xref: /petsc/src/mat/impls/dense/mpi/mpidense.c (revision 126e4e939130f03a43a4dc3f6770c316f1ae98a5)
1be1d678aSKris Buschelman 
2ed3cc1f0SBarry Smith /*
3ed3cc1f0SBarry Smith    Basic functions for basic parallel dense matrices.
4ed3cc1f0SBarry Smith */
5ed3cc1f0SBarry Smith 
6c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h>    /*I   "petscmat.h"  I*/
78949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h>
8baa3c1c6SHong Zhang #include <petscblaslapack.h>
98965ea79SLois Curfman McInnes 
10ab92ecdeSBarry Smith /*@
11ab92ecdeSBarry Smith 
12ab92ecdeSBarry Smith       MatDenseGetLocalMatrix - For a MATMPIDENSE or MATSEQDENSE matrix returns the sequential
13ab92ecdeSBarry Smith               matrix that represents the operator. For sequential matrices it returns itself.
14ab92ecdeSBarry Smith 
15ab92ecdeSBarry Smith     Input Parameter:
16ab92ecdeSBarry Smith .      A - the Seq or MPI dense matrix
17ab92ecdeSBarry Smith 
18ab92ecdeSBarry Smith     Output Parameter:
19ab92ecdeSBarry Smith .      B - the inner matrix
20ab92ecdeSBarry Smith 
218e6c10adSSatish Balay     Level: intermediate
228e6c10adSSatish Balay 
23ab92ecdeSBarry Smith @*/
24ab92ecdeSBarry Smith PetscErrorCode MatDenseGetLocalMatrix(Mat A,Mat *B)
25ab92ecdeSBarry Smith {
26ab92ecdeSBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
27ace3abfcSBarry Smith   PetscBool      flg;
28ab92ecdeSBarry Smith 
29ab92ecdeSBarry Smith   PetscFunctionBegin;
30d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
31d5ea218eSStefano Zampini   PetscValidPointer(B,2);
329566063dSJacob Faibussowitsch   PetscCall(PetscObjectBaseTypeCompare((PetscObject)A,MATMPIDENSE,&flg));
332205254eSKarl Rupp   if (flg) *B = mat->A;
34f140bc17SStefano Zampini   else {
359566063dSJacob Faibussowitsch     PetscCall(PetscObjectBaseTypeCompare((PetscObject)A,MATSEQDENSE,&flg));
3628b400f6SJacob Faibussowitsch     PetscCheck(flg,PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Not for matrix type %s",((PetscObject)A)->type_name);
37f140bc17SStefano Zampini     *B = A;
38f140bc17SStefano Zampini   }
39ab92ecdeSBarry Smith   PetscFunctionReturn(0);
40ab92ecdeSBarry Smith }
41ab92ecdeSBarry Smith 
42a76f77c3SStefano Zampini PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s)
43a76f77c3SStefano Zampini {
44a76f77c3SStefano Zampini   Mat_MPIDense   *Amat = (Mat_MPIDense*)A->data;
45a76f77c3SStefano Zampini   Mat_MPIDense   *Bmat = (Mat_MPIDense*)B->data;
46a76f77c3SStefano Zampini 
47a76f77c3SStefano Zampini   PetscFunctionBegin;
489566063dSJacob Faibussowitsch   PetscCall(MatCopy(Amat->A,Bmat->A,s));
49a76f77c3SStefano Zampini   PetscFunctionReturn(0);
50a76f77c3SStefano Zampini }
51a76f77c3SStefano Zampini 
522f605a99SJose E. Roman PetscErrorCode MatShift_MPIDense(Mat A,PetscScalar alpha)
532f605a99SJose E. Roman {
542f605a99SJose E. Roman   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
552f605a99SJose E. Roman   PetscInt       j,lda,rstart = A->rmap->rstart,rend = A->rmap->rend,rend2;
562f605a99SJose E. Roman   PetscScalar    *v;
572f605a99SJose E. Roman 
582f605a99SJose E. Roman   PetscFunctionBegin;
592f605a99SJose E. Roman   PetscCall(MatDenseGetArray(mat->A,&v));
602f605a99SJose E. Roman   PetscCall(MatDenseGetLDA(mat->A,&lda));
612f605a99SJose E. Roman   rend2 = PetscMin(rend,A->cmap->N);
622f605a99SJose E. Roman   if (rend2>rstart) {
632f605a99SJose E. Roman     for (j=rstart; j<rend2; j++) v[j-rstart+j*lda] += alpha;
642f605a99SJose E. Roman     PetscCall(PetscLogFlops(rend2-rstart));
652f605a99SJose E. Roman   }
662f605a99SJose E. Roman   PetscCall(MatDenseRestoreArray(mat->A,&v));
672f605a99SJose E. Roman   PetscFunctionReturn(0);
682f605a99SJose E. Roman }
692f605a99SJose E. Roman 
70ba8c8a56SBarry Smith PetscErrorCode MatGetRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
71ba8c8a56SBarry Smith {
72ba8c8a56SBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
73d0f46423SBarry Smith   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
74ba8c8a56SBarry Smith 
75ba8c8a56SBarry Smith   PetscFunctionBegin;
76aed4548fSBarry Smith   PetscCheck(row >= rstart && row < rend,PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
77ba8c8a56SBarry Smith   lrow = row - rstart;
789566063dSJacob Faibussowitsch   PetscCall(MatGetRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v));
79ba8c8a56SBarry Smith   PetscFunctionReturn(0);
80ba8c8a56SBarry Smith }
81ba8c8a56SBarry Smith 
82637a0070SStefano Zampini PetscErrorCode MatRestoreRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
83ba8c8a56SBarry Smith {
84637a0070SStefano Zampini   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
85637a0070SStefano Zampini   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
86ba8c8a56SBarry Smith 
87ba8c8a56SBarry Smith   PetscFunctionBegin;
88aed4548fSBarry Smith   PetscCheck(row >= rstart && row < rend,PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
89637a0070SStefano Zampini   lrow = row - rstart;
909566063dSJacob Faibussowitsch   PetscCall(MatRestoreRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v));
91ba8c8a56SBarry Smith   PetscFunctionReturn(0);
92ba8c8a56SBarry Smith }
93ba8c8a56SBarry Smith 
9411bd1e4dSLisandro Dalcin PetscErrorCode  MatGetDiagonalBlock_MPIDense(Mat A,Mat *a)
950de54da6SSatish Balay {
960de54da6SSatish Balay   Mat_MPIDense   *mdn = (Mat_MPIDense*)A->data;
97d0f46423SBarry Smith   PetscInt       m = A->rmap->n,rstart = A->rmap->rstart;
9887828ca2SBarry Smith   PetscScalar    *array;
990de54da6SSatish Balay   MPI_Comm       comm;
1004b6ae80fSStefano Zampini   PetscBool      flg;
10111bd1e4dSLisandro Dalcin   Mat            B;
1020de54da6SSatish Balay 
1030de54da6SSatish Balay   PetscFunctionBegin;
1049566063dSJacob Faibussowitsch   PetscCall(MatHasCongruentLayouts(A,&flg));
10528b400f6SJacob Faibussowitsch   PetscCheck(flg,PETSC_COMM_SELF,PETSC_ERR_SUP,"Only square matrices supported.");
1069566063dSJacob Faibussowitsch   PetscCall(PetscObjectQuery((PetscObject)A,"DiagonalBlock",(PetscObject*)&B));
107616b8fbbSStefano Zampini   if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */
1084b6ae80fSStefano Zampini 
1099566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A,MATSEQDENSECUDA,&flg));
11028b400f6SJacob Faibussowitsch     PetscCheck(!flg,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature",MATSEQDENSECUDA);
1119566063dSJacob Faibussowitsch     PetscCall(PetscObjectGetComm((PetscObject)(mdn->A),&comm));
1129566063dSJacob Faibussowitsch     PetscCall(MatCreate(comm,&B));
1139566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B,m,m,m,m));
1149566063dSJacob Faibussowitsch     PetscCall(MatSetType(B,((PetscObject)mdn->A)->type_name));
1159566063dSJacob Faibussowitsch     PetscCall(MatDenseGetArrayRead(mdn->A,(const PetscScalar**)&array));
1169566063dSJacob Faibussowitsch     PetscCall(MatSeqDenseSetPreallocation(B,array+m*rstart));
1179566063dSJacob Faibussowitsch     PetscCall(MatDenseRestoreArrayRead(mdn->A,(const PetscScalar**)&array));
1189566063dSJacob Faibussowitsch     PetscCall(PetscObjectCompose((PetscObject)A,"DiagonalBlock",(PetscObject)B));
11911bd1e4dSLisandro Dalcin     *a   = B;
1209566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&B));
1212205254eSKarl Rupp   } else *a = B;
1220de54da6SSatish Balay   PetscFunctionReturn(0);
1230de54da6SSatish Balay }
1240de54da6SSatish Balay 
12513f74950SBarry Smith PetscErrorCode MatSetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],const PetscScalar v[],InsertMode addv)
1268965ea79SLois Curfman McInnes {
12739b7565bSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)mat->data;
128d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
129ace3abfcSBarry Smith   PetscBool      roworiented = A->roworiented;
1308965ea79SLois Curfman McInnes 
1313a40ed3dSBarry Smith   PetscFunctionBegin;
1328965ea79SLois Curfman McInnes   for (i=0; i<m; i++) {
1335ef9f2a5SBarry Smith     if (idxm[i] < 0) continue;
13408401ef6SPierre Jolivet     PetscCheck(idxm[i] < mat->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
1358965ea79SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
1368965ea79SLois Curfman McInnes       row = idxm[i] - rstart;
13739b7565bSBarry Smith       if (roworiented) {
1389566063dSJacob Faibussowitsch         PetscCall(MatSetValues(A->A,1,&row,n,idxn,v+i*n,addv));
1393a40ed3dSBarry Smith       } else {
1408965ea79SLois Curfman McInnes         for (j=0; j<n; j++) {
1415ef9f2a5SBarry Smith           if (idxn[j] < 0) continue;
14208401ef6SPierre Jolivet           PetscCheck(idxn[j] < mat->cmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
1439566063dSJacob Faibussowitsch           PetscCall(MatSetValues(A->A,1,&row,1,&idxn[j],v+i+j*m,addv));
14439b7565bSBarry Smith         }
1458965ea79SLois Curfman McInnes       }
1462205254eSKarl Rupp     } else if (!A->donotstash) {
1475080c13bSMatthew G Knepley       mat->assembled = PETSC_FALSE;
14839b7565bSBarry Smith       if (roworiented) {
1499566063dSJacob Faibussowitsch         PetscCall(MatStashValuesRow_Private(&mat->stash,idxm[i],n,idxn,v+i*n,PETSC_FALSE));
150d36fbae8SSatish Balay       } else {
1519566063dSJacob Faibussowitsch         PetscCall(MatStashValuesCol_Private(&mat->stash,idxm[i],n,idxn,v+i,m,PETSC_FALSE));
15239b7565bSBarry Smith       }
153b49de8d1SLois Curfman McInnes     }
154b49de8d1SLois Curfman McInnes   }
1553a40ed3dSBarry Smith   PetscFunctionReturn(0);
156b49de8d1SLois Curfman McInnes }
157b49de8d1SLois Curfman McInnes 
15813f74950SBarry Smith PetscErrorCode MatGetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],PetscScalar v[])
159b49de8d1SLois Curfman McInnes {
160b49de8d1SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
161d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
162b49de8d1SLois Curfman McInnes 
1633a40ed3dSBarry Smith   PetscFunctionBegin;
164b49de8d1SLois Curfman McInnes   for (i=0; i<m; i++) {
16554c59aa7SJacob Faibussowitsch     if (idxm[i] < 0) continue; /* negative row */
16654c59aa7SJacob Faibussowitsch     PetscCheck(idxm[i] < mat->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
167b49de8d1SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
168b49de8d1SLois Curfman McInnes       row = idxm[i] - rstart;
169b49de8d1SLois Curfman McInnes       for (j=0; j<n; j++) {
17054c59aa7SJacob Faibussowitsch         if (idxn[j] < 0) continue; /* negative column */
17154c59aa7SJacob Faibussowitsch         PetscCheck(idxn[j] < mat->cmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
1729566063dSJacob Faibussowitsch         PetscCall(MatGetValues(mdn->A,1,&row,1,&idxn[j],v+i*n+j));
173b49de8d1SLois Curfman McInnes       }
174e7e72b3dSBarry Smith     } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only local values currently supported");
1758965ea79SLois Curfman McInnes   }
1763a40ed3dSBarry Smith   PetscFunctionReturn(0);
1778965ea79SLois Curfman McInnes }
1788965ea79SLois Curfman McInnes 
17949a6ff4bSBarry Smith static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A,PetscInt *lda)
18049a6ff4bSBarry Smith {
18149a6ff4bSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
18249a6ff4bSBarry Smith 
18349a6ff4bSBarry Smith   PetscFunctionBegin;
1849566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,lda));
18549a6ff4bSBarry Smith   PetscFunctionReturn(0);
18649a6ff4bSBarry Smith }
18749a6ff4bSBarry Smith 
188ad16ce7aSStefano Zampini static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A,PetscInt lda)
189ad16ce7aSStefano Zampini {
190ad16ce7aSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
19117359960SJose E. Roman   PetscBool      iscuda;
192ad16ce7aSStefano Zampini 
193ad16ce7aSStefano Zampini   PetscFunctionBegin;
19417359960SJose E. Roman   if (!a->A) {
19528b400f6SJacob Faibussowitsch     PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1969566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(A->rmap));
1979566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(A->cmap));
1989566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF,&a->A));
1999566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->A));
2009566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(a->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N));
2019566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda));
2029566063dSJacob Faibussowitsch     PetscCall(MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE));
20317359960SJose E. Roman   }
2049566063dSJacob Faibussowitsch   PetscCall(MatDenseSetLDA(a->A,lda));
205ad16ce7aSStefano Zampini   PetscFunctionReturn(0);
206ad16ce7aSStefano Zampini }
207ad16ce7aSStefano Zampini 
208637a0070SStefano Zampini static PetscErrorCode MatDenseGetArray_MPIDense(Mat A,PetscScalar **array)
209ff14e315SSatish Balay {
210ff14e315SSatish Balay   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
211ff14e315SSatish Balay 
2123a40ed3dSBarry Smith   PetscFunctionBegin;
21328b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2149566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(a->A,array));
2153a40ed3dSBarry Smith   PetscFunctionReturn(0);
216ff14e315SSatish Balay }
217ff14e315SSatish Balay 
218637a0070SStefano Zampini static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A,const PetscScalar **array)
2198572280aSBarry Smith {
2208572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2218572280aSBarry Smith 
2228572280aSBarry Smith   PetscFunctionBegin;
22328b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2249566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,array));
2258572280aSBarry Smith   PetscFunctionReturn(0);
2268572280aSBarry Smith }
2278572280aSBarry Smith 
2286947451fSStefano Zampini static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A,PetscScalar **array)
2296947451fSStefano Zampini {
2306947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2316947451fSStefano Zampini 
2326947451fSStefano Zampini   PetscFunctionBegin;
23328b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2349566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(a->A,array));
2356947451fSStefano Zampini   PetscFunctionReturn(0);
2366947451fSStefano Zampini }
2376947451fSStefano Zampini 
238637a0070SStefano Zampini static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A,const PetscScalar *array)
239d3042a70SBarry Smith {
240d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
241d3042a70SBarry Smith 
242d3042a70SBarry Smith   PetscFunctionBegin;
24328b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
24428b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2459566063dSJacob Faibussowitsch   PetscCall(MatDensePlaceArray(a->A,array));
246d3042a70SBarry Smith   PetscFunctionReturn(0);
247d3042a70SBarry Smith }
248d3042a70SBarry Smith 
249d3042a70SBarry Smith static PetscErrorCode MatDenseResetArray_MPIDense(Mat A)
250d3042a70SBarry Smith {
251d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
252d3042a70SBarry Smith 
253d3042a70SBarry Smith   PetscFunctionBegin;
25428b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
25528b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2569566063dSJacob Faibussowitsch   PetscCall(MatDenseResetArray(a->A));
257d3042a70SBarry Smith   PetscFunctionReturn(0);
258d3042a70SBarry Smith }
259d3042a70SBarry Smith 
260d5ea218eSStefano Zampini static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A,const PetscScalar *array)
261d5ea218eSStefano Zampini {
262d5ea218eSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
263d5ea218eSStefano Zampini 
264d5ea218eSStefano Zampini   PetscFunctionBegin;
26528b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
26628b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2679566063dSJacob Faibussowitsch   PetscCall(MatDenseReplaceArray(a->A,array));
268d5ea218eSStefano Zampini   PetscFunctionReturn(0);
269d5ea218eSStefano Zampini }
270d5ea218eSStefano Zampini 
2717dae84e0SHong Zhang static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B)
272ca3fa75bSLois Curfman McInnes {
273ca3fa75bSLois Curfman McInnes   Mat_MPIDense      *mat  = (Mat_MPIDense*)A->data,*newmatd;
274637a0070SStefano Zampini   PetscInt          lda,i,j,rstart,rend,nrows,ncols,Ncols,nlrows,nlcols;
2755d0c19d7SBarry Smith   const PetscInt    *irow,*icol;
276637a0070SStefano Zampini   const PetscScalar *v;
277637a0070SStefano Zampini   PetscScalar       *bv;
278ca3fa75bSLois Curfman McInnes   Mat               newmat;
2794aa3045dSJed Brown   IS                iscol_local;
28042a884f0SBarry Smith   MPI_Comm          comm_is,comm_mat;
281ca3fa75bSLois Curfman McInnes 
282ca3fa75bSLois Curfman McInnes   PetscFunctionBegin;
2839566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm_mat));
2849566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)iscol,&comm_is));
28508401ef6SPierre Jolivet   PetscCheck(comm_mat == comm_is,PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"IS communicator must match matrix communicator");
28642a884f0SBarry Smith 
2879566063dSJacob Faibussowitsch   PetscCall(ISAllGather(iscol,&iscol_local));
2889566063dSJacob Faibussowitsch   PetscCall(ISGetIndices(isrow,&irow));
2899566063dSJacob Faibussowitsch   PetscCall(ISGetIndices(iscol_local,&icol));
2909566063dSJacob Faibussowitsch   PetscCall(ISGetLocalSize(isrow,&nrows));
2919566063dSJacob Faibussowitsch   PetscCall(ISGetLocalSize(iscol,&ncols));
2929566063dSJacob Faibussowitsch   PetscCall(ISGetSize(iscol,&Ncols)); /* global number of columns, size of iscol_local */
293ca3fa75bSLois Curfman McInnes 
294ca3fa75bSLois Curfman McInnes   /* No parallel redistribution currently supported! Should really check each index set
2957eba5e9cSLois Curfman McInnes      to comfirm that it is OK.  ... Currently supports only submatrix same partitioning as
2967eba5e9cSLois Curfman McInnes      original matrix! */
297ca3fa75bSLois Curfman McInnes 
2989566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(A,&nlrows,&nlcols));
2999566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRange(A,&rstart,&rend));
300ca3fa75bSLois Curfman McInnes 
301ca3fa75bSLois Curfman McInnes   /* Check submatrix call */
302ca3fa75bSLois Curfman McInnes   if (scall == MAT_REUSE_MATRIX) {
303e32f2f54SBarry Smith     /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */
3047eba5e9cSLois Curfman McInnes     /* Really need to test rows and column sizes! */
305ca3fa75bSLois Curfman McInnes     newmat = *B;
306ca3fa75bSLois Curfman McInnes   } else {
307ca3fa75bSLois Curfman McInnes     /* Create and fill new matrix */
3089566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&newmat));
3099566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(newmat,nrows,ncols,PETSC_DECIDE,Ncols));
3109566063dSJacob Faibussowitsch     PetscCall(MatSetType(newmat,((PetscObject)A)->type_name));
3119566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(newmat,NULL));
312ca3fa75bSLois Curfman McInnes   }
313ca3fa75bSLois Curfman McInnes 
314ca3fa75bSLois Curfman McInnes   /* Now extract the data pointers and do the copy, column at a time */
315ca3fa75bSLois Curfman McInnes   newmatd = (Mat_MPIDense*)newmat->data;
3169566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(newmatd->A,&bv));
3179566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(mat->A,&v));
3189566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(mat->A,&lda));
3194aa3045dSJed Brown   for (i=0; i<Ncols; i++) {
320637a0070SStefano Zampini     const PetscScalar *av = v + lda*icol[i];
321ca3fa75bSLois Curfman McInnes     for (j=0; j<nrows; j++) {
3227eba5e9cSLois Curfman McInnes       *bv++ = av[irow[j] - rstart];
323ca3fa75bSLois Curfman McInnes     }
324ca3fa75bSLois Curfman McInnes   }
3259566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(mat->A,&v));
3269566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(newmatd->A,&bv));
327ca3fa75bSLois Curfman McInnes 
328ca3fa75bSLois Curfman McInnes   /* Assemble the matrices so that the correct flags are set */
3299566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(newmat,MAT_FINAL_ASSEMBLY));
3309566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(newmat,MAT_FINAL_ASSEMBLY));
331ca3fa75bSLois Curfman McInnes 
332ca3fa75bSLois Curfman McInnes   /* Free work space */
3339566063dSJacob Faibussowitsch   PetscCall(ISRestoreIndices(isrow,&irow));
3349566063dSJacob Faibussowitsch   PetscCall(ISRestoreIndices(iscol_local,&icol));
3359566063dSJacob Faibussowitsch   PetscCall(ISDestroy(&iscol_local));
336ca3fa75bSLois Curfman McInnes   *B   = newmat;
337ca3fa75bSLois Curfman McInnes   PetscFunctionReturn(0);
338ca3fa75bSLois Curfman McInnes }
339ca3fa75bSLois Curfman McInnes 
340637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A,PetscScalar **array)
341ff14e315SSatish Balay {
34273a71a0fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
34373a71a0fSBarry Smith 
3443a40ed3dSBarry Smith   PetscFunctionBegin;
3459566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(a->A,array));
3463a40ed3dSBarry Smith   PetscFunctionReturn(0);
347ff14e315SSatish Balay }
348ff14e315SSatish Balay 
349637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A,const PetscScalar **array)
3508572280aSBarry Smith {
3518572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3528572280aSBarry Smith 
3538572280aSBarry Smith   PetscFunctionBegin;
3549566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,array));
3558572280aSBarry Smith   PetscFunctionReturn(0);
3568572280aSBarry Smith }
3578572280aSBarry Smith 
3586947451fSStefano Zampini PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A,PetscScalar **array)
3596947451fSStefano Zampini {
3606947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3616947451fSStefano Zampini 
3626947451fSStefano Zampini   PetscFunctionBegin;
3639566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(a->A,array));
3646947451fSStefano Zampini   PetscFunctionReturn(0);
3656947451fSStefano Zampini }
3666947451fSStefano Zampini 
367dfbe8321SBarry Smith PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat,MatAssemblyType mode)
3688965ea79SLois Curfman McInnes {
36939ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
37013f74950SBarry Smith   PetscInt       nstash,reallocs;
3718965ea79SLois Curfman McInnes 
3723a40ed3dSBarry Smith   PetscFunctionBegin;
3734067683fSStefano Zampini   if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(0);
3748965ea79SLois Curfman McInnes 
3759566063dSJacob Faibussowitsch   PetscCall(MatStashScatterBegin_Private(mat,&mat->stash,mat->rmap->range));
3769566063dSJacob Faibussowitsch   PetscCall(MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs));
3779566063dSJacob Faibussowitsch   PetscCall(PetscInfo(mdn->A,"Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n",nstash,reallocs));
3783a40ed3dSBarry Smith   PetscFunctionReturn(0);
3798965ea79SLois Curfman McInnes }
3808965ea79SLois Curfman McInnes 
381dfbe8321SBarry Smith PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat,MatAssemblyType mode)
