xref: /petsc/src/mat/impls/dense/mpi/mpidense.c (revision 28b400f66ebc7ae0049166a2294dfcd3df27e64b)
1be1d678aSKris Buschelman 
2ed3cc1f0SBarry Smith /*
3ed3cc1f0SBarry Smith    Basic functions for basic parallel dense matrices.
4ed3cc1f0SBarry Smith */
5ed3cc1f0SBarry Smith 
6c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h>    /*I   "petscmat.h"  I*/
78949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h>
8baa3c1c6SHong Zhang #include <petscblaslapack.h>
98965ea79SLois Curfman McInnes 
10ab92ecdeSBarry Smith /*@
11ab92ecdeSBarry Smith 
12ab92ecdeSBarry Smith       MatDenseGetLocalMatrix - For a MATMPIDENSE or MATSEQDENSE matrix returns the sequential
13ab92ecdeSBarry Smith               matrix that represents the operator. For sequential matrices it returns itself.
14ab92ecdeSBarry Smith 
15ab92ecdeSBarry Smith     Input Parameter:
16ab92ecdeSBarry Smith .      A - the Seq or MPI dense matrix
17ab92ecdeSBarry Smith 
18ab92ecdeSBarry Smith     Output Parameter:
19ab92ecdeSBarry Smith .      B - the inner matrix
20ab92ecdeSBarry Smith 
218e6c10adSSatish Balay     Level: intermediate
228e6c10adSSatish Balay 
23ab92ecdeSBarry Smith @*/
24ab92ecdeSBarry Smith PetscErrorCode MatDenseGetLocalMatrix(Mat A,Mat *B)
25ab92ecdeSBarry Smith {
26ab92ecdeSBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
27ace3abfcSBarry Smith   PetscBool      flg;
28ab92ecdeSBarry Smith 
29ab92ecdeSBarry Smith   PetscFunctionBegin;
30d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
31d5ea218eSStefano Zampini   PetscValidPointer(B,2);
325f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectBaseTypeCompare((PetscObject)A,MATMPIDENSE,&flg));
332205254eSKarl Rupp   if (flg) *B = mat->A;
34f140bc17SStefano Zampini   else {
355f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectBaseTypeCompare((PetscObject)A,MATSEQDENSE,&flg));
36*28b400f6SJacob Faibussowitsch     PetscCheck(flg,PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Not for matrix type %s",((PetscObject)A)->type_name);
37f140bc17SStefano Zampini     *B = A;
38f140bc17SStefano Zampini   }
39ab92ecdeSBarry Smith   PetscFunctionReturn(0);
40ab92ecdeSBarry Smith }
41ab92ecdeSBarry Smith 
42a76f77c3SStefano Zampini PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s)
43a76f77c3SStefano Zampini {
44a76f77c3SStefano Zampini   Mat_MPIDense   *Amat = (Mat_MPIDense*)A->data;
45a76f77c3SStefano Zampini   Mat_MPIDense   *Bmat = (Mat_MPIDense*)B->data;
46a76f77c3SStefano Zampini 
47a76f77c3SStefano Zampini   PetscFunctionBegin;
485f80ce2aSJacob Faibussowitsch   CHKERRQ(MatCopy(Amat->A,Bmat->A,s));
49a76f77c3SStefano Zampini   PetscFunctionReturn(0);
50a76f77c3SStefano Zampini }
51a76f77c3SStefano Zampini 
52ba8c8a56SBarry Smith PetscErrorCode MatGetRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
53ba8c8a56SBarry Smith {
54ba8c8a56SBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
55d0f46423SBarry Smith   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
56ba8c8a56SBarry Smith 
57ba8c8a56SBarry Smith   PetscFunctionBegin;
582c71b3e2SJacob Faibussowitsch   PetscCheckFalse(row < rstart || row >= rend,PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
59ba8c8a56SBarry Smith   lrow = row - rstart;
605f80ce2aSJacob Faibussowitsch   CHKERRQ(MatGetRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v));
61ba8c8a56SBarry Smith   PetscFunctionReturn(0);
62ba8c8a56SBarry Smith }
63ba8c8a56SBarry Smith 
64637a0070SStefano Zampini PetscErrorCode MatRestoreRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
65ba8c8a56SBarry Smith {
66637a0070SStefano Zampini   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
67637a0070SStefano Zampini   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
68ba8c8a56SBarry Smith 
69ba8c8a56SBarry Smith   PetscFunctionBegin;
702c71b3e2SJacob Faibussowitsch   PetscCheckFalse(row < rstart || row >= rend,PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
71637a0070SStefano Zampini   lrow = row - rstart;
725f80ce2aSJacob Faibussowitsch   CHKERRQ(MatRestoreRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v));
73ba8c8a56SBarry Smith   PetscFunctionReturn(0);
74ba8c8a56SBarry Smith }
75ba8c8a56SBarry Smith 
7611bd1e4dSLisandro Dalcin PetscErrorCode  MatGetDiagonalBlock_MPIDense(Mat A,Mat *a)
770de54da6SSatish Balay {
780de54da6SSatish Balay   Mat_MPIDense   *mdn = (Mat_MPIDense*)A->data;
79d0f46423SBarry Smith   PetscInt       m = A->rmap->n,rstart = A->rmap->rstart;
8087828ca2SBarry Smith   PetscScalar    *array;
810de54da6SSatish Balay   MPI_Comm       comm;
824b6ae80fSStefano Zampini   PetscBool      flg;
8311bd1e4dSLisandro Dalcin   Mat            B;
840de54da6SSatish Balay 
850de54da6SSatish Balay   PetscFunctionBegin;
865f80ce2aSJacob Faibussowitsch   CHKERRQ(MatHasCongruentLayouts(A,&flg));
87*28b400f6SJacob Faibussowitsch   PetscCheck(flg,PETSC_COMM_SELF,PETSC_ERR_SUP,"Only square matrices supported.");
885f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectQuery((PetscObject)A,"DiagonalBlock",(PetscObject*)&B));
89616b8fbbSStefano Zampini   if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */
904b6ae80fSStefano Zampini 
915f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectTypeCompare((PetscObject)mdn->A,MATSEQDENSECUDA,&flg));
92*28b400f6SJacob Faibussowitsch     PetscCheck(!flg,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature",MATSEQDENSECUDA);
935f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectGetComm((PetscObject)(mdn->A),&comm));
945f80ce2aSJacob Faibussowitsch     CHKERRQ(MatCreate(comm,&B));
955f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetSizes(B,m,m,m,m));
965f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetType(B,((PetscObject)mdn->A)->type_name));
975f80ce2aSJacob Faibussowitsch     CHKERRQ(MatDenseGetArrayRead(mdn->A,(const PetscScalar**)&array));
985f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSeqDenseSetPreallocation(B,array+m*rstart));
995f80ce2aSJacob Faibussowitsch     CHKERRQ(MatDenseRestoreArrayRead(mdn->A,(const PetscScalar**)&array));
1005f80ce2aSJacob Faibussowitsch     CHKERRQ(MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY));
1015f80ce2aSJacob Faibussowitsch     CHKERRQ(MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY));
1025f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectCompose((PetscObject)A,"DiagonalBlock",(PetscObject)B));
10311bd1e4dSLisandro Dalcin     *a   = B;
1045f80ce2aSJacob Faibussowitsch     CHKERRQ(MatDestroy(&B));
1052205254eSKarl Rupp   } else *a = B;
1060de54da6SSatish Balay   PetscFunctionReturn(0);
1070de54da6SSatish Balay }
1080de54da6SSatish Balay 
10913f74950SBarry Smith PetscErrorCode MatSetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],const PetscScalar v[],InsertMode addv)
1108965ea79SLois Curfman McInnes {
11139b7565bSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)mat->data;
112d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
113ace3abfcSBarry Smith   PetscBool      roworiented = A->roworiented;
1148965ea79SLois Curfman McInnes 
1153a40ed3dSBarry Smith   PetscFunctionBegin;
1168965ea79SLois Curfman McInnes   for (i=0; i<m; i++) {
1175ef9f2a5SBarry Smith     if (idxm[i] < 0) continue;
1182c71b3e2SJacob Faibussowitsch     PetscCheckFalse(idxm[i] >= mat->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
1198965ea79SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
1208965ea79SLois Curfman McInnes       row = idxm[i] - rstart;
12139b7565bSBarry Smith       if (roworiented) {
1225f80ce2aSJacob Faibussowitsch         CHKERRQ(MatSetValues(A->A,1,&row,n,idxn,v+i*n,addv));
1233a40ed3dSBarry Smith       } else {
1248965ea79SLois Curfman McInnes         for (j=0; j<n; j++) {
1255ef9f2a5SBarry Smith           if (idxn[j] < 0) continue;
1262c71b3e2SJacob Faibussowitsch           PetscCheckFalse(idxn[j] >= mat->cmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
1275f80ce2aSJacob Faibussowitsch           CHKERRQ(MatSetValues(A->A,1,&row,1,&idxn[j],v+i+j*m,addv));
12839b7565bSBarry Smith         }
1298965ea79SLois Curfman McInnes       }
1302205254eSKarl Rupp     } else if (!A->donotstash) {
1315080c13bSMatthew G Knepley       mat->assembled = PETSC_FALSE;
13239b7565bSBarry Smith       if (roworiented) {
1335f80ce2aSJacob Faibussowitsch         CHKERRQ(MatStashValuesRow_Private(&mat->stash,idxm[i],n,idxn,v+i*n,PETSC_FALSE));
134d36fbae8SSatish Balay       } else {
1355f80ce2aSJacob Faibussowitsch         CHKERRQ(MatStashValuesCol_Private(&mat->stash,idxm[i],n,idxn,v+i,m,PETSC_FALSE));
13639b7565bSBarry Smith       }
137b49de8d1SLois Curfman McInnes     }
138b49de8d1SLois Curfman McInnes   }
1393a40ed3dSBarry Smith   PetscFunctionReturn(0);
140b49de8d1SLois Curfman McInnes }
141b49de8d1SLois Curfman McInnes 
14213f74950SBarry Smith PetscErrorCode MatGetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],PetscScalar v[])
143b49de8d1SLois Curfman McInnes {
144b49de8d1SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
145d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
146b49de8d1SLois Curfman McInnes 
1473a40ed3dSBarry Smith   PetscFunctionBegin;
148b49de8d1SLois Curfman McInnes   for (i=0; i<m; i++) {
14954c59aa7SJacob Faibussowitsch     if (idxm[i] < 0) continue; /* negative row */
15054c59aa7SJacob Faibussowitsch     PetscCheck(idxm[i] < mat->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
151b49de8d1SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
152b49de8d1SLois Curfman McInnes       row = idxm[i] - rstart;
153b49de8d1SLois Curfman McInnes       for (j=0; j<n; j++) {
15454c59aa7SJacob Faibussowitsch         if (idxn[j] < 0) continue; /* negative column */
15554c59aa7SJacob Faibussowitsch         PetscCheck(idxn[j] < mat->cmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
1565f80ce2aSJacob Faibussowitsch         CHKERRQ(MatGetValues(mdn->A,1,&row,1,&idxn[j],v+i*n+j));
157b49de8d1SLois Curfman McInnes       }
158e7e72b3dSBarry Smith     } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only local values currently supported");
1598965ea79SLois Curfman McInnes   }
1603a40ed3dSBarry Smith   PetscFunctionReturn(0);
1618965ea79SLois Curfman McInnes }
1628965ea79SLois Curfman McInnes 
16349a6ff4bSBarry Smith static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A,PetscInt *lda)
16449a6ff4bSBarry Smith {
16549a6ff4bSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
16649a6ff4bSBarry Smith 
16749a6ff4bSBarry Smith   PetscFunctionBegin;
1685f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(a->A,lda));
16949a6ff4bSBarry Smith   PetscFunctionReturn(0);
17049a6ff4bSBarry Smith }
17149a6ff4bSBarry Smith 
172ad16ce7aSStefano Zampini static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A,PetscInt lda)
173ad16ce7aSStefano Zampini {
174ad16ce7aSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17517359960SJose E. Roman   PetscBool      iscuda;
176ad16ce7aSStefano Zampini 
177ad16ce7aSStefano Zampini   PetscFunctionBegin;
17817359960SJose E. Roman   if (!a->A) {
179*28b400f6SJacob Faibussowitsch     PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1805f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLayoutSetUp(A->rmap));
1815f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLayoutSetUp(A->cmap));
1825f80ce2aSJacob Faibussowitsch     CHKERRQ(MatCreate(PETSC_COMM_SELF,&a->A));
1835f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogObjectParent((PetscObject)A,(PetscObject)a->A));
1845f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetSizes(a->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N));
1855f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda));
1865f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE));
18717359960SJose E. Roman   }
1885f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseSetLDA(a->A,lda));
189ad16ce7aSStefano Zampini   PetscFunctionReturn(0);
190ad16ce7aSStefano Zampini }
191ad16ce7aSStefano Zampini 
192637a0070SStefano Zampini static PetscErrorCode MatDenseGetArray_MPIDense(Mat A,PetscScalar **array)
193ff14e315SSatish Balay {
194ff14e315SSatish Balay   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
195ff14e315SSatish Balay 
1963a40ed3dSBarry Smith   PetscFunctionBegin;
197*28b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1985f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArray(a->A,array));
1993a40ed3dSBarry Smith   PetscFunctionReturn(0);
200ff14e315SSatish Balay }
201ff14e315SSatish Balay 
202637a0070SStefano Zampini static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A,const PetscScalar **array)
2038572280aSBarry Smith {
2048572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2058572280aSBarry Smith 
2068572280aSBarry Smith   PetscFunctionBegin;
207*28b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2085f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayRead(a->A,array));
2098572280aSBarry Smith   PetscFunctionReturn(0);
2108572280aSBarry Smith }
2118572280aSBarry Smith 
2126947451fSStefano Zampini static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A,PetscScalar **array)
2136947451fSStefano Zampini {
2146947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2156947451fSStefano Zampini 
2166947451fSStefano Zampini   PetscFunctionBegin;
217*28b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2185f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayWrite(a->A,array));
2196947451fSStefano Zampini   PetscFunctionReturn(0);
2206947451fSStefano Zampini }
2216947451fSStefano Zampini 
222637a0070SStefano Zampini static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A,const PetscScalar *array)
223d3042a70SBarry Smith {
224d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
225d3042a70SBarry Smith 
226d3042a70SBarry Smith   PetscFunctionBegin;
227*28b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
228*28b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2295f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDensePlaceArray(a->A,array));
230d3042a70SBarry Smith   PetscFunctionReturn(0);
231d3042a70SBarry Smith }
232d3042a70SBarry Smith 
233d3042a70SBarry Smith static PetscErrorCode MatDenseResetArray_MPIDense(Mat A)
234d3042a70SBarry Smith {
235d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
236d3042a70SBarry Smith 
237d3042a70SBarry Smith   PetscFunctionBegin;
238*28b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
239*28b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2405f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseResetArray(a->A));
241d3042a70SBarry Smith   PetscFunctionReturn(0);
242d3042a70SBarry Smith }
243d3042a70SBarry Smith 
244d5ea218eSStefano Zampini static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A,const PetscScalar *array)
245d5ea218eSStefano Zampini {
246d5ea218eSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
247d5ea218eSStefano Zampini 
248d5ea218eSStefano Zampini   PetscFunctionBegin;
249*28b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
250*28b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2515f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseReplaceArray(a->A,array));
252d5ea218eSStefano Zampini   PetscFunctionReturn(0);
253d5ea218eSStefano Zampini }
254d5ea218eSStefano Zampini 
2557dae84e0SHong Zhang static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B)
256ca3fa75bSLois Curfman McInnes {
257ca3fa75bSLois Curfman McInnes   Mat_MPIDense      *mat  = (Mat_MPIDense*)A->data,*newmatd;
258637a0070SStefano Zampini   PetscInt          lda,i,j,rstart,rend,nrows,ncols,Ncols,nlrows,nlcols;
2595d0c19d7SBarry Smith   const PetscInt    *irow,*icol;
260637a0070SStefano Zampini   const PetscScalar *v;
261637a0070SStefano Zampini   PetscScalar       *bv;
262ca3fa75bSLois Curfman McInnes   Mat               newmat;
2634aa3045dSJed Brown   IS                iscol_local;
26442a884f0SBarry Smith   MPI_Comm          comm_is,comm_mat;
265ca3fa75bSLois Curfman McInnes 
266ca3fa75bSLois Curfman McInnes   PetscFunctionBegin;
2675f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectGetComm((PetscObject)A,&comm_mat));
2685f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectGetComm((PetscObject)iscol,&comm_is));
2692c71b3e2SJacob Faibussowitsch   PetscCheckFalse(comm_mat != comm_is,PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"IS communicator must match matrix communicator");
27042a884f0SBarry Smith 
2715f80ce2aSJacob Faibussowitsch   CHKERRQ(ISAllGather(iscol,&iscol_local));
2725f80ce2aSJacob Faibussowitsch   CHKERRQ(ISGetIndices(isrow,&irow));
2735f80ce2aSJacob Faibussowitsch   CHKERRQ(ISGetIndices(iscol_local,&icol));
2745f80ce2aSJacob Faibussowitsch   CHKERRQ(ISGetLocalSize(isrow,&nrows));
2755f80ce2aSJacob Faibussowitsch   CHKERRQ(ISGetLocalSize(iscol,&ncols));
2765f80ce2aSJacob Faibussowitsch   CHKERRQ(ISGetSize(iscol,&Ncols)); /* global number of columns, size of iscol_local */
277ca3fa75bSLois Curfman McInnes 
278ca3fa75bSLois Curfman McInnes   /* No parallel redistribution currently supported! Should really check each index set
2797eba5e9cSLois Curfman McInnes      to comfirm that it is OK.  ... Currently supports only submatrix same partitioning as
2807eba5e9cSLois Curfman McInnes      original matrix! */
281ca3fa75bSLois Curfman McInnes 
2825f80ce2aSJacob Faibussowitsch   CHKERRQ(MatGetLocalSize(A,&nlrows,&nlcols));
2835f80ce2aSJacob Faibussowitsch   CHKERRQ(MatGetOwnershipRange(A,&rstart,&rend));
284ca3fa75bSLois Curfman McInnes 
285ca3fa75bSLois Curfman McInnes   /* Check submatrix call */
286ca3fa75bSLois Curfman McInnes   if (scall == MAT_REUSE_MATRIX) {
287e32f2f54SBarry Smith     /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */
2887eba5e9cSLois Curfman McInnes     /* Really need to test rows and column sizes! */
289ca3fa75bSLois Curfman McInnes     newmat = *B;
290ca3fa75bSLois Curfman McInnes   } else {
291ca3fa75bSLois Curfman McInnes     /* Create and fill new matrix */
2925f80ce2aSJacob Faibussowitsch     CHKERRQ(MatCreate(PetscObjectComm((PetscObject)A),&newmat));
