 8042d61bbb3SSatish Balay sum3 += v[2]*x1 + v[5]*x2 + v[8]*x3; 8052d61bbb3SSatish Balay v += 9; 8062d61bbb3SSatish Balay } 8072d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; 80826e093fcSHong Zhang if (!usecprow){ 8092d61bbb3SSatish Balay z += 3; y += 3; 8102d61bbb3SSatish Balay } 81126e093fcSHong Zhang } 8121ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 81326e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 8142e8a6d31SBarry Smith if (zz != yy) { 81526e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 8162e8a6d31SBarry Smith } 817efee365bSSatish Balay ierr = PetscLogFlops(18*a->nz);CHKERRQ(ierr); 8182d61bbb3SSatish Balay PetscFunctionReturn(0); 8192d61bbb3SSatish Balay } 8202d61bbb3SSatish Balay 8214a2ae208SSatish Balay #undef __FUNCT__ 8224a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_4" 823dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 8242d61bbb3SSatish Balay { 8252d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 826dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,x1,x2,x3,x4,*yarray,*zarray; 8273f1db9ecSBarry Smith MatScalar *v; 828dfbe8321SBarry Smith PetscErrorCode ierr; 8294eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 83026e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 8312d61bbb3SSatish Balay 8322d61bbb3SSatish Balay PetscFunctionBegin; 8331ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 83426e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 8352e8a6d31SBarry Smith if (zz != yy) { 83626e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 8372e8a6d31SBarry Smith } else { 83826e093fcSHong Zhang zarray = yarray; 8392e8a6d31SBarry Smith } 8402d61bbb3SSatish Balay 8412d61bbb3SSatish Balay idx = a->j; 8422d61bbb3SSatish Balay v = a->a; 84326e093fcSHong Zhang if (usecprow){ 8444eb6d288SHong Zhang if (zz != yy){ 8454eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,4*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 8464eb6d288SHong Zhang } 84726e093fcSHong Zhang mbs = a->compressedrow.nrows; 84826e093fcSHong Zhang ii = a->compressedrow.i; 8497b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 85026e093fcSHong Zhang } else { 8512d61bbb3SSatish Balay ii = a->i; 85226e093fcSHong Zhang y = yarray; 85326e093fcSHong Zhang z = zarray; 85426e093fcSHong Zhang } 8552d61bbb3SSatish Balay 8562d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 8572d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 85826e093fcSHong Zhang if (usecprow){ 8597b2bb3b9SHong Zhang z = zarray + 4*ridx[i]; 8607b2bb3b9SHong Zhang y = yarray + 4*ridx[i]; 86126e093fcSHong Zhang } 8622d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; 8632d61bbb3SSatish Balay for (j=0; j<n; j++) { 8642d61bbb3SSatish Balay xb = x + 4*(*idx++); 8652d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 8662d61bbb3SSatish Balay sum1 += v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 8672d61bbb3SSatish Balay sum2 += v[1]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 8682d61bbb3SSatish Balay sum3 += v[2]*x1 + v[6]*x2 + v[10]*x3 + v[14]*x4; 8692d61bbb3SSatish Balay sum4 += v[3]*x1 + v[7]*x2 + v[11]*x3 + v[15]*x4; 8702d61bbb3SSatish Balay v += 16; 8712d61bbb3SSatish Balay } 8722d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; 87326e093fcSHong Zhang if (!usecprow){ 8742d61bbb3SSatish Balay z += 4; y += 4; 8752d61bbb3SSatish Balay } 87626e093fcSHong Zhang } 8771ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 87826e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 8792e8a6d31SBarry Smith if (zz != yy) { 88026e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 8812e8a6d31SBarry Smith } 882efee365bSSatish Balay ierr = PetscLogFlops(32*a->nz);CHKERRQ(ierr); 8832d61bbb3SSatish Balay PetscFunctionReturn(0); 8842d61bbb3SSatish Balay } 8852d61bbb3SSatish Balay 8864a2ae208SSatish Balay #undef __FUNCT__ 8874a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_5" 888dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 8892d61bbb3SSatish Balay { 8902d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 891dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,x1,x2,x3,x4,x5; 89226e093fcSHong Zhang PetscScalar *yarray,*zarray; 8933f1db9ecSBarry Smith MatScalar *v; 894dfbe8321SBarry Smith PetscErrorCode ierr; 8954eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 89626e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 8972d61bbb3SSatish Balay 8982d61bbb3SSatish Balay PetscFunctionBegin; 8991ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 90026e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 9012e8a6d31SBarry Smith if (zz != yy) { 90226e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 9032e8a6d31SBarry Smith } else { 90426e093fcSHong Zhang zarray = yarray; 