1*be1d678aSKris Buschelman #define PETSCMAT_DLL 2cac129eeSSatish Balay 370f55243SBarry Smith #include "src/mat/impls/baij/seq/baij.h" 42d61bbb3SSatish Balay #include "src/inline/spops.h" 53f1db9ecSBarry Smith #include "src/inline/ilu.h" 60a835dfdSSatish Balay #include "petscbt.h" 7cac129eeSSatish Balay 84a2ae208SSatish Balay #undef __FUNCT__ 94a2ae208SSatish Balay #define __FUNCT__ "MatIncreaseOverlap_SeqBAIJ" 10690b6cddSBarry Smith PetscErrorCode MatIncreaseOverlap_SeqBAIJ(Mat A,PetscInt is_max,IS is[],PetscInt ov) 11a3192f15SSatish Balay { 12a3192f15SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 136849ba73SBarry Smith PetscErrorCode ierr; 14690b6cddSBarry Smith PetscInt row,i,j,k,l,m,n,*idx,*nidx,isz,val,ival; 15690b6cddSBarry Smith PetscInt start,end,*ai,*aj,bs,*nidx2; 16f1af5d2fSBarry Smith PetscBT table; 17a3192f15SSatish Balay 183a40ed3dSBarry Smith PetscFunctionBegin; 19a3192f15SSatish Balay m = a->mbs; 20a3192f15SSatish Balay ai = a->i; 21a3192f15SSatish Balay aj = a->j; 22521d7252SBarry Smith bs = A->bs; 23a3192f15SSatish Balay 2429bbc08cSBarry Smith if (ov < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative overlap specified"); 25a3192f15SSatish Balay 266831982aSBarry Smith ierr = PetscBTCreate(m,table);CHKERRQ(ierr); 27690b6cddSBarry Smith ierr = PetscMalloc((m+1)*sizeof(PetscInt),&nidx);CHKERRQ(ierr); 28690b6cddSBarry Smith ierr = PetscMalloc((A->m+1)*sizeof(PetscInt),&nidx2);CHKERRQ(ierr); 29a3192f15SSatish Balay 30a3192f15SSatish Balay for (i=0; i<is_max; i++) { 31a3192f15SSatish Balay /* Initialise the two local arrays */ 32a3192f15SSatish Balay isz = 0; 336831982aSBarry Smith ierr = PetscBTMemzero(m,table);CHKERRQ(ierr); 34a3192f15SSatish Balay 35a3192f15SSatish Balay /* Extract the indices, assume there can be duplicate entries */ 36a3192f15SSatish Balay ierr = ISGetIndices(is[i],&idx);CHKERRQ(ierr); 37b9b97703SBarry Smith ierr = ISGetLocalSize(is[i],&n);CHKERRQ(ierr); 38a3192f15SSatish Balay 39a3192f15SSatish Balay /* Enter these into the temp arrays i.e mark table[row], enter row into new index */ 40a3192f15SSatish Balay for (j=0; j<n ; ++j){ 41218c64b6SSatish Balay ival = idx[j]/bs; /* convert the indices into block indices */ 425eee224dSHong Zhang if (ival>=m) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"index greater than mat-dim"); 43f1af5d2fSBarry Smith if(!PetscBTLookupSet(table,ival)) { nidx[isz++] = ival;} 44a3192f15SSatish Balay } 45a3192f15SSatish Balay ierr = ISRestoreIndices(is[i],&idx);CHKERRQ(ierr); 46a3192f15SSatish Balay ierr = ISDestroy(is[i]);CHKERRQ(ierr); 47a3192f15SSatish Balay 48a3192f15SSatish Balay k = 0; 49a3192f15SSatish Balay for (j=0; j<ov; j++){ /* for each overlap*/ 50a3192f15SSatish Balay n = isz; 51a3192f15SSatish Balay for (; k<n ; k++){ /* do only those rows in nidx[k], which are not done yet */ 52a3192f15SSatish Balay row = nidx[k]; 53a3192f15SSatish Balay start = ai[row]; 54a3192f15SSatish Balay end = ai[row+1]; 55a3192f15SSatish Balay for (l = start; l<end ; l++){ 56a3192f15SSatish Balay val = aj[l]; 57f1af5d2fSBarry Smith if (!PetscBTLookupSet(table,val)) {nidx[isz++] = val;} 58a3192f15SSatish Balay } 59a3192f15SSatish Balay } 60a3192f15SSatish Balay } 61218c64b6SSatish Balay /* expand the Index Set */ 62218c64b6SSatish Balay for (j=0; j<isz; j++) { 63218c64b6SSatish Balay for (k=0; k<bs; k++) 64218c64b6SSatish Balay nidx2[j*bs+k] = nidx[j]*bs+k; 65218c64b6SSatish Balay } 66329f5518SBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,isz*bs,nidx2,is+i);CHKERRQ(ierr); 67a3192f15SSatish Balay } 686831982aSBarry Smith ierr = PetscBTDestroy(table);CHKERRQ(ierr); 69606d414cSSatish Balay ierr = PetscFree(nidx);CHKERRQ(ierr); 70606d414cSSatish Balay ierr = PetscFree(nidx2);CHKERRQ(ierr); 713a40ed3dSBarry Smith PetscFunctionReturn(0); 72a3192f15SSatish Balay } 731c351548SSatish Balay 744a2ae208SSatish Balay #undef __FUNCT__ 754a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrix_SeqBAIJ_Private" 76690b6cddSBarry Smith PetscErrorCode MatGetSubMatrix_SeqBAIJ_Private(Mat A,IS isrow,IS iscol,PetscInt cs,MatReuse scall,Mat *B) 77736121d4SSatish Balay { 78736121d4SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*c; 796849ba73SBarry Smith PetscErrorCode ierr; 80690b6cddSBarry Smith PetscInt *smap,i,k,kstart,kend,oldcols = a->nbs,*lens; 81690b6cddSBarry Smith PetscInt row,mat_i,*mat_j,tcol,*mat_ilen; 82521d7252SBarry Smith PetscInt *irow,*icol,nrows,ncols,*ssmap,bs=A->bs,bs2=a->bs2; 83690b6cddSBarry Smith PetscInt *aj = a->j,*ai = a->i; 843f1db9ecSBarry Smith MatScalar *mat_a; 85736121d4SSatish Balay Mat C; 860f5bd95cSBarry Smith PetscTruth flag; 87736121d4SSatish Balay 883a40ed3dSBarry Smith PetscFunctionBegin; 89888f2ed8SSatish Balay ierr = ISSorted(iscol,(PetscTruth*)&i);CHKERRQ(ierr); 9029bbc08cSBarry Smith if (!i) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"IS is not sorted"); 91736121d4SSatish Balay 92736121d4SSatish Balay ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr); 93218c64b6SSatish Balay ierr = ISGetIndices(iscol,&icol);CHKERRQ(ierr); 94b9b97703SBarry Smith ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr); 95b9b97703SBarry Smith ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr); 96736121d4SSatish Balay 97690b6cddSBarry Smith ierr = PetscMalloc((1+oldcols)*sizeof(PetscInt),&smap);CHKERRQ(ierr); 98736121d4SSatish Balay ssmap = smap; 99690b6cddSBarry Smith ierr = PetscMalloc((1+nrows)*sizeof(PetscInt),&lens);CHKERRQ(ierr); 100690b6cddSBarry Smith ierr = PetscMemzero(smap,oldcols*sizeof(PetscInt));CHKERRQ(ierr); 101736121d4SSatish Balay for (i=0; i<ncols; i++) smap[icol[i]] = i+1; 102736121d4SSatish Balay /* determine lens of each row */ 103736121d4SSatish Balay for (i=0; i<nrows; i++) { 104736121d4SSatish Balay kstart = ai[irow[i]]; 105736121d4SSatish Balay kend = kstart + a->ilen[irow[i]]; 106736121d4SSatish Balay lens[i] = 0; 107736121d4SSatish Balay for (k=kstart; k<kend; k++) { 108736121d4SSatish Balay if (ssmap[aj[k]]) { 109736121d4SSatish Balay lens[i]++; 110736121d4SSatish Balay } 111736121d4SSatish Balay } 112736121d4SSatish Balay } 113736121d4SSatish Balay /* Create and fill new matrix */ 114736121d4SSatish Balay if (scall == MAT_REUSE_MATRIX) { 115736121d4SSatish Balay c = (Mat_SeqBAIJ *)((*B)->data); 116736121d4SSatish Balay 117521d7252SBarry Smith if (c->mbs!=nrows || c->nbs!=ncols || (*B)->bs!=bs) SETERRQ(PETSC_ERR_ARG_SIZ,"Submatrix wrong size"); 118690b6cddSBarry Smith ierr = PetscMemcmp(c->ilen,lens,c->mbs *sizeof(PetscInt),&flag);CHKERRQ(ierr); 119abc0a331SBarry Smith if (!flag) { 12029bbc08cSBarry Smith SETERRQ(PETSC_ERR_ARG_SIZ,"Cannot reuse matrix. wrong no of nonzeros"); 121736121d4SSatish Balay } 122690b6cddSBarry Smith ierr = PetscMemzero(c->ilen,c->mbs*sizeof(PetscInt));CHKERRQ(ierr); 123736121d4SSatish Balay C = *B; 1243a40ed3dSBarry Smith } else { 125e2d9671bSKris Buschelman ierr = MatCreate(A->comm,nrows*bs,ncols*bs,PETSC_DETERMINE,PETSC_DETERMINE,&C);CHKERRQ(ierr); 126e2d9671bSKris Buschelman ierr = MatSetType(C,A->type_name);CHKERRQ(ierr); 127e2d9671bSKris Buschelman ierr = MatSeqBAIJSetPreallocation(C,bs,0,lens);CHKERRQ(ierr); 128736121d4SSatish Balay } 129736121d4SSatish Balay c = (Mat_SeqBAIJ *)(C->data); 130736121d4SSatish Balay for (i=0; i<nrows; i++) { 131736121d4SSatish Balay row = irow[i]; 132736121d4SSatish Balay kstart = ai[row]; 133736121d4SSatish Balay kend = kstart + a->ilen[row]; 134736121d4SSatish Balay mat_i = c->i[i]; 135736121d4SSatish Balay mat_j = c->j + mat_i; 136218c64b6SSatish Balay mat_a = c->a + mat_i*bs2; 137736121d4SSatish Balay mat_ilen = c->ilen + i; 138736121d4SSatish Balay for (k=kstart; k<kend; k++) { 139736121d4SSatish Balay if ((tcol=ssmap[a->j[k]])) { 140736121d4SSatish Balay *mat_j++ = tcol - 1; 141549d3d68SSatish Balay ierr = PetscMemcpy(mat_a,a->a+k*bs2,bs2*sizeof(MatScalar));CHKERRQ(ierr); 142549d3d68SSatish Balay mat_a += bs2; 143736121d4SSatish Balay (*mat_ilen)++; 144736121d4SSatish Balay } 145736121d4SSatish Balay } 146736121d4SSatish Balay } 147218c64b6SSatish Balay 148736121d4SSatish Balay /* Free work space */ 149736121d4SSatish Balay ierr = ISRestoreIndices(iscol,&icol);CHKERRQ(ierr); 150606d414cSSatish Balay ierr = PetscFree(smap);CHKERRQ(ierr); 151606d414cSSatish Balay ierr = PetscFree(lens);CHKERRQ(ierr); 1526d4a8577SBarry Smith ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1536d4a8577SBarry Smith ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 154736121d4SSatish Balay 155736121d4SSatish Balay ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr); 156736121d4SSatish Balay *B = C; 1573a40ed3dSBarry Smith PetscFunctionReturn(0); 158736121d4SSatish Balay } 159736121d4SSatish Balay 1604a2ae208SSatish Balay #undef __FUNCT__ 1614a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrix_SeqBAIJ" 162690b6cddSBarry Smith PetscErrorCode MatGetSubMatrix_SeqBAIJ(Mat A,IS isrow,IS iscol,PetscInt cs,MatReuse scall,Mat *B) 163218c64b6SSatish Balay { 164218c64b6SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 165218c64b6SSatish Balay IS is1,is2; 1666849ba73SBarry Smith PetscErrorCode ierr; 167521d7252SBarry Smith PetscInt *vary,*iary,*irow,*icol,nrows,ncols,i,bs=A->bs,count; 168218c64b6SSatish Balay 1693a40ed3dSBarry Smith PetscFunctionBegin; 170218c64b6SSatish Balay ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr); 171218c64b6SSatish Balay ierr = ISGetIndices(iscol,&icol);CHKERRQ(ierr); 172b9b97703SBarry Smith ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr); 173b9b97703SBarry Smith ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr); 174218c64b6SSatish Balay 175218c64b6SSatish Balay /* Verify if the indices corespond to each element in a block 176218c64b6SSatish Balay and form the IS with compressed IS */ 177690b6cddSBarry Smith ierr = PetscMalloc(2*(a->mbs+1)*sizeof(PetscInt),&vary);CHKERRQ(ierr); 178218c64b6SSatish Balay iary = vary + a->mbs; 179690b6cddSBarry Smith ierr = PetscMemzero(vary,(a->mbs)*sizeof(PetscInt));CHKERRQ(ierr); 180218c64b6SSatish Balay for (i=0; i<nrows; i++) vary[irow[i]/bs]++; 181218c64b6SSatish Balay count = 0; 182218c64b6SSatish Balay for (i=0; i<a->mbs; i++) { 183634064b4SBarry Smith if (vary[i]!