1be1d678aSKris Buschelman #define PETSCMAT_DLL 2cac129eeSSatish Balay 37c4f633dSBarry Smith #include "../src/mat/impls/baij/seq/baij.h" 4c60f0209SBarry Smith #include "../src/mat/blockinvert.h" 50a835dfdSSatish Balay #include "petscbt.h" 6cac129eeSSatish Balay 74a2ae208SSatish Balay #undef __FUNCT__ 84a2ae208SSatish Balay #define __FUNCT__ "MatIncreaseOverlap_SeqBAIJ" 9690b6cddSBarry Smith PetscErrorCode MatIncreaseOverlap_SeqBAIJ(Mat A,PetscInt is_max,IS is[],PetscInt ov) 10a3192f15SSatish Balay { 11a3192f15SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 126849ba73SBarry Smith PetscErrorCode ierr; 135d0c19d7SBarry Smith PetscInt row,i,j,k,l,m,n,*nidx,isz,val,ival; 145d0c19d7SBarry Smith const PetscInt *idx; 15690b6cddSBarry Smith PetscInt start,end,*ai,*aj,bs,*nidx2; 16f1af5d2fSBarry Smith PetscBT table; 17a3192f15SSatish Balay 183a40ed3dSBarry Smith PetscFunctionBegin; 19a3192f15SSatish Balay m = a->mbs; 20a3192f15SSatish Balay ai = a->i; 21a3192f15SSatish Balay aj = a->j; 22d0f46423SBarry Smith bs = A->rmap->bs; 23a3192f15SSatish Balay 2429bbc08cSBarry Smith if (ov < 0) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"Negative overlap specified"); 25a3192f15SSatish Balay 266831982aSBarry Smith ierr = PetscBTCreate(m,table);CHKERRQ(ierr); 27690b6cddSBarry Smith ierr = PetscMalloc((m+1)*sizeof(PetscInt),&nidx);CHKERRQ(ierr); 28d0f46423SBarry Smith ierr = PetscMalloc((A->rmap->N+1)*sizeof(PetscInt),&nidx2);CHKERRQ(ierr); 29a3192f15SSatish Balay 30a3192f15SSatish Balay for (i=0; i<is_max; i++) { 31a3192f15SSatish Balay /* Initialise the two local arrays */ 32a3192f15SSatish Balay isz = 0; 336831982aSBarry Smith ierr = PetscBTMemzero(m,table);CHKERRQ(ierr); 34a3192f15SSatish Balay 35a3192f15SSatish Balay /* Extract the indices, assume there can be duplicate entries */ 36a3192f15SSatish Balay ierr = ISGetIndices(is[i],&idx);CHKERRQ(ierr); 37b9b97703SBarry Smith ierr = ISGetLocalSize(is[i],&n);CHKERRQ(ierr); 38a3192f15SSatish Balay 39a3192f15SSatish Balay /* Enter these into the temp arrays i.e mark table[row], enter row into new index */ 40a3192f15SSatish Balay for (j=0; j<n ; ++j){ 41218c64b6SSatish Balay ival = idx[j]/bs; /* convert the indices into block indices */ 425eee224dSHong Zhang if (ival>=m) SETERRQ(PETSC_ERR_ARG_OUTOFRANGE,"index greater than mat-dim"); 43f1af5d2fSBarry Smith if(!PetscBTLookupSet(table,ival)) { nidx[isz++] = ival;} 44a3192f15SSatish Balay } 45a3192f15SSatish Balay ierr = ISRestoreIndices(is[i],&idx);CHKERRQ(ierr); 46a3192f15SSatish Balay ierr = ISDestroy(is[i]);CHKERRQ(ierr); 47a3192f15SSatish Balay 48a3192f15SSatish Balay k = 0; 49a3192f15SSatish Balay for (j=0; j<ov; j++){ /* for each overlap*/ 50a3192f15SSatish Balay n = isz; 51a3192f15SSatish Balay for (; k<n ; k++){ /* do only those rows in nidx[k], which are not done yet */ 52a3192f15SSatish Balay row = nidx[k]; 53a3192f15SSatish Balay start = ai[row]; 54a3192f15SSatish Balay end = ai[row+1]; 55a3192f15SSatish Balay for (l = start; l<end ; l++){ 56a3192f15SSatish Balay val = aj[l]; 57f1af5d2fSBarry Smith if (!PetscBTLookupSet(table,val)) {nidx[isz++] = val;} 58a3192f15SSatish Balay } 59a3192f15SSatish Balay } 60a3192f15SSatish Balay } 61218c64b6SSatish Balay /* expand the Index Set */ 62218c64b6SSatish Balay for (j=0; j<isz; j++) { 63218c64b6SSatish Balay for (k=0; k<bs; k++) 64218c64b6SSatish Balay nidx2[j*bs+k] = nidx[j]*bs+k; 65218c64b6SSatish Balay } 66329f5518SBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,isz*bs,nidx2,is+i);CHKERRQ(ierr); 67a3192f15SSatish Balay } 686831982aSBarry Smith ierr = PetscBTDestroy(table);CHKERRQ(ierr); 69606d414cSSatish Balay ierr = PetscFree(nidx);CHKERRQ(ierr); 70606d414cSSatish Balay ierr = PetscFree(nidx2);CHKERRQ(ierr); 713a40ed3dSBarry Smith PetscFunctionReturn(0); 72a3192f15SSatish Balay } 731c351548SSatish Balay 744a2ae208SSatish Balay #undef __FUNCT__ 754a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrix_SeqBAIJ_Private" 764aa3045dSJed Brown PetscErrorCode MatGetSubMatrix_SeqBAIJ_Private(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B) 77736121d4SSatish Balay { 78736121d4SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data,*c; 796849ba73SBarry Smith PetscErrorCode ierr; 80690b6cddSBarry Smith PetscInt *smap,i,k,kstart,kend,oldcols = a->nbs,*lens; 81690b6cddSBarry Smith PetscInt row,mat_i,*mat_j,tcol,*mat_ilen; 825d0c19d7SBarry Smith const PetscInt *irow,*icol; 835d0c19d7SBarry Smith PetscInt nrows,ncols,*ssmap,bs=A->rmap->bs,bs2=a->bs2; 84690b6cddSBarry Smith PetscInt *aj = a->j,*ai = a->i; 853f1db9ecSBarry Smith MatScalar *mat_a; 86736121d4SSatish Balay Mat C; 8714ca34e6SBarry Smith PetscTruth flag,sorted; 88736121d4SSatish Balay 893a40ed3dSBarry Smith PetscFunctionBegin; 9014ca34e6SBarry Smith ierr = ISSorted(iscol,&sorted);CHKERRQ(ierr); 9114ca34e6SBarry Smith if (!sorted) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"IS is not sorted"); 92736121d4SSatish Balay 93736121d4SSatish Balay ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr); 94218c64b6SSatish Balay ierr = ISGetIndices(iscol,&icol);CHKERRQ(ierr); 95b9b97703SBarry Smith ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr); 96b9b97703SBarry Smith ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr); 97736121d4SSatish Balay 98690b6cddSBarry Smith ierr = PetscMalloc((1+oldcols)*sizeof(PetscInt),&smap);CHKERRQ(ierr); 99736121d4SSatish Balay ssmap = smap; 100690b6cddSBarry Smith ierr = PetscMalloc((1+nrows)*sizeof(PetscInt),&lens);CHKERRQ(ierr); 101690b6cddSBarry Smith ierr = PetscMemzero(smap,oldcols*sizeof(PetscInt));CHKERRQ(ierr); 102736121d4SSatish Balay for (i=0; i<ncols; i++) smap[icol[i]] = i+1; 103736121d4SSatish Balay /* determine lens of each row */ 104736121d4SSatish Balay for (i=0; i<nrows; i++) { 105736121d4SSatish Balay kstart = ai[irow[i]]; 106736121d4SSatish Balay kend = kstart + a->ilen[irow[i]]; 107736121d4SSatish Balay lens[i] = 0; 108736121d4SSatish Balay for (k=kstart; k<kend; k++) { 109736121d4SSatish Balay if (ssmap[aj[k]]) { 110736121d4SSatish Balay lens[i]++; 111736121d4SSatish Balay } 112736121d4SSatish Balay } 113736121d4SSatish Balay } 114736121d4SSatish Balay /* Create and fill new matrix */ 115736121d4SSatish Balay if (scall == MAT_REUSE_MATRIX) { 116736121d4SSatish Balay c = (Mat_SeqBAIJ *)((*B)->data); 117736121d4SSatish Balay 118d0f46423SBarry Smith if (c->mbs!=nrows || c->nbs!=ncols || (*B)->rmap->bs!=bs) SETERRQ(PETSC_ERR_ARG_SIZ,"Submatrix wrong size"); 119690b6cddSBarry Smith ierr = PetscMemcmp(c->ilen,lens,c->mbs *sizeof(PetscInt),&flag);CHKERRQ(ierr); 120abc0a331SBarry Smith if (!flag) { 12129bbc08cSBarry Smith SETERRQ(PETSC_ERR_ARG_SIZ,"Cannot reuse matrix. wrong no of nonzeros"); 122736121d4SSatish Balay } 123690b6cddSBarry Smith ierr = PetscMemzero(c->ilen,c->mbs*sizeof(PetscInt));CHKERRQ(ierr); 124736121d4SSatish Balay C = *B; 1253a40ed3dSBarry Smith } else { 1267adad957SLisandro Dalcin ierr = MatCreate(((PetscObject)A)->comm,&C);CHKERRQ(ierr); 127f69a0ea3SMatthew Knepley ierr = MatSetSizes(C,nrows*bs,ncols*bs,PETSC_DETERMINE,PETSC_DETERMINE);CHKERRQ(ierr); 1287adad957SLisandro Dalcin ierr = MatSetType(C,((PetscObject)A)->type_name);CHKERRQ(ierr); 129ab93d7beSBarry Smith ierr = MatSeqBAIJSetPreallocation_SeqBAIJ(C,bs,0,lens);CHKERRQ(ierr); 130736121d4SSatish Balay } 131736121d4SSatish Balay c = (Mat_SeqBAIJ *)(C->data); 132736121d4SSatish Balay for (i=0; i<nrows; i++) { 133736121d4SSatish Balay row = irow[i]; 134736121d4SSatish Balay kstart = ai[row]; 135736121d4SSatish Balay kend = kstart + a->ilen[row]; 136736121d4SSatish Balay mat_i = c->i[i]; 137736121d4SSatish Balay mat_j = c->j + mat_i; 138218c64b6SSatish Balay mat_a = c->a + mat_i*bs2; 139736121d4SSatish Balay mat_ilen = c->ilen + i; 140736121d4SSatish Balay for (k=kstart; k<kend; k++) { 141736121d4SSatish Balay if ((tcol=ssmap[a->j[k]])) { 142736121d4SSatish Balay *mat_j++ = tcol - 1; 143549d3d68SSatish Balay ierr = PetscMemcpy(mat_a,a->a+k*bs2,bs2*sizeof(MatScalar));CHKERRQ(ierr); 144549d3d68SSatish Balay mat_a += bs2; 145736121d4SSatish Balay (*mat_ilen)++; 146736121d4SSatish Balay } 147736121d4SSatish Balay } 148736121d4SSatish Balay } 149218c64b6SSatish Balay 150736121d4SSatish Balay /* Free work space */ 151736121d4SSatish Balay ierr = ISRestoreIndices(iscol,&icol);CHKERRQ(ierr); 152606d414cSSatish Balay ierr = PetscFree(smap);CHKERRQ(ierr); 153606d414cSSatish Balay ierr = PetscFree(lens);CHKERRQ(ierr); 1546d4a8577SBarry Smith ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1556d4a8577SBarry Smith ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 156736121d4SSatish Balay 157736121d4SSatish Balay ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr); 158736121d4SSatish Balay *B = C; 1593a40ed3dSBarry Smith PetscFunctionReturn(0); 160736121d4SSatish Balay } 161736121d4SSatish Balay 1624a2ae208SSatish Balay #undef __FUNCT__ 1634a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrix_SeqBAIJ" 1644aa3045dSJed Brown PetscErrorCode MatGetSubMatrix_SeqBAIJ(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B) 165218c64b6SSatish Balay { 166218c64b6SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 167218c64b6SSatish Balay IS is1,is2; 1686849ba73SBarry Smith PetscErrorCode ierr; 1695d0c19d7SBarry Smith PetscInt *vary,*iary,nrows,ncols,i,bs=A->rmap->bs,count; 1705d0c19d7SBarry Smith const PetscInt *irow,*icol; 171218c64b6SSatish Balay 1723a40ed3dSBarry Smith PetscFunctionBegin; 173218c64b6SSatish Balay ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr); 174218c64b6SSatish Balay ierr = ISGetIndices(iscol,&icol);CHKERRQ(ierr); 175b9b97703SBarry Smith ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr); 176b9b97703SBarry Smith ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr); 177218c64b6SSatish Balay 178218c64b6SSatish Balay /* Verify if the indices corespond to each element in a block 179218c64b6SSatish Balay and form the IS with compressed IS */ 180*fca92195SBarry Smith ierr = PetscMalloc2(a->mbs,PetscInt,&vary,a->mbs,PetscInt,&iary);CHKERRQ(ierr); 181*fca92195SBarry Smith ierr = PetscMemzero(vary,a->mbs*sizeof(PetscInt));CHKERRQ(ierr); 182218c64b6SSatish Balay for (i=0; i<nrows; i++) vary[irow[i]/bs]++; 183218c64b6SSatish Balay count = 0; 184218c64b6SSatish Balay for (i=0; i<a->mbs; i++) { 185634064b4SBarry Smith if (vary[i]!=0 && vary[i]!=bs) SETERRQ(PETSC_ERR_ARG_SIZ,"Index set does not match blocks"); 186218c64b6SSatish Balay if (vary[i]==bs) iary[count++] = i; 187218c64b6SSatish Balay } 188029af93fSBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,count,iary,&is1);CHKERRQ(ierr); 189218c64b6SSatish Balay 190690b6cddSBarry Smith ierr = PetscMemzero(vary,(a->mbs)*sizeof(PetscInt));CHKERRQ(ierr); 191218c64b6SSatish Balay for (i=0; i<ncols; i++) vary[icol[i]/bs]++; 192218c64b6SSatish Balay count = 0; 193218c64b6SSatish Balay for (i=0; i<a->mbs; i++) { 194634064b4SBarry Smith if (vary[i]!=0 && vary[i]!