2935f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetSizes(newmat,nrows,ncols,PETSC_DECIDE,Ncols));
2945f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetType(newmat,((PetscObject)A)->type_name));
2955f80ce2aSJacob Faibussowitsch     CHKERRQ(MatMPIDenseSetPreallocation(newmat,NULL));
296ca3fa75bSLois Curfman McInnes   }
297ca3fa75bSLois Curfman McInnes 
298ca3fa75bSLois Curfman McInnes   /* Now extract the data pointers and do the copy, column at a time */
299ca3fa75bSLois Curfman McInnes   newmatd = (Mat_MPIDense*)newmat->data;
3005f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArray(newmatd->A,&bv));
3015f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayRead(mat->A,&v));
3025f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(mat->A,&lda));
3034aa3045dSJed Brown   for (i=0; i<Ncols; i++) {
304637a0070SStefano Zampini     const PetscScalar *av = v + lda*icol[i];
305ca3fa75bSLois Curfman McInnes     for (j=0; j<nrows; j++) {
3067eba5e9cSLois Curfman McInnes       *bv++ = av[irow[j] - rstart];
307ca3fa75bSLois Curfman McInnes     }
308ca3fa75bSLois Curfman McInnes   }
3095f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayRead(mat->A,&v));
3105f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArray(newmatd->A,&bv));
311ca3fa75bSLois Curfman McInnes 
312ca3fa75bSLois Curfman McInnes   /* Assemble the matrices so that the correct flags are set */
3135f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyBegin(newmat,MAT_FINAL_ASSEMBLY));
3145f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyEnd(newmat,MAT_FINAL_ASSEMBLY));
315ca3fa75bSLois Curfman McInnes 
316ca3fa75bSLois Curfman McInnes   /* Free work space */
3175f80ce2aSJacob Faibussowitsch   CHKERRQ(ISRestoreIndices(isrow,&irow));
3185f80ce2aSJacob Faibussowitsch   CHKERRQ(ISRestoreIndices(iscol_local,&icol));
3195f80ce2aSJacob Faibussowitsch   CHKERRQ(ISDestroy(&iscol_local));
320ca3fa75bSLois Curfman McInnes   *B   = newmat;
321ca3fa75bSLois Curfman McInnes   PetscFunctionReturn(0);
322ca3fa75bSLois Curfman McInnes }
323ca3fa75bSLois Curfman McInnes 
324637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A,PetscScalar **array)
325ff14e315SSatish Balay {
32673a71a0fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
32773a71a0fSBarry Smith 
3283a40ed3dSBarry Smith   PetscFunctionBegin;
3295f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArray(a->A,array));
3303a40ed3dSBarry Smith   PetscFunctionReturn(0);
331ff14e315SSatish Balay }
332ff14e315SSatish Balay 
333637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A,const PetscScalar **array)
3348572280aSBarry Smith {
3358572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3368572280aSBarry Smith 
3378572280aSBarry Smith   PetscFunctionBegin;
3385f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayRead(a->A,array));
3398572280aSBarry Smith   PetscFunctionReturn(0);
3408572280aSBarry Smith }
3418572280aSBarry Smith 
3426947451fSStefano Zampini PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A,PetscScalar **array)
3436947451fSStefano Zampini {
3446947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3456947451fSStefano Zampini 
3466947451fSStefano Zampini   PetscFunctionBegin;
3475f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayWrite(a->A,array));
3486947451fSStefano Zampini   PetscFunctionReturn(0);
3496947451fSStefano Zampini }
3506947451fSStefano Zampini 
351dfbe8321SBarry Smith PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat,MatAssemblyType mode)
3528965ea79SLois Curfman McInnes {
35339ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
35413f74950SBarry Smith   PetscInt       nstash,reallocs;
3558965ea79SLois Curfman McInnes 
3563a40ed3dSBarry Smith   PetscFunctionBegin;
3574067683fSStefano Zampini   if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(0);
3588965ea79SLois Curfman McInnes 
3595f80ce2aSJacob Faibussowitsch   CHKERRQ(MatStashScatterBegin_Private(mat,&mat->stash,mat->rmap->range));
3605f80ce2aSJacob Faibussowitsch   CHKERRQ(MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs));
3615f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscInfo(mdn->A,"Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n",nstash,reallocs));
3623a40ed3dSBarry Smith   PetscFunctionReturn(0);
3638965ea79SLois Curfman McInnes }
3648965ea79SLois Curfman McInnes 
365dfbe8321SBarry Smith PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat,MatAssemblyType mode)
3668965ea79SLois Curfman McInnes {
36739ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn=(Mat_MPIDense*)mat->data;
36813f74950SBarry Smith   PetscInt       i,*row,*col,flg,j,rstart,ncols;
36913f74950SBarry Smith   PetscMPIInt    n;
37087828ca2SBarry Smith   PetscScalar    *val;
3718965ea79SLois Curfman McInnes 
3723a40ed3dSBarry Smith   PetscFunctionBegin;
373910cf402Sprj-   if (!mdn->donotstash && !mat->nooffprocentries) {
3748965ea79SLois Curfman McInnes     /*  wait on receives */
3757ef1d9bdSSatish Balay     while (1) {
3765f80ce2aSJacob Faibussowitsch       CHKERRQ(MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg));
3777ef1d9bdSSatish Balay       if (!flg) break;
3788965ea79SLois Curfman McInnes 
3797ef1d9bdSSatish Balay       for (i=0; i<n;) {
3807ef1d9bdSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
3812205254eSKarl Rupp         for (j=i,rstart=row[j]; j<n; j++) {
3822205254eSKarl Rupp           if (row[j] != rstart) break;
3832205254eSKarl Rupp         }
3847ef1d9bdSSatish Balay         if (j < n) ncols = j-i;
3857ef1d9bdSSatish Balay         else       ncols = n-i;
3867ef1d9bdSSatish Balay         /* Now assemble all these values with a single function call */
3875f80ce2aSJacob Faibussowitsch         CHKERRQ(MatSetValues_MPIDense(mat,1,row+i,ncols,col+i,val+i,mat->insertmode));
3887ef1d9bdSSatish Balay         i    = j;
3898965ea79SLois Curfman McInnes       }
3907ef1d9bdSSatish Balay     }
3915f80ce2aSJacob Faibussowitsch     CHKERRQ(MatStashScatterEnd_Private(&mat->stash));
392910cf402Sprj-   }
3938965ea79SLois Curfman McInnes 
3945f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyBegin(mdn->A,mode));
3955f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyEnd(mdn->A,mode));
3968965ea79SLois Curfman McInnes 
3976d4a8577SBarry Smith   if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) {
3985f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetUpMultiply_MPIDense(mat));
3998965ea79SLois Curfman McInnes   }
4003a40ed3dSBarry Smith   PetscFunctionReturn(0);
4018965ea79SLois Curfman McInnes }
4028965ea79SLois Curfman McInnes 
403dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_MPIDense(Mat A)
4048965ea79SLois Curfman McInnes {
40539ddd567SLois Curfman McInnes   Mat_MPIDense   *l = (Mat_MPIDense*)A->data;
4063a40ed3dSBarry Smith 
4073a40ed3dSBarry Smith   PetscFunctionBegin;
4085f80ce2aSJacob Faibussowitsch   CHKERRQ(MatZeroEntries(l->A));
4093a40ed3dSBarry Smith   PetscFunctionReturn(0);
4108965ea79SLois Curfman McInnes }
4118965ea79SLois Curfman McInnes 
412637a0070SStefano Zampini PetscErrorCode MatZeroRows_MPIDense(Mat A,PetscInt n,const PetscInt rows[],PetscScalar diag,Vec x,Vec b)
4138965ea79SLois Curfman McInnes {
41439ddd567SLois Curfman McInnes   Mat_MPIDense      *l = (Mat_MPIDense*)A->data;
415637a0070SStefano Zampini   PetscInt          i,len,*lrows;
416637a0070SStefano Zampini 
417637a0070SStefano Zampini   PetscFunctionBegin;
418637a0070SStefano Zampini   /* get locally owned rows */
4195f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLayoutMapLocal(A->rmap,n,rows,&len,&lrows,NULL));
420637a0070SStefano Zampini   /* fix right hand side if needed */
421637a0070SStefano Zampini   if (x && b) {
42297b48c8fSBarry Smith     const PetscScalar *xx;
42397b48c8fSBarry Smith     PetscScalar       *bb;
4248965ea79SLois Curfman McInnes 
4255f80ce2aSJacob Faibussowitsch     CHKERRQ(VecGetArrayRead(x, &xx));
4265f80ce2aSJacob Faibussowitsch     CHKERRQ(VecGetArrayWrite(b, &bb));
427637a0070SStefano Zampini     for (i=0;i<len;++i) bb[lrows[i]] = diag*xx[lrows[i]];
4285f80ce2aSJacob Faibussowitsch     CHKERRQ(VecRestoreArrayRead(x, &xx));
4295f80ce2aSJacob Faibussowitsch     CHKERRQ(VecRestoreArrayWrite(b, &bb));
43097b48c8fSBarry Smith   }
4315f80ce2aSJacob Faibussowitsch   CHKERRQ(MatZeroRows(l->A,len,lrows,0.0,NULL,NULL));
432e2eb51b1SBarry Smith   if (diag != 0.0) {
433637a0070SStefano Zampini     Vec d;
434b9679d65SBarry Smith 
4355f80ce2aSJacob Faibussowitsch     CHKERRQ(MatCreateVecs(A,NULL,&d));
4365f80ce2aSJacob Faibussowitsch     CHKERRQ(VecSet(d,diag));
4375f80ce2aSJacob Faibussowitsch     CHKERRQ(MatDiagonalSet(A,d,INSERT_VALUES));
4385f80ce2aSJacob Faibussowitsch     CHKERRQ(VecDestroy(&d));
439b9679d65SBarry Smith   }
4405f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscFree(lrows));
4413a40ed3dSBarry Smith   PetscFunctionReturn(0);
4428965ea79SLois Curfman McInnes }
4438965ea79SLois Curfman McInnes 
444cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat,Vec,Vec);
445cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat,Vec,Vec,Vec);
446cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat,Vec,Vec);
447cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat,Vec,Vec,Vec);
448cc2e6a90SBarry Smith 
449dfbe8321SBarry Smith PetscErrorCode MatMult_MPIDense(Mat mat,Vec xx,Vec yy)
4508965ea79SLois Curfman McInnes {
45139ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
452637a0070SStefano Zampini   const PetscScalar *ax;
453637a0070SStefano Zampini   PetscScalar       *ay;
454d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
455c456f294SBarry Smith 
4563a40ed3dSBarry Smith   PetscFunctionBegin;
4575f80ce2aSJacob Faibussowitsch   CHKERRQ(VecGetArrayReadAndMemType(xx,&ax,&axmtype));
4585f80ce2aSJacob Faibussowitsch   CHKERRQ(VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype));
4595f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE));
4605f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE));
4615f80ce2aSJacob Faibussowitsch   CHKERRQ(VecRestoreArrayAndMemType(mdn->lvec,&ay));
4625f80ce2aSJacob Faibussowitsch   CHKERRQ(VecRestoreArrayReadAndMemType(xx,&ax));
4635f80ce2aSJacob Faibussowitsch   CHKERRQ((*mdn->A->ops->mult)(mdn->A,mdn->lvec,yy));
4643a40ed3dSBarry Smith   PetscFunctionReturn(0);
4658965ea79SLois Curfman McInnes }
4668965ea79SLois Curfman McInnes 
467dfbe8321SBarry Smith PetscErrorCode MatMultAdd_MPIDense(Mat mat,Vec xx,Vec yy,Vec zz)
4688965ea79SLois Curfman McInnes {
46939ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
470637a0070SStefano Zampini   const PetscScalar *ax;
471637a0070SStefano Zampini   PetscScalar       *ay;
472d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
473c456f294SBarry Smith 
4743a40ed3dSBarry Smith   PetscFunctionBegin;
4755f80ce2aSJacob Faibussowitsch   CHKERRQ(VecGetArrayReadAndMemType(xx,&ax,&axmtype));
4765f80ce2aSJacob Faibussowitsch   CHKERRQ(VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype));
4775f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE));
4785f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE));
4795f80ce2aSJacob Faibussowitsch   CHKERRQ(VecRestoreArrayAndMemType(mdn->lvec,&ay));
4805f80ce2aSJacob Faibussowitsch   CHKERRQ(VecRestoreArrayReadAndMemType(xx,&ax));
4815f80ce2aSJacob Faibussowitsch   CHKERRQ((*mdn->A->ops->multadd)(mdn->A,mdn->lvec,yy,zz));
4823a40ed3dSBarry Smith   PetscFunctionReturn(0);
4838965ea79SLois Curfman McInnes }
4848965ea79SLois Curfman McInnes 
485dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_MPIDense(Mat A,Vec xx,Vec yy)
486096963f5SLois Curfman McInnes {
487096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
488637a0070SStefano Zampini   const PetscScalar *ax;
489637a0070SStefano Zampini   PetscScalar       *ay;
490d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
491096963f5SLois Curfman McInnes 
4923a40ed3dSBarry Smith   PetscFunctionBegin;
4935f80ce2aSJacob Faibussowitsch   CHKERRQ(VecSet(yy,0.0));
4945f80ce2aSJacob Faibussowitsch   CHKERRQ((*a->A->ops->multtranspose)(a->A,xx,a->lvec));
4955f80ce2aSJacob Faibussowitsch   CHKERRQ(VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype));
4965f80ce2aSJacob Faibussowitsch   CHKERRQ(VecGetArrayAndMemType(yy,&ay,&aymtype));
4975f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM));
4985f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM));
4995f80ce2aSJacob Faibussowitsch   CHKERRQ(VecRestoreArrayReadAndMemType(a->lvec,&ax));
5005f80ce2aSJacob Faibussowitsch   CHKERRQ(VecRestoreArrayAndMemType(yy,&ay));
5013a40ed3dSBarry Smith   PetscFunctionReturn(0);
502096963f5SLois Curfman McInnes }
503096963f5SLois Curfman McInnes 
504dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A,Vec xx,Vec yy,Vec zz)
505096963f5SLois Curfman McInnes {
506096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
507637a0070SStefano Zampini   const PetscScalar *ax;
508637a0070SStefano Zampini   PetscScalar       *ay;
509d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
510096963f5SLois Curfman McInnes 
5113a40ed3dSBarry Smith   PetscFunctionBegin;
5125f80ce2aSJacob Faibussowitsch   CHKERRQ(VecCopy(yy,zz));
5135f80ce2aSJacob Faibussowitsch   CHKERRQ((*a->A->ops->multtranspose)(a->A,xx,a->lvec));
5145f80ce2aSJacob Faibussowitsch   CHKERRQ(VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype));
5155f80ce2aSJacob Faibussowitsch   CHKERRQ(VecGetArrayAndMemType(zz,&ay,&aymtype));
5165f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM));
5175f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM));
5185f80ce2aSJacob Faibussowitsch   CHKERRQ(VecRestoreArrayReadAndMemType(a->lvec,&ax));
5195f80ce2aSJacob Faibussowitsch   CHKERRQ(VecRestoreArrayAndMemType(zz,&ay));
5203a40ed3dSBarry Smith   PetscFunctionReturn(0);
521096963f5SLois Curfman McInnes }
522096963f5SLois Curfman McInnes 
523dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_MPIDense(Mat A,Vec v)
5248965ea79SLois Curfman McInnes {
52539ddd567SLois Curfman McInnes   Mat_MPIDense      *a    = (Mat_MPIDense*)A->data;
526637a0070SStefano Zampini   PetscInt          lda,len,i,n,m = A->rmap->n,radd;
52787828ca2SBarry Smith   PetscScalar       *x,zero = 0.0;
528637a0070SStefano Zampini   const PetscScalar *av;
529ed3cc1f0SBarry Smith 
5303a40ed3dSBarry Smith   PetscFunctionBegin;
5315f80ce2aSJacob Faibussowitsch   CHKERRQ(VecSet(v,zero));
5325f80ce2aSJacob Faibussowitsch   CHKERRQ(VecGetArray(v,&x));
5335f80ce2aSJacob Faibussowitsch   CHKERRQ(VecGetSize(v,&n));
5342c71b3e2SJacob Faibussowitsch   PetscCheckFalse(n != A->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Nonconforming mat and vec");
535d0f46423SBarry Smith   len  = PetscMin(a->A->rmap->n,a->A->cmap->n);
536d0f46423SBarry Smith   radd = A->rmap->rstart*m;
5375f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayRead(a->A,&av));
5385f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(a->A,&lda));
53944cd7ae7SLois Curfman McInnes   for (i=0; i<len; i++) {
540637a0070SStefano Zampini     x[i] = av[radd + i*lda + i];
541096963f5SLois Curfman McInnes   }
5425f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayRead(a->A,&av));
5435f80ce2aSJacob Faibussowitsch   CHKERRQ(VecRestoreArray(v,&x));
5443a40ed3dSBarry Smith   PetscFunctionReturn(0);
5458965ea79SLois Curfman McInnes }
5468965ea79SLois Curfman McInnes 
547dfbe8321SBarry Smith PetscErrorCode MatDestroy_MPIDense(Mat mat)
5488965ea79SLois Curfman McInnes {
5493501a2bdSLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
550ed3cc1f0SBarry Smith 
5513a40ed3dSBarry Smith   PetscFunctionBegin;
552aa482453SBarry Smith #if defined(PETSC_USE_LOG)
553c0aa6a63SJacob Faibussowitsch   PetscLogObjectState((PetscObject)mat,"Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT,mat->rmap->N,mat->cmap->N);
5548965ea79SLois Curfman McInnes #endif
5555f80ce2aSJacob Faibussowitsch   CHKERRQ(MatStashDestroy_Private(&mat->stash));
556*28b400f6SJacob Faibussowitsch   PetscCheck(!mdn->vecinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
557*28b400f6SJacob Faibussowitsch   PetscCheck(!mdn->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
5585f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDestroy(&mdn->A));
5595f80ce2aSJacob Faibussowitsch   CHKERRQ(VecDestroy(&mdn->lvec));
5605f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscSFDestroy(&mdn->Mvctx));
5615f80ce2aSJacob Faibussowitsch   CHKERRQ(VecDestroy(&mdn->cvec));
5625f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDestroy(&mdn->cmat));
56301b82886SBarry Smith 
5645f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscFree(mat->data));
5655f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectChangeTypeName((PetscObject)mat,NULL));
5668baccfbdSHong Zhang 
5675f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",NULL));
5685f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",NULL));
5695f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",NULL));
5705f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",NULL));
5715f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",NULL));
5725f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",NULL));
5735f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",NULL));
5745f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",NULL));
5755f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",NULL));
5765f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",NULL));
5775f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",NULL));
5785f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpiaij_mpidense_C",NULL));
5795f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpiaij_C",NULL));
5808baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
5815f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",NULL));
5828baccfbdSHong Zhang #endif
583d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
5845f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",NULL));
585d24d4204SJose E. Roman #endif