=0 && vary[i]!=bs) SETERRQ(PETSC_ERR_ARG_SIZ,"Index set does not match blocks"); 184218c64b6SSatish Balay if (vary[i]==bs) iary[count++] = i; 185218c64b6SSatish Balay } 186029af93fSBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,count,iary,&is1);CHKERRQ(ierr); 187218c64b6SSatish Balay 188690b6cddSBarry Smith ierr = PetscMemzero(vary,(a->mbs)*sizeof(PetscInt));CHKERRQ(ierr); 189218c64b6SSatish Balay for (i=0; i<ncols; i++) vary[icol[i]/bs]++; 190218c64b6SSatish Balay count = 0; 191218c64b6SSatish Balay for (i=0; i<a->mbs; i++) { 192634064b4SBarry Smith if (vary[i]!=0 && vary[i]!=bs) SETERRQ(PETSC_ERR_PLIB,"Internal error in PETSc"); 193218c64b6SSatish Balay if (vary[i]==bs) iary[count++] = i; 194218c64b6SSatish Balay } 195029af93fSBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,count,iary,&is2);CHKERRQ(ierr); 196218c64b6SSatish Balay ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr); 197218c64b6SSatish Balay ierr = ISRestoreIndices(iscol,&icol);CHKERRQ(ierr); 198606d414cSSatish Balay ierr = PetscFree(vary);CHKERRQ(ierr); 199218c64b6SSatish Balay 2006a6a5d1dSBarry Smith ierr = MatGetSubMatrix_SeqBAIJ_Private(A,is1,is2,cs,scall,B);CHKERRQ(ierr); 201218c64b6SSatish Balay ISDestroy(is1); 202218c64b6SSatish Balay ISDestroy(is2); 2033a40ed3dSBarry Smith PetscFunctionReturn(0); 204218c64b6SSatish Balay } 205218c64b6SSatish Balay 2064a2ae208SSatish Balay #undef __FUNCT__ 2074a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrices_SeqBAIJ" 208690b6cddSBarry Smith PetscErrorCode MatGetSubMatrices_SeqBAIJ(Mat A,PetscInt n,const IS irow[],const IS icol[],MatReuse scall,Mat *B[]) 209736121d4SSatish Balay { 2106849ba73SBarry Smith PetscErrorCode ierr; 211690b6cddSBarry Smith PetscInt i; 212736121d4SSatish Balay 2133a40ed3dSBarry Smith PetscFunctionBegin; 214736121d4SSatish Balay if (scall == MAT_INITIAL_MATRIX) { 21582502324SSatish Balay ierr = PetscMalloc((n+1)*sizeof(Mat),B);CHKERRQ(ierr); 216736121d4SSatish Balay } 217736121d4SSatish Balay 218736121d4SSatish Balay for (i=0; i<n; i++) { 2196a6a5d1dSBarry Smith ierr = MatGetSubMatrix_SeqBAIJ(A,irow[i],icol[i],PETSC_DECIDE,scall,&(*B)[i]);CHKERRQ(ierr); 220736121d4SSatish Balay } 2213a40ed3dSBarry Smith PetscFunctionReturn(0); 222736121d4SSatish Balay } 223218c64b6SSatish Balay 224218c64b6SSatish Balay 2252d61bbb3SSatish Balay /* -------------------------------------------------------*/ 2262d61bbb3SSatish Balay /* Should check that shapes of vectors and matrices match */ 2272d61bbb3SSatish Balay /* -------------------------------------------------------*/ 228d9eff348SSatish Balay #include "petscblaslapack.h" 2292d61bbb3SSatish Balay 2304a2ae208SSatish Balay #undef __FUNCT__ 2314a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_1" 232dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_1(Mat A,Vec xx,Vec zz) 2332d61bbb3SSatish Balay { 2342d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 23587828ca2SBarry Smith PetscScalar *x,*z,sum; 2363f1db9ecSBarry Smith MatScalar *v; 2376849ba73SBarry Smith PetscErrorCode ierr; 2387b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,n,*ridx=PETSC_NULL; 23926e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 2402d61bbb3SSatish Balay 2412d61bbb3SSatish Balay PetscFunctionBegin; 2421ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 2431ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 2442d61bbb3SSatish Balay 2452d61bbb3SSatish Balay idx = a->j; 2462d61bbb3SSatish Balay v = a->a; 24726e093fcSHong Zhang if (usecprow){ 24826e093fcSHong Zhang mbs = a->compressedrow.nrows; 24926e093fcSHong Zhang ii = a->compressedrow.i; 2507b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 25126e093fcSHong Zhang } else { 25226e093fcSHong Zhang mbs = a->mbs; 2532d61bbb3SSatish Balay ii = a->i; 25426e093fcSHong Zhang } 2552d61bbb3SSatish Balay 2562d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 2572d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 2582d61bbb3SSatish Balay sum = 0.0; 2592d61bbb3SSatish Balay while (n--) sum += *v++ * x[*idx++]; 26026e093fcSHong Zhang if (usecprow){ 2617b2bb3b9SHong Zhang z[ridx[i]] = sum; 26226e093fcSHong Zhang } else { 2632d61bbb3SSatish Balay z[i] = sum; 2642d61bbb3SSatish Balay } 26526e093fcSHong Zhang } 2661ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 2671ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 268efee365bSSatish Balay ierr = PetscLogFlops(2*a->nz - mbs);CHKERRQ(ierr); 2692d61bbb3SSatish Balay PetscFunctionReturn(0); 2702d61bbb3SSatish Balay } 2712d61bbb3SSatish Balay 2724a2ae208SSatish Balay #undef __FUNCT__ 2734a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_2" 274dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_2(Mat A,Vec xx,Vec zz) 2752d61bbb3SSatish Balay { 2762d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 277dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,sum1,sum2,*zarray; 27887828ca2SBarry Smith PetscScalar x1,x2; 2793f1db9ecSBarry Smith MatScalar *v; 280dfbe8321SBarry Smith PetscErrorCode ierr; 2817b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 28226e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 2832d61bbb3SSatish Balay 2842d61bbb3SSatish Balay PetscFunctionBegin; 2851ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 28626e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 2872d61bbb3SSatish Balay 2882d61bbb3SSatish Balay idx = a->j; 2892d61bbb3SSatish Balay v = a->a; 29026e093fcSHong Zhang if (usecprow){ 29126e093fcSHong Zhang mbs = a->compressedrow.nrows; 29226e093fcSHong Zhang ii = a->compressedrow.i; 2937b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 29426e093fcSHong Zhang } else { 29526e093fcSHong Zhang mbs = a->mbs; 2962d61bbb3SSatish Balay ii = a->i; 29726e093fcSHong Zhang z = zarray; 29826e093fcSHong Zhang } 2992d61bbb3SSatish Balay 3002d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 3012d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 3022d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; 3032d61bbb3SSatish Balay for (j=0; j<n; j++) { 3042d61bbb3SSatish Balay xb = x + 2*(*idx++); x1 = xb[0]; x2 = xb[1]; 3052d61bbb3SSatish Balay sum1 += v[0]*x1 + v[2]*x2; 3062d61bbb3SSatish Balay sum2 += v[1]*x1 + v[3]*x2; 3072d61bbb3SSatish Balay v += 4; 3082d61bbb3SSatish Balay } 3097b2bb3b9SHong Zhang if (usecprow) z = zarray + 2*ridx[i]; 3102d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; 31126e093fcSHong Zhang if (!usecprow) z += 2; 3122d61bbb3SSatish Balay } 3131ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 31426e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 315efee365bSSatish Balay ierr = PetscLogFlops(8*a->nz - 2*mbs);CHKERRQ(ierr); 3162d61bbb3SSatish Balay PetscFunctionReturn(0); 3172d61bbb3SSatish Balay } 3182d61bbb3SSatish Balay 3194a2ae208SSatish Balay #undef __FUNCT__ 3204a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_3" 321dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_3(Mat A,Vec xx,Vec zz) 3222d61bbb3SSatish Balay { 3232d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 324dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,sum1,sum2,sum3,x1,x2,x3,*zarray; 3253f1db9ecSBarry Smith MatScalar *v; 326dfbe8321SBarry Smith PetscErrorCode ierr; 3277b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 32826e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 32926e093fcSHong Zhang 3302d61bbb3SSatish Balay 331b6410449SSatish Balay #if defined(PETSC_HAVE_PRAGMA_DISJOINT) 332fee21e36SBarry Smith #pragma disjoint(*v,*z,*xb) 333fee21e36SBarry Smith #endif 334fee21e36SBarry Smith 3352d61bbb3SSatish Balay PetscFunctionBegin; 3361ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 33726e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 3382d61bbb3SSatish Balay 3392d61bbb3SSatish Balay idx = a->j; 3402d61bbb3SSatish Balay v = a->a; 34126e093fcSHong Zhang if (usecprow){ 34226e093fcSHong Zhang mbs = a->compressedrow.nrows; 34326e093fcSHong Zhang ii = a->compressedrow.i; 3447b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 34526e093fcSHong Zhang } else { 34626e093fcSHong Zhang mbs = a->mbs; 3472d61bbb3SSatish Balay ii = a->i; 34826e093fcSHong Zhang z = zarray; 34926e093fcSHong Zhang } 3502d61bbb3SSatish Balay 3512d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 3522d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 3532d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; 3542d61bbb3SSatish Balay for (j=0; j<n; j++) { 3552d61bbb3SSatish Balay xb = x + 3*(*idx++); x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 3562d61bbb3SSatish Balay sum1 += v[0]*x1 + v[3]*x2 + v[6]*x3; 3572d61bbb3SSatish Balay sum2 += v[1]*x1 + v[4]*x2 + v[7]*x3; 3582d61bbb3SSatish Balay sum3 += v[2]*x1 + v[5]*x2 + v[8]*x3; 3592d61bbb3SSatish Balay v += 9; 3602d61bbb3SSatish Balay } 3617b2bb3b9SHong Zhang if (usecprow) z = zarray + 3*ridx[i]; 3622d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; 36326e093fcSHong Zhang if (!usecprow) z += 3; 3642d61bbb3SSatish Balay } 3651ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 36626e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 367efee365bSSatish Balay ierr = PetscLogFlops(18*a->nz - 3*mbs);CHKERRQ(ierr); 3682d61bbb3SSatish Balay PetscFunctionReturn(0); 3692d61bbb3SSatish Balay } 3702d61bbb3SSatish Balay 3714a2ae208SSatish Balay #undef __FUNCT__ 3724a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_4" 373dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_4(Mat A,Vec xx,Vec zz) 3742d61bbb3SSatish Balay { 3752d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 376dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,sum1,sum2,sum3,sum4,x1,x2,x3,x4,*zarray; 