9052e8a6d31SBarry Smith } 9062d61bbb3SSatish Balay 9072d61bbb3SSatish Balay idx = a->j; 9082d61bbb3SSatish Balay v = a->a; 90926e093fcSHong Zhang if (usecprow){ 9104eb6d288SHong Zhang if (zz != yy){ 9114eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,5*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 9124eb6d288SHong Zhang } 91326e093fcSHong Zhang mbs = a->compressedrow.nrows; 91426e093fcSHong Zhang ii = a->compressedrow.i; 9157b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 91626e093fcSHong Zhang } else { 9172d61bbb3SSatish Balay ii = a->i; 91826e093fcSHong Zhang y = yarray; 91926e093fcSHong Zhang z = zarray; 92026e093fcSHong Zhang } 9212d61bbb3SSatish Balay 9222d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 9232d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 92426e093fcSHong Zhang if (usecprow){ 9257b2bb3b9SHong Zhang z = zarray + 5*ridx[i]; 9267b2bb3b9SHong Zhang y = yarray + 5*ridx[i]; 92726e093fcSHong Zhang } 9282d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; sum5 = y[4]; 9292d61bbb3SSatish Balay for (j=0; j<n; j++) { 9302d61bbb3SSatish Balay xb = x + 5*(*idx++); 9312d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; 9322d61bbb3SSatish Balay sum1 += v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4 + v[20]*x5; 9332d61bbb3SSatish Balay sum2 += v[1]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4 + v[21]*x5; 9342d61bbb3SSatish Balay sum3 += v[2]*x1 + v[7]*x2 + v[12]*x3 + v[17]*x4 + v[22]*x5; 9352d61bbb3SSatish Balay sum4 += v[3]*x1 + v[8]*x2 + v[13]*x3 + v[18]*x4 + v[23]*x5; 9362d61bbb3SSatish Balay sum5 += v[4]*x1 + v[9]*x2 + v[14]*x3 + v[19]*x4 + v[24]*x5; 9372d61bbb3SSatish Balay v += 25; 9382d61bbb3SSatish Balay } 9392d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; 94026e093fcSHong Zhang if (!usecprow){ 9412d61bbb3SSatish Balay z += 5; y += 5; 9422d61bbb3SSatish Balay } 94326e093fcSHong Zhang } 9441ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 94526e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 9462e8a6d31SBarry Smith if (zz != yy) { 94726e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 9482e8a6d31SBarry Smith } 949efee365bSSatish Balay ierr = PetscLogFlops(50*a->nz);CHKERRQ(ierr); 9502d61bbb3SSatish Balay PetscFunctionReturn(0); 9512d61bbb3SSatish Balay } 9524a2ae208SSatish Balay #undef __FUNCT__ 9534a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_6" 954dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 95515091d37SBarry Smith { 95615091d37SBarry Smith Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 957dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,sum6; 95826e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,*yarray,*zarray; 95915091d37SBarry Smith MatScalar *v; 960dfbe8321SBarry Smith PetscErrorCode ierr; 9614eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 96226e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 96315091d37SBarry Smith 96415091d37SBarry Smith PetscFunctionBegin; 9651ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 96626e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 96715091d37SBarry Smith if (zz != yy) { 96826e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 96915091d37SBarry Smith } else { 97026e093fcSHong Zhang zarray = yarray; 97115091d37SBarry Smith } 97215091d37SBarry Smith 97315091d37SBarry Smith idx = a->j; 97415091d37SBarry Smith v = a->a; 97526e093fcSHong Zhang if (usecprow){ 9764eb6d288SHong Zhang if (zz != yy){ 9774eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,6*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 9784eb6d288SHong Zhang } 97926e093fcSHong Zhang mbs = a->compressedrow.nrows; 98026e093fcSHong Zhang ii = a->compressedrow.i; 9817b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 98226e093fcSHong Zhang } else { 98315091d37SBarry Smith ii = a->i; 98426e093fcSHong Zhang y = yarray; 98526e093fcSHong Zhang z = zarray; 98626e093fcSHong Zhang } 98715091d37SBarry Smith 98815091d37SBarry Smith for (i=0; i<mbs; i++) { 98915091d37SBarry Smith n = ii[1] - ii[0]; ii++; 99026e093fcSHong Zhang if (usecprow){ 9917b2bb3b9SHong Zhang z = zarray + 6*ridx[i]; 9927b2bb3b9SHong Zhang y = yarray + 6*ridx[i]; 99326e093fcSHong Zhang } 99415091d37SBarry Smith sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; sum5 = y[4]; sum6 = y[5]; 99515091d37SBarry Smith for (j=0; j<n; j++) { 9963b95cb0eSSatish Balay xb = x + 6*(*idx++); 99715091d37SBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; 99815091d37SBarry Smith sum1 += v[0]*x1 + v[6]*x2 + v[12]*x3 + v[18]*x4 + v[24]*x5 + v[30]*x6; 99915091d37SBarry Smith sum2 += v[1]*x1 + v[7]*x2 + v[13]*x3 + v[19]*x4 + v[25]*x5 + v[31]*x6; 100015091d37SBarry Smith sum3 += v[2]*x1 + v[8]*x2 + v[14]*x3 + v[20]*x4 + v[26]*x5 + v[32]*x6; 