14e2b4712SSatish Balay #ifdef PETSC_RCS_HEADER 2*744db789SBarry Smith static char vcid[] = "$Id: baijfact2.c,v 1.23 1999/01/24 19:57:49 bsmith Exp bsmith $"; 34e2b4712SSatish Balay #endif 44e2b4712SSatish Balay /* 54e2b4712SSatish Balay Factorization code for BAIJ format. 64e2b4712SSatish Balay */ 74e2b4712SSatish Balay 8bc6694efSSatish Balay 94e2b4712SSatish Balay #include "src/mat/impls/baij/seq/baij.h" 104e2b4712SSatish Balay #include "src/vec/vecimpl.h" 114e2b4712SSatish Balay #include "src/inline/ilu.h" 1274c49faeSBarry Smith #include "src/inline/dot.h" 134e2b4712SSatish Balay 144e2b4712SSatish Balay /* ----------------------------------------------------------- */ 154e2b4712SSatish Balay #undef __FUNC__ 164e2b4712SSatish Balay #define __FUNC__ "MatSolve_SeqBAIJ_N" 174e2b4712SSatish Balay int MatSolve_SeqBAIJ_N(Mat A,Vec bb,Vec xx) 184e2b4712SSatish Balay { 194e2b4712SSatish Balay Mat_SeqBAIJ *a=(Mat_SeqBAIJ *)A->data; 204e2b4712SSatish Balay IS iscol=a->col,isrow=a->row; 214e2b4712SSatish Balay int *r,*c,ierr,i,n=a->mbs,*vi,*ai=a->i,*aj=a->j; 224e2b4712SSatish Balay int nz,bs=a->bs,bs2=a->bs2,*rout,*cout; 233f1db9ecSBarry Smith MatScalar *aa=a->a,*v; 243f1db9ecSBarry Smith Scalar *x,*b,*sum,*tmp,*lsum; 254e2b4712SSatish Balay 264e2b4712SSatish Balay PetscFunctionBegin; 27e1311b90SBarry Smith ierr = VecGetArray(bb,&b);CHKERRQ(ierr); 28e1311b90SBarry Smith ierr = VecGetArray(xx,&x); CHKERRQ(ierr); 294e2b4712SSatish Balay tmp = a->solve_work; 304e2b4712SSatish Balay 314e2b4712SSatish Balay ierr = ISGetIndices(isrow,&rout);CHKERRQ(ierr); r = rout; 324e2b4712SSatish Balay ierr = ISGetIndices(iscol,&cout);CHKERRQ(ierr); c = cout + (n-1); 334e2b4712SSatish Balay 344e2b4712SSatish Balay /* forward solve the lower triangular */ 354e2b4712SSatish Balay PetscMemcpy(tmp,b + bs*(*r++), bs*sizeof(Scalar)); 364e2b4712SSatish Balay for ( i=1; i<n; i++ ) { 374e2b4712SSatish Balay v = aa + bs2*ai[i]; 384e2b4712SSatish Balay vi = aj + ai[i]; 394e2b4712SSatish Balay nz = a->diag[i] - ai[i]; 404e2b4712SSatish Balay sum = tmp + bs*i; 414e2b4712SSatish Balay PetscMemcpy(sum,b+bs*(*r++),bs*sizeof(Scalar)); 424e2b4712SSatish Balay while (nz--) { 434e2b4712SSatish Balay Kernel_v_gets_v_minus_A_times_w(bs,sum,v,tmp+bs*(*vi++)); 444e2b4712SSatish Balay v += bs2; 454e2b4712SSatish Balay } 464e2b4712SSatish Balay } 474e2b4712SSatish Balay /* backward solve the upper triangular */ 484e2b4712SSatish Balay lsum = a->solve_work + a->n; 494e2b4712SSatish Balay for ( i=n-1; i>=0; i-- ){ 504e2b4712SSatish Balay v = aa + bs2*(a->diag[i] + 1); 514e2b4712SSatish Balay vi = aj + a->diag[i] + 1; 524e2b4712SSatish Balay nz = ai[i+1] - a->diag[i] - 1; 534e2b4712SSatish Balay PetscMemcpy(lsum,tmp+i*bs,bs*sizeof(Scalar)); 544e2b4712SSatish Balay while (nz--) { 554e2b4712SSatish Balay Kernel_v_gets_v_minus_A_times_w(bs,lsum,v,tmp+bs*(*vi++)); 564e2b4712SSatish Balay v += bs2; 574e2b4712SSatish Balay } 584e2b4712SSatish Balay Kernel_w_gets_A_times_v(bs,lsum,aa+bs2*a->diag[i],tmp+i*bs); 594e2b4712SSatish Balay PetscMemcpy(x + bs*(*c--),tmp+i*bs,bs*sizeof(Scalar)); 604e2b4712SSatish Balay } 614e2b4712SSatish Balay 624e2b4712SSatish Balay ierr = ISRestoreIndices(isrow,&rout); CHKERRQ(ierr); 634e2b4712SSatish Balay ierr = ISRestoreIndices(iscol,&cout); CHKERRQ(ierr); 64e1311b90SBarry Smith ierr = VecRestoreArray(bb,&b); CHKERRQ(ierr); 65e1311b90SBarry Smith ierr = VecRestoreArray(xx,&x); CHKERRQ(ierr); 6642015d63SBarry Smith PLogFlops(2*(a->bs2)*(a->nz) - a->bs*a->n); 674e2b4712SSatish Balay PetscFunctionReturn(0); 684e2b4712SSatish Balay } 694e2b4712SSatish Balay 704e2b4712SSatish Balay #undef __FUNC__ 714e2b4712SSatish Balay #define __FUNC__ "MatSolve_SeqBAIJ_7" 724e2b4712SSatish Balay int MatSolve_SeqBAIJ_7(Mat A,Vec bb,Vec xx) 734e2b4712SSatish Balay { 744e2b4712SSatish Balay Mat_SeqBAIJ *a=(Mat_SeqBAIJ *)A->data; 754e2b4712SSatish Balay IS iscol=a->col,isrow=a->row; 764e2b4712SSatish Balay int *r,*c,ierr,i,n=a->mbs,*vi,*ai=a->i,*aj=a->j,nz,idx,idt,idc,*rout,*cout; 774e2b4712SSatish Balay int *diag = a->diag; 783f1db9ecSBarry Smith MatScalar *aa=a->a,*v; 793f1db9ecSBarry Smith Scalar sum1,sum2,sum3,sum4,sum5,sum6,sum7,x1,x2,x3,x4,x5,x6,x7; 803f1db9ecSBarry Smith Scalar *x,*b,*tmp; 814e2b4712SSatish Balay 824e2b4712SSatish Balay PetscFunctionBegin; 83e1311b90SBarry Smith ierr = VecGetArray(bb,&b); CHKERRQ(ierr); 84e1311b90SBarry Smith ierr = VecGetArray(xx,&x); CHKERRQ(ierr); 854e2b4712SSatish Balay tmp = a->solve_work; 864e2b4712SSatish Balay 874e2b4712SSatish Balay ierr = ISGetIndices(isrow,&rout);CHKERRQ(ierr); r = rout; 884e2b4712SSatish Balay ierr = ISGetIndices(iscol,&cout);CHKERRQ(ierr); c = cout + (n-1); 894e2b4712SSatish Balay 904e2b4712SSatish Balay /* forward solve the lower triangular */ 914e2b4712SSatish Balay idx = 7*(*r++); 924e2b4712SSatish Balay tmp[0] = b[idx]; tmp[1] = b[1+idx]; 934e2b4712SSatish Balay tmp[2] = b[2+idx]; tmp[3] = b[3+idx]; tmp[4] = b[4+idx]; 944e2b4712SSatish Balay tmp[5] = b[5+idx]; tmp[6] = b[6+idx]; 954e2b4712SSatish Balay 964e2b4712SSatish Balay for ( i=1; i<n; i++ ) { 974e2b4712SSatish Balay v = aa + 49*ai[i]; 984e2b4712SSatish Balay vi = aj + ai[i]; 994e2b4712SSatish Balay nz = diag[i] - ai[i]; 1004e2b4712SSatish Balay idx = 7*(*r++); 1014e2b4712SSatish Balay sum1 = b[idx];sum2 = b[1+idx];sum3 = b[2+idx];sum4 = b[3+idx]; 1024e2b4712SSatish Balay sum5 = b[4+idx];sum6 = b[5+idx];sum7 = b[6+idx]; 1034e2b4712SSatish Balay while (nz--) { 1044e2b4712SSatish Balay idx = 7*(*vi++); 1054e2b4712SSatish Balay x1 = tmp[idx]; x2 = tmp[1+idx];x3 = tmp[2+idx]; 1064e2b4712SSatish Balay x4 = tmp[3+idx];x5 = tmp[4+idx]; 1074e2b4712SSatish Balay x6 = tmp[5+idx];x7 = tmp[6+idx]; 1084e2b4712SSatish Balay sum1 -= v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4 + v[28]*x5 + v[35]*x6 + v[42]*x7; 1094e2b4712SSatish Balay sum2 -= v[1]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4 + v[29]*x5 + v[36]*x6 + v[43]*x7; 1104e2b4712SSatish Balay sum3 -= v[2]*x1 + v[9]*x2 + v[16]*x3 + v[23]*x4 + v[30]*x5 + v[37]*x6 + v[44]*x7; 1114e2b4712SSatish Balay sum4 -= v[3]*x1 + v[10]*x2 + v[17]*x3 + v[24]*x4 + v[31]*x5 + v[38]*x6 + v[45]*x7; 1124e2b4712SSatish Balay sum5 -= v[4]*x1 + v[11]*x2 + v[18]*x3 + v[25]*x4 + v[32]*x5 + v[39]*x6 + v[46]*x7; 1134e2b4712SSatish Balay sum6 -= v[5]*x1 + v[12]*x2 + v[19]*x3 + v[26]*x4 + v[33]*x5 + v[40]*x6 + v[47]*x7; 1144e2b4712SSatish Balay sum7 -= v[6]*x1 + v[13]*x2 + v[20]*x3 + v[27]*x4 + v[34]*x5 + v[41]*x6 + v[48]*x7; 1154e2b4712SSatish Balay v += 49; 1164e2b4712SSatish Balay } 1174e2b4712SSatish Balay idx = 7*i; 1184e2b4712SSatish Balay tmp[idx] = sum1;tmp[1+idx] = sum2; 1194e2b4712SSatish Balay tmp[2+idx] = sum3;tmp[3+idx] = sum4; tmp[4+idx] = sum5; 1204e2b4712SSatish Balay tmp[5+idx] = sum6;tmp[6+idx] = sum7; 1214e2b4712SSatish Balay } 1224e2b4712SSatish Balay /* backward solve the upper triangular */ 1234e2b4712SSatish Balay for ( i=n-1; i>=0; i-- ){ 1244e2b4712SSatish Balay v = aa + 49*diag[i] + 49; 1254e2b4712SSatish Balay vi = aj + diag[i] + 1; 1264e2b4712SSatish Balay nz = ai[i+1] - diag[i] - 1; 1274e2b4712SSatish Balay idt = 7*i; 1284e2b4712SSatish Balay sum1 = tmp[idt]; sum2 = tmp[1+idt]; 1294e2b4712SSatish Balay sum3 = tmp[2+idt];sum4 = tmp[3+idt]; sum5 = tmp[4+idt]; 1304e2b4712SSatish Balay sum6 = tmp[5+idt];sum7 = tmp[6+idt]; 1314e2b4712SSatish Balay while (nz--) { 1324e2b4712SSatish Balay idx = 7*(*vi++); 1334e2b4712SSatish Balay x1 = tmp[idx]; x2 = tmp[1+idx]; 1344e2b4712SSatish Balay x3 = tmp[2+idx]; x4 = tmp[3+idx]; x5 = tmp[4+idx]; 1354e2b4712SSatish Balay x6 = tmp[5+idx]; x7 = tmp[6+idx]; 1364e2b4712SSatish Balay sum1 -= v[0]*x1 + v[7]*x2 + v[14]*x3 + v[21]*x4 + v[28]*x5 + v[35]*x6 + v[42]*x7; 1374e2b4712SSatish Balay sum2 -= v[1]*x1 + v[8]*x2 + v[15]*x3 + v[22]*x4 + v[29]*x5 + v[36]*x6 + v[43]*x7; 1384e2b4712SSatish Balay sum3 -= v[2]*x1 + v[9]*x2 + v[16]*x3 + v[23]*x4 + v[30]*x5 + v[37]*x6 + v[44]*x7; 1394e2b4712SSatish Balay sum4 -= v[3]*x1 + v[10]*x2 + v[17]*x3 + v[24]*x4 + v[31]*x5 + v[38]*x6 + v[45]*x7; 1404e2b4712SSatish Balay sum5 -= v[4]*x1 + v[11]*x2 + v[18]*x3 + v[25]*x4 + v[32]*x5 + v[39]*x6 + v[46]*x7; 1414e2b4712SSatish Balay sum6 -= v[5]*x1 + v[12]*x2 + v[19]*x3 + v[26]*x4 + v[33]*x5 + v[40]*x6 + v[47]*x7; 1424e2b4712SSatish Balay sum7 -= v[6]*x1 + v[13]*x2 + v[20]*x3 + v[27]*x4 + v[34]*x5 + v[41]*x6 + v[48]*x7; 1434e2b4712SSatish Balay v += 49; 1444e2b4712SSatish Balay } 1454e2b4712SSatish Balay idc = 7*(*c--); 1464e2b4712SSatish Balay v = aa + 49*diag[i]; 1474e2b4712SSatish Balay x[idc] = tmp[idt] = v[0]*sum1+v[7]*sum2+v[14]*sum3+ 1484e2b4712SSatish Balay v[21]*sum4+v[28]*sum5+v[35]*sum6+v[42]*sum7; 1494e2b4712SSatish Balay x[1+idc] = tmp[1+idt] = v[1]*sum1+v[8]*sum2+v[15]*sum3+ 1504e2b4712SSatish Balay v[22]*sum4+v[29]*sum5+v[36]*sum6+v[43]*sum7; 1514e2b4712SSatish Balay x[2+idc] = tmp[2+idt] = v[2]*sum1+v[9]*sum2+v[16]*sum3+ 1524e2b4712SSatish Balay v[23]*sum4+v[30]*sum5+v[37]*sum6+v[44]*sum7; 1534e2b4712SSatish Balay x[3+idc] = tmp[3+idt] = v[3]*sum1+v[10]*sum2+v[17]*sum3+ 1544e2b4712SSatish Balay v[24]*sum4+v[31]*sum5+v[38]*sum6+v[45]*sum7; 1554e2b4712SSatish Balay x[4+idc] = tmp[4+idt] = v[4]*sum1+v[11]*sum2+v[18]*sum3+ 1564e2b4712SSatish Balay v[25]*sum4+v[32]*sum5+v[39]*sum6+v[46]*sum7; 1574e2b4712SSatish Balay x[5+idc] = tmp[5+idt] = v[5]*sum1+v[12]*sum2+v[19]*sum3+ 1584e2b4712SSatish Balay v[26]*sum4+v[33]*sum5+v[40]*sum6+v[47]*sum7; 1594e2b4712SSatish Balay x[6+idc] = tmp[6+idt] = v[6]*sum1+v[13]*sum2+v[20]*sum3+ 1604e2b4712SSatish Balay v[27]*sum4+v[34]*sum5+v[41]*sum6+v[48]*sum7; 1614e2b4712SSatish Balay } 1624e2b4712SSatish Balay 1634e2b4712SSatish Balay ierr = ISRestoreIndices(isrow,&rout); CHKERRQ(ierr); 1644e2b4712SSatish Balay ierr = ISRestoreIndices(iscol,&cout); CHKERRQ(ierr); 165e1311b90SBarry Smith ierr = VecRestoreArray(bb,&b); CHKERRQ(ierr); 166e1311b90SBarry Smith ierr = VecRestoreArray(xx,&x); CHKERRQ(ierr); 16742015d63SBarry Smith PLogFlops(2*49*(a->nz) - 7*a->n); 1684e2b4712SSatish Balay PetscFunctionReturn(0); 1694e2b4712SSatish Balay } 1704e2b4712SSatish Balay 1714e2b4712SSatish Balay #undef __FUNC__ 1724e2b4712SSatish Balay #define __FUNC__ "MatSolve_SeqBAIJ_5" 1734e2b4712SSatish Balay int MatSolve_SeqBAIJ_5(Mat A,Vec bb,Vec xx) 1744e2b4712SSatish Balay { 1754e2b4712SSatish Balay Mat_SeqBAIJ *a=(Mat_SeqBAIJ *)A->data; 1764e2b4712SSatish Balay IS iscol=a->col,isrow=a->row; 1774e2b4712SSatish Balay int *r,*c,ierr,i,n=a->mbs,*vi,*ai=a->i,*aj=a->j,nz,idx,idt,idc,*rout,*cout; 1784e2b4712SSatish Balay int *diag = a->diag; 1793f1db9ecSBarry Smith MatScalar *aa=a->a,*v; 1803f1db9ecSBarry Smith Scalar *x,*b,sum1,sum2,sum3,sum4,sum5,x1,x2,x3,x4,x5,*tmp; 1814e2b4712SSatish Balay 1824e2b4712SSatish Balay PetscFunctionBegin; 183e1311b90SBarry Smith ierr = VecGetArray(bb,&b); CHKERRQ(ierr); 184e1311b90SBarry Smith ierr = VecGetArray(xx,&x); CHKERRQ(ierr); 1854e2b4712SSatish Balay tmp = a->solve_work; 1864e2b4712SSatish Balay 1874e2b4712SSatish Balay ierr = ISGetIndices(isrow,&rout);CHKERRQ(ierr); r = rout; 1884e2b4712SSatish Balay ierr = ISGetIndices(iscol,&cout);CHKERRQ(ierr); c = cout + (n-1); 1894e2b4712SSatish Balay 1904e2b4712SSatish Balay /* forward solve the lower triangular */ 1914e2b4712SSatish Balay idx = 5*(*r++); 1924e2b4712SSatish Balay tmp[0] = b[idx]; tmp[1] = b[1+idx]; 1934e2b4712SSatish Balay tmp[2] = b[2+idx]; tmp[3] = b[3+idx]; tmp[4] = b[4+idx]; 1944e2b4712SSatish Balay for ( i=1; i<n; i++ ) { 1954e2b4712SSatish Balay v = aa + 25*ai[i]; 1964e2b4712SSatish Balay vi = aj + ai[i]; 1974e2b4712SSatish Balay nz = diag[i] - ai[i]; 1984e2b4712SSatish Balay idx = 5*(*r++); 1994e2b4712SSatish Balay sum1 = b[idx];sum2 = b[1+idx];sum3 = b[2+idx];sum4 = b[3+idx]; 2004e2b4712SSatish Balay sum5 = b[4+idx]; 2014e2b4712SSatish Balay while (nz--) { 2024e2b4712SSatish Balay idx = 5*(*vi++); 2034e2b4712SSatish Balay x1 = tmp[idx]; x2 = tmp[1+idx];x3 = tmp[2+idx]; 2044e2b4712SSatish Balay x4 = tmp[3+idx];x5 = tmp[4+idx]; 2054e2b4712SSatish Balay sum1 -= v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4 + v[20]*x5; 2064e2b4712SSatish Balay sum2 -= v[1]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4 + v[21]*x5; 2074e2b4712SSatish Balay sum3 -= v[2]*x1 + v[7]*x2 + v[12]*x3 + v[17]*x4 + v[22]*x5; 2084e2b4712SSatish Balay sum4 -= v[3]*x1 + v[8]*x2 + v[13]*x3 + v[18]*x4 + v[23]*x5; 2094e2b4712SSatish Balay sum5 -= v[4]*x1 + v[9]*x2 + v[14]*x3 + v[19]*x4 + v[24]*x5; 2104e2b4712SSatish Balay v += 25; 2114e2b4712SSatish Balay } 2124e2b4712SSatish Balay idx = 5*i; 2134e2b4712SSatish Balay tmp[idx] = sum1;tmp[1+idx] = sum2; 2144e2b4712SSatish Balay tmp[2+idx] = sum3;tmp[3+idx] = sum4; tmp[4+idx] = sum5; 2154e2b4712SSatish Balay } 2164e2b4712SSatish Balay /* backward solve the upper triangular */ 2174e2b4712SSatish Balay for ( i=n-1; i>=0; i-- ){ 2184e2b4712SSatish Balay v = aa + 25*diag[i] + 25; 2194e2b4712SSatish Balay vi = aj + diag[i] + 1; 2204e2b4712SSatish Balay nz = ai[i+1] - diag[i] - 1; 2214e2b4712SSatish Balay idt = 5*i; 2224e2b4712SSatish Balay sum1 = tmp[idt]; sum2 = tmp[1+idt]; 2234e2b4712SSatish Balay sum3 = tmp[2+idt];sum4 = tmp[3+idt]; sum5 = tmp[4+idt]; 2244e2b4712SSatish Balay while (nz--) { 2254e2b4712SSatish Balay idx = 5*(*vi++); 2264e2b4712SSatish Balay x1 = tmp[idx]; x2 = tmp[1+idx]; 2274e2b4712SSatish Balay x3 = tmp[2+idx]; x4 = tmp[3+idx]; x5 = tmp[4+idx]; 2284e2b4712SSatish Balay sum1 -= v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4 + v[20]*x5; 2294e2b4712SSatish Balay sum2 -= v[1]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4 + v[21]*x5; 2304e2b4712SSatish Balay sum3 -= v[2]*x1 + v[7]*x2 + v[12]*x3 + v[17]*x4 + v[22]*x5; 2314e2b4712SSatish Balay sum4 -= v[3]*x1 + v[8]*x2 + v[13]*x3 + v[18]*x4 + v[23]*x5; 2324e2b4712SSatish Balay sum5 -= v[4]*x1 + v[9]*x2 + v[14]*x3 + v[19]*x4 + v[24]*x5; 2334e2b4712SSatish Balay v += 25; 2344e2b4712SSatish Balay } 2354e2b4712SSatish Balay idc = 5*(*c--); 2364e2b4712SSatish Balay v = aa + 25*diag[i]; 2374e2b4712SSatish Balay x[idc] = tmp[idt] = v[0]*sum1+v[5]*sum2+v[10]*sum3+ 2384e2b4712SSatish Balay v[15]*sum4+v[20]*sum5; 2394e2b4712SSatish Balay x[1+idc] = tmp[1+idt] = v[1]*sum1+v[6]*sum2+v[11]*sum3+ 2404e2b4712SSatish Balay v[16]*sum4+v[21]*sum5; 2414e2b4712SSatish Balay x[2+idc] = tmp[2+idt] = v[2]*sum1+v[7]*sum2+v[12]*sum3+ 2424e2b4712SSatish Balay v[17]*sum4+v[22]*sum5; 2434e2b4712SSatish Balay x[3+idc] = tmp[3+idt] = v[3]*sum1+v[8]*sum2+v[13]*sum3+ 2444e2b4712SSatish Balay v[18]*sum4+v[23]*sum5; 2454e2b4712SSatish Balay x[4+idc] = tmp[4+idt] = v[4]*sum1+v[9]*sum2+v[14]*sum3+ 2464e2b4712SSatish Balay v[19]*sum4+v[24]*sum5; 2474e2b4712SSatish Balay } 2484e2b4712SSatish Balay 2494e2b4712SSatish Balay ierr = ISRestoreIndices(isrow,&rout); CHKERRQ(ierr); 2504e2b4712SSatish Balay ierr = ISRestoreIndices(iscol,&cout); CHKERRQ(ierr); 251e1311b90SBarry Smith ierr = VecRestoreArray(bb,&b); CHKERRQ(ierr); 252e1311b90SBarry Smith ierr = VecRestoreArray(xx,&x); CHKERRQ(ierr); 25342015d63SBarry Smith PLogFlops(2*25*(a->nz) - 5*a->n); 2544e2b4712SSatish Balay PetscFunctionReturn(0); 2554e2b4712SSatish Balay } 2564e2b4712SSatish Balay 2574e2b4712SSatish Balay #undef __FUNC__ 2584e2b4712SSatish Balay #define __FUNC__ "MatSolve_SeqBAIJ_4" 2594e2b4712SSatish Balay int MatSolve_SeqBAIJ_4(Mat A,Vec bb,Vec xx) 2604e2b4712SSatish Balay { 2614e2b4712SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ *)A->data; 2624e2b4712SSatish Balay IS iscol=a->col,isrow=a->row; 2634e2b4712SSatish Balay int *r,*c,ierr,i,n=a->mbs,*vi,*ai=a->i,*aj=a->j,nz,idx,idt,idc,*rout,*cout; 2644e2b4712SSatish Balay int *diag = a->diag; 2653f1db9ecSBarry Smith MatScalar *aa=a->a,*v; 2663f1db9ecSBarry Smith Scalar *x,*b,sum1,sum2,sum3,sum4,x1,x2,x3,x4,*tmp; 2674e2b4712SSatish Balay 2684e2b4712SSatish Balay PetscFunctionBegin; 269e1311b90SBarry Smith ierr = VecGetArray(bb,&b); CHKERRQ(ierr); 270e1311b90SBarry Smith ierr = VecGetArray(xx,&x); CHKERRQ(ierr); 2714e2b4712SSatish Balay tmp = a->solve_work; 2724e2b4712SSatish Balay 2734e2b4712SSatish Balay ierr = ISGetIndices(isrow,&rout);CHKERRQ(ierr); r = rout; 2744e2b4712SSatish Balay ierr = ISGetIndices(iscol,&cout);CHKERRQ(ierr); c = cout + (n-1); 2754e2b4712SSatish Balay 2764e2b4712SSatish Balay /* forward solve the lower triangular */ 2774e2b4712SSatish Balay idx = 4*(*r++); 2784e2b4712SSatish Balay tmp[0] = b[idx]; tmp[1] = b[1+idx]; 2794e2b4712SSatish Balay tmp[2] = b[2+idx]; tmp[3] = b[3+idx]; 2804e2b4712SSatish Balay for ( i=1; i<n; i++ ) { 2814e2b4712SSatish Balay v = aa + 16*ai[i]; 2824e2b4712SSatish Balay vi = aj + ai[i]; 2834e2b4712SSatish Balay nz = diag[i] - ai[i]; 2844e2b4712SSatish Balay idx = 4*(*r++); 2854e2b4712SSatish Balay sum1 = b[idx];sum2 = b[1+idx];sum3 = b[2+idx];sum4 = b[3+idx]; 2864e2b4712SSatish Balay while (nz--) { 2874e2b4712SSatish Balay idx = 4*(*vi++); 2884e2b4712SSatish Balay x1 = tmp[idx];x2 = tmp[1+idx];x3 = tmp[2+idx];x4 = tmp[3+idx]; 2894e2b4712SSatish Balay sum1 -= v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 2904e2b4712SSatish Balay sum2 -= v[1]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 2914e2b4712SSatish Balay sum3 -= v[2]*x1 + v[6]*x2 + v[10]*x3 + v[14]*x4; 2924e2b4712SSatish Balay sum4 -= v[3]*x1 + v[7]*x2 + v[11]*x3 + v[15]*x4; 2934e2b4712SSatish Balay v += 16; 2944e2b4712SSatish Balay } 2954e2b4712SSatish Balay idx = 4*i; 2964e2b4712SSatish Balay tmp[idx] = sum1;tmp[1+idx] = sum2; 2974e2b4712SSatish Balay tmp[2+idx] = sum3;tmp[3+idx] = sum4; 2984e2b4712SSatish Balay } 2994e2b4712SSatish Balay /* backward solve the upper triangular */ 3004e2b4712SSatish Balay for ( i=n-1; i>=0; i-- ){ 3014e2b4712SSatish Balay v = aa + 16*diag[i] + 16; 3024e2b4712SSatish Balay vi = aj + diag[i] + 1; 3034e2b4712SSatish Balay nz = ai[i+1] - diag[i] - 1; 3044e2b4712SSatish Balay idt = 4*i; 3054e2b4712SSatish Balay sum1 = tmp[idt]; sum2 = tmp[1+idt]; 3064e2b4712SSatish Balay sum3 = tmp[2+idt];sum4 = tmp[3+idt]; 3074e2b4712SSatish Balay while (nz--) { 3084e2b4712SSatish Balay idx = 4*(*vi++); 3094e2b4712SSatish Balay x1 = tmp[idx]; x2 = tmp[1+idx]; 3104e2b4712SSatish Balay x3 = tmp[2+idx]; x4 = tmp[3+idx]; 3114e2b4712SSatish Balay sum1 -= v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 3124e2b4712SSatish Balay sum2 -= v[1]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 3134e2b4712SSatish Balay sum3 -= v[2]*x1 + v[6]*x2 + v[10]*x3 + v[14]*x4; 3144e2b4712SSatish Balay sum4 -= v[3]*x1 + v[7]*x2 + v[11]*x3 + v[15]*x4; 3154e2b4712SSatish Balay v += 16; 3164e2b4712SSatish Balay } 3174e2b4712SSatish Balay idc = 4*(*c--); 3184e2b4712SSatish Balay v = aa + 16*diag[i]; 3194e2b4712SSatish Balay x[idc] = tmp[idt] = v[0]*sum1+v[4]*sum2+v[8]*sum3+v[12]*sum4; 3204e2b4712SSatish Balay x[1+idc] = tmp[1+idt] = v[1]*sum1+v[5]*sum2+v[9]*sum3+v[13]*sum4; 3214e2b4712SSatish Balay x[2+idc] = tmp[2+idt] = v[2]*sum1+v[6]*sum2+v[10]*sum3+v[14]*sum4; 3224e2b4712SSatish Balay x[3+idc] = tmp[3+idt] = v[3]*sum1+v[7]*sum2+v[11]*sum3+v[15]*sum4; 3234e2b4712SSatish Balay } 3244e2b4712SSatish Balay 3254e2b4712SSatish Balay ierr = ISRestoreIndices(isrow,&rout); CHKERRQ(ierr); 3264e2b4712SSatish Balay ierr = ISRestoreIndices(iscol,&cout); CHKERRQ(ierr); 327e1311b90SBarry Smith ierr = VecRestoreArray(bb,&b); CHKERRQ(ierr); 328e1311b90SBarry Smith ierr = VecRestoreArray(xx,&x); CHKERRQ(ierr); 32942015d63SBarry Smith PLogFlops(2*16*(a->nz) - 4*a->n); 3304e2b4712SSatish Balay PetscFunctionReturn(0); 3314e2b4712SSatish Balay } 3320ef38995SBarry Smith 3330ef38995SBarry Smith 3344e2b4712SSatish Balay /* 3354e2b4712SSatish Balay Special case where the matrix was ILU(0) factored in the natural 3364e2b4712SSatish Balay ordering. This eliminates the need for the column and row permutation. 