5865f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",NULL));
5875f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",NULL));
5885f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",NULL));
5896718818eSStefano Zampini #if defined (PETSC_HAVE_CUDA)
5905f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",NULL));
5915f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",NULL));
5926718818eSStefano Zampini #endif
5935f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",NULL));
5945f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",NULL));
5955f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",NULL));
5965f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",NULL));
5975f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",NULL));
5985f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",NULL));
5995f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",NULL));
6005f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",NULL));
6015f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",NULL));
6025f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",NULL));
6033a40ed3dSBarry Smith   PetscFunctionReturn(0);
6048965ea79SLois Curfman McInnes }
60539ddd567SLois Curfman McInnes 
60652c5f739Sprj- PETSC_INTERN PetscErrorCode MatView_SeqDense(Mat,PetscViewer);
60752c5f739Sprj- 
6089804daf3SBarry Smith #include <petscdraw.h>
6096849ba73SBarry Smith static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
6108965ea79SLois Curfman McInnes {
61139ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
612616b8fbbSStefano Zampini   PetscMPIInt       rank;
61319fd82e9SBarry Smith   PetscViewerType   vtype;
614ace3abfcSBarry Smith   PetscBool         iascii,isdraw;
615b0a32e0cSBarry Smith   PetscViewer       sviewer;
616f3ef73ceSBarry Smith   PetscViewerFormat format;
6178965ea79SLois Curfman McInnes 
6183a40ed3dSBarry Smith   PetscFunctionBegin;
6195f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat),&rank));
6205f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii));
6215f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw));
62232077d6dSBarry Smith   if (iascii) {
6235f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscViewerGetType(viewer,&vtype));
6245f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscViewerGetFormat(viewer,&format));
625456192e2SBarry Smith     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
6264e220ebcSLois Curfman McInnes       MatInfo info;
6275f80ce2aSJacob Faibussowitsch       CHKERRQ(MatGetInfo(mat,MAT_LOCAL,&info));
6285f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscViewerASCIIPushSynchronized(viewer));
6295f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscViewerASCIISynchronizedPrintf(viewer,"  [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n",rank,mat->rmap->n,(PetscInt)info.nz_used,(PetscInt)info.nz_allocated,(PetscInt)info.memory));
6305f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscViewerFlush(viewer));
6315f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscViewerASCIIPopSynchronized(viewer));
6325f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscSFView(mdn->Mvctx,viewer));
6333a40ed3dSBarry Smith       PetscFunctionReturn(0);
634fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
6353a40ed3dSBarry Smith       PetscFunctionReturn(0);
6368965ea79SLois Curfman McInnes     }
637f1af5d2fSBarry Smith   } else if (isdraw) {
638b0a32e0cSBarry Smith     PetscDraw draw;
639ace3abfcSBarry Smith     PetscBool isnull;
640f1af5d2fSBarry Smith 
6415f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscViewerDrawGetDraw(viewer,0,&draw));
6425f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscDrawIsNull(draw,&isnull));
643f1af5d2fSBarry Smith     if (isnull) PetscFunctionReturn(0);
644f1af5d2fSBarry Smith   }
64577ed5343SBarry Smith 
6467da1fb6eSBarry Smith   {
6478965ea79SLois Curfman McInnes     /* assemble the entire matrix onto first processor. */
6488965ea79SLois Curfman McInnes     Mat         A;
649d0f46423SBarry Smith     PetscInt    M = mat->rmap->N,N = mat->cmap->N,m,row,i,nz;
650ba8c8a56SBarry Smith     PetscInt    *cols;
651ba8c8a56SBarry Smith     PetscScalar *vals;
6528965ea79SLois Curfman McInnes 
6535f80ce2aSJacob Faibussowitsch     CHKERRQ(MatCreate(PetscObjectComm((PetscObject)mat),&A));
654dd400576SPatrick Sanan     if (rank == 0) {
6555f80ce2aSJacob Faibussowitsch       CHKERRQ(MatSetSizes(A,M,N,M,N));
6563a40ed3dSBarry Smith     } else {
6575f80ce2aSJacob Faibussowitsch       CHKERRQ(MatSetSizes(A,0,0,M,N));
6588965ea79SLois Curfman McInnes     }
6597adad957SLisandro Dalcin     /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */
6605f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetType(A,MATMPIDENSE));
6615f80ce2aSJacob Faibussowitsch     CHKERRQ(MatMPIDenseSetPreallocation(A,NULL));
6625f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogObjectParent((PetscObject)mat,(PetscObject)A));
6638965ea79SLois Curfman McInnes 
66439ddd567SLois Curfman McInnes     /* Copy the matrix ... This isn't the most efficient means,
66539ddd567SLois Curfman McInnes        but it's quick for now */
66651022da4SBarry Smith     A->insertmode = INSERT_VALUES;
6672205254eSKarl Rupp 
6682205254eSKarl Rupp     row = mat->rmap->rstart;
6692205254eSKarl Rupp     m   = mdn->A->rmap->n;
6708965ea79SLois Curfman McInnes     for (i=0; i<m; i++) {
6715f80ce2aSJacob Faibussowitsch       CHKERRQ(MatGetRow_MPIDense(mat,row,&nz,&cols,&vals));
6725f80ce2aSJacob Faibussowitsch       CHKERRQ(MatSetValues_MPIDense(A,1,&row,nz,cols,vals,INSERT_VALUES));
6735f80ce2aSJacob Faibussowitsch       CHKERRQ(MatRestoreRow_MPIDense(mat,row,&nz,&cols,&vals));
67439ddd567SLois Curfman McInnes       row++;
6758965ea79SLois Curfman McInnes     }
6768965ea79SLois Curfman McInnes 
6775f80ce2aSJacob Faibussowitsch     CHKERRQ(MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY));
6785f80ce2aSJacob Faibussowitsch     CHKERRQ(MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY));
6795f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscViewerGetSubViewer(viewer,PETSC_COMM_SELF,&sviewer));
680dd400576SPatrick Sanan     if (rank == 0) {
6815f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscObjectSetName((PetscObject)((Mat_MPIDense*)(A->data))->A,((PetscObject)mat)->name));
6825f80ce2aSJacob Faibussowitsch       CHKERRQ(MatView_SeqDense(((Mat_MPIDense*)(A->data))->A,sviewer));
6838965ea79SLois Curfman McInnes     }
6845f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscViewerRestoreSubViewer(viewer,PETSC_COMM_SELF,&sviewer));
6855f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscViewerFlush(viewer));
6865f80ce2aSJacob Faibussowitsch     CHKERRQ(MatDestroy(&A));
6878965ea79SLois Curfman McInnes   }
6883a40ed3dSBarry Smith   PetscFunctionReturn(0);
6898965ea79SLois Curfman McInnes }
6908965ea79SLois Curfman McInnes 
691dfbe8321SBarry Smith PetscErrorCode MatView_MPIDense(Mat mat,PetscViewer viewer)
6928965ea79SLois Curfman McInnes {
693ace3abfcSBarry Smith   PetscBool      iascii,isbinary,isdraw,issocket;
6948965ea79SLois Curfman McInnes 
695433994e6SBarry Smith   PetscFunctionBegin;
6965f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii));
6975f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary));
6985f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERSOCKET,&issocket));
6995f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw));
7000f5bd95cSBarry Smith 
70132077d6dSBarry Smith   if (iascii || issocket || isdraw) {
7025f80ce2aSJacob Faibussowitsch     CHKERRQ(MatView_MPIDense_ASCIIorDraworSocket(mat,viewer));
7030f5bd95cSBarry Smith   } else if (isbinary) {
7045f80ce2aSJacob Faibussowitsch     CHKERRQ(MatView_Dense_Binary(mat,viewer));
70511aeaf0aSBarry Smith   }
7063a40ed3dSBarry Smith   PetscFunctionReturn(0);
7078965ea79SLois Curfman McInnes }
7088965ea79SLois Curfman McInnes 
709dfbe8321SBarry Smith PetscErrorCode MatGetInfo_MPIDense(Mat A,MatInfoType flag,MatInfo *info)
7108965ea79SLois Curfman McInnes {
7113501a2bdSLois Curfman McInnes   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
7123501a2bdSLois Curfman McInnes   Mat            mdn  = mat->A;
7133966268fSBarry Smith   PetscLogDouble isend[5],irecv[5];
7148965ea79SLois Curfman McInnes 
7153a40ed3dSBarry Smith   PetscFunctionBegin;
7164e220ebcSLois Curfman McInnes   info->block_size = 1.0;
7172205254eSKarl Rupp 
7185f80ce2aSJacob Faibussowitsch   CHKERRQ(MatGetInfo(mdn,MAT_LOCAL,info));
7192205254eSKarl Rupp 
7204e220ebcSLois Curfman McInnes   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
7214e220ebcSLois Curfman McInnes   isend[3] = info->memory;  isend[4] = info->mallocs;
7228965ea79SLois Curfman McInnes   if (flag == MAT_LOCAL) {
7234e220ebcSLois Curfman McInnes     info->nz_used      = isend[0];
7244e220ebcSLois Curfman McInnes     info->nz_allocated = isend[1];
7254e220ebcSLois Curfman McInnes     info->nz_unneeded  = isend[2];
7264e220ebcSLois Curfman McInnes     info->memory       = isend[3];
7274e220ebcSLois Curfman McInnes     info->mallocs      = isend[4];
7288965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_MAX) {
7295f80ce2aSJacob Faibussowitsch     CHKERRMPI(MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_MAX,PetscObjectComm((PetscObject)A)));
7302205254eSKarl Rupp 
7314e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7324e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7334e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7344e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7354e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7368965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_SUM) {
7375f80ce2aSJacob Faibussowitsch     CHKERRMPI(MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_SUM,PetscObjectComm((PetscObject)A)));
7382205254eSKarl Rupp 
7394e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7404e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7414e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7424e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7434e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7448965ea79SLois Curfman McInnes   }
7454e220ebcSLois Curfman McInnes   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
7464e220ebcSLois Curfman McInnes   info->fill_ratio_needed = 0;
7474e220ebcSLois Curfman McInnes   info->factor_mallocs    = 0;
7483a40ed3dSBarry Smith   PetscFunctionReturn(0);
7498965ea79SLois Curfman McInnes }
7508965ea79SLois Curfman McInnes 
751ace3abfcSBarry Smith PetscErrorCode MatSetOption_MPIDense(Mat A,MatOption op,PetscBool flg)
7528965ea79SLois Curfman McInnes {
75339ddd567SLois Curfman McInnes   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
7548965ea79SLois Curfman McInnes 
7553a40ed3dSBarry Smith   PetscFunctionBegin;
75612c028f9SKris Buschelman   switch (op) {
757512a5fc5SBarry Smith   case MAT_NEW_NONZERO_LOCATIONS:
75812c028f9SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
75912c028f9SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
76043674050SBarry Smith     MatCheckPreallocated(A,1);
7615f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetOption(a->A,op,flg));
76212c028f9SKris Buschelman     break;
76312c028f9SKris Buschelman   case MAT_ROW_ORIENTED:
76443674050SBarry Smith     MatCheckPreallocated(A,1);
7654e0d8c25SBarry Smith     a->roworiented = flg;
7665f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetOption(a->A,op,flg));
76712c028f9SKris Buschelman     break;
7688c78258cSHong Zhang   case MAT_FORCE_DIAGONAL_ENTRIES:
76913fa8e87SLisandro Dalcin   case MAT_KEEP_NONZERO_PATTERN:
77012c028f9SKris Buschelman   case MAT_USE_HASH_TABLE:
771071fcb05SBarry Smith   case MAT_SORTED_FULL:
7725f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscInfo(A,"Option %s ignored\n",MatOptions[op]));
77312c028f9SKris Buschelman     break;
77412c028f9SKris Buschelman   case MAT_IGNORE_OFF_PROC_ENTRIES:
7754e0d8c25SBarry Smith     a->donotstash = flg;
77612c028f9SKris Buschelman     break;
77777e54ba9SKris Buschelman   case MAT_SYMMETRIC:
77877e54ba9SKris Buschelman   case MAT_STRUCTURALLY_SYMMETRIC:
7799a4540c5SBarry Smith   case MAT_HERMITIAN:
7809a4540c5SBarry Smith   case MAT_SYMMETRY_ETERNAL:
781600fe468SBarry Smith   case MAT_IGNORE_LOWER_TRIANGULAR:
7825d7aebe8SStefano Zampini   case MAT_IGNORE_ZERO_ENTRIES:
7835f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscInfo(A,"Option %s ignored\n",MatOptions[op]));
78477e54ba9SKris Buschelman     break;
78512c028f9SKris Buschelman   default:
78698921bdaSJacob Faibussowitsch     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"unknown option %s",MatOptions[op]);
7873a40ed3dSBarry Smith   }
7883a40ed3dSBarry Smith   PetscFunctionReturn(0);
7898965ea79SLois Curfman McInnes }
7908965ea79SLois Curfman McInnes 
791dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_MPIDense(Mat A,Vec ll,Vec rr)
7925b2fa520SLois Curfman McInnes {
7935b2fa520SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
794637a0070SStefano Zampini   const PetscScalar *l;
795637a0070SStefano Zampini   PetscScalar       x,*v,*vv,*r;
796637a0070SStefano Zampini   PetscInt          i,j,s2a,s3a,s2,s3,m=mdn->A->rmap->n,n=mdn->A->cmap->n,lda;
7975b2fa520SLois Curfman McInnes 
7985b2fa520SLois Curfman McInnes   PetscFunctionBegin;
7995f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArray(mdn->A,&vv));
8005f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(mdn->A,&lda));
8015f80ce2aSJacob Faibussowitsch   CHKERRQ(MatGetLocalSize(A,&s2,&s3));
8025b2fa520SLois Curfman McInnes   if (ll) {
8035f80ce2aSJacob Faibussowitsch     CHKERRQ(VecGetLocalSize(ll,&s2a));
8042c71b3e2SJacob Faibussowitsch     PetscCheckFalse(s2a != s2,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2);
8055f80ce2aSJacob Faibussowitsch     CHKERRQ(VecGetArrayRead(ll,&l));
8065b2fa520SLois Curfman McInnes     for (i=0; i<m; i++) {
8075b2fa520SLois Curfman McInnes       x = l[i];
808637a0070SStefano Zampini       v = vv + i;
809637a0070SStefano Zampini       for (j=0; j<n; j++) { (*v) *= x; v+= lda;}
8105b2fa520SLois Curfman McInnes     }
8115f80ce2aSJacob Faibussowitsch     CHKERRQ(VecRestoreArrayRead(ll,&l));
8125f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogFlops(1.0*n*m));
8135b2fa520SLois Curfman McInnes   }
8145b2fa520SLois Curfman McInnes   if (rr) {
815637a0070SStefano Zampini     const PetscScalar *ar;
816637a0070SStefano Zampini 
8175f80ce2aSJacob Faibussowitsch     CHKERRQ(VecGetLocalSize(rr,&s3a));
8182c71b3e2SJacob Faibussowitsch     PetscCheckFalse(s3a != s3,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3);
8195f80ce2aSJacob Faibussowitsch     CHKERRQ(VecGetArrayRead(rr,&ar));
8205f80ce2aSJacob Faibussowitsch     CHKERRQ(VecGetArray(mdn->lvec,&r));
8215f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscSFBcastBegin(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE));
8225f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE));
8235f80ce2aSJacob Faibussowitsch     CHKERRQ(VecRestoreArrayRead(rr,&ar));
8245b2fa520SLois Curfman McInnes     for (i=0; i<n; i++) {
8255b2fa520SLois Curfman McInnes       x = r[i];
826637a0070SStefano Zampini       v = vv + i*lda;
8272205254eSKarl Rupp       for (j=0; j<m; j++) (*v++) *= x;
8285b2fa520SLois Curfman McInnes     }
8295f80ce2aSJacob Faibussowitsch     CHKERRQ(VecRestoreArray(mdn->lvec,&r));
8305f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogFlops(1.0*n*m));
8315b2fa520SLois Curfman McInnes   }
8325f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArray(mdn->A,&vv));
8335b2fa520SLois Curfman McInnes   PetscFunctionReturn(0);
8345b2fa520SLois Curfman McInnes }
8355b2fa520SLois Curfman McInnes 
836dfbe8321SBarry Smith PetscErrorCode MatNorm_MPIDense(Mat A,NormType type,PetscReal *nrm)
837096963f5SLois Curfman McInnes {
8383501a2bdSLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
83913f74950SBarry Smith   PetscInt          i,j;
840616b8fbbSStefano Zampini   PetscMPIInt       size;
841329f5518SBarry Smith   PetscReal         sum = 0.0;
842637a0070SStefano Zampini   const PetscScalar *av,*v;
8433501a2bdSLois Curfman McInnes 
8443a40ed3dSBarry Smith   PetscFunctionBegin;
8455f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayRead(mdn->A,&av));
846637a0070SStefano Zampini   v    = av;
8475f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A),&size));
848616b8fbbSStefano Zampini   if (size == 1) {
8495f80ce2aSJacob Faibussowitsch     CHKERRQ(MatNorm(mdn->A,type,nrm));
8503501a2bdSLois Curfman McInnes   } else {
8513501a2bdSLois Curfman McInnes     if (type == NORM_FROBENIUS) {
852d0f46423SBarry Smith       for (i=0; i<mdn->A->cmap->n*mdn->A->rmap->n; i++) {
853329f5518SBarry Smith         sum += PetscRealPart(PetscConj(*v)*(*v)); v++;
8543501a2bdSLois Curfman McInnes       }
8555f80ce2aSJacob Faibussowitsch       CHKERRMPI(MPIU_Allreduce(&sum,nrm,1,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A)));
8568f1a2a5eSBarry Smith       *nrm = PetscSqrtReal(*nrm);
8575f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscLogFlops(2.0*mdn->A->cmap->n*mdn->A->rmap->n));
8583a40ed3dSBarry Smith     } else if (type == NORM_1) {
859329f5518SBarry Smith       PetscReal *tmp,*tmp2;
8605f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscCalloc2(A->cmap->N,&tmp,A->cmap->N,&tmp2));
861064f8208SBarry Smith       *nrm = 0.0;
862637a0070SStefano Zampini       v    = av;
863d0f46423SBarry Smith       for (j=0; j<mdn->A->cmap->n; j++) {
864d0f46423SBarry Smith         for (i=0; i<mdn->A->rmap->n; i++) {
86567e560aaSBarry Smith           tmp[j] += PetscAbsScalar(*v);  v++;
8663501a2bdSLois Curfman McInnes         }
8673501a2bdSLois Curfman McInnes       }
8685f80ce2aSJacob Faibussowitsch       CHKERRMPI(MPIU_Allreduce(tmp,tmp2,A->cmap->N,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A)));
869d0f46423SBarry Smith       for (j=0; j<A->cmap->N; j++) {
870064f8208SBarry Smith         if (tmp2[j] > *nrm) *nrm = tmp2[j];