=bs) SETERRQ(PETSC_ERR_PLIB,"Internal error in PETSc"); 195218c64b6SSatish Balay if (vary[i]==bs) iary[count++] = i; 196218c64b6SSatish Balay } 197029af93fSBarry Smith ierr = ISCreateGeneral(PETSC_COMM_SELF,count,iary,&is2);CHKERRQ(ierr); 198218c64b6SSatish Balay ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr); 199218c64b6SSatish Balay ierr = ISRestoreIndices(iscol,&icol);CHKERRQ(ierr); 200*fca92195SBarry Smith ierr = PetscFree2(vary,iary);CHKERRQ(ierr); 201218c64b6SSatish Balay 2024aa3045dSJed Brown ierr = MatGetSubMatrix_SeqBAIJ_Private(A,is1,is2,scall,B);CHKERRQ(ierr); 203218c64b6SSatish Balay ISDestroy(is1); 204218c64b6SSatish Balay ISDestroy(is2); 2053a40ed3dSBarry Smith PetscFunctionReturn(0); 206218c64b6SSatish Balay } 207218c64b6SSatish Balay 2084a2ae208SSatish Balay #undef __FUNCT__ 2094a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrices_SeqBAIJ" 210690b6cddSBarry Smith PetscErrorCode MatGetSubMatrices_SeqBAIJ(Mat A,PetscInt n,const IS irow[],const IS icol[],MatReuse scall,Mat *B[]) 211736121d4SSatish Balay { 2126849ba73SBarry Smith PetscErrorCode ierr; 213690b6cddSBarry Smith PetscInt i; 214736121d4SSatish Balay 2153a40ed3dSBarry Smith PetscFunctionBegin; 216736121d4SSatish Balay if (scall == MAT_INITIAL_MATRIX) { 21782502324SSatish Balay ierr = PetscMalloc((n+1)*sizeof(Mat),B);CHKERRQ(ierr); 218736121d4SSatish Balay } 219736121d4SSatish Balay 220736121d4SSatish Balay for (i=0; i<n; i++) { 2214aa3045dSJed Brown ierr = MatGetSubMatrix_SeqBAIJ(A,irow[i],icol[i],scall,&(*B)[i]);CHKERRQ(ierr); 222736121d4SSatish Balay } 2233a40ed3dSBarry Smith PetscFunctionReturn(0); 224736121d4SSatish Balay } 225218c64b6SSatish Balay 226218c64b6SSatish Balay 2272d61bbb3SSatish Balay /* -------------------------------------------------------*/ 2282d61bbb3SSatish Balay /* Should check that shapes of vectors and matrices match */ 2292d61bbb3SSatish Balay /* -------------------------------------------------------*/ 230d9eff348SSatish Balay #include "petscblaslapack.h" 2312d61bbb3SSatish Balay 2324a2ae208SSatish Balay #undef __FUNCT__ 2334a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_1" 234dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_1(Mat A,Vec xx,Vec zz) 2352d61bbb3SSatish Balay { 2362d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 237d9fead3dSBarry Smith PetscScalar *z,sum; 238d9fead3dSBarry Smith const PetscScalar *x; 239d9fead3dSBarry Smith const MatScalar *v; 2406849ba73SBarry Smith PetscErrorCode ierr; 2412162cab8SBarry Smith PetscInt mbs,i,n,nonzerorow=0; 2422162cab8SBarry Smith const PetscInt *idx,*ii,*ridx=PETSC_NULL; 24326e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 2442d61bbb3SSatish Balay 2452d61bbb3SSatish Balay PetscFunctionBegin; 246d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 2471ebc52fbSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 2482d61bbb3SSatish Balay 24926e093fcSHong Zhang if (usecprow){ 25026e093fcSHong Zhang mbs = a->compressedrow.nrows; 25126e093fcSHong Zhang ii = a->compressedrow.i; 2527b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 253a1c3900fSBarry Smith ierr = PetscMemzero(z,mbs*sizeof(PetscScalar));CHKERRQ(ierr); 25426e093fcSHong Zhang } else { 25526e093fcSHong Zhang mbs = a->mbs; 2562d61bbb3SSatish Balay ii = a->i; 25726e093fcSHong Zhang } 2582d61bbb3SSatish Balay 2592d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 260ee54c7eeSHong Zhang n = ii[1] - ii[0]; 261ee54c7eeSHong Zhang v = a->a + ii[0]; 262ee54c7eeSHong Zhang idx = a->j + ii[0]; 263ee54c7eeSHong Zhang ii++; 2642d61bbb3SSatish Balay sum = 0.0; 2652162cab8SBarry Smith PetscSparseDensePlusDot(sum,x,v,idx,n); 26626e093fcSHong Zhang if (usecprow){ 2677b2bb3b9SHong Zhang z[ridx[i]] = sum; 26826e093fcSHong Zhang } else { 269122f12eaSBarry Smith nonzerorow += (n>0); 2702d61bbb3SSatish Balay z[i] = sum; 2712d61bbb3SSatish Balay } 27226e093fcSHong Zhang } 273d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 2741ebc52fbSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 275dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*a->nz - nonzerorow);CHKERRQ(ierr); 2762d61bbb3SSatish Balay PetscFunctionReturn(0); 2772d61bbb3SSatish Balay } 2782d61bbb3SSatish Balay 2794a2ae208SSatish Balay #undef __FUNCT__ 2804a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_2" 281dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_2(Mat A,Vec xx,Vec zz) 2822d61bbb3SSatish Balay { 2832d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 284d9fead3dSBarry Smith PetscScalar *z = 0,sum1,sum2,*zarray; 285d9fead3dSBarry Smith const PetscScalar *x,*xb; 28687828ca2SBarry Smith PetscScalar x1,x2; 287d9fead3dSBarry Smith const MatScalar *v; 288dfbe8321SBarry Smith PetscErrorCode ierr; 28998c9bda7SSatish Balay PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL,nonzerorow=0; 29026e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 2912d61bbb3SSatish Balay 2922d61bbb3SSatish Balay PetscFunctionBegin; 293d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 29426e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 2952d61bbb3SSatish Balay 2962d61bbb3SSatish Balay idx = a->j; 2972d61bbb3SSatish Balay v = a->a; 29826e093fcSHong Zhang if (usecprow){ 29926e093fcSHong Zhang mbs = a->compressedrow.nrows; 30026e093fcSHong Zhang ii = a->compressedrow.i; 3017b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 30226e093fcSHong Zhang } else { 30326e093fcSHong Zhang mbs = a->mbs; 3042d61bbb3SSatish Balay ii = a->i; 30526e093fcSHong Zhang z = zarray; 30626e093fcSHong Zhang } 3072d61bbb3SSatish Balay 3082d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 3092d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 3102d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; 31198c9bda7SSatish Balay nonzerorow += (n>0); 3122d61bbb3SSatish Balay for (j=0; j<n; j++) { 3132d61bbb3SSatish Balay xb = x + 2*(*idx++); x1 = xb[0]; x2 = xb[1]; 3142d61bbb3SSatish Balay sum1 += v[0]*x1 + v[2]*x2; 3152d61bbb3SSatish Balay sum2 += v[1]*x1 + v[3]*x2; 3162d61bbb3SSatish Balay v += 4; 3172d61bbb3SSatish Balay } 3187b2bb3b9SHong Zhang if (usecprow) z = zarray + 2*ridx[i]; 3192d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; 32026e093fcSHong Zhang if (!usecprow) z += 2; 3212d61bbb3SSatish Balay } 322d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 32326e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 324dc0b31edSSatish Balay ierr = PetscLogFlops(8.0*a->nz - 2.0*nonzerorow);CHKERRQ(ierr); 3252d61bbb3SSatish Balay PetscFunctionReturn(0); 3262d61bbb3SSatish Balay } 3272d61bbb3SSatish Balay 3284a2ae208SSatish Balay #undef __FUNCT__ 3294a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_3" 330dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_3(Mat A,Vec xx,Vec zz) 3312d61bbb3SSatish Balay { 3322d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 333d9fead3dSBarry Smith PetscScalar *z = 0,sum1,sum2,sum3,x1,x2,x3,*zarray; 334d9fead3dSBarry Smith const PetscScalar *x,*xb; 335d9fead3dSBarry Smith const MatScalar *v; 336dfbe8321SBarry Smith PetscErrorCode ierr; 337028cd4eaSSatish Balay PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL,nonzerorow=0; 338028cd4eaSSatish Balay PetscTruth usecprow=a->compressedrow.use; 33926e093fcSHong Zhang 3402d61bbb3SSatish Balay 341b6410449SSatish Balay #if defined(PETSC_HAVE_PRAGMA_DISJOINT) 342fee21e36SBarry Smith #pragma disjoint(*v,*z,*xb) 343fee21e36SBarry Smith #endif 344fee21e36SBarry Smith 3452d61bbb3SSatish Balay PetscFunctionBegin; 346d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 34726e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 3482d61bbb3SSatish Balay 3492d61bbb3SSatish Balay idx = a->j; 3502d61bbb3SSatish Balay v = a->a; 35126e093fcSHong Zhang if (usecprow){ 35226e093fcSHong Zhang mbs = a->compressedrow.nrows; 35326e093fcSHong Zhang ii = a->compressedrow.i; 3547b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 35526e093fcSHong Zhang } else { 35626e093fcSHong Zhang mbs = a->mbs; 3572d61bbb3SSatish Balay ii = a->i; 35826e093fcSHong Zhang z = zarray; 35926e093fcSHong Zhang } 3602d61bbb3SSatish Balay 3612d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 3622d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 3632d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; 36498c9bda7SSatish Balay nonzerorow += (n>0); 3652d61bbb3SSatish Balay for (j=0; j<n; j++) { 3662d61bbb3SSatish Balay xb = x + 3*(*idx++); x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 3672d61bbb3SSatish Balay sum1 += v[0]*x1 + v[3]*x2 + v[6]*x3; 3682d61bbb3SSatish Balay sum2 += v[1]*x1 + v[4]*x2 + v[7]*x3; 3692d61bbb3SSatish Balay sum3 += v[2]*x1 + v[5]*x2 + v[8]*x3; 3702d61bbb3SSatish Balay v += 9; 3712d61bbb3SSatish Balay } 3727b2bb3b9SHong Zhang if (usecprow) z = zarray + 3*ridx[i]; 3732d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; 37426e093fcSHong Zhang if (!usecprow) z += 3; 3752d61bbb3SSatish Balay } 376d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 37726e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 378dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*a->nz - 3.0*nonzerorow);CHKERRQ(ierr); 3792d61bbb3SSatish Balay PetscFunctionReturn(0); 3802d61bbb3SSatish Balay } 3812d61bbb3SSatish Balay 3824a2ae208SSatish Balay #undef __FUNCT__ 3834a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_4" 384dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_4(Mat A,Vec xx,Vec zz) 3852d61bbb3SSatish Balay { 3862d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 387d9fead3dSBarry Smith PetscScalar *z = 0,sum1,sum2,sum3,sum4,x1,x2,x3,x4,*zarray; 388d9fead3dSBarry Smith const PetscScalar *x,*xb; 389d9fead3dSBarry Smith const MatScalar *v; 390dfbe8321SBarry Smith PetscErrorCode ierr; 39198c9bda7SSatish Balay PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL,nonzerorow=0; 39226e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 3932d61bbb3SSatish Balay 3942d61bbb3SSatish Balay PetscFunctionBegin; 395d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 39626e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 3972d61bbb3SSatish Balay 3982d61bbb3SSatish Balay idx = a->j; 3992d61bbb3SSatish Balay v = a->a; 40026e093fcSHong Zhang if (usecprow){ 40126e093fcSHong Zhang mbs = a->compressedrow.nrows; 40226e093fcSHong Zhang ii = a->compressedrow.i; 4037b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 40426e093fcSHong Zhang } else { 40526e093fcSHong Zhang mbs = a->mbs; 4062d61bbb3SSatish Balay ii = a->i; 40726e093fcSHong Zhang z = zarray; 40826e093fcSHong Zhang } 4092d61bbb3SSatish Balay 4102d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 4112d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 4122d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; 41398c9bda7SSatish Balay nonzerorow += (n>0); 4142d61bbb3SSatish Balay for (j=0; j<n; j++) { 4152d61bbb3SSatish Balay xb = x + 4*(*idx++); 4162d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 4172d61bbb3SSatish Balay sum1 += v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 4182d61bbb3SSatish Balay sum2 += v[1]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 4192d61bbb3SSatish Balay sum3 += v[2]*x1 + v[6]*x2 + v[10]*x3 + v[14]*x4; 4202d61bbb3SSatish Balay sum4 += v[3]*x1 + v[7]*x2 + v[11]*x3 + v[15]*x4; 4212d61bbb3SSatish Balay v += 16; 4222d61bbb3SSatish Balay } 4237b2bb3b9SHong Zhang