3773f1db9ecSBarry Smith MatScalar *v; 378dfbe8321SBarry Smith PetscErrorCode ierr; 3797b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 38026e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 3812d61bbb3SSatish Balay 3822d61bbb3SSatish Balay PetscFunctionBegin; 3831ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 38426e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 3852d61bbb3SSatish Balay 3862d61bbb3SSatish Balay idx = a->j; 3872d61bbb3SSatish Balay v = a->a; 38826e093fcSHong Zhang if (usecprow){ 38926e093fcSHong Zhang mbs = a->compressedrow.nrows; 39026e093fcSHong Zhang ii = a->compressedrow.i; 3917b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 39226e093fcSHong Zhang } else { 39326e093fcSHong Zhang mbs = a->mbs; 3942d61bbb3SSatish Balay ii = a->i; 39526e093fcSHong Zhang z = zarray; 39626e093fcSHong Zhang } 3972d61bbb3SSatish Balay 3982d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 3992d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 4002d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; 4012d61bbb3SSatish Balay for (j=0; j<n; j++) { 4022d61bbb3SSatish Balay xb = x + 4*(*idx++); 4032d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 4042d61bbb3SSatish Balay sum1 += v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 4052d61bbb3SSatish Balay sum2 += v[1]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 4062d61bbb3SSatish Balay sum3 += v[2]*x1 + v[6]*x2 + v[10]*x3 + v[14]*x4; 4072d61bbb3SSatish Balay sum4 += v[3]*x1 + v[7]*x2 + v[11]*x3 + v[15]*x4; 4082d61bbb3SSatish Balay v += 16; 4092d61bbb3SSatish Balay } 4107b2bb3b9SHong Zhang if (usecprow) z = zarray + 4*ridx[i]; 4112d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; 41226e093fcSHong Zhang if (!usecprow) z += 4; 4132d61bbb3SSatish Balay } 4141ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 41526e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 416efee365bSSatish Balay ierr = PetscLogFlops(32*a->nz - 4*mbs);CHKERRQ(ierr); 4172d61bbb3SSatish Balay PetscFunctionReturn(0); 4182d61bbb3SSatish Balay } 4192d61bbb3SSatish Balay 4204a2ae208SSatish Balay #undef __FUNCT__ 4214a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_5" 422dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_5(Mat A,Vec xx,Vec zz) 4232d61bbb3SSatish Balay { 4242d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 425dcf5cc72SBarry Smith PetscScalar sum1,sum2,sum3,sum4,sum5,x1,x2,x3,x4,x5,*xb,*z = 0,*x,*zarray; 4263f1db9ecSBarry Smith MatScalar *v; 427dfbe8321SBarry Smith PetscErrorCode ierr; 4287b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 42926e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 4302d61bbb3SSatish Balay 431433994e6SBarry Smith PetscFunctionBegin; 4321ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 43326e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 4342d61bbb3SSatish Balay 4352d61bbb3SSatish Balay idx = a->j; 4362d61bbb3SSatish Balay v = a->a; 43726e093fcSHong Zhang if (usecprow){ 43826e093fcSHong Zhang mbs = a->compressedrow.nrows; 43926e093fcSHong Zhang ii = a->compressedrow.i; 4407b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 44126e093fcSHong Zhang } else { 44226e093fcSHong Zhang mbs = a->mbs; 4432d61bbb3SSatish Balay ii = a->i; 44426e093fcSHong Zhang z = zarray; 44526e093fcSHong Zhang } 4462d61bbb3SSatish Balay 4472d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 4482d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 4492d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; sum5 = 0.0; 4502d61bbb3SSatish Balay for (j=0; j<n; j++) { 4512d61bbb3SSatish Balay xb = x + 5*(*idx++); 4522d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; 4532d61bbb3SSatish Balay sum1 += v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4 + v[20]*x5; 4542d61bbb3SSatish Balay sum2 += v[1]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4 + v[21]*x5; 4552d61bbb3SSatish Balay sum3 += v[2]*x1 + v[7]*x2 + v[12]*x3 + v[17]*x4 + v[22]*x5; 4562d61bbb3SSatish Balay sum4 += v[3]*x1 + v[8]*x2 + v[13]*x3 + v[18]*x4 + v[23]*x5; 4572d61bbb3SSatish Balay sum5 += v[4]*x1 + v[9]*x2 + v[14]*x3 + v[19]*x4 + v[24]*x5; 4582d61bbb3SSatish Balay v += 25; 4592d61bbb3SSatish Balay } 4607b2bb3b9SHong Zhang if (usecprow) z = zarray + 5*ridx[i]; 4612d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; 46226e093fcSHong Zhang if (!usecprow) z += 5; 4632d61bbb3SSatish Balay } 4641ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 46526e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 466efee365bSSatish Balay ierr = PetscLogFlops(50*a->nz - 5*mbs);CHKERRQ(ierr); 4672d61bbb3SSatish Balay PetscFunctionReturn(0); 4682d61bbb3SSatish Balay } 4692d61bbb3SSatish Balay 47015091d37SBarry Smith 4714a2ae208SSatish Balay #undef __FUNCT__ 4724a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_6" 473dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_6(Mat A,Vec xx,Vec zz) 47415091d37SBarry Smith { 47515091d37SBarry Smith Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 476dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,sum6; 47726e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,*zarray; 47815091d37SBarry Smith MatScalar *v; 479dfbe8321SBarry Smith PetscErrorCode ierr; 4807b2bb3b9SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 48126e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 48215091d37SBarry Smith 483433994e6SBarry Smith PetscFunctionBegin; 4841ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 48526e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 48615091d37SBarry Smith 48715091d37SBarry Smith idx = a->j; 48815091d37SBarry Smith v = a->a; 48926e093fcSHong Zhang if (usecprow){ 49026e093fcSHong Zhang mbs = a->compressedrow.nrows; 49126e093fcSHong Zhang ii = a->compressedrow.i; 4927b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 49326e093fcSHong Zhang } else { 49426e093fcSHong Zhang mbs = a->mbs; 49515091d37SBarry Smith ii = a->i; 49626e093fcSHong Zhang z = zarray; 49726e093fcSHong Zhang } 49815091d37SBarry Smith 49915091d37SBarry Smith for (i=0; i<mbs; i++) { 50015091d37SBarry Smith n = ii[1] - ii[0]; ii++; 50115091d37SBarry Smith sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; sum5 = 0.0; sum6 = 0.0; 50215091d37SBarry Smith for (j=0; j<n; j++) { 50315091d37SBarry Smith xb = x + 6*(*idx++); 50415091d37SBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; 50515091d37SBarry Smith sum1 += v[0]*x1 + v[6]*x2 + v[12]*x3 + v[18]*x4 + v[24]*x5 + v[30]*x6; 50615091d37SBarry Smith sum2 += v[1]*x1 + v[7]*x2 + v[13]*x3 + v[19]*x4 + v[25]*x5 + v[31]*x6; 50715091d37SBarry Smith sum3 += v[2]*x1 + v[8]*x2 + v[14]*x3 + v[20]*x4 + v[26]*x5 + v[32]*x6; 50815091d37SBarry Smith sum4 += v[3]*x1 + v[9]*x2 + v[15]*x3 + v[21]*x4 + v[27]*x5 + v[33]*x6; 50915091d37SBarry Smith sum5 += v[4]*x1 + v[10]*x2 + v[16]*x3 + v[22]*x4 + v[28]*x5 + v[34]*x6; 51015091d37SBarry Smith sum6 += v[5]*x1 + v[11]*x2 + v[17]*x3 + v[23]*x4 + v[29]*x5 + v[35]*x6; 51115091d37SBarry Smith v += 36; 51215091d37SBarry Smith } 5137b2bb3b9SHong Zhang if (usecprow) z = zarray + 6*ridx[i]; 51415091d37SBarry Smith z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; 51526e093fcSHong Zhang if (!usecprow) z += 6; 51615091d37SBarry Smith } 51715091d37SBarry Smith 5181ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 51926e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 520efee365bSSatish Balay ierr = PetscLogFlops(72*a->nz - 6*mbs);CHKERRQ(ierr); 52115091d37SBarry Smith PetscFunctionReturn(0); 52215091d37SBarry Smith } 5234a2ae208SSatish Balay #undef __FUNCT__ 5244a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_7" 525dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_7(Mat A,Vec xx,Vec zz) 5262d61bbb3SSatish Balay { 5272d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 528dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,sum6,sum7; 52926e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,x7,*zarray; 5303f1db9ecSBarry Smith MatScalar *v; 531dfbe8321SBarry Smith PetscErrorCode ierr; 5327b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 53326e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 5342d61bbb3SSatish Balay 535433994e6SBarry Smith PetscFunctionBegin; 5361ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 53726e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 5382d61bbb3SSatish Balay 5392d61bbb3SSatish Balay idx = a->j; 5402d61bbb3SSatish Balay v = a->a; 54126e093fcSHong Zhang if (usecprow){ 54226e093fcSHong Zhang mbs = a->compressedrow.nrows; 54326e093fcSHong Zhang ii = a->compressedrow.i; 5447b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 54526e093fcSHong Zhang } else { 54626e093fcSHong Zhang mbs = a->mbs; 5472d61bbb3SSatish Balay ii = a->i; 54826e093fcSHong Zhang z = zarray; 54926e093fcSHong Zhang } 5502d61bbb3SSatish Balay 5512d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 5522d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 5532d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; sum5 = 0.0; sum6 = 0.0; sum7 = 0.0; 5542d61bbb3SSatish Balay for (j=0; j<n; j++) { 5552d61bbb3SSatish Balay xb = x + 7*(*idx++); 5562d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; x7 = xb[6]; 5572d61bbb3SSatish Balay sum1 += v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4 + v[28]*x5 + v[35]*x6 + v[42]*x7; 5582d61bbb3SSatish Balay sum2 += v[1]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4 + v[29]*x5 + v[36]*x6 + v[43]*x7; 5592d61bbb3SSatish Balay sum3 += v[2]*x1 + v[9]*x2 + v[16]*x3 + v[23]*x4 + v[30]*x5 + v[37]*x6 + v[44]*x7; 5602d61bbb3SSatish Balay sum4 += v[3]*x1 + v[10]*x2 + v[17]*x3 + v[24]*x4 + v[31]*x5 + v[38]*x6 + v[45]*x7; 5612d61bbb3SSatish Balay sum5 += v[4]*x1 + v[11]*x2 + v[18]*x3 + v[25]*x4 + v[32]*x5 + v[39]*x6 + v[46]*x7; 5622d61bbb3SSatish Balay sum6 += v[5]*x1 + v[12]*x2 + v[19]*x3 + v[26]*x4 + v[33]*x5 + v[40]*x6 + v[47]*x7; 5632d61bbb3SSatish Balay sum7 += v[6]*x1 + v[13]*x2 + v[20]*x3 + v[27]*x4 + v[34]*x5 + v[41]*x6 + v[48]*x7; 5642d61bbb3SSatish Balay v += 49; 5652d61bbb3SSatish Balay } 5667b2bb3b9SHong Zhang if (usecprow) z = zarray + 7*ridx[i]; 5672d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; z[6] = sum7; 56826e093fcSHong Zhang if (!usecprow) z += 7; 5692d61bbb3SSatish Balay } 5702d61bbb3SSatish Balay 5711ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 57226e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 573efee365bSSatish Balay ierr = PetscLogFlops(98*a->nz - 7*mbs);CHKERRQ(ierr); 5742d61bbb3SSatish Balay PetscFunctionReturn(0); 5752d61bbb3SSatish Balay } 5762d61bbb3SSatish Balay 5773f1db9ecSBarry Smith /* 5783f1db9ecSBarry Smith This will not work with MatScalar == float because it calls the BLAS 5793f1db9ecSBarry Smith */ 5804a2ae208SSatish Balay #undef __FUNCT__ 5814a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_N" 582dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_N(Mat A,Vec xx,Vec zz) 5832d61bbb3SSatish Balay { 5842d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 585dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,*work,*workt,*zarray; 5863f1db9ecSBarry Smith MatScalar *v; 587dfbe8321SBarry Smith PetscErrorCode ierr; 588521d7252SBarry Smith PetscInt mbs=a->mbs,i,*idx,*ii,bs=A->bs,j,n,bs2=a->bs2; 5897b2bb3b9SHong Zhang PetscInt ncols,k,*ridx=PETSC_NULL; 59026e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 5912d61bbb3SSatish Balay 5922d61bbb3SSatish Balay PetscFunctionBegin; 5931ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 59426e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 5952d61bbb3SSatish Balay 5962d61bbb3SSatish Balay idx = a->j; 5972d61bbb3SSatish Balay v = a->a; 59826e093fcSHong Zhang if (usecprow){ 59926e093fcSHong Zhang mbs = a->compressedrow.nrows; 60026e093fcSHong Zhang ii = a->compressedrow.i; 6017b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 60226e093fcSHong Zhang } else { 60326e093fcSHong Zhang mbs = a->mbs; 6042d61bbb3SSatish Balay ii = a->i; 60526e093fcSHong Zhang z = zarray; 60626e093fcSHong Zhang } 607218c64b6SSatish Balay 6082d61bbb3SSatish Balay if (!a->mult_work) { 609273d9f13SBarry Smith k = PetscMax(A->m,A->n); 61087828ca2SBarry Smith ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 6112d61bbb3SSatish Balay } 6122d61bbb3SSatish Balay work = a->mult_work; 6132d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 6142d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 6152d61bbb3SSatish Balay ncols = n*bs; 6162d61bbb3SSatish Balay workt = work; 6172d61bbb3SSatish Balay for (j=0; j<n; j++) { 6182d61bbb3SSatish Balay xb = x + bs*(*idx++); 6192d61bbb3SSatish Balay for (k=0; k<bs; k++) workt[k] = xb[k]; 6202d61bbb3SSatish Balay workt += bs; 6212d61bbb3SSatish Balay } 6227b2bb3b9SHong Zhang if (usecprow) z = zarray + bs*ridx[i]; 623737d121aSSatish Balay Kernel_w_gets_Ar_times_v(bs,ncols,work,v,z); 62471044d3cSBarry Smith /* BLASgemv_("N",&bs,&ncols,&_DOne,v,&bs,work,&_One,&_DZero,z,&_One); */ 6252d61bbb3SSatish Balay v += n*bs2; 62626e093fcSHong Zhang if (!usecprow) z += bs; 6272d61bbb3SSatish Balay } 6281ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 62926e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 630efee365bSSatish Balay ierr = PetscLogFlops(2*a->nz*bs2 - bs*mbs);CHKERRQ(ierr); 6312d61bbb3SSatish Balay PetscFunctionReturn(0); 6322d61bbb3SSatish Balay } 6332d61bbb3SSatish Balay 6344a2ae208SSatish Balay #undef __FUNCT__ 6354a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_1" 636dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_1(Mat A,Vec xx,Vec yy,Vec zz) 6372d61bbb3SSatish Balay { 6382d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 639dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,sum,*yarray,*zarray; 6403f1db9ecSBarry Smith MatScalar *v; 641dfbe8321SBarry Smith PetscErrorCode ierr; 6424eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,n,*ridx=PETSC_NULL; 64326e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 6442d61bbb3SSatish Balay 6452d61bbb3SSatish Balay PetscFunctionBegin; 6461ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 64726e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 6482e8a6d31SBarry Smith if (zz != yy) { 64926e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 6502e8a6d31SBarry Smith } else { 65126e093fcSHong Zhang zarray = yarray; 6522e8a6d31SBarry Smith } 6532d61bbb3SSatish Balay 6542d61bbb3SSatish Balay idx = a->j; 6552d61bbb3SSatish Balay v = a->a; 65626e093fcSHong Zhang if (usecprow){ 6574eb6d288SHong Zhang if (zz != yy){ 6584eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,mbs*sizeof(PetscScalar));CHKERRQ(ierr); 6594eb6d288SHong Zhang } 66026e093fcSHong Zhang mbs = a->compressedrow.nrows; 66126e093fcSHong Zhang ii = a->compressedrow.i; 6627b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 66326e093fcSHong Zhang } else { 6642d61bbb3SSatish Balay ii = a->i; 66526e093fcSHong Zhang y = yarray; 66626e093fcSHong Zhang z = zarray; 66726e093fcSHong Zhang } 6682d61bbb3SSatish Balay 6692d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 6702d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 67126e093fcSHong Zhang if (usecprow){ 6727b2bb3b9SHong Zhang z = zarray + ridx[i]; 6737b2bb3b9SHong Zhang y = yarray + ridx[i]; 67426e093fcSHong Zhang } 67526e093fcSHong Zhang sum = y[0]; 6762d61bbb3SSatish Balay while (n--) sum += *v++ * x[*idx++]; 67726e093fcSHong Zhang z[0] = sum; 67826e093fcSHong Zhang if (!usecprow){ 67926e093fcSHong Zhang z++; y++; 68026e093fcSHong Zhang } 6812d61bbb3SSatish Balay } 6821ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 68326e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 6842e8a6d31SBarry Smith if (zz != yy) { 68526e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 6862e8a6d31SBarry Smith } 687efee365bSSatish Balay ierr = PetscLogFlops(2*a->nz);CHKERRQ(ierr); 6882d61bbb3SSatish Balay PetscFunctionReturn(0); 6892d61bbb3SSatish Balay } 6902d61bbb3SSatish Balay 6914a2ae208SSatish Balay #undef __FUNCT__ 6924a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_2" 693dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 6942d61bbb3SSatish Balay { 6952d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 696dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2; 69726e093fcSHong Zhang PetscScalar x1,x2,*yarray,*zarray; 6983f1db9ecSBarry Smith MatScalar *v; 699dfbe8321SBarry Smith PetscErrorCode ierr; 7004eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 70126e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 7022d61bbb3SSatish Balay 7032d61bbb3SSatish Balay PetscFunctionBegin; 7041ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 70526e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 7062e8a6d31SBarry Smith if (zz != yy) { 70726e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 7082e8a6d31SBarry Smith } else { 70926e093fcSHong Zhang zarray = yarray; 7102e8a6d31SBarry Smith } 7112d61bbb3SSatish Balay 7122d61bbb3SSatish Balay idx = a->j; 7132d61bbb3SSatish Balay v = a->a; 71426e093fcSHong Zhang if (usecprow){ 7154eb6d288SHong Zhang if (zz != yy){ 7164eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,2*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 7174eb6d288SHong Zhang } 71826e093fcSHong Zhang mbs = a->compressedrow.nrows; 71926e093fcSHong Zhang ii = a->compressedrow.i; 7207b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 7214eb6d288SHong Zhang if (zz != yy){ 7224eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,a->mbs*sizeof(PetscScalar));CHKERRQ(ierr); 7234eb6d288SHong Zhang } 72426e093fcSHong Zhang } else { 7252d61bbb3SSatish Balay ii = a->i; 72626e093fcSHong Zhang y = yarray; 72726e093fcSHong Zhang z = zarray; 72826e093fcSHong Zhang } 7292d61bbb3SSatish Balay 7302d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 7312d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 73226e093fcSHong Zhang if (usecprow){ 7337b2bb3b9SHong Zhang z = zarray + 2*ridx[i]; 7347b2bb3b9SHong Zhang y = yarray + 2*ridx[i]; 73526e093fcSHong Zhang } 7362d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; 7372d61bbb3SSatish Balay for (j=0; j<n; j++) { 7382d61bbb3SSatish Balay xb = x + 2*(*idx++); x1 = xb[0]; x2 = xb[1]; 7392d61bbb3SSatish Balay sum1 += v[0]*x1 + v[2]*x2; 7402d61bbb3SSatish Balay sum2 += v[1]*x1 + v[3]*x2; 7412d61bbb3SSatish Balay v += 4; 7422d61bbb3SSatish Balay } 7432d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; 74426e093fcSHong Zhang if (!usecprow){ 7452d61bbb3SSatish Balay z += 2; y += 2; 7462d61bbb3SSatish Balay } 74726e093fcSHong Zhang } 7481ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 74926e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 7502e8a6d31SBarry Smith if (zz != yy) { 75126e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 7522e8a6d31SBarry Smith } 753efee365bSSatish Balay ierr = PetscLogFlops(4*a->nz);CHKERRQ(ierr); 7542d61bbb3SSatish Balay PetscFunctionReturn(0); 7552d61bbb3SSatish Balay } 7562d61bbb3SSatish Balay 7574a2ae208SSatish Balay #undef __FUNCT__ 7584a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_3" 759dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 7602d61bbb3SSatish Balay { 7612d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 762dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,x1,x2,x3,*yarray,*zarray; 7633f1db9ecSBarry Smith MatScalar *v; 764dfbe8321SBarry Smith PetscErrorCode ierr; 7654eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 76626e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 7672d61bbb3SSatish Balay 7682d61bbb3SSatish Balay PetscFunctionBegin; 7691ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 77026e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 7712e8a6d31SBarry Smith if (zz != yy) { 77226e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 