8713501a2bdSLois Curfman McInnes       }
8725f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscFree2(tmp,tmp2));
8735f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscLogFlops(A->cmap->n*A->rmap->n));
8743a40ed3dSBarry Smith     } else if (type == NORM_INFINITY) { /* max row norm */
875329f5518SBarry Smith       PetscReal ntemp;
8765f80ce2aSJacob Faibussowitsch       CHKERRQ(MatNorm(mdn->A,type,&ntemp));
8775f80ce2aSJacob Faibussowitsch       CHKERRMPI(MPIU_Allreduce(&ntemp,nrm,1,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)A)));
878ce94432eSBarry Smith     } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for two norm");
8793501a2bdSLois Curfman McInnes   }
8805f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayRead(mdn->A,&av));
8813a40ed3dSBarry Smith   PetscFunctionReturn(0);
8823501a2bdSLois Curfman McInnes }
8833501a2bdSLois Curfman McInnes 
884fc4dec0aSBarry Smith PetscErrorCode MatTranspose_MPIDense(Mat A,MatReuse reuse,Mat *matout)
8853501a2bdSLois Curfman McInnes {
8863501a2bdSLois Curfman McInnes   Mat_MPIDense   *a    = (Mat_MPIDense*)A->data;
8873501a2bdSLois Curfman McInnes   Mat            B;
888d0f46423SBarry Smith   PetscInt       M = A->rmap->N,N = A->cmap->N,m,n,*rwork,rstart = A->rmap->rstart;
889637a0070SStefano Zampini   PetscInt       j,i,lda;
89087828ca2SBarry Smith   PetscScalar    *v;
8913501a2bdSLois Curfman McInnes 
8923a40ed3dSBarry Smith   PetscFunctionBegin;
893cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) {
8945f80ce2aSJacob Faibussowitsch     CHKERRQ(MatCreate(PetscObjectComm((PetscObject)A),&B));
8955f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetSizes(B,A->cmap->n,A->rmap->n,N,M));
8965f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetType(B,((PetscObject)A)->type_name));
8975f80ce2aSJacob Faibussowitsch     CHKERRQ(MatMPIDenseSetPreallocation(B,NULL));
898637a0070SStefano Zampini   } else B = *matout;
8993501a2bdSLois Curfman McInnes 
900637a0070SStefano Zampini   m    = a->A->rmap->n; n = a->A->cmap->n;
9015f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayRead(a->A,(const PetscScalar**)&v));
9025f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(a->A,&lda));
9035f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscMalloc1(m,&rwork));
9043501a2bdSLois Curfman McInnes   for (i=0; i<m; i++) rwork[i] = rstart + i;
9051acff37aSSatish Balay   for (j=0; j<n; j++) {
9065f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetValues(B,1,&j,m,rwork,v,INSERT_VALUES));
907637a0070SStefano Zampini     v   += lda;
9083501a2bdSLois Curfman McInnes   }
9095f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayRead(a->A,(const PetscScalar**)&v));
9105f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscFree(rwork));
9115f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY));
9125f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY));
913cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) {
9143501a2bdSLois Curfman McInnes     *matout = B;
9153501a2bdSLois Curfman McInnes   } else {
9165f80ce2aSJacob Faibussowitsch     CHKERRQ(MatHeaderMerge(A,&B));
9173501a2bdSLois Curfman McInnes   }
9183a40ed3dSBarry Smith   PetscFunctionReturn(0);
919096963f5SLois Curfman McInnes }
920096963f5SLois Curfman McInnes 
9216849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat,MatDuplicateOption,Mat*);
92252c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat,PetscScalar);
9238965ea79SLois Curfman McInnes 
9244994cf47SJed Brown PetscErrorCode MatSetUp_MPIDense(Mat A)
925273d9f13SBarry Smith {
926273d9f13SBarry Smith   PetscFunctionBegin;
9275f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLayoutSetUp(A->rmap));
9285f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLayoutSetUp(A->cmap));
92918992e5dSStefano Zampini   if (!A->preallocated) {
9305f80ce2aSJacob Faibussowitsch     CHKERRQ(MatMPIDenseSetPreallocation(A,NULL));
93118992e5dSStefano Zampini   }
932273d9f13SBarry Smith   PetscFunctionReturn(0);
933273d9f13SBarry Smith }
934273d9f13SBarry Smith 
935488007eeSBarry Smith PetscErrorCode MatAXPY_MPIDense(Mat Y,PetscScalar alpha,Mat X,MatStructure str)
936488007eeSBarry Smith {
937488007eeSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)Y->data, *B = (Mat_MPIDense*)X->data;
938488007eeSBarry Smith 
939488007eeSBarry Smith   PetscFunctionBegin;
9405f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAXPY(A->A,alpha,B->A,str));
941488007eeSBarry Smith   PetscFunctionReturn(0);
942488007eeSBarry Smith }
943488007eeSBarry Smith 
9447087cfbeSBarry Smith PetscErrorCode MatConjugate_MPIDense(Mat mat)
945ba337c44SJed Brown {
946ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
947ba337c44SJed Brown 
948ba337c44SJed Brown   PetscFunctionBegin;
9495f80ce2aSJacob Faibussowitsch   CHKERRQ(MatConjugate(a->A));
950ba337c44SJed Brown   PetscFunctionReturn(0);
951ba337c44SJed Brown }
952ba337c44SJed Brown 
953ba337c44SJed Brown PetscErrorCode MatRealPart_MPIDense(Mat A)
954ba337c44SJed Brown {
955ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
956ba337c44SJed Brown 
957ba337c44SJed Brown   PetscFunctionBegin;
9585f80ce2aSJacob Faibussowitsch   CHKERRQ(MatRealPart(a->A));
959ba337c44SJed Brown   PetscFunctionReturn(0);
960ba337c44SJed Brown }
961ba337c44SJed Brown 
962ba337c44SJed Brown PetscErrorCode MatImaginaryPart_MPIDense(Mat A)
963ba337c44SJed Brown {
964ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
965ba337c44SJed Brown 
966ba337c44SJed Brown   PetscFunctionBegin;
9675f80ce2aSJacob Faibussowitsch   CHKERRQ(MatImaginaryPart(a->A));
968ba337c44SJed Brown   PetscFunctionReturn(0);
969ba337c44SJed Brown }
970ba337c44SJed Brown 
97149a6ff4bSBarry Smith static PetscErrorCode MatGetColumnVector_MPIDense(Mat A,Vec v,PetscInt col)
97249a6ff4bSBarry Smith {
973637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
97449a6ff4bSBarry Smith 
97549a6ff4bSBarry Smith   PetscFunctionBegin;
976*28b400f6SJacob Faibussowitsch   PetscCheck(a->A,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing local matrix");
977*28b400f6SJacob Faibussowitsch   PetscCheck(a->A->ops->getcolumnvector,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing get column operation");
9785f80ce2aSJacob Faibussowitsch   CHKERRQ((*a->A->ops->getcolumnvector)(a->A,v,col));
97949a6ff4bSBarry Smith   PetscFunctionReturn(0);
98049a6ff4bSBarry Smith }
98149a6ff4bSBarry Smith 
982857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat,PetscInt,PetscReal*);
98352c5f739Sprj- 
984857cbf51SRichard Tran Mills PetscErrorCode MatGetColumnReductions_MPIDense(Mat A,PetscInt type,PetscReal *reductions)
9850716a85fSBarry Smith {
986a873a8cdSSam Reynolds   PetscInt       i,m,n;
9870716a85fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
9880716a85fSBarry Smith   PetscReal      *work;
9890716a85fSBarry Smith 
9900716a85fSBarry Smith   PetscFunctionBegin;
9915f80ce2aSJacob Faibussowitsch   CHKERRQ(MatGetSize(A,&m,&n));
9925f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscMalloc1(n,&work));
993857cbf51SRichard Tran Mills   if (type == REDUCTION_MEAN_REALPART) {
9945f80ce2aSJacob Faibussowitsch     CHKERRQ(MatGetColumnReductions_SeqDense(a->A,(PetscInt)REDUCTION_SUM_REALPART,work));
995857cbf51SRichard Tran Mills   } else if (type == REDUCTION_MEAN_IMAGINARYPART) {
9965f80ce2aSJacob Faibussowitsch     CHKERRQ(MatGetColumnReductions_SeqDense(a->A,(PetscInt)REDUCTION_SUM_IMAGINARYPART,work));
997a873a8cdSSam Reynolds   } else {
9985f80ce2aSJacob Faibussowitsch     CHKERRQ(MatGetColumnReductions_SeqDense(a->A,type,work));
999a873a8cdSSam Reynolds   }
1000857cbf51SRichard Tran Mills   if (type == NORM_2) {
10010716a85fSBarry Smith     for (i=0; i<n; i++) work[i] *= work[i];
10020716a85fSBarry Smith   }
1003857cbf51SRichard Tran Mills   if (type == NORM_INFINITY) {
10045f80ce2aSJacob Faibussowitsch     CHKERRMPI(MPIU_Allreduce(work,reductions,n,MPIU_REAL,MPIU_MAX,A->hdr.comm));
10050716a85fSBarry Smith   } else {
10065f80ce2aSJacob Faibussowitsch     CHKERRMPI(MPIU_Allreduce(work,reductions,n,MPIU_REAL,MPIU_SUM,A->hdr.comm));
10070716a85fSBarry Smith   }
10085f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscFree(work));
1009857cbf51SRichard Tran Mills   if (type == NORM_2) {
1010a873a8cdSSam Reynolds     for (i=0; i<n; i++) reductions[i] = PetscSqrtReal(reductions[i]);
1011857cbf51SRichard Tran Mills   } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) {
1012a873a8cdSSam Reynolds     for (i=0; i<n; i++) reductions[i] /= m;
10130716a85fSBarry Smith   }
10140716a85fSBarry Smith   PetscFunctionReturn(0);
10150716a85fSBarry Smith }
10160716a85fSBarry Smith 
1017637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
10186947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10196947451fSStefano Zampini {
10206947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10216947451fSStefano Zampini   PetscInt       lda;
10226947451fSStefano Zampini 
10236947451fSStefano Zampini   PetscFunctionBegin;
1024*28b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1025*28b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10266947451fSStefano Zampini   if (!a->cvec) {
10275f80ce2aSJacob Faibussowitsch     CHKERRQ(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
10285f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
10296947451fSStefano Zampini   }
10306947451fSStefano Zampini   a->vecinuse = col + 1;
10315f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(a->A,&lda));
10325f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDAGetArray(a->A,(PetscScalar**)&a->ptrinuse));
10335f80ce2aSJacob Faibussowitsch   CHKERRQ(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
10346947451fSStefano Zampini   *v   = a->cvec;
10356947451fSStefano Zampini   PetscFunctionReturn(0);
10366947451fSStefano Zampini }
10376947451fSStefano Zampini 
10386947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10396947451fSStefano Zampini {
10406947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10416947451fSStefano Zampini 
10426947451fSStefano Zampini   PetscFunctionBegin;
1043*28b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
1044*28b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
10456947451fSStefano Zampini   a->vecinuse = 0;
10465f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDARestoreArray(a->A,(PetscScalar**)&a->ptrinuse));
10475f80ce2aSJacob Faibussowitsch   CHKERRQ(VecCUDAResetArray(a->cvec));
10486947451fSStefano Zampini   *v   = NULL;
10496947451fSStefano Zampini   PetscFunctionReturn(0);
10506947451fSStefano Zampini }
10516947451fSStefano Zampini 
10526947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10536947451fSStefano Zampini {
10546947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10556947451fSStefano Zampini   PetscInt       lda;
10566947451fSStefano Zampini 
10576947451fSStefano Zampini   PetscFunctionBegin;
1058*28b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1059*28b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10606947451fSStefano Zampini   if (!a->cvec) {
10615f80ce2aSJacob Faibussowitsch     CHKERRQ(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
10625f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
10636947451fSStefano Zampini   }
10646947451fSStefano Zampini   a->vecinuse = col + 1;
10655f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(a->A,&lda));
10665f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDAGetArrayRead(a->A,&a->ptrinuse));
10675f80ce2aSJacob Faibussowitsch   CHKERRQ(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
10685f80ce2aSJacob Faibussowitsch   CHKERRQ(VecLockReadPush(a->cvec));
10696947451fSStefano Zampini   *v   = a->cvec;
10706947451fSStefano Zampini   PetscFunctionReturn(0);
10716947451fSStefano Zampini }
10726947451fSStefano Zampini 
10736947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10746947451fSStefano Zampini {
10756947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10766947451fSStefano Zampini 
10776947451fSStefano Zampini   PetscFunctionBegin;
1078*28b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
1079*28b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
10806947451fSStefano Zampini   a->vecinuse = 0;
10815f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDARestoreArrayRead(a->A,&a->ptrinuse));
10825f80ce2aSJacob Faibussowitsch   CHKERRQ(VecLockReadPop(a->cvec));
10835f80ce2aSJacob Faibussowitsch   CHKERRQ(VecCUDAResetArray(a->cvec));
10846947451fSStefano Zampini   *v   = NULL;
10856947451fSStefano Zampini   PetscFunctionReturn(0);
10866947451fSStefano Zampini }
10876947451fSStefano Zampini 
10886947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10896947451fSStefano Zampini {
10906947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10916947451fSStefano Zampini   PetscInt       lda;
10926947451fSStefano Zampini 
10936947451fSStefano Zampini   PetscFunctionBegin;
1094*28b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1095*28b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10966947451fSStefano Zampini   if (!a->cvec) {
10975f80ce2aSJacob Faibussowitsch     CHKERRQ(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
10985f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
10996947451fSStefano Zampini   }
11006947451fSStefano Zampini   a->vecinuse = col + 1;
11015f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(a->A,&lda));
11025f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDAGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
11035f80ce2aSJacob Faibussowitsch   CHKERRQ(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
11046947451fSStefano Zampini   *v   = a->cvec;
11056947451fSStefano Zampini   PetscFunctionReturn(0);
11066947451fSStefano Zampini }
11076947451fSStefano Zampini 
11086947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11096947451fSStefano Zampini {
11106947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11116947451fSStefano Zampini 
11126947451fSStefano Zampini   PetscFunctionBegin;
1113*28b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
1114*28b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
11156947451fSStefano Zampini   a->vecinuse = 0;
11165f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDARestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
11175f80ce2aSJacob Faibussowitsch   CHKERRQ(VecCUDAResetArray(a->cvec));
11186947451fSStefano Zampini   *v   = NULL;
11196947451fSStefano Zampini   PetscFunctionReturn(0);
11206947451fSStefano Zampini }
11216947451fSStefano Zampini 
1122637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAPlaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1123637a0070SStefano Zampini {
1124637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1125637a0070SStefano Zampini 
1126637a0070SStefano Zampini   PetscFunctionBegin;
1127*28b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1128*28b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11295f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDAPlaceArray(l->A,a));
1130637a0070SStefano Zampini   PetscFunctionReturn(0);
1131637a0070SStefano Zampini }
1132637a0070SStefano Zampini 
1133637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAResetArray_MPIDenseCUDA(Mat A)
1134637a0070SStefano Zampini {
1135637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1136637a0070SStefano Zampini 
1137637a0070SStefano Zampini   PetscFunctionBegin;
1138*28b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1139*28b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11405f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDAResetArray(l->A));
1141637a0070SStefano Zampini   PetscFunctionReturn(0);
1142637a0070SStefano Zampini }
1143637a0070SStefano Zampini 
1144d5ea218eSStefano Zampini static PetscErrorCode MatDenseCUDAReplaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1145d5ea218eSStefano Zampini {
1146d5ea218eSStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1147d5ea218eSStefano Zampini 
1148d5ea218eSStefano Zampini   PetscFunctionBegin;
1149*28b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1150*28b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11515f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDAReplaceArray(l->A,a));
1152d5ea218eSStefano Zampini   PetscFunctionReturn(0);
1153d5ea218eSStefano Zampini }
1154d5ea218eSStefano Zampini 
1155637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1156637a0070SStefano Zampini {
1157637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1158637a0070SStefano Zampini 
1159637a0070SStefano Zampini   PetscFunctionBegin;
11605f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDAGetArrayWrite(l->A,a));
1161637a0070SStefano Zampini   PetscFunctionReturn(0);
1162637a0070SStefano Zampini }
1163637a0070SStefano Zampini 
1164637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1165637a0070SStefano Zampini {
1166637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1167637a0070SStefano Zampini 
1168637a0070SStefano Zampini   PetscFunctionBegin;
11695f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDARestoreArrayWrite(l->A,a));
1170637a0070SStefano Zampini   PetscFunctionReturn(0);
1171637a0070SStefano Zampini }
1172637a0070SStefano Zampini 
1173637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1174637a0070SStefano Zampini {
1175637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1176637a0070SStefano Zampini 
1177637a0070SStefano Zampini   PetscFunctionBegin;
11785f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDAGetArrayRead(l->A,a));
1179637a0070SStefano Zampini   PetscFunctionReturn(0);
1180637a0070SStefano Zampini }
1181637a0070SStefano Zampini 
1182637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1183637a0070SStefano Zampini {
1184637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1185637a0070SStefano Zampini 
1186637a0070SStefano Zampini   PetscFunctionBegin;
11875f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDARestoreArrayRead(l->A,a));
1188637a0070SStefano Zampini   PetscFunctionReturn(0);