3374e2b4712SSatish Balay */ 3384e2b4712SSatish Balay #undef __FUNC__ 3394e2b4712SSatish Balay #define __FUNC__ "MatSolve_SeqBAIJ_4_NaturalOrdering" 3404e2b4712SSatish Balay int MatSolve_SeqBAIJ_4_NaturalOrdering(Mat A,Vec bb,Vec xx) 3414e2b4712SSatish Balay { 3424e2b4712SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ *)A->data; 34330d4dcafSBarry Smith int n=a->mbs,*ai=a->i,*aj=a->j; 34430d4dcafSBarry Smith int ierr,*diag = a->diag; 3453f1db9ecSBarry Smith MatScalar *aa=a->a; 34630d4dcafSBarry Smith Scalar *x,*b; 3474e2b4712SSatish Balay 3484e2b4712SSatish Balay PetscFunctionBegin; 349e1311b90SBarry Smith ierr = VecGetArray(bb,&b);CHKERRQ(ierr); 350e1311b90SBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 3514e2b4712SSatish Balay 3522853dc0eSBarry Smith #if defined(USE_FORTRAN_KERNEL_SOLVEBAIJBLAS) 3532853dc0eSBarry Smith { 3542853dc0eSBarry Smith static Scalar w[2000]; /* very BAD need to fix */ 3552853dc0eSBarry Smith fortransolvebaij4blas_(&n,x,ai,aj,diag,aa,b,w); 3562853dc0eSBarry Smith } 3572853dc0eSBarry Smith #elif defined(USE_FORTRAN_KERNEL_SOLVEBAIJ) 3582853dc0eSBarry Smith { 3592853dc0eSBarry Smith static Scalar w[2000]; /* very BAD need to fix */ 3602853dc0eSBarry Smith fortransolvebaij4_(&n,x,ai,aj,diag,aa,b,w); 3612853dc0eSBarry Smith } 3622853dc0eSBarry Smith #elif defined(USE_FORTRAN_KERNEL_SOLVEBAIJUNROLL) 3632853dc0eSBarry Smith fortransolvebaij4unroll_(&n,x,ai,aj,diag,aa,b); 364e1293385SBarry Smith #else 36530d4dcafSBarry Smith { 3663f1db9ecSBarry Smith Scalar sum1,sum2,sum3,sum4,x1,x2,x3,x4; 3673f1db9ecSBarry Smith MatScalar *v; 36830d4dcafSBarry Smith int jdx,idt,idx,nz,*vi,i; 369e1293385SBarry Smith 3704e2b4712SSatish Balay /* forward solve the lower triangular */ 3714e2b4712SSatish Balay idx = 0; 372e1293385SBarry Smith x[0] = b[0]; x[1] = b[1]; x[2] = b[2]; x[3] = b[3]; 3734e2b4712SSatish Balay for ( i=1; i<n; i++ ) { 3744e2b4712SSatish Balay v = aa + 16*ai[i]; 3754e2b4712SSatish Balay vi = aj + ai[i]; 3764e2b4712SSatish Balay nz = diag[i] - ai[i]; 377e1293385SBarry Smith idx += 4; 3784e2b4712SSatish Balay sum1 = b[idx];sum2 = b[1+idx];sum3 = b[2+idx];sum4 = b[3+idx]; 3794e2b4712SSatish Balay while (nz--) { 3804e2b4712SSatish Balay jdx = 4*(*vi++); 3814e2b4712SSatish Balay x1 = x[jdx];x2 = x[1+jdx];x3 = x[2+jdx];x4 = x[3+jdx]; 3824e2b4712SSatish Balay sum1 -= v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 3834e2b4712SSatish Balay sum2 -= v[1]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 3844e2b4712SSatish Balay sum3 -= v[2]*x1 + v[6]*x2 + v[10]*x3 + v[14]*x4; 3854e2b4712SSatish Balay sum4 -= v[3]*x1 + v[7]*x2 + v[11]*x3 + v[15]*x4; 3864e2b4712SSatish Balay v += 16; 3874e2b4712SSatish Balay } 3884e2b4712SSatish Balay x[idx] = sum1; 3894e2b4712SSatish Balay x[1+idx] = sum2; 3904e2b4712SSatish Balay x[2+idx] = sum3; 3914e2b4712SSatish Balay x[3+idx] = sum4; 3924e2b4712SSatish Balay } 3934e2b4712SSatish Balay /* backward solve the upper triangular */ 3944e2b4712SSatish Balay for ( i=n-1; i>=0; i-- ){ 3954e2b4712SSatish Balay v = aa + 16*diag[i] + 16; 3964e2b4712SSatish Balay vi = aj + diag[i] + 1; 3974e2b4712SSatish Balay nz = ai[i+1] - diag[i] - 1; 3984e2b4712SSatish Balay idt = 4*i; 3994e2b4712SSatish Balay sum1 = x[idt]; sum2 = x[1+idt]; 4004e2b4712SSatish Balay sum3 = x[2+idt];sum4 = x[3+idt]; 4014e2b4712SSatish Balay while (nz--) { 4024e2b4712SSatish Balay idx = 4*(*vi++); 4034e2b4712SSatish Balay x1 = x[idx]; x2 = x[1+idx];x3 = x[2+idx]; x4 = x[3+idx]; 4044e2b4712SSatish Balay sum1 -= v[0]*x1 + v[4]*x2 + v[8]*x3 + v[12]*x4; 4054e2b4712SSatish Balay sum2 -= v[1]*x1 + v[5]*x2 + v[9]*x3 + v[13]*x4; 4064e2b4712SSatish Balay sum3 -= v[2]*x1 + v[6]*x2 + v[10]*x3 + v[14]*x4; 4074e2b4712SSatish Balay sum4 -= v[3]*x1 + v[7]*x2 + v[11]*x3 + v[15]*x4; 4084e2b4712SSatish Balay v += 16; 4094e2b4712SSatish Balay } 4104e2b4712SSatish Balay v = aa + 16*diag[i]; 4114e2b4712SSatish Balay x[idt] = v[0]*sum1 + v[4]*sum2 + v[8]*sum3 + v[12]*sum4; 4124e2b4712SSatish Balay x[1+idt] = v[1]*sum1 + v[5]*sum2 + v[9]*sum3 + v[13]*sum4; 4134e2b4712SSatish Balay x[2+idt] = v[2]*sum1 + v[6]*sum2 + v[10]*sum3 + v[14]*sum4; 4144e2b4712SSatish Balay x[3+idt] = v[3]*sum1 + v[7]*sum2 + v[11]*sum3 + v[15]*sum4; 4154e2b4712SSatish Balay } 41630d4dcafSBarry Smith } 417e1293385SBarry Smith #endif 4184e2b4712SSatish Balay 419e1311b90SBarry Smith ierr = VecRestoreArray(bb,&b);CHKERRQ(ierr); 420e1311b90SBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 42142015d63SBarry Smith PLogFlops(2*16*(a->nz) - 4*a->n); 4224e2b4712SSatish Balay PetscFunctionReturn(0); 4234e2b4712SSatish Balay } 4244e2b4712SSatish Balay 425667159a5SBarry Smith #undef __FUNC__ 426667159a5SBarry Smith #define __FUNC__ "MatSolve_SeqBAIJ_5_NaturalOrdering" 427667159a5SBarry Smith int MatSolve_SeqBAIJ_5_NaturalOrdering(Mat A,Vec bb,Vec xx) 428667159a5SBarry Smith { 429667159a5SBarry Smith Mat_SeqBAIJ *a = (Mat_SeqBAIJ *)A->data; 430667159a5SBarry Smith int i,n=a->mbs,*vi,*ai=a->i,*aj=a->j,nz,idx,idt; 431667159a5SBarry Smith int ierr,*diag = a->diag,jdx; 4323f1db9ecSBarry Smith MatScalar *aa=a->a,*v; 4333f1db9ecSBarry Smith Scalar *x,*b,sum1,sum2,sum3,sum4,sum5,x1,x2,x3,x4,x5;; 434667159a5SBarry Smith 435667159a5SBarry Smith PetscFunctionBegin; 436667159a5SBarry Smith ierr = VecGetArray(bb,&b);CHKERRQ(ierr); 437667159a5SBarry Smith ierr = VecGetArray(xx,&x);CHKERRQ(ierr); 438667159a5SBarry Smith /* forward solve the lower triangular */ 439667159a5SBarry Smith idx = 0; 440667159a5SBarry Smith x[0] = b[idx]; x[1] = b[1+idx]; x[2] = b[2+idx]; x[3] = b[3+idx];x[4] = b[4+idx]; 441667159a5SBarry Smith for ( i=1; i<n; i++ ) { 442667159a5SBarry Smith v = aa + 25*ai[i]; 443667159a5SBarry Smith vi = aj + ai[i]; 444667159a5SBarry Smith nz = diag[i] - ai[i]; 445667159a5SBarry Smith idx = 5*i; 446667159a5SBarry Smith sum1 = b[idx];sum2 = b[1+idx];sum3 = b[2+idx];sum4 = b[3+idx];sum5 = b[4+idx]; 447667159a5SBarry Smith while (nz--) { 448667159a5SBarry Smith jdx = 