3828965ea79SLois Curfman McInnes {
38339ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn=(Mat_MPIDense*)mat->data;
38413f74950SBarry Smith   PetscInt       i,*row,*col,flg,j,rstart,ncols;
38513f74950SBarry Smith   PetscMPIInt    n;
38687828ca2SBarry Smith   PetscScalar    *val;
3878965ea79SLois Curfman McInnes 
3883a40ed3dSBarry Smith   PetscFunctionBegin;
389910cf402Sprj-   if (!mdn->donotstash && !mat->nooffprocentries) {
3908965ea79SLois Curfman McInnes     /*  wait on receives */
3917ef1d9bdSSatish Balay     while (1) {
3929566063dSJacob Faibussowitsch       PetscCall(MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg));
3937ef1d9bdSSatish Balay       if (!flg) break;
3948965ea79SLois Curfman McInnes 
3957ef1d9bdSSatish Balay       for (i=0; i<n;) {
3967ef1d9bdSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
3972205254eSKarl Rupp         for (j=i,rstart=row[j]; j<n; j++) {
3982205254eSKarl Rupp           if (row[j] != rstart) break;
3992205254eSKarl Rupp         }
4007ef1d9bdSSatish Balay         if (j < n) ncols = j-i;
4017ef1d9bdSSatish Balay         else       ncols = n-i;
4027ef1d9bdSSatish Balay         /* Now assemble all these values with a single function call */
4039566063dSJacob Faibussowitsch         PetscCall(MatSetValues_MPIDense(mat,1,row+i,ncols,col+i,val+i,mat->insertmode));
4047ef1d9bdSSatish Balay         i    = j;
4058965ea79SLois Curfman McInnes       }
4067ef1d9bdSSatish Balay     }
4079566063dSJacob Faibussowitsch     PetscCall(MatStashScatterEnd_Private(&mat->stash));
408910cf402Sprj-   }
4098965ea79SLois Curfman McInnes 
4109566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(mdn->A,mode));
4119566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(mdn->A,mode));
4123a40ed3dSBarry Smith   PetscFunctionReturn(0);
4138965ea79SLois Curfman McInnes }
4148965ea79SLois Curfman McInnes 
415dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_MPIDense(Mat A)
4168965ea79SLois Curfman McInnes {
41739ddd567SLois Curfman McInnes   Mat_MPIDense   *l = (Mat_MPIDense*)A->data;
4183a40ed3dSBarry Smith 
4193a40ed3dSBarry Smith   PetscFunctionBegin;
4209566063dSJacob Faibussowitsch   PetscCall(MatZeroEntries(l->A));
4213a40ed3dSBarry Smith   PetscFunctionReturn(0);
4228965ea79SLois Curfman McInnes }
4238965ea79SLois Curfman McInnes 
424637a0070SStefano Zampini PetscErrorCode MatZeroRows_MPIDense(Mat A,PetscInt n,const PetscInt rows[],PetscScalar diag,Vec x,Vec b)
4258965ea79SLois Curfman McInnes {
42639ddd567SLois Curfman McInnes   Mat_MPIDense      *l = (Mat_MPIDense*)A->data;
427637a0070SStefano Zampini   PetscInt          i,len,*lrows;
428637a0070SStefano Zampini 
429637a0070SStefano Zampini   PetscFunctionBegin;
430637a0070SStefano Zampini   /* get locally owned rows */
4319566063dSJacob Faibussowitsch   PetscCall(PetscLayoutMapLocal(A->rmap,n,rows,&len,&lrows,NULL));
432637a0070SStefano Zampini   /* fix right hand side if needed */
433637a0070SStefano Zampini   if (x && b) {
43497b48c8fSBarry Smith     const PetscScalar *xx;
43597b48c8fSBarry Smith     PetscScalar       *bb;
4368965ea79SLois Curfman McInnes 
4379566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(x, &xx));
4389566063dSJacob Faibussowitsch     PetscCall(VecGetArrayWrite(b, &bb));
439637a0070SStefano Zampini     for (i=0;i<len;++i) bb[lrows[i]] = diag*xx[lrows[i]];
4409566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(x, &xx));
4419566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayWrite(b, &bb));
44297b48c8fSBarry Smith   }
4439566063dSJacob Faibussowitsch   PetscCall(MatZeroRows(l->A,len,lrows,0.0,NULL,NULL));
444e2eb51b1SBarry Smith   if (diag != 0.0) {
445637a0070SStefano Zampini     Vec d;
446b9679d65SBarry Smith 
4479566063dSJacob Faibussowitsch     PetscCall(MatCreateVecs(A,NULL,&d));
4489566063dSJacob Faibussowitsch     PetscCall(VecSet(d,diag));
4499566063dSJacob Faibussowitsch     PetscCall(MatDiagonalSet(A,d,INSERT_VALUES));
4509566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&d));
451b9679d65SBarry Smith   }
4529566063dSJacob Faibussowitsch   PetscCall(PetscFree(lrows));
4533a40ed3dSBarry Smith   PetscFunctionReturn(0);
4548965ea79SLois Curfman McInnes }
4558965ea79SLois Curfman McInnes 
456cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat,Vec,Vec);
457cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat,Vec,Vec,Vec);
458cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat,Vec,Vec);
459cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat,Vec,Vec,Vec);
460cc2e6a90SBarry Smith 
461dfbe8321SBarry Smith PetscErrorCode MatMult_MPIDense(Mat mat,Vec xx,Vec yy)
4628965ea79SLois Curfman McInnes {
46339ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
464637a0070SStefano Zampini   const PetscScalar *ax;
465637a0070SStefano Zampini   PetscScalar       *ay;
466d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
467c456f294SBarry Smith 
4683a40ed3dSBarry Smith   PetscFunctionBegin;
4696f08ad05SPierre Jolivet   if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
4709566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(xx,&ax,&axmtype));
4719566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype));
4729566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE));
4739566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE));
4749566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(mdn->lvec,&ay));
4759566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(xx,&ax));
4769566063dSJacob Faibussowitsch   PetscCall((*mdn->A->ops->mult)(mdn->A,mdn->lvec,yy));
4773a40ed3dSBarry Smith   PetscFunctionReturn(0);
4788965ea79SLois Curfman McInnes }
4798965ea79SLois Curfman McInnes 
480dfbe8321SBarry Smith PetscErrorCode MatMultAdd_MPIDense(Mat mat,Vec xx,Vec yy,Vec zz)
4818965ea79SLois Curfman McInnes {
48239ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
483637a0070SStefano Zampini   const PetscScalar *ax;
484637a0070SStefano Zampini   PetscScalar       *ay;
485d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
486c456f294SBarry Smith 
4873a40ed3dSBarry Smith   PetscFunctionBegin;
4886f08ad05SPierre Jolivet   if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
4899566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(xx,&ax,&axmtype));
4909566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype));
4919566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE));
4929566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE));
4939566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(mdn->lvec,&ay));
4949566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(xx,&ax));
4959566063dSJacob Faibussowitsch   PetscCall((*mdn->A->ops->multadd)(mdn->A,mdn->lvec,yy,zz));
4963a40ed3dSBarry Smith   PetscFunctionReturn(0);
4978965ea79SLois Curfman McInnes }
4988965ea79SLois Curfman McInnes 
499dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_MPIDense(Mat A,Vec xx,Vec yy)
500096963f5SLois Curfman McInnes {
501096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
502637a0070SStefano Zampini   const PetscScalar *ax;
503637a0070SStefano Zampini   PetscScalar       *ay;
504d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
505096963f5SLois Curfman McInnes 
5063a40ed3dSBarry Smith   PetscFunctionBegin;
5076f08ad05SPierre Jolivet   if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
5089566063dSJacob Faibussowitsch   PetscCall(VecSet(yy,0.0));
5099566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->multtranspose)(a->A,xx,a->lvec));
5109566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype));
5119566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(yy,&ay,&aymtype));
5129566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM));
5139566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM));
5149566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(a->lvec,&ax));
5159566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(yy,&ay));
5163a40ed3dSBarry Smith   PetscFunctionReturn(0);
517096963f5SLois Curfman McInnes }
518096963f5SLois Curfman McInnes 
519dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A,Vec xx,Vec yy,Vec zz)
520096963f5SLois Curfman McInnes {
521096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
522637a0070SStefano Zampini   const PetscScalar *ax;
523637a0070SStefano Zampini   PetscScalar       *ay;
524d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
525096963f5SLois Curfman McInnes 
5263a40ed3dSBarry Smith   PetscFunctionBegin;
5276f08ad05SPierre Jolivet   if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
5289566063dSJacob Faibussowitsch   PetscCall(VecCopy(yy,zz));
5299566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->multtranspose)(a->A,xx,a->lvec));
5309566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype));
5319566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(zz,&ay,&aymtype));
5329566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM));
5339566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM));
5349566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(a->lvec,&ax));
5359566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(zz,&ay));
5363a40ed3dSBarry Smith   PetscFunctionReturn(0);
537096963f5SLois Curfman McInnes }
538096963f5SLois Curfman McInnes 
539dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_MPIDense(Mat A,Vec v)
5408965ea79SLois Curfman McInnes {
54139ddd567SLois Curfman McInnes   Mat_MPIDense      *a    = (Mat_MPIDense*)A->data;
542637a0070SStefano Zampini   PetscInt          lda,len,i,n,m = A->rmap->n,radd;
54387828ca2SBarry Smith   PetscScalar       *x,zero = 0.0;
544637a0070SStefano Zampini   const PetscScalar *av;
545ed3cc1f0SBarry Smith 
5463a40ed3dSBarry Smith   PetscFunctionBegin;
5479566063dSJacob Faibussowitsch   PetscCall(VecSet(v,zero));
5489566063dSJacob Faibussowitsch   PetscCall(VecGetArray(v,&x));
5499566063dSJacob Faibussowitsch   PetscCall(VecGetSize(v,&n));
55008401ef6SPierre Jolivet   PetscCheck(n == A->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Nonconforming mat and vec");
551d0f46423SBarry Smith   len  = PetscMin(a->A->rmap->n,a->A->cmap->n);
552d0f46423SBarry Smith   radd = A->rmap->rstart*m;
5539566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&av));
5549566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
55544cd7ae7SLois Curfman McInnes   for (i=0; i<len; i++) {
556637a0070SStefano Zampini     x[i] = av[radd + i*lda + i];
557096963f5SLois Curfman McInnes   }
5589566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&av));
5599566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(v,&x));
5603a40ed3dSBarry Smith   PetscFunctionReturn(0);
5618965ea79SLois Curfman McInnes }
5628965ea79SLois Curfman McInnes 
563dfbe8321SBarry Smith PetscErrorCode MatDestroy_MPIDense(Mat mat)
5648965ea79SLois Curfman McInnes {
5653501a2bdSLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
566ed3cc1f0SBarry Smith 
5673a40ed3dSBarry Smith   PetscFunctionBegin;
568aa482453SBarry Smith #if defined(PETSC_USE_LOG)
569c0aa6a63SJacob Faibussowitsch   PetscLogObjectState((PetscObject)mat,"Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT,mat->rmap->N,mat->cmap->N);
5708965ea79SLois Curfman McInnes #endif
5719566063dSJacob Faibussowitsch   PetscCall(MatStashDestroy_Private(&mat->stash));
57228b400f6SJacob Faibussowitsch   PetscCheck(!mdn->vecinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
57328b400f6SJacob Faibussowitsch   PetscCheck(!mdn->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
5749566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&mdn->A));
5759566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&mdn->lvec));
5769566063dSJacob Faibussowitsch   PetscCall(PetscSFDestroy(&mdn->Mvctx));
5779566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&mdn->cvec));
5789566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&mdn->cmat));
57901b82886SBarry Smith 
5809566063dSJacob Faibussowitsch   PetscCall(PetscFree(mat->data));
5819566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)mat,NULL));
5828baccfbdSHong Zhang 
5839566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",NULL));
5849566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",NULL));
5859566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",NULL));
5869566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",NULL));
5879566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",NULL));
5889566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",NULL));
5899566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",NULL));
5909566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",NULL));
5919566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",NULL));
5929566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",NULL));
5939566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",NULL));
5949566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpiaij_mpidense_C",NULL));
5959566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpiaij_C",NULL));
5968baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
5979566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",NULL));
5988baccfbdSHong Zhang #endif
599d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
6009566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",NULL));
601d24d4204SJose E. Roman #endif
6029566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",NULL));
6039566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",NULL));
6049566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",NULL));
6056718818eSStefano Zampini #if defined (PETSC_HAVE_CUDA)
6069566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",NULL));
6079566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",NULL));
6086718818eSStefano Zampini #endif
6099566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",NULL));
6109566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",NULL));
6119566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",NULL));
6129566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",NULL));
6139566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",NULL));
6149566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",NULL));
6159566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",NULL));
6169566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",NULL));
6179566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",NULL));
6189566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",NULL));
6193a40ed3dSBarry Smith   PetscFunctionReturn(0);
6208965ea79SLois Curfman McInnes }
62139ddd567SLois Curfman McInnes 
62252c5f739Sprj- PETSC_INTERN PetscErrorCode MatView_SeqDense(Mat,PetscViewer);
62352c5f739Sprj- 
6249804daf3SBarry Smith #include <petscdraw.h>
6256849ba73SBarry Smith static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
6268965ea79SLois Curfman McInnes {
62739ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
628616b8fbbSStefano Zampini   PetscMPIInt       rank;
62919fd82e9SBarry Smith   PetscViewerType   vtype;
630ace3abfcSBarry Smith   PetscBool         iascii,isdraw;
631b0a32e0cSBarry Smith   PetscViewer       sviewer;
632f3ef73ceSBarry Smith   PetscViewerFormat format;
6338965ea79SLois Curfman McInnes 
6343a40ed3dSBarry Smith   PetscFunctionBegin;
6359566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat),&rank));
6369566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii));
6379566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw));
63832077d6dSBarry Smith   if (iascii) {
6399566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetType(viewer,&vtype));
6409566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetFormat(viewer,&format));
641456192e2SBarry Smith     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
6424e220ebcSLois Curfman McInnes       MatInfo info;
6439566063dSJacob Faibussowitsch       PetscCall(MatGetInfo(mat,MAT_LOCAL,&info));
6449566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPushSynchronized(viewer));
6459566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIISynchronizedPrintf(viewer,"  [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n",rank,mat->rmap->n,(PetscInt)info.nz_used,(PetscInt)info.nz_allocated,(PetscInt)info.memory));
6469566063dSJacob Faibussowitsch       PetscCall(PetscViewerFlush(viewer));
6479566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPopSynchronized(viewer));
6486f08ad05SPierre Jolivet       if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx,viewer));
6493a40ed3dSBarry Smith       PetscFunctionReturn(0);
650fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
6513a40ed3dSBarry Smith       PetscFunctionReturn(0);
6528965ea79SLois Curfman McInnes     }
653f1af5d2fSBarry Smith   } else if (isdraw) {
654b0a32e0cSBarry Smith     PetscDraw draw;
655ace3abfcSBarry Smith     PetscBool isnull;
656f1af5d2fSBarry Smith 
6579566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawGetDraw(viewer,0,&draw));
6589566063dSJacob Faibussowitsch     PetscCall(PetscDrawIsNull(draw,&isnull));
659f1af5d2fSBarry Smith     if (isnull) PetscFunctionReturn(0);
660f1af5d2fSBarry Smith   }
66177ed5343SBarry Smith 
6627da1fb6eSBarry Smith   {
6638965ea79SLois Curfman McInnes     /* assemble the entire matrix onto first processor. */
6648965ea79SLois Curfman McInnes     Mat         A;
665d0f46423SBarry Smith     PetscInt    M = mat->rmap->N,N = mat->cmap->N,m,row,i,nz;
666ba8c8a56SBarry Smith     PetscInt    *cols;
667ba8c8a56SBarry Smith     PetscScalar *vals;
6688965ea79SLois Curfman McInnes 
6699566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)mat),&A));
670dd400576SPatrick Sanan     if (rank == 0) {
6719566063dSJacob Faibussowitsch       PetscCall(MatSetSizes(A,M,N,M,N));
6723a40ed3dSBarry Smith     } else {
6739566063dSJacob Faibussowitsch       PetscCall(MatSetSizes(A,0,0,M,N));
6748965ea79SLois Curfman McInnes     }
6757adad957SLisandro Dalcin     /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */
6769566063dSJacob Faibussowitsch     PetscCall(MatSetType(A,MATMPIDENSE));
6779566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(A,NULL));
6789566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)mat,(PetscObject)A));
6798965ea79SLois Curfman McInnes 
68039ddd567SLois Curfman McInnes     /* Copy the matrix ... This isn't the most efficient means,
68139ddd567SLois Curfman McInnes        but it's quick for now */
68251022da4SBarry Smith     A->insertmode = INSERT_VALUES;
6832205254eSKarl Rupp 
6842205254eSKarl Rupp     row = mat->rmap->rstart;
6852205254eSKarl Rupp     m   = mdn->A->rmap->n;
6868965ea79SLois Curfman McInnes     for (i=0; i<m; i++) {
6879566063dSJacob Faibussowitsch       PetscCall(MatGetRow_MPIDense(mat,row,&nz,&cols,&vals));
6889566063dSJacob Faibussowitsch       PetscCall(MatSetValues_MPIDense(A,1,&row,nz,cols,vals,INSERT_VALUES));
6899566063dSJacob Faibussowitsch       PetscCall(MatRestoreRow_MPIDense(mat,row,&nz,&cols,&vals));
69039ddd567SLois Curfman McInnes       row++;
6918965ea79SLois Curfman McInnes     }
6928965ea79SLois Curfman McInnes 
6939566063dSJacob Faibussowitsch     PetscCall(MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY));
6949566063dSJacob Faibussowitsch     PetscCall(MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY));
6959566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetSubViewer(viewer,PETSC_COMM_SELF,&sviewer));
696dd400576SPatrick Sanan     if (rank == 0) {
6979566063dSJacob Faibussowitsch       PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense*)(A->data))->A,((PetscObject)mat)->name));
6989566063dSJacob Faibussowitsch       PetscCall(MatView_SeqDense(((Mat_MPIDense*)(A->data))->A,sviewer));
6998965ea79SLois Curfman McInnes     }
7009566063dSJacob Faibussowitsch     PetscCall(PetscViewerRestoreSubViewer(viewer,PETSC_COMM_SELF,&sviewer));
7019566063dSJacob Faibussowitsch     PetscCall(PetscViewerFlush(viewer));
7029566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&A));
7038965ea79SLois Curfman McInnes   }
7043a40ed3dSBarry Smith   PetscFunctionReturn(0);
7058965ea79SLois Curfman McInnes }
7068965ea79SLois Curfman McInnes 
707dfbe8321SBarry Smith PetscErrorCode MatView_MPIDense(Mat mat,PetscViewer viewer)
7088965ea79SLois Curfman McInnes {
709ace3abfcSBarry Smith   PetscBool      iascii,isbinary,isdraw,issocket;
7108965ea79SLois Curfman McInnes 
711433994e6SBarry Smith   PetscFunctionBegin;
7129566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii));
7139566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary));
7149566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERSOCKET,&issocket));
7159566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw));
7160f5bd95cSBarry Smith 
71732077d6dSBarry Smith   if (iascii || issocket || isdraw) {
7189566063dSJacob Faibussowitsch     PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat,viewer));
7190f5bd95cSBarry Smith   } else if (isbinary) {
7209566063dSJacob Faibussowitsch     PetscCall(MatView_Dense_Binary(mat,viewer));
72111aeaf0aSBarry Smith   }
7223a40ed3dSBarry Smith   PetscFunctionReturn(0);
7238965ea79SLois Curfman McInnes }
7248965ea79SLois Curfman McInnes 
725dfbe8321SBarry Smith PetscErrorCode MatGetInfo_MPIDense(Mat A,MatInfoType flag,MatInfo *info)
7268965ea79SLois Curfman McInnes {
7273501a2bdSLois Curfman McInnes   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
7283501a2bdSLois Curfman McInnes   Mat            mdn  = mat->A;
7293966268fSBarry Smith   PetscLogDouble isend[5],irecv[5];
7308965ea79SLois Curfman McInnes 
7313a40ed3dSBarry Smith   PetscFunctionBegin;
7324e220ebcSLois Curfman McInnes   info->block_size = 1.0;
7332205254eSKarl Rupp 
7349566063dSJacob Faibussowitsch   PetscCall(MatGetInfo(mdn,MAT_LOCAL,info));
7352205254eSKarl Rupp 
7364e220ebcSLois Curfman McInnes   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
7374e220ebcSLois Curfman McInnes   isend[3] = info->memory;  isend[4] = info->mallocs;
7388965ea79SLois Curfman McInnes   if (flag == MAT_LOCAL) {
7394e220ebcSLois Curfman McInnes     info->nz_used      = isend[0];
7404e220ebcSLois Curfman McInnes     info->nz_allocated = isend[1];
7414e220ebcSLois Curfman McInnes     info->nz_unneeded  = isend[2];
7424e220ebcSLois Curfman McInnes     info->memory       = isend[3];
7434e220ebcSLois Curfman McInnes     info->mallocs      = isend[4];
7448965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_MAX) {
7451c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_MAX,PetscObjectComm((PetscObject)A)));
7462205254eSKarl Rupp 
7474e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7484e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7494e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7504e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7514e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7528965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_SUM) {
7531c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_SUM,PetscObjectComm((PetscObject)A)));
7542205254eSKarl Rupp 