1189637a0070SStefano Zampini }
1190637a0070SStefano Zampini 
1191637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1192637a0070SStefano Zampini {
1193637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1194637a0070SStefano Zampini 
1195637a0070SStefano Zampini   PetscFunctionBegin;
11965f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDAGetArray(l->A,a));
1197637a0070SStefano Zampini   PetscFunctionReturn(0);
1198637a0070SStefano Zampini }
1199637a0070SStefano Zampini 
1200637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1201637a0070SStefano Zampini {
1202637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1203637a0070SStefano Zampini 
1204637a0070SStefano Zampini   PetscFunctionBegin;
12055f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseCUDARestoreArray(l->A,a));
1206637a0070SStefano Zampini   PetscFunctionReturn(0);
1207637a0070SStefano Zampini }
1208637a0070SStefano Zampini 
12096947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12106947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12116947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat,PetscInt,Vec*);
12126947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12136947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12146947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat,PetscInt,Vec*);
12155ea7661aSPierre Jolivet static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat,Mat*);
12166947451fSStefano Zampini 
1217637a0070SStefano Zampini static PetscErrorCode MatBindToCPU_MPIDenseCUDA(Mat mat,PetscBool bind)
1218637a0070SStefano Zampini {
1219637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)mat->data;
1220637a0070SStefano Zampini 
1221637a0070SStefano Zampini   PetscFunctionBegin;
1222*28b400f6SJacob Faibussowitsch   PetscCheck(!d->vecinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1223*28b400f6SJacob Faibussowitsch   PetscCheck(!d->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1224637a0070SStefano Zampini   if (d->A) {
12255f80ce2aSJacob Faibussowitsch     CHKERRQ(MatBindToCPU(d->A,bind));
1226637a0070SStefano Zampini   }
1227637a0070SStefano Zampini   mat->boundtocpu = bind;
12286947451fSStefano Zampini   if (!bind) {
12296947451fSStefano Zampini     PetscBool iscuda;
12306947451fSStefano Zampini 
12315f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectTypeCompare((PetscObject)d->cvec,VECMPICUDA,&iscuda));
12326947451fSStefano Zampini     if (!iscuda) {
12335f80ce2aSJacob Faibussowitsch       CHKERRQ(VecDestroy(&d->cvec));
1234616b8fbbSStefano Zampini     }
12355f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectTypeCompare((PetscObject)d->cmat,MATMPIDENSECUDA,&iscuda));
1236616b8fbbSStefano Zampini     if (!iscuda) {
12375f80ce2aSJacob Faibussowitsch       CHKERRQ(MatDestroy(&d->cmat));
12386947451fSStefano Zampini     }
12395f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDenseCUDA));
12405f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDenseCUDA));
12415f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDenseCUDA));
12425f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDenseCUDA));
12435f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDenseCUDA));
12445f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDenseCUDA));
12456947451fSStefano Zampini   } else {
12465f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense));
12475f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense));
12485f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense));
12495f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense));
12505f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense));
12515f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense));
1252616b8fbbSStefano Zampini   }
1253616b8fbbSStefano Zampini   if (d->cmat) {
12545f80ce2aSJacob Faibussowitsch     CHKERRQ(MatBindToCPU(d->cmat,bind));
12556947451fSStefano Zampini   }
1256637a0070SStefano Zampini   PetscFunctionReturn(0);
1257637a0070SStefano Zampini }
1258637a0070SStefano Zampini 
1259637a0070SStefano Zampini PetscErrorCode MatMPIDenseCUDASetPreallocation(Mat A, PetscScalar *d_data)
1260637a0070SStefano Zampini {
1261637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)A->data;
1262637a0070SStefano Zampini   PetscBool      iscuda;
1263637a0070SStefano Zampini 
1264637a0070SStefano Zampini   PetscFunctionBegin;
1265d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
12665f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda));
1267637a0070SStefano Zampini   if (!iscuda) PetscFunctionReturn(0);
12685f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLayoutSetUp(A->rmap));
12695f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLayoutSetUp(A->cmap));
1270637a0070SStefano Zampini   if (!d->A) {
12715f80ce2aSJacob Faibussowitsch     CHKERRQ(MatCreate(PETSC_COMM_SELF,&d->A));
12725f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogObjectParent((PetscObject)A,(PetscObject)d->A));
12735f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetSizes(d->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N));
1274637a0070SStefano Zampini   }
12755f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetType(d->A,MATSEQDENSECUDA));
12765f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSeqDenseCUDASetPreallocation(d->A,d_data));
1277637a0070SStefano Zampini   A->preallocated = PETSC_TRUE;
1278637a0070SStefano Zampini   PetscFunctionReturn(0);
1279637a0070SStefano Zampini }
1280637a0070SStefano Zampini #endif
1281637a0070SStefano Zampini 
128273a71a0fSBarry Smith static PetscErrorCode MatSetRandom_MPIDense(Mat x,PetscRandom rctx)
128373a71a0fSBarry Smith {
128473a71a0fSBarry Smith   Mat_MPIDense   *d = (Mat_MPIDense*)x->data;
128573a71a0fSBarry Smith 
128673a71a0fSBarry Smith   PetscFunctionBegin;
12875f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetRandom(d->A,rctx));
128873a71a0fSBarry Smith   PetscFunctionReturn(0);
128973a71a0fSBarry Smith }
129073a71a0fSBarry Smith 
12913b49f96aSBarry Smith static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A,PetscBool  *missing,PetscInt *d)
12923b49f96aSBarry Smith {
12933b49f96aSBarry Smith   PetscFunctionBegin;
12943b49f96aSBarry Smith   *missing = PETSC_FALSE;
12953b49f96aSBarry Smith   PetscFunctionReturn(0);
12963b49f96aSBarry Smith }
12973b49f96aSBarry Smith 
12984222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1299cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13006718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1301a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13026718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat,Mat,PetscBool*);
13036718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat,PetscViewer);
1304cc48ffa7SToby Isaac 
13058965ea79SLois Curfman McInnes /* -------------------------------------------------------------------*/
130609dc0095SBarry Smith static struct _MatOps MatOps_Values = { MatSetValues_MPIDense,
130709dc0095SBarry Smith                                         MatGetRow_MPIDense,
130809dc0095SBarry Smith                                         MatRestoreRow_MPIDense,
130909dc0095SBarry Smith                                         MatMult_MPIDense,
131097304618SKris Buschelman                                 /*  4*/ MatMultAdd_MPIDense,
13117c922b88SBarry Smith                                         MatMultTranspose_MPIDense,
13127c922b88SBarry Smith                                         MatMultTransposeAdd_MPIDense,
1313f4259b30SLisandro Dalcin                                         NULL,
1314f4259b30SLisandro Dalcin                                         NULL,
1315f4259b30SLisandro Dalcin                                         NULL,
1316f4259b30SLisandro Dalcin                                 /* 10*/ NULL,
1317f4259b30SLisandro Dalcin                                         NULL,
1318f4259b30SLisandro Dalcin                                         NULL,
1319f4259b30SLisandro Dalcin                                         NULL,
132009dc0095SBarry Smith                                         MatTranspose_MPIDense,
132197304618SKris Buschelman                                 /* 15*/ MatGetInfo_MPIDense,
13226e4ee0c6SHong Zhang                                         MatEqual_MPIDense,
132309dc0095SBarry Smith                                         MatGetDiagonal_MPIDense,
13245b2fa520SLois Curfman McInnes                                         MatDiagonalScale_MPIDense,
132509dc0095SBarry Smith                                         MatNorm_MPIDense,
132697304618SKris Buschelman                                 /* 20*/ MatAssemblyBegin_MPIDense,
132709dc0095SBarry Smith                                         MatAssemblyEnd_MPIDense,
132809dc0095SBarry Smith                                         MatSetOption_MPIDense,
132909dc0095SBarry Smith                                         MatZeroEntries_MPIDense,
1330d519adbfSMatthew Knepley                                 /* 24*/ MatZeroRows_MPIDense,
1331f4259b30SLisandro Dalcin                                         NULL,
1332f4259b30SLisandro Dalcin                                         NULL,
1333f4259b30SLisandro Dalcin                                         NULL,
1334f4259b30SLisandro Dalcin                                         NULL,
13354994cf47SJed Brown                                 /* 29*/ MatSetUp_MPIDense,
1336f4259b30SLisandro Dalcin                                         NULL,
1337f4259b30SLisandro Dalcin                                         NULL,
1338c56a70eeSBarry Smith                                         MatGetDiagonalBlock_MPIDense,
1339f4259b30SLisandro Dalcin                                         NULL,
1340d519adbfSMatthew Knepley                                 /* 34*/ MatDuplicate_MPIDense,
1341f4259b30SLisandro Dalcin                                         NULL,
1342f4259b30SLisandro Dalcin                                         NULL,
1343f4259b30SLisandro Dalcin                                         NULL,
1344f4259b30SLisandro Dalcin                                         NULL,
1345d519adbfSMatthew Knepley                                 /* 39*/ MatAXPY_MPIDense,
13467dae84e0SHong Zhang                                         MatCreateSubMatrices_MPIDense,
1347f4259b30SLisandro Dalcin                                         NULL,
134809dc0095SBarry Smith                                         MatGetValues_MPIDense,
1349a76f77c3SStefano Zampini                                         MatCopy_MPIDense,
1350f4259b30SLisandro Dalcin                                 /* 44*/ NULL,
135109dc0095SBarry Smith                                         MatScale_MPIDense,
13527d68702bSBarry Smith                                         MatShift_Basic,
1353f4259b30SLisandro Dalcin                                         NULL,
1354f4259b30SLisandro Dalcin                                         NULL,
135573a71a0fSBarry Smith                                 /* 49*/ MatSetRandom_MPIDense,
1356f4259b30SLisandro Dalcin                                         NULL,
1357f4259b30SLisandro Dalcin                                         NULL,
1358f4259b30SLisandro Dalcin                                         NULL,
1359f4259b30SLisandro Dalcin                                         NULL,
1360f4259b30SLisandro Dalcin                                 /* 54*/ NULL,
1361f4259b30SLisandro Dalcin                                         NULL,
1362f4259b30SLisandro Dalcin                                         NULL,
1363f4259b30SLisandro Dalcin                                         NULL,
1364f4259b30SLisandro Dalcin                                         NULL,
13657dae84e0SHong Zhang                                 /* 59*/ MatCreateSubMatrix_MPIDense,
1366b9b97703SBarry Smith                                         MatDestroy_MPIDense,
1367b9b97703SBarry Smith                                         MatView_MPIDense,
1368f4259b30SLisandro Dalcin                                         NULL,
1369f4259b30SLisandro Dalcin                                         NULL,
1370f4259b30SLisandro Dalcin                                 /* 64*/ NULL,
1371f4259b30SLisandro Dalcin                                         NULL,
1372f4259b30SLisandro Dalcin                                         NULL,
1373f4259b30SLisandro Dalcin                                         NULL,
1374f4259b30SLisandro Dalcin                                         NULL,
1375f4259b30SLisandro Dalcin                                 /* 69*/ NULL,
1376f4259b30SLisandro Dalcin                                         NULL,
1377f4259b30SLisandro Dalcin                                         NULL,
1378f4259b30SLisandro Dalcin                                         NULL,
1379f4259b30SLisandro Dalcin                                         NULL,
1380f4259b30SLisandro Dalcin                                 /* 74*/ NULL,
1381f4259b30SLisandro Dalcin                                         NULL,
1382f4259b30SLisandro Dalcin                                         NULL,
1383f4259b30SLisandro Dalcin                                         NULL,
1384f4259b30SLisandro Dalcin                                         NULL,
1385f4259b30SLisandro Dalcin                                 /* 79*/ NULL,
1386f4259b30SLisandro Dalcin                                         NULL,
1387f4259b30SLisandro Dalcin                                         NULL,
1388f4259b30SLisandro Dalcin                                         NULL,
13895bba2384SShri Abhyankar                                 /* 83*/ MatLoad_MPIDense,
1390f4259b30SLisandro Dalcin                                         NULL,
1391f4259b30SLisandro Dalcin                                         NULL,
1392f4259b30SLisandro Dalcin                                         NULL,
1393f4259b30SLisandro Dalcin                                         NULL,
1394f4259b30SLisandro Dalcin                                         NULL,
1395f4259b30SLisandro Dalcin                                 /* 89*/ NULL,
1396f4259b30SLisandro Dalcin                                         NULL,
1397f4259b30SLisandro Dalcin                                         NULL,
1398f4259b30SLisandro Dalcin                                         NULL,
1399f4259b30SLisandro Dalcin                                         NULL,
1400f4259b30SLisandro Dalcin                                 /* 94*/ NULL,
1401f4259b30SLisandro Dalcin                                         NULL,
14026718818eSStefano Zampini                                         MatMatTransposeMultSymbolic_MPIDense_MPIDense,
1403cc48ffa7SToby Isaac                                         MatMatTransposeMultNumeric_MPIDense_MPIDense,
1404f4259b30SLisandro Dalcin                                         NULL,
14054222ddf1SHong Zhang                                 /* 99*/ MatProductSetFromOptions_MPIDense,
1406f4259b30SLisandro Dalcin                                         NULL,
1407f4259b30SLisandro Dalcin                                         NULL,
1408ba337c44SJed Brown                                         MatConjugate_MPIDense,
1409f4259b30SLisandro Dalcin                                         NULL,
1410f4259b30SLisandro Dalcin                                 /*104*/ NULL,
1411ba337c44SJed Brown                                         MatRealPart_MPIDense,
1412ba337c44SJed Brown                                         MatImaginaryPart_MPIDense,
1413f4259b30SLisandro Dalcin                                         NULL,
1414f4259b30SLisandro Dalcin                                         NULL,
1415f4259b30SLisandro Dalcin                                 /*109*/ NULL,
1416f4259b30SLisandro Dalcin                                         NULL,
1417f4259b30SLisandro Dalcin                                         NULL,
141849a6ff4bSBarry Smith                                         MatGetColumnVector_MPIDense,
14193b49f96aSBarry Smith                                         MatMissingDiagonal_MPIDense,
1420f4259b30SLisandro Dalcin                                 /*114*/ NULL,
1421f4259b30SLisandro Dalcin                                         NULL,
1422f4259b30SLisandro Dalcin                                         NULL,
1423f4259b30SLisandro Dalcin                                         NULL,
1424f4259b30SLisandro Dalcin                                         NULL,
1425f4259b30SLisandro Dalcin                                 /*119*/ NULL,
1426f4259b30SLisandro Dalcin                                         NULL,
1427f4259b30SLisandro Dalcin                                         NULL,
1428f4259b30SLisandro Dalcin                                         NULL,
1429f4259b30SLisandro Dalcin                                         NULL,
1430f4259b30SLisandro Dalcin                                 /*124*/ NULL,
1431a873a8cdSSam Reynolds                                         MatGetColumnReductions_MPIDense,
1432f4259b30SLisandro Dalcin                                         NULL,
1433f4259b30SLisandro Dalcin                                         NULL,
1434f4259b30SLisandro Dalcin                                         NULL,
1435f4259b30SLisandro Dalcin                                 /*129*/ NULL,
1436f4259b30SLisandro Dalcin                                         NULL,
14376718818eSStefano Zampini                                         MatTransposeMatMultSymbolic_MPIDense_MPIDense,
1438cb20be35SHong Zhang                                         MatTransposeMatMultNumeric_MPIDense_MPIDense,
1439f4259b30SLisandro Dalcin                                         NULL,
1440f4259b30SLisandro Dalcin                                 /*134*/ NULL,
1441f4259b30SLisandro Dalcin                                         NULL,
1442f4259b30SLisandro Dalcin                                         NULL,
1443f4259b30SLisandro Dalcin                                         NULL,