5*(*vi++); 449667159a5SBarry Smith x1 = x[jdx];x2 = x[1+jdx];x3 = x[2+jdx];x4 = x[3+jdx];x5 = x[4+jdx]; 450667159a5SBarry Smith sum1 -= v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4 + v[20]*x5; 451667159a5SBarry Smith sum2 -= v[1]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4 + v[21]*x5; 452667159a5SBarry Smith sum3 -= v[2]*x1 + v[7]*x2 + v[12]*x3 + v[17]*x4 + v[22]*x5; 453667159a5SBarry Smith sum4 -= v[3]*x1 + v[8]*x2 + v[13]*x3 + v[18]*x4 + v[23]*x5; 454667159a5SBarry Smith sum5 -= v[4]*x1 + v[9]*x2 + v[14]*x3 + v[19]*x4 + v[24]*x5; 455667159a5SBarry Smith v += 25; 456667159a5SBarry Smith } 457667159a5SBarry Smith x[idx] = sum1; 458667159a5SBarry Smith x[1+idx] = sum2; 459667159a5SBarry Smith x[2+idx] = sum3; 460667159a5SBarry Smith x[3+idx] = sum4; 461667159a5SBarry Smith x[4+idx] = sum5; 462667159a5SBarry Smith } 463667159a5SBarry Smith /* backward solve the upper triangular */ 464667159a5SBarry Smith for ( i=n-1; i>=0; i-- ){ 465667159a5SBarry Smith v = aa + 25*diag[i] + 25; 466667159a5SBarry Smith vi = aj + diag[i] + 1; 467667159a5SBarry Smith nz = ai[i+1] - diag[i] - 1; 468667159a5SBarry Smith idt = 5*i; 469667159a5SBarry Smith sum1 = x[idt]; sum2 = x[1+idt]; 470667159a5SBarry Smith sum3 = x[2+idt];sum4 = x[3+idt]; sum5 = x[4+idt]; 471667159a5SBarry Smith while (nz--) { 472667159a5SBarry Smith idx = 5*(*vi++); 473667159a5SBarry Smith x1 = x[idx]; x2 = x[1+idx];x3 = x[2+idx]; x4 = x[3+idx]; x5 = x[4+idx]; 474667159a5SBarry Smith sum1 -= v[0]*x1 + v[5]*x2 + v[10]*x3 + v[15]*x4 + v[20]*x5; 475667159a5SBarry Smith sum2 -= v[1]*x1 + v[6]*x2 + v[11]*x3 + v[16]*x4 + v[21]*x5; 476667159a5SBarry Smith sum3 -= v[2]*x1 + v[7]*x2 + v[12]*x3 + v[17]*x4 + v[22]*x5; 477667159a5SBarry Smith sum4 -= v[3]*x1 + v[8]*x2 + v[13]*x3 + v[18]*x4 + v[23]*x5; 478667159a5SBarry Smith sum5 -= v[4]*x1 + v[9]*x2 + v[14]*x3 + v[19]*x4 + v[24]*x5; 479667159a5SBarry Smith v += 25; 480667159a5SBarry Smith } 481667159a5SBarry Smith v = aa + 25*diag[i]; 482667159a5SBarry Smith x[idt] = v[0]*sum1 + v[5]*sum2 + v[10]*sum3 + v[15]*sum4 + v[20]*sum5; 483667159a5SBarry Smith x[1+idt] = v[1]*sum1 + v[6]*sum2 + v[11]*sum3 + v[16]*sum4 + v[21]*sum5; 484667159a5SBarry Smith x[2+idt] = v[2]*sum1 + v[7]*sum2 + v[12]*sum3 + v[17]*sum4 + v[22]*sum5; 485667159a5SBarry Smith x[3+idt] = v[3]*sum1 + v[8]*sum2 + v[13]*sum3 + v[18]*sum4 + v[23]*sum5; 486667159a5SBarry Smith x[4+idt] = v[4]*sum1 + v[9]*sum2 + v[14]*sum3 + v[19]*sum4 + v[24]*sum5; 487667159a5SBarry Smith } 488667159a5SBarry Smith 489667159a5SBarry Smith ierr = VecRestoreArray(bb,&b);CHKERRQ(ierr); 490667159a5SBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 49142015d63SBarry Smith PLogFlops(2*25*(a->nz) - 5*a->n); 492667159a5SBarry Smith PetscFunctionReturn(0); 493667159a5SBarry Smith } 494667159a5SBarry Smith 4954e2b4712SSatish Balay 4964e2b4712SSatish Balay #undef __FUNC__ 4974e2b4712SSatish Balay #define __FUNC__ "MatSolve_SeqBAIJ_3" 4984e2b4712SSatish Balay int MatSolve_SeqBAIJ_3(Mat A,Vec bb,Vec xx) 4994e2b4712SSatish Balay { 5004e2b4712SSatish Balay Mat_SeqBAIJ *a=(Mat_SeqBAIJ *)A->data; 5014e2b4712SSatish Balay IS iscol=a->col,isrow=a->row; 5024e2b4712SSatish Balay int *r,*c,ierr,i,n=a->mbs,*vi,*ai=a->i,*aj=a->j,nz,idx,idt,idc,*rout,*cout; 5034e2b4712SSatish Balay int *diag = a->diag; 5043f1db9ecSBarry Smith MatScalar *aa=a->a,*v; 5053f1db9ecSBarry Smith Scalar *x,*b,sum1,sum2,sum3,x1,x2,x3,*tmp; 5064e2b4712SSatish Balay 5074e2b4712SSatish Balay PetscFunctionBegin; 508e1311b90SBarry Smith ierr = VecGetArray(bb,&b); CHKERRQ(ierr); 509e1311b90SBarry Smith ierr = VecGetArray(xx,&x); CHKERRQ(ierr); 5104e2b4712SSatish Balay tmp = a->solve_work; 5114e2b4712SSatish Balay 5124e2b4712SSatish Balay ierr = ISGetIndices(isrow,&rout);CHKERRQ(ierr); r = rout; 5134e2b4712SSatish Balay ierr = ISGetIndices(iscol,&cout);CHKERRQ(ierr); c = cout + (n-1); 5144e2b4712SSatish Balay 5154e2b4712SSatish Balay /* forward solve the lower triangular */ 5164e2b4712SSatish Balay idx = 3*(*r++); 5174e2b4712SSatish Balay tmp[0] = b[idx]; tmp[1] = b[1+idx]; tmp[2] = b[2+idx]; 5184e2b4712SSatish Balay for ( i=1; i<n; i++ ) { 5194e2b4712SSatish Balay v = aa + 9*ai[i]; 5204e2b4712SSatish Balay vi = aj + ai[i]; 5214e2b4712SSatish Balay nz = diag[i] - ai[i]; 5224e2b4712SSatish Balay idx = 3*(*r++); 5234e2b4712SSatish Balay sum1 = b[idx]; sum2 = b[1+idx]; sum3 = b[2+idx]; 5244e2b4712SSatish Balay while (nz--) { 5254e2b4712SSatish Balay idx = 3*(*vi++); 5264e2b4712SSatish Balay x1 = tmp[idx]; x2 = tmp[1+idx]; x3 = tmp[2+idx]; 5274e2b4712SSatish Balay sum1 -= v[0]*x1 + v[3]*x2 + v[6]*x3; 5284e2b4712SSatish Balay sum2 -= v[1]*x1 + v[4]*x2 + v[7]*x3; 5294e2b4712SSatish Balay sum3 -= v[2]*x1 + v[5]*x2 + v[8]*x3; 5304e2b4712SSatish Balay v += 9; 5314e2b4712SSatish Balay } 5324e2b4712SSatish Balay idx = 3*i; 5334e2b4712SSatish Balay tmp[idx] = sum1; tmp[1+idx] = sum2; tmp[2+idx] = sum3; 5344e2b4712SSatish Balay } 5354e2b4712SSatish Balay /* backward solve the upper triangular */ 5364e2b4712SSatish Balay for ( i=n-1; i>=0; i-- ){ 5374e2b4712SSatish Balay v = aa + 9*diag[i] + 9; 5384e2b4712SSatish Balay vi = aj + diag[i] + 1; 5394e2b4712SSatish Balay nz = ai[i+1] - diag[i] - 1; 5404e2b4712SSatish Balay idt = 3*i; 5414e2b4712SSatish Balay sum1 = tmp[idt]; sum2 = tmp[1+idt]; sum3 = tmp[2+idt]; 5424e2b4712SSatish Balay while (nz--) { 5434e2b4712SSatish Balay idx = 3*(*vi++); 5444e2b4712SSatish Balay x1 = tmp[idx]; x2 = tmp[1+idx]; x3 = tmp[2+idx]; 5454e2b4712SSatish Balay sum1 -= v[0]*x1 + v[3]*x2 + v[6]*x3; 5464e2b4712SSatish Balay sum2 -= v[1]*x1 + v[4]*x2 + v[7]*x3; 5474e2b4712SSatish Balay sum3 -= v[2]*x1 + v[5]*x2 + v[8]*x3; 5484e2b4712SSatish Balay v += 9; 5494e2b4712SSatish Balay } 5504e2b4712SSatish Balay idc = 3*(*c--); 5514e2b4712SSatish Balay v = aa + 9*diag[i]; 5524e2b4712SSatish Balay x[idc] = tmp[idt] = v[0]*sum1 + v[3]*sum2 + v[6]*sum3; 5534e2b4712SSatish Balay x[1+idc] = tmp[1+idt] = v[1]*sum1 + v[4]*sum2 + v[7]*sum3; 5544e2b4712SSatish Balay x[2+idc] = tmp[2+idt] = v[2]*sum1 + v[5]*sum2 + v[8]*sum3; 5554e2b4712SSatish Balay } 5564e2b4712SSatish Balay ierr = ISRestoreIndices(isrow,&rout); CHKERRQ(ierr); 5574e2b4712SSatish Balay ierr = ISRestoreIndices(iscol,&cout); CHKERRQ(ierr); 558e1311b90SBarry Smith ierr = VecRestoreArray(bb,&b);CHKERRQ(ierr); 559e1311b90SBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 56042015d63SBarry Smith PLogFlops(2*9*(a->nz) - 