7554e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7564e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7574e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7584e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7594e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7608965ea79SLois Curfman McInnes   }
7614e220ebcSLois Curfman McInnes   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
7624e220ebcSLois Curfman McInnes   info->fill_ratio_needed = 0;
7634e220ebcSLois Curfman McInnes   info->factor_mallocs    = 0;
7643a40ed3dSBarry Smith   PetscFunctionReturn(0);
7658965ea79SLois Curfman McInnes }
7668965ea79SLois Curfman McInnes 
767ace3abfcSBarry Smith PetscErrorCode MatSetOption_MPIDense(Mat A,MatOption op,PetscBool flg)
7688965ea79SLois Curfman McInnes {
76939ddd567SLois Curfman McInnes   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
7708965ea79SLois Curfman McInnes 
7713a40ed3dSBarry Smith   PetscFunctionBegin;
77212c028f9SKris Buschelman   switch (op) {
773512a5fc5SBarry Smith   case MAT_NEW_NONZERO_LOCATIONS:
77412c028f9SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
77512c028f9SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
77643674050SBarry Smith     MatCheckPreallocated(A,1);
7779566063dSJacob Faibussowitsch     PetscCall(MatSetOption(a->A,op,flg));
77812c028f9SKris Buschelman     break;
77912c028f9SKris Buschelman   case MAT_ROW_ORIENTED:
78043674050SBarry Smith     MatCheckPreallocated(A,1);
7814e0d8c25SBarry Smith     a->roworiented = flg;
7829566063dSJacob Faibussowitsch     PetscCall(MatSetOption(a->A,op,flg));
78312c028f9SKris Buschelman     break;
7848c78258cSHong Zhang   case MAT_FORCE_DIAGONAL_ENTRIES:
78513fa8e87SLisandro Dalcin   case MAT_KEEP_NONZERO_PATTERN:
78612c028f9SKris Buschelman   case MAT_USE_HASH_TABLE:
787071fcb05SBarry Smith   case MAT_SORTED_FULL:
7889566063dSJacob Faibussowitsch     PetscCall(PetscInfo(A,"Option %s ignored\n",MatOptions[op]));
78912c028f9SKris Buschelman     break;
79012c028f9SKris Buschelman   case MAT_IGNORE_OFF_PROC_ENTRIES:
7914e0d8c25SBarry Smith     a->donotstash = flg;
79212c028f9SKris Buschelman     break;
79377e54ba9SKris Buschelman   case MAT_SYMMETRIC:
79477e54ba9SKris Buschelman   case MAT_STRUCTURALLY_SYMMETRIC:
7959a4540c5SBarry Smith   case MAT_HERMITIAN:
7969a4540c5SBarry Smith   case MAT_SYMMETRY_ETERNAL:
797600fe468SBarry Smith   case MAT_IGNORE_LOWER_TRIANGULAR:
7985d7aebe8SStefano Zampini   case MAT_IGNORE_ZERO_ENTRIES:
7999566063dSJacob Faibussowitsch     PetscCall(PetscInfo(A,"Option %s ignored\n",MatOptions[op]));
80077e54ba9SKris Buschelman     break;
80112c028f9SKris Buschelman   default:
80298921bdaSJacob Faibussowitsch     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"unknown option %s",MatOptions[op]);
8033a40ed3dSBarry Smith   }
8043a40ed3dSBarry Smith   PetscFunctionReturn(0);
8058965ea79SLois Curfman McInnes }
8068965ea79SLois Curfman McInnes 
807dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_MPIDense(Mat A,Vec ll,Vec rr)
8085b2fa520SLois Curfman McInnes {
8095b2fa520SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
810637a0070SStefano Zampini   const PetscScalar *l;
811637a0070SStefano Zampini   PetscScalar       x,*v,*vv,*r;
812637a0070SStefano Zampini   PetscInt          i,j,s2a,s3a,s2,s3,m=mdn->A->rmap->n,n=mdn->A->cmap->n,lda;
8135b2fa520SLois Curfman McInnes 
8145b2fa520SLois Curfman McInnes   PetscFunctionBegin;
8159566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(mdn->A,&vv));
8169566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(mdn->A,&lda));
8179566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(A,&s2,&s3));
8185b2fa520SLois Curfman McInnes   if (ll) {
8199566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(ll,&s2a));
82008401ef6SPierre Jolivet     PetscCheck(s2a == s2,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2);
8219566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(ll,&l));
8225b2fa520SLois Curfman McInnes     for (i=0; i<m; i++) {
8235b2fa520SLois Curfman McInnes       x = l[i];
824637a0070SStefano Zampini       v = vv + i;
825637a0070SStefano Zampini       for (j=0; j<n; j++) { (*v) *= x; v+= lda;}
8265b2fa520SLois Curfman McInnes     }
8279566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(ll,&l));
8289566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(1.0*n*m));
8295b2fa520SLois Curfman McInnes   }
8305b2fa520SLois Curfman McInnes   if (rr) {
831637a0070SStefano Zampini     const PetscScalar *ar;
832637a0070SStefano Zampini 
8339566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(rr,&s3a));
83408401ef6SPierre Jolivet     PetscCheck(s3a == s3,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3);
8359566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(rr,&ar));
8366f08ad05SPierre Jolivet     if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
8379566063dSJacob Faibussowitsch     PetscCall(VecGetArray(mdn->lvec,&r));
8389566063dSJacob Faibussowitsch     PetscCall(PetscSFBcastBegin(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE));
8399566063dSJacob Faibussowitsch     PetscCall(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE));
8409566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(rr,&ar));
8415b2fa520SLois Curfman McInnes     for (i=0; i<n; i++) {
8425b2fa520SLois Curfman McInnes       x = r[i];
843637a0070SStefano Zampini       v = vv + i*lda;
8442205254eSKarl Rupp       for (j=0; j<m; j++) (*v++) *= x;
8455b2fa520SLois Curfman McInnes     }
8469566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(mdn->lvec,&r));
8479566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(1.0*n*m));
8485b2fa520SLois Curfman McInnes   }
8499566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(mdn->A,&vv));
8505b2fa520SLois Curfman McInnes   PetscFunctionReturn(0);
8515b2fa520SLois Curfman McInnes }
8525b2fa520SLois Curfman McInnes 
853dfbe8321SBarry Smith PetscErrorCode MatNorm_MPIDense(Mat A,NormType type,PetscReal *nrm)
854096963f5SLois Curfman McInnes {
8553501a2bdSLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
85613f74950SBarry Smith   PetscInt          i,j;
857616b8fbbSStefano Zampini   PetscMPIInt       size;
858329f5518SBarry Smith   PetscReal         sum = 0.0;
859637a0070SStefano Zampini   const PetscScalar *av,*v;
8603501a2bdSLois Curfman McInnes 
8613a40ed3dSBarry Smith   PetscFunctionBegin;
8629566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(mdn->A,&av));
863637a0070SStefano Zampini   v    = av;
8649566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A),&size));
865616b8fbbSStefano Zampini   if (size == 1) {
8669566063dSJacob Faibussowitsch     PetscCall(MatNorm(mdn->A,type,nrm));
8673501a2bdSLois Curfman McInnes   } else {
8683501a2bdSLois Curfman McInnes     if (type == NORM_FROBENIUS) {
869d0f46423SBarry Smith       for (i=0; i<mdn->A->cmap->n*mdn->A->rmap->n; i++) {
870329f5518SBarry Smith         sum += PetscRealPart(PetscConj(*v)*(*v)); v++;
8713501a2bdSLois Curfman McInnes       }
8721c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(&sum,nrm,1,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A)));
8738f1a2a5eSBarry Smith       *nrm = PetscSqrtReal(*nrm);
8749566063dSJacob Faibussowitsch       PetscCall(PetscLogFlops(2.0*mdn->A->cmap->n*mdn->A->rmap->n));
8753a40ed3dSBarry Smith     } else if (type == NORM_1) {
876329f5518SBarry Smith       PetscReal *tmp,*tmp2;
8779566063dSJacob Faibussowitsch       PetscCall(PetscCalloc2(A->cmap->N,&tmp,A->cmap->N,&tmp2));
878064f8208SBarry Smith       *nrm = 0.0;
879637a0070SStefano Zampini       v    = av;
880d0f46423SBarry Smith       for (j=0; j<mdn->A->cmap->n; j++) {
881d0f46423SBarry Smith         for (i=0; i<mdn->A->rmap->n; i++) {
88267e560aaSBarry Smith           tmp[j] += PetscAbsScalar(*v);  v++;
8833501a2bdSLois Curfman McInnes         }
8843501a2bdSLois Curfman McInnes       }
8851c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(tmp,tmp2,A->cmap->N,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A)));
886d0f46423SBarry Smith       for (j=0; j<A->cmap->N; j++) {
887064f8208SBarry Smith         if (tmp2[j] > *nrm) *nrm = tmp2[j];
8883501a2bdSLois Curfman McInnes       }
8899566063dSJacob Faibussowitsch       PetscCall(PetscFree2(tmp,tmp2));
8909566063dSJacob Faibussowitsch       PetscCall(PetscLogFlops(A->cmap->n*A->rmap->n));
8913a40ed3dSBarry Smith     } else if (type == NORM_INFINITY) { /* max row norm */
892329f5518SBarry Smith       PetscReal ntemp;
8939566063dSJacob Faibussowitsch       PetscCall(MatNorm(mdn->A,type,&ntemp));
8941c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(&ntemp,nrm,1,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)A)));
895ce94432eSBarry Smith     } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for two norm");
8963501a2bdSLois Curfman McInnes   }
8979566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(mdn->A,&av));
8983a40ed3dSBarry Smith   PetscFunctionReturn(0);
8993501a2bdSLois Curfman McInnes }
9003501a2bdSLois Curfman McInnes 
901fc4dec0aSBarry Smith PetscErrorCode MatTranspose_MPIDense(Mat A,MatReuse reuse,Mat *matout)
9023501a2bdSLois Curfman McInnes {
9033501a2bdSLois Curfman McInnes   Mat_MPIDense   *a    = (Mat_MPIDense*)A->data;
9043501a2bdSLois Curfman McInnes   Mat            B;
905d0f46423SBarry Smith   PetscInt       M = A->rmap->N,N = A->cmap->N,m,n,*rwork,rstart = A->rmap->rstart;
906637a0070SStefano Zampini   PetscInt       j,i,lda;
90787828ca2SBarry Smith   PetscScalar    *v;
9083501a2bdSLois Curfman McInnes 
9093a40ed3dSBarry Smith   PetscFunctionBegin;
910cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) {
9119566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&B));
9129566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B,A->cmap->n,A->rmap->n,N,M));
9139566063dSJacob Faibussowitsch     PetscCall(MatSetType(B,((PetscObject)A)->type_name));
9149566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(B,NULL));
915637a0070SStefano Zampini   } else B = *matout;
9163501a2bdSLois Curfman McInnes 
917637a0070SStefano Zampini   m    = a->A->rmap->n; n = a->A->cmap->n;
9189566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,(const PetscScalar**)&v));
9199566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
9209566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(m,&rwork));
9213501a2bdSLois Curfman McInnes   for (i=0; i<m; i++) rwork[i] = rstart + i;
9221acff37aSSatish Balay   for (j=0; j<n; j++) {
9239566063dSJacob Faibussowitsch     PetscCall(MatSetValues(B,1,&j,m,rwork,v,INSERT_VALUES));
924637a0070SStefano Zampini     v   += lda;
9253501a2bdSLois Curfman McInnes   }
9269566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,(const PetscScalar**)&v));
9279566063dSJacob Faibussowitsch   PetscCall(PetscFree(rwork));
9289566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY));
9299566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY));
930cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) {
9313501a2bdSLois Curfman McInnes     *matout = B;
9323501a2bdSLois Curfman McInnes   } else {
9339566063dSJacob Faibussowitsch     PetscCall(MatHeaderMerge(A,&B));
9343501a2bdSLois Curfman McInnes   }
9353a40ed3dSBarry Smith   PetscFunctionReturn(0);
936096963f5SLois Curfman McInnes }
937096963f5SLois Curfman McInnes 
9386849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat,MatDuplicateOption,Mat*);
93952c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat,PetscScalar);
9408965ea79SLois Curfman McInnes 
9414994cf47SJed Brown PetscErrorCode MatSetUp_MPIDense(Mat A)
942273d9f13SBarry Smith {
943273d9f13SBarry Smith   PetscFunctionBegin;
9449566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->rmap));
9459566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->cmap));
94618992e5dSStefano Zampini   if (!A->preallocated) {
9479566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(A,NULL));
94818992e5dSStefano Zampini   }
949273d9f13SBarry Smith   PetscFunctionReturn(0);
950273d9f13SBarry Smith }
951273d9f13SBarry Smith 
952488007eeSBarry Smith PetscErrorCode MatAXPY_MPIDense(Mat Y,PetscScalar alpha,Mat X,MatStructure str)
953488007eeSBarry Smith {
954488007eeSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)Y->data, *B = (Mat_MPIDense*)X->data;
955488007eeSBarry Smith 
956488007eeSBarry Smith   PetscFunctionBegin;
9579566063dSJacob Faibussowitsch   PetscCall(MatAXPY(A->A,alpha,B->A,str));
958488007eeSBarry Smith   PetscFunctionReturn(0);
959488007eeSBarry Smith }
960488007eeSBarry Smith 
9617087cfbeSBarry Smith PetscErrorCode MatConjugate_MPIDense(Mat mat)
962ba337c44SJed Brown {
963ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
964ba337c44SJed Brown 
965ba337c44SJed Brown   PetscFunctionBegin;
9669566063dSJacob Faibussowitsch   PetscCall(MatConjugate(a->A));
967ba337c44SJed Brown   PetscFunctionReturn(0);
968ba337c44SJed Brown }
969ba337c44SJed Brown 
970ba337c44SJed Brown PetscErrorCode MatRealPart_MPIDense(Mat A)
971ba337c44SJed Brown {
972ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
973ba337c44SJed Brown 
974ba337c44SJed Brown   PetscFunctionBegin;
9759566063dSJacob Faibussowitsch   PetscCall(MatRealPart(a->A));
976ba337c44SJed Brown   PetscFunctionReturn(0);
977ba337c44SJed Brown }
978ba337c44SJed Brown 
979ba337c44SJed Brown PetscErrorCode MatImaginaryPart_MPIDense(Mat A)
980ba337c44SJed Brown {
981ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
982ba337c44SJed Brown 
983ba337c44SJed Brown   PetscFunctionBegin;
9849566063dSJacob Faibussowitsch   PetscCall(MatImaginaryPart(a->A));
985ba337c44SJed Brown   PetscFunctionReturn(0);
986ba337c44SJed Brown }
987ba337c44SJed Brown 
98849a6ff4bSBarry Smith static PetscErrorCode MatGetColumnVector_MPIDense(Mat A,Vec v,PetscInt col)
98949a6ff4bSBarry Smith {
990637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
99149a6ff4bSBarry Smith 
99249a6ff4bSBarry Smith   PetscFunctionBegin;
99328b400f6SJacob Faibussowitsch   PetscCheck(a->A,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing local matrix");
99428b400f6SJacob Faibussowitsch   PetscCheck(a->A->ops->getcolumnvector,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing get column operation");
9959566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->getcolumnvector)(a->A,v,col));
99649a6ff4bSBarry Smith   PetscFunctionReturn(0);
99749a6ff4bSBarry Smith }
99849a6ff4bSBarry Smith 
999857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat,PetscInt,PetscReal*);
100052c5f739Sprj- 
1001857cbf51SRichard Tran Mills PetscErrorCode MatGetColumnReductions_MPIDense(Mat A,PetscInt type,PetscReal *reductions)
10020716a85fSBarry Smith {
1003a873a8cdSSam Reynolds   PetscInt       i,m,n;
10040716a85fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
10050716a85fSBarry Smith   PetscReal      *work;
10060716a85fSBarry Smith 
10070716a85fSBarry Smith   PetscFunctionBegin;
10089566063dSJacob Faibussowitsch   PetscCall(MatGetSize(A,&m,&n));
10099566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(n,&work));
1010857cbf51SRichard Tran Mills   if (type == REDUCTION_MEAN_REALPART) {
10119566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A,(PetscInt)REDUCTION_SUM_REALPART,work));
1012857cbf51SRichard Tran Mills   } else if (type == REDUCTION_MEAN_IMAGINARYPART) {
10139566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A,(PetscInt)REDUCTION_SUM_IMAGINARYPART,work));
1014a873a8cdSSam Reynolds   } else {
10159566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A,type,work));
1016a873a8cdSSam Reynolds   }
1017857cbf51SRichard Tran Mills   if (type == NORM_2) {
10180716a85fSBarry Smith     for (i=0; i<n; i++) work[i] *= work[i];
10190716a85fSBarry Smith   }
1020857cbf51SRichard Tran Mills   if (type == NORM_INFINITY) {
10211c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(work,reductions,n,MPIU_REAL,MPIU_MAX,A->hdr.comm));
10220716a85fSBarry Smith   } else {
10231c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(work,reductions,n,MPIU_REAL,MPIU_SUM,A->hdr.comm));
10240716a85fSBarry Smith   }
10259566063dSJacob Faibussowitsch   PetscCall(PetscFree(work));
1026857cbf51SRichard Tran Mills   if (type == NORM_2) {
1027a873a8cdSSam Reynolds     for (i=0; i<n; i++) reductions[i] = PetscSqrtReal(reductions[i]);
1028857cbf51SRichard Tran Mills   } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) {
1029a873a8cdSSam Reynolds     for (i=0; i<n; i++) reductions[i] /= m;
10300716a85fSBarry Smith   }
10310716a85fSBarry Smith   PetscFunctionReturn(0);
10320716a85fSBarry Smith }
10330716a85fSBarry Smith 
1034637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1035*126e4e93SJose E. Roman PetscErrorCode MatShift_MPIDenseCUDA(Mat A,PetscScalar alpha)
1036*126e4e93SJose E. Roman {
1037*126e4e93SJose E. Roman   PetscScalar *da;
1038*126e4e93SJose E. Roman   PetscInt    lda;
1039*126e4e93SJose E. Roman 
1040*126e4e93SJose E. Roman   PetscFunctionBegin;
1041*126e4e93SJose E. Roman   PetscCall(MatDenseCUDAGetArray(A,&da));
1042*126e4e93SJose E. Roman   PetscCall(MatDenseGetLDA(A,&lda));
1043*126e4e93SJose E. Roman   PetscCall(PetscInfo(A,"Performing Shift on backend\n"));
1044*126e4e93SJose E. Roman   PetscCall(MatShift_DenseCUDA_Private(da,alpha,lda,A->rmap->rstart,A->rmap->rend,A->cmap->N));
1045*126e4e93SJose E. Roman   PetscCall(MatDenseCUDARestoreArray(A,&da));
1046*126e4e93SJose E. Roman   PetscFunctionReturn(0);
1047*126e4e93SJose E. Roman }
1048*126e4e93SJose E. Roman 
10496947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10506947451fSStefano Zampini {
10516947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10526947451fSStefano Zampini   PetscInt       lda;
10536947451fSStefano Zampini 
10546947451fSStefano Zampini   PetscFunctionBegin;
105528b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
105628b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10576947451fSStefano Zampini   if (!a->cvec) {
10589566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
10599566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
10606947451fSStefano Zampini   }
10616947451fSStefano Zampini   a->vecinuse = col + 1;
10629566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
10639566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArray(a->A,(PetscScalar**)&a->ptrinuse));
10649566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
10656947451fSStefano Zampini   *v   = a->cvec;
10666947451fSStefano Zampini   PetscFunctionReturn(0);
10676947451fSStefano Zampini }
10686947451fSStefano Zampini 
10696947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10706947451fSStefano Zampini {
10716947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10726947451fSStefano Zampini 
10736947451fSStefano Zampini   PetscFunctionBegin;
107428b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
107528b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
10766947451fSStefano Zampini   a->vecinuse = 0;
10779566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArray(a->A,(PetscScalar**)&a->ptrinuse));
10789566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
10796947451fSStefano Zampini   *v   = NULL;
10806947451fSStefano Zampini   PetscFunctionReturn(0);
10816947451fSStefano Zampini }
10826947451fSStefano Zampini 
10836947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10846947451fSStefano Zampini {
10856947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10866947451fSStefano Zampini   PetscInt       lda;
10876947451fSStefano Zampini 
10886947451fSStefano Zampini   PetscFunctionBegin;
108928b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
109028b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10916947451fSStefano Zampini   if (!a->cvec) {
10929566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
10939566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
10946947451fSStefano Zampini   }
10956947451fSStefano Zampini   a->vecinuse = col + 1;
10969566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
10979566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayRead(a->A,&a->ptrinuse));
10989566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
10999566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(a->cvec));
11006947451fSStefano Zampini   *v   = a->cvec;
11016947451fSStefano Zampini   PetscFunctionReturn(0);
11026947451fSStefano Zampini }
11036947451fSStefano Zampini 
11046947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11056947451fSStefano Zampini {
11066947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11076947451fSStefano Zampini 
11086947451fSStefano Zampini   PetscFunctionBegin;
110928b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
111028b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
11116947451fSStefano Zampini   a->vecinuse = 0;
11129566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayRead(a->A,&a->ptrinuse));
11139566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(a->cvec));
11149566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
11156947451fSStefano Zampini   *v   = NULL;
11166947451fSStefano Zampini   PetscFunctionReturn(0);
11176947451fSStefano Zampini }
11186947451fSStefano Zampini 
11196947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11206947451fSStefano Zampini {
11216947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11226947451fSStefano Zampini   PetscInt       lda;
11236947451fSStefano Zampini 
11246947451fSStefano Zampini   PetscFunctionBegin;
112528b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
112628b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11276947451fSStefano Zampini   if (!a->cvec) {
11289566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
11299566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
11306947451fSStefano Zampini   }
11316947451fSStefano Zampini   a->vecinuse = col + 1;
11329566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
11339566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
11349566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
11356947451fSStefano Zampini   *v   = a->cvec;
11366947451fSStefano Zampini   PetscFunctionReturn(0);
11376947451fSStefano Zampini }
11386947451fSStefano Zampini 
11396947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11406947451fSStefano Zampini {
11416947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11426947451fSStefano Zampini 
11436947451fSStefano Zampini   PetscFunctionBegin;
114428b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
114528b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
11466947451fSStefano Zampini   a->vecinuse = 0;
11479566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
11489566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
11496947451fSStefano Zampini   *v   = NULL;
11506947451fSStefano Zampini   PetscFunctionReturn(0);
11516947451fSStefano Zampini }
11526947451fSStefano Zampini 
1153637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAPlaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1154637a0070SStefano Zampini {