if (usecprow) z = zarray + 4*ridx[i]; 4242d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; 42526e093fcSHong Zhang if (!usecprow) z += 4; 4262d61bbb3SSatish Balay } 427d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 42826e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 429dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*a->nz - 4.0*nonzerorow);CHKERRQ(ierr); 4302d61bbb3SSatish Balay PetscFunctionReturn(0); 4312d61bbb3SSatish Balay } 4322d61bbb3SSatish Balay 4334a2ae208SSatish Balay #undef __FUNCT__ 4344a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_5" 435dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_5(Mat A,Vec xx,Vec zz) 4362d61bbb3SSatish Balay { 4372d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 438d9fead3dSBarry Smith PetscScalar sum1,sum2,sum3,sum4,sum5,x1,x2,x3,x4,x5,*z = 0,*zarray; 439d9fead3dSBarry Smith const PetscScalar *xb,*x; 440d9fead3dSBarry Smith const MatScalar *v; 441dfbe8321SBarry Smith PetscErrorCode ierr; 44298c9bda7SSatish Balay PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL,nonzerorow=0; 44326e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 4442d61bbb3SSatish Balay 445433994e6SBarry Smith PetscFunctionBegin; 446d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 44726e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 4482d61bbb3SSatish Balay 4492d61bbb3SSatish Balay idx = a->j; 4502d61bbb3SSatish Balay v = a->a; 45126e093fcSHong Zhang if (usecprow){ 45226e093fcSHong Zhang mbs = a->compressedrow.nrows; 45326e093fcSHong Zhang ii = a->compressedrow.i; 4547b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 45526e093fcSHong Zhang } else { 45626e093fcSHong Zhang mbs = a->mbs; 4572d61bbb3SSatish Balay ii = a->i; 45826e093fcSHong Zhang z = zarray; 45926e093fcSHong Zhang } 4602d61bbb3SSatish Balay 4612d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 4622d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 4632d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; sum5 = 0.0; 46498c9bda7SSatish Balay nonzerorow += (n>0); 4652d61bbb3SSatish Balay for (j=0; j<n; j++) { 4662d61bbb3SSatish Balay xb = x + 5*(*idx++); 4672d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; 4682d61bbb3SSatish Balay sum1 += v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4 + v[20]*x5; 4692d61bbb3SSatish Balay sum2 += v[1]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4 + v[21]*x5; 4702d61bbb3SSatish Balay sum3 += v[2]*x1 + v[7]*x2 + v[12]*x3 + v[17]*x4 + v[22]*x5; 4712d61bbb3SSatish Balay sum4 += v[3]*x1 + v[8]*x2 + v[13]*x3 + v[18]*x4 + v[23]*x5; 4722d61bbb3SSatish Balay sum5 += v[4]*x1 + v[9]*x2 + v[14]*x3 + v[19]*x4 + v[24]*x5; 4732d61bbb3SSatish Balay v += 25; 4742d61bbb3SSatish Balay } 4757b2bb3b9SHong Zhang if (usecprow) z = zarray + 5*ridx[i]; 4762d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; 47726e093fcSHong Zhang if (!usecprow) z += 5; 4782d61bbb3SSatish Balay } 479d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 48026e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 481dc0b31edSSatish Balay ierr = PetscLogFlops(50.0*a->nz - 5.0*nonzerorow);CHKERRQ(ierr); 4822d61bbb3SSatish Balay PetscFunctionReturn(0); 4832d61bbb3SSatish Balay } 4842d61bbb3SSatish Balay 48515091d37SBarry Smith 4864a2ae208SSatish Balay #undef __FUNCT__ 4874a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_6" 488dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_6(Mat A,Vec xx,Vec zz) 48915091d37SBarry Smith { 49015091d37SBarry Smith Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 491d9fead3dSBarry Smith PetscScalar *z = 0,sum1,sum2,sum3,sum4,sum5,sum6; 492d9fead3dSBarry Smith const PetscScalar *x,*xb; 49326e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,*zarray; 494d9fead3dSBarry Smith const MatScalar *v; 495dfbe8321SBarry Smith PetscErrorCode ierr; 49698c9bda7SSatish Balay PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL,nonzerorow=0; 49726e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 49815091d37SBarry Smith 499433994e6SBarry Smith PetscFunctionBegin; 500d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 50126e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 50215091d37SBarry Smith 50315091d37SBarry Smith idx = a->j; 50415091d37SBarry Smith v = a->a; 50526e093fcSHong Zhang if (usecprow){ 50626e093fcSHong Zhang mbs = a->compressedrow.nrows; 50726e093fcSHong Zhang ii = a->compressedrow.i; 5087b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 50926e093fcSHong Zhang } else { 51026e093fcSHong Zhang mbs = a->mbs; 51115091d37SBarry Smith ii = a->i; 51226e093fcSHong Zhang z = zarray; 51326e093fcSHong Zhang } 51415091d37SBarry Smith 51515091d37SBarry Smith for (i=0; i<mbs; i++) { 51615091d37SBarry Smith n = ii[1] - ii[0]; ii++; 51715091d37SBarry Smith sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; sum5 = 0.0; sum6 = 0.0; 51898c9bda7SSatish Balay nonzerorow += (n>0); 51915091d37SBarry Smith for (j=0; j<n; j++) { 52015091d37SBarry Smith xb = x + 6*(*idx++); 52115091d37SBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; 52215091d37SBarry Smith sum1 += v[0]*x1 + v[6]*x2 + v[12]*x3 + v[18]*x4 + v[24]*x5 + v[30]*x6; 52315091d37SBarry Smith sum2 += v[1]*x1 + v[7]*x2 + v[13]*x3 + v[19]*x4 + v[25]*x5 + v[31]*x6; 52415091d37SBarry Smith sum3 += v[2]*x1 + v[8]*x2 + v[14]*x3 + v[20]*x4 + v[26]*x5 + v[32]*x6; 52515091d37SBarry Smith sum4 += v[3]*x1 + v[9]*x2 + v[15]*x3 + v[21]*x4 + v[27]*x5 + v[33]*x6; 52615091d37SBarry Smith sum5 += v[4]*x1 + v[10]*x2 + v[16]*x3 + v[22]*x4 + v[28]*x5 + v[34]*x6; 52715091d37SBarry Smith sum6 += v[5]*x1 + v[11]*x2 + v[17]*x3 + v[23]*x4 + v[29]*x5 + v[35]*x6; 52815091d37SBarry Smith v += 36; 52915091d37SBarry Smith } 5307b2bb3b9SHong Zhang if (usecprow) z = zarray + 6*ridx[i]; 53115091d37SBarry Smith z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; 53226e093fcSHong Zhang if (!usecprow) z += 6; 53315091d37SBarry Smith } 53415091d37SBarry Smith 535d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 53626e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 537dc0b31edSSatish Balay ierr = PetscLogFlops(72.0*a->nz - 6.0*nonzerorow);CHKERRQ(ierr); 53815091d37SBarry Smith PetscFunctionReturn(0); 53915091d37SBarry Smith } 5404a2ae208SSatish Balay #undef __FUNCT__ 5414a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_7" 542dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_7(Mat A,Vec xx,Vec zz) 5432d61bbb3SSatish Balay { 5442d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 545d9fead3dSBarry Smith PetscScalar *z = 0,sum1,sum2,sum3,sum4,sum5,sum6,sum7; 546d9fead3dSBarry Smith const PetscScalar *x,*xb; 54726e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,x7,*zarray; 548d9fead3dSBarry Smith const MatScalar *v; 549dfbe8321SBarry Smith PetscErrorCode ierr; 55098c9bda7SSatish Balay PetscInt mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL,nonzerorow=0; 55126e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 5522d61bbb3SSatish Balay 553433994e6SBarry Smith PetscFunctionBegin; 554d9fead3dSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 55526e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 5562d61bbb3SSatish Balay 5572d61bbb3SSatish Balay idx = a->j; 5582d61bbb3SSatish Balay v = a->a; 55926e093fcSHong Zhang if (usecprow){ 56026e093fcSHong Zhang mbs = a->compressedrow.nrows; 56126e093fcSHong Zhang ii = a->compressedrow.i; 5627b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 56326e093fcSHong Zhang } else { 56426e093fcSHong Zhang mbs = a->mbs; 5652d61bbb3SSatish Balay ii = a->i; 56626e093fcSHong Zhang z = zarray; 56726e093fcSHong Zhang } 5682d61bbb3SSatish Balay 5692d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 5702d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 5712d61bbb3SSatish Balay sum1 = 0.0; sum2 = 0.0; sum3 = 0.0; sum4 = 0.0; sum5 = 0.0; sum6 = 0.0; sum7 = 0.0; 57298c9bda7SSatish Balay nonzerorow += (n>0); 5732d61bbb3SSatish Balay for (j=0; j<n; j++) { 5742d61bbb3SSatish Balay xb = x + 7*(*idx++); 5752d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; x7 = xb[6]; 5762d61bbb3SSatish Balay sum1 += v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4 + v[28]*x5 + v[35]*x6 + v[42]*x7; 5772d61bbb3SSatish Balay sum2 += v[1]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4 + v[29]*x5 + v[36]*x6 + v[43]*x7; 5782d61bbb3SSatish Balay sum3 += v[2]*x1 + v[9]*x2 + v[16]*x3 + v[23]*x4 + v[30]*x5 + v[37]*x6 + v[44]*x7; 5792d61bbb3SSatish Balay sum4 += v[3]*x1 + v[10]*x2 + v[17]*x3 + v[24]*x4 + v[31]*x5 + v[38]*x6 + v[45]*x7; 5802d61bbb3SSatish Balay sum5 += v[4]*x1 + v[11]*x2 + v[18]*x3 + v[25]*x4 + v[32]*x5 + v[39]*x6 + v[46]*x7; 5812d61bbb3SSatish Balay sum6 += v[5]*x1 + v[12]*x2 + v[19]*x3 + v[26]*x4 + v[33]*x5 + v[40]*x6 + v[47]*x7; 5822d61bbb3SSatish Balay sum7 += v[6]*x1 + v[13]*x2 + v[20]*x3 + v[27]*x4 + v[34]*x5 + v[41]*x6 + v[48]*x7; 5832d61bbb3SSatish Balay v += 49; 5842d61bbb3SSatish Balay } 5857b2bb3b9SHong Zhang if (usecprow) z = zarray + 7*ridx[i]; 5862d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; z[6] = sum7; 58726e093fcSHong Zhang if (!usecprow) z += 7; 5882d61bbb3SSatish Balay } 5892d61bbb3SSatish Balay 590d9fead3dSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 59126e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 592dc0b31edSSatish Balay ierr = PetscLogFlops(98.0*a->nz - 7.0*nonzerorow);CHKERRQ(ierr); 5932d61bbb3SSatish Balay PetscFunctionReturn(0); 5942d61bbb3SSatish Balay } 5952d61bbb3SSatish Balay 5963f1db9ecSBarry Smith /* 5973f1db9ecSBarry Smith This will not work with MatScalar == float because it calls the BLAS 5983f1db9ecSBarry Smith */ 5994a2ae208SSatish Balay #undef __FUNCT__ 6004a2ae208SSatish Balay #define __FUNCT__ "MatMult_SeqBAIJ_N" 601dfbe8321SBarry Smith PetscErrorCode MatMult_SeqBAIJ_N(Mat A,Vec xx,Vec zz) 6022d61bbb3SSatish Balay { 6032d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 604dcf5cc72SBarry Smith PetscScalar *x,*z = 0,*xb,*work,*workt,*zarray; 6053f1db9ecSBarry Smith MatScalar *v; 606dfbe8321SBarry Smith PetscErrorCode ierr; 607d0f46423SBarry Smith PetscInt mbs=a->mbs,i,*idx,*ii,bs=A->rmap->bs,j,n,bs2=a->bs2; 60898c9bda7SSatish Balay PetscInt ncols,k,*ridx=PETSC_NULL,nonzerorow=0; 60926e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 6102d61bbb3SSatish Balay 6112d61bbb3SSatish Balay PetscFunctionBegin; 6121ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 61326e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 6142d61bbb3SSatish Balay 6152d61bbb3SSatish Balay idx = a->j; 6162d61bbb3SSatish Balay v = a->a; 61726e093fcSHong Zhang if (usecprow){ 61826e093fcSHong Zhang mbs = a->compressedrow.nrows; 61926e093fcSHong Zhang ii = a->compressedrow.i; 6207b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 62126e093fcSHong Zhang } else { 62226e093fcSHong Zhang mbs = a->mbs; 6232d61bbb3SSatish Balay ii = a->i; 62426e093fcSHong Zhang z = zarray; 62526e093fcSHong Zhang } 626218c64b6SSatish Balay 6272d61bbb3SSatish Balay if (!a->mult_work) { 628d0f46423SBarry Smith k = PetscMax(A->rmap->n,A->cmap->n); 62987828ca2SBarry Smith ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 