3*a->n); 5614e2b4712SSatish Balay PetscFunctionReturn(0); 5624e2b4712SSatish Balay } 5634e2b4712SSatish Balay 5644e2b4712SSatish Balay #undef __FUNC__ 5654e2b4712SSatish Balay #define __FUNC__ "MatSolve_SeqBAIJ_2" 5664e2b4712SSatish Balay int MatSolve_SeqBAIJ_2(Mat A,Vec bb,Vec xx) 5674e2b4712SSatish Balay { 5684e2b4712SSatish Balay Mat_SeqBAIJ *a=(Mat_SeqBAIJ *)A->data; 5694e2b4712SSatish Balay IS iscol=a->col,isrow=a->row; 5704e2b4712SSatish Balay int *r,*c,ierr,i,n=a->mbs,*vi,*ai=a->i,*aj=a->j,nz,idx,idt,idc,*rout,*cout; 5714e2b4712SSatish Balay int *diag = a->diag; 5723f1db9ecSBarry Smith MatScalar *aa=a->a,*v; 5733f1db9ecSBarry Smith Scalar *x,*b,sum1,sum2,x1,x2,*tmp; 5744e2b4712SSatish Balay 5754e2b4712SSatish Balay PetscFunctionBegin; 576e1311b90SBarry Smith ierr = VecGetArray(bb,&b); CHKERRQ(ierr); 577e1311b90SBarry Smith ierr = VecGetArray(xx,&x); CHKERRQ(ierr); 5784e2b4712SSatish Balay tmp = a->solve_work; 5794e2b4712SSatish Balay 5804e2b4712SSatish Balay ierr = ISGetIndices(isrow,&rout);CHKERRQ(ierr); r = rout; 5814e2b4712SSatish Balay ierr = ISGetIndices(iscol,&cout);CHKERRQ(ierr); c = cout + (n-1); 5824e2b4712SSatish Balay 5834e2b4712SSatish Balay /* forward solve the lower triangular */ 5844e2b4712SSatish Balay idx = 2*(*r++); 5854e2b4712SSatish Balay tmp[0] = b[idx]; tmp[1] = b[1+idx]; 5864e2b4712SSatish Balay for ( i=1; i<n; i++ ) { 5874e2b4712SSatish Balay v = aa + 4*ai[i]; 5884e2b4712SSatish Balay vi = aj + ai[i]; 5894e2b4712SSatish Balay nz = diag[i] - ai[i]; 5904e2b4712SSatish Balay idx = 2*(*r++); 5914e2b4712SSatish Balay sum1 = b[idx]; sum2 = b[1+idx]; 5924e2b4712SSatish Balay while (nz--) { 5934e2b4712SSatish Balay idx = 2*(*vi++); 5944e2b4712SSatish Balay x1 = tmp[idx]; x2 = tmp[1+idx]; 5954e2b4712SSatish Balay sum1 -= v[0]*x1 + v[2]*x2; 5964e2b4712SSatish Balay sum2 -= v[1]*x1 + v[3]*x2; 5974e2b4712SSatish Balay v += 4; 5984e2b4712SSatish Balay } 5994e2b4712SSatish Balay idx = 2*i; 6004e2b4712SSatish Balay tmp[idx] = sum1; tmp[1+idx] = sum2; 6014e2b4712SSatish Balay } 6024e2b4712SSatish Balay /* backward solve the upper triangular */ 6034e2b4712SSatish Balay for ( i=n-1; i>=0; i-- ){ 6044e2b4712SSatish Balay v = aa + 4*diag[i] + 4; 6054e2b4712SSatish Balay vi = aj + diag[i] + 1; 6064e2b4712SSatish Balay nz = ai[i+1] - diag[i] - 1; 6074e2b4712SSatish Balay idt = 2*i; 6084e2b4712SSatish Balay sum1 = tmp[idt]; sum2 = tmp[1+idt]; 6094e2b4712SSatish Balay while (nz--) { 6104e2b4712SSatish Balay idx = 2*(*vi++); 6114e2b4712SSatish Balay x1 = tmp[idx]; x2 = tmp[1+idx]; 6124e2b4712SSatish Balay sum1 -= v[0]*x1 + v[2]*x2; 6134e2b4712SSatish Balay sum2 -= v[1]*x1 + v[3]*x2; 6144e2b4712SSatish Balay v += 4; 6154e2b4712SSatish Balay } 6164e2b4712SSatish Balay idc = 2*(*c--); 6174e2b4712SSatish Balay v = aa + 4*diag[i]; 6184e2b4712SSatish Balay x[idc] = tmp[idt] = v[0]*sum1 + v[2]*sum2; 6194e2b4712SSatish Balay x[1+idc] = tmp[1+idt] = v[1]*sum1 + v[3]*sum2; 6204e2b4712SSatish Balay } 6214e2b4712SSatish Balay ierr = ISRestoreIndices(isrow,&rout); CHKERRQ(ierr); 6224e2b4712SSatish Balay ierr = ISRestoreIndices(iscol,&cout); CHKERRQ(ierr); 623e1311b90SBarry Smith ierr = VecRestoreArray(bb,&b); CHKERRQ(ierr); 624e1311b90SBarry Smith ierr = VecRestoreArray(xx,&x);CHKERRQ(ierr); 62542015d63SBarry Smith PLogFlops(2*4*(a->nz) - 2*a->n); 6264e2b4712SSatish Balay PetscFunctionReturn(0); 6274e2b4712SSatish Balay } 6284e2b4712SSatish Balay 6294e2b4712SSatish Balay #undef __FUNC__ 6304e2b4712SSatish Balay #define __FUNC__ "MatSolve_SeqBAIJ_1" 6314e2b4712SSatish Balay int MatSolve_SeqBAIJ_1(Mat A,Vec bb,Vec xx) 6324e2b4712SSatish Balay { 6334e2b4712SSatish Balay Mat_SeqBAIJ *a=(Mat_SeqBAIJ *)A->data; 6344e2b4712SSatish Balay IS iscol=a->col,isrow=a->row; 6354e2b4712SSatish Balay int *r,*c,ierr,i,n=a->mbs,*vi,*ai=a->i,*aj=a->j,nz,*rout,*cout; 6364e2b4712SSatish Balay int *diag = a->diag; 6373f1db9ecSBarry Smith MatScalar *aa=a->a,*v; 6383f1db9ecSBarry Smith Scalar *x,*b,sum1,*tmp; 6394e2b4712SSatish Balay 6404e2b4712SSatish Balay PetscFunctionBegin; 6414e2b4712SSatish Balay if (!n) PetscFunctionReturn(0); 6424e2b4712SSatish Balay 643e1311b90SBarry Smith ierr = VecGetArray(bb,&b); CHKERRQ(ierr); 644e1311b90SBarry Smith ierr = VecGetArray(xx,&x); CHKERRQ(ierr); 6454e2b4712SSatish Balay tmp = a->solve_work; 6464e2b4712SSatish Balay 6474e2b4712SSatish Balay ierr = ISGetIndices(isrow,&rout);CHKERRQ(ierr); r = rout; 6484e2b4712SSatish Balay ierr = ISGetIndices(iscol,&cout);CHKERRQ(ierr); c = cout + (n-1); 6494e2b4712SSatish Balay 6504e2b4712SSatish Balay /* forward solve the lower triangular */ 6514e2b4712SSatish Balay tmp[0] = b[*r++]; 6524e2b4712SSatish Balay for ( i=1; i<n; i++ ) { 6534e2b4712SSatish Balay v = aa + ai[i]; 6544e2b4712SSatish Balay vi = aj + ai[i]; 6554e2b4712SSatish Balay nz = diag[i] - ai[i]; 6564e2b4712SSatish Balay sum1 = b[*r++]; 6574e2b4712SSatish Balay while (nz--) { 6584e2b4712SSatish Balay sum1 -= (*v++)*tmp[*vi++]; 6594e2b4712SSatish Balay } 6604e2b4712SSatish Balay tmp[i] = sum1; 6614e2b4712SSatish Balay } 6624e2b4712SSatish Balay /* backward solve the upper triangular */ 6634e2b4712SSatish Balay for ( i=n-1; i>=0; i-- ){ 6644e2b4712SSatish Balay v = aa + diag[i] + 1; 6654e2b4712SSatish Balay vi = aj + diag[i] + 1; 6664e2b4712SSatish Balay nz = ai[i+1] - diag[i] - 1; 6674e2b4712SSatish Balay sum1 = tmp[i]; 6684e2b4712SSatish Balay while (nz--) { 6694e2b4712SSatish Balay sum1 -= (*v++)*tmp[*vi++]; 6704e2b4712SSatish Balay } 6714e2b4712SSatish Balay x[*c--] = tmp[i] = aa[diag[i]]*sum1; 6724e2b4712SSatish Balay } 6734e2b4712SSatish Balay 6744e2b4712SSatish Balay ierr = ISRestoreIndices(isrow,&rout); CHKERRQ(ierr); 6754e2b4712SSatish Balay ierr = ISRestoreIndices(iscol,&cout); CHKERRQ(ierr); 676e1311b90SBarry Smith ierr = VecRestoreArray(bb,&b); CHKERRQ(ierr); 677e1311b90SBarry Smith ierr = VecRestoreArray(xx,&x); CHKERRQ(ierr); 6784e2b4712SSatish Balay PLogFlops(2*1*(a->nz) - a->n); 6794e2b4712SSatish Balay PetscFunctionReturn(0); 6804e2b4712SSatish Balay } 6814e2b4712SSatish Balay 6824e2b4712SSatish Balay /* ----------------------------------------------------------------*/ 6834e2b4712SSatish Balay /* 6844e2b4712SSatish Balay This code is virtually identical to MatILUFactorSymbolic_SeqAIJ 6854e2b4712SSatish Balay except that the data structure of Mat_SeqAIJ is slightly different. 6864e2b4712SSatish Balay Not a good example of code reuse. 