100115091d37SBarry Smith sum4 += v[3]*x1 + v[9]*x2 + v[15]*x3 + v[21]*x4 + v[27]*x5 + v[33]*x6; 100215091d37SBarry Smith sum5 += v[4]*x1 + v[10]*x2 + v[16]*x3 + v[22]*x4 + v[28]*x5 + v[34]*x6; 100315091d37SBarry Smith sum6 += v[5]*x1 + v[11]*x2 + v[17]*x3 + v[23]*x4 + v[29]*x5 + v[35]*x6; 100415091d37SBarry Smith v += 36; 100515091d37SBarry Smith } 100615091d37SBarry Smith z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; 100726e093fcSHong Zhang if (!usecprow){ 100815091d37SBarry Smith z += 6; y += 6; 100915091d37SBarry Smith } 101026e093fcSHong Zhang } 10111ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 101226e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 101315091d37SBarry Smith if (zz != yy) { 101426e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 101515091d37SBarry Smith } 1016efee365bSSatish Balay ierr = PetscLogFlops(72*a->nz);CHKERRQ(ierr); 101715091d37SBarry Smith PetscFunctionReturn(0); 101815091d37SBarry Smith } 10192d61bbb3SSatish Balay 10204a2ae208SSatish Balay #undef __FUNCT__ 10214a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_7" 1022dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 10232d61bbb3SSatish Balay { 10242d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1025dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,sum6,sum7; 102626e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,x7,*yarray,*zarray; 10273f1db9ecSBarry Smith MatScalar *v; 1028dfbe8321SBarry Smith PetscErrorCode ierr; 10297b2bb3b9SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 103026e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 10312d61bbb3SSatish Balay 10322d61bbb3SSatish Balay PetscFunctionBegin; 10331ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 103426e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 10352e8a6d31SBarry Smith if (zz != yy) { 103626e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 10372e8a6d31SBarry Smith } else { 103826e093fcSHong Zhang zarray = yarray; 10392e8a6d31SBarry Smith } 10402d61bbb3SSatish Balay 10412d61bbb3SSatish Balay idx = a->j; 10422d61bbb3SSatish Balay v = a->a; 104326e093fcSHong Zhang if (usecprow){ 10444eb6d288SHong Zhang if (zz != yy){ 10454eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,7*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 10464eb6d288SHong Zhang } 104726e093fcSHong Zhang mbs = a->compressedrow.nrows; 104826e093fcSHong Zhang ii = a->compressedrow.i; 10497b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 105026e093fcSHong Zhang } else { 10512d61bbb3SSatish Balay ii = a->i; 105226e093fcSHong Zhang y = yarray; 105326e093fcSHong Zhang z = zarray; 105426e093fcSHong Zhang } 10552d61bbb3SSatish Balay 10562d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 10572d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 105826e093fcSHong Zhang if (usecprow){ 10597b2bb3b9SHong Zhang z = zarray + 7*ridx[i]; 10607b2bb3b9SHong Zhang y = yarray + 7*ridx[i]; 106126e093fcSHong Zhang } 10622d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; sum5 = y[4]; sum6 = y[5]; sum7 = y[6]; 10632d61bbb3SSatish Balay for (j=0; j<n; j++) { 10642d61bbb3SSatish Balay xb = x + 7*(*idx++); 10652d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; x7 = xb[6]; 10662d61bbb3SSatish Balay sum1 += v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4 + v[28]*x5 + v[35]*x6 + v[42]*x7; 10672d61bbb3SSatish Balay sum2 += v[1]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4 + v[29]*x5 + v[36]*x6 + v[43]*x7; 10682d61bbb3SSatish Balay sum3 += v[2]*x1 + v[9]*x2 + v[16]*x3 + v[23]*x4 + v[30]*x5 + v[37]*x6 + v[44]*x7; 10692d61bbb3SSatish Balay sum4 += v[3]*x1 + v[10]*x2 + v[17]*x3 + v[24]*x4 + v[31]*x5 + v[38]*x6 + v[45]*x7; 10702d61bbb3SSatish Balay sum5 += v[4]*x1 + v[11]*x2 + v[18]*x3 + v[25]*x4 + v[32]*x5 + v[39]*x6 + v[46]*x7; 10712d61bbb3SSatish Balay sum6 += v[5]*x1 + v[12]*x2 + v[19]*x3 + v[26]*x4 + v[33]*x5 + v[40]*x6 + v[47]*x7; 10722d61bbb3SSatish Balay sum7 += v[6]*x1 + v[13]*x2 + v[20]*x3 + v[27]*x4 + v[34]*x5 + v[41]*x6 + v[48]*x7; 10732d61bbb3SSatish Balay v += 49; 10742d61bbb3SSatish Balay } 10752d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; z[6] = sum7; 107626e093fcSHong Zhang if (!usecprow){ 10772d61bbb3SSatish Balay z += 7; y += 7; 10782d61bbb3SSatish Balay } 107926e093fcSHong Zhang } 10801ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 108126e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 10822e8a6d31SBarry Smith if (zz != yy) { 108326e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 10842e8a6d31SBarry Smith } 1085efee365bSSatish Balay ierr = PetscLogFlops(98*a->nz);CHKERRQ(ierr); 10862d61bbb3SSatish Balay PetscFunctionReturn(0); 10872d61bbb3SSatish Balay } 1088218c64b6SSatish Balay 10894a2ae208SSatish