6302d61bbb3SSatish Balay } 6312d61bbb3SSatish Balay work = a->mult_work; 6322d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 6332d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 6342d61bbb3SSatish Balay ncols = n*bs; 6352d61bbb3SSatish Balay workt = work; 63698c9bda7SSatish Balay nonzerorow += (n>0); 6372d61bbb3SSatish Balay for (j=0; j<n; j++) { 6382d61bbb3SSatish Balay xb = x + bs*(*idx++); 6392d61bbb3SSatish Balay for (k=0; k<bs; k++) workt[k] = xb[k]; 6402d61bbb3SSatish Balay workt += bs; 6412d61bbb3SSatish Balay } 6427b2bb3b9SHong Zhang if (usecprow) z = zarray + bs*ridx[i]; 643737d121aSSatish Balay Kernel_w_gets_Ar_times_v(bs,ncols,work,v,z); 64471044d3cSBarry Smith /* BLASgemv_("N",&bs,&ncols,&_DOne,v,&bs,work,&_One,&_DZero,z,&_One); */ 6452d61bbb3SSatish Balay v += n*bs2; 64626e093fcSHong Zhang if (!usecprow) z += bs; 6472d61bbb3SSatish Balay } 6481ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 64926e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 650dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*a->nz*bs2 - bs*nonzerorow);CHKERRQ(ierr); 6512d61bbb3SSatish Balay PetscFunctionReturn(0); 6522d61bbb3SSatish Balay } 6532d61bbb3SSatish Balay 6546a65c766SHong Zhang extern PetscErrorCode VecCopy_Seq(Vec,Vec); 6554a2ae208SSatish Balay #undef __FUNCT__ 6564a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_1" 657dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_1(Mat A,Vec xx,Vec yy,Vec zz) 6582d61bbb3SSatish Balay { 6592d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 660122f12eaSBarry Smith const PetscScalar *x; 661122f12eaSBarry Smith PetscScalar *y,*z,sum; 662122f12eaSBarry Smith const MatScalar *v; 663dfbe8321SBarry Smith PetscErrorCode ierr; 664122f12eaSBarry Smith PetscInt mbs=a->mbs,i,n,*ridx=PETSC_NULL,nonzerorow=0; 665122f12eaSBarry Smith const PetscInt *idx,*ii; 66626e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 6672d61bbb3SSatish Balay 6682d61bbb3SSatish Balay PetscFunctionBegin; 669122f12eaSBarry Smith ierr = VecGetArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 670122f12eaSBarry Smith ierr = VecGetArray(yy,&y);CHKERRQ(ierr); 6712e8a6d31SBarry Smith if (zz != yy) { 672122f12eaSBarry Smith ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 6732e8a6d31SBarry Smith } else { 674122f12eaSBarry Smith z = y; 6752e8a6d31SBarry Smith } 6762d61bbb3SSatish Balay 6772d61bbb3SSatish Balay idx = a->j; 6782d61bbb3SSatish Balay v = a->a; 67926e093fcSHong Zhang if (usecprow){ 6804eb6d288SHong Zhang if (zz != yy){ 681122f12eaSBarry Smith ierr = PetscMemcpy(z,y,mbs*sizeof(PetscScalar));CHKERRQ(ierr); 6824eb6d288SHong Zhang } 68326e093fcSHong Zhang mbs = a->compressedrow.nrows; 68426e093fcSHong Zhang ii = a->compressedrow.i; 6857b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 68626e093fcSHong Zhang } else { 6872d61bbb3SSatish Balay ii = a->i; 68826e093fcSHong Zhang } 6892d61bbb3SSatish Balay 6902d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 691122f12eaSBarry Smith n = ii[1] - ii[0]; 692122f12eaSBarry Smith ii++; 69326e093fcSHong Zhang if (!usecprow){ 694122f12eaSBarry Smith nonzerorow += (n>0); 695122f12eaSBarry Smith sum = y[i]; 696122f12eaSBarry Smith } else { 697122f12eaSBarry Smith sum = y[ridx[i]]; 698122f12eaSBarry Smith } 699122f12eaSBarry Smith PetscSparseDensePlusDot(sum,x,v,idx,n); 700122f12eaSBarry Smith v += n; 701122f12eaSBarry Smith idx += n; 702122f12eaSBarry Smith if (usecprow){ 703122f12eaSBarry Smith z[ridx[i]] = sum; 704122f12eaSBarry Smith } else { 705122f12eaSBarry Smith z[i] = sum; 70626e093fcSHong Zhang } 7072d61bbb3SSatish Balay } 708122f12eaSBarry Smith ierr = VecRestoreArray(xx,(PetscScalar**)&x);CHKERRQ(ierr); 709122f12eaSBarry Smith ierr = VecRestoreArray(yy,&y);CHKERRQ(ierr); 7102e8a6d31SBarry Smith if (zz != yy) { 711122f12eaSBarry Smith ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 7122e8a6d31SBarry Smith } 713122f12eaSBarry Smith ierr = PetscLogFlops(2.0*a->nz - nonzerorow);CHKERRQ(ierr); 7142d61bbb3SSatish Balay PetscFunctionReturn(0); 7152d61bbb3SSatish Balay } 7162d61bbb3SSatish Balay 7174a2ae208SSatish Balay #undef __FUNCT__ 7184a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_2" 719dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_2(Mat A,Vec xx,Vec yy,Vec zz) 7202d61bbb3SSatish Balay { 7212d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 722dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2; 72326e093fcSHong Zhang PetscScalar x1,x2,*yarray,*zarray; 7243f1db9ecSBarry Smith MatScalar *v; 725dfbe8321SBarry Smith PetscErrorCode ierr; 7264eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 72726e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 7282d61bbb3SSatish Balay 7292d61bbb3SSatish Balay PetscFunctionBegin; 7301ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 73126e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 7322e8a6d31SBarry Smith if (zz != yy) { 73326e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 7342e8a6d31SBarry Smith } else { 73526e093fcSHong Zhang zarray = yarray; 7362e8a6d31SBarry Smith } 7372d61bbb3SSatish Balay 7382d61bbb3SSatish Balay idx = a->j; 7392d61bbb3SSatish Balay v = a->a; 74026e093fcSHong Zhang if (usecprow){ 7414eb6d288SHong Zhang if (zz != yy){ 7424eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,2*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 7434eb6d288SHong Zhang } 74426e093fcSHong Zhang mbs = a->compressedrow.nrows; 74526e093fcSHong Zhang ii = a->compressedrow.i; 7467b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 7474eb6d288SHong Zhang if (zz != yy){ 7484eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,a->mbs*sizeof(PetscScalar));CHKERRQ(ierr); 7494eb6d288SHong Zhang } 75026e093fcSHong Zhang } else { 7512d61bbb3SSatish Balay ii = a->i; 75226e093fcSHong Zhang y = yarray; 75326e093fcSHong Zhang z = zarray; 75426e093fcSHong Zhang } 7552d61bbb3SSatish Balay 7562d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 7572d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 75826e093fcSHong Zhang if (usecprow){ 7597b2bb3b9SHong Zhang z = zarray + 2*ridx[i]; 7607b2bb3b9SHong Zhang y = yarray + 2*ridx[i]; 76126e093fcSHong Zhang } 7622d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; 7632d61bbb3SSatish Balay for (j=0; j<n; j++) { 7642d61bbb3SSatish Balay xb = x + 2*(*idx++); x1 = xb[0]; x2 = xb[1]; 7652d61bbb3SSatish Balay sum1 += v[0]*x1 + v[2]*x2; 7662d61bbb3SSatish Balay sum2 += v[1]*x1 + v[3]*x2; 7672d61bbb3SSatish Balay v += 4; 7682d61bbb3SSatish Balay } 7692d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; 77026e093fcSHong Zhang if (!usecprow){ 7712d61bbb3SSatish Balay z += 2; y += 2; 7722d61bbb3SSatish Balay } 77326e093fcSHong Zhang } 7741ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 77526e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 7762e8a6d31SBarry Smith if (zz != yy) { 77726e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 7782e8a6d31SBarry Smith } 779dc0b31edSSatish Balay ierr = PetscLogFlops(4.0*a->nz);CHKERRQ(ierr); 7802d61bbb3SSatish Balay PetscFunctionReturn(0); 7812d61bbb3SSatish Balay } 7822d61bbb3SSatish Balay 7834a2ae208SSatish Balay #undef __FUNCT__ 7844a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_3" 785dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_3(Mat A,Vec xx,Vec yy,Vec zz) 7862d61bbb3SSatish Balay { 7872d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 788dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,x1,x2,x3,*yarray,*zarray; 7893f1db9ecSBarry Smith MatScalar *v; 790dfbe8321SBarry Smith PetscErrorCode ierr; 7914eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 79226e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 7932d61bbb3SSatish Balay 7942d61bbb3SSatish Balay PetscFunctionBegin; 7951ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 79626e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 7972e8a6d31SBarry Smith if (zz != yy) { 79826e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 7992e8a6d31SBarry Smith } else { 80026e093fcSHong Zhang zarray = yarray; 8012e8a6d31SBarry Smith } 8022d61bbb3SSatish Balay 8032d61bbb3SSatish Balay idx = a->j; 8042d61bbb3SSatish Balay v = a->a; 80526e093fcSHong Zhang if (usecprow){ 8064eb6d288SHong Zhang if (zz != yy){ 8074eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,3*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 8084eb6d288SHong Zhang } 80926e093fcSHong Zhang mbs = a->compressedrow.nrows; 81026e093fcSHong Zhang ii = a->compressedrow.i; 8117b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 81226e093fcSHong Zhang } else { 8132d61bbb3SSatish Balay ii = a->i; 81426e093fcSHong Zhang y = yarray; 81526e093fcSHong Zhang z = zarray; 81626e093fcSHong Zhang } 8172d61bbb3SSatish Balay 8182d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 8192d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 82026e093fcSHong Zhang if (usecprow){ 8217b2bb3b9SHong Zhang z = zarray + 3*ridx[i]; 8227b2bb3b9SHong Zhang y = yarray + 3*ridx[i]; 82326e093fcSHong Zhang } 8242d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; 8252d61bbb3SSatish Balay for (j=0; j<n; j++) { 8262d61bbb3SSatish Balay xb = x + 3*(*idx++); x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 8272d61bbb3SSatish Balay sum1 += v[0]*x1 + v[3]*x2 + v[6]*x3; 8282d61bbb3SSatish Balay sum2 += v[1]*x1 + v[4]*x2 + v[7]*x3; 8292d61bbb3SSatish Balay sum3 += v[2]*x1 + v[5]*x2 + v[8]*x3; 8302d61bbb3SSatish Balay v += 9; 8312d61bbb3SSatish Balay } 8322d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; 83326e093fcSHong Zhang if (!usecprow){ 8342d61bbb3SSatish Balay z += 3; y += 3; 8352d61bbb3SSatish Balay } 83626e093fcSHong Zhang } 8371ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 83826e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 8392e8a6d31SBarry Smith if (zz != yy) { 84026e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 8412e8a6d31SBarry Smith } 842dc0b31edSSatish Balay ierr = PetscLogFlops(18.0*a->nz);CHKERRQ(ierr); 8432d61bbb3SSatish Balay PetscFunctionReturn(0); 8442d61bbb3SSatish Balay } 8452d61bbb3SSatish Balay 8464a2ae208SSatish Balay #undef __FUNCT__ 8474a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_4" 848dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_4(Mat A,Vec xx,Vec yy,Vec zz) 8492d61bbb3SSatish Balay { 8502d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 851dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,x1,x2,x3,x4,*yarray,*zarray; 8523f1db9ecSBarry Smith MatScalar *v; 853dfbe8321SBarry Smith PetscErrorCode ierr; 8544eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 85526e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 8562d61bbb3SSatish Balay 8572d61bbb3SSatish Balay PetscFunctionBegin; 8581ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 85926e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 8602e8a6d31SBarry Smith if (zz != yy) { 86126e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 8622e8a6d31SBarry Smith } else { 86326e093fcSHong Zhang zarray = yarray; 8642e8a6d31SBarry Smith } 8652d61bbb3SSatish Balay 8662d61bbb3SSatish Balay idx = a->j; 