1155637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1156637a0070SStefano Zampini 
1157637a0070SStefano Zampini   PetscFunctionBegin;
115828b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
115928b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11609566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAPlaceArray(l->A,a));
1161637a0070SStefano Zampini   PetscFunctionReturn(0);
1162637a0070SStefano Zampini }
1163637a0070SStefano Zampini 
1164637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAResetArray_MPIDenseCUDA(Mat A)
1165637a0070SStefano Zampini {
1166637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1167637a0070SStefano Zampini 
1168637a0070SStefano Zampini   PetscFunctionBegin;
116928b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
117028b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11719566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAResetArray(l->A));
1172637a0070SStefano Zampini   PetscFunctionReturn(0);
1173637a0070SStefano Zampini }
1174637a0070SStefano Zampini 
1175d5ea218eSStefano Zampini static PetscErrorCode MatDenseCUDAReplaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1176d5ea218eSStefano Zampini {
1177d5ea218eSStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1178d5ea218eSStefano Zampini 
1179d5ea218eSStefano Zampini   PetscFunctionBegin;
118028b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
118128b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11829566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAReplaceArray(l->A,a));
1183d5ea218eSStefano Zampini   PetscFunctionReturn(0);
1184d5ea218eSStefano Zampini }
1185d5ea218eSStefano Zampini 
1186637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1187637a0070SStefano Zampini {
1188637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1189637a0070SStefano Zampini 
1190637a0070SStefano Zampini   PetscFunctionBegin;
11919566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayWrite(l->A,a));
1192637a0070SStefano Zampini   PetscFunctionReturn(0);
1193637a0070SStefano Zampini }
1194637a0070SStefano Zampini 
1195637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1196637a0070SStefano Zampini {
1197637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1198637a0070SStefano Zampini 
1199637a0070SStefano Zampini   PetscFunctionBegin;
12009566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayWrite(l->A,a));
1201637a0070SStefano Zampini   PetscFunctionReturn(0);
1202637a0070SStefano Zampini }
1203637a0070SStefano Zampini 
1204637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1205637a0070SStefano Zampini {
1206637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1207637a0070SStefano Zampini 
1208637a0070SStefano Zampini   PetscFunctionBegin;
12099566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayRead(l->A,a));
1210637a0070SStefano Zampini   PetscFunctionReturn(0);
1211637a0070SStefano Zampini }
1212637a0070SStefano Zampini 
1213637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1214637a0070SStefano Zampini {
1215637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1216637a0070SStefano Zampini 
1217637a0070SStefano Zampini   PetscFunctionBegin;
12189566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayRead(l->A,a));
1219637a0070SStefano Zampini   PetscFunctionReturn(0);
1220637a0070SStefano Zampini }
1221637a0070SStefano Zampini 
1222637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1223637a0070SStefano Zampini {
1224637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1225637a0070SStefano Zampini 
1226637a0070SStefano Zampini   PetscFunctionBegin;
12279566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArray(l->A,a));
1228637a0070SStefano Zampini   PetscFunctionReturn(0);
1229637a0070SStefano Zampini }
1230637a0070SStefano Zampini 
1231637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1232637a0070SStefano Zampini {
1233637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1234637a0070SStefano Zampini 
1235637a0070SStefano Zampini   PetscFunctionBegin;
12369566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArray(l->A,a));
1237637a0070SStefano Zampini   PetscFunctionReturn(0);
1238637a0070SStefano Zampini }
1239637a0070SStefano Zampini 
12406947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12416947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12426947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat,PetscInt,Vec*);
12436947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12446947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12456947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat,PetscInt,Vec*);
12465ea7661aSPierre Jolivet static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat,Mat*);
12476947451fSStefano Zampini 
1248637a0070SStefano Zampini static PetscErrorCode MatBindToCPU_MPIDenseCUDA(Mat mat,PetscBool bind)
1249637a0070SStefano Zampini {
1250637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)mat->data;
1251637a0070SStefano Zampini 
1252637a0070SStefano Zampini   PetscFunctionBegin;
125328b400f6SJacob Faibussowitsch   PetscCheck(!d->vecinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
125428b400f6SJacob Faibussowitsch   PetscCheck(!d->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1255637a0070SStefano Zampini   if (d->A) {
12569566063dSJacob Faibussowitsch     PetscCall(MatBindToCPU(d->A,bind));
1257637a0070SStefano Zampini   }
1258637a0070SStefano Zampini   mat->boundtocpu = bind;
12596947451fSStefano Zampini   if (!bind) {
12606947451fSStefano Zampini     PetscBool iscuda;
12616947451fSStefano Zampini 
12629566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)d->cvec,VECMPICUDA,&iscuda));
12636947451fSStefano Zampini     if (!iscuda) {
12649566063dSJacob Faibussowitsch       PetscCall(VecDestroy(&d->cvec));
1265616b8fbbSStefano Zampini     }
12669566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)d->cmat,MATMPIDENSECUDA,&iscuda));
1267616b8fbbSStefano Zampini     if (!iscuda) {
12689566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&d->cmat));
12696947451fSStefano Zampini     }
12709566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDenseCUDA));
12719566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDenseCUDA));
12729566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDenseCUDA));
12739566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDenseCUDA));
12749566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDenseCUDA));
12759566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDenseCUDA));
1276*126e4e93SJose E. Roman     mat->ops->shift                   = MatShift_MPIDenseCUDA;
12776947451fSStefano Zampini   } else {
12789566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense));
12799566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense));
12809566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense));
12819566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense));
12829566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense));
12839566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense));
1284*126e4e93SJose E. Roman     mat->ops->shift                   = MatShift_MPIDense;
1285616b8fbbSStefano Zampini   }
1286616b8fbbSStefano Zampini   if (d->cmat) {
12879566063dSJacob Faibussowitsch     PetscCall(MatBindToCPU(d->cmat,bind));
12886947451fSStefano Zampini   }
1289637a0070SStefano Zampini   PetscFunctionReturn(0);
1290637a0070SStefano Zampini }
1291637a0070SStefano Zampini 
1292637a0070SStefano Zampini PetscErrorCode MatMPIDenseCUDASetPreallocation(Mat A, PetscScalar *d_data)
1293637a0070SStefano Zampini {
1294637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)A->data;
1295637a0070SStefano Zampini   PetscBool      iscuda;
1296637a0070SStefano Zampini 
1297637a0070SStefano Zampini   PetscFunctionBegin;
1298d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
12999566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda));
1300637a0070SStefano Zampini   if (!iscuda) PetscFunctionReturn(0);
13019566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->rmap));
13029566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->cmap));
1303637a0070SStefano Zampini   if (!d->A) {
13049566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF,&d->A));
13059566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)d->A));
13069566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(d->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N));
1307637a0070SStefano Zampini   }
13089566063dSJacob Faibussowitsch   PetscCall(MatSetType(d->A,MATSEQDENSECUDA));
13099566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseCUDASetPreallocation(d->A,d_data));
1310637a0070SStefano Zampini   A->preallocated = PETSC_TRUE;
13116f08ad05SPierre Jolivet   A->assembled = PETSC_TRUE;
1312637a0070SStefano Zampini   PetscFunctionReturn(0);
1313637a0070SStefano Zampini }
1314637a0070SStefano Zampini #endif
1315637a0070SStefano Zampini 
131673a71a0fSBarry Smith static PetscErrorCode MatSetRandom_MPIDense(Mat x,PetscRandom rctx)
131773a71a0fSBarry Smith {
131873a71a0fSBarry Smith   Mat_MPIDense   *d = (Mat_MPIDense*)x->data;
131973a71a0fSBarry Smith 
132073a71a0fSBarry Smith   PetscFunctionBegin;
13219566063dSJacob Faibussowitsch   PetscCall(MatSetRandom(d->A,rctx));
132273a71a0fSBarry Smith   PetscFunctionReturn(0);
132373a71a0fSBarry Smith }
132473a71a0fSBarry Smith 
13253b49f96aSBarry Smith static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A,PetscBool  *missing,PetscInt *d)
13263b49f96aSBarry Smith {
13273b49f96aSBarry Smith   PetscFunctionBegin;
13283b49f96aSBarry Smith   *missing = PETSC_FALSE;
13293b49f96aSBarry Smith   PetscFunctionReturn(0);
13303b49f96aSBarry Smith }
13313b49f96aSBarry Smith 
13324222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1333cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13346718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1335a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13366718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat,Mat,PetscBool*);
13376718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat,PetscViewer);
1338cc48ffa7SToby Isaac 
13398965ea79SLois Curfman McInnes /* -------------------------------------------------------------------*/
134009dc0095SBarry Smith static struct _MatOps MatOps_Values = { MatSetValues_MPIDense,
134109dc0095SBarry Smith                                         MatGetRow_MPIDense,
134209dc0095SBarry Smith                                         MatRestoreRow_MPIDense,
134309dc0095SBarry Smith                                         MatMult_MPIDense,
134497304618SKris Buschelman                                 /*  4*/ MatMultAdd_MPIDense,
13457c922b88SBarry Smith                                         MatMultTranspose_MPIDense,
13467c922b88SBarry Smith                                         MatMultTransposeAdd_MPIDense,
1347f4259b30SLisandro Dalcin                                         NULL,
1348f4259b30SLisandro Dalcin                                         NULL,
1349f4259b30SLisandro Dalcin                                         NULL,
1350f4259b30SLisandro Dalcin                                 /* 10*/ NULL,
1351f4259b30SLisandro Dalcin                                         NULL,
1352f4259b30SLisandro Dalcin                                         NULL,
1353f4259b30SLisandro Dalcin                                         NULL,
135409dc0095SBarry Smith                                         MatTranspose_MPIDense,
135597304618SKris Buschelman                                 /* 15*/ MatGetInfo_MPIDense,
13566e4ee0c6SHong Zhang                                         MatEqual_MPIDense,
135709dc0095SBarry Smith                                         MatGetDiagonal_MPIDense,
13585b2fa520SLois Curfman McInnes                                         MatDiagonalScale_MPIDense,
135909dc0095SBarry Smith                                         MatNorm_MPIDense,
136097304618SKris Buschelman                                 /* 20*/ MatAssemblyBegin_MPIDense,
136109dc0095SBarry Smith                                         MatAssemblyEnd_MPIDense,
136209dc0095SBarry Smith                                         MatSetOption_MPIDense,
136309dc0095SBarry Smith                                         MatZeroEntries_MPIDense,
1364d519adbfSMatthew Knepley                                 /* 24*/ MatZeroRows_MPIDense,
1365f4259b30SLisandro Dalcin                                         NULL,
1366f4259b30SLisandro Dalcin                                         NULL,
1367f4259b30SLisandro Dalcin                                         NULL,
1368f4259b30SLisandro Dalcin                                         NULL,
13694994cf47SJed Brown                                 /* 29*/ MatSetUp_MPIDense,
1370f4259b30SLisandro Dalcin                                         NULL,
1371f4259b30SLisandro Dalcin                                         NULL,
1372c56a70eeSBarry Smith                                         MatGetDiagonalBlock_MPIDense,
1373f4259b30SLisandro Dalcin                                         NULL,
1374d519adbfSMatthew Knepley                                 /* 34*/ MatDuplicate_MPIDense,
1375f4259b30SLisandro Dalcin                                         NULL,
1376f4259b30SLisandro Dalcin                                         NULL,
1377f4259b30SLisandro Dalcin                                         NULL,
1378f4259b30SLisandro Dalcin                                         NULL,
1379d519adbfSMatthew Knepley                                 /* 39*/ MatAXPY_MPIDense,
13807dae84e0SHong Zhang                                         MatCreateSubMatrices_MPIDense,
1381f4259b30SLisandro Dalcin                                         NULL,
138209dc0095SBarry Smith                                         MatGetValues_MPIDense,
1383a76f77c3SStefano Zampini                                         MatCopy_MPIDense,
1384f4259b30SLisandro Dalcin                                 /* 44*/ NULL,
138509dc0095SBarry Smith                                         MatScale_MPIDense,
13862f605a99SJose E. Roman                                         MatShift_MPIDense,
1387f4259b30SLisandro Dalcin                                         NULL,
1388f4259b30SLisandro Dalcin                                         NULL,
138973a71a0fSBarry Smith                                 /* 49*/ MatSetRandom_MPIDense,
1390f4259b30SLisandro Dalcin                                         NULL,
1391f4259b30SLisandro Dalcin                                         NULL,
1392f4259b30SLisandro Dalcin                                         NULL,
1393f4259b30SLisandro Dalcin                                         NULL,
1394f4259b30SLisandro Dalcin                                 /* 54*/ NULL,
1395f4259b30SLisandro Dalcin                                         NULL,
1396f4259b30SLisandro Dalcin                                         NULL,
1397f4259b30SLisandro Dalcin                                         NULL,
1398f4259b30SLisandro Dalcin                                         NULL,
13997dae84e0SHong Zhang                                 /* 59*/ MatCreateSubMatrix_MPIDense,
1400b9b97703SBarry Smith                                         MatDestroy_MPIDense,
1401b9b97703SBarry Smith                                         MatView_MPIDense,
1402f4259b30SLisandro Dalcin                                         NULL,
1403f4259b30SLisandro Dalcin                                         NULL,
1404f4259b30SLisandro Dalcin                                 /* 64*/ NULL,
1405f4259b30SLisandro Dalcin                                         NULL,
1406f4259b30SLisandro Dalcin                                         NULL,
1407f4259b30SLisandro Dalcin                                         NULL,
1408f4259b30SLisandro Dalcin                                         NULL,
1409f4259b30SLisandro Dalcin                                 /* 69*/ NULL,
1410f4259b30SLisandro Dalcin                                         NULL,
1411f4259b30SLisandro Dalcin                                         NULL,
1412f4259b30SLisandro Dalcin                                         NULL,
1413f4259b30SLisandro Dalcin                                         NULL,
1414f4259b30SLisandro Dalcin                                 /* 74*/ NULL,
1415f4259b30SLisandro Dalcin                                         NULL,
1416f4259b30SLisandro Dalcin                                         NULL,
1417f4259b30SLisandro Dalcin                                         NULL,
1418f4259b30SLisandro Dalcin                                         NULL,
1419f4259b30SLisandro Dalcin                                 /* 79*/ NULL,
1420f4259b30SLisandro Dalcin                                         NULL,
1421f4259b30SLisandro Dalcin                                         NULL,
1422f4259b30SLisandro Dalcin                                         NULL,
14235bba2384SShri Abhyankar                                 /* 83*/ MatLoad_MPIDense,
1424f4259b30SLisandro Dalcin                                         NULL,
1425f4259b30SLisandro Dalcin                                         NULL,
1426f4259b30SLisandro Dalcin                                         NULL,
1427f4259b30SLisandro Dalcin                                         NULL,
1428f4259b30SLisandro Dalcin                                         NULL,
1429f4259b30SLisandro Dalcin                                 /* 89*/ NULL,
1430f4259b30SLisandro Dalcin                                         NULL,
1431f4259b30SLisandro Dalcin                                         NULL,
1432f4259b30SLisandro Dalcin                                         NULL,
1433f4259b30SLisandro Dalcin                                         NULL,
1434f4259b30SLisandro Dalcin                                 /* 94*/ NULL,
1435f4259b30SLisandro Dalcin                                         NULL,
14366718818eSStefano Zampini                                         MatMatTransposeMultSymbolic_MPIDense_MPIDense,
1437cc48ffa7SToby Isaac                                         MatMatTransposeMultNumeric_MPIDense_MPIDense,
1438f4259b30SLisandro Dalcin                                         NULL,
14394222ddf1SHong Zhang                                 /* 99*/ MatProductSetFromOptions_MPIDense,
1440f4259b30SLisandro Dalcin                                         NULL,
1441f4259b30SLisandro Dalcin                                         NULL,
1442ba337c44SJed Brown                                         MatConjugate_MPIDense,
1443f4259b30SLisandro Dalcin                                         NULL,
1444f4259b30SLisandro Dalcin                                 /*104*/ NULL,
1445ba337c44SJed Brown                                         MatRealPart_MPIDense,
1446ba337c44SJed Brown                                         MatImaginaryPart_MPIDense,
1447f4259b30SLisandro Dalcin                                         NULL,
1448f4259b30SLisandro Dalcin                                         NULL,
1449f4259b30SLisandro Dalcin                                 /*109*/ NULL,
1450f4259b30SLisandro Dalcin                                         NULL,
1451f4259b30SLisandro Dalcin                                         NULL,
145249a6ff4bSBarry Smith                                         MatGetColumnVector_MPIDense,
14533b49f96aSBarry Smith                                         MatMissingDiagonal_MPIDense,
1454f4259b30SLisandro Dalcin                                 /*114*/ NULL,
1455f4259b30SLisandro Dalcin                                         NULL,
1456f4259b30SLisandro Dalcin                                         NULL,
1457f4259b30SLisandro Dalcin                                         NULL,
1458f4259b30SLisandro Dalcin                                         NULL,
1459f4259b30SLisandro Dalcin                                 /*119*/ NULL,
1460f4259b30SLisandro Dalcin                                         NULL,
1461f4259b30SLisandro Dalcin                                         NULL,
1462f4259b30SLisandro Dalcin                                         NULL,
1463f4259b30SLisandro Dalcin                                         NULL,
1464f4259b30SLisandro Dalcin                                 /*124*/ NULL,
1465a873a8cdSSam Reynolds                                         MatGetColumnReductions_MPIDense,
1466f4259b30SLisandro Dalcin                                         NULL,
1467f4259b30SLisandro Dalcin                                         NULL,
1468f4259b30SLisandro Dalcin                                         NULL,
1469f4259b30SLisandro Dalcin                                 /*129*/ NULL,
1470f4259b30SLisandro Dalcin                                         NULL,
14716718818eSStefano Zampini                                         MatTransposeMatMultSymbolic_MPIDense_MPIDense,
1472cb20be35SHong Zhang                                         MatTransposeMatMultNumeric_MPIDense_MPIDense,
1473f4259b30SLisandro Dalcin                                         NULL,
1474f4259b30SLisandro Dalcin                                 /*134*/ NULL,
1475f4259b30SLisandro Dalcin                                         NULL,
1476f4259b30SLisandro Dalcin                                         NULL,
1477f4259b30SLisandro Dalcin                                         NULL,
1478f4259b30SLisandro Dalcin                                         NULL,
1479f4259b30SLisandro Dalcin                                 /*139*/ NULL,
1480f4259b30SLisandro Dalcin                                         NULL,
1481f4259b30SLisandro Dalcin                                         NULL,
1482f4259b30SLisandro Dalcin                                         NULL,
1483f4259b30SLisandro Dalcin                                         NULL,
14844222ddf1SHong Zhang                                         MatCreateMPIMatConcatenateSeqMat_MPIDense,
1485f4259b30SLisandro Dalcin                                 /*145*/ NULL,
1486f4259b30SLisandro Dalcin                                         NULL,
1487f4259b30SLisandro Dalcin                                         NULL
1488ba337c44SJed Brown };
14898965ea79SLois Curfman McInnes 
14907087cfbeSBarry Smith PetscErrorCode  MatMPIDenseSetPreallocation_MPIDense(Mat mat,PetscScalar *data)
1491a23d5eceSKris Buschelman {
1492637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
1493637a0070SStefano Zampini   PetscBool      iscuda;
1494a23d5eceSKris Buschelman 
1495a23d5eceSKris Buschelman   PetscFunctionBegin;
149628b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
14979566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(mat->rmap));
14989566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(mat->cmap));
1499637a0070SStefano Zampini   if (!a->A) {
15009566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF,&a->A));
15019566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A));