Balay #undef __FUNCT__ 10904a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_N" 1091dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_N(Mat A,Vec xx,Vec yy,Vec zz) 10922d61bbb3SSatish Balay { 10932d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1094*bba805e6SBarry Smith PetscScalar *x,*z = 0,*xb,*work,*workt,*zarray; 10953f1db9ecSBarry Smith MatScalar *v; 10966849ba73SBarry Smith PetscErrorCode ierr; 109726e093fcSHong Zhang PetscInt mbs,i,*idx,*ii,bs=A->bs,j,n,bs2=a->bs2; 10987b2bb3b9SHong Zhang PetscInt ncols,k,*ridx=PETSC_NULL; 109926e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 1100218c64b6SSatish Balay 11012d61bbb3SSatish Balay PetscFunctionBegin; 1102*bba805e6SBarry Smith ierr = VecCopy(yy,zz);CHKERRQ(ierr); 11031ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 110426e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 11052d61bbb3SSatish Balay 11062d61bbb3SSatish Balay idx = a->j; 11072d61bbb3SSatish Balay v = a->a; 110826e093fcSHong Zhang if (usecprow){ 110926e093fcSHong Zhang mbs = a->compressedrow.nrows; 111026e093fcSHong Zhang ii = a->compressedrow.i; 11117b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 111226e093fcSHong Zhang } else { 111326e093fcSHong Zhang mbs = a->mbs; 11142d61bbb3SSatish Balay ii = a->i; 111526e093fcSHong Zhang z = zarray; 111626e093fcSHong Zhang } 11172d61bbb3SSatish Balay 11182d61bbb3SSatish Balay if (!a->mult_work) { 1119273d9f13SBarry Smith k = PetscMax(A->m,A->n); 112087828ca2SBarry Smith ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 11212d61bbb3SSatish Balay } 11222d61bbb3SSatish Balay work = a->mult_work; 11232d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 11242d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 11252d61bbb3SSatish Balay ncols = n*bs; 11262d61bbb3SSatish Balay workt = work; 11272d61bbb3SSatish Balay for (j=0; j<n; j++) { 11282d61bbb3SSatish Balay xb = x + bs*(*idx++); 11292d61bbb3SSatish Balay for (k=0; k<bs; k++) workt[k] = xb[k]; 11302d61bbb3SSatish Balay workt += bs; 11312d61bbb3SSatish Balay } 11327b2bb3b9SHong Zhang if (usecprow) z = zarray + bs*ridx[i]; 11333f1db9ecSBarry Smith Kernel_w_gets_w_plus_Ar_times_v(bs,ncols,work,v,z); 113471044d3cSBarry Smith /* BLASgemv_("N",&bs,&ncols,&_DOne,v,&bs,work,&_One,&_DOne,z,&_One); */ 11352d61bbb3SSatish Balay v += n*bs2; 113626e093fcSHong Zhang if (!usecprow){ 11372d61bbb3SSatish Balay z += bs; 11382d61bbb3SSatish Balay } 113926e093fcSHong Zhang } 11401ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 114126e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 1142efee365bSSatish Balay ierr = PetscLogFlops(2*a->nz*bs2);CHKERRQ(ierr); 11432d61bbb3SSatish Balay PetscFunctionReturn(0); 11442d61bbb3SSatish Balay } 11452d61bbb3SSatish Balay 11464a2ae208SSatish Balay #undef __FUNCT__ 11474a2ae208SSatish Balay #define __FUNCT__ "MatMultTranspose_SeqBAIJ" 1148dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqBAIJ(Mat A,Vec xx,Vec zz) 11492d61bbb3SSatish Balay { 11503447b6efSHong Zhang PetscScalar zero = 0.0; 11516849ba73SBarry Smith PetscErrorCode ierr; 1152e8e7597cSSatish Balay #if defined (PETSC_USE_LOG) 1153e8e7597cSSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1154e8e7597cSSatish Balay #endif 11552d61bbb3SSatish Balay 11562d61bbb3SSatish Balay PetscFunctionBegin; 11572dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 11583447b6efSHong Zhang ierr = MatMultTransposeAdd_SeqBAIJ(A,xx,zz,zz);CHKERRQ(ierr); 11592d61bbb3SSatish Balay 1160efee365bSSatish Balay ierr = PetscLogFlops(2*a->nz*a->bs2 - A->n);CHKERRQ(ierr); 11612d61bbb3SSatish Balay PetscFunctionReturn(0); 11622d61bbb3SSatish Balay } 11632d61bbb3SSatish Balay 11644a2ae208SSatish Balay #undef __FUNCT__ 11654a2ae208SSatish Balay #define __FUNCT__ "MatMultTransposeAdd_SeqBAIJ" 1166dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqBAIJ(Mat A,Vec xx,Vec yy,Vec zz) 11672d61bbb3SSatish Balay 11682d61bbb3SSatish Balay { 11692d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1170dcf5cc72SBarry Smith PetscScalar *zb,*x,*z,*xb = 0,x1,x2,x3,x4,x5; 11713f1db9ecSBarry Smith MatScalar *v; 11726849ba73SBarry Smith PetscErrorCode ierr; 11737b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,rval,bs=A->bs,j,n,bs2=a->bs2,*ib,*ridx=PETSC_NULL; 11743447b6efSHong Zhang Mat_CompressedRow cprow = a->compressedrow; 11753447b6efSHong Zhang PetscTruth usecprow=cprow.use; 11762d61bbb3SSatish Balay 11772d61bbb3SSatish Balay PetscFunctionBegin; 1178ef66eb69SBarry Smith if (yy != zz) { ierr = VecCopy(yy,zz);CHKERRQ(ierr); } 11793447b6efSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 11803447b6efSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 11812d61bbb3SSatish Balay 11822d61bbb3SSatish Balay idx = a->j; 11832d61bbb3SSatish