8672d61bbb3SSatish Balay v = a->a; 86826e093fcSHong Zhang if (usecprow){ 8694eb6d288SHong Zhang if (zz != yy){ 8704eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,4*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 8714eb6d288SHong Zhang } 87226e093fcSHong Zhang mbs = a->compressedrow.nrows; 87326e093fcSHong Zhang ii = a->compressedrow.i; 8747b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 87526e093fcSHong Zhang } else { 8762d61bbb3SSatish Balay ii = a->i; 87726e093fcSHong Zhang y = yarray; 87826e093fcSHong Zhang z = zarray; 87926e093fcSHong Zhang } 8802d61bbb3SSatish Balay 8812d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 8822d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 88326e093fcSHong Zhang if (usecprow){ 8847b2bb3b9SHong Zhang z = zarray + 4*ridx[i]; 8857b2bb3b9SHong Zhang y = yarray + 4*ridx[i]; 88626e093fcSHong Zhang } 8872d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; 8882d61bbb3SSatish Balay for (j=0; j<n; j++) { 8892d61bbb3SSatish Balay xb = x + 4*(*idx++); 8902d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 8912d61bbb3SSatish Balay sum1 += v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 8922d61bbb3SSatish Balay sum2 += v[1]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 8932d61bbb3SSatish Balay sum3 += v[2]*x1 + v[6]*x2 + v[10]*x3 + v[14]*x4; 8942d61bbb3SSatish Balay sum4 += v[3]*x1 + v[7]*x2 + v[11]*x3 + v[15]*x4; 8952d61bbb3SSatish Balay v += 16; 8962d61bbb3SSatish Balay } 8972d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; 89826e093fcSHong Zhang if (!usecprow){ 8992d61bbb3SSatish Balay z += 4; y += 4; 9002d61bbb3SSatish Balay } 90126e093fcSHong Zhang } 9021ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 90326e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 9042e8a6d31SBarry Smith if (zz != yy) { 90526e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 9062e8a6d31SBarry Smith } 907dc0b31edSSatish Balay ierr = PetscLogFlops(32.0*a->nz);CHKERRQ(ierr); 9082d61bbb3SSatish Balay PetscFunctionReturn(0); 9092d61bbb3SSatish Balay } 9102d61bbb3SSatish Balay 9114a2ae208SSatish Balay #undef __FUNCT__ 9124a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_5" 913dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_5(Mat A,Vec xx,Vec yy,Vec zz) 9142d61bbb3SSatish Balay { 9152d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 916dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,x1,x2,x3,x4,x5; 91726e093fcSHong Zhang PetscScalar *yarray,*zarray; 9183f1db9ecSBarry Smith MatScalar *v; 919dfbe8321SBarry Smith PetscErrorCode ierr; 9204eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 92126e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 9222d61bbb3SSatish Balay 9232d61bbb3SSatish Balay PetscFunctionBegin; 9241ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 92526e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 9262e8a6d31SBarry Smith if (zz != yy) { 92726e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 9282e8a6d31SBarry Smith } else { 92926e093fcSHong Zhang zarray = yarray; 9302e8a6d31SBarry Smith } 9312d61bbb3SSatish Balay 9322d61bbb3SSatish Balay idx = a->j; 9332d61bbb3SSatish Balay v = a->a; 93426e093fcSHong Zhang if (usecprow){ 9354eb6d288SHong Zhang if (zz != yy){ 9364eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,5*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 9374eb6d288SHong Zhang } 93826e093fcSHong Zhang mbs = a->compressedrow.nrows; 93926e093fcSHong Zhang ii = a->compressedrow.i; 9407b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 94126e093fcSHong Zhang } else { 9422d61bbb3SSatish Balay ii = a->i; 94326e093fcSHong Zhang y = yarray; 94426e093fcSHong Zhang z = zarray; 94526e093fcSHong Zhang } 9462d61bbb3SSatish Balay 9472d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 9482d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 94926e093fcSHong Zhang if (usecprow){ 9507b2bb3b9SHong Zhang z = zarray + 5*ridx[i]; 9517b2bb3b9SHong Zhang y = yarray + 5*ridx[i]; 95226e093fcSHong Zhang } 9532d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; sum5 = y[4]; 9542d61bbb3SSatish Balay for (j=0; j<n; j++) { 9552d61bbb3SSatish Balay xb = x + 5*(*idx++); 9562d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; 9572d61bbb3SSatish Balay sum1 += v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4 + v[20]*x5; 9582d61bbb3SSatish Balay sum2 += v[1]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4 + v[21]*x5; 9592d61bbb3SSatish Balay sum3 += v[2]*x1 + v[7]*x2 + v[12]*x3 + v[17]*x4 + v[22]*x5; 9602d61bbb3SSatish Balay sum4 += v[3]*x1 + v[8]*x2 + v[13]*x3 + v[18]*x4 + v[23]*x5; 9612d61bbb3SSatish Balay sum5 += v[4]*x1 + v[9]*x2 + v[14]*x3 + v[19]*x4 + v[24]*x5; 9622d61bbb3SSatish Balay v += 25; 9632d61bbb3SSatish Balay } 9642d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; 96526e093fcSHong Zhang if (!usecprow){ 9662d61bbb3SSatish Balay z += 5; y += 5; 9672d61bbb3SSatish Balay } 96826e093fcSHong Zhang } 9691ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 97026e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 9712e8a6d31SBarry Smith if (zz != yy) { 97226e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 9732e8a6d31SBarry Smith } 974dc0b31edSSatish Balay ierr = PetscLogFlops(50.0*a->nz);CHKERRQ(ierr); 9752d61bbb3SSatish Balay PetscFunctionReturn(0); 9762d61bbb3SSatish Balay } 9774a2ae208SSatish Balay #undef __FUNCT__ 9784a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_6" 979dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_6(Mat A,Vec xx,Vec yy,Vec zz) 98015091d37SBarry Smith { 98115091d37SBarry Smith Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 982dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,sum6; 98326e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,*yarray,*zarray; 98415091d37SBarry Smith MatScalar *v; 985dfbe8321SBarry Smith PetscErrorCode ierr; 9864eb6d288SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 98726e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 98815091d37SBarry Smith 98915091d37SBarry Smith PetscFunctionBegin; 9901ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 99126e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 99215091d37SBarry Smith if (zz != yy) { 99326e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 99415091d37SBarry Smith } else { 99526e093fcSHong Zhang zarray = yarray; 99615091d37SBarry Smith } 99715091d37SBarry Smith 99815091d37SBarry Smith idx = a->j; 99915091d37SBarry Smith v = a->a; 100026e093fcSHong Zhang if (usecprow){ 10014eb6d288SHong Zhang if (zz != yy){ 10024eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,6*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 10034eb6d288SHong Zhang } 100426e093fcSHong Zhang mbs = a->compressedrow.nrows; 100526e093fcSHong Zhang ii = a->compressedrow.i; 10067b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 100726e093fcSHong Zhang } else { 100815091d37SBarry Smith ii = a->i; 100926e093fcSHong Zhang y = yarray; 101026e093fcSHong Zhang z = zarray; 101126e093fcSHong Zhang } 101215091d37SBarry Smith 101315091d37SBarry Smith for (i=0; i<mbs; i++) { 101415091d37SBarry Smith n = ii[1] - ii[0]; ii++; 101526e093fcSHong Zhang if (usecprow){ 10167b2bb3b9SHong Zhang z = zarray + 6*ridx[i]; 10177b2bb3b9SHong Zhang y = yarray + 6*ridx[i]; 101826e093fcSHong Zhang } 101915091d37SBarry Smith sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; sum5 = y[4]; sum6 = y[5]; 102015091d37SBarry Smith for (j=0; j<n; j++) { 10213b95cb0eSSatish Balay xb = x + 6*(*idx++); 102215091d37SBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; 102315091d37SBarry Smith sum1 += v[0]*x1 + v[6]*x2 + v[12]*x3 + v[18]*x4 + v[24]*x5 + v[30]*x6; 102415091d37SBarry Smith sum2 += v[1]*x1 + v[7]*x2 + v[13]*x3 + v[19]*x4 + v[25]*x5 + v[31]*x6; 102515091d37SBarry Smith sum3 += v[2]*x1 + v[8]*x2 + v[14]*x3 + v[20]*x4 + v[26]*x5 + v[32]*x6; 102615091d37SBarry Smith sum4 += v[3]*x1 + v[9]*x2 + v[15]*x3 + v[21]*x4 + v[27]*x5 + v[33]*x6; 102715091d37SBarry Smith sum5 += v[4]*x1 + v[10]*x2 + v[16]*x3 + v[22]*x4 + v[28]*x5 + v[34]*x6; 102815091d37SBarry Smith sum6 += v[5]*x1 + v[11]*x2 + v[17]*x3 + v[23]*x4 + v[29]*x5 + v[35]*x6; 102915091d37SBarry Smith v += 36; 103015091d37SBarry Smith } 103115091d37SBarry Smith z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; 103226e093fcSHong Zhang if (!usecprow){ 103315091d37SBarry Smith z += 6; y += 6; 103415091d37SBarry Smith } 103526e093fcSHong Zhang } 10361ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 103726e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 103815091d37SBarry Smith if (zz != yy) { 103926e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 104015091d37SBarry Smith } 1041dc0b31edSSatish Balay ierr = PetscLogFlops(72.0*a->nz);CHKERRQ(ierr); 104215091d37SBarry Smith PetscFunctionReturn(0); 104315091d37SBarry Smith } 10442d61bbb3SSatish Balay 10454a2ae208SSatish Balay #undef __FUNCT__ 10464a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_7" 1047dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_7(Mat A,Vec xx,Vec yy,Vec zz) 10482d61bbb3SSatish Balay { 10492d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1050dcf5cc72SBarry Smith PetscScalar *x,*y = 0,*z = 0,*xb,sum1,sum2,sum3,sum4,sum5,sum6,sum7; 105126e093fcSHong Zhang PetscScalar x1,x2,x3,x4,x5,x6,x7,*yarray,*zarray; 10523f1db9ecSBarry Smith MatScalar *v; 1053dfbe8321SBarry Smith PetscErrorCode ierr; 10547b2bb3b9SHong Zhang PetscInt mbs=a->mbs,i,*idx,*ii,j,n,*ridx=PETSC_NULL; 105526e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 10562d61bbb3SSatish Balay 10572d61bbb3SSatish Balay PetscFunctionBegin; 10581ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 105926e093fcSHong Zhang ierr = VecGetArray(yy,&yarray);CHKERRQ(ierr); 10602e8a6d31SBarry Smith if (zz != yy) { 106126e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 10622e8a6d31SBarry Smith } else { 106326e093fcSHong Zhang zarray = yarray; 10642e8a6d31SBarry Smith } 10652d61bbb3SSatish Balay 10662d61bbb3SSatish Balay idx = a->j; 10672d61bbb3SSatish Balay v = a->a; 106826e093fcSHong Zhang if (usecprow){ 10694eb6d288SHong Zhang if (zz != yy){ 10704eb6d288SHong Zhang ierr = PetscMemcpy(zarray,yarray,7*mbs*sizeof(PetscScalar));CHKERRQ(ierr); 10714eb6d288SHong Zhang } 107226e093fcSHong Zhang mbs = a->compressedrow.nrows; 107326e093fcSHong Zhang ii = a->compressedrow.i; 10747b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 107526e093fcSHong Zhang } else { 10762d61bbb3SSatish Balay ii = a->i; 107726e093fcSHong Zhang y = yarray; 107826e093fcSHong Zhang z = zarray; 107926e093fcSHong Zhang } 10802d61bbb3SSatish Balay 10812d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 10822d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 108326e093fcSHong Zhang if (usecprow){ 10847b2bb3b9SHong Zhang z = zarray + 7*ridx[i]; 10857b2bb3b9SHong Zhang y = yarray + 7*ridx[i]; 108626e093fcSHong Zhang } 10872d61bbb3SSatish Balay sum1 = y[0]; sum2 = y[1]; sum3 = y[2]; sum4 = y[3]; sum5 = y[4]; sum6 = y[5]; sum7 = y[6]; 10882d61bbb3SSatish Balay for (j=0; j<n; j++) { 10892d61bbb3SSatish Balay xb = x + 7*(*idx++); 