15029566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(a->A,mat->rmap->n,mat->cmap->N,mat->rmap->n,mat->cmap->N));
1503637a0070SStefano Zampini   }
15049566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)mat,MATMPIDENSECUDA,&iscuda));
15059566063dSJacob Faibussowitsch   PetscCall(MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE));
15069566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseSetPreallocation(a->A,data));
1507637a0070SStefano Zampini   mat->preallocated = PETSC_TRUE;
15086f08ad05SPierre Jolivet   mat->assembled = PETSC_TRUE;
1509a23d5eceSKris Buschelman   PetscFunctionReturn(0);
1510a23d5eceSKris Buschelman }
1511a23d5eceSKris Buschelman 
15124e29119aSPierre Jolivet PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15134e29119aSPierre Jolivet {
15144e29119aSPierre Jolivet   Mat            B,C;
15154e29119aSPierre Jolivet 
15164e29119aSPierre Jolivet   PetscFunctionBegin;
15179566063dSJacob Faibussowitsch   PetscCall(MatMPIAIJGetLocalMat(A,MAT_INITIAL_MATRIX,&C));
15189566063dSJacob Faibussowitsch   PetscCall(MatConvert_SeqAIJ_SeqDense(C,MATSEQDENSE,MAT_INITIAL_MATRIX,&B));
15199566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&C));
15204e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
15214e29119aSPierre Jolivet     C = *newmat;
15224e29119aSPierre Jolivet   } else C = NULL;
15239566063dSJacob Faibussowitsch   PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A),B,A->cmap->n,!C?MAT_INITIAL_MATRIX:MAT_REUSE_MATRIX,&C));
15249566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&B));
15254e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
15269566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A,&C));
15274e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
15284e29119aSPierre Jolivet   PetscFunctionReturn(0);
15294e29119aSPierre Jolivet }
15304e29119aSPierre Jolivet 
15314e29119aSPierre Jolivet PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15324e29119aSPierre Jolivet {
15334e29119aSPierre Jolivet   Mat            B,C;
15344e29119aSPierre Jolivet 
15354e29119aSPierre Jolivet   PetscFunctionBegin;
15369566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLocalMatrix(A,&C));
15379566063dSJacob Faibussowitsch   PetscCall(MatConvert_SeqDense_SeqAIJ(C,MATSEQAIJ,MAT_INITIAL_MATRIX,&B));
15384e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
15394e29119aSPierre Jolivet     C = *newmat;
15404e29119aSPierre Jolivet   } else C = NULL;
15419566063dSJacob Faibussowitsch   PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A),B,A->cmap->n,!C?MAT_INITIAL_MATRIX:MAT_REUSE_MATRIX,&C));
15429566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&B));
15434e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
15449566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A,&C));
15454e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
15464e29119aSPierre Jolivet   PetscFunctionReturn(0);
15474e29119aSPierre Jolivet }
15484e29119aSPierre Jolivet 
154965b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
1550cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15518baccfbdSHong Zhang {
15528ea901baSHong Zhang   Mat            mat_elemental;
155332d7a744SHong Zhang   PetscScalar    *v;
155432d7a744SHong Zhang   PetscInt       m=A->rmap->n,N=A->cmap->N,rstart=A->rmap->rstart,i,*rows,*cols;
15558ea901baSHong Zhang 
15568baccfbdSHong Zhang   PetscFunctionBegin;
1557378336b6SHong Zhang   if (reuse == MAT_REUSE_MATRIX) {
1558378336b6SHong Zhang     mat_elemental = *newmat;
15599566063dSJacob Faibussowitsch     PetscCall(MatZeroEntries(*newmat));
1560378336b6SHong Zhang   } else {
15619566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental));
15629566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(mat_elemental,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N));
15639566063dSJacob Faibussowitsch     PetscCall(MatSetType(mat_elemental,MATELEMENTAL));
15649566063dSJacob Faibussowitsch     PetscCall(MatSetUp(mat_elemental));
15659566063dSJacob Faibussowitsch     PetscCall(MatSetOption(mat_elemental,MAT_ROW_ORIENTED,PETSC_FALSE));
1566378336b6SHong Zhang   }
1567378336b6SHong Zhang 
15689566063dSJacob Faibussowitsch   PetscCall(PetscMalloc2(m,&rows,N,&cols));
156932d7a744SHong Zhang   for (i=0; i<N; i++) cols[i] = i;
157032d7a744SHong Zhang   for (i=0; i<m; i++) rows[i] = rstart + i;
15718ea901baSHong Zhang 
1572637a0070SStefano Zampini   /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */
15739566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(A,&v));
15749566063dSJacob Faibussowitsch   PetscCall(MatSetValues(mat_elemental,m,rows,N,cols,v,ADD_VALUES));
15759566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY));
15769566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY));
15779566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(A,&v));
15789566063dSJacob Faibussowitsch   PetscCall(PetscFree2(rows,cols));
15798ea901baSHong Zhang 
1580511c6705SHong Zhang   if (reuse == MAT_INPLACE_MATRIX) {
15819566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A,&mat_elemental));
15828ea901baSHong Zhang   } else {
15838ea901baSHong Zhang     *newmat = mat_elemental;
15848ea901baSHong Zhang   }
15858baccfbdSHong Zhang   PetscFunctionReturn(0);
15868baccfbdSHong Zhang }
158765b80a83SHong Zhang #endif
15888baccfbdSHong Zhang 
1589af53bab2SHong Zhang static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A,PetscInt col,PetscScalar **vals)
159086aefd0dSHong Zhang {
159186aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
159286aefd0dSHong Zhang 
159386aefd0dSHong Zhang   PetscFunctionBegin;
15949566063dSJacob Faibussowitsch   PetscCall(MatDenseGetColumn(mat->A,col,vals));
159586aefd0dSHong Zhang   PetscFunctionReturn(0);
159686aefd0dSHong Zhang }
159786aefd0dSHong Zhang 
1598af53bab2SHong Zhang static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A,PetscScalar **vals)
159986aefd0dSHong Zhang {
160086aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
160186aefd0dSHong Zhang 
160286aefd0dSHong Zhang   PetscFunctionBegin;
16039566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreColumn(mat->A,vals));
160486aefd0dSHong Zhang   PetscFunctionReturn(0);
160586aefd0dSHong Zhang }
160686aefd0dSHong Zhang 
160794e2cb23SJakub Kruzik PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm,Mat inmat,PetscInt n,MatReuse scall,Mat *outmat)
160894e2cb23SJakub Kruzik {
160994e2cb23SJakub Kruzik   Mat_MPIDense   *mat;
161094e2cb23SJakub Kruzik   PetscInt       m,nloc,N;
161194e2cb23SJakub Kruzik 
161294e2cb23SJakub Kruzik   PetscFunctionBegin;
16139566063dSJacob Faibussowitsch   PetscCall(MatGetSize(inmat,&m,&N));
16149566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(inmat,NULL,&nloc));
161594e2cb23SJakub Kruzik   if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */
161694e2cb23SJakub Kruzik     PetscInt sum;
161794e2cb23SJakub Kruzik 
161894e2cb23SJakub Kruzik     if (n == PETSC_DECIDE) {
16199566063dSJacob Faibussowitsch       PetscCall(PetscSplitOwnership(comm,&n,&N));
162094e2cb23SJakub Kruzik     }
162194e2cb23SJakub Kruzik     /* Check sum(n) = N */
16221c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(&n,&sum,1,MPIU_INT,MPI_SUM,comm));
162308401ef6SPierre Jolivet     PetscCheck(sum == N,PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT,sum,N);
162494e2cb23SJakub Kruzik 
16259566063dSJacob Faibussowitsch     PetscCall(MatCreateDense(comm,m,n,PETSC_DETERMINE,N,NULL,outmat));
16269566063dSJacob Faibussowitsch     PetscCall(MatSetOption(*outmat,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE));
162794e2cb23SJakub Kruzik   }
162894e2cb23SJakub Kruzik 
162994e2cb23SJakub Kruzik   /* numeric phase */
163094e2cb23SJakub Kruzik   mat = (Mat_MPIDense*)(*outmat)->data;
16319566063dSJacob Faibussowitsch   PetscCall(MatCopy(inmat,mat->A,SAME_NONZERO_PATTERN));
163294e2cb23SJakub Kruzik   PetscFunctionReturn(0);
163394e2cb23SJakub Kruzik }
163494e2cb23SJakub Kruzik 
1635637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1636637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDenseCUDA_MPIDense(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1637637a0070SStefano Zampini {
1638637a0070SStefano Zampini   Mat            B;
1639637a0070SStefano Zampini   Mat_MPIDense   *m;
1640637a0070SStefano Zampini 
1641637a0070SStefano Zampini   PetscFunctionBegin;
1642637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
16439566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(M,MAT_COPY_VALUES,newmat));
1644637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
16459566063dSJacob Faibussowitsch     PetscCall(MatCopy(M,*newmat,SAME_NONZERO_PATTERN));
1646637a0070SStefano Zampini   }
1647637a0070SStefano Zampini 
1648637a0070SStefano Zampini   B    = *newmat;
16499566063dSJacob Faibussowitsch   PetscCall(MatBindToCPU_MPIDenseCUDA(B,PETSC_TRUE));
16509566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->defaultvectype));
16519566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(VECSTANDARD,&B->defaultvectype));
16529566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSE));
16539566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",NULL));
16549566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",NULL));
16559566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",NULL));
16569566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",NULL));
16579566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",NULL));
16589566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",NULL));
16599566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",NULL));
16609566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",NULL));
16619566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",NULL));
16629566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",NULL));
16639566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",NULL));
16649566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",NULL));
16659566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",NULL));
16669566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",NULL));
1667637a0070SStefano Zampini   m    = (Mat_MPIDense*)(B)->data;
1668637a0070SStefano Zampini   if (m->A) {
16699566063dSJacob Faibussowitsch     PetscCall(MatConvert(m->A,MATSEQDENSE,MAT_INPLACE_MATRIX,&m->A));
1670637a0070SStefano Zampini   }
1671637a0070SStefano Zampini   B->ops->bindtocpu = NULL;
1672637a0070SStefano Zampini   B->offloadmask    = PETSC_OFFLOAD_CPU;
1673637a0070SStefano Zampini   PetscFunctionReturn(0);
1674637a0070SStefano Zampini }
1675637a0070SStefano Zampini 
1676637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDense_MPIDenseCUDA(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1677637a0070SStefano Zampini {
1678637a0070SStefano Zampini   Mat            B;
1679637a0070SStefano Zampini   Mat_MPIDense   *m;
1680637a0070SStefano Zampini 
1681637a0070SStefano Zampini   PetscFunctionBegin;
1682637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
16839566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(M,MAT_COPY_VALUES,newmat));
1684637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
16859566063dSJacob Faibussowitsch     PetscCall(MatCopy(M,*newmat,SAME_NONZERO_PATTERN));
1686637a0070SStefano Zampini   }
1687637a0070SStefano Zampini 
1688637a0070SStefano Zampini   B    = *newmat;
16899566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->defaultvectype));
16909566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(VECCUDA,&B->defaultvectype));
16919566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSECUDA));
16929566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",                    MatConvert_MPIDenseCUDA_MPIDense));
16939566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",        MatProductSetFromOptions_MPIAIJ_MPIDense));
16949566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
16959566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",        MatProductSetFromOptions_MPIDense_MPIAIJ));
16969566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
16979566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",                                MatDenseCUDAGetArray_MPIDenseCUDA));
16989566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",                            MatDenseCUDAGetArrayRead_MPIDenseCUDA));
16999566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",                           MatDenseCUDAGetArrayWrite_MPIDenseCUDA));
17009566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",                            MatDenseCUDARestoreArray_MPIDenseCUDA));
17019566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",                        MatDenseCUDARestoreArrayRead_MPIDenseCUDA));
17029566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",                       MatDenseCUDARestoreArrayWrite_MPIDenseCUDA));
17039566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",                              MatDenseCUDAPlaceArray_MPIDenseCUDA));
17049566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",                              MatDenseCUDAResetArray_MPIDenseCUDA));
17059566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",                            MatDenseCUDAReplaceArray_MPIDenseCUDA));
1706f5ff9c66SStefano Zampini   m    = (Mat_MPIDense*)(B->data);
1707637a0070SStefano Zampini   if (m->A) {
17089566063dSJacob Faibussowitsch     PetscCall(MatConvert(m->A,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&m->A));
1709637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_BOTH;
1710637a0070SStefano Zampini   } else {
1711637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_UNALLOCATED;
1712637a0070SStefano Zampini   }
17139566063dSJacob Faibussowitsch   PetscCall(MatBindToCPU_MPIDenseCUDA(B,PETSC_FALSE));
1714637a0070SStefano Zampini 
1715637a0070SStefano Zampini   B->ops->bindtocpu = MatBindToCPU_MPIDenseCUDA;
1716637a0070SStefano Zampini   PetscFunctionReturn(0);
1717637a0070SStefano Zampini }
1718637a0070SStefano Zampini #endif
1719637a0070SStefano Zampini 
17206947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
17216947451fSStefano Zampini {
17226947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17236947451fSStefano Zampini   PetscInt       lda;
17246947451fSStefano Zampini 
17256947451fSStefano Zampini   PetscFunctionBegin;
172628b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
172728b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17286947451fSStefano Zampini   if (!a->cvec) {
17299566063dSJacob Faibussowitsch     PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
17306947451fSStefano Zampini   }
17316947451fSStefano Zampini   a->vecinuse = col + 1;
17329566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
17339566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(a->A,(PetscScalar**)&a->ptrinuse));
17349566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
17356947451fSStefano Zampini   *v   = a->cvec;
17366947451fSStefano Zampini   PetscFunctionReturn(0);
17376947451fSStefano Zampini }
17386947451fSStefano Zampini 
17396947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
17406947451fSStefano Zampini {
17416947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17426947451fSStefano Zampini 
17436947451fSStefano Zampini   PetscFunctionBegin;
174428b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
174528b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
17466947451fSStefano Zampini   a->vecinuse = 0;
17479566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(a->A,(PetscScalar**)&a->ptrinuse));
17489566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
17496947451fSStefano Zampini   *v   = NULL;
17506947451fSStefano Zampini   PetscFunctionReturn(0);
17516947451fSStefano Zampini }
17526947451fSStefano Zampini 
17536947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
17546947451fSStefano Zampini {
17556947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17566947451fSStefano Zampini   PetscInt       lda;
17576947451fSStefano Zampini 
17586947451fSStefano Zampini   PetscFunctionBegin;
175928b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
176028b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17616947451fSStefano Zampini   if (!a->cvec) {
17629566063dSJacob Faibussowitsch     PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
17636947451fSStefano Zampini   }
17646947451fSStefano Zampini   a->vecinuse = col + 1;
17659566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
17669566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&a->ptrinuse));
17679566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
17689566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(a->cvec));
17696947451fSStefano Zampini   *v   = a->cvec;
17706947451fSStefano Zampini   PetscFunctionReturn(0);
17716947451fSStefano Zampini }
17726947451fSStefano Zampini 
17736947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
17746947451fSStefano Zampini {
17756947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17766947451fSStefano Zampini 
17776947451fSStefano Zampini   PetscFunctionBegin;
17785f80ce2aSJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
17795f80ce2aSJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
17806947451fSStefano Zampini   a->vecinuse = 0;
17819566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&a->ptrinuse));
17829566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(a->cvec));
17839566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
17846947451fSStefano Zampini   *v   = NULL;
17856947451fSStefano Zampini   PetscFunctionReturn(0);
17866947451fSStefano Zampini }
17876947451fSStefano Zampini 
17886947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
17896947451fSStefano Zampini {
17906947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17916947451fSStefano Zampini   PetscInt       lda;
17926947451fSStefano Zampini 
17936947451fSStefano Zampini   PetscFunctionBegin;
17945f80ce2aSJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
17955f80ce2aSJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17966947451fSStefano Zampini   if (!a->cvec) {
17979566063dSJacob Faibussowitsch     PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
17986947451fSStefano Zampini   }
17996947451fSStefano Zampini   a->vecinuse = col + 1;
18009566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
18019566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
18029566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
18036947451fSStefano Zampini   *v   = a->cvec;
18046947451fSStefano Zampini   PetscFunctionReturn(0);
18056947451fSStefano Zampini }
18066947451fSStefano Zampini 
18076947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
18086947451fSStefano Zampini {
18096947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
18106947451fSStefano Zampini 
18116947451fSStefano Zampini   PetscFunctionBegin;
18125f80ce2aSJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
18135f80ce2aSJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
18146947451fSStefano Zampini   a->vecinuse = 0;
18159566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
18169566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
18176947451fSStefano Zampini   *v   = NULL;
18186947451fSStefano Zampini   PetscFunctionReturn(0);
18196947451fSStefano Zampini }
18206947451fSStefano Zampini 
18215ea7661aSPierre Jolivet PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A,PetscInt cbegin,PetscInt cend,Mat *v)
18225ea7661aSPierre Jolivet {
18235ea7661aSPierre Jolivet   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
1824616b8fbbSStefano Zampini   Mat_MPIDense *c;
1825616b8fbbSStefano Zampini   MPI_Comm     comm;
18265ea7661aSPierre Jolivet 
18275ea7661aSPierre Jolivet   PetscFunctionBegin;
18289566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
18295f80ce2aSJacob Faibussowitsch   PetscCheck(!a->vecinuse,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
18305f80ce2aSJacob Faibussowitsch   PetscCheck(!a->matinuse,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18315ea7661aSPierre Jolivet   if (!a->cmat) {
18329566063dSJacob Faibussowitsch     PetscCall(MatCreate(comm,&a->cmat));
18339566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cmat));
18349566063dSJacob Faibussowitsch     PetscCall(MatSetType(a->cmat,((PetscObject)A)->type_name));
18359566063dSJacob Faibussowitsch     PetscCall(PetscLayoutReference(A->rmap,&a->cmat->rmap));
18369566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetSize(a->cmat->cmap,cend-cbegin));
18379566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(a->cmat->cmap));
1838616b8fbbSStefano Zampini   } else if (cend-cbegin != a->cmat->cmap->N) {
18399566063dSJacob Faibussowitsch     PetscCall(PetscLayoutDestroy(&a->cmat->cmap));
18409566063dSJacob Faibussowitsch     PetscCall(PetscLayoutCreate(comm,&a->cmat->cmap));
18419566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetSize(a->cmat->cmap,cend-cbegin));
18429566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(a->cmat->cmap));
18435ea7661aSPierre Jolivet   }
1844616b8fbbSStefano Zampini   c = (Mat_MPIDense*)a->cmat->data;
18455f80ce2aSJacob Faibussowitsch   PetscCheck(!c->A,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18469566063dSJacob Faibussowitsch   PetscCall(MatDenseGetSubMatrix(a->A,cbegin,cend,&c->A));
1847616b8fbbSStefano Zampini   a->cmat->preallocated = PETSC_TRUE;
1848616b8fbbSStefano Zampini   a->cmat->assembled = PETSC_TRUE;
18495ea7661aSPierre Jolivet   a->matinuse = cbegin + 1;
18505ea7661aSPierre Jolivet   *v = a->cmat;
18515ea7661aSPierre Jolivet   PetscFunctionReturn(0);
18525ea7661aSPierre Jolivet }
18535ea7661aSPierre Jolivet 
18545ea7661aSPierre Jolivet PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A,Mat *v)
18555ea7661aSPierre Jolivet {
18565ea7661aSPierre Jolivet   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
1857616b8fbbSStefano Zampini   Mat_MPIDense *c;
18585ea7661aSPierre Jolivet 
18595ea7661aSPierre Jolivet   PetscFunctionBegin;
18605f80ce2aSJacob Faibussowitsch   PetscCheck(a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetSubMatrix() first");
18615f80ce2aSJacob Faibussowitsch   PetscCheck(a->cmat,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal matrix");
18625f80ce2aSJacob Faibussowitsch   PetscCheck(*v == a->cmat,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Not the matrix obtained from MatDenseGetSubMatrix()");
18635ea7661aSPierre Jolivet   a->matinuse = 0;
1864616b8fbbSStefano Zampini   c = (Mat_MPIDense*)a->cmat->data;
18659566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreSubMatrix(a->A,&c->A));
18665ea7661aSPierre Jolivet   *v = NULL;
18675ea7661aSPierre Jolivet   PetscFunctionReturn(0);
18685ea7661aSPierre Jolivet }
18695ea7661aSPierre Jolivet 
1870002bc6daSRichard Tran Mills /*MC
1871002bc6daSRichard Tran Mills    MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices.