Balay v = a->a; 11843447b6efSHong Zhang if (usecprow){ 11853447b6efSHong Zhang mbs = cprow.nrows; 11863447b6efSHong Zhang ii = cprow.i; 11877b2bb3b9SHong Zhang ridx = cprow.rindex; 11883447b6efSHong Zhang } else { 11893447b6efSHong Zhang mbs=a->mbs; 11902d61bbb3SSatish Balay ii = a->i; 1191f1af5d2fSBarry Smith xb = x; 11923447b6efSHong Zhang } 11932d61bbb3SSatish Balay 11942d61bbb3SSatish Balay switch (bs) { 11952d61bbb3SSatish Balay case 1: 11962d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 11977b2bb3b9SHong Zhang if (usecprow) xb = x + ridx[i]; 1198f1af5d2fSBarry Smith x1 = xb[0]; 11993447b6efSHong Zhang ib = idx + ii[0]; 12003447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 12012d61bbb3SSatish Balay for (j=0; j<n; j++) { 12022d61bbb3SSatish Balay rval = ib[j]; 1203f1af5d2fSBarry Smith z[rval] += *v * x1; 1204f1af5d2fSBarry Smith v++; 12052d61bbb3SSatish Balay } 12063447b6efSHong Zhang if (!usecprow) xb++; 12072d61bbb3SSatish Balay } 12082d61bbb3SSatish Balay break; 12092d61bbb3SSatish Balay case 2: 12102d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 12117b2bb3b9SHong Zhang if (usecprow) xb = x + 2*ridx[i]; 1212f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; 12133447b6efSHong Zhang ib = idx + ii[0]; 12143447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 12152d61bbb3SSatish Balay for (j=0; j<n; j++) { 12162d61bbb3SSatish Balay rval = ib[j]*2; 12172d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2; 12182d61bbb3SSatish Balay z[rval++] += v[2]*x1 + v[3]*x2; 12192d61bbb3SSatish Balay v += 4; 12202d61bbb3SSatish Balay } 12213447b6efSHong Zhang if (!usecprow) xb += 2; 12222d61bbb3SSatish Balay } 12232d61bbb3SSatish Balay break; 12242d61bbb3SSatish Balay case 3: 12252d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 12267b2bb3b9SHong Zhang if (usecprow) xb = x + 3*ridx[i]; 1227f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 12283447b6efSHong Zhang ib = idx + ii[0]; 12293447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 12302d61bbb3SSatish Balay for (j=0; j<n; j++) { 12312d61bbb3SSatish Balay rval = ib[j]*3; 12322d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2 + v[2]*x3; 12332d61bbb3SSatish Balay z[rval++] += v[3]*x1 + v[4]*x2 + v[5]*x3; 12342d61bbb3SSatish Balay z[rval++] += v[6]*x1 + v[7]*x2 + v[8]*x3; 12352d61bbb3SSatish Balay v += 9; 12362d61bbb3SSatish Balay } 12373447b6efSHong Zhang if (!usecprow) xb += 3; 12382d61bbb3SSatish Balay } 12392d61bbb3SSatish Balay break; 12402d61bbb3SSatish Balay case 4: 12412d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 12427b2bb3b9SHong Zhang if (usecprow) xb = x + 4*ridx[i]; 1243f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 12443447b6efSHong Zhang ib = idx + ii[0]; 12453447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 12462d61bbb3SSatish Balay for (j=0; j<n; j++) { 12472d61bbb3SSatish Balay rval = ib[j]*4; 12482d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4; 12492d61bbb3SSatish Balay z[rval++] += v[4]*x1 + v[5]*x2 + v[6]*x3 + v[7]*x4; 12502d61bbb3SSatish Balay z[rval++] += v[8]*x1 + v[9]*x2 + v[10]*x3 + v[11]*x4; 12512d61bbb3SSatish Balay z[rval++] += v[12]*x1 + v[13]*x2 + v[14]*x3 + v[15]*x4; 12522d61bbb3SSatish Balay v += 16; 12532d61bbb3SSatish Balay } 12543447b6efSHong Zhang if (!usecprow) xb += 4; 12552d61bbb3SSatish Balay } 12562d61bbb3SSatish Balay break; 12572d61bbb3SSatish Balay case 5: 12582d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 12597b2bb3b9SHong Zhang if (usecprow) xb = x + 5*ridx[i]; 1260f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 12612d61bbb3SSatish Balay x4 = xb[3]; x5 = xb[4]; 12623447b6efSHong Zhang ib = idx + ii[0]; 12633447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 12642d61bbb3SSatish Balay for (j=0; j<n; j++) { 12652d61bbb3SSatish Balay rval = ib[j]*5; 12662d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4 + v[4]*x5; 12672d61bbb3SSatish Balay z[rval++] += v[5]*x1 + v[6]*x2 + v[7]*x3 + v[8]*x4 + v[9]*x5; 12682d61bbb3SSatish Balay z[rval++] += v[10]*x1 + v[11]*x2 + v[12]*x3 + v[13]*x4 + v[14]*x5; 12692d61bbb3SSatish Balay z[rval++] += v[15]*x1 + v[16]*x2 + v[17]*x3 + v[18]*x4 + v[19]*x5; 12702d61bbb3SSatish Balay z[rval++] += v[20]*x1 + v[21]*x2 + v[22]*x3 + v[23]*x4 + v[24]*x5; 12712d61bbb3SSatish Balay v += 25; 12722d61bbb3SSatish Balay } 12733447b6efSHong Zhang if (!usecprow) xb += 5; 12742d61bbb3SSatish Balay } 12752d61bbb3SSatish Balay break; 1276f1af5d2fSBarry Smith default: { /* block sizes larger then 5 by 5 are handled by BLAS */ 1277690b6cddSBarry Smith PetscInt ncols,k; 12783447b6efSHong Zhang PetscScalar *work,*workt,*xtmp; 12793f1db9ecSBarry Smith 12802d61bbb3SSatish Balay if (!a->mult_work) { 1281273d9f13SBarry Smith k = PetscMax(A->m,A->n); 