10902d61bbb3SSatish Balay x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; x5 = xb[4]; x6 = xb[5]; x7 = xb[6]; 10912d61bbb3SSatish Balay sum1 += v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4 + v[28]*x5 + v[35]*x6 + v[42]*x7; 10922d61bbb3SSatish Balay sum2 += v[1]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4 + v[29]*x5 + v[36]*x6 + v[43]*x7; 10932d61bbb3SSatish Balay sum3 += v[2]*x1 + v[9]*x2 + v[16]*x3 + v[23]*x4 + v[30]*x5 + v[37]*x6 + v[44]*x7; 10942d61bbb3SSatish Balay sum4 += v[3]*x1 + v[10]*x2 + v[17]*x3 + v[24]*x4 + v[31]*x5 + v[38]*x6 + v[45]*x7; 10952d61bbb3SSatish Balay sum5 += v[4]*x1 + v[11]*x2 + v[18]*x3 + v[25]*x4 + v[32]*x5 + v[39]*x6 + v[46]*x7; 10962d61bbb3SSatish Balay sum6 += v[5]*x1 + v[12]*x2 + v[19]*x3 + v[26]*x4 + v[33]*x5 + v[40]*x6 + v[47]*x7; 10972d61bbb3SSatish Balay sum7 += v[6]*x1 + v[13]*x2 + v[20]*x3 + v[27]*x4 + v[34]*x5 + v[41]*x6 + v[48]*x7; 10982d61bbb3SSatish Balay v += 49; 10992d61bbb3SSatish Balay } 11002d61bbb3SSatish Balay z[0] = sum1; z[1] = sum2; z[2] = sum3; z[3] = sum4; z[4] = sum5; z[5] = sum6; z[6] = sum7; 110126e093fcSHong Zhang if (!usecprow){ 11022d61bbb3SSatish Balay z += 7; y += 7; 11032d61bbb3SSatish Balay } 110426e093fcSHong Zhang } 11051ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 110626e093fcSHong Zhang ierr = VecRestoreArray(yy,&yarray);CHKERRQ(ierr); 11072e8a6d31SBarry Smith if (zz != yy) { 110826e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 11092e8a6d31SBarry Smith } 1110dc0b31edSSatish Balay ierr = PetscLogFlops(98.0*a->nz);CHKERRQ(ierr); 11112d61bbb3SSatish Balay PetscFunctionReturn(0); 11122d61bbb3SSatish Balay } 1113218c64b6SSatish Balay 11144a2ae208SSatish Balay #undef __FUNCT__ 11154a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_SeqBAIJ_N" 1116dfbe8321SBarry Smith PetscErrorCode MatMultAdd_SeqBAIJ_N(Mat A,Vec xx,Vec yy,Vec zz) 11172d61bbb3SSatish Balay { 11182d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1119bba805e6SBarry Smith PetscScalar *x,*z = 0,*xb,*work,*workt,*zarray; 11203f1db9ecSBarry Smith MatScalar *v; 11216849ba73SBarry Smith PetscErrorCode ierr; 1122d0f46423SBarry Smith PetscInt mbs,i,*idx,*ii,bs=A->rmap->bs,j,n,bs2=a->bs2; 11237b2bb3b9SHong Zhang PetscInt ncols,k,*ridx=PETSC_NULL; 112426e093fcSHong Zhang PetscTruth usecprow=a->compressedrow.use; 1125218c64b6SSatish Balay 11262d61bbb3SSatish Balay PetscFunctionBegin; 11276a65c766SHong Zhang ierr = VecCopy_Seq(yy,zz);CHKERRQ(ierr); 11281ebc52fbSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 112926e093fcSHong Zhang ierr = VecGetArray(zz,&zarray);CHKERRQ(ierr); 11302d61bbb3SSatish Balay 11312d61bbb3SSatish Balay idx = a->j; 11322d61bbb3SSatish Balay v = a->a; 113326e093fcSHong Zhang if (usecprow){ 113426e093fcSHong Zhang mbs = a->compressedrow.nrows; 113526e093fcSHong Zhang ii = a->compressedrow.i; 11367b2bb3b9SHong Zhang ridx = a->compressedrow.rindex; 113726e093fcSHong Zhang } else { 113826e093fcSHong Zhang mbs = a->mbs; 11392d61bbb3SSatish Balay ii = a->i; 114026e093fcSHong Zhang z = zarray; 114126e093fcSHong Zhang } 11422d61bbb3SSatish Balay 11432d61bbb3SSatish Balay if (!a->mult_work) { 1144d0f46423SBarry Smith k = PetscMax(A->rmap->n,A->cmap->n); 114587828ca2SBarry Smith ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 11462d61bbb3SSatish Balay } 11472d61bbb3SSatish Balay work = a->mult_work; 11482d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 11492d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 11502d61bbb3SSatish Balay ncols = n*bs; 11512d61bbb3SSatish Balay workt = work; 11522d61bbb3SSatish Balay for (j=0; j<n; j++) { 11532d61bbb3SSatish Balay xb = x + bs*(*idx++); 11542d61bbb3SSatish Balay for (k=0; k<bs; k++) workt[k] = xb[k]; 11552d61bbb3SSatish Balay workt += bs; 11562d61bbb3SSatish Balay } 11577b2bb3b9SHong Zhang if (usecprow) z = zarray + bs*ridx[i]; 11583f1db9ecSBarry Smith Kernel_w_gets_w_plus_Ar_times_v(bs,ncols,work,v,z); 115971044d3cSBarry Smith /* BLASgemv_("N",&bs,&ncols,&_DOne,v,&bs,work,&_One,&_DOne,z,&_One); */ 11602d61bbb3SSatish Balay v += n*bs2; 116126e093fcSHong Zhang if (!usecprow){ 11622d61bbb3SSatish Balay z += bs; 11632d61bbb3SSatish Balay } 116426e093fcSHong Zhang } 11651ebc52fbSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 116626e093fcSHong Zhang ierr = VecRestoreArray(zz,&zarray);CHKERRQ(ierr); 1167dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*a->nz*bs2);CHKERRQ(ierr); 11682d61bbb3SSatish Balay PetscFunctionReturn(0); 11692d61bbb3SSatish Balay } 11702d61bbb3SSatish Balay 11714a2ae208SSatish Balay #undef __FUNCT__ 1172547795f9SHong Zhang #define __FUNCT__ "MatMultHermitianTranspose_SeqBAIJ" 1173547795f9SHong Zhang PetscErrorCode MatMultHermitianTranspose_SeqBAIJ(Mat A,Vec xx,Vec zz) 1174547795f9SHong Zhang { 1175547795f9SHong Zhang PetscScalar zero = 0.0; 1176547795f9SHong Zhang PetscErrorCode ierr; 1177547795f9SHong Zhang 1178547795f9SHong Zhang PetscFunctionBegin; 1179547795f9SHong Zhang ierr = VecSet(zz,zero);CHKERRQ(ierr); 1180547795f9SHong Zhang ierr = MatMultHermitianTransposeAdd_SeqBAIJ(A,xx,zz,zz);CHKERRQ(ierr); 1181547795f9SHong Zhang PetscFunctionReturn(0); 1182547795f9SHong Zhang } 1183547795f9SHong Zhang 1184547795f9SHong Zhang #undef __FUNCT__ 11854a2ae208SSatish Balay #define __FUNCT__ "MatMultTranspose_SeqBAIJ" 1186dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_SeqBAIJ(Mat A,Vec xx,Vec zz) 11872d61bbb3SSatish Balay { 11883447b6efSHong Zhang PetscScalar zero = 0.0; 11896849ba73SBarry Smith PetscErrorCode ierr; 11902d61bbb3SSatish Balay 11912d61bbb3SSatish Balay PetscFunctionBegin; 11922dcb1b2aSMatthew Knepley ierr = VecSet(zz,zero);CHKERRQ(ierr); 11933447b6efSHong Zhang ierr = MatMultTransposeAdd_SeqBAIJ(A,xx,zz,zz);CHKERRQ(ierr); 11942d61bbb3SSatish Balay PetscFunctionReturn(0); 11952d61bbb3SSatish Balay } 11962d61bbb3SSatish Balay 11974a2ae208SSatish Balay #undef __FUNCT__ 1198547795f9SHong Zhang #define __FUNCT__ "MatMultHermitianTransposeAdd_SeqBAIJ" 1199547795f9SHong Zhang PetscErrorCode MatMultHermitianTransposeAdd_SeqBAIJ(Mat A,Vec xx,Vec yy,Vec zz) 1200547795f9SHong Zhang 1201547795f9SHong Zhang { 1202547795f9SHong Zhang Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1203547795f9SHong Zhang PetscScalar *zb,*x,*z,*xb = 0,x1,x2,x3,x4,x5; 1204547795f9SHong Zhang MatScalar *v; 1205547795f9SHong Zhang PetscErrorCode ierr; 1206547795f9SHong Zhang PetscInt mbs,i,*idx,*ii,rval,bs=A->rmap->bs,j,n,bs2=a->bs2,*ib,*ridx=PETSC_NULL; 1207547795f9SHong Zhang Mat_CompressedRow cprow = a->compressedrow; 1208547795f9SHong Zhang PetscTruth usecprow=cprow.use; 1209547795f9SHong Zhang 1210547795f9SHong Zhang PetscFunctionBegin; 1211547795f9SHong Zhang if (yy != zz) { ierr = VecCopy_Seq(yy,zz);CHKERRQ(ierr); } 1212547795f9SHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 1213547795f9SHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 1214547795f9SHong Zhang 1215547795f9SHong Zhang idx = a->j; 1216547795f9SHong Zhang v = a->a; 1217547795f9SHong Zhang if (usecprow){ 1218547795f9SHong Zhang mbs = cprow.nrows; 1219547795f9SHong Zhang ii = cprow.i; 1220547795f9SHong Zhang ridx = cprow.rindex; 1221547795f9SHong Zhang } else { 1222547795f9SHong Zhang mbs=a->mbs; 1223547795f9SHong Zhang ii = a->i; 1224547795f9SHong Zhang xb = x; 1225547795f9SHong Zhang } 1226547795f9SHong Zhang 1227547795f9SHong Zhang switch (bs) { 1228547795f9SHong Zhang case 1: 1229547795f9SHong Zhang for (i=0; i<mbs; i++) { 1230547795f9SHong Zhang if (usecprow) xb = x + ridx[i]; 1231547795f9SHong Zhang x1 = xb[0]; 1232547795f9SHong Zhang ib = idx + ii[0]; 1233547795f9SHong Zhang n = ii[1] - ii[0]; ii++; 1234547795f9SHong Zhang for (j=0; j<n; j++) { 1235547795f9SHong Zhang rval = ib[j]; 1236547795f9SHong Zhang z[rval] += PetscConj(*v) * x1; 1237547795f9SHong Zhang v++; 1238547795f9SHong Zhang } 1239547795f9SHong Zhang if (!usecprow) xb++; 1240547795f9SHong Zhang } 1241547795f9SHong Zhang break; 1242547795f9SHong Zhang case 2: 1243547795f9SHong Zhang for (i=0; i<mbs; i++) { 1244547795f9SHong Zhang if (usecprow) xb = x + 2*ridx[i]; 1245547795f9SHong Zhang x1 = xb[0]; x2 = xb[1]; 1246547795f9SHong Zhang ib = idx + ii[0]; 1247547795f9SHong Zhang n = ii[1] - ii[0]; ii++; 1248547795f9SHong Zhang for (j=0; j<n; j++) { 1249547795f9SHong Zhang rval = ib[j]*2; 1250547795f9SHong Zhang z[rval++] += PetscConj(v[0])*x1 + PetscConj(v[1])*x2; 1251547795f9SHong Zhang z[rval++] += PetscConj(v[2])*x1 + PetscConj(v[3])*x2; 1252547795f9SHong Zhang v += 4; 1253547795f9SHong Zhang } 1254547795f9SHong Zhang if (!usecprow) xb += 2; 1255547795f9SHong Zhang } 1256547795f9SHong Zhang break; 1257547795f9SHong Zhang case 3: 1258547795f9SHong Zhang for (i=0; i<mbs; i++) { 1259547795f9SHong Zhang if (usecprow) xb = x + 3*ridx[i]; 1260547795f9SHong Zhang x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 1261547795f9SHong Zhang ib = idx + ii[0]; 1262547795f9SHong Zhang n = ii[1] - ii[0]; ii++; 1263547795f9SHong Zhang for (j=0; j<n; j++) { 1264547795f9SHong Zhang rval = ib[j]*3; 1265547795f9SHong Zhang z[rval++] += PetscConj(v[0])*x1 + PetscConj(v[1])*x2 + PetscConj(v[2])*x3; 1266547795f9SHong Zhang z[rval++] += PetscConj(v[3])*x1 + PetscConj(v[4])*x2 + PetscConj(v[5])*x3; 1267547795f9SHong Zhang z[rval++] += PetscConj(v[6])*x1 + PetscConj(v[7])*x2 + PetscConj(v[8])*x3; 1268547795f9SHong Zhang v += 9; 1269547795f9SHong Zhang } 1270547795f9SHong Zhang if (!usecprow) xb += 3; 1271547795f9SHong Zhang } 1272547795f9SHong Zhang break; 1273547795f9SHong Zhang case 4: 1274547795f9SHong Zhang for (i=0; i<mbs; i++) { 1275547795f9SHong Zhang if (usecprow) xb = x + 4*ridx[i]; 1276547795f9SHong Zhang x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 1277547795f9SHong Zhang ib = idx + ii[0]; 1278547795f9SHong Zhang n = ii[1] - ii[0]; ii++; 1279547795f9SHong Zhang for (j=0; j<n; j++) { 1280547795f9SHong Zhang rval = ib[j]*4; 1281547795f9SHong Zhang z[rval++] += PetscConj(v[0])*x1 + PetscConj(v[1])*x2 + PetscConj(v[2])*x3 + PetscConj(v[3])*x4; 1282547795f9SHong Zhang z[rval++] += PetscConj(v[4])*x1 + PetscConj(v[5])*x2 + PetscConj(v[6])*x3 + PetscConj(v[7])*x4; 1283547795f9SHong Zhang z[rval++] += PetscConj(v[8])*x1 + PetscConj(v[9])*x2 + PetscConj(v[10])*x3 + PetscConj(v[11])*x4; 1284547795f9SHong Zhang z[rval++] += PetscConj(v[12])*x1 + PetscConj(v[13])*x2 + PetscConj(v[14])*x3 + PetscConj(v[15])*x4; 1285547795f9SHong Zhang v += 16; 1286547795f9SHong Zhang } 1287547795f9SHong Zhang if (!usecprow) xb += 4; 1288547795f9SHong Zhang } 1289547795f9SHong Zhang break; 1290547795f9SHong Zhang case 5: 1291547795f9SHong Zhang for (i=0; i<mbs; i++) { 1292547795f9SHong Zhang if (usecprow) xb = x + 5*ridx[i]; 1293547795f9SHong Zhang x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 1294547795f9SHong Zhang x4 = xb[3]; x5 = xb[4]; 1295547795f9SHong Zhang ib = idx + ii[0]; 1296547795f9SHong Zhang n = ii[1] - ii[0]; ii++; 1297547795f9SHong Zhang for (j=0; j<n; j++) { 1298547795f9SHong Zhang rval = ib[j]*5; 1299547795f9SHong Zhang z[rval++] += PetscConj(v[0])*x1 + PetscConj(v[1])*x2 + PetscConj(v[2])*x3 + PetscConj(v[3])*x4 + PetscConj(v[4])*x5; 1300547795f9SHong Zhang z[rval++] += PetscConj(v[5])*x1 + PetscConj(v[6])*x2 + PetscConj(v[7])*x3 + PetscConj(v[8])*x4 + PetscConj(v[9])*x5; 1301547795f9SHong Zhang z[rval++] += PetscConj(v[10])*x1 + PetscConj(v[11])*x2 + PetscConj(v[12])*x3 + PetscConj(v[13])*x4 + PetscConj(v[14])*x5; 1302547795f9SHong Zhang z[rval++] += PetscConj(v[15])*x1 + PetscConj(v[16])*x2 + PetscConj(v[17])*x3 + PetscConj(v[18])*x4 + PetscConj(v[19])*x5; 1303547795f9SHong Zhang z[rval++] += PetscConj(v[20])*x1 + PetscConj(v[21])*x2 + PetscConj(v[22])*x3 + PetscConj(v[23])*x4 + PetscConj(v[24])*x5; 1304547795f9SHong Zhang v += 25; 1305547795f9SHong Zhang } 1306547795f9SHong Zhang if (!usecprow) xb += 5; 1307547795f9SHong Zhang } 1308547795f9SHong Zhang break; 1309547795f9SHong Zhang default: { /* block sizes larger than 5 by 5 are handled by BLAS */ 1310547795f9SHong Zhang PetscInt ncols,k; 1311547795f9SHong Zhang PetscScalar *work,*workt,*xtmp; 1312547795f9SHong Zhang 1313547795f9SHong Zhang SETERRQ(PETSC_ERR_SUP,"block size larger than 5 is not supported yet"); 1314547795f9SHong Zhang if (!a->mult_work) { 1315547795f9SHong Zhang k = PetscMax(A->rmap->n,A->cmap->n); 1316547795f9SHong Zhang ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 1317547795f9SHong Zhang } 1318547795f9SHong Zhang work = a->mult_work; 1319547795f9SHong Zhang xtmp = x; 1320547795f9SHong Zhang for (i=0; i<mbs; i++) { 1321547795f9SHong Zhang n = ii[1] - ii[0]; ii++; 1322547795f9SHong Zhang ncols = n*bs; 1323547795f9SHong Zhang ierr = PetscMemzero(work,ncols*sizeof(PetscScalar));CHKERRQ(ierr); 1324547795f9SHong Zhang if (usecprow) { 1325547795f9SHong Zhang xtmp = x + bs*ridx[i]; 1326547795f9SHong Zhang } 1327547795f9SHong Zhang Kernel_w_gets_w_plus_trans_Ar_times_v(bs,ncols,xtmp,v,work); 1328547795f9SHong Zhang /* BLASgemv_("T",&bs,&ncols,&_DOne,v,&bs,xtmp,&_One,&_DOne,work,&_One); */ 1329547795f9SHong Zhang v += n*bs2; 1330547795f9SHong Zhang if (!usecprow) xtmp += bs; 1331547795f9SHong Zhang workt = work; 1332547795f9SHong Zhang for (j=0; j<n; j++) { 1333547795f9SHong Zhang zb = z + bs*(*idx++); 1334547795f9SHong Zhang for (k=0; k<bs; k++) zb[k] += workt[k] ; 1335547795f9SHong Zhang workt += bs; 1336547795f9SHong Zhang } 1337547795f9SHong Zhang } 1338547795f9SHong Zhang } 1339547795f9SHong Zhang } 1340547795f9SHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 1341547795f9SHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 1342547795f9SHong Zhang ierr = PetscLogFlops(2.0*a->nz*a->bs2);CHKERRQ(ierr); 1343547795f9SHong Zhang PetscFunctionReturn(0); 1344547795f9SHong Zhang } 1345547795f9SHong Zhang 1346547795f9SHong Zhang #undef __FUNCT__ 13474a2ae208SSatish Balay #define __FUNCT__ "MatMultTransposeAdd_SeqBAIJ" 1348dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_SeqBAIJ(Mat A,Vec xx,Vec yy,Vec zz) 13492d61bbb3SSatish Balay 13502d61bbb3SSatish Balay { 13512d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1352dcf5cc72SBarry Smith PetscScalar *zb,*x,*z,*xb = 0,x1,x2,x3,x4,x5; 13533f1db9ecSBarry Smith MatScalar *v; 13546849ba73SBarry Smith PetscErrorCode ierr; 1355d0f46423SBarry Smith PetscInt mbs,i,*idx,*ii,rval,bs=A->rmap->bs,j,n,bs2=a->bs2,*ib,*ridx=PETSC_NULL; 13563447b6efSHong Zhang Mat_CompressedRow cprow = a->compressedrow; 13573447b6efSHong Zhang PetscTruth usecprow=cprow.use; 13582d61bbb3SSatish Balay 13592d61bbb3SSatish Balay PetscFunctionBegin; 13606a65c766SHong Zhang if (yy != zz) { ierr = VecCopy_Seq(yy,zz);CHKERRQ(ierr); } 13613447b6efSHong Zhang ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 13623447b6efSHong Zhang ierr = VecGetArray(zz,&z);CHKERRQ(ierr); 13632d61bbb3SSatish Balay 13642d61bbb3SSatish Balay idx = a->j; 13652d61bbb3SSatish Balay v = a->a; 13663447b6efSHong Zhang if (usecprow){ 13673447b6efSHong Zhang mbs = cprow.nrows; 13683447b6efSHong Zhang ii = cprow.i; 13697b2bb3b9SHong Zhang ridx = cprow.rindex; 13703447b6efSHong Zhang } else { 13713447b6efSHong Zhang mbs=a->mbs; 13722d61bbb3SSatish Balay ii = a->i; 1373f1af5d2fSBarry Smith xb = x; 13743447b6efSHong Zhang } 13752d61bbb3SSatish Balay 13762d61bbb3SSatish Balay switch (bs) { 13772d61bbb3SSatish Balay case 1: 13782d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 13797b2bb3b9SHong Zhang if (usecprow) xb = x + ridx[i]; 1380f1af5d2fSBarry Smith x1 = xb[0]; 13813447b6efSHong Zhang ib = idx + ii[0]; 13823447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 13832d61bbb3SSatish Balay for (j=0; j<n; j++) { 13842d61bbb3SSatish Balay rval = ib[j]; 1385f1af5d2fSBarry Smith z[rval] += *v * x1; 1386f1af5d2fSBarry Smith v++; 13872d61bbb3SSatish Balay } 13883447b6efSHong Zhang if (!usecprow) xb++; 13892d61bbb3SSatish Balay } 13902d61bbb3SSatish Balay break; 13912d61bbb3SSatish Balay case 2: 13922d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 13937b2bb3b9SHong Zhang if (usecprow) xb = x + 2*ridx[i]; 1394f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; 13953447b6efSHong Zhang ib = idx + ii[0]; 13963447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 13972d61bbb3SSatish Balay for (j=0; j<n; j++) { 13982d61bbb3SSatish Balay rval = ib[j]*2; 13992d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2; 14002d61bbb3SSatish Balay z[rval++] += v[2]*x1 + v[3]*x2; 14012d61bbb3SSatish Balay v += 4; 14022d61bbb3SSatish Balay } 14033447b6efSHong Zhang if (!usecprow) xb += 2; 14042d61bbb3SSatish Balay } 14052d61bbb3SSatish Balay break; 14062d61bbb3SSatish Balay case 3: 14072d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 14087b2bb3b9SHong Zhang if (usecprow) xb = x + 3*ridx[i]; 1409f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 14103447b6efSHong Zhang ib = idx + ii[0]; 14113447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 14122d61bbb3SSatish Balay for (j=0; j<n; j++) { 14132d61bbb3SSatish Balay rval = ib[j]*3; 14142d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2 + v[2]*x3; 14152d61bbb3SSatish Balay z[rval++] += v[3]*x1 + v[4]*x2 + v[5]*x3; 14162d61bbb3SSatish Balay z[rval++] += v[6]*x1 + v[7]*x2 + v[8]*x3; 14172d61bbb3SSatish Balay v += 9; 14182d61bbb3SSatish Balay } 14193447b6efSHong Zhang if (!usecprow) xb += 3; 14202d61bbb3SSatish Balay } 14212d61bbb3SSatish Balay break; 14222d61bbb3SSatish Balay case 4: 14232d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 14247b2bb3b9SHong Zhang if (usecprow) xb = x + 4*ridx[i]; 1425f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; x4 = xb[3]; 14263447b6efSHong Zhang ib = idx + ii[0]; 14273447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 14282d61bbb3SSatish Balay for (j=0; j<n; j++) { 14292d61bbb3SSatish Balay rval = ib[j]*4; 14302d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4; 14312d61bbb3SSatish Balay z[rval++] += v[4]*x1 + v[5]*x2 + v[6]*x3 + v[7]*x4; 14322d61bbb3SSatish Balay z[rval++] += v[8]*x1 + v[9]*x2 + v[10]*x3 + v[11]*x4; 14332d61bbb3SSatish Balay z[rval++] += v[12]*x1 + v[13]*x2 + v[14]*x3 + v[15]*x4; 14342d61bbb3SSatish Balay v += 16; 14352d61bbb3SSatish Balay } 14363447b6efSHong Zhang if (!usecprow) xb += 4; 14372d61bbb3SSatish Balay } 14382d61bbb3SSatish Balay break; 14392d61bbb3SSatish Balay case 5: 14402d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 14417b2bb3b9SHong Zhang if (usecprow) xb = x + 5*ridx[i]; 1442f1af5d2fSBarry Smith x1 = xb[0]; x2 = xb[1]; x3 = xb[2]; 14432d61bbb3SSatish Balay x4 = xb[3]; x5 = xb[4]; 14443447b6efSHong Zhang ib = idx + ii[0]; 14453447b6efSHong Zhang n = ii[1] - ii[0]; ii++; 14462d61bbb3SSatish Balay for (j=0; j<n; j++) { 14472d61bbb3SSatish Balay rval = ib[j]*5; 14482d61bbb3SSatish Balay z[rval++] += v[0]*x1 + v[1]*x2 + v[2]*x3 + v[3]*x4 + v[4]*x5; 14492d61bbb3SSatish Balay z[rval++] += v[5]*x1 + v[6]*x2 + v[7]*x3 + v[8]*x4 + v[9]*x5; 14502d61bbb3SSatish Balay z[rval++] += v[10]*x1 + v[11]*x2 + v[12]*x3 + v[13]*x4 + v[14]*x5; 14512d61bbb3SSatish Balay z[rval++] += v[15]*x1 + v[16]*x2 + v[17]*x3 + v[18]*x4 + v[19]*x5; 14522d61bbb3SSatish Balay z[rval++] += v[20]*x1 + v[21]*x2 + v[22]*x3 + v[23]*x4 + v[24]*x5; 14532d61bbb3SSatish Balay v += 25; 14542d61bbb3SSatish Balay } 14553447b6efSHong Zhang if (!usecprow) xb += 5; 14562d61bbb3SSatish Balay } 14572d61bbb3SSatish Balay break; 1458f1af5d2fSBarry Smith default: { /* block sizes larger then 5 by 5 are handled by BLAS */ 1459690b6cddSBarry Smith PetscInt ncols,k; 14603447b6efSHong Zhang PetscScalar *work,*workt,*xtmp; 14613f1db9ecSBarry Smith 14622d61bbb3SSatish Balay if (!a->mult_work) { 1463d0f46423SBarry Smith k = PetscMax(A->rmap->n,A->cmap->n); 146487828ca2SBarry Smith ierr = PetscMalloc((k+1)*sizeof(PetscScalar),&a->mult_work);CHKERRQ(ierr); 14652d61bbb3SSatish Balay } 14662d61bbb3SSatish Balay work = a->mult_work; 14673447b6efSHong Zhang xtmp = x; 14682d61bbb3SSatish Balay for (i=0; i<mbs; i++) { 14692d61bbb3SSatish Balay n = ii[1] - ii[0]; ii++; 14702d61bbb3SSatish Balay ncols = n*bs; 147187828ca2SBarry Smith ierr = PetscMemzero(work,ncols*sizeof(PetscScalar));CHKERRQ(ierr); 14723447b6efSHong Zhang if (usecprow) { 14737b2bb3b9SHong Zhang xtmp = x + bs*ridx[i]; 14743447b6efSHong Zhang } 14753447b6efSHong Zhang Kernel_w_gets_w_plus_trans_Ar_times_v(bs,ncols,xtmp,v,work); 147671044d3cSBarry Smith /* BLASgemv_("T",&bs,&ncols,&_DOne,v,&bs,xtmp,&_One,&_DOne,work,&_One); */ 14772d61bbb3SSatish Balay v += n*bs2; 14783447b6efSHong Zhang if (!usecprow) xtmp += bs; 14792d61bbb3SSatish Balay workt = work; 14802d61bbb3SSatish Balay for (j=0; j<n; j++) { 14812d61bbb3SSatish Balay zb = z + bs*(*idx++); 14822d61bbb3SSatish Balay for (k=0; k<bs; k++) zb[k] += workt[k] ; 14832d61bbb3SSatish Balay workt += bs; 14842d61bbb3SSatish Balay } 14852d61bbb3SSatish Balay } 14862d61bbb3SSatish Balay } 14872d61bbb3SSatish Balay } 14883447b6efSHong Zhang ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 14893447b6efSHong Zhang ierr = VecRestoreArray(zz,&z);CHKERRQ(ierr); 1490dc0b31edSSatish Balay ierr = PetscLogFlops(2.0*a->nz*a->bs2);CHKERRQ(ierr); 14912d61bbb3SSatish Balay PetscFunctionReturn(0); 14922d61bbb3SSatish Balay } 14932d61bbb3SSatish Balay 14944a2ae208SSatish Balay #undef __FUNCT__ 14954a2ae208SSatish Balay #define __FUNCT__ "MatScale_SeqBAIJ" 1496f4df32b1SMatthew Knepley PetscErrorCode MatScale_SeqBAIJ(Mat inA,PetscScalar alpha) 14972d61bbb3SSatish Balay { 14982d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)inA->data; 1499690b6cddSBarry Smith PetscInt totalnz = a->bs2*a->nz; 1500f4df32b1SMatthew Knepley PetscScalar oalpha = alpha; 1501efee365bSSatish Balay PetscErrorCode ierr; 15020805154bSBarry Smith PetscBLASInt one = 1,tnz = PetscBLASIntCast(totalnz); 15032d61bbb3SSatish Balay 15042d61bbb3SSatish Balay PetscFunctionBegin; 1505f4df32b1SMatthew Knepley BLASscal_(&tnz,&oalpha,a->a,&one); 1506efee365bSSatish Balay ierr = PetscLogFlops(totalnz);CHKERRQ(ierr); 15072d61bbb3SSatish Balay PetscFunctionReturn(0); 15082d61bbb3SSatish Balay } 15092d61bbb3SSatish Balay 15104a2ae208SSatish Balay #undef __FUNCT__ 15114a2ae208SSatish Balay #define __FUNCT__ "MatNorm_SeqBAIJ" 1512dfbe8321SBarry Smith PetscErrorCode MatNorm_SeqBAIJ(Mat A,NormType type,PetscReal *norm) 15132d61bbb3SSatish Balay { 15148a62d963SHong Zhang PetscErrorCode ierr; 15152d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 