1444f4259b30SLisandro Dalcin                                         NULL,
1445f4259b30SLisandro Dalcin                                 /*139*/ NULL,
1446f4259b30SLisandro Dalcin                                         NULL,
1447f4259b30SLisandro Dalcin                                         NULL,
1448f4259b30SLisandro Dalcin                                         NULL,
1449f4259b30SLisandro Dalcin                                         NULL,
14504222ddf1SHong Zhang                                         MatCreateMPIMatConcatenateSeqMat_MPIDense,
1451f4259b30SLisandro Dalcin                                 /*145*/ NULL,
1452f4259b30SLisandro Dalcin                                         NULL,
1453f4259b30SLisandro Dalcin                                         NULL
1454ba337c44SJed Brown };
14558965ea79SLois Curfman McInnes 
14567087cfbeSBarry Smith PetscErrorCode  MatMPIDenseSetPreallocation_MPIDense(Mat mat,PetscScalar *data)
1457a23d5eceSKris Buschelman {
1458637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
1459637a0070SStefano Zampini   PetscBool      iscuda;
1460a23d5eceSKris Buschelman 
1461a23d5eceSKris Buschelman   PetscFunctionBegin;
1462*28b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
14635f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLayoutSetUp(mat->rmap));
14645f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLayoutSetUp(mat->cmap));
1465637a0070SStefano Zampini   if (!a->A) {
14665f80ce2aSJacob Faibussowitsch     CHKERRQ(MatCreate(PETSC_COMM_SELF,&a->A));
14675f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A));
14685f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetSizes(a->A,mat->rmap->n,mat->cmap->N,mat->rmap->n,mat->cmap->N));
1469637a0070SStefano Zampini   }
14705f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectTypeCompare((PetscObject)mat,MATMPIDENSECUDA,&iscuda));
14715f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE));
14725f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSeqDenseSetPreallocation(a->A,data));
1473637a0070SStefano Zampini   mat->preallocated = PETSC_TRUE;
1474a23d5eceSKris Buschelman   PetscFunctionReturn(0);
1475a23d5eceSKris Buschelman }
1476a23d5eceSKris Buschelman 
14774e29119aSPierre Jolivet PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
14784e29119aSPierre Jolivet {
14794e29119aSPierre Jolivet   Mat            B,C;
14804e29119aSPierre Jolivet 
14814e29119aSPierre Jolivet   PetscFunctionBegin;
14825f80ce2aSJacob Faibussowitsch   CHKERRQ(MatMPIAIJGetLocalMat(A,MAT_INITIAL_MATRIX,&C));
14835f80ce2aSJacob Faibussowitsch   CHKERRQ(MatConvert_SeqAIJ_SeqDense(C,MATSEQDENSE,MAT_INITIAL_MATRIX,&B));
14845f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDestroy(&C));
14854e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
14864e29119aSPierre Jolivet     C = *newmat;
14874e29119aSPierre Jolivet   } else C = NULL;
14885f80ce2aSJacob Faibussowitsch   CHKERRQ(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A),B,A->cmap->n,!C?MAT_INITIAL_MATRIX:MAT_REUSE_MATRIX,&C));
14895f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDestroy(&B));
14904e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
14915f80ce2aSJacob Faibussowitsch     CHKERRQ(MatHeaderReplace(A,&C));
14924e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
14934e29119aSPierre Jolivet   PetscFunctionReturn(0);
14944e29119aSPierre Jolivet }
14954e29119aSPierre Jolivet 
14964e29119aSPierre Jolivet PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
14974e29119aSPierre Jolivet {
14984e29119aSPierre Jolivet   Mat            B,C;
14994e29119aSPierre Jolivet 
15004e29119aSPierre Jolivet   PetscFunctionBegin;
15015f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLocalMatrix(A,&C));
15025f80ce2aSJacob Faibussowitsch   CHKERRQ(MatConvert_SeqDense_SeqAIJ(C,MATSEQAIJ,MAT_INITIAL_MATRIX,&B));
15034e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
15044e29119aSPierre Jolivet     C = *newmat;
15054e29119aSPierre Jolivet   } else C = NULL;
15065f80ce2aSJacob Faibussowitsch   CHKERRQ(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A),B,A->cmap->n,!C?MAT_INITIAL_MATRIX:MAT_REUSE_MATRIX,&C));
15075f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDestroy(&B));
15084e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
15095f80ce2aSJacob Faibussowitsch     CHKERRQ(MatHeaderReplace(A,&C));
15104e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
15114e29119aSPierre Jolivet   PetscFunctionReturn(0);
15124e29119aSPierre Jolivet }
15134e29119aSPierre Jolivet 
151465b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
1515cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15168baccfbdSHong Zhang {
15178ea901baSHong Zhang   Mat            mat_elemental;
151832d7a744SHong Zhang   PetscScalar    *v;
151932d7a744SHong Zhang   PetscInt       m=A->rmap->n,N=A->cmap->N,rstart=A->rmap->rstart,i,*rows,*cols;
15208ea901baSHong Zhang 
15218baccfbdSHong Zhang   PetscFunctionBegin;
1522378336b6SHong Zhang   if (reuse == MAT_REUSE_MATRIX) {
1523378336b6SHong Zhang     mat_elemental = *newmat;
15245f80ce2aSJacob Faibussowitsch     CHKERRQ(MatZeroEntries(*newmat));
1525378336b6SHong Zhang   } else {
15265f80ce2aSJacob Faibussowitsch     CHKERRQ(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental));
15275f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetSizes(mat_elemental,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N));
15285f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetType(mat_elemental,MATELEMENTAL));
15295f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetUp(mat_elemental));
15305f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetOption(mat_elemental,MAT_ROW_ORIENTED,PETSC_FALSE));
1531378336b6SHong Zhang   }
1532378336b6SHong Zhang 
15335f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscMalloc2(m,&rows,N,&cols));
153432d7a744SHong Zhang   for (i=0; i<N; i++) cols[i] = i;
153532d7a744SHong Zhang   for (i=0; i<m; i++) rows[i] = rstart + i;
15368ea901baSHong Zhang 
1537637a0070SStefano Zampini   /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */
15385f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArray(A,&v));
15395f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetValues(mat_elemental,m,rows,N,cols,v,ADD_VALUES));
15405f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY));
15415f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY));
15425f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArray(A,&v));
15435f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscFree2(rows,cols));
15448ea901baSHong Zhang 
1545511c6705SHong Zhang   if (reuse == MAT_INPLACE_MATRIX) {
15465f80ce2aSJacob Faibussowitsch     CHKERRQ(MatHeaderReplace(A,&mat_elemental));
15478ea901baSHong Zhang   } else {
15488ea901baSHong Zhang     *newmat = mat_elemental;
15498ea901baSHong Zhang   }
15508baccfbdSHong Zhang   PetscFunctionReturn(0);
15518baccfbdSHong Zhang }
155265b80a83SHong Zhang #endif
15538baccfbdSHong Zhang 
1554af53bab2SHong Zhang static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A,PetscInt col,PetscScalar **vals)
155586aefd0dSHong Zhang {
155686aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
155786aefd0dSHong Zhang 
155886aefd0dSHong Zhang   PetscFunctionBegin;
15595f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetColumn(mat->A,col,vals));
156086aefd0dSHong Zhang   PetscFunctionReturn(0);
156186aefd0dSHong Zhang }
156286aefd0dSHong Zhang 
1563af53bab2SHong Zhang static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A,PetscScalar **vals)
156486aefd0dSHong Zhang {
156586aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
156686aefd0dSHong Zhang 
156786aefd0dSHong Zhang   PetscFunctionBegin;
15685f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreColumn(mat->A,vals));
156986aefd0dSHong Zhang   PetscFunctionReturn(0);
157086aefd0dSHong Zhang }
157186aefd0dSHong Zhang 
157294e2cb23SJakub Kruzik PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm,Mat inmat,PetscInt n,MatReuse scall,Mat *outmat)
157394e2cb23SJakub Kruzik {
157494e2cb23SJakub Kruzik   Mat_MPIDense   *mat;
157594e2cb23SJakub Kruzik   PetscInt       m,nloc,N;
157694e2cb23SJakub Kruzik 
157794e2cb23SJakub Kruzik   PetscFunctionBegin;
15785f80ce2aSJacob Faibussowitsch   CHKERRQ(MatGetSize(inmat,&m,&N));
15795f80ce2aSJacob Faibussowitsch   CHKERRQ(MatGetLocalSize(inmat,NULL,&nloc));
158094e2cb23SJakub Kruzik   if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */
158194e2cb23SJakub Kruzik     PetscInt sum;
158294e2cb23SJakub Kruzik 
158394e2cb23SJakub Kruzik     if (n == PETSC_DECIDE) {
15845f80ce2aSJacob Faibussowitsch       CHKERRQ(PetscSplitOwnership(comm,&n,&N));
158594e2cb23SJakub Kruzik     }
158694e2cb23SJakub Kruzik     /* Check sum(n) = N */
15875f80ce2aSJacob Faibussowitsch     CHKERRMPI(MPIU_Allreduce(&n,&sum,1,MPIU_INT,MPI_SUM,comm));
15882c71b3e2SJacob Faibussowitsch     PetscCheckFalse(sum != N,PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT,sum,N);
158994e2cb23SJakub Kruzik 
15905f80ce2aSJacob Faibussowitsch     CHKERRQ(MatCreateDense(comm,m,n,PETSC_DETERMINE,N,NULL,outmat));
15915f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetOption(*outmat,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE));
159294e2cb23SJakub Kruzik   }
159394e2cb23SJakub Kruzik 
159494e2cb23SJakub Kruzik   /* numeric phase */
159594e2cb23SJakub Kruzik   mat = (Mat_MPIDense*)(*outmat)->data;
15965f80ce2aSJacob Faibussowitsch   CHKERRQ(MatCopy(inmat,mat->A,SAME_NONZERO_PATTERN));
15975f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyBegin(*outmat,MAT_FINAL_ASSEMBLY));
15985f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyEnd(*outmat,MAT_FINAL_ASSEMBLY));
159994e2cb23SJakub Kruzik   PetscFunctionReturn(0);
160094e2cb23SJakub Kruzik }
160194e2cb23SJakub Kruzik 
1602637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1603637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDenseCUDA_MPIDense(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1604637a0070SStefano Zampini {
1605637a0070SStefano Zampini   Mat            B;
1606637a0070SStefano Zampini   Mat_MPIDense   *m;
1607637a0070SStefano Zampini 
1608637a0070SStefano Zampini   PetscFunctionBegin;
1609637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
16105f80ce2aSJacob Faibussowitsch     CHKERRQ(MatDuplicate(M,MAT_COPY_VALUES,newmat));
1611637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
16125f80ce2aSJacob Faibussowitsch     CHKERRQ(MatCopy(M,*newmat,SAME_NONZERO_PATTERN));
1613637a0070SStefano Zampini   }
1614637a0070SStefano Zampini 
1615637a0070SStefano Zampini   B    = *newmat;
16165f80ce2aSJacob Faibussowitsch   CHKERRQ(MatBindToCPU_MPIDenseCUDA(B,PETSC_TRUE));
16175f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscFree(B->defaultvectype));
16185f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscStrallocpy(VECSTANDARD,&B->defaultvectype));
16195f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSE));
16205f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",NULL));
16215f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",NULL));
16225f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",NULL));
16235f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",NULL));
16245f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",NULL));
16255f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",NULL));
16265f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",NULL));
16275f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",NULL));
16285f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",NULL));
16295f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",NULL));
16305f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",NULL));
16315f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",NULL));
16325f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",NULL));
16335f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",NULL));
1634637a0070SStefano Zampini   m    = (Mat_MPIDense*)(B)->data;
1635637a0070SStefano Zampini   if (m->A) {
16365f80ce2aSJacob Faibussowitsch     CHKERRQ(MatConvert(m->A,MATSEQDENSE,MAT_INPLACE_MATRIX,&m->A));
16375f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetUpMultiply_MPIDense(B));
1638637a0070SStefano Zampini   }
1639637a0070SStefano Zampini   B->ops->bindtocpu = NULL;
1640637a0070SStefano Zampini   B->offloadmask    = PETSC_OFFLOAD_CPU;
1641637a0070SStefano Zampini   PetscFunctionReturn(0);
1642637a0070SStefano Zampini }
1643637a0070SStefano Zampini 
1644637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDense_MPIDenseCUDA(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1645637a0070SStefano Zampini {
1646637a0070SStefano Zampini   Mat            B;
1647637a0070SStefano Zampini   Mat_MPIDense   *m;
1648637a0070SStefano Zampini 
1649637a0070SStefano Zampini   PetscFunctionBegin;
1650637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
16515f80ce2aSJacob Faibussowitsch     CHKERRQ(MatDuplicate(M,MAT_COPY_VALUES,newmat));
1652637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
16535f80ce2aSJacob Faibussowitsch     CHKERRQ(MatCopy(M,*newmat,SAME_NONZERO_PATTERN));
1654637a0070SStefano Zampini   }
1655637a0070SStefano Zampini 
1656637a0070SStefano Zampini   B    = *newmat;
16575f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscFree(B->defaultvectype));
16585f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscStrallocpy(VECCUDA,&B->defaultvectype));
16595f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSECUDA));
16605f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",                    MatConvert_MPIDenseCUDA_MPIDense));
16615f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",        MatProductSetFromOptions_MPIAIJ_MPIDense));
16625f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
16635f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",        MatProductSetFromOptions_MPIDense_MPIAIJ));
16645f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
16655f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",                                MatDenseCUDAGetArray_MPIDenseCUDA));
16665f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",                            MatDenseCUDAGetArrayRead_MPIDenseCUDA));
16675f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",                           MatDenseCUDAGetArrayWrite_MPIDenseCUDA));
16685f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",                            MatDenseCUDARestoreArray_MPIDenseCUDA));
16695f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",                        MatDenseCUDARestoreArrayRead_MPIDenseCUDA));
16705f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",                       MatDenseCUDARestoreArrayWrite_MPIDenseCUDA));
16715f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",                              MatDenseCUDAPlaceArray_MPIDenseCUDA));
16725f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",                              MatDenseCUDAResetArray_MPIDenseCUDA));
16735f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",                            MatDenseCUDAReplaceArray_MPIDenseCUDA));
1674f5ff9c66SStefano Zampini   m    = (Mat_MPIDense*)(B->data);
1675637a0070SStefano Zampini   if (m->A) {
16765f80ce2aSJacob Faibussowitsch     CHKERRQ(MatConvert(m->A,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&m->A));
16775f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetUpMultiply_MPIDense(B));
1678637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_BOTH;
1679637a0070SStefano Zampini   } else {
1680637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_UNALLOCATED;
1681637a0070SStefano Zampini   }
16825f80ce2aSJacob Faibussowitsch   CHKERRQ(MatBindToCPU_MPIDenseCUDA(B,PETSC_FALSE));
1683637a0070SStefano Zampini 
1684637a0070SStefano Zampini   B->ops->bindtocpu = MatBindToCPU_MPIDenseCUDA;
1685637a0070SStefano Zampini   PetscFunctionReturn(0);
1686637a0070SStefano Zampini }
1687637a0070SStefano Zampini #endif
1688637a0070SStefano Zampini 
16896947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
16906947451fSStefano Zampini {
16916947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
16926947451fSStefano Zampini   PetscInt       lda;
16936947451fSStefano Zampini 
16946947451fSStefano Zampini   PetscFunctionBegin;
1695*28b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1696*28b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
16976947451fSStefano Zampini   if (!a->cvec) {
16985f80ce2aSJacob Faibussowitsch     CHKERRQ(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
16996947451fSStefano Zampini   }
17006947451fSStefano Zampini   a->vecinuse = col + 1;
17015f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(a->A,&lda));
17025f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArray(a->A,(PetscScalar**)&a->ptrinuse));
17035f80ce2aSJacob Faibussowitsch   CHKERRQ(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
17046947451fSStefano Zampini   *v   = a->cvec;
17056947451fSStefano Zampini   PetscFunctionReturn(0);
17066947451fSStefano Zampini }
17076947451fSStefano Zampini 
17086947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
17096947451fSStefano Zampini {
17106947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17116947451fSStefano Zampini 
17126947451fSStefano Zampini   PetscFunctionBegin;
1713*28b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
1714*28b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
17156947451fSStefano Zampini   a->vecinuse = 0;
17165f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArray(a->A,(PetscScalar**)&a->ptrinuse));
17175f80ce2aSJacob Faibussowitsch   CHKERRQ(VecResetArray(a->cvec));
17186947451fSStefano Zampini   *v   = NULL;
17196947451fSStefano Zampini   PetscFunctionReturn(0);
17206947451fSStefano Zampini }
17216947451fSStefano Zampini 
17226947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
17236947451fSStefano Zampini {
17246947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17256947451fSStefano Zampini   PetscInt       lda;
17266947451fSStefano Zampini 
17276947451fSStefano Zampini   PetscFunctionBegin;
1728*28b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1729*28b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17306947451fSStefano Zampini   if (!a->cvec) {
17315f80ce2aSJacob Faibussowitsch     CHKERRQ(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
17326947451fSStefano Zampini   }
17336947451fSStefano Zampini   a->vecinuse = col + 1;
17345f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(a->A,&lda));
17355f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayRead(a->A,&a->ptrinuse));
17365f80ce2aSJacob Faibussowitsch   CHKERRQ(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
17375f80ce2aSJacob Faibussowitsch   CHKERRQ(VecLockReadPush(a->cvec));
17386947451fSStefano Zampini   *v   = a->cvec;
17396947451fSStefano Zampini   PetscFunctionReturn(0);
17406947451fSStefano Zampini }
17416947451fSStefano Zampini 
17426947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
17436947451fSStefano Zampini {
17446947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17456947451fSStefano Zampini 
17466947451fSStefano Zampini   PetscFunctionBegin;
17475f80ce2aSJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
17485f80ce2aSJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
17496947451fSStefano Zampini   a->vecinuse = 0;
17505f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayRead(a->A,&a->ptrinuse));
17515f80ce2aSJacob Faibussowitsch   CHKERRQ(VecLockReadPop(a->cvec));
17525f80ce2aSJacob Faibussowitsch   CHKERRQ(VecResetArray(a->cvec));
17536947451fSStefano Zampini   *v   = NULL;
17546947451fSStefano Zampini   PetscFunctionReturn(0);
17556947451fSStefano Zampini }
17566947451fSStefano Zampini 
17576947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
17586947451fSStefano Zampini {
17596947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17606947451fSStefano Zampini   PetscInt       lda;
17616947451fSStefano Zampini 
17626947451fSStefano Zampini   PetscFunctionBegin;
17635f80ce2aSJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
17645f80ce2aSJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17656947451fSStefano Zampini   if (!a->cvec) {
17665f80ce2aSJacob Faibussowitsch     CHKERRQ(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
17676947451fSStefano Zampini   }
17686947451fSStefano Zampini   a->vecinuse = col + 1;
17695f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(a->A,&lda));
17705f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
17715f80ce2aSJacob Faibussowitsch   CHKERRQ(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
17726947451fSStefano Zampini   *v   = a->cvec;
17736947451fSStefano Zampini   PetscFunctionReturn(0);
17746947451fSStefano Zampini }
17756947451fSStefano Zampini 
17766947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
17776947451fSStefano Zampini {
17786947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
17796947451fSStefano Zampini 
17806947451fSStefano Zampini   PetscFunctionBegin;
17815f80ce2aSJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
17825f80ce2aSJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
17836947451fSStefano Zampini   a->vecinuse = 0;
17845f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
17855f80ce2aSJacob Faibussowitsch   CHKERRQ(VecResetArray(a->cvec));
17866947451fSStefano Zampini   *v   = NULL;
17876947451fSStefano Zampini   PetscFunctionReturn(0);
17886947451fSStefano Zampini }
17896947451fSStefano Zampini 
17905ea7661aSPierre Jolivet PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A,PetscInt cbegin,PetscInt cend,Mat *v)
17915ea7661aSPierre Jolivet {
17925ea7661aSPierre Jolivet   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
1793616b8fbbSStefano Zampini   Mat_MPIDense   *c;
1794616b8fbbSStefano Zampini   MPI_Comm       comm;
1795616b8fbbSStefano Zampini   PetscBool      setup = PETSC_FALSE;
17965ea7661aSPierre Jolivet 
17975ea7661aSPierre Jolivet   PetscFunctionBegin;
17985f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectGetComm((PetscObject)A,&comm));
17995f80ce2aSJacob Faibussowitsch   PetscCheck(!a->vecinuse,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
18005f80ce2aSJacob Faibussowitsch   PetscCheck(!a->matinuse,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18015ea7661aSPierre Jolivet   if (!a->cmat) {
1802616b8fbbSStefano Zampini     setup = PETSC_TRUE;
18035f80ce2aSJacob Faibussowitsch     CHKERRQ(MatCreate(comm,&a->cmat));
18045f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cmat));
18055f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetType(a->cmat,((PetscObject)A)->type_name));
18065f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLayoutReference(A->rmap,&a->cmat->rmap));
18075f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLayoutSetSize(a->cmat->cmap,cend-cbegin));
18085f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLayoutSetUp(a->cmat->cmap));
1809616b8fbbSStefano Zampini   } else if (cend-cbegin != a->cmat->cmap->N) {
1810616b8fbbSStefano Zampini     setup = PETSC_TRUE;
18115f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLayoutDestroy(&a->cmat->cmap));
18125f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLayoutCreate(comm,&a->cmat->cmap));
18135f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLayoutSetSize(a->cmat->cmap,cend-cbegin));
18145f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscLayoutSetUp(a->cmat->cmap));
18155ea7661aSPierre Jolivet   }
1816616b8fbbSStefano Zampini   c = (Mat_MPIDense*)a->cmat->data;
18175f80ce2aSJacob Faibussowitsch   PetscCheck(!c->A,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18185f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetSubMatrix(a->A,cbegin,cend,&c->A));
1819616b8fbbSStefano Zampini   if (setup) { /* do we really need this? */
18205f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetUpMultiply_MPIDense(a->cmat));
1821616b8fbbSStefano Zampini   }
1822616b8fbbSStefano Zampini   a->cmat->preallocated = PETSC_TRUE;
1823616b8fbbSStefano Zampini   a->cmat->assembled = PETSC_TRUE;
18245ea7661aSPierre Jolivet   a->matinuse = cbegin + 1;
18255ea7661aSPierre Jolivet   *v = a->cmat;
18265ea7661aSPierre Jolivet   PetscFunctionReturn(0);
18275ea7661aSPierre Jolivet }
18285ea7661aSPierre Jolivet 
18295ea7661aSPierre Jolivet PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A,Mat *v)
18305ea7661aSPierre Jolivet {
18315ea7661aSPierre Jolivet   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
1832616b8fbbSStefano Zampini   Mat_MPIDense *c;
18335ea7661aSPierre Jolivet 
18345ea7661aSPierre Jolivet   PetscFunctionBegin;
18355f80ce2aSJacob Faibussowitsch   PetscCheck(a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetSubMatrix() first");
18365f80ce2aSJacob Faibussowitsch   PetscCheck(a->cmat,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal matrix");
18375f80ce2aSJacob Faibussowitsch   PetscCheck(*v == a->cmat,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Not the matrix obtained from MatDenseGetSubMatrix()");
18385ea7661aSPierre Jolivet   a->matinuse = 0;
1839616b8fbbSStefano Zampini   c    = (Mat_MPIDense*)a->cmat->data;
18405f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreSubMatrix(a->A,&c->A));
18415ea7661aSPierre Jolivet   *v   = NULL;
18425ea7661aSPierre Jolivet   PetscFunctionReturn(0);
18435ea7661aSPierre Jolivet }
18445ea7661aSPierre Jolivet 
1845002bc6daSRichard Tran Mills /*MC
1846002bc6daSRichard Tran Mills    MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices.
1847002bc6daSRichard Tran Mills 
1848002bc6daSRichard Tran Mills    Options Database Keys:
1849002bc6daSRichard Tran Mills . -mat_type mpidense - sets the matrix type to "mpidense" during a call to MatSetFromOptions()
1850002bc6daSRichard Tran Mills 
1851002bc6daSRichard Tran Mills   Level: beginner
1852002bc6daSRichard Tran Mills 
1853002bc6daSRichard Tran Mills .seealso: MatCreateDense()
1854002bc6daSRichard Tran Mills 
1855002bc6daSRichard Tran Mills M*/
18568cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreate_MPIDense(Mat mat)
1857273d9f13SBarry Smith {
1858273d9f13SBarry Smith   Mat_MPIDense   *a;
1859273d9f13SBarry Smith 
1860273d9f13SBarry Smith   PetscFunctionBegin;
18615f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscNewLog(mat,&a));
1862b0a32e0cSBarry Smith   mat->data = (void*)a;
18635f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscMemcpy(mat->ops,&MatOps_Values,sizeof(struct _MatOps)));
1864273d9f13SBarry Smith 
1865273d9f13SBarry Smith   mat->insertmode = NOT_SET_VALUES;
1866273d9f13SBarry Smith 
1867273d9f13SBarry Smith   /* build cache for off array entries formed */
1868273d9f13SBarry Smith   a->donotstash = PETSC_FALSE;
18692205254eSKarl Rupp 
18705f80ce2aSJacob Faibussowitsch   CHKERRQ(MatStashCreate_Private(PetscObjectComm((PetscObject)mat),1,&mat->stash));
1871273d9f13SBarry Smith 
1872273d9f13SBarry Smith   /* stuff used for matrix vector multiply */
1873f4259b30SLisandro Dalcin   a->lvec        = NULL;
1874f4259b30SLisandro Dalcin   a->Mvctx       = NULL;
1875273d9f13SBarry Smith   a->roworiented = PETSC_TRUE;
1876273d9f13SBarry Smith 
18775f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",MatDenseGetLDA_MPIDense));
18785f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",MatDenseSetLDA_MPIDense));
18795f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",MatDenseGetArray_MPIDense));
18805f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",MatDenseRestoreArray_MPIDense));
18815f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",MatDenseGetArrayRead_MPIDense));
18825f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",MatDenseRestoreArrayRead_MPIDense));
18835f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",MatDenseGetArrayWrite_MPIDense));
18845f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",MatDenseRestoreArrayWrite_MPIDense));
18855f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",MatDensePlaceArray_MPIDense));
18865f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",MatDenseResetArray_MPIDense));
18875f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",MatDenseReplaceArray_MPIDense));
18885f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense));
18895f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense));
18905f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense));
18915f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense));
18925f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense));
18935f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense));
18945f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",MatDenseGetSubMatrix_MPIDense));
18955f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",MatDenseRestoreSubMatrix_MPIDense));
18965f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpiaij_mpidense_C",MatConvert_MPIAIJ_MPIDense));
18975f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpiaij_C",MatConvert_MPIDense_MPIAIJ));
18988baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
18995f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",MatConvert_MPIDense_Elemental));
19008baccfbdSHong Zhang #endif
1901d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
19025f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",MatConvert_Dense_ScaLAPACK));
1903d24d4204SJose E. Roman #endif
1904637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
19055f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpidensecuda_C",MatConvert_MPIDense_MPIDenseCUDA));
1906637a0070SStefano Zampini #endif
19075f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",MatMPIDenseSetPreallocation_MPIDense));
19085f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
19095f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
19106718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
19115f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
19125f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
19136718818eSStefano Zampini #endif
19148949adfdSHong Zhang 
19155f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",MatDenseGetColumn_MPIDense));
19165f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",MatDenseRestoreColumn_MPIDense));
19175f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectChangeTypeName((PetscObject)mat,MATMPIDENSE));
1918273d9f13SBarry Smith   PetscFunctionReturn(0);
1919273d9f13SBarry Smith }
1920273d9f13SBarry Smith 
1921209238afSKris Buschelman /*MC
1922637a0070SStefano Zampini    MATMPIDENSECUDA - MATMPIDENSECUDA = "mpidensecuda" - A matrix type to be used for distributed dense matrices on GPUs.
1923637a0070SStefano Zampini 
1924637a0070SStefano Zampini    Options Database Keys:
1925637a0070SStefano Zampini . -mat_type mpidensecuda - sets the matrix type to "mpidensecuda" during a call to MatSetFromOptions()
1926637a0070SStefano Zampini 
1927637a0070SStefano Zampini   Level: beginner
1928637a0070SStefano Zampini 
1929637a0070SStefano Zampini .seealso:
1930637a0070SStefano Zampini 
1931637a0070SStefano Zampini M*/
1932637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1933a4af0ceeSJacob Faibussowitsch #include <petsc/private/deviceimpl.h>
1934637a0070SStefano Zampini PETSC_EXTERN PetscErrorCode MatCreate_MPIDenseCUDA(Mat B)
1935637a0070SStefano Zampini {
1936637a0070SStefano Zampini   PetscFunctionBegin;
19375f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscDeviceInitialize(PETSC_DEVICE_CUDA));
19385f80ce2aSJacob Faibussowitsch   CHKERRQ(MatCreate_MPIDense(B));
19395f80ce2aSJacob Faibussowitsch   CHKERRQ(MatConvert_MPIDense_MPIDenseCUDA(B,MATMPIDENSECUDA,MAT_INPLACE_MATRIX,&B));
1940637a0070SStefano Zampini   PetscFunctionReturn(0);
1941637a0070SStefano Zampini }
1942637a0070SStefano Zampini #endif
1943637a0070SStefano Zampini 
1944637a0070SStefano Zampini /*MC
1945002d173eSKris Buschelman    MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices.
1946209238afSKris Buschelman 
1947209238afSKris Buschelman    This matrix type is identical to MATSEQDENSE when constructed with a single process communicator,
1948209238afSKris Buschelman    and MATMPIDENSE otherwise.
1949209238afSKris Buschelman 
1950209238afSKris Buschelman    Options Database Keys:
1951209238afSKris Buschelman . -mat_type dense - sets the matrix type to "dense" during a call to MatSetFromOptions()
1952209238afSKris Buschelman 
1953209238afSKris Buschelman   Level: beginner
1954209238afSKris Buschelman 
19556947451fSStefano Zampini .seealso: MATSEQDENSE,MATMPIDENSE,MATDENSECUDA
19566947451fSStefano Zampini M*/
19576947451fSStefano Zampini 
19586947451fSStefano Zampini /*MC
19596947451fSStefano Zampini    MATDENSECUDA - MATDENSECUDA = "densecuda" - A matrix type to be used for dense matrices on GPUs.
19606947451fSStefano Zampini 
19616947451fSStefano Zampini    This matrix type is identical to MATSEQDENSECUDA when constructed with a single process communicator,
19626947451fSStefano Zampini    and MATMPIDENSECUDA otherwise.
19636947451fSStefano Zampini 
19646947451fSStefano Zampini    Options Database Keys:
19656947451fSStefano Zampini . -mat_type densecuda - sets the matrix type to "densecuda" during a call to MatSetFromOptions()
19666947451fSStefano Zampini 
19676947451fSStefano Zampini   Level: beginner
19686947451fSStefano Zampini 
19696947451fSStefano Zampini .seealso: MATSEQDENSECUDA,MATMPIDENSECUDA,MATDENSE
1970209238afSKris Buschelman M*/
1971209238afSKris Buschelman 
1972273d9f13SBarry Smith /*@C
1973273d9f13SBarry Smith    MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries
1974273d9f13SBarry Smith 
19758f490ea3SStefano Zampini    Collective
1976273d9f13SBarry Smith 
1977273d9f13SBarry Smith    Input Parameters:
19781c4f3114SJed Brown .  B - the matrix
19790298fd71SBarry Smith -  data - optional location of matrix data.  Set data=NULL for PETSc
1980273d9f13SBarry Smith    to control all matrix memory allocation.
1981273d9f13SBarry Smith 
1982273d9f13SBarry Smith    Notes:
1983273d9f13SBarry Smith    The dense format is fully compatible with standard Fortran 77
1984273d9f13SBarry Smith    storage by columns.
1985273d9f13SBarry Smith 
1986273d9f13SBarry Smith    The data input variable is intended primarily for Fortran programmers
1987273d9f13SBarry Smith    who wish to allocate their own matrix memory space.  Most users should
19880298fd71SBarry Smith    set data=NULL.
1989273d9f13SBarry Smith 
1990273d9f13SBarry Smith    Level: intermediate
1991273d9f13SBarry Smith 
1992273d9f13SBarry Smith .seealso: MatCreate(), MatCreateSeqDense(), MatSetValues()
1993273d9f13SBarry Smith @*/
19941c4f3114SJed Brown PetscErrorCode  MatMPIDenseSetPreallocation(Mat B,PetscScalar *data)
1995273d9f13SBarry Smith {
1996273d9f13SBarry Smith   PetscFunctionBegin;
1997d5ea218eSStefano Zampini   PetscValidHeaderSpecific(B,MAT_CLASSID,1);
19985f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscTryMethod(B,"MatMPIDenseSetPreallocation_C",(Mat,PetscScalar*),(B,data)));
1999273d9f13SBarry Smith   PetscFunctionReturn(0);
2000273d9f13SBarry Smith }
2001273d9f13SBarry Smith 
2002d3042a70SBarry Smith /*@
2003637a0070SStefano Zampini    MatDensePlaceArray - Allows one to replace the array in a dense matrix with an
2004d3042a70SBarry Smith    array provided by the user. This is useful to avoid copying an array
2005d3042a70SBarry Smith    into a matrix
2006d3042a70SBarry Smith 
2007d3042a70SBarry Smith    Not Collective
2008d3042a70SBarry Smith 
2009d3042a70SBarry Smith    Input Parameters:
2010d3042a70SBarry Smith +  mat - the matrix
2011d3042a70SBarry Smith -  array - the array in column major order
2012d3042a70SBarry Smith 
2013d3042a70SBarry Smith    Notes:
2014d3042a70SBarry Smith    You can return to the original array with a call to MatDenseResetArray(). The user is responsible for freeing this array; it will not be
2015d3042a70SBarry Smith    freed when the matrix is destroyed.
2016d3042a70SBarry Smith 
2017d3042a70SBarry Smith    Level: developer
2018d3042a70SBarry Smith 
2019d3042a70SBarry Smith .seealso: MatDenseGetArray(), MatDenseResetArray(), VecPlaceArray(), VecGetArray(), VecRestoreArray(), VecReplaceArray(), VecResetArray()
2020d3042a70SBarry Smith 
2021d3042a70SBarry Smith @*/
2022637a0070SStefano Zampini PetscErrorCode  MatDensePlaceArray(Mat mat,const PetscScalar *array)
2023d3042a70SBarry Smith {
2024d3042a70SBarry Smith   PetscFunctionBegin;
2025d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
20265f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscUseMethod(mat,"MatDensePlaceArray_C",(Mat,const PetscScalar*),(mat,array)));
20275f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectStateIncrease((PetscObject)mat));
2028637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2029637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2030637a0070SStefano Zampini #endif
2031d3042a70SBarry Smith   PetscFunctionReturn(0);
2032d3042a70SBarry Smith }
2033d3042a70SBarry Smith 
2034d3042a70SBarry Smith /*@
2035d3042a70SBarry Smith    MatDenseResetArray - Resets the matrix array to that it previously had before the call to MatDensePlaceArray()
2036d3042a70SBarry Smith 
2037d3042a70SBarry Smith    Not Collective
2038d3042a70SBarry Smith 
2039d3042a70SBarry Smith    Input Parameters:
2040d3042a70SBarry Smith .  mat - the matrix
2041d3042a70SBarry Smith 
2042d3042a70SBarry Smith    Notes:
2043d3042a70SBarry Smith    You can only call this after a call to MatDensePlaceArray()
2044d3042a70SBarry Smith 
2045d3042a70SBarry Smith    Level: developer
2046d3042a70SBarry Smith 
2047d3042a70SBarry Smith .seealso: MatDenseGetArray(), MatDensePlaceArray(), VecPlaceArray(), VecGetArray(), VecRestoreArray(), VecReplaceArray(), VecResetArray()
2048d3042a70SBarry Smith 
2049d3042a70SBarry Smith @*/
2050d3042a70SBarry Smith PetscErrorCode  MatDenseResetArray(Mat mat)
2051d3042a70SBarry Smith {
2052d3042a70SBarry Smith   PetscFunctionBegin;
2053d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
20545f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscUseMethod(mat,"MatDenseResetArray_C",(Mat),(mat)));
20555f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectStateIncrease((PetscObject)mat));
2056d3042a70SBarry Smith   PetscFunctionReturn(0);
2057d3042a70SBarry Smith }
2058d3042a70SBarry Smith 
2059d5ea218eSStefano Zampini /*@
2060d5ea218eSStefano Zampini    MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an
2061d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2062d5ea218eSStefano Zampini    into a matrix
2063d5ea218eSStefano Zampini 
2064d5ea218eSStefano Zampini    Not Collective
2065d5ea218eSStefano Zampini 
2066d5ea218eSStefano Zampini    Input Parameters:
2067d5ea218eSStefano Zampini +  mat - the matrix
2068d5ea218eSStefano Zampini -  array - the array in column major order
2069d5ea218eSStefano Zampini 
2070d5ea218eSStefano Zampini    Notes:
2071d5ea218eSStefano Zampini    The memory passed in MUST be obtained with PetscMalloc() and CANNOT be
2072d5ea218eSStefano Zampini    freed by the user. It will be freed when the matrix is destroyed.
2073d5ea218eSStefano Zampini 
2074d5ea218eSStefano Zampini    Level: developer
2075d5ea218eSStefano Zampini 
2076d5ea218eSStefano Zampini .seealso: MatDenseGetArray(), VecReplaceArray()
2077d5ea218eSStefano Zampini @*/
2078d5ea218eSStefano Zampini PetscErrorCode  MatDenseReplaceArray(Mat mat,const PetscScalar *array)
2079d5ea218eSStefano Zampini {
2080d5ea218eSStefano Zampini   PetscFunctionBegin;
2081d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
20825f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscUseMethod(mat,"MatDenseReplaceArray_C",(Mat,const PetscScalar*),(mat,array)));
20835f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectStateIncrease((PetscObject)mat));
2084d5ea218eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
2085d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2086d5ea218eSStefano Zampini #endif
2087d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2088d5ea218eSStefano Zampini }
2089d5ea218eSStefano Zampini 
2090637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
20918965ea79SLois Curfman McInnes /*@C
2092637a0070SStefano Zampini    MatDenseCUDAPlaceArray - Allows one to replace the GPU array in a dense matrix with an
2093637a0070SStefano Zampini    array provided by the user. This is useful to avoid copying an array
2094637a0070SStefano Zampini    into a matrix
2095637a0070SStefano Zampini 
2096637a0070SStefano Zampini    Not Collective
2097637a0070SStefano Zampini 
2098637a0070SStefano Zampini    Input Parameters:
2099637a0070SStefano Zampini +  mat - the matrix
2100637a0070SStefano Zampini -  array - the array in column major order
2101637a0070SStefano Zampini 
2102637a0070SStefano Zampini    Notes:
2103637a0070SStefano Zampini    You can return to the original array with a call to MatDenseCUDAResetArray(). The user is responsible for freeing this array; it will not be
2104637a0070SStefano Zampini    freed when the matrix is destroyed. The array must have been allocated with cudaMalloc().
2105637a0070SStefano Zampini 
2106637a0070SStefano Zampini    Level: developer
2107637a0070SStefano Zampini 
2108637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAResetArray()
2109637a0070SStefano Zampini @*/
2110637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAPlaceArray(Mat mat,const PetscScalar *array)
2111637a0070SStefano Zampini {
2112637a0070SStefano Zampini   PetscFunctionBegin;
2113d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
21145f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscUseMethod(mat,"MatDenseCUDAPlaceArray_C",(Mat,const PetscScalar*),(mat,array)));
21155f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectStateIncrease((PetscObject)mat));
2116637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2117637a0070SStefano Zampini   PetscFunctionReturn(0);
2118637a0070SStefano Zampini }
2119637a0070SStefano Zampini 
2120637a0070SStefano Zampini /*@C
2121637a0070SStefano Zampini    MatDenseCUDAResetArray - Resets the matrix array to that it previously had before the call to MatDenseCUDAPlaceArray()
2122637a0070SStefano Zampini 
2123637a0070SStefano Zampini    Not Collective
2124637a0070SStefano Zampini 
2125637a0070SStefano Zampini    Input Parameters:
2126637a0070SStefano Zampini .  mat - the matrix
2127637a0070SStefano Zampini 
2128637a0070SStefano Zampini    Notes:
2129637a0070SStefano Zampini    You can only call this after a call to MatDenseCUDAPlaceArray()
2130637a0070SStefano Zampini 
2131637a0070SStefano Zampini    Level: developer
2132637a0070SStefano Zampini 
2133637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAPlaceArray()
2134637a0070SStefano Zampini 
2135637a0070SStefano Zampini @*/
2136637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAResetArray(Mat mat)
2137637a0070SStefano Zampini {
2138637a0070SStefano Zampini   PetscFunctionBegin;
2139d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
21405f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscUseMethod(mat,"MatDenseCUDAResetArray_C",(Mat),(mat)));
21415f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectStateIncrease((PetscObject)mat));
2142637a0070SStefano Zampini   PetscFunctionReturn(0);
2143637a0070SStefano Zampini }
2144637a0070SStefano Zampini 
2145637a0070SStefano Zampini /*@C
2146d5ea218eSStefano Zampini    MatDenseCUDAReplaceArray - Allows one to replace the GPU array in a dense matrix with an
2147d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2148d5ea218eSStefano Zampini    into a matrix
2149d5ea218eSStefano Zampini 
2150d5ea218eSStefano Zampini    Not Collective
2151d5ea218eSStefano Zampini 
2152d5ea218eSStefano Zampini    Input Parameters:
2153d5ea218eSStefano Zampini +  mat - the matrix
2154d5ea218eSStefano Zampini -  array - the array in column major order
2155d5ea218eSStefano Zampini 
2156d5ea218eSStefano Zampini    Notes:
2157d5ea218eSStefano Zampini    This permanently replaces the GPU array and frees the memory associated with the old GPU array.
2158d5ea218eSStefano Zampini    The memory passed in CANNOT be freed by the user. It will be freed
2159d5ea218eSStefano Zampini    when the matrix is destroyed. The array should respect the matrix leading dimension.
2160d5ea218eSStefano Zampini 
2161d5ea218eSStefano Zampini    Level: developer
2162d5ea218eSStefano Zampini 
2163d5ea218eSStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAPlaceArray(), MatDenseCUDAResetArray()
2164d5ea218eSStefano Zampini @*/
2165d5ea218eSStefano Zampini PetscErrorCode  MatDenseCUDAReplaceArray(Mat mat,const PetscScalar *array)
2166d5ea218eSStefano Zampini {
2167d5ea218eSStefano Zampini   PetscFunctionBegin;
2168d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
21695f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscUseMethod(mat,"MatDenseCUDAReplaceArray_C",(Mat,const PetscScalar*),(mat,array)));
21705f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectStateIncrease((PetscObject)mat));
2171d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2172d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2173d5ea218eSStefano Zampini }
2174d5ea218eSStefano Zampini 
2175d5ea218eSStefano Zampini /*@C
2176637a0070SStefano Zampini    MatDenseCUDAGetArrayWrite - Provides write access to the CUDA buffer inside a dense matrix.
2177637a0070SStefano Zampini 
2178637a0070SStefano Zampini    Not Collective
2179637a0070SStefano Zampini 
2180637a0070SStefano Zampini    Input Parameters:
2181637a0070SStefano Zampini .  A - the matrix
2182637a0070SStefano Zampini 
2183637a0070SStefano Zampini    Output Parameters
2184637a0070SStefano Zampini .  array - the GPU array in column major order
2185637a0070SStefano Zampini 
2186637a0070SStefano Zampini    Notes:
2187637a0070SStefano Zampini    The data on the GPU may not be updated due to operations done on the CPU. If you need updated data, use MatDenseCUDAGetArray(). The array must be restored with MatDenseCUDARestoreArrayWrite() when no longer needed.
2188637a0070SStefano Zampini 
2189637a0070SStefano Zampini    Level: developer
2190637a0070SStefano Zampini 
2191637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayRead(), MatDenseCUDARestoreArrayRead()
2192637a0070SStefano Zampini @*/
2193637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayWrite(Mat A, PetscScalar **a)
2194637a0070SStefano Zampini {
2195637a0070SStefano Zampini   PetscFunctionBegin;
2196d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
21975f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscUseMethod(A,"MatDenseCUDAGetArrayWrite_C",(Mat,PetscScalar**),(A,a)));
21985f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectStateIncrease((PetscObject)A));
2199637a0070SStefano Zampini   PetscFunctionReturn(0);
2200637a0070SStefano Zampini }
2201637a0070SStefano Zampini 
2202637a0070SStefano Zampini /*@C
2203637a0070SStefano Zampini    MatDenseCUDARestoreArrayWrite - Restore write access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArrayWrite().
2204637a0070SStefano Zampini 
2205637a0070SStefano Zampini    Not Collective
2206637a0070SStefano Zampini 
2207637a0070SStefano Zampini    Input Parameters:
2208637a0070SStefano Zampini +  A - the matrix
2209637a0070SStefano Zampini -  array - the GPU array in column major order
2210637a0070SStefano Zampini 
2211637a0070SStefano Zampini    Notes:
2212637a0070SStefano Zampini 
2213637a0070SStefano Zampini    Level: developer
2214637a0070SStefano Zampini 
2215637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead(), MatDenseCUDAGetArrayRead()
2216637a0070SStefano Zampini @*/
2217637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayWrite(Mat A, PetscScalar **a)
2218637a0070SStefano Zampini {
2219637a0070SStefano Zampini   PetscFunctionBegin;
2220d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
22215f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscUseMethod(A,"MatDenseCUDARestoreArrayWrite_C",(Mat,PetscScalar**),(A,a)));
22225f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectStateIncrease((PetscObject)A));
2223637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2224637a0070SStefano Zampini   PetscFunctionReturn(0);
2225637a0070SStefano Zampini }
2226637a0070SStefano Zampini 
2227637a0070SStefano Zampini /*@C
2228637a0070SStefano Zampini    MatDenseCUDAGetArrayRead - Provides read-only access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArrayRead() when no longer needed.
2229637a0070SStefano Zampini 
2230637a0070SStefano Zampini    Not Collective
2231637a0070SStefano Zampini 
2232637a0070SStefano Zampini    Input Parameters:
2233637a0070SStefano Zampini .  A - the matrix
2234637a0070SStefano Zampini 
2235637a0070SStefano Zampini    Output Parameters
2236637a0070SStefano Zampini .  array - the GPU array in column major order
2237637a0070SStefano Zampini 
2238637a0070SStefano Zampini    Notes:
2239637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2240637a0070SStefano Zampini 
2241637a0070SStefano Zampini    Level: developer
2242637a0070SStefano Zampini 
2243637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead()
2244637a0070SStefano Zampini @*/
2245637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayRead(Mat A, const PetscScalar **a)
2246637a0070SStefano Zampini {
2247637a0070SStefano Zampini   PetscFunctionBegin;
2248d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
22495f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscUseMethod(A,"MatDenseCUDAGetArrayRead_C",(Mat,const PetscScalar**),(A,a)));
2250637a0070SStefano Zampini   PetscFunctionReturn(0);
2251637a0070SStefano Zampini }
2252637a0070SStefano Zampini 
2253637a0070SStefano Zampini /*@C
2254637a0070SStefano Zampini    MatDenseCUDARestoreArrayRead - Restore read-only access to the CUDA buffer inside a dense matrix previously obtained with a call to MatDenseCUDAGetArrayRead().
2255637a0070SStefano Zampini 
2256637a0070SStefano Zampini    Not Collective
2257637a0070SStefano Zampini 
2258637a0070SStefano Zampini    Input Parameters:
2259637a0070SStefano Zampini +  A - the matrix
2260637a0070SStefano Zampini -  array - the GPU array in column major order
2261637a0070SStefano Zampini 
2262637a0070SStefano Zampini    Notes:
2263637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2264637a0070SStefano Zampini 
2265637a0070SStefano Zampini    Level: developer
2266637a0070SStefano Zampini 
2267637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDAGetArrayRead()
2268637a0070SStefano Zampini @*/
2269637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayRead(Mat A, const PetscScalar **a)
2270637a0070SStefano Zampini {
2271637a0070SStefano Zampini   PetscFunctionBegin;
22725f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscUseMethod(A,"MatDenseCUDARestoreArrayRead_C",(Mat,const PetscScalar**),(A,a)));
2273637a0070SStefano Zampini   PetscFunctionReturn(0);
2274637a0070SStefano Zampini }
2275637a0070SStefano Zampini 
2276637a0070SStefano Zampini /*@C
2277637a0070SStefano Zampini    MatDenseCUDAGetArray - Provides access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArray() when no longer needed.
2278637a0070SStefano Zampini 
2279637a0070SStefano Zampini    Not Collective
2280637a0070SStefano Zampini 
2281637a0070SStefano Zampini    Input Parameters:
2282637a0070SStefano Zampini .  A - the matrix
2283637a0070SStefano Zampini 
2284637a0070SStefano Zampini    Output Parameters
2285637a0070SStefano Zampini .  array - the GPU array in column major order
2286637a0070SStefano Zampini 
2287637a0070SStefano Zampini    Notes:
2288637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite(). For read-only access, use MatDenseCUDAGetArrayRead().
2289637a0070SStefano Zampini 
2290637a0070SStefano Zampini    Level: developer
2291637a0070SStefano Zampini 
2292637a0070SStefano Zampini .seealso: MatDenseCUDAGetArrayRead(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead()
2293637a0070SStefano Zampini @*/
2294637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArray(Mat A, PetscScalar **a)
2295637a0070SStefano Zampini {
2296637a0070SStefano Zampini   PetscFunctionBegin;
2297d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
22985f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscUseMethod(A,"MatDenseCUDAGetArray_C",(Mat,PetscScalar**),(A,a)));
22995f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectStateIncrease((PetscObject)A));
2300637a0070SStefano Zampini   PetscFunctionReturn(0);
2301637a0070SStefano Zampini }
2302637a0070SStefano Zampini 
2303637a0070SStefano Zampini /*@C
2304637a0070SStefano Zampini    MatDenseCUDARestoreArray - Restore access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArray().
2305637a0070SStefano Zampini 
2306637a0070SStefano Zampini    Not Collective
2307637a0070SStefano Zampini 
2308637a0070SStefano Zampini    Input Parameters:
2309637a0070SStefano Zampini +  A - the matrix
2310637a0070SStefano Zampini -  array - the GPU array in column major order
2311637a0070SStefano Zampini 
2312637a0070SStefano Zampini    Notes:
2313637a0070SStefano Zampini 
2314637a0070SStefano Zampini    Level: developer
2315637a0070SStefano Zampini 
2316637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead(), MatDenseCUDAGetArrayRead()
2317637a0070SStefano Zampini @*/