6874e2b4712SSatish Balay */ 688435faa5fSBarry Smith extern int MatMissingDiag_SeqBAIJ(Mat); 689435faa5fSBarry Smith 6904e2b4712SSatish Balay #undef __FUNC__ 6914e2b4712SSatish Balay #define __FUNC__ "MatILUFactorSymbolic_SeqBAIJ" 692435faa5fSBarry Smith int MatILUFactorSymbolic_SeqBAIJ(Mat A,IS isrow,IS iscol,MatILUInfo *info,Mat *fact) 6934e2b4712SSatish Balay { 6944e2b4712SSatish Balay Mat_SeqBAIJ *a = (Mat_SeqBAIJ *) A->data, *b; 6954e2b4712SSatish Balay IS isicol; 6964e2b4712SSatish Balay int *r,*ic, ierr, prow, n = a->mbs, *ai = a->i, *aj = a->j; 6974e2b4712SSatish Balay int *ainew,*ajnew, jmax,*fill, *xi, nz, *im,*ajfill,*flev; 698335d9088SBarry Smith int *dloc, idx, row,m,fm, nzf, nzi,len, realloc = 0, dcount = 0; 699435faa5fSBarry Smith int incrlev,nnz,i,bs = a->bs,bs2 = a->bs2, levels, diagonal_fill; 7004e2b4712SSatish Balay PetscTruth col_identity, row_identity; 701435faa5fSBarry Smith double f; 7024e2b4712SSatish Balay 7034e2b4712SSatish Balay PetscFunctionBegin; 704435faa5fSBarry Smith if (info) { 705435faa5fSBarry Smith f = info->fill; 706335d9088SBarry Smith levels = (int) info->levels; 707335d9088SBarry Smith diagonal_fill = (int) info->diagonal_fill; 708435faa5fSBarry Smith } else { 709435faa5fSBarry Smith f = 1.0; 710435faa5fSBarry Smith levels = 0; 711435faa5fSBarry Smith diagonal_fill = 0; 712435faa5fSBarry Smith } 713e51c0b9cSSatish Balay ierr = ISInvertPermutation(iscol,&isicol); CHKERRQ(ierr); 714e51c0b9cSSatish Balay 7154e2b4712SSatish Balay /* special case that simply copies fill pattern */ 7164e2b4712SSatish Balay PetscValidHeaderSpecific(isrow,IS_COOKIE); 7174e2b4712SSatish Balay PetscValidHeaderSpecific(iscol,IS_COOKIE); 718667159a5SBarry Smith ierr = ISIdentity(isrow,&row_identity); CHKERRQ(ierr); 719667159a5SBarry Smith ierr = ISIdentity(iscol,&col_identity); CHKERRQ(ierr); 7204e2b4712SSatish Balay if (levels == 0 && row_identity && col_identity) { 721e1293385SBarry Smith ierr = MatDuplicate_SeqBAIJ(A,MAT_DO_NOT_COPY_VALUES,fact); CHKERRQ(ierr); 7224e2b4712SSatish Balay (*fact)->factor = FACTOR_LU; 7234e2b4712SSatish Balay b = (Mat_SeqBAIJ *) (*fact)->data; 7244e2b4712SSatish Balay if (!b->diag) { 7254e2b4712SSatish Balay ierr = MatMarkDiag_SeqBAIJ(*fact); CHKERRQ(ierr); 7264e2b4712SSatish Balay } 727435faa5fSBarry Smith ierr = MatMissingDiag_SeqBAIJ(*fact); CHKERRQ(ierr); 7284e2b4712SSatish Balay b->row = isrow; 7294e2b4712SSatish Balay b->col = iscol; 730e51c0b9cSSatish Balay b->icol = isicol; 7314e2b4712SSatish Balay b->solve_work = (Scalar *) PetscMalloc((b->m+1+b->bs)*sizeof(Scalar));CHKPTRQ(b->solve_work); 7324e2b4712SSatish Balay /* 733667159a5SBarry Smith Blocksize 4 and 5 a special faster solver for ILU(0) factorization 7344e2b4712SSatish Balay with natural ordering 7354e2b4712SSatish Balay */ 7364e2b4712SSatish Balay if (b->bs == 4) { 737f830108cSBarry Smith (*fact)->ops->lufactornumeric = MatLUFactorNumeric_SeqBAIJ_4_NaturalOrdering; 738f830108cSBarry Smith (*fact)->ops->solve = MatSolve_SeqBAIJ_4_NaturalOrdering; 739*744db789SBarry Smith PLogInfo(A,"MatILUFactorSymbolic_SeqBAIJ:Using special natural ordering factor and solve BS=4\n"); 740667159a5SBarry Smith } else if (b->bs == 5) { 741667159a5SBarry Smith (*fact)->ops->lufactornumeric = MatLUFactorNumeric_SeqBAIJ_5_NaturalOrdering; 742667159a5SBarry Smith (*fact)->ops->solve = MatSolve_SeqBAIJ_5_NaturalOrdering; 743*744db789SBarry Smith PLogInfo( A,"MatILUFactorSymbolic_SeqBAIJ:Using special natural ordering factor and solve BS=5\n"); 7444e2b4712SSatish Balay } 7454e2b4712SSatish Balay PetscFunctionReturn(0); 7464e2b4712SSatish Balay } 7474e2b4712SSatish Balay 7484e2b4712SSatish Balay ierr = ISGetIndices(isrow,&r); CHKERRQ(ierr); 7494e2b4712SSatish Balay ierr = ISGetIndices(isicol,&ic); CHKERRQ(ierr); 7504e2b4712SSatish Balay 7514e2b4712SSatish Balay /* get new row pointers */ 7524e2b4712SSatish Balay ainew = (int *) PetscMalloc( (n+1)*sizeof(int) ); CHKPTRQ(ainew); 7534e2b4712SSatish Balay ainew[0] = 0; 7544e2b4712SSatish Balay /* don't know how many column pointers are needed so estimate */ 7554e2b4712SSatish Balay jmax = (int) (f*ai[n] + 1); 7564e2b4712SSatish Balay ajnew = (int *) PetscMalloc( (jmax)*sizeof(int) ); CHKPTRQ(ajnew); 7574e2b4712SSatish Balay /* ajfill is level of fill for each fill entry */ 7584e2b4712SSatish Balay ajfill = (int *) PetscMalloc( (jmax)*sizeof(int) ); CHKPTRQ(ajfill); 7594e2b4712SSatish Balay /* fill is a linked list of nonzeros in active row */ 7604e2b4712SSatish Balay fill = (int *) PetscMalloc( (n+1)*sizeof(int)); CHKPTRQ(fill); 7614e2b4712SSatish Balay /* im is level for each filled value */ 7624e2b4712SSatish Balay im = (int *) PetscMalloc( (n+1)*sizeof(int)); CHKPTRQ(im); 7634e2b4712SSatish Balay /* dloc is location of diagonal in factor */ 7644e2b4712SSatish Balay dloc = (int *) PetscMalloc( (n+1)*sizeof(int)); CHKPTRQ(dloc); 7654e2b4712SSatish Balay dloc[0] = 0; 7664e2b4712SSatish Balay for ( prow=0; prow<n; prow++ ) { 767435faa5fSBarry Smith 768435faa5fSBarry Smith /* copy prow into linked list */ 7694e2b4712SSatish Balay nzf = nz = ai[r[prow]+1] - ai[r[prow]]; 7704e2b4712SSatish Balay if (!nz) SETERRQ(PETSC_ERR_MAT_LU_ZRPVT,1,"Empty row in matrix"); 7714e2b4712SSatish Balay xi = aj + ai[r[prow]]; 7724e2b4712SSatish Balay fill[n] = n; 773435faa5fSBarry Smith fill[prow] = -1; /* marker for diagonal entry */ 7744e2b4712SSatish Balay while (nz--) { 7754e2b4712SSatish Balay fm = n; 7764e2b4712SSatish Balay idx = ic[*xi++]; 7774e2b4712SSatish Balay do { 7784e2b4712SSatish Balay m = fm; 7794e2b4712SSatish Balay fm = fill[m]; 7804e2b4712SSatish Balay } while (fm < idx); 7814e2b4712SSatish Balay fill[m] = idx; 7824e2b4712SSatish Balay fill[idx] = fm; 7834e2b4712SSatish Balay im[idx] = 0; 7844e2b4712SSatish Balay } 785435faa5fSBarry Smith 786435faa5fSBarry Smith /* make sure diagonal entry is included */ 787435faa5fSBarry Smith if (diagonal_fill && fill[prow] == -1) { 788435faa5fSBarry Smith fm = n; 789435faa5fSBarry Smith while (fill[fm] < prow) fm = fill[fm]; 790435faa5fSBarry Smith fill[prow] = fill[fm]; /* insert diagonal into linked list */ 791435faa5fSBarry Smith fill[fm] = prow; 792435faa5fSBarry Smith im[prow] = 0; 793435faa5fSBarry Smith nzf++; 794335d9088SBarry Smith dcount++; 795435faa5fSBarry Smith } 796435faa5fSBarry Smith 7974e2b4712SSatish Balay nzi = 0; 7984e2b4712SSatish Balay row = fill[n]; 7994e2b4712SSatish Balay while ( row < prow ) { 8004e2b4712SSatish