15163f1db9ecSBarry Smith MatScalar *v = a->a; 1517329f5518SBarry Smith PetscReal sum = 0.0; 1518d0f46423SBarry Smith PetscInt i,j,k,bs=A->rmap->bs,nz=a->nz,bs2=a->bs2,k1; 15192d61bbb3SSatish Balay 15202d61bbb3SSatish Balay PetscFunctionBegin; 15212d61bbb3SSatish Balay if (type == NORM_FROBENIUS) { 15222d61bbb3SSatish Balay for (i=0; i< bs2*nz; i++) { 1523aa482453SBarry Smith #if defined(PETSC_USE_COMPLEX) 1524329f5518SBarry Smith sum += PetscRealPart(PetscConj(*v)*(*v)); v++; 15252d61bbb3SSatish Balay #else 15262d61bbb3SSatish Balay sum += (*v)*(*v); v++; 15272d61bbb3SSatish Balay #endif 15282d61bbb3SSatish Balay } 15292d61bbb3SSatish Balay *norm = sqrt(sum); 15308a62d963SHong Zhang } else if (type == NORM_1) { /* maximum column sum */ 15318a62d963SHong Zhang PetscReal *tmp; 15328a62d963SHong Zhang PetscInt *bcol = a->j; 1533d0f46423SBarry Smith ierr = PetscMalloc((A->cmap->n+1)*sizeof(PetscReal),&tmp);CHKERRQ(ierr); 1534d0f46423SBarry Smith ierr = PetscMemzero(tmp,A->cmap->n*sizeof(PetscReal));CHKERRQ(ierr); 15358a62d963SHong Zhang for (i=0; i<nz; i++){ 15368a62d963SHong Zhang for (j=0; j<bs; j++){ 15378a62d963SHong Zhang k1 = bs*(*bcol) + j; /* column index */ 15388a62d963SHong Zhang for (k=0; k<bs; k++){ 15398a62d963SHong Zhang tmp[k1] += PetscAbsScalar(*v); v++; 15408a62d963SHong Zhang } 15418a62d963SHong Zhang } 15428a62d963SHong Zhang bcol++; 15438a62d963SHong Zhang } 15448a62d963SHong Zhang *norm = 0.0; 1545d0f46423SBarry Smith for (j=0; j<A->cmap->n; j++) { 15468a62d963SHong Zhang if (tmp[j] > *norm) *norm = tmp[j]; 15478a62d963SHong Zhang } 15488a62d963SHong Zhang ierr = PetscFree(tmp);CHKERRQ(ierr); 1549596552b5SBarry Smith } else if (type == NORM_INFINITY) { /* maximum row sum */ 1550596552b5SBarry Smith *norm = 0.0; 1551596552b5SBarry Smith for (k=0; k<bs; k++) { 155274f84c7bSSatish Balay for (j=0; j<a->mbs; j++) { 1553596552b5SBarry Smith v = a->a + bs2*a->i[j] + k; 1554596552b5SBarry Smith sum = 0.0; 1555596552b5SBarry Smith for (i=0; i<a->i[j+1]-a->i[j]; i++) { 15560e90e235SBarry Smith for (k1=0; k1<bs; k1++){ 1557596552b5SBarry Smith sum += PetscAbsScalar(*v); 1558596552b5SBarry Smith v += bs; 15592d61bbb3SSatish Balay } 15600e90e235SBarry Smith } 1561596552b5SBarry Smith if (sum > *norm) *norm = sum; 1562596552b5SBarry Smith } 1563596552b5SBarry Smith } 1564596552b5SBarry Smith } else { 156529bbc08cSBarry Smith SETERRQ(PETSC_ERR_SUP,"No support for this norm yet"); 15662d61bbb3SSatish Balay } 15672d61bbb3SSatish Balay PetscFunctionReturn(0); 15682d61bbb3SSatish Balay } 15692d61bbb3SSatish Balay 15702d61bbb3SSatish Balay 15714a2ae208SSatish Balay #undef __FUNCT__ 15724a2ae208SSatish Balay #define __FUNCT__ "MatEqual_SeqBAIJ" 1573dfbe8321SBarry Smith PetscErrorCode MatEqual_SeqBAIJ(Mat A,Mat B,PetscTruth* flg) 15742d61bbb3SSatish Balay { 15752d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ *)A->data,*b = (Mat_SeqBAIJ *)B->data; 1576dfbe8321SBarry Smith PetscErrorCode ierr; 15772d61bbb3SSatish Balay 15782d61bbb3SSatish Balay PetscFunctionBegin; 15792d61bbb3SSatish Balay /* If the matrix/block dimensions are not equal, or no of nonzeros or shift */ 1580d0f46423SBarry Smith if ((A->rmap->N != B->rmap->N) || (A->cmap->n != B->cmap->n) || (A->rmap->bs != B->rmap->bs)|| (a->nz != b->nz)) { 1581273d9f13SBarry Smith *flg = PETSC_FALSE; 1582273d9f13SBarry Smith PetscFunctionReturn(0); 15832d61bbb3SSatish Balay } 15842d61bbb3SSatish Balay 15852d61bbb3SSatish Balay /* if the a->i are the same */ 1586690b6cddSBarry Smith ierr = PetscMemcmp(a->i,b->i,(a->mbs+1)*sizeof(PetscInt),flg);CHKERRQ(ierr); 1587abc0a331SBarry Smith if (!*flg) { 15880f5bd95cSBarry Smith PetscFunctionReturn(0); 15892d61bbb3SSatish Balay } 15902d61bbb3SSatish Balay 15912d61bbb3SSatish Balay /* if a->j are the same */ 1592690b6cddSBarry Smith ierr = PetscMemcmp(a->j,b->j,(a->nz)*sizeof(PetscInt),flg);CHKERRQ(ierr); 1593abc0a331SBarry Smith if (!*flg) { 15940f5bd95cSBarry Smith PetscFunctionReturn(0); 15952d61bbb3SSatish Balay } 15962d61bbb3SSatish Balay /* if a->a are the same */ 1597d0f46423SBarry Smith ierr = PetscMemcmp(a->a,b->a,(a->nz)*(A->rmap->bs)*(B->rmap->bs)*sizeof(PetscScalar),flg);CHKERRQ(ierr); 15982d61bbb3SSatish Balay PetscFunctionReturn(0); 15992d61bbb3SSatish Balay 16002d61bbb3SSatish Balay } 16012d61bbb3SSatish Balay 16024a2ae208SSatish Balay #undef __FUNCT__ 16034a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonal_SeqBAIJ" 1604dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_SeqBAIJ(Mat A,Vec v) 16052d61bbb3SSatish Balay { 16062d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1607dfbe8321SBarry Smith PetscErrorCode ierr; 1608690b6cddSBarry Smith PetscInt i,j,k,n,row,bs,*ai,*aj,ambs,bs2; 160987828ca2SBarry Smith PetscScalar *x,zero = 0.0; 16103f1db9ecSBarry Smith MatScalar *aa,*aa_j; 16112d61bbb3SSatish Balay 16122d61bbb3SSatish Balay PetscFunctionBegin; 161329bbc08cSBarry Smith if (A->factor) SETERRQ(PETSC_ERR_ARG_WRONGSTATE,"Not for factored matrix"); 1614d0f46423SBarry Smith bs = A->rmap->bs; 16152d61bbb3SSatish Balay aa = a->a; 16162d61bbb3SSatish Balay ai = a->i; 16172d61bbb3SSatish Balay aj = a->j; 16182d61bbb3SSatish Balay ambs = a->mbs; 16192d61bbb3SSatish Balay bs2 = a->bs2; 16202d61bbb3SSatish Balay 16212dcb1b2aSMatthew Knepley ierr = VecSet(v,zero);CHKERRQ(ierr); 16221ebc52fbSHong Zhang ierr = VecGetArray(v,&x);CHKERRQ(ierr); 1623e1311b90SBarry Smith ierr = VecGetLocalSize(v,&n);CHKERRQ(ierr); 1624d0f46423SBarry Smith if (n != A->rmap->N) SETERRQ(PETSC_ERR_ARG_SIZ,"Nonconforming matrix and vector"); 16252d61bbb3SSatish Balay for (i=0; i<ambs; i++) { 16262d61bbb3SSatish Balay for (j=ai[i]; j<ai[i+1]; j++) { 16272d61bbb3SSatish Balay if (aj[j] == i) { 16282d61bbb3SSatish Balay row = i*bs; 16292d61bbb3SSatish Balay aa_j = aa+j*bs2; 16302d61bbb3SSatish Balay for (k=0; k<bs2; k+=(bs+1),row++) x[row] = aa_j[k]; 16312d61bbb3SSatish Balay break; 16322d61bbb3SSatish Balay } 16332d61bbb3SSatish Balay } 16342d61bbb3SSatish Balay } 16351ebc52fbSHong Zhang ierr = VecRestoreArray(v,&x);CHKERRQ(ierr); 16362d61bbb3SSatish Balay PetscFunctionReturn(0); 16372d61bbb3SSatish Balay } 16382d61bbb3SSatish Balay 16394a2ae208SSatish Balay #undef __FUNCT__ 16404a2ae208SSatish Balay #define __FUNCT__ "MatDiagonalScale_SeqBAIJ" 1641dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_SeqBAIJ(Mat A,Vec ll,Vec rr) 16422d61bbb3SSatish Balay { 16432d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 164487828ca2SBarry Smith PetscScalar *l,*r,x,*li,*ri; 16453f1db9ecSBarry Smith MatScalar *aa,*v; 1646dfbe8321SBarry Smith PetscErrorCode ierr; 1647690b6cddSBarry Smith PetscInt i,j,k,lm,rn,M,m,n,*ai,*aj,mbs,tmp,bs,bs2; 16482d61bbb3SSatish Balay 16492d61bbb3SSatish Balay PetscFunctionBegin; 16502d61bbb3SSatish Balay ai = a->i; 16512d61bbb3SSatish Balay aj = a->j; 16522d61bbb3SSatish Balay aa = a->a; 1653d0f46423SBarry Smith m = A->rmap->n; 1654d0f46423SBarry Smith n = A->cmap->n; 1655d0f46423SBarry Smith bs = A->rmap->bs; 16562d61bbb3SSatish Balay mbs = a->mbs; 16572d61bbb3SSatish Balay bs2 = a->bs2; 16582d61bbb3SSatish Balay if (ll) { 16591ebc52fbSHong Zhang ierr = VecGetArray(ll,&l);CHKERRQ(ierr); 1660e1311b90SBarry Smith ierr = VecGetLocalSize(ll,&lm);CHKERRQ(ierr); 166129bbc08cSBarry Smith if (lm != m) SETERRQ(PETSC_ERR_ARG_SIZ,"Left scaling vector wrong length"); 16622d61bbb3SSatish Balay for (i=0; i<mbs; i++) { /* for each block row */ 16632d61bbb3SSatish Balay M = ai[i+1] - ai[i]; 16642d61bbb3SSatish Balay li = l + i*bs; 16652d61bbb3SSatish Balay v = aa + bs2*ai[i]; 16662d61bbb3SSatish Balay for (j=0; j<M; j++) { /* for each block */ 16672d61bbb3SSatish Balay for (k=0; k<bs2; k++) { 16682d61bbb3SSatish Balay (*v++) *= li[k%bs]; 16692d61bbb3SSatish Balay } 16702d61bbb3SSatish Balay } 16712d61bbb3SSatish Balay } 16721ebc52fbSHong Zhang ierr = VecRestoreArray(ll,&l);CHKERRQ(ierr); 1673efee365bSSatish Balay ierr = PetscLogFlops(a->nz);CHKERRQ(ierr); 16742d61bbb3SSatish Balay } 16752d61bbb3SSatish Balay 16762d61bbb3SSatish Balay if (rr) { 16771ebc52fbSHong Zhang ierr = VecGetArray(rr,&r);CHKERRQ(ierr); 1678e1311b90SBarry Smith ierr = VecGetLocalSize(rr,&rn);CHKERRQ(ierr); 167929bbc08cSBarry Smith if (rn != n) SETERRQ(PETSC_ERR_ARG_SIZ,"Right scaling vector wrong length"); 16802d61bbb3SSatish Balay for (i=0; i<mbs; i++) { /* for each block row */ 16812d61bbb3SSatish Balay M = ai[i+1] - ai[i]; 16822d61bbb3SSatish Balay v = aa + bs2*ai[i]; 16832d61bbb3SSatish Balay for (j=0; j<M; j++) { /* for each block */ 16842d61bbb3SSatish Balay ri = r + bs*aj[ai[i]+j]; 16852d61bbb3SSatish Balay for (k=0; k<bs; k++) { 16862d61bbb3SSatish Balay x = ri[k]; 16872d61bbb3SSatish Balay for (tmp=0; tmp<bs; tmp++) (*v++) *= x; 16882d61bbb3SSatish Balay } 16892d61bbb3SSatish Balay } 16902d61bbb3SSatish Balay } 16911ebc52fbSHong Zhang ierr = VecRestoreArray(rr,&r);CHKERRQ(ierr); 1692efee365bSSatish Balay ierr = PetscLogFlops(a->nz);CHKERRQ(ierr); 16932d61bbb3SSatish Balay } 16942d61bbb3SSatish Balay PetscFunctionReturn(0); 16952d61bbb3SSatish Balay } 16962d61bbb3SSatish Balay 16972d61bbb3SSatish Balay 16984a2ae208SSatish Balay #undef __FUNCT__ 16994a2ae208SSatish Balay #define __FUNCT__ "MatGetInfo_SeqBAIJ" 1700dfbe8321SBarry Smith PetscErrorCode MatGetInfo_SeqBAIJ(Mat A,MatInfoType flag,MatInfo *info) 17012d61bbb3SSatish Balay { 17022d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 17032d61bbb3SSatish Balay 17042d61bbb3SSatish Balay PetscFunctionBegin; 17052d61bbb3SSatish Balay info->block_size = a->bs2; 17062d61bbb3SSatish Balay info->nz_allocated = a->maxnz; 17072d61bbb3SSatish Balay info->nz_used = a->bs2*a->nz; 17082d61bbb3SSatish Balay info->nz_unneeded = (double)(info->nz_allocated - info->nz_used); 17092d61bbb3SSatish Balay info->assemblies = A->num_ass; 17102d61bbb3SSatish Balay info->mallocs = a->reallocs; 17117adad957SLisandro Dalcin info->memory = ((PetscObject)A)->mem; 17122d61bbb3SSatish Balay if (A->factor) { 17132d61bbb3SSatish Balay info->fill_ratio_given = A->info.fill_ratio_given; 17142d61bbb3SSatish Balay info->fill_ratio_needed = A->info.fill_ratio_needed; 17152d61bbb3SSatish Balay info->factor_mallocs = A->info.factor_mallocs; 17162d61bbb3SSatish Balay } else { 17172d61bbb3SSatish Balay info->fill_ratio_given = 0; 17182d61bbb3SSatish Balay info->fill_ratio_needed = 0; 17192d61bbb3SSatish Balay info->factor_mallocs = 0; 17202d61bbb3SSatish Balay } 17212d61bbb3SSatish Balay PetscFunctionReturn(0); 17222d61bbb3SSatish Balay } 17232d61bbb3SSatish Balay 17242d61bbb3SSatish Balay 17254a2ae208SSatish Balay #undef __FUNCT__ 17264a2ae208SSatish Balay #define __FUNCT__ "MatZeroEntries_SeqBAIJ" 1727dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_SeqBAIJ(Mat A) 17282d61bbb3SSatish Balay { 17292d61bbb3SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ*)A->data; 1730dfbe8321SBarry Smith PetscErrorCode ierr; 17312d61bbb3SSatish Balay 17322d61bbb3SSatish Balay PetscFunctionBegin; 1733549d3d68SSatish Balay ierr = PetscMemzero(a->a,a->bs2*a->i[a->mbs]*sizeof(MatScalar));CHKERRQ(ierr); 17342d61bbb3SSatish Balay PetscFunctionReturn(0); 17352d61bbb3SSatish Balay } 1736