128287828ca2SBarry Smith ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 12832d61bbb3SSatish Balay } 12842d61bbb3SSatish Balay work = a->mult_work; 12853447b6efSHong Zhang xtmp = x; 12862d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 12872d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 12882d61bbb3SSatish Balay ncols = n*bs; 128987828ca2SBarry Smith ierr = PetscMemzero(work,ncols*sizeof(PetscScalar));CHKERRQ(ierr); 12903447b6efSHong Zhang if (usecprow) { 12917b2bb3b9SHong Zhang xtmp = x + bs*ridx[i]; 12923447b6efSHong Zhang } 12933447b6efSHong Zhang Kernel_w_gets_w_plus_trans_Ar_times_v(bs,ncols,xtmp,v,work); 129471044d3cSBarry Smith /* BLASgemv_("T",&bs,&ncols,&_DOne,v,&bs,xtmp,&_One,&_DOne,work,&_One); */ 12952d61bbb3SSatish Balay v += n*bs2; 12963447b6efSHong Zhang if (!usecprow) xtmp += bs; 12972d61bbb3SSatish Balay workt = work; 12982d61bbb3SSatish Balay for (j=0; j<n; j++) { 12992d61bbb3SSatish Balay zb = z + bs*(*idx++); 13002d61bbb3SSatish Balay for (k=0; k<bs; k++) zb[k] += workt[k] ; 13012d61bbb3SSatish Balay workt += bs; 13022d61bbb3SSatish Balay } 13032d61bbb3SSatish Balay } 13042d61bbb3SSatish Balay } 13052d61bbb3SSatish Balay } 13063447b6efSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 13073447b6efSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 1308efee365bSSatish Balay ierr = PetscLogFlops(2*a->nz*a->bs2);CHKERRQ(ierr); 13092d61bbb3SSatish Balay PetscFunctionReturn(0); 13102d61bbb3SSatish Balay } 13112d61bbb3SSatish Balay 13124a2ae208SSatish Balay #undef __FUNCT__ 13134a2ae208SSatish Balay #define __FUNCT__ "MatScale_SeqBAIJ" 1314f4df32b1SMatthew Knepley PetscErrorCode MatScale_SeqBAIJ(Mat inA,PetscScalar alpha) 13152d61bbb3SSatish Balay { 13162d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)inA->data; 1317690b6cddSBarry Smith PetscInt totalnz = a->bs2*a->nz; 1318f4df32b1SMatthew Knepley PetscScalar oalpha = alpha; 1319efee365bSSatish Balay PetscErrorCode ierr; 13203eda8832SBarry Smith #if defined(PETSC_USE_MAT_SINGLE) 1321690b6cddSBarry Smith PetscInt i; 132287052302SDinesh Kaushik #else 13234ce68768SBarry Smith PetscBLASInt tnz = (PetscBLASInt) totalnz,one = 1; 13243eda8832SBarry Smith #endif 13252d61bbb3SSatish Balay 13262d61bbb3SSatish Balay PetscFunctionBegin; 13273eda8832SBarry Smith #if defined(PETSC_USE_MAT_SINGLE) 1328f4df32b1SMatthew Knepley for (i=0; i<totalnz; i++) a->a[i] *= oalpha; 13293eda8832SBarry Smith #else 1330f4df32b1SMatthew Knepley BLASscal_(&tnz,&oalpha,a->a,&one); 13313eda8832SBarry Smith #endif 1332efee365bSSatish Balay ierr = PetscLogFlops(totalnz);CHKERRQ(ierr); 13332d61bbb3SSatish Balay PetscFunctionReturn(0); 13342d61bbb3SSatish Balay } 13352d61bbb3SSatish Balay 13364a2ae208SSatish Balay #undef __FUNCT__ 13374a2ae208SSatish Balay #define __FUNCT__ "MatNorm_SeqBAIJ" 1338dfbe8321SBarry Smith PetscErrorCode MatNorm_SeqBAIJ(Mat A,NormType type,PetscReal *norm) 13392d61bbb3SSatish Balay { 13408a62d963SHong Zhang PetscErrorCode ierr; 13412d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 13423f1db9ecSBarry Smith MatScalar *v = a->a; 1343329f5518SBarry Smith PetscReal sum = 0.0; 1344521d7252SBarry Smith PetscInt i,j,k,bs=A->bs,nz=a->nz,bs2=a->bs2,k1; 13452d61bbb3SSatish Balay 13462d61bbb3SSatish Balay PetscFunctionBegin; 13472d61bbb3SSatish Balay if (type == NORM_FROBENIUS) { 13482d61bbb3SSatish Balay for (i=0; i< bs2*nz; i++) { 1349aa482453SBarry Smith #if defined(PETSC_USE_COMPLEX) 1350329f5518SBarry Smith sum += PetscRealPart(PetscConj(*v)*(*v)); v++; 13512d61bbb3SSatish Balay #else 13522d61bbb3SSatish Balay sum += (*v)*(*v); v++; 13532d61bbb3SSatish Balay #endif 13542d61bbb3SSatish Balay } 13552d61bbb3SSatish Balay *norm = sqrt(sum); 13568a62d963SHong Zhang } else if (type == NORM_1) { /* maximum column sum */ 13578a62d963SHong Zhang PetscReal *tmp; 13588a62d963SHong Zhang PetscInt *bcol = a->j; 13598a62d963SHong Zhang ierr = PetscMalloc((A->n+1)*sizeof(PetscReal),&tmp);CHKERRQ(ierr); 13608a62d963SHong Zhang ierr = PetscMemzero(tmp,A->n*sizeof(PetscReal));CHKERRQ(ierr); 13618a62d963SHong Zhang for (i=0; i<nz; i++){ 13628a62d963SHong Zhang for (j=0; j<bs; j++){ 13638a62d963SHong Zhang k1 = bs*(*bcol) + j; /* column index */ 13648a62d963SHong Zhang for (k=0; k<bs; k++){ 13658a62d963SHong Zhang tmp[k1] += PetscAbsScalar(*v); v++; 13668a62d963SHong Zhang } 13678a62d963SHong Zhang } 13688a62d963SHong Zhang bcol++; 13698a62d963SHong Zhang } 13708a62d963SHong Zhang *norm = 0.0; 13718a62d963SHong Zhang for (j=0; j<A->n; j++) { 13728a62d963SHong Zhang if (tmp[j] > *norm) *norm = tmp[j]; 13738a62d963SHong Zhang } 13748a62d963SHong Zhang ierr = PetscFree(tmp);CHKERRQ(ierr); 1375596552b5SBarry Smith } else if (type == NORM_INFINITY) { /* maximum row sum */ 1376596552b5SBarry