1872002bc6daSRichard Tran Mills 
1873002bc6daSRichard Tran Mills    Options Database Keys:
1874002bc6daSRichard Tran Mills . -mat_type mpidense - sets the matrix type to "mpidense" during a call to MatSetFromOptions()
1875002bc6daSRichard Tran Mills 
1876002bc6daSRichard Tran Mills   Level: beginner
1877002bc6daSRichard Tran Mills 
1878db781477SPatrick Sanan .seealso: `MatCreateDense()`
1879002bc6daSRichard Tran Mills 
1880002bc6daSRichard Tran Mills M*/
18818cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreate_MPIDense(Mat mat)
1882273d9f13SBarry Smith {
1883273d9f13SBarry Smith   Mat_MPIDense   *a;
1884273d9f13SBarry Smith 
1885273d9f13SBarry Smith   PetscFunctionBegin;
18869566063dSJacob Faibussowitsch   PetscCall(PetscNewLog(mat,&a));
1887b0a32e0cSBarry Smith   mat->data = (void*)a;
18889566063dSJacob Faibussowitsch   PetscCall(PetscMemcpy(mat->ops,&MatOps_Values,sizeof(struct _MatOps)));
1889273d9f13SBarry Smith 
1890273d9f13SBarry Smith   mat->insertmode = NOT_SET_VALUES;
1891273d9f13SBarry Smith 
1892273d9f13SBarry Smith   /* build cache for off array entries formed */
1893273d9f13SBarry Smith   a->donotstash = PETSC_FALSE;
18942205254eSKarl Rupp 
18959566063dSJacob Faibussowitsch   PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat),1,&mat->stash));
1896273d9f13SBarry Smith 
1897273d9f13SBarry Smith   /* stuff used for matrix vector multiply */
1898f4259b30SLisandro Dalcin   a->lvec        = NULL;
1899f4259b30SLisandro Dalcin   a->Mvctx       = NULL;
1900273d9f13SBarry Smith   a->roworiented = PETSC_TRUE;
1901273d9f13SBarry Smith 
19029566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",MatDenseGetLDA_MPIDense));
19039566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",MatDenseSetLDA_MPIDense));
19049566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",MatDenseGetArray_MPIDense));
19059566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",MatDenseRestoreArray_MPIDense));
19069566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",MatDenseGetArrayRead_MPIDense));
19079566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",MatDenseRestoreArrayRead_MPIDense));
19089566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",MatDenseGetArrayWrite_MPIDense));
19099566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",MatDenseRestoreArrayWrite_MPIDense));
19109566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",MatDensePlaceArray_MPIDense));
19119566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",MatDenseResetArray_MPIDense));
19129566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",MatDenseReplaceArray_MPIDense));
19139566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense));
19149566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense));
19159566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense));
19169566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense));
19179566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense));
19189566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense));
19199566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",MatDenseGetSubMatrix_MPIDense));
19209566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",MatDenseRestoreSubMatrix_MPIDense));
19219566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpiaij_mpidense_C",MatConvert_MPIAIJ_MPIDense));
19229566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpiaij_C",MatConvert_MPIDense_MPIAIJ));
19238baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
19249566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",MatConvert_MPIDense_Elemental));
19258baccfbdSHong Zhang #endif
1926d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
19279566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",MatConvert_Dense_ScaLAPACK));
1928d24d4204SJose E. Roman #endif
1929637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
19309566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpidensecuda_C",MatConvert_MPIDense_MPIDenseCUDA));
1931637a0070SStefano Zampini #endif
19329566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",MatMPIDenseSetPreallocation_MPIDense));
19339566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
19349566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
19356718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
19369566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
19379566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
19386718818eSStefano Zampini #endif
19398949adfdSHong Zhang 
19409566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",MatDenseGetColumn_MPIDense));
19419566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",MatDenseRestoreColumn_MPIDense));
19429566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)mat,MATMPIDENSE));
1943273d9f13SBarry Smith   PetscFunctionReturn(0);
1944273d9f13SBarry Smith }
1945273d9f13SBarry Smith 
1946209238afSKris Buschelman /*MC
1947637a0070SStefano Zampini    MATMPIDENSECUDA - MATMPIDENSECUDA = "mpidensecuda" - A matrix type to be used for distributed dense matrices on GPUs.
1948637a0070SStefano Zampini 
1949637a0070SStefano Zampini    Options Database Keys:
1950637a0070SStefano Zampini . -mat_type mpidensecuda - sets the matrix type to "mpidensecuda" during a call to MatSetFromOptions()
1951637a0070SStefano Zampini 
1952637a0070SStefano Zampini   Level: beginner
1953637a0070SStefano Zampini 
1954637a0070SStefano Zampini .seealso:
1955637a0070SStefano Zampini 
1956637a0070SStefano Zampini M*/
1957637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1958a4af0ceeSJacob Faibussowitsch #include <petsc/private/deviceimpl.h>
1959637a0070SStefano Zampini PETSC_EXTERN PetscErrorCode MatCreate_MPIDenseCUDA(Mat B)
1960637a0070SStefano Zampini {
1961637a0070SStefano Zampini   PetscFunctionBegin;
19629566063dSJacob Faibussowitsch   PetscCall(PetscDeviceInitialize(PETSC_DEVICE_CUDA));
19639566063dSJacob Faibussowitsch   PetscCall(MatCreate_MPIDense(B));
19649566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_MPIDenseCUDA(B,MATMPIDENSECUDA,MAT_INPLACE_MATRIX,&B));
1965637a0070SStefano Zampini   PetscFunctionReturn(0);
1966637a0070SStefano Zampini }
1967637a0070SStefano Zampini #endif
1968637a0070SStefano Zampini 
1969637a0070SStefano Zampini /*MC
1970002d173eSKris Buschelman    MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices.
1971209238afSKris Buschelman 
1972209238afSKris Buschelman    This matrix type is identical to MATSEQDENSE when constructed with a single process communicator,
1973209238afSKris Buschelman    and MATMPIDENSE otherwise.
1974209238afSKris Buschelman 
1975209238afSKris Buschelman    Options Database Keys:
1976209238afSKris Buschelman . -mat_type dense - sets the matrix type to "dense" during a call to MatSetFromOptions()
1977209238afSKris Buschelman 
1978209238afSKris Buschelman   Level: beginner
1979209238afSKris Buschelman 
1980db781477SPatrick Sanan .seealso: `MATSEQDENSE,MATMPIDENSE,MATDENSECUDA`
19816947451fSStefano Zampini M*/
19826947451fSStefano Zampini 
19836947451fSStefano Zampini /*MC
19846947451fSStefano Zampini    MATDENSECUDA - MATDENSECUDA = "densecuda" - A matrix type to be used for dense matrices on GPUs.
19856947451fSStefano Zampini 
19866947451fSStefano Zampini    This matrix type is identical to MATSEQDENSECUDA when constructed with a single process communicator,
19876947451fSStefano Zampini    and MATMPIDENSECUDA otherwise.
19886947451fSStefano Zampini 
19896947451fSStefano Zampini    Options Database Keys:
19906947451fSStefano Zampini . -mat_type densecuda - sets the matrix type to "densecuda" during a call to MatSetFromOptions()
19916947451fSStefano Zampini 
19926947451fSStefano Zampini   Level: beginner
19936947451fSStefano Zampini 
1994db781477SPatrick Sanan .seealso: `MATSEQDENSECUDA,MATMPIDENSECUDA,MATDENSE`
1995209238afSKris Buschelman M*/
1996209238afSKris Buschelman 
1997273d9f13SBarry Smith /*@C
1998273d9f13SBarry Smith    MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries
1999273d9f13SBarry Smith 
20008f490ea3SStefano Zampini    Collective
2001273d9f13SBarry Smith 
2002273d9f13SBarry Smith    Input Parameters:
20031c4f3114SJed Brown .  B - the matrix
20040298fd71SBarry Smith -  data - optional location of matrix data.  Set data=NULL for PETSc
2005273d9f13SBarry Smith    to control all matrix memory allocation.
2006273d9f13SBarry Smith 
2007273d9f13SBarry Smith    Notes:
2008273d9f13SBarry Smith    The dense format is fully compatible with standard Fortran 77
2009273d9f13SBarry Smith    storage by columns.
2010273d9f13SBarry Smith 
2011273d9f13SBarry Smith    The data input variable is intended primarily for Fortran programmers
2012273d9f13SBarry Smith    who wish to allocate their own matrix memory space.  Most users should
20130298fd71SBarry Smith    set data=NULL.
2014273d9f13SBarry Smith 
2015273d9f13SBarry Smith    Level: intermediate
2016273d9f13SBarry Smith 
2017db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()`
2018273d9f13SBarry Smith @*/
20191c4f3114SJed Brown PetscErrorCode  MatMPIDenseSetPreallocation(Mat B,PetscScalar *data)
2020273d9f13SBarry Smith {
2021273d9f13SBarry Smith   PetscFunctionBegin;
2022d5ea218eSStefano Zampini   PetscValidHeaderSpecific(B,MAT_CLASSID,1);
2023cac4c232SBarry Smith   PetscTryMethod(B,"MatMPIDenseSetPreallocation_C",(Mat,PetscScalar*),(B,data));
2024273d9f13SBarry Smith   PetscFunctionReturn(0);
2025273d9f13SBarry Smith }
2026273d9f13SBarry Smith 
2027d3042a70SBarry Smith /*@
2028637a0070SStefano Zampini    MatDensePlaceArray - Allows one to replace the array in a dense matrix with an
2029d3042a70SBarry Smith    array provided by the user. This is useful to avoid copying an array
2030d3042a70SBarry Smith    into a matrix
2031d3042a70SBarry Smith 
2032d3042a70SBarry Smith    Not Collective
2033d3042a70SBarry Smith 
2034d3042a70SBarry Smith    Input Parameters:
2035d3042a70SBarry Smith +  mat - the matrix
2036d3042a70SBarry Smith -  array - the array in column major order
2037d3042a70SBarry Smith 
2038d3042a70SBarry Smith    Notes:
2039d3042a70SBarry Smith    You can return to the original array with a call to MatDenseResetArray(). The user is responsible for freeing this array; it will not be
2040d3042a70SBarry Smith    freed when the matrix is destroyed.
2041d3042a70SBarry Smith 
2042d3042a70SBarry Smith    Level: developer
2043d3042a70SBarry Smith 
2044db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`
2045d3042a70SBarry Smith 
2046d3042a70SBarry Smith @*/
2047637a0070SStefano Zampini PetscErrorCode  MatDensePlaceArray(Mat mat,const PetscScalar *array)
2048d3042a70SBarry Smith {
2049d3042a70SBarry Smith   PetscFunctionBegin;
2050d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2051cac4c232SBarry Smith   PetscUseMethod(mat,"MatDensePlaceArray_C",(Mat,const PetscScalar*),(mat,array));
20529566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2053637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2054637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2055637a0070SStefano Zampini #endif
2056d3042a70SBarry Smith   PetscFunctionReturn(0);
2057d3042a70SBarry Smith }
2058d3042a70SBarry Smith 
2059d3042a70SBarry Smith /*@
2060d3042a70SBarry Smith    MatDenseResetArray - Resets the matrix array to that it previously had before the call to MatDensePlaceArray()
2061d3042a70SBarry Smith 
2062d3042a70SBarry Smith    Not Collective
2063d3042a70SBarry Smith 
2064d3042a70SBarry Smith    Input Parameters:
2065d3042a70SBarry Smith .  mat - the matrix
2066d3042a70SBarry Smith 
2067d3042a70SBarry Smith    Notes:
2068d3042a70SBarry Smith    You can only call this after a call to MatDensePlaceArray()
2069d3042a70SBarry Smith 
2070d3042a70SBarry Smith    Level: developer
2071d3042a70SBarry Smith 
2072db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`
2073d3042a70SBarry Smith 
2074d3042a70SBarry Smith @*/
2075d3042a70SBarry Smith PetscErrorCode  MatDenseResetArray(Mat mat)
2076d3042a70SBarry Smith {
2077d3042a70SBarry Smith   PetscFunctionBegin;
2078d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2079cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseResetArray_C",(Mat),(mat));
20809566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2081d3042a70SBarry Smith   PetscFunctionReturn(0);
2082d3042a70SBarry Smith }
2083d3042a70SBarry Smith 
2084d5ea218eSStefano Zampini /*@
2085d5ea218eSStefano Zampini    MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an
2086d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2087d5ea218eSStefano Zampini    into a matrix
2088d5ea218eSStefano Zampini 
2089d5ea218eSStefano Zampini    Not Collective
2090d5ea218eSStefano Zampini 
2091d5ea218eSStefano Zampini    Input Parameters:
2092d5ea218eSStefano Zampini +  mat - the matrix
2093d5ea218eSStefano Zampini -  array - the array in column major order
2094d5ea218eSStefano Zampini 
2095d5ea218eSStefano Zampini    Notes:
2096d5ea218eSStefano Zampini    The memory passed in MUST be obtained with PetscMalloc() and CANNOT be
2097d5ea218eSStefano Zampini    freed by the user. It will be freed when the matrix is destroyed.
2098d5ea218eSStefano Zampini 
2099d5ea218eSStefano Zampini    Level: developer
2100d5ea218eSStefano Zampini 
2101db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `VecReplaceArray()`
2102d5ea218eSStefano Zampini @*/
2103d5ea218eSStefano Zampini PetscErrorCode  MatDenseReplaceArray(Mat mat,const PetscScalar *array)
2104d5ea218eSStefano Zampini {
2105d5ea218eSStefano Zampini   PetscFunctionBegin;
2106d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2107cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseReplaceArray_C",(Mat,const PetscScalar*),(mat,array));
21089566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2109d5ea218eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
2110d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2111d5ea218eSStefano Zampini #endif
2112d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2113d5ea218eSStefano Zampini }
2114d5ea218eSStefano Zampini 
2115637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
21168965ea79SLois Curfman McInnes /*@C
2117637a0070SStefano Zampini    MatDenseCUDAPlaceArray - Allows one to replace the GPU array in a dense matrix with an
2118637a0070SStefano Zampini    array provided by the user. This is useful to avoid copying an array
2119637a0070SStefano Zampini    into a matrix
2120637a0070SStefano Zampini 
2121637a0070SStefano Zampini    Not Collective
2122637a0070SStefano Zampini 
2123637a0070SStefano Zampini    Input Parameters:
2124637a0070SStefano Zampini +  mat - the matrix
2125637a0070SStefano Zampini -  array - the array in column major order
2126637a0070SStefano Zampini 
2127637a0070SStefano Zampini    Notes:
2128637a0070SStefano Zampini    You can return to the original array with a call to MatDenseCUDAResetArray(). The user is responsible for freeing this array; it will not be
2129637a0070SStefano Zampini    freed when the matrix is destroyed. The array must have been allocated with cudaMalloc().
2130637a0070SStefano Zampini 
2131637a0070SStefano Zampini    Level: developer
2132637a0070SStefano Zampini 
2133db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAResetArray()`
2134637a0070SStefano Zampini @*/
2135637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAPlaceArray(Mat mat,const PetscScalar *array)
2136637a0070SStefano Zampini {
2137637a0070SStefano Zampini   PetscFunctionBegin;
2138d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2139cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseCUDAPlaceArray_C",(Mat,const PetscScalar*),(mat,array));
21409566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2141637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2142637a0070SStefano Zampini   PetscFunctionReturn(0);
2143637a0070SStefano Zampini }
2144637a0070SStefano Zampini 
2145637a0070SStefano Zampini /*@C
2146637a0070SStefano Zampini    MatDenseCUDAResetArray - Resets the matrix array to that it previously had before the call to MatDenseCUDAPlaceArray()
2147637a0070SStefano Zampini 
2148637a0070SStefano Zampini    Not Collective
2149637a0070SStefano Zampini 
2150637a0070SStefano Zampini    Input Parameters:
2151637a0070SStefano Zampini .  mat - the matrix
2152637a0070SStefano Zampini 
2153637a0070SStefano Zampini    Notes:
2154637a0070SStefano Zampini    You can only call this after a call to MatDenseCUDAPlaceArray()
2155637a0070SStefano Zampini 
2156637a0070SStefano Zampini    Level: developer
2157637a0070SStefano Zampini 
2158db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAPlaceArray()`
2159637a0070SStefano Zampini 
2160637a0070SStefano Zampini @*/
2161637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAResetArray(Mat mat)
2162637a0070SStefano Zampini {
2163637a0070SStefano Zampini   PetscFunctionBegin;
2164d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2165cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseCUDAResetArray_C",(Mat),(mat));
21669566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2167637a0070SStefano Zampini   PetscFunctionReturn(0);
2168637a0070SStefano Zampini }
2169637a0070SStefano Zampini 
2170637a0070SStefano Zampini /*@C
2171d5ea218eSStefano Zampini    MatDenseCUDAReplaceArray - Allows one to replace the GPU array in a dense matrix with an
2172d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2173d5ea218eSStefano Zampini    into a matrix
2174d5ea218eSStefano Zampini 
2175d5ea218eSStefano Zampini    Not Collective
2176d5ea218eSStefano Zampini 
2177d5ea218eSStefano Zampini    Input Parameters:
2178d5ea218eSStefano Zampini +  mat - the matrix
2179d5ea218eSStefano Zampini -  array - the array in column major order
2180d5ea218eSStefano Zampini 
2181d5ea218eSStefano Zampini    Notes:
2182d5ea218eSStefano Zampini    This permanently replaces the GPU array and frees the memory associated with the old GPU array.
2183d5ea218eSStefano Zampini    The memory passed in CANNOT be freed by the user. It will be freed
2184d5ea218eSStefano Zampini    when the matrix is destroyed. The array should respect the matrix leading dimension.
2185d5ea218eSStefano Zampini 
2186d5ea218eSStefano Zampini    Level: developer
2187d5ea218eSStefano Zampini 
2188db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAPlaceArray()`, `MatDenseCUDAResetArray()`
2189d5ea218eSStefano Zampini @*/
2190d5ea218eSStefano Zampini PetscErrorCode  MatDenseCUDAReplaceArray(Mat mat,const PetscScalar *array)
2191d5ea218eSStefano Zampini {
2192d5ea218eSStefano Zampini   PetscFunctionBegin;
2193d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2194cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseCUDAReplaceArray_C",(Mat,const PetscScalar*),(mat,array));
21959566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2196d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2197d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2198d5ea218eSStefano Zampini }
2199d5ea218eSStefano Zampini 
2200d5ea218eSStefano Zampini /*@C
2201637a0070SStefano Zampini    MatDenseCUDAGetArrayWrite - Provides write access to the CUDA buffer inside a dense matrix.
2202637a0070SStefano Zampini 
2203637a0070SStefano Zampini    Not Collective
2204637a0070SStefano Zampini 
2205637a0070SStefano Zampini    Input Parameters:
2206637a0070SStefano Zampini .  A - the matrix
2207637a0070SStefano Zampini 
2208637a0070SStefano Zampini    Output Parameters
2209637a0070SStefano Zampini .  array - the GPU array in column major order
2210637a0070SStefano Zampini 
2211637a0070SStefano Zampini    Notes:
2212637a0070SStefano Zampini    The data on the GPU may not be updated due to operations done on the CPU. If you need updated data, use MatDenseCUDAGetArray(). The array must be restored with MatDenseCUDARestoreArrayWrite() when no longer needed.