7732e8a6d31SBarry Smith } else { 77426e093fcSHong Zhang zarray = yarray; 7752e8a6d31SBarry Smith } 7762d61bbb3SSatish Balay 7772d61bbb3SSatish Balay idx = a->j; 7782d61bbb3SSatish Balay v = a->a; 77926e093fcSHong Zhang if (usecprow){ 7804eb6d288SHong Zhang if (zz != yy){ 7814eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,3*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 7824eb6d288SHong Zhang } 78326e093fcSHong Zhang mbs = a->compressedrow.nrows; 78426e093fcSHong Zhang ii = a->compressedrow.i; 7857b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 78626e093fcSHong Zhang } else { 7872d61bbb3SSatish Balay ii = a->i; 78826e093fcSHong Zhang y = yarray; 78926e093fcSHong Zhang z = zarray; 79026e093fcSHong Zhang } 7912d61bbb3SSatish Balay 7922d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 7932d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 79426e093fcSHong Zhang if (usecprow){ 7957b2bb3b9SHong Zhang z = zarray + 3*ridx[i]; 7967b2bb3b9SHong Zhang y = yarray + 3*ridx[i]; 79726e093fcSHong Zhang } 7982d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; 7992d61bbb3SSatish Balay for (j=0; j<n; j++) { 8002d61bbb3SSatish Balay xb = x + 3*(*idx++); x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 8012d61bbb3SSatish Balay sum1 += v[0]*x1 + v[3]*x2 + v[6]*x3; 8022d61bbb3SSatish Balay sum2 += v[1]*x1 + v[4]*x2 + v[7]*x3; 8032d61bbb3SSatish Balay sum3 += v[2]*x1 + v[5]*x2 + v[8]*x3; 8042d61bbb3SSatish Balay v += 9; 8052d61bbb3SSatish Balay } 8062d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; 80726e093fcSHong Zhang if (!usecprow){ 8082d61bbb3SSatish Balay z += 3; y += 3; 8092d61bbb3SSatish Balay } 81026e093fcSHong Zhang } 8111ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 81226e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 8132e8a6d31SBarry Smith if (zz != yy) { 81426e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 8152e8a6d31SBarry Smith } 816efee365bSSatish Balay ierr = PetscLogFlops(18*a->nz);CHKERRQ(ierr); 8172d61bbb3SSatish Balay PetscFunctionReturn(0); 8182d61bbb3SSatish Balay } 8192d61bbb3SSatish Balay 8204a2ae208SSatish Balay #undef __FUNCT__ 8214a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_4" 822dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 8232d61bbb3SSatish Balay { 8242d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 825dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,x1,x2,x3,x4,*yarray,*zarray; 8263f1db9ecSBarry Smith MatScalar *v; 827dfbe8321SBarry Smith PetscErrorCode ierr; 8284eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 82926e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 8302d61bbb3SSatish Balay 8312d61bbb3SSatish Balay PetscFunctionBegin; 8321ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 83326e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 8342e8a6d31SBarry Smith if (zz != yy) { 83526e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 8362e8a6d31SBarry Smith } else { 83726e093fcSHong Zhang zarray = yarray; 8382e8a6d31SBarry Smith } 8392d61bbb3SSatish Balay 8402d61bbb3SSatish Balay idx = a->j; 8412d61bbb3SSatish Balay v = a->a; 84226e093fcSHong Zhang if (usecprow){ 8434eb6d288SHong Zhang if (zz != yy){ 8444eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,4*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 8454eb6d288SHong Zhang } 84626e093fcSHong Zhang mbs = a->compressedrow.nrows; 84726e093fcSHong Zhang ii = a->compressedrow.i; 8487b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 84926e093fcSHong Zhang } else { 8502d61bbb3SSatish Balay ii = a->i; 85126e093fcSHong Zhang y = yarray; 85226e093fcSHong Zhang z = zarray; 85326e093fcSHong Zhang } 8542d61bbb3SSatish Balay 8552d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 8562d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 85726e093fcSHong Zhang if (usecprow){ 8587b2bb3b9SHong Zhang z = zarray + 4*ridx[i]; 8597b2bb3b9SHong Zhang y = yarray + 4*ridx[i]; 86026e093fcSHong Zhang } 8612d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; 8622d61bbb3SSatish Balay for (j=0; j<n; j++) { 8632d61bbb3SSatish Balay xb = x + 4*(*idx++); 8642d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 8652d61bbb3SSatish Balay sum1 += v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 8662d61bbb3SSatish Balay sum2 += v[1]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 8672d61bbb3SSatish Balay sum3 += v[2]*x1 + v[6]*x2 + v[10]*x3 + v[14]*x4; 8682d61bbb3SSatish Balay sum4 += v[3]*x1 + v[7]*x2 + v[11]*x3 + v[15]*x4; 8692d61bbb3SSatish Balay v += 16; 8702d61bbb3SSatish Balay } 8712d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; 87226e093fcSHong Zhang if (!usecprow){ 8732d61bbb3SSatish Balay z += 4; y += 4; 8742d61bbb3SSatish Balay } 87526e093fcSHong Zhang } 8761ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 87726e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 8782e8a6d31SBarry Smith if (zz != yy) { 87926e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 8802e8a6d31SBarry Smith } 881efee365bSSatish Balay ierr = PetscLogFlops(32*a->nz);CHKERRQ(ierr); 8822d61bbb3SSatish Balay PetscFunctionReturn(0); 8832d61bbb3SSatish Balay } 8842d61bbb3SSatish Balay 8854a2ae208SSatish Balay #undef __FUNCT__ 8864a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_5" 887dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 8882d61bbb3SSatish Balay { 8892d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 890dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,x1,x2,x3,x4,x5; 89126e093fcSHong Zhang PetscScalar *yarray,*zarray; 8923f1db9ecSBarry Smith MatScalar *v; 893dfbe8321SBarry Smith PetscErrorCode ierr; 8944eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 89526e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 8962d61bbb3SSatish Balay 8972d61bbb3SSatish Balay PetscFunctionBegin; 8981ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 89926e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 9002e8a6d31SBarry Smith if (zz != yy) { 90126e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 9022e8a6d31SBarry Smith } else { 90326e093fcSHong Zhang zarray = yarray; 9042e8a6d31SBarry Smith } 9052d61bbb3SSatish Balay 9062d61bbb3SSatish Balay idx = a->j; 9072d61bbb3SSatish Balay v = a->a; 90826e093fcSHong Zhang if (usecprow){ 9094eb6d288SHong Zhang if (zz != yy){ 9104eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,5*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 9114eb6d288SHong Zhang } 91226e093fcSHong Zhang mbs = a->compressedrow.nrows; 91326e093fcSHong Zhang ii = a->compressedrow.i; 9147b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 91526e093fcSHong Zhang } else { 9162d61bbb3SSatish Balay ii = a->i; 91726e093fcSHong Zhang y = yarray; 91826e093fcSHong Zhang z = zarray; 91926e093fcSHong Zhang } 9202d61bbb3SSatish Balay 9212d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 9222d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 92326e093fcSHong Zhang if (usecprow){ 9247b2bb3b9SHong Zhang z = zarray + 5*ridx[i]; 9257b2bb3b9SHong Zhang y = yarray + 5*ridx[i]; 92626e093fcSHong Zhang } 9272d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; sum5 = y[4]; 9282d61bbb3SSatish Balay for (j=0; j<n; j++) { 9292d61bbb3SSatish Balay xb = x + 5*(*idx++); 9302d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; 9312d61bbb3SSatish Balay sum1 += v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4 + v[20]*x5; 9322d61bbb3SSatish Balay sum2 += v[1]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4 + v[21]*x5; 9332d61bbb3SSatish Balay sum3 += v[2]*x1 + v[7]*x2 + v[12]*x3 + v[17]*x4 + v[22]*x5; 9342d61bbb3SSatish Balay sum4 += v[3]*x1 + v[8]*x2 + v[13]*x3 + v[18]*x4 + v[23]*x5; 9352d61bbb3SSatish Balay sum5 += v[4]*x1 + v[9]*x2 + v[14]*x3 + v[19]*x4 + v[24]*x5; 9362d61bbb3SSatish Balay v += 25; 9372d61bbb3SSatish Balay } 9382d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; 93926e093fcSHong Zhang if (!usecprow){ 9402d61bbb3SSatish Balay z += 5; y += 5; 9412d61bbb3SSatish Balay } 94226e093fcSHong Zhang } 9431ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 94426e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 9452e8a6d31SBarry Smith if (zz != yy) { 94626e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 9472e8a6d31SBarry Smith } 948efee365bSSatish Balay ierr = PetscLogFlops(50*a->nz);CHKERRQ(ierr); 9492d61bbb3SSatish Balay PetscFunctionReturn(0); 9502d61bbb3SSatish Balay } 9514a2ae208SSatish Balay #undef __FUNCT__ 9524a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_6" 953dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 95415091d37SBarry Smith { 95515091d37SBarry Smith Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 956dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,sum6; 95726e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,*yarray,*zarray; 95815091d37SBarry Smith MatScalar *v; 959dfbe8321SBarry Smith PetscErrorCode ierr; 9604eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 96126e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 96215091d37SBarry Smith 96315091d37SBarry Smith PetscFunctionBegin; 9641ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 96526e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 96615091d37SBarry Smith if (zz != yy) { 96726e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 96815091d37SBarry Smith } else { 96926e093fcSHong Zhang zarray = yarray; 97015091d37SBarry Smith } 97115091d37SBarry Smith 97215091d37SBarry Smith idx = a->j; 97315091d37SBarry Smith v = a->a; 97426e093fcSHong Zhang if (usecprow){ 9754eb6d288SHong Zhang if (zz != yy){ 9764eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,6*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 9774eb6d288SHong Zhang } 97826e093fcSHong Zhang mbs = a->compressedrow.nrows; 97926e093fcSHong Zhang ii = a->compressedrow.i; 9807b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 