Smith *norm = 0.0; 1377596552b5SBarry Smith for (k=0; k<bs; k++) { 137874f84c7bSSatish Balay for (j=0; j<a->mbs; j++) { 1379596552b5SBarry Smith v = a->a + bs2*a->i[j] + k; 1380596552b5SBarry Smith sum = 0.0; 1381596552b5SBarry Smith for (i=0; i<a->i[j+1]-a->i[j]; i++) { 13820e90e235SBarry Smith for (k1=0; k1<bs; k1++){ 1383596552b5SBarry Smith sum += PetscAbsScalar(*v); 1384596552b5SBarry Smith v += bs; 13852d61bbb3SSatish Balay } 13860e90e235SBarry Smith } 1387596552b5SBarry Smith if (sum > *norm) *norm = sum; 1388596552b5SBarry Smith } 1389596552b5SBarry Smith } 1390596552b5SBarry Smith } else { 139129bbc08cSBarry Smith SETERRQ(PETSC_ERR_SUP,"No support for this norm yet"); 13922d61bbb3SSatish Balay } 13932d61bbb3SSatish Balay PetscFunctionReturn(0); 13942d61bbb3SSatish Balay } 13952d61bbb3SSatish Balay 13962d61bbb3SSatish Balay 13974a2ae208SSatish Balay #undef __FUNCT__ 13984a2ae208SSatish Balay #define __FUNCT__ "MatEqual_SeqBAIJ" 1399dfbe8321SBarry Smith PetscErrorCode MatEqual_SeqBAIJ(Mat A,Mat B,PetscTruth* flg) 14002d61bbb3SSatish Balay { 14012d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ *)A->data,*b = (Mat_SeqBAIJ *)B->data; 1402dfbe8321SBarry Smith PetscErrorCode ierr; 14032d61bbb3SSatish Balay 14042d61bbb3SSatish Balay PetscFunctionBegin; 14052d61bbb3SSatish Balay /* If the matrix/block dimensions are not equal, or no of nonzeros or shift */ 1406521d7252SBarry Smith if ((A->m != B->m) || (A->n != B->n) || (A->bs != B->bs)|| (a->nz != b->nz)) { 1407273d9f13SBarry Smith *flg = PETSC_FALSE; 1408273d9f13SBarry Smith PetscFunctionReturn(0); 14092d61bbb3SSatish Balay } 14102d61bbb3SSatish Balay 14112d61bbb3SSatish Balay /* if the a->i are the same */ 1412690b6cddSBarry Smith ierr = PetscMemcmp(a->i,b->i,(a->mbs+1)*sizeof(PetscInt),flg);CHKERRQ(ierr); 1413abc0a331SBarry Smith if (!*flg) { 14140f5bd95cSBarry Smith PetscFunctionReturn(0); 14152d61bbb3SSatish Balay } 14162d61bbb3SSatish Balay 14172d61bbb3SSatish Balay /* if a->j are the same */ 1418690b6cddSBarry Smith ierr = PetscMemcmp(a->j,b->j,(a->nz)*sizeof(PetscInt),flg);CHKERRQ(ierr); 1419abc0a331SBarry Smith if (!*flg) { 14200f5bd95cSBarry Smith PetscFunctionReturn(0); 14212d61bbb3SSatish Balay } 14222d61bbb3SSatish Balay /* if a->a are the same */ 1423521d7252SBarry Smith ierr = PetscMemcmp(a->a,b->a,(a->nz)*(A->bs)*(B->bs)*sizeof(PetscScalar),flg);CHKERRQ(ierr); 14242d61bbb3SSatish Balay PetscFunctionReturn(0); 14252d61bbb3SSatish Balay 14262d61bbb3SSatish Balay } 14272d61bbb3SSatish Balay 14284a2ae208SSatish Balay #undef __FUNCT__ 14294a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonal_SeqBAIJ" 1430dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_SeqBAIJ(Mat A,Vec v) 14312d61bbb3SSatish Balay { 14322d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1433dfbe8321SBarry Smith PetscErrorCode ierr; 1434690b6cddSBarry Smith PetscInt i,j,k,n,row,bs,*ai,*aj,ambs,bs2; 143587828ca2SBarry Smith PetscScalar *x,zero = 0.0; 14363f1db9ecSBarry Smith MatScalar *aa,*aa_j; 14372d61bbb3SSatish Balay 14382d61bbb3SSatish Balay PetscFunctionBegin; 143929bbc08cSBarry Smith if (A->factor) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Not for factored matrix"); 1440521d7252SBarry Smith bs = A->bs; 14412d61bbb3SSatish Balay aa = a->a; 14422d61bbb3SSatish Balay ai = a->i; 14432d61bbb3SSatish Balay aj = a->j; 14442d61bbb3SSatish Balay ambs = a->mbs; 14452d61bbb3SSatish Balay bs2 = a->bs2; 14462d61bbb3SSatish Balay 14472dcb1b2aSMatthew Knepley ierr = VecSet(v,zero);CHKERRQ(ierr); 14481ebc52fbSHong Zhang ierr = VecGetArray(v,&x);CHKERRQ(ierr); 1449e1311b90SBarry Smith ierr = VecGetLocalSize(v,&n);CHKERRQ(ierr); 1450273d9f13SBarry Smith if (n != A->m) SETERRQ(PETSC_ERR_ARG_SIZ,"Nonconforming matrix and vector"); 14512d61bbb3SSatish Balay for (i=0; i<ambs; i++) { 14522d61bbb3SSatish Balay for (j=ai[i]; j<ai[i+1]; j++) { 14532d61bbb3SSatish Balay if (aj[j] == i) { 14542d61bbb3SSatish Balay row = i*bs; 14552d61bbb3SSatish Balay aa_j = aa+j*bs2; 14562d61bbb3SSatish Balay for (k=0; k<bs2; k+=(bs+1),row++) x[row] = aa_j[k]; 14572d61bbb3SSatish Balay break; 14582d61bbb3SSatish Balay } 14592d61bbb3SSatish Balay } 14602d61bbb3SSatish Balay } 14611ebc52fbSHong Zhang ierr = VecRestoreArray(v,&x);CHKERRQ(ierr); 14622d61bbb3SSatish Balay PetscFunctionReturn(0); 14632d61bbb3SSatish Balay } 14642d61bbb3SSatish Balay 14654a2ae208SSatish Balay #undef __FUNCT__ 14664a2ae208SSatish Balay #define __FUNCT__ "MatDiagonalScale_SeqBAIJ" 1467dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_SeqBAIJ(Mat A,Vec ll,Vec rr) 14682d61bbb3SSatish Balay { 14692d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 147087828ca2SBarry Smith PetscScalar *l,*r,x,*li,*ri; 14713f1db9ecSBarry Smith MatScalar *aa,*v; 