2213637a0070SStefano Zampini 
2214637a0070SStefano Zampini    Level: developer
2215637a0070SStefano Zampini 
2216db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayRead()`, `MatDenseCUDARestoreArrayRead()`
2217637a0070SStefano Zampini @*/
2218637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayWrite(Mat A, PetscScalar **a)
2219637a0070SStefano Zampini {
2220637a0070SStefano Zampini   PetscFunctionBegin;
2221d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2222cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDAGetArrayWrite_C",(Mat,PetscScalar**),(A,a));
22239566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2224637a0070SStefano Zampini   PetscFunctionReturn(0);
2225637a0070SStefano Zampini }
2226637a0070SStefano Zampini 
2227637a0070SStefano Zampini /*@C
2228637a0070SStefano Zampini    MatDenseCUDARestoreArrayWrite - Restore write access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArrayWrite().
2229637a0070SStefano Zampini 
2230637a0070SStefano Zampini    Not Collective
2231637a0070SStefano Zampini 
2232637a0070SStefano Zampini    Input Parameters:
2233637a0070SStefano Zampini +  A - the matrix
2234637a0070SStefano Zampini -  array - the GPU array in column major order
2235637a0070SStefano Zampini 
2236637a0070SStefano Zampini    Notes:
2237637a0070SStefano Zampini 
2238637a0070SStefano Zampini    Level: developer
2239637a0070SStefano Zampini 
2240db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`, `MatDenseCUDAGetArrayRead()`
2241637a0070SStefano Zampini @*/
2242637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayWrite(Mat A, PetscScalar **a)
2243637a0070SStefano Zampini {
2244637a0070SStefano Zampini   PetscFunctionBegin;
2245d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2246cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDARestoreArrayWrite_C",(Mat,PetscScalar**),(A,a));
22479566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2248637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2249637a0070SStefano Zampini   PetscFunctionReturn(0);
2250637a0070SStefano Zampini }
2251637a0070SStefano Zampini 
2252637a0070SStefano Zampini /*@C
2253637a0070SStefano Zampini    MatDenseCUDAGetArrayRead - Provides read-only access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArrayRead() when no longer needed.
2254637a0070SStefano Zampini 
2255637a0070SStefano Zampini    Not Collective
2256637a0070SStefano Zampini 
2257637a0070SStefano Zampini    Input Parameters:
2258637a0070SStefano Zampini .  A - the matrix
2259637a0070SStefano Zampini 
2260637a0070SStefano Zampini    Output Parameters
2261637a0070SStefano Zampini .  array - the GPU array in column major order
2262637a0070SStefano Zampini 
2263637a0070SStefano Zampini    Notes:
2264637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2265637a0070SStefano Zampini 
2266637a0070SStefano Zampini    Level: developer
2267637a0070SStefano Zampini 
2268db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`
2269637a0070SStefano Zampini @*/
2270637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayRead(Mat A, const PetscScalar **a)
2271637a0070SStefano Zampini {
2272637a0070SStefano Zampini   PetscFunctionBegin;
2273d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2274cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDAGetArrayRead_C",(Mat,const PetscScalar**),(A,a));
2275637a0070SStefano Zampini   PetscFunctionReturn(0);
2276637a0070SStefano Zampini }
2277637a0070SStefano Zampini 
2278637a0070SStefano Zampini /*@C
2279637a0070SStefano Zampini    MatDenseCUDARestoreArrayRead - Restore read-only access to the CUDA buffer inside a dense matrix previously obtained with a call to MatDenseCUDAGetArrayRead().
2280637a0070SStefano Zampini 
2281637a0070SStefano Zampini    Not Collective
2282637a0070SStefano Zampini 
2283637a0070SStefano Zampini    Input Parameters:
2284637a0070SStefano Zampini +  A - the matrix
2285637a0070SStefano Zampini -  array - the GPU array in column major order
2286637a0070SStefano Zampini 
2287637a0070SStefano Zampini    Notes:
2288637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2289637a0070SStefano Zampini 
2290637a0070SStefano Zampini    Level: developer
2291637a0070SStefano Zampini 
2292db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDAGetArrayRead()`
2293637a0070SStefano Zampini @*/
2294637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayRead(Mat A, const PetscScalar **a)
2295637a0070SStefano Zampini {
2296637a0070SStefano Zampini   PetscFunctionBegin;
2297cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDARestoreArrayRead_C",(Mat,const PetscScalar**),(A,a));
2298637a0070SStefano Zampini   PetscFunctionReturn(0);
2299637a0070SStefano Zampini }
2300637a0070SStefano Zampini 
2301637a0070SStefano Zampini /*@C
2302637a0070SStefano Zampini    MatDenseCUDAGetArray - Provides access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArray() when no longer needed.
2303637a0070SStefano Zampini 
2304637a0070SStefano Zampini    Not Collective
2305637a0070SStefano Zampini 
2306637a0070SStefano Zampini    Input Parameters:
2307637a0070SStefano Zampini .  A - the matrix
2308637a0070SStefano Zampini 
2309637a0070SStefano Zampini    Output Parameters
2310637a0070SStefano Zampini .  array - the GPU array in column major order
2311637a0070SStefano Zampini 
2312637a0070SStefano Zampini    Notes:
2313637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite(). For read-only access, use MatDenseCUDAGetArrayRead().
2314637a0070SStefano Zampini 
2315637a0070SStefano Zampini    Level: developer
2316637a0070SStefano Zampini 
2317db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArrayRead()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`
2318637a0070SStefano Zampini @*/
2319637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArray(Mat A, PetscScalar **a)
2320637a0070SStefano Zampini {
2321637a0070SStefano Zampini   PetscFunctionBegin;
2322d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2323cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDAGetArray_C",(Mat,PetscScalar**),(A,a));
23249566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2325637a0070SStefano Zampini   PetscFunctionReturn(0);
2326637a0070SStefano Zampini }
2327637a0070SStefano Zampini 
2328637a0070SStefano Zampini /*@C
2329637a0070SStefano Zampini    MatDenseCUDARestoreArray - Restore access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArray().
2330637a0070SStefano Zampini 
2331637a0070SStefano Zampini    Not Collective
2332637a0070SStefano Zampini 
2333637a0070SStefano Zampini    Input Parameters:
2334637a0070SStefano Zampini +  A - the matrix
2335637a0070SStefano Zampini -  array - the GPU array in column major order
2336637a0070SStefano Zampini 
2337637a0070SStefano Zampini    Notes:
2338637a0070SStefano Zampini 
2339637a0070SStefano Zampini    Level: developer
2340637a0070SStefano Zampini 
2341db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`, `MatDenseCUDAGetArrayRead()`
2342637a0070SStefano Zampini @*/
2343637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArray(Mat A, PetscScalar **a)
2344637a0070SStefano Zampini {
2345637a0070SStefano Zampini   PetscFunctionBegin;
2346d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2347cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDARestoreArray_C",(Mat,PetscScalar**),(A,a));
23489566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2349637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2350637a0070SStefano Zampini   PetscFunctionReturn(0);
2351637a0070SStefano Zampini }
2352637a0070SStefano Zampini #endif
2353637a0070SStefano Zampini 
2354637a0070SStefano Zampini /*@C
2355637a0070SStefano Zampini    MatCreateDense - Creates a matrix in dense format.
23568965ea79SLois Curfman McInnes 
2357d083f849SBarry Smith    Collective
2358db81eaa0SLois Curfman McInnes 
23598965ea79SLois Curfman McInnes    Input Parameters:
2360db81eaa0SLois Curfman McInnes +  comm - MPI communicator
23618965ea79SLois Curfman McInnes .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2362db81eaa0SLois Curfman McInnes .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
23638965ea79SLois Curfman McInnes .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2364db81eaa0SLois Curfman McInnes .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
23656cfe35ddSJose E. Roman -  data - optional location of matrix data.  Set data=NULL (PETSC_NULL_SCALAR for Fortran users) for PETSc
2366dfc5480cSLois Curfman McInnes    to control all matrix memory allocation.
23678965ea79SLois Curfman McInnes 
23688965ea79SLois Curfman McInnes    Output Parameter:
2369477f1c0bSLois Curfman McInnes .  A - the matrix
23708965ea79SLois Curfman McInnes 
2371b259b22eSLois Curfman McInnes    Notes:
237239ddd567SLois Curfman McInnes    The dense format is fully compatible with standard Fortran 77
237339ddd567SLois Curfman McInnes    storage by columns.
2374002bc6daSRichard Tran Mills    Note that, although local portions of the matrix are stored in column-major
2375002bc6daSRichard Tran Mills    order, the matrix is partitioned across MPI ranks by row.
23768965ea79SLois Curfman McInnes 
237718f449edSLois Curfman McInnes    The data input variable is intended primarily for Fortran programmers
237818f449edSLois Curfman McInnes    who wish to allocate their own matrix memory space.  Most users should
23796cfe35ddSJose E. Roman    set data=NULL (PETSC_NULL_SCALAR for Fortran users).
238018f449edSLois Curfman McInnes 
23818965ea79SLois Curfman McInnes    The user MUST specify either the local or global matrix dimensions
23828965ea79SLois Curfman McInnes    (possibly both).
23838965ea79SLois Curfman McInnes 
2384027ccd11SLois Curfman McInnes    Level: intermediate
2385027ccd11SLois Curfman McInnes 
2386db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()`
23878965ea79SLois Curfman McInnes @*/
238869b1f4b7SBarry Smith PetscErrorCode  MatCreateDense(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
23898965ea79SLois Curfman McInnes {
23903a40ed3dSBarry Smith   PetscFunctionBegin;
23919566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm,A));
23929566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A,m,n,M,N));
23936f08ad05SPierre Jolivet   PetscCall(MatSetType(*A,MATDENSE));
23949566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseSetPreallocation(*A,data));
23956f08ad05SPierre Jolivet   PetscCall(MatMPIDenseSetPreallocation(*A,data));
23963a40ed3dSBarry Smith   PetscFunctionReturn(0);
23978965ea79SLois Curfman McInnes }
23988965ea79SLois Curfman McInnes 
2399637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2400637a0070SStefano Zampini /*@C
2401637a0070SStefano Zampini    MatCreateDenseCUDA - Creates a matrix in dense format using CUDA.
2402637a0070SStefano Zampini 
2403637a0070SStefano Zampini    Collective
2404637a0070SStefano Zampini 
2405637a0070SStefano Zampini    Input Parameters:
2406637a0070SStefano Zampini +  comm - MPI communicator
2407637a0070SStefano Zampini .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2408637a0070SStefano Zampini .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
2409637a0070SStefano Zampini .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2410637a0070SStefano Zampini .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
2411637a0070SStefano Zampini -  data - optional location of GPU matrix data.  Set data=NULL for PETSc
2412637a0070SStefano Zampini    to control matrix memory allocation.
2413637a0070SStefano Zampini 
2414637a0070SStefano Zampini    Output Parameter:
2415637a0070SStefano Zampini .  A - the matrix
2416637a0070SStefano Zampini 
2417637a0070SStefano Zampini    Notes:
2418637a0070SStefano Zampini 
2419637a0070SStefano Zampini    Level: intermediate
2420637a0070SStefano Zampini 
2421db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateDense()`
2422637a0070SStefano Zampini @*/
2423637a0070SStefano Zampini PetscErrorCode  MatCreateDenseCUDA(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
2424637a0070SStefano Zampini {
2425637a0070SStefano Zampini   PetscFunctionBegin;
24269566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm,A));
2427637a0070SStefano Zampini   PetscValidLogicalCollectiveBool(*A,!!data,6);
24289566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A,m,n,M,N));
24296f08ad05SPierre Jolivet   PetscCall(MatSetType(*A,MATDENSECUDA));
24309566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseCUDASetPreallocation(*A,data));
24316f08ad05SPierre Jolivet   PetscCall(MatMPIDenseCUDASetPreallocation(*A,data));
2432637a0070SStefano Zampini   PetscFunctionReturn(0);
2433637a0070SStefano Zampini }
2434637a0070SStefano Zampini #endif
2435637a0070SStefano Zampini 
24366849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat A,MatDuplicateOption cpvalues,Mat *newmat)
24378965ea79SLois Curfman McInnes {
24388965ea79SLois Curfman McInnes   Mat            mat;
24393501a2bdSLois Curfman McInnes   Mat_MPIDense   *a,*oldmat = (Mat_MPIDense*)A->data;
24408965ea79SLois Curfman McInnes 
24413a40ed3dSBarry Smith   PetscFunctionBegin;
2442f4259b30SLisandro Dalcin   *newmat = NULL;
24439566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&mat));
24449566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(mat,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N));
24459566063dSJacob Faibussowitsch   PetscCall(MatSetType(mat,((PetscObject)A)->type_name));
2446834f8fabSBarry Smith   a       = (Mat_MPIDense*)mat->data;
24475aa7edbeSHong Zhang 
2448d5f3da31SBarry Smith   mat->factortype   = A->factortype;
2449c456f294SBarry Smith   mat->assembled    = PETSC_TRUE;
2450273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
24518965ea79SLois Curfman McInnes 
2452e0fa3b82SLois Curfman McInnes   mat->insertmode = NOT_SET_VALUES;
24533782ba37SSatish Balay   a->donotstash   = oldmat->donotstash;
2454e04c1aa4SHong Zhang 
24559566063dSJacob Faibussowitsch   PetscCall(PetscLayoutReference(A->rmap,&mat->rmap));
24569566063dSJacob Faibussowitsch   PetscCall(PetscLayoutReference(A->cmap,&mat->cmap));
24578965ea79SLois Curfman McInnes 
24589566063dSJacob Faibussowitsch   PetscCall(MatDuplicate(oldmat->A,cpvalues,&a->A));
24599566063dSJacob Faibussowitsch   PetscCall(PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A));
246001b82886SBarry Smith 
24618965ea79SLois Curfman McInnes   *newmat = mat;
24623a40ed3dSBarry Smith   PetscFunctionReturn(0);
24638965ea79SLois Curfman McInnes }
24648965ea79SLois Curfman McInnes 
2465eb91f321SVaclav Hapla PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer)
2466eb91f321SVaclav Hapla {
246787d5ce66SSatish Balay   PetscBool      isbinary;
246887d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
246987d5ce66SSatish Balay   PetscBool      ishdf5;
247087d5ce66SSatish Balay #endif
2471eb91f321SVaclav Hapla 
2472eb91f321SVaclav Hapla   PetscFunctionBegin;
2473eb91f321SVaclav Hapla   PetscValidHeaderSpecific(newMat,MAT_CLASSID,1);
2474eb91f321SVaclav Hapla   PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2);
2475eb91f321SVaclav Hapla   /* force binary viewer to load .info file if it has not yet done so */
24769566063dSJacob Faibussowitsch   PetscCall(PetscViewerSetUp(viewer));
24779566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary));
247887d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
24799566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERHDF5,  &ishdf5));
248087d5ce66SSatish Balay #endif
2481eb91f321SVaclav Hapla   if (isbinary) {
24829566063dSJacob Faibussowitsch     PetscCall(MatLoad_Dense_Binary(newMat,viewer));
2483eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5)
248487d5ce66SSatish Balay   } else if (ishdf5) {
24859566063dSJacob Faibussowitsch     PetscCall(MatLoad_Dense_HDF5(newMat,viewer));
2486eb91f321SVaclav Hapla #endif
248798921bdaSJacob Faibussowitsch   } else SETERRQ(PetscObjectComm((PetscObject)newMat),PETSC_ERR_SUP,"Viewer type %s not yet supported for reading %s matrices",((PetscObject)viewer)->type_name,((PetscObject)newMat)->type_name);
2488eb91f321SVaclav Hapla   PetscFunctionReturn(0);
2489eb91f321SVaclav Hapla }
2490eb91f321SVaclav Hapla 
24916718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat A,Mat B,PetscBool *flag)
24926e4ee0c6SHong Zhang {
24936e4ee0c6SHong Zhang   Mat_MPIDense   *matB = (Mat_MPIDense*)B->data,*matA = (Mat_MPIDense*)A->data;
24946e4ee0c6SHong Zhang   Mat            a,b;
249590ace30eSBarry Smith 
24966e4ee0c6SHong Zhang   PetscFunctionBegin;
24976e4ee0c6SHong Zhang   a    = matA->A;
24986e4ee0c6SHong Zhang   b    = matB->A;
24992cf15c64SPierre Jolivet   PetscCall(MatEqual(a,b,flag));
25002cf15c64SPierre Jolivet   PetscCall(MPIU_Allreduce(MPI_IN_PLACE,flag,1,MPIU_BOOL,MPI_LAND,PetscObjectComm((PetscObject)A)));
25016e4ee0c6SHong Zhang   PetscFunctionReturn(0);
25026e4ee0c6SHong Zhang }
250390ace30eSBarry Smith 
25046718818eSStefano Zampini PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data)
2505baa3c1c6SHong Zhang {
25066718818eSStefano Zampini   Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data;
2507baa3c1c6SHong Zhang 
2508baa3c1c6SHong Zhang   PetscFunctionBegin;
25099566063dSJacob Faibussowitsch   PetscCall(PetscFree2(atb->sendbuf,atb->recvcounts));
25109566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&atb->atb));
25119566063dSJacob Faibussowitsch   PetscCall(PetscFree(atb));
2512baa3c1c6SHong Zhang   PetscFunctionReturn(0);
2513baa3c1c6SHong Zhang }
2514baa3c1c6SHong Zhang 
25156718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data)
2516cc48ffa7SToby Isaac {
25176718818eSStefano Zampini   Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data;
2518cc48ffa7SToby Isaac 
2519cc48ffa7SToby Isaac   PetscFunctionBegin;
25209566063dSJacob Faibussowitsch   PetscCall(PetscFree2(abt->buf[0],abt->buf[1]));
25219566063dSJacob Faibussowitsch   PetscCall(PetscFree2(abt->recvcounts,abt->recvdispls));
25229566063dSJacob Faibussowitsch   PetscCall(PetscFree(abt));
2523cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2524cc48ffa7SToby Isaac }
2525cc48ffa7SToby Isaac 
25266718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2527cb20be35SHong Zhang {
2528baa3c1c6SHong Zhang   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
25296718818eSStefano Zampini   Mat_TransMatMultDense *atb;
2530cb20be35SHong Zhang   MPI_Comm              comm;
25316718818eSStefano Zampini   PetscMPIInt           size,*recvcounts;
25326718818eSStefano Zampini   PetscScalar           *carray,*sendbuf;
2533637a0070SStefano Zampini   const PetscScalar     *atbarray;
2534a1f9a5e6SStefano Zampini   PetscInt              i,cN=C->cmap->N,proc,k,j,lda;
2535e68c0b26SHong Zhang   const PetscInt        *ranges;
2536cb20be35SHong Zhang 
2537cb20be35SHong Zhang   PetscFunctionBegin;
25386718818eSStefano Zampini   MatCheckProduct(C,3);
25395f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
25406718818eSStefano Zampini   atb = (Mat_TransMatMultDense *)C->product->data;
25416718818eSStefano Zampini   recvcounts = atb->recvcounts;
25426718818eSStefano Zampini   sendbuf = atb->sendbuf;
25436718818eSStefano Zampini 
25449566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
25459566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
2546e68c0b26SHong Zhang 
2547c5ef1628SHong Zhang   /* compute atbarray = aseq^T * bseq */
25489566063dSJacob Faibussowitsch   PetscCall(MatTransposeMatMult(a->A,b->A,atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX,PETSC_DEFAULT,&atb->atb));
2549cb20be35SHong Zhang 
25509566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(C,&ranges));
2551cb20be35SHong Zhang 
2552660d5466SHong Zhang   /* arrange atbarray into sendbuf */
25539566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(atb->atb,&atbarray));
25549566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(atb->atb,&lda));
2555637a0070SStefano Zampini   for (proc=0, k=0; proc<size; proc++) {
2556baa3c1c6SHong Zhang     for (j=0; j<cN; j++) {
2557a1f9a5e6SStefano Zampini       for (i=ranges[proc]; i<ranges[proc+1]; i++) sendbuf[k++] = atbarray[i+j*lda];
2558cb20be35SHong Zhang     }
2559cb20be35SHong Zhang   }
25609566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(atb->atb,&atbarray));
2561637a0070SStefano Zampini 
2562c5ef1628SHong Zhang   /* sum all atbarray to local values of C */
25639566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A,&carray));
25649566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Reduce_scatter(sendbuf,carray,recvcounts,MPIU_SCALAR,MPIU_SUM,comm));
25659566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A,&carray));
25669566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
25679566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2568cb20be35SHong Zhang   PetscFunctionReturn(0);
2569cb20be35SHong Zhang }
2570cb20be35SHong Zhang 
25716718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2572cb20be35SHong Zhang {
2573cb20be35SHong Zhang   MPI_Comm              comm;
2574baa3c1c6SHong Zhang   PetscMPIInt           size;
2575660d5466SHong Zhang   PetscInt              cm=A->cmap->n,cM,cN=B->cmap->N;
2576baa3c1c6SHong Zhang   Mat_TransMatMultDense *atb;
25776718818eSStefano Zampini   PetscBool             cisdense;
25780acaeb71SStefano Zampini   PetscInt              i;
25790acaeb71SStefano Zampini   const PetscInt        *ranges;
2580cb20be35SHong Zhang 
2581cb20be35SHong Zhang   PetscFunctionBegin;
25826718818eSStefano Zampini   MatCheckProduct(C,3);
25835f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
25849566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
2585cb20be35SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) {
258698921bdaSJacob Faibussowitsch     SETERRQ(comm,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2587cb20be35SHong Zhang   }
2588cb20be35SHong Zhang 
25894222ddf1SHong Zhang   /* create matrix product C */
25909566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C,cm,B->cmap->n,A->cmap->N,B->cmap->N));
25919566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompareAny((PetscObject)C,&cisdense,MATMPIDENSE,MATMPIDENSECUDA,""));
25926718818eSStefano Zampini   if (!cisdense) {
25939566063dSJacob Faibussowitsch     PetscCall(MatSetType(C,((PetscObject)A)->type_name));
25946718818eSStefano Zampini   }