Balay incrlev = im[row] + 1; 8014e2b4712SSatish Balay nz = dloc[row]; 802435faa5fSBarry Smith xi = ajnew + ainew[row] + nz + 1; 8034e2b4712SSatish Balay flev = ajfill + ainew[row] + nz + 1; 8044e2b4712SSatish Balay nnz = ainew[row+1] - ainew[row] - nz - 1; 8054e2b4712SSatish Balay fm = row; 8064e2b4712SSatish Balay while (nnz-- > 0) { 8074e2b4712SSatish Balay idx = *xi++; 8084e2b4712SSatish Balay if (*flev + incrlev > levels) { 8094e2b4712SSatish Balay flev++; 8104e2b4712SSatish Balay continue; 8114e2b4712SSatish Balay } 8124e2b4712SSatish Balay do { 8134e2b4712SSatish Balay m = fm; 8144e2b4712SSatish Balay fm = fill[m]; 8154e2b4712SSatish Balay } while (fm < idx); 8164e2b4712SSatish Balay if (fm != idx) { 8174e2b4712SSatish Balay im[idx] = *flev + incrlev; 8184e2b4712SSatish Balay fill[m] = idx; 8194e2b4712SSatish Balay fill[idx] = fm; 8204e2b4712SSatish Balay fm = idx; 8214e2b4712SSatish Balay nzf++; 822ecf371e4SBarry Smith } else { 8234e2b4712SSatish Balay if (im[idx] > *flev + incrlev) im[idx] = *flev+incrlev; 8244e2b4712SSatish Balay } 8254e2b4712SSatish Balay flev++; 8264e2b4712SSatish Balay } 8274e2b4712SSatish Balay row = fill[row]; 8284e2b4712SSatish Balay nzi++; 8294e2b4712SSatish Balay } 8304e2b4712SSatish Balay /* copy new filled row into permanent storage */ 8314e2b4712SSatish Balay ainew[prow+1] = ainew[prow] + nzf; 8324e2b4712SSatish Balay if (ainew[prow+1] > jmax) { 833ecf371e4SBarry Smith 834ecf371e4SBarry Smith /* estimate how much additional space we will need */ 835ecf371e4SBarry Smith /* use the strategy suggested by David Hysom <hysom@perch-t.icase.edu> */ 836ecf371e4SBarry Smith /* just double the memory each time */ 837ecf371e4SBarry Smith int maxadd = jmax; 838ecf371e4SBarry Smith /* maxadd = (int) (((f*ai[n]+1)*(n-prow+5))/n); */ 8394e2b4712SSatish Balay if (maxadd < nzf) maxadd = (n-prow)*(nzf+1); 8404e2b4712SSatish Balay jmax += maxadd; 841ecf371e4SBarry Smith 842ecf371e4SBarry Smith /* allocate a longer ajnew and ajfill */ 8434e2b4712SSatish Balay xi = (int *) PetscMalloc( jmax*sizeof(int) );CHKPTRQ(xi); 8444e2b4712SSatish Balay PetscMemcpy(xi,ajnew,ainew[prow]*sizeof(int)); 8454e2b4712SSatish Balay PetscFree(ajnew); 8464e2b4712SSatish Balay ajnew = xi; 8474e2b4712SSatish Balay xi = (int *) PetscMalloc( jmax*sizeof(int) );CHKPTRQ(xi); 8484e2b4712SSatish Balay PetscMemcpy(xi,ajfill,ainew[prow]*sizeof(int)); 8494e2b4712SSatish Balay PetscFree(ajfill); 8504e2b4712SSatish Balay ajfill = xi; 851ecf371e4SBarry Smith realloc++; /* count how many reallocations are needed */ 8524e2b4712SSatish Balay } 8534e2b4712SSatish Balay xi = ajnew + ainew[prow]; 8544e2b4712SSatish Balay flev = ajfill + ainew[prow]; 8554e2b4712SSatish Balay dloc[prow] = nzi; 8564e2b4712SSatish Balay fm = fill[n]; 8574e2b4712SSatish Balay while (nzf--) { 8584e2b4712SSatish Balay *xi++ = fm; 8594e2b4712SSatish Balay *flev++ = im[fm]; 8604e2b4712SSatish Balay fm = fill[fm]; 8614e2b4712SSatish Balay } 862435faa5fSBarry Smith /* make sure row has diagonal entry */ 863435faa5fSBarry Smith if (ajnew[ainew[prow]+dloc[prow]] != prow) { 864435faa5fSBarry Smith SETERRQ1(PETSC_ERR_MAT_LU_ZRPVT,1,"Row %d has missing diagonal in factored matrix\n\ 865435faa5fSBarry Smith try running with -pc_ilu_nonzeros_along_diagonal or -pc_ilu_diagonal_fill",prow); 866435faa5fSBarry Smith } 8674e2b4712SSatish Balay } 8684e2b4712SSatish Balay PetscFree(ajfill); 8694e2b4712SSatish Balay ierr = ISRestoreIndices(isrow,&r); CHKERRQ(ierr); 8704e2b4712SSatish Balay ierr = ISRestoreIndices(isicol,&ic); CHKERRQ(ierr); 8714e2b4712SSatish Balay PetscFree(fill); PetscFree(im); 8724e2b4712SSatish Balay 8734e2b4712SSatish Balay { 8744e2b4712SSatish Balay double af = ((double)ainew[n])/((double)ai[n]); 875981c4779SBarry Smith PLogInfo(A,"MatILUFactorSymbolic_SeqBAIJ:Reallocs %d Fill ratio:given %g needed %g\n", 8764e2b4712SSatish Balay realloc,f,af); 877981c4779SBarry Smith PLogInfo(A,"MatILUFactorSymbolic_SeqBAIJ:Run with -pc_ilu_fill %g or use \n",af); 878981c4779SBarry Smith PLogInfo(A,"MatILUFactorSymbolic_SeqBAIJ:PCILUSetFill(pc,%g);\n",af); 879981c4779SBarry Smith PLogInfo(A,"MatILUFactorSymbolic_SeqBAIJ:for best performance.\n"); 880335d9088SBarry Smith if (diagonal_fill) { 881335d9088SBarry Smith PLogInfo(A,"MatILUFactorSymbolic_SeqBAIJ:Detected and replace %d missing diagonals",dcount); 882335d9088SBarry Smith } 8834e2b4712SSatish Balay } 8844e2b4712SSatish Balay 8854e2b4712SSatish Balay /* put together the new matrix */ 8864e2b4712SSatish Balay ierr = MatCreateSeqBAIJ(A->comm,bs,bs*n,bs*n,0,PETSC_NULL,fact);CHKERRQ(ierr); 887fa6007c9SSatish Balay PLogObjectParent(*fact,isicol); 8884e2b4712SSatish Balay b = (Mat_SeqBAIJ *) (*fact)->data; 8894e2b4712SSatish Balay PetscFree(b->imax); 8904e2b4712SSatish Balay b->singlemalloc = 0; 8913f1db9ecSBarry Smith len = bs2*ainew[n]*sizeof(MatScalar); 8924e2b4712SSatish Balay /* the next line frees the default space generated by the Create() */ 8934e2b4712SSatish Balay PetscFree(b->a); PetscFree(b->ilen); 8943f1db9ecSBarry Smith b->a = (MatScalar *) PetscMalloc( len ); CHKPTRQ(b->a); 8954e2b4712SSatish Balay b->j = ajnew; 8964e2b4712SSatish Balay b->i = ainew; 8974e2b4712SSatish Balay for ( i=0; i<n; i++ ) dloc[i] += ainew[i]; 8984e2b4712SSatish Balay b->diag = dloc; 8994e2b4712SSatish Balay b->ilen = 0; 9004e2b4712SSatish Balay b->imax = 0; 9014e2b4712SSatish Balay b->row = isrow; 9024e2b4712SSatish Balay b->col = iscol; 903e51c0b9cSSatish Balay b->icol = isicol; 9044e2b4712SSatish Balay b->solve_work = (Scalar *) PetscMalloc( (bs*n+bs)*sizeof(Scalar));CHKPTRQ(b->solve_work); 9054e2b4712SSatish Balay /* In b structure: Free imax, ilen, old a, old j. 9064e2b4712SSatish Balay Allocate dloc, solve_work, new a, new j */ 9074e2b4712SSatish Balay PLogObjectMemory(*fact,(ainew[n]-n)*(sizeof(int))+bs2*ainew[n]*sizeof(Scalar)); 9084e2b4712SSatish Balay b->maxnz = b->nz = ainew[n]; 9094e2b4712SSatish Balay (*fact)->factor = FACTOR_LU; 9104e2b4712SSatish Balay 9114e2b4712SSatish Balay (*fact)->info.factor_mallocs = realloc; 9124e2b4712SSatish Balay (*fact)->info.fill_ratio_given = f; 9134e2b4712SSatish Balay (*fact)->info.fill_ratio_needed = ((double)ainew[n])/((double)ai[prow]); 9144e2b4712SSatish Balay 9154e2b4712SSatish Balay PetscFunctionReturn(0); 9164e2b4712SSatish Balay } 9174e2b4712SSatish Balay 9184e2b4712SSatish Balay 9194e2b4712SSatish Balay 9204e2b4712SSatish Balay 921