1472dfbe8321SBarry Smith PetscErrorCode ierr; 1473690b6cddSBarry Smith PetscInt i,j,k,lm,rn,M,m,n,*ai,*aj,mbs,tmp,bs,bs2; 14742d61bbb3SSatish Balay 14752d61bbb3SSatish Balay PetscFunctionBegin; 14762d61bbb3SSatish Balay ai = a->i; 14772d61bbb3SSatish Balay aj = a->j; 14782d61bbb3SSatish Balay aa = a->a; 1479273d9f13SBarry Smith m = A->m; 1480273d9f13SBarry Smith n = A->n; 1481521d7252SBarry Smith bs = A->bs; 14822d61bbb3SSatish Balay mbs = a->mbs; 14832d61bbb3SSatish Balay bs2 = a->bs2; 14842d61bbb3SSatish Balay if (ll) { 14851ebc52fbSHong Zhang ierr = VecGetArray(ll,&l);CHKERRQ(ierr); 1486e1311b90SBarry Smith ierr = VecGetLocalSize(ll,&lm);CHKERRQ(ierr); 148729bbc08cSBarry Smith if (lm != m) SETERRQ(PETSC_ERR_ARG_SIZ,"Left scaling vector wrong length"); 14882d61bbb3SSatish Balay for (i=0; i<mbs; i++) { /* for each block row */ 14892d61bbb3SSatish Balay M = ai[i+1] - ai[i]; 14902d61bbb3SSatish Balay li = l + i*bs; 14912d61bbb3SSatish Balay v = aa + bs2*ai[i]; 14922d61bbb3SSatish Balay for (j=0; j<M; j++) { /* for each block */ 14932d61bbb3SSatish Balay for (k=0; k<bs2; k++) { 14942d61bbb3SSatish Balay (*v++) *= li[k%bs]; 14952d61bbb3SSatish Balay } 14962d61bbb3SSatish Balay } 14972d61bbb3SSatish Balay } 14981ebc52fbSHong Zhang ierr = VecRestoreArray(ll,&l);CHKERRQ(ierr); 1499efee365bSSatish Balay ierr = PetscLogFlops(a->nz);CHKERRQ(ierr); 15002d61bbb3SSatish Balay } 15012d61bbb3SSatish Balay 15022d61bbb3SSatish Balay if (rr) { 15031ebc52fbSHong Zhang ierr = VecGetArray(rr,&r);CHKERRQ(ierr); 1504e1311b90SBarry Smith ierr = VecGetLocalSize(rr,&rn);CHKERRQ(ierr); 150529bbc08cSBarry Smith if (rn != n) SETERRQ(PETSC_ERR_ARG_SIZ,"Right scaling vector wrong length"); 15062d61bbb3SSatish Balay for (i=0; i<mbs; i++) { /* for each block row */ 15072d61bbb3SSatish Balay M = ai[i+1] - ai[i]; 15082d61bbb3SSatish Balay v = aa + bs2*ai[i]; 15092d61bbb3SSatish Balay for (j=0; j<M; j++) { /* for each block */ 15102d61bbb3SSatish Balay ri = r + bs*aj[ai[i]+j]; 15112d61bbb3SSatish Balay for (k=0; k<bs; k++) { 15122d61bbb3SSatish Balay x = ri[k]; 15132d61bbb3SSatish Balay for (tmp=0; tmp<bs; tmp++) (*v++) *= x; 15142d61bbb3SSatish Balay } 15152d61bbb3SSatish Balay } 15162d61bbb3SSatish Balay } 15171ebc52fbSHong Zhang ierr = VecRestoreArray(rr,&r);CHKERRQ(ierr); 1518efee365bSSatish Balay ierr = PetscLogFlops(a->nz);CHKERRQ(ierr); 15192d61bbb3SSatish Balay } 15202d61bbb3SSatish Balay PetscFunctionReturn(0); 15212d61bbb3SSatish Balay } 15222d61bbb3SSatish Balay 15232d61bbb3SSatish Balay 15244a2ae208SSatish Balay #undef __FUNCT__ 15254a2ae208SSatish Balay #define __FUNCT__ "MatGetInfo_SeqBAIJ" 1526dfbe8321SBarry Smith PetscErrorCode MatGetInfo_SeqBAIJ(Mat A,MatInfoType flag,MatInfo *info) 15272d61bbb3SSatish Balay { 15282d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 15292d61bbb3SSatish Balay 15302d61bbb3SSatish Balay PetscFunctionBegin; 1531273d9f13SBarry Smith info->rows_global = (double)A->m; 1532273d9f13SBarry Smith info->columns_global = (double)A->n; 1533273d9f13SBarry Smith info->rows_local = (double)A->m; 1534273d9f13SBarry Smith info->columns_local = (double)A->n; 15352d61bbb3SSatish Balay info->block_size = a->bs2; 15362d61bbb3SSatish Balay info->nz_allocated = a->maxnz; 15372d61bbb3SSatish Balay info->nz_used = a->bs2*a->nz; 15382d61bbb3SSatish Balay info->nz_unneeded = (double)(info->nz_allocated - info->nz_used); 15392d61bbb3SSatish Balay info->assemblies = A->num_ass; 15402d61bbb3SSatish Balay info->mallocs = a->reallocs; 15412d61bbb3SSatish Balay info->memory = A->mem; 15422d61bbb3SSatish Balay if (A->factor) { 15432d61bbb3SSatish Balay info->fill_ratio_given = A->info.fill_ratio_given; 15442d61bbb3SSatish Balay info->fill_ratio_needed = A->info.fill_ratio_needed; 15452d61bbb3SSatish Balay info->factor_mallocs = A->info.factor_mallocs; 15462d61bbb3SSatish Balay } else { 15472d61bbb3SSatish Balay info->fill_ratio_given = 0; 15482d61bbb3SSatish Balay info->fill_ratio_needed = 0; 15492d61bbb3SSatish Balay info->factor_mallocs = 0; 15502d61bbb3SSatish Balay } 15512d61bbb3SSatish Balay PetscFunctionReturn(0); 15522d61bbb3SSatish Balay } 15532d61bbb3SSatish Balay 15542d61bbb3SSatish Balay 15554a2ae208SSatish Balay #undef __FUNCT__ 15564a2ae208SSatish Balay #define __FUNCT__ "MatZeroEntries_SeqBAIJ" 1557dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_SeqBAIJ(Mat A) 15582d61bbb3SSatish Balay { 15592d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1560dfbe8321SBarry Smith PetscErrorCode ierr; 15612d61bbb3SSatish Balay 15622d61bbb3SSatish Balay PetscFunctionBegin; 1563549d3d68SSatish Balay ierr = PetscMemzero(a->a,a->bs2*a->i[a->mbs]*sizeof(MatScalar));CHKERRQ(ierr); 15642d61bbb3SSatish Balay PetscFunctionReturn(0); 15652d61bbb3SSatish Balay } 1566