25959566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
2596baa3c1c6SHong Zhang 
25974222ddf1SHong Zhang   /* create data structure for reuse C */
25989566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
25999566063dSJacob Faibussowitsch   PetscCall(PetscNew(&atb));
26004222ddf1SHong Zhang   cM   = C->rmap->N;
26019566063dSJacob Faibussowitsch   PetscCall(PetscMalloc2(cM*cN,&atb->sendbuf,size,&atb->recvcounts));
26029566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(C,&ranges));
26030acaeb71SStefano Zampini   for (i=0; i<size; i++) atb->recvcounts[i] = (ranges[i+1] - ranges[i])*cN;
2604baa3c1c6SHong Zhang 
26056718818eSStefano Zampini   C->product->data    = atb;
26066718818eSStefano Zampini   C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense;
2607cb20be35SHong Zhang   PetscFunctionReturn(0);
2608cb20be35SHong Zhang }
2609cb20be35SHong Zhang 
26104222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C)
2611cb20be35SHong Zhang {
2612cc48ffa7SToby Isaac   MPI_Comm              comm;
2613cc48ffa7SToby Isaac   PetscMPIInt           i, size;
2614cc48ffa7SToby Isaac   PetscInt              maxRows, bufsiz;
2615cc48ffa7SToby Isaac   PetscMPIInt           tag;
26164222ddf1SHong Zhang   PetscInt              alg;
2617cc48ffa7SToby Isaac   Mat_MatTransMultDense *abt;
26184222ddf1SHong Zhang   Mat_Product           *product = C->product;
26194222ddf1SHong Zhang   PetscBool             flg;
2620cc48ffa7SToby Isaac 
2621cc48ffa7SToby Isaac   PetscFunctionBegin;
26226718818eSStefano Zampini   MatCheckProduct(C,4);
26235f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
26244222ddf1SHong Zhang   /* check local size of A and B */
26255f80ce2aSJacob Faibussowitsch   PetscCheck(A->cmap->n == B->cmap->n,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")",A->cmap->n,B->cmap->n);
2626cc48ffa7SToby Isaac 
26279566063dSJacob Faibussowitsch   PetscCall(PetscStrcmp(product->alg,"allgatherv",&flg));
2628637a0070SStefano Zampini   alg  = flg ? 0 : 1;
2629cc48ffa7SToby Isaac 
26304222ddf1SHong Zhang   /* setup matrix product C */
26319566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C,A->rmap->n,B->rmap->n,A->rmap->N,B->rmap->N));
26329566063dSJacob Faibussowitsch   PetscCall(MatSetType(C,MATMPIDENSE));
26339566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
26349566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetNewTag((PetscObject)C,&tag));
26354222ddf1SHong Zhang 
26364222ddf1SHong Zhang   /* create data structure for reuse C */
26379566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)C,&comm));
26389566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
26399566063dSJacob Faibussowitsch   PetscCall(PetscNew(&abt));
2640cc48ffa7SToby Isaac   abt->tag = tag;
2641faa55883SToby Isaac   abt->alg = alg;
2642faa55883SToby Isaac   switch (alg) {
26434222ddf1SHong Zhang   case 1: /* alg: "cyclic" */
2644cc48ffa7SToby Isaac     for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i]));
2645cc48ffa7SToby Isaac     bufsiz = A->cmap->N * maxRows;
26469566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(bufsiz,&(abt->buf[0]),bufsiz,&(abt->buf[1])));
2647faa55883SToby Isaac     break;
26484222ddf1SHong Zhang   default: /* alg: "allgatherv" */
26499566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &(abt->buf[0]), B->rmap->N * B->cmap->N, &(abt->buf[1])));
26509566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(size,&(abt->recvcounts),size+1,&(abt->recvdispls)));
2651faa55883SToby Isaac     for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N;
2652faa55883SToby Isaac     for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i];
2653faa55883SToby Isaac     break;
2654faa55883SToby Isaac   }
2655cc48ffa7SToby Isaac 
26566718818eSStefano Zampini   C->product->data    = abt;
26576718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense;
26584222ddf1SHong Zhang   C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense;
2659cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2660cc48ffa7SToby Isaac }
2661cc48ffa7SToby Isaac 
2662faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C)
2663cc48ffa7SToby Isaac {
2664cc48ffa7SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
26656718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2666cc48ffa7SToby Isaac   MPI_Comm              comm;
2667cc48ffa7SToby Isaac   PetscMPIInt           rank,size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom;
2668f4259b30SLisandro Dalcin   PetscScalar           *sendbuf, *recvbuf=NULL, *cv;
2669cc48ffa7SToby Isaac   PetscInt              i,cK=A->cmap->N,k,j,bn;
2670cc48ffa7SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2671637a0070SStefano Zampini   const PetscScalar     *av,*bv;
267223fff9afSBarry Smith   PetscBLASInt          cm, cn, ck, alda, blda = 0, clda;
2673cc48ffa7SToby Isaac   MPI_Request           reqs[2];
2674cc48ffa7SToby Isaac   const PetscInt        *ranges;
2675cc48ffa7SToby Isaac 
2676cc48ffa7SToby Isaac   PetscFunctionBegin;
26776718818eSStefano Zampini   MatCheckProduct(C,3);
26785f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
26796718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
26809566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)C,&comm));
26819566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_rank(comm,&rank));
26829566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
26839566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&av));
26849566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(b->A,&bv));
26859566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A,&cv));
26869566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&i));
26879566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&alda));
26889566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(b->A,&i));
26899566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&blda));
26909566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(c->A,&i));
26919566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&clda));
26929566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(B,&ranges));
2693cc48ffa7SToby Isaac   bn   = B->rmap->n;
2694637a0070SStefano Zampini   if (blda == bn) {
2695637a0070SStefano Zampini     sendbuf = (PetscScalar*)bv;
2696cc48ffa7SToby Isaac   } else {
2697cc48ffa7SToby Isaac     sendbuf = abt->buf[0];
2698cc48ffa7SToby Isaac     for (k = 0, i = 0; i < cK; i++) {
2699cc48ffa7SToby Isaac       for (j = 0; j < bn; j++, k++) {
2700637a0070SStefano Zampini         sendbuf[k] = bv[i * blda + j];
2701cc48ffa7SToby Isaac       }
2702cc48ffa7SToby Isaac     }
2703cc48ffa7SToby Isaac   }
2704cc48ffa7SToby Isaac   if (size > 1) {
2705cc48ffa7SToby Isaac     sendto = (rank + size - 1) % size;
2706cc48ffa7SToby Isaac     recvfrom = (rank + size + 1) % size;
2707cc48ffa7SToby Isaac   } else {
2708cc48ffa7SToby Isaac     sendto = recvfrom = 0;
2709cc48ffa7SToby Isaac   }
27109566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(cK,&ck));
27119566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->rmap->n,&cm));
2712cc48ffa7SToby Isaac   recvisfrom = rank;
2713cc48ffa7SToby Isaac   for (i = 0; i < size; i++) {
2714cc48ffa7SToby Isaac     /* we have finished receiving in sending, bufs can be read/modified */
2715cc48ffa7SToby Isaac     PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */
2716cc48ffa7SToby Isaac     PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom];
2717cc48ffa7SToby Isaac 
2718cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2719cc48ffa7SToby Isaac       /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */
2720cc48ffa7SToby Isaac       sendsiz = cK * bn;
2721cc48ffa7SToby Isaac       recvsiz = cK * nextbn;
2722cc48ffa7SToby Isaac       recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1];
27239566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0]));
27249566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1]));
2725cc48ffa7SToby Isaac     }
2726cc48ffa7SToby Isaac 
2727cc48ffa7SToby Isaac     /* local aseq * sendbuf^T */
27289566063dSJacob Faibussowitsch     PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn));
272950ce3c9cSStefano Zampini     if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","T",&cm,&cn,&ck,&_DOne,av,&alda,sendbuf,&cn,&_DZero,cv + clda * ranges[recvisfrom],&clda));
2730cc48ffa7SToby Isaac 
2731cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2732cc48ffa7SToby Isaac       /* wait for the sends and receives to complete, swap sendbuf and recvbuf */
27339566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE));
2734cc48ffa7SToby Isaac     }
2735cc48ffa7SToby Isaac     bn = nextbn;
2736cc48ffa7SToby Isaac     recvisfrom = nextrecvisfrom;
2737cc48ffa7SToby Isaac     sendbuf = recvbuf;
2738cc48ffa7SToby Isaac   }
27399566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&av));
27409566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A,&bv));
27419566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A,&cv));
27429566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
27439566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2744cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2745cc48ffa7SToby Isaac }
2746cc48ffa7SToby Isaac 
2747faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C)
2748faa55883SToby Isaac {
2749faa55883SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
27506718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2751faa55883SToby Isaac   MPI_Comm              comm;
2752637a0070SStefano Zampini   PetscMPIInt           size;
2753637a0070SStefano Zampini   PetscScalar           *cv, *sendbuf, *recvbuf;
2754637a0070SStefano Zampini   const PetscScalar     *av,*bv;
2755637a0070SStefano Zampini   PetscInt              blda,i,cK=A->cmap->N,k,j,bn;
2756faa55883SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2757637a0070SStefano Zampini   PetscBLASInt          cm, cn, ck, alda, clda;
2758faa55883SToby Isaac 
2759faa55883SToby Isaac   PetscFunctionBegin;
27606718818eSStefano Zampini   MatCheckProduct(C,3);
27615f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
27626718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
27639566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
27649566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
27659566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&av));
27669566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(b->A,&bv));
27679566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A,&cv));
27689566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&i));
27699566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&alda));
27709566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(b->A,&blda));
27719566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(c->A,&i));
27729566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&clda));
2773faa55883SToby Isaac   /* copy transpose of B into buf[0] */
2774faa55883SToby Isaac   bn      = B->rmap->n;
2775faa55883SToby Isaac   sendbuf = abt->buf[0];
2776faa55883SToby Isaac   recvbuf = abt->buf[1];
2777faa55883SToby Isaac   for (k = 0, j = 0; j < bn; j++) {
2778faa55883SToby Isaac     for (i = 0; i < cK; i++, k++) {
2779637a0070SStefano Zampini       sendbuf[k] = bv[i * blda + j];
2780faa55883SToby Isaac     }
2781faa55883SToby Isaac   }
27829566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A,&bv));
27839566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm));
27849566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(cK,&ck));
27859566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->rmap->n,&cm));
27869566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->cmap->n,&cn));
278750ce3c9cSStefano Zampini   if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","N",&cm,&cn,&ck,&_DOne,av,&alda,recvbuf,&ck,&_DZero,cv,&clda));
27889566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&av));
27899566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A,&bv));
27909566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A,&cv));
27919566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
27929566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2793faa55883SToby Isaac   PetscFunctionReturn(0);
2794faa55883SToby Isaac }
2795faa55883SToby Isaac 
2796faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C)
2797faa55883SToby Isaac {
27986718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2799faa55883SToby Isaac 
2800faa55883SToby Isaac   PetscFunctionBegin;
28016718818eSStefano Zampini   MatCheckProduct(C,3);
28025f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
28036718818eSStefano Zampini   abt = (Mat_MatTransMultDense*)C->product->data;
2804faa55883SToby Isaac   switch (abt->alg) {
2805faa55883SToby Isaac   case 1:
28069566063dSJacob Faibussowitsch     PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C));
2807faa55883SToby Isaac     break;
2808faa55883SToby Isaac   default:
28099566063dSJacob Faibussowitsch     PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C));
2810faa55883SToby Isaac     break;
2811faa55883SToby Isaac   }
2812faa55883SToby Isaac   PetscFunctionReturn(0);
2813faa55883SToby Isaac }
2814faa55883SToby Isaac 
28156718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data)
2816320f2790SHong Zhang {
28176718818eSStefano Zampini   Mat_MatMultDense *ab = (Mat_MatMultDense*)data;
2818320f2790SHong Zhang 
2819320f2790SHong Zhang   PetscFunctionBegin;
28209566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Ce));
28219566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Ae));
28229566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Be));
28239566063dSJacob Faibussowitsch   PetscCall(PetscFree(ab));
2824320f2790SHong Zhang   PetscFunctionReturn(0);
2825320f2790SHong Zhang }
2826320f2790SHong Zhang 
28275242a7b1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
2828320f2790SHong Zhang PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2829320f2790SHong Zhang {
28306718818eSStefano Zampini   Mat_MatMultDense *ab;
2831320f2790SHong Zhang 
2832320f2790SHong Zhang   PetscFunctionBegin;
28336718818eSStefano Zampini   MatCheckProduct(C,3);
28345f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing product data");
28356718818eSStefano Zampini   ab   = (Mat_MatMultDense*)C->product->data;
28369566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_Elemental(A,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Ae));
28379566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_Elemental(B,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Be));
28389566063dSJacob Faibussowitsch   PetscCall(MatMatMultNumeric_Elemental(ab->Ae,ab->Be,ab->Ce));
28399566063dSJacob Faibussowitsch   PetscCall(MatConvert(ab->Ce,MATMPIDENSE,MAT_REUSE_MATRIX,&C));
2840320f2790SHong Zhang   PetscFunctionReturn(0);
2841320f2790SHong Zhang }
2842320f2790SHong Zhang 
28436718818eSStefano Zampini static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2844320f2790SHong Zhang {
2845320f2790SHong Zhang   Mat              Ae,Be,Ce;
2846320f2790SHong Zhang   Mat_MatMultDense *ab;
2847320f2790SHong Zhang 
2848320f2790SHong Zhang   PetscFunctionBegin;
28496718818eSStefano Zampini   MatCheckProduct(C,4);
28505f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
28514222ddf1SHong Zhang   /* check local size of A and B */
2852320f2790SHong Zhang   if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend) {
285398921bdaSJacob Faibussowitsch     SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2854320f2790SHong Zhang   }
2855320f2790SHong Zhang 
28564222ddf1SHong Zhang   /* create elemental matrices Ae and Be */
28579566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &Ae));
28589566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(Ae,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N));
28599566063dSJacob Faibussowitsch   PetscCall(MatSetType(Ae,MATELEMENTAL));
28609566063dSJacob Faibussowitsch   PetscCall(MatSetUp(Ae));
28619566063dSJacob Faibussowitsch   PetscCall(MatSetOption(Ae,MAT_ROW_ORIENTED,PETSC_FALSE));
2862320f2790SHong Zhang 
28639566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &Be));
28649566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(Be,PETSC_DECIDE,PETSC_DECIDE,B->rmap->N,B->cmap->N));
28659566063dSJacob Faibussowitsch   PetscCall(MatSetType(Be,MATELEMENTAL));
28669566063dSJacob Faibussowitsch   PetscCall(MatSetUp(Be));
28679566063dSJacob Faibussowitsch   PetscCall(MatSetOption(Be,MAT_ROW_ORIENTED,PETSC_FALSE));
2868320f2790SHong Zhang 
28694222ddf1SHong Zhang   /* compute symbolic Ce = Ae*Be */
28709566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)C),&Ce));
28719566063dSJacob Faibussowitsch   PetscCall(MatMatMultSymbolic_Elemental(Ae,Be,fill,Ce));
28724222ddf1SHong Zhang 
28734222ddf1SHong Zhang   /* setup C */
28749566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C,A->rmap->n,B->cmap->n,PETSC_DECIDE,PETSC_DECIDE));
28759566063dSJacob Faibussowitsch   PetscCall(MatSetType(C,MATDENSE));
28769566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
2877320f2790SHong Zhang 
2878320f2790SHong Zhang   /* create data structure for reuse Cdense */
28799566063dSJacob Faibussowitsch   PetscCall(PetscNew(&ab));
2880320f2790SHong Zhang   ab->Ae = Ae;
2881320f2790SHong Zhang   ab->Be = Be;
2882320f2790SHong Zhang   ab->Ce = Ce;
28836718818eSStefano Zampini 
28846718818eSStefano Zampini   C->product->data    = ab;
28856718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense;
28864222ddf1SHong Zhang   C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense;
2887320f2790SHong Zhang   PetscFunctionReturn(0);
2888320f2790SHong Zhang }
28894222ddf1SHong Zhang #endif
28904222ddf1SHong Zhang /* ----------------------------------------------- */
28914222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
28924222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C)
2893320f2790SHong Zhang {
2894320f2790SHong Zhang   PetscFunctionBegin;
28954222ddf1SHong Zhang   C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense;
28964222ddf1SHong Zhang   C->ops->productsymbolic = MatProductSymbolic_AB;
2897320f2790SHong Zhang   PetscFunctionReturn(0);
2898320f2790SHong Zhang }
28995242a7b1SHong Zhang #endif
290086aefd0dSHong Zhang 
29014222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C)
29024222ddf1SHong Zhang {
29034222ddf1SHong Zhang   Mat_Product *product = C->product;
29044222ddf1SHong Zhang   Mat         A = product->A,B=product->B;
29054222ddf1SHong Zhang 
29064222ddf1SHong Zhang   PetscFunctionBegin;
29074222ddf1SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend)
290898921bdaSJacob Faibussowitsch     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
29096718818eSStefano Zampini   C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense;
29106718818eSStefano Zampini   C->ops->productsymbolic = MatProductSymbolic_AtB;
29114222ddf1SHong Zhang   PetscFunctionReturn(0);
29124222ddf1SHong Zhang }
29134222ddf1SHong Zhang 
29144222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C)
29154222ddf1SHong Zhang {
29164222ddf1SHong Zhang   Mat_Product    *product = C->product;
29174222ddf1SHong Zhang   const char     *algTypes[2] = {"allgatherv","cyclic"};
29184222ddf1SHong Zhang   PetscInt       alg,nalg = 2;
29194222ddf1SHong Zhang   PetscBool      flg = PETSC_FALSE;
29204222ddf1SHong Zhang 
29214222ddf1SHong Zhang   PetscFunctionBegin;
29224222ddf1SHong Zhang   /* Set default algorithm */
29234222ddf1SHong Zhang   alg = 0; /* default is allgatherv */
29249566063dSJacob Faibussowitsch   PetscCall(PetscStrcmp(product->alg,"default",&flg));
29254222ddf1SHong Zhang   if (flg) {
29269566063dSJacob Faibussowitsch     PetscCall(MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]));
29274222ddf1SHong Zhang   }
29284222ddf1SHong Zhang 
29294222ddf1SHong Zhang   /* Get runtime option */
29304222ddf1SHong Zhang   if (product->api_user) {
2931d0609cedSBarry Smith     PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatMatTransposeMult","Mat");
29329566063dSJacob Faibussowitsch     PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via","Algorithmic approach","MatMatTransposeMult",algTypes,nalg,algTypes[alg],&alg,&flg));
2933d0609cedSBarry Smith     PetscOptionsEnd();
29344222ddf1SHong Zhang   } else {
2935d0609cedSBarry Smith     PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatProduct_ABt","Mat");
29369566063dSJacob Faibussowitsch     PetscCall(PetscOptionsEList("-mat_product_algorithm","Algorithmic approach","MatProduct_ABt",algTypes,nalg,algTypes[alg],&alg,&flg));
2937d0609cedSBarry Smith     PetscOptionsEnd();
29384222ddf1SHong Zhang   }
29394222ddf1SHong Zhang   if (flg) {
29409566063dSJacob Faibussowitsch     PetscCall(MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]));
29414222ddf1SHong Zhang   }
29424222ddf1SHong Zhang 
29434222ddf1SHong Zhang   C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense;
29444222ddf1SHong Zhang   C->ops->productsymbolic          = MatProductSymbolic_ABt;
29454222ddf1SHong Zhang   PetscFunctionReturn(0);
29464222ddf1SHong Zhang }
29474222ddf1SHong Zhang 
29484222ddf1SHong Zhang PETSC_INTERN PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C)
29494222ddf1SHong Zhang {
29504222ddf1SHong Zhang   Mat_Product    *product = C->product;
29514222ddf1SHong Zhang 
29524222ddf1SHong Zhang   PetscFunctionBegin;
29534222ddf1SHong Zhang   switch (product->type) {
29544222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
29554222ddf1SHong Zhang   case MATPRODUCT_AB:
29569566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_MPIDense_AB(C));
29574222ddf1SHong Zhang     break;
29584222ddf1SHong Zhang #endif
29594222ddf1SHong Zhang   case MATPRODUCT_AtB:
29609566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_MPIDense_AtB(C));
29614222ddf1SHong Zhang     break;
29624222ddf1SHong Zhang   case MATPRODUCT_ABt:
29639566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_MPIDense_ABt(C));
29644222ddf1SHong Zhang     break;
29656718818eSStefano Zampini   default:
29666718818eSStefano Zampini     break;
29674222ddf1SHong Zhang   }
29684222ddf1SHong Zhang   PetscFunctionReturn(0);
29694222ddf1SHong Zhang }
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