98126e093fcSHong Zhang } else { 98215091d37SBarry Smith ii = a->i; 98326e093fcSHong Zhang y = yarray; 98426e093fcSHong Zhang z = zarray; 98526e093fcSHong Zhang } 98615091d37SBarry Smith 98715091d37SBarry Smith for (i=0; i<mbs; i++) { 98815091d37SBarry Smith n = ii[1] - ii[0]; ii++; 98926e093fcSHong Zhang if (usecprow){ 9907b2bb3b9SHong Zhang z = zarray + 6*ridx[i]; 9917b2bb3b9SHong Zhang y = yarray + 6*ridx[i]; 99226e093fcSHong Zhang } 99315091d37SBarry Smith sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; sum5 = y[4]; sum6 = y[5]; 99415091d37SBarry Smith for (j=0; j<n; j++) { 9953b95cb0eSSatish Balay xb = x + 6*(*idx++); 99615091d37SBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; 99715091d37SBarry Smith sum1 += v[0]*x1 + v[6]*x2 + v[12]*x3 + v[18]*x4 + v[24]*x5 + v[30]*x6; 99815091d37SBarry Smith sum2 += v[1]*x1 + v[7]*x2 + v[13]*x3 + v[19]*x4 + v[25]*x5 + v[31]*x6; 99915091d37SBarry Smith sum3 += v[2]*x1 + v[8]*x2 + v[14]*x3 + v[20]*x4 + v[26]*x5 + v[32]*x6; 100015091d37SBarry Smith sum4 += v[3]*x1 + v[9]*x2 + v[15]*x3 + v[21]*x4 + v[27]*x5 + v[33]*x6; 100115091d37SBarry Smith sum5 += v[4]*x1 + v[10]*x2 + v[16]*x3 + v[22]*x4 + v[28]*x5 + v[34]*x6; 100215091d37SBarry Smith sum6 += v[5]*x1 + v[11]*x2 + v[17]*x3 + v[23]*x4 + v[29]*x5 + v[35]*x6; 100315091d37SBarry Smith v += 36; 100415091d37SBarry Smith } 100515091d37SBarry Smith z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; 100626e093fcSHong Zhang if (!usecprow){ 100715091d37SBarry Smith z += 6; y += 6; 100815091d37SBarry Smith } 100926e093fcSHong Zhang } 10101ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 101126e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 101215091d37SBarry Smith if (zz != yy) { 101326e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 101415091d37SBarry Smith } 1015efee365bSSatish Balay ierr = PetscLogFlops(72*a->nz);CHKERRQ(ierr); 101615091d37SBarry Smith PetscFunctionReturn(0); 101715091d37SBarry Smith } 10182d61bbb3SSatish Balay 10194a2ae208SSatish Balay #undef __FUNCT__ 10204a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_7" 1021dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 10222d61bbb3SSatish Balay { 10232d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1024dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,sum6,sum7; 102526e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,x7,*yarray,*zarray; 10263f1db9ecSBarry Smith MatScalar *v; 1027dfbe8321SBarry Smith PetscErrorCode ierr; 10287b2bb3b9SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 102926e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 10302d61bbb3SSatish Balay 10312d61bbb3SSatish Balay PetscFunctionBegin; 10321ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 103326e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 10342e8a6d31SBarry Smith if (zz != yy) { 103526e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 10362e8a6d31SBarry Smith } else { 103726e093fcSHong Zhang zarray = yarray; 10382e8a6d31SBarry Smith } 10392d61bbb3SSatish Balay 10402d61bbb3SSatish Balay idx = a->j; 10412d61bbb3SSatish Balay v = a->a; 104226e093fcSHong Zhang if (usecprow){ 10434eb6d288SHong Zhang if (zz != yy){ 10444eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,7*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 10454eb6d288SHong Zhang } 104626e093fcSHong Zhang mbs = a->compressedrow.nrows; 104726e093fcSHong Zhang ii = a->compressedrow.i; 10487b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 104926e093fcSHong Zhang } else { 10502d61bbb3SSatish Balay ii = a->i; 105126e093fcSHong Zhang y = yarray; 105226e093fcSHong Zhang z = zarray; 105326e093fcSHong Zhang } 10542d61bbb3SSatish Balay 10552d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 10562d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 105726e093fcSHong Zhang if (usecprow){ 10587b2bb3b9SHong Zhang z = zarray + 7*ridx[i]; 10597b2bb3b9SHong Zhang y = yarray + 7*ridx[i]; 106026e093fcSHong Zhang } 10612d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; sum5 = y[4]; sum6 = y[5]; sum7 = y[6]; 10622d61bbb3SSatish Balay for (j=0; j<n; j++) { 10632d61bbb3SSatish Balay xb = x + 7*(*idx++); 10642d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; x7 = xb[6]; 10652d61bbb3SSatish Balay sum1 += v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4 + v[28]*x5 + v[35]*x6 + v[42]*x7; 10662d61bbb3SSatish Balay sum2 += v[1]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4 + v[29]*x5 + v[36]*x6 + v[43]*x7; 10672d61bbb3SSatish Balay sum3 += v[2]*x1 + v[9]*x2 + v[16]*x3 + v[23]*x4 + v[30]*x5 + v[37]*x6 + v[44]*x7; 10682d61bbb3SSatish Balay sum4 += v[3]*x1 + v[10]*x2 + v[17]*x3 + v[24]*x4 + v[31]*x5 + v[38]*x6 + v[45]*x7; 10692d61bbb3SSatish Balay sum5 += v[4]*x1 + v[11]*x2 + v[18]*x3 + v[25]*x4 + v[32]*x5 + v[39]*x6 + v[46]*x7; 10702d61bbb3SSatish Balay sum6 += v[5]*x1 + v[12]*x2 + v[19]*x3 + v[26]*x4 + v[33]*x5 + v[40]*x6 + v[47]*x7; 10712d61bbb3SSatish Balay sum7 += v[6]*x1 + v[13]*x2 + v[20]*x3 + v[27]*x4 + v[34]*x5 + v[41]*x6 + v[48]*x7; 10722d61bbb3SSatish Balay v += 49; 10732d61bbb3SSatish Balay } 10742d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; z[6] = sum7; 107526e093fcSHong Zhang if (!usecprow){ 10762d61bbb3SSatish Balay z += 7; y += 7; 10772d61bbb3SSatish Balay } 107826e093fcSHong Zhang } 10791ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 108026e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 10812e8a6d31SBarry Smith if (zz != yy) { 108226e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 10832e8a6d31SBarry Smith } 1084efee365bSSatish Balay ierr = PetscLogFlops(98*a->nz);CHKERRQ(ierr); 10852d61bbb3SSatish Balay PetscFunctionReturn(0); 10862d61bbb3SSatish Balay } 1087218c64b6SSatish Balay 10884a2ae208SSatish Balay #undef __FUNCT__ 10894a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_N" 1090dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_N(Mat A,Vec xx,Vec yy,Vec zz) 10912d61bbb3SSatish Balay { 10922d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1093dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,*work,*workt,*y,*zarray; 10943f1db9ecSBarry Smith MatScalar *v; 10956849ba73SBarry Smith PetscErrorCode ierr; 109626e093fcSHong Zhang PetscInt mbs,i,*idx,*ii,bs=A->bs,j,n,bs2=a->bs2; 10977b2bb3b9SHong Zhang PetscInt ncols,k,*ridx=PETSC_NULL; 109826e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 1099218c64b6SSatish Balay 11002d61bbb3SSatish Balay PetscFunctionBegin; 11011ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 110226e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 1103b2e7d493SHong Zhang if (zz != yy) { 11041ebc52fbSHong Zhang ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 110526e093fcSHong Zhang ierr = PetscMemcpy(zarray,y,yy->n*sizeof(PetscScalar));CHKERRQ(ierr); 11061ebc52fbSHong Zhang ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 1107b2e7d493SHong Zhang } 11082d61bbb3SSatish Balay 11092d61bbb3SSatish Balay idx = a->j; 11102d61bbb3SSatish Balay v = a->a; 111126e093fcSHong Zhang if (usecprow){ 111226e093fcSHong Zhang mbs = a->compressedrow.nrows; 111326e093fcSHong Zhang ii = a->compressedrow.i; 11147b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 111526e093fcSHong Zhang } else { 111626e093fcSHong Zhang mbs = a->mbs; 11172d61bbb3SSatish Balay ii = a->i; 111826e093fcSHong Zhang z = zarray; 111926e093fcSHong Zhang } 11202d61bbb3SSatish Balay 11212d61bbb3SSatish Balay if (!a->mult_work) { 1122273d9f13SBarry Smith k = PetscMax(A->m,A->n); 112387828ca2SBarry Smith ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 11242d61bbb3SSatish Balay } 11252d61bbb3SSatish Balay work = a->mult_work; 11262d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 11272d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 11282d61bbb3SSatish Balay ncols = n*bs; 11292d61bbb3SSatish Balay workt = work; 11302d61bbb3SSatish Balay for (j=0; j<n; j++) { 11312d61bbb3SSatish Balay xb = x + bs*(*idx++); 11322d61bbb3SSatish Balay for (k=0; k<bs; k++) workt[k] = xb[k]; 11332d61bbb3SSatish Balay workt += bs; 11342d61bbb3SSatish Balay } 11357b2bb3b9SHong Zhang if (usecprow) z = zarray + bs*ridx[i]; 11363f1db9ecSBarry Smith Kernel_w_gets_w_plus_Ar_times_v(bs,ncols,work,v,z); 113771044d3cSBarry Smith /* BLASgemv_("N",&bs,&ncols,&_DOne,v,&bs,work,&_One,&_DOne,z,&_One); */ 11382d61bbb3SSatish Balay v += n*bs2; 113926e093fcSHong Zhang if (!usecprow){ 11402d61bbb3SSatish Balay z += bs; 11412d61bbb3SSatish Balay } 114226e093fcSHong Zhang } 11431ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 114426e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 1145efee365bSSatish Balay ierr = PetscLogFlops(2*a->nz*bs2);CHKERRQ(ierr); 11462d61bbb3SSatish Balay PetscFunctionReturn(0); 11472d61bbb3SSatish Balay } 11482d61bbb3SSatish Balay 11494a2ae208SSatish Balay #undef __FUNCT__ 11504a2ae208SSatish Balay #define __FUNCT__ "MatMultTranspose_SeqBAIJ" 1151dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqBAIJ(Mat A,Vec xx,Vec zz) 11522d61bbb3SSatish Balay { 11532d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 11543447b6efSHong Zhang PetscScalar zero = 0.0; 11556849ba73SBarry Smith PetscErrorCode ierr; 11562d61bbb3SSatish Balay 11572d61bbb3SSatish Balay PetscFunctionBegin; 1158f1af5d2fSBarry Smith ierr = VecSet(&zero,zz);CHKERRQ(ierr); 11593447b6efSHong Zhang ierr = MatMultTransposeAdd_SeqBAIJ(A,xx,zz,zz);CHKERRQ(ierr); 11602d61bbb3SSatish Balay 1161efee365bSSatish Balay ierr = PetscLogFlops(2*a->nz*a->bs2 - A->n);CHKERRQ(ierr); 11622d61bbb3SSatish Balay PetscFunctionReturn(0); 11632d61bbb3SSatish Balay } 11642d61bbb3SSatish Balay 11654a2ae208SSatish Balay #undef __FUNCT__ 11664a2ae208SSatish Balay #define __FUNCT__ "MatMultTransposeAdd_SeqBAIJ" 1167dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqBAIJ(Mat A,Vec xx,Vec yy,Vec zz) 11682d61bbb3SSatish Balay 11692d61bbb3SSatish Balay { 11702d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1171dcf5cc72SBarry Smith PetscScalar *zb,*x,*z,*xb = 0,x1,x2,x3,x4,x5; 11723f1db9ecSBarry Smith MatScalar *v; 11736849ba73SBarry Smith PetscErrorCode ierr; 11747b2bb3b9SHong Zhang PetscInt mbs,i,*idx,*ii,rval,bs=A->bs,j,n,bs2=a->bs2,*ib,*ridx=PETSC_NULL; 11753447b6efSHong Zhang Mat_CompressedRow cprow = a->compressedrow; 11763447b6efSHong Zhang PetscTruth usecprow=cprow.use; 11772d61bbb3SSatish Balay 11782d61bbb3SSatish Balay PetscFunctionBegin; 1179ef66eb69SBarry Smith if (yy != zz) { ierr = VecCopy(yy,zz);CHKERRQ(ierr); } 11803447b6efSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 11813447b6efSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 11822d61bbb3SSatish Balay 11832d61bbb3SSatish Balay idx = a->j; 11842d61bbb3SSatish Balay v = a->a; 11853447b6efSHong Zhang if (usecprow){ 11863447b6efSHong Zhang mbs = cprow.nrows; 11873447b6efSHong Zhang ii = cprow.i; 11887b2bb3b9SHong Zhang ridx = cprow.rindex; 11893447b6efSHong Zhang } else { 11903447b6efSHong Zhang mbs=a->mbs; 11912d61bbb3SSatish Balay ii = a->i; 1192f1af5d2fSBarry Smith xb = x; 11933447b6efSHong Zhang } 11942d61bbb3SSatish Balay 11952d61bbb3SSatish Balay switch (bs) { 11962d61bbb3SSatish Balay case 1: 11972d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 11987b2bb3b9SHong Zhang if (usecprow) xb = x + ridx[i]; 1199f1af5d2fSBarry Smith x1 = xb[0]; 12003447b6efSHong Zhang ib = idx + ii[0]; 12013447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 12022d61bbb3SSatish Balay for (j=0; j<n; j++) { 12032d61bbb3SSatish Balay rval = ib[j]; 1204f1af5d2fSBarry Smith z[rval] += *v * x1; 1205f1af5d2fSBarry Smith v++; 12062d61bbb3SSatish Balay } 12073447b6efSHong Zhang if (!usecprow) xb++; 12082d61bbb3SSatish Balay } 12092d61bbb3SSatish Balay break; 12102d61bbb3SSatish Balay case 2: 12112d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 12127b2bb3b9SHong Zhang if (usecprow) xb = x + 2*ridx[i]; 1213f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; 12143447b6efSHong Zhang ib = idx + ii[0]; 12153447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 12162d61bbb3SSatish Balay for (j=0; j<n; j++) { 12172d61bbb3SSatish Balay rval = ib[j]*2; 12182d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2; 12192d61bbb3SSatish Balay z[rval++] += v[2]*x1 + v[3]*x2; 12202d61bbb3SSatish Balay v += 4; 12212d61bbb3SSatish Balay } 12223447b6efSHong Zhang if (!usecprow) xb += 2; 12232d61bbb3SSatish Balay } 12242d61bbb3SSatish Balay break; 12252d61bbb3SSatish Balay case 3: 12262d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 12277b2bb3b9SHong Zhang if (usecprow) xb = x + 3*ridx[i]; 1228f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 12293447b6efSHong Zhang ib = idx + ii[0]; 12303447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 12312d61bbb3SSatish Balay for (j=0; j<n; j++) { 12322d61bbb3SSatish Balay rval = ib[j]*3; 12332d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2 + v[2]*x3; 12342d61bbb3SSatish Balay z[rval++] += v[3]*x1 + v[4]*x2 + v[5]*x3; 12352d61bbb3SSatish Balay z[rval++] += v[6]*x1 + v[7]*x2 + v[8]*x3; 12362d61bbb3SSatish Balay v += 9; 12372d61bbb3SSatish Balay } 12383447b6efSHong Zhang if (!usecprow) xb += 3; 12392d61bbb3SSatish Balay } 12402d61bbb3SSatish Balay break; 12412d61bbb3SSatish Balay case 4: 12422d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 12437b2bb3b9SHong Zhang if (usecprow) xb = x + 4*ridx[i]; 1244f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 12453447b6efSHong Zhang ib = idx + ii[0]; 12463447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 12472d61bbb3SSatish Balay for (j=0; j<n; j++) { 12482d61bbb3SSatish Balay rval = ib[j]*4; 12492d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4; 12502d61bbb3SSatish Balay z[rval++] += v[4]*x1 + v[5]*x2 + v[6]*x3 + v[7]*x4; 12512d61bbb3SSatish Balay z[rval++] += v[8]*x1 + v[9]*x2 + v[10]*x3 + v[11]*x4; 12522d61bbb3SSatish Balay z[rval++] += v[12]*x1 + v[13]*x2 + v[14]*x3 + v[15]*x4; 12532d61bbb3SSatish Balay v += 16; 12542d61bbb3SSatish Balay } 12553447b6efSHong Zhang if (!usecprow) xb += 4; 12562d61bbb3SSatish Balay } 12572d61bbb3SSatish Balay break; 12582d61bbb3SSatish Balay case 5: 12592d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 12607b2bb3b9SHong Zhang if (usecprow) xb = x + 5*ridx[i]; 1261f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 12622d61bbb3SSatish Balay x4 = xb[3]; x5 = xb[4]; 12633447b6efSHong Zhang ib = idx + ii[0]; 12643447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 12652d61bbb3SSatish Balay for (j=0; j<n; j++) { 12662d61bbb3SSatish Balay rval = ib[j]*5; 12672d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4 + v[4]*x5; 12682d61bbb3SSatish Balay z[rval++] += v[5]*x1 + v[6]*x2 + v[7]*x3 + v[8]*x4 + v[9]*x5; 12692d61bbb3SSatish Balay z[rval++] += v[10]*x1 + v[11]*x2 + v[12]*x3 + v[13]*x4 + v[14]*x5; 12702d61bbb3SSatish Balay z[rval++] += v[15]*x1 + v[16]*x2 + v[17]*x3 + v[18]*x4 + v[19]*x5; 12712d61bbb3SSatish Balay z[rval++] += v[20]*x1 + v[21]*x2 + v[22]*x3 + v[23]*x4 + v[24]*x5; 12722d61bbb3SSatish Balay v += 25; 12732d61bbb3SSatish Balay } 12743447b6efSHong Zhang if (!usecprow) xb += 5; 12752d61bbb3SSatish Balay } 12762d61bbb3SSatish Balay break; 1277f1af5d2fSBarry Smith default: { /* block sizes larger then 5 by 5 are handled by BLAS */ 1278690b6cddSBarry Smith PetscInt ncols,k; 12793447b6efSHong Zhang PetscScalar *work,*workt,*xtmp; 12803f1db9ecSBarry Smith 12812d61bbb3SSatish Balay if (!a->mult_work) { 1282273d9f13SBarry Smith k = PetscMax(A->m,A->n); 128387828ca2SBarry Smith ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 12842d61bbb3SSatish Balay } 12852d61bbb3SSatish Balay work = a->mult_work; 12863447b6efSHong Zhang xtmp = x; 12872d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 12882d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 12892d61bbb3SSatish Balay ncols = n*bs; 129087828ca2SBarry Smith ierr = PetscMemzero(work,ncols*sizeof(PetscScalar));CHKERRQ(ierr); 12913447b6efSHong Zhang if (usecprow) { 12927b2bb3b9SHong Zhang xtmp = x + bs*ridx[i]; 12933447b6efSHong Zhang } 12943447b6efSHong Zhang Kernel_w_gets_w_plus_trans_Ar_times_v(bs,ncols,xtmp,v,work); 129571044d3cSBarry Smith /* BLASgemv_("T",&bs,&ncols,&_DOne,v,&bs,xtmp,&_One,&_DOne,work,&_One); */ 12962d61bbb3SSatish Balay v += n*bs2; 12973447b6efSHong Zhang if (!usecprow) xtmp += bs; 12982d61bbb3SSatish Balay workt = work; 12992d61bbb3SSatish Balay for (j=0; j<n; j++) { 13002d61bbb3SSatish Balay zb = z + bs*(*idx++); 13012d61bbb3SSatish Balay for (k=0; k<bs; k++) zb[k] += workt[k] ; 13022d61bbb3SSatish Balay workt += bs; 13032d61bbb3SSatish Balay } 13042d61bbb3SSatish Balay } 13052d61bbb3SSatish Balay } 13062d61bbb3SSatish Balay } 13073447b6efSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 13083447b6efSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 1309efee365bSSatish Balay ierr = PetscLogFlops(2*a->nz*a->bs2);CHKERRQ(ierr); 13102d61bbb3SSatish Balay PetscFunctionReturn(0); 13112d61bbb3SSatish Balay } 13122d61bbb3SSatish Balay 13134a2ae208SSatish Balay #undef __FUNCT__ 13144a2ae208SSatish Balay #define __FUNCT__ "MatScale_SeqBAIJ" 1315dfbe8321SBarry Smith PetscErrorCode MatScale_SeqBAIJ(const PetscScalar *alpha,Mat inA) 13162d61bbb3SSatish Balay { 13172d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)inA->data; 1318690b6cddSBarry Smith PetscInt totalnz = a->bs2*a->nz; 1319efee365bSSatish Balay PetscErrorCode ierr; 13203eda8832SBarry Smith #if defined(PETSC_USE_MAT_SINGLE) 1321690b6cddSBarry Smith PetscInt i; 132287052302SDinesh Kaushik #else 13234ce68768SBarry Smith PetscBLASInt tnz = (PetscBLASInt) totalnz,one = 1; 13243eda8832SBarry Smith #endif 13252d61bbb3SSatish Balay 13262d61bbb3SSatish Balay PetscFunctionBegin; 13273eda8832SBarry Smith #if defined(PETSC_USE_MAT_SINGLE) 13283eda8832SBarry Smith for (i=0; i<totalnz; i++) a->a[i] *= *alpha; 13293eda8832SBarry Smith #else 133071044d3cSBarry Smith BLASscal_(&tnz,(PetscScalar*)alpha,a->a,&one); 13313eda8832SBarry Smith #endif 1332efee365bSSatish Balay ierr = PetscLogFlops(totalnz);CHKERRQ(ierr); 13332d61bbb3SSatish Balay PetscFunctionReturn(0); 13342d61bbb3SSatish Balay } 13352d61bbb3SSatish Balay 13364a2ae208SSatish Balay #undef __FUNCT__ 13374a2ae208SSatish Balay #define __FUNCT__ "MatNorm_SeqBAIJ" 1338dfbe8321SBarry Smith PetscErrorCode MatNorm_SeqBAIJ(Mat A,NormType type,PetscReal *norm) 13392d61bbb3SSatish Balay { 13408a62d963SHong Zhang PetscErrorCode ierr; 13412d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 13423f1db9ecSBarry Smith MatScalar *v = a->a; 1343329f5518SBarry Smith PetscReal sum = 0.0; 1344521d7252SBarry Smith PetscInt i,j,k,bs=A->bs,nz=a->nz,bs2=a->bs2,k1; 13452d61bbb3SSatish Balay 13462d61bbb3SSatish Balay PetscFunctionBegin; 13472d61bbb3SSatish Balay if (type == NORM_FROBENIUS) { 13482d61bbb3SSatish Balay for (i=0; i< bs2*nz; i++) { 1349aa482453SBarry Smith #if defined(PETSC_USE_COMPLEX) 1350329f5518SBarry Smith sum += PetscRealPart(PetscConj(*v)*(*v)); v++; 13512d61bbb3SSatish Balay #else 13522d61bbb3SSatish Balay sum += (*v)*(*v); v++; 13532d61bbb3SSatish Balay #endif 13542d61bbb3SSatish Balay } 13552d61bbb3SSatish Balay *norm = sqrt(sum); 13568a62d963SHong Zhang } else if (type == NORM_1) { /* maximum column sum */ 13578a62d963SHong Zhang PetscReal *tmp; 13588a62d963SHong Zhang PetscInt *bcol = a->j; 13598a62d963SHong Zhang ierr = PetscMalloc((A->n+1)*sizeof(PetscReal),&tmp);CHKERRQ(ierr); 13608a62d963SHong Zhang ierr = PetscMemzero(tmp,A->n*sizeof(PetscReal));CHKERRQ(ierr); 13618a62d963SHong Zhang for (i=0; i<nz; i++){ 13628a62d963SHong Zhang for (j=0; j<bs; j++){ 13638a62d963SHong Zhang k1 = bs*(*bcol) + j; /* column index */ 13648a62d963SHong Zhang for (k=0; k<bs; k++){ 13658a62d963SHong Zhang tmp[k1] += PetscAbsScalar(*v); v++; 13668a62d963SHong Zhang } 13678a62d963SHong Zhang } 13688a62d963SHong Zhang bcol++; 13698a62d963SHong Zhang } 13708a62d963SHong Zhang *norm = 0.0; 13718a62d963SHong Zhang for (j=0; j<A->n; j++) { 13728a62d963SHong Zhang if (tmp[j] > *norm) *norm = tmp[j]; 13738a62d963SHong Zhang } 13748a62d963SHong Zhang ierr = PetscFree(tmp);CHKERRQ(ierr); 1375596552b5SBarry Smith } else if (type == NORM_INFINITY) { /* maximum row sum */ 1376596552b5SBarry Smith *norm = 0.0; 1377596552b5SBarry Smith for (k=0; k<bs; k++) { 137874f84c7bSSatish Balay for (j=0; j<a->mbs; j++) { 1379596552b5SBarry Smith v = a->a + bs2*a->i[j] + k; 1380596552b5SBarry Smith sum = 0.0; 1381596552b5SBarry Smith for (i=0; i<a->i[j+1]-a->i[j]; i++) { 13820e90e235SBarry Smith for (k1=0; k1<bs; k1++){ 1383596552b5SBarry Smith sum += PetscAbsScalar(*v); 1384596552b5SBarry Smith v += bs; 13852d61bbb3SSatish Balay } 13860e90e235SBarry Smith } 1387596552b5SBarry Smith if (sum > *norm) *norm = sum; 1388596552b5SBarry Smith } 1389596552b5SBarry Smith } 1390596552b5SBarry Smith } else { 139129bbc08cSBarry Smith SETERRQ(PETSC_ERR_SUP,"No support for this norm yet"); 13922d61bbb3SSatish Balay } 13932d61bbb3SSatish Balay PetscFunctionReturn(0); 13942d61bbb3SSatish Balay } 13952d61bbb3SSatish Balay 13962d61bbb3SSatish Balay 13974a2ae208SSatish Balay #undef __FUNCT__ 13984a2ae208SSatish Balay #define __FUNCT__ "MatEqual_SeqBAIJ" 1399dfbe8321SBarry Smith PetscErrorCode MatEqual_SeqBAIJ(Mat A,Mat B,PetscTruth* flg) 14002d61bbb3SSatish Balay { 14012d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ *)A->data,*b = (Mat_SeqBAIJ *)B->data; 1402dfbe8321SBarry Smith PetscErrorCode ierr; 14032d61bbb3SSatish Balay 14042d61bbb3SSatish Balay PetscFunctionBegin; 14052d61bbb3SSatish Balay /* If the matrix/block dimensions are not equal, or no of nonzeros or shift */ 1406521d7252SBarry Smith if ((A->m != B->m) || (A->n != B->n) || (A->bs != B->bs)|| (a->nz != b->nz)) { 1407273d9f13SBarry Smith *flg = PETSC_FALSE; 1408273d9f13SBarry Smith PetscFunctionReturn(0); 14092d61bbb3SSatish Balay } 14102d61bbb3SSatish Balay 14112d61bbb3SSatish Balay /* if the a->i are the same */ 1412690b6cddSBarry Smith ierr = PetscMemcmp(a->i,b->i,(a->mbs+1)*sizeof(PetscInt),flg);CHKERRQ(ierr); 1413abc0a331SBarry Smith if (!*flg) { 14140f5bd95cSBarry Smith PetscFunctionReturn(0); 14152d61bbb3SSatish Balay } 14162d61bbb3SSatish Balay 14172d61bbb3SSatish Balay /* if a->j are the same */ 1418690b6cddSBarry Smith ierr = PetscMemcmp(a->j,b->j,(a->nz)*sizeof(PetscInt),flg);CHKERRQ(ierr); 1419abc0a331SBarry Smith if (!*flg) { 14200f5bd95cSBarry Smith PetscFunctionReturn(0); 14212d61bbb3SSatish Balay } 14222d61bbb3SSatish Balay /* if a->a are the same */ 1423521d7252SBarry Smith ierr = PetscMemcmp(a->a,b->a,(a->nz)*(A->bs)*(B->bs)*sizeof(PetscScalar),flg);CHKERRQ(ierr); 14242d61bbb3SSatish Balay PetscFunctionReturn(0); 14252d61bbb3SSatish Balay 14262d61bbb3SSatish Balay } 14272d61bbb3SSatish Balay 14284a2ae208SSatish Balay #undef __FUNCT__ 14294a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonal_SeqBAIJ" 1430dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_SeqBAIJ(Mat A,Vec v) 14312d61bbb3SSatish Balay { 14322d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1433dfbe8321SBarry Smith PetscErrorCode ierr; 1434690b6cddSBarry Smith PetscInt i,j,k,n,row,bs,*ai,*aj,ambs,bs2; 143587828ca2SBarry Smith PetscScalar *x,zero = 0.0; 14363f1db9ecSBarry Smith MatScalar *aa,*aa_j; 14372d61bbb3SSatish Balay 14382d61bbb3SSatish Balay PetscFunctionBegin; 143929bbc08cSBarry Smith if (A->factor) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Not for factored matrix"); 1440521d7252SBarry Smith bs = A->bs; 14412d61bbb3SSatish Balay aa = a->a; 14422d61bbb3SSatish Balay ai = a->i; 14432d61bbb3SSatish Balay aj = a->j; 14442d61bbb3SSatish Balay ambs = a->mbs; 14452d61bbb3SSatish Balay bs2 = a->bs2; 14462d61bbb3SSatish Balay 1447e1311b90SBarry Smith ierr = VecSet(&zero,v);CHKERRQ(ierr); 14481ebc52fbSHong Zhang ierr = VecGetArray(v,&x);CHKERRQ(ierr); 1449e1311b90SBarry Smith ierr = VecGetLocalSize(v,&n);CHKERRQ(ierr); 1450273d9f13SBarry Smith if (n != A->m) SETERRQ(PETSC_ERR_ARG_SIZ,"Nonconforming matrix and vector"); 14512d61bbb3SSatish Balay for (i=0; i<ambs; i++) { 14522d61bbb3SSatish Balay for (j=ai[i]; j<ai[i+1]; j++) { 14532d61bbb3SSatish Balay if (aj[j] == i) { 14542d61bbb3SSatish Balay row = i*bs; 14552d61bbb3SSatish Balay aa_j = aa+j*bs2; 14562d61bbb3SSatish Balay for (k=0; k<bs2; k+=(bs+1),row++) x[row] = aa_j[k]; 14572d61bbb3SSatish Balay break; 14582d61bbb3SSatish Balay } 14592d61bbb3SSatish Balay } 14602d61bbb3SSatish Balay } 14611ebc52fbSHong Zhang ierr = VecRestoreArray(v,&x);CHKERRQ(ierr); 14622d61bbb3SSatish Balay PetscFunctionReturn(0); 14632d61bbb3SSatish Balay } 14642d61bbb3SSatish Balay 14654a2ae208SSatish Balay #undef __FUNCT__ 14664a2ae208SSatish Balay #define __FUNCT__ "MatDiagonalScale_SeqBAIJ" 1467dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_SeqBAIJ(Mat A,Vec ll,Vec rr) 14682d61bbb3SSatish Balay { 14692d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 147087828ca2SBarry Smith PetscScalar *l,*r,x,*li,*ri; 14713f1db9ecSBarry Smith MatScalar *aa,*v; 1472dfbe8321SBarry Smith PetscErrorCode ierr; 1473690b6cddSBarry Smith PetscInt i,j,k,lm,rn,M,m,n,*ai,*aj,mbs,tmp,bs,bs2; 14742d61bbb3SSatish Balay 14752d61bbb3SSatish Balay PetscFunctionBegin; 14762d61bbb3SSatish Balay ai = a->i; 14772d61bbb3SSatish Balay aj = a->j; 14782d61bbb3SSatish Balay aa = a->a; 1479273d9f13SBarry Smith m = A->m; 1480273d9f13SBarry Smith n = A->n; 1481521d7252SBarry Smith bs = A->bs; 14822d61bbb3SSatish Balay mbs = a->mbs; 14832d61bbb3SSatish Balay bs2 = a->bs2; 14842d61bbb3SSatish Balay if (ll) { 14851ebc52fbSHong Zhang ierr = VecGetArray(ll,&l);CHKERRQ(ierr); 1486e1311b90SBarry Smith ierr = VecGetLocalSize(ll,&lm);CHKERRQ(ierr); 148729bbc08cSBarry Smith if (lm != m) SETERRQ(PETSC_ERR_ARG_SIZ,"Left scaling vector wrong length"); 14882d61bbb3SSatish Balay for (i=0; i<mbs; i++) { /* for each block row */ 14892d61bbb3SSatish Balay M = ai[i+1] - ai[i]; 14902d61bbb3SSatish Balay li = l + i*bs; 14912d61bbb3SSatish Balay v = aa + bs2*ai[i]; 14922d61bbb3SSatish Balay for (j=0; j<M; j++) { /* for each block */ 14932d61bbb3SSatish Balay for (k=0; k<bs2; k++) { 14942d61bbb3SSatish Balay (*v++) *= li[k%bs]; 14952d61bbb3SSatish Balay } 14962d61bbb3SSatish Balay } 14972d61bbb3SSatish Balay } 14981ebc52fbSHong Zhang ierr = VecRestoreArray(ll,&l);CHKERRQ(ierr); 1499efee365bSSatish Balay ierr = PetscLogFlops(a->nz);CHKERRQ(ierr); 15002d61bbb3SSatish Balay } 15012d61bbb3SSatish Balay 15022d61bbb3SSatish Balay if (rr) { 15031ebc52fbSHong Zhang ierr = VecGetArray(rr,&r);CHKERRQ(ierr); 1504e1311b90SBarry Smith ierr = VecGetLocalSize(rr,&rn);CHKERRQ(ierr); 150529bbc08cSBarry Smith if (rn != n) SETERRQ(PETSC_ERR_ARG_SIZ,"Right scaling vector wrong length"); 15062d61bbb3SSatish Balay for (i=0; i<mbs; i++) { /* for each block row */ 15072d61bbb3SSatish Balay M = ai[i+1] - ai[i]; 15082d61bbb3SSatish Balay v = aa + bs2*ai[i]; 15092d61bbb3SSatish Balay for (j=0; j<M; j++) { /* for each block */ 15102d61bbb3SSatish Balay ri = r + bs*aj[ai[i]+j]; 15112d61bbb3SSatish Balay for (k=0; k<bs; k++) { 15122d61bbb3SSatish Balay x = ri[k]; 15132d61bbb3SSatish Balay for (tmp=0; tmp<bs; tmp++) (*v++) *= x; 15142d61bbb3SSatish Balay } 15152d61bbb3SSatish Balay } 15162d61bbb3SSatish Balay } 15171ebc52fbSHong Zhang ierr = VecRestoreArray(rr,&r);CHKERRQ(ierr); 1518efee365bSSatish Balay ierr = PetscLogFlops(a->nz);CHKERRQ(ierr); 15192d61bbb3SSatish Balay } 15202d61bbb3SSatish Balay PetscFunctionReturn(0); 15212d61bbb3SSatish Balay } 15222d61bbb3SSatish Balay 15232d61bbb3SSatish Balay 15244a2ae208SSatish Balay #undef __FUNCT__ 15254a2ae208SSatish Balay #define __FUNCT__ "MatGetInfo_SeqBAIJ" 1526dfbe8321SBarry Smith PetscErrorCode MatGetInfo_SeqBAIJ(Mat A,MatInfoType flag,MatInfo *info) 15272d61bbb3SSatish Balay { 15282d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 15292d61bbb3SSatish Balay 15302d61bbb3SSatish Balay PetscFunctionBegin; 1531273d9f13SBarry Smith info->rows_global = (double)A->m; 1532273d9f13SBarry Smith info->columns_global = (double)A->n; 1533273d9f13SBarry Smith info->rows_local = (double)A->m; 1534273d9f13SBarry Smith info->columns_local = (double)A->n; 15352d61bbb3SSatish Balay info->block_size = a->bs2; 15362d61bbb3SSatish Balay info->nz_allocated = a->maxnz; 15372d61bbb3SSatish Balay info->nz_used = a->bs2*a->nz; 15382d61bbb3SSatish Balay info->nz_unneeded = (double)(info->nz_allocated - info->nz_used); 15392d61bbb3SSatish Balay info->assemblies = A->num_ass; 15402d61bbb3SSatish Balay info->mallocs = a->reallocs; 15412d61bbb3SSatish Balay info->memory = A->mem; 15422d61bbb3SSatish Balay if (A->factor) { 15432d61bbb3SSatish Balay info->fill_ratio_given = A->info.fill_ratio_given; 15442d61bbb3SSatish Balay info->fill_ratio_needed = A->info.fill_ratio_needed; 15452d61bbb3SSatish Balay info->factor_mallocs = A->info.factor_mallocs; 15462d61bbb3SSatish Balay } else { 15472d61bbb3SSatish Balay info->fill_ratio_given = 0; 15482d61bbb3SSatish Balay info->fill_ratio_needed = 0; 15492d61bbb3SSatish Balay info->factor_mallocs = 0; 15502d61bbb3SSatish Balay } 15512d61bbb3SSatish Balay PetscFunctionReturn(0); 15522d61bbb3SSatish Balay } 15532d61bbb3SSatish Balay 15542d61bbb3SSatish Balay 15554a2ae208SSatish Balay #undef __FUNCT__ 15564a2ae208SSatish Balay #define __FUNCT__ "MatZeroEntries_SeqBAIJ" 1557dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_SeqBAIJ(Mat A) 15582d61bbb3SSatish Balay { 15592d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1560dfbe8321SBarry Smith PetscErrorCode ierr; 15612d61bbb3SSatish Balay 15622d61bbb3SSatish Balay PetscFunctionBegin; 1563549d3d68SSatish Balay ierr = PetscMemzero(a->a,a->bs2*a->i[a->mbs]*sizeof(MatScalar));CHKERRQ(ierr); 15642d61bbb3SSatish Balay PetscFunctionReturn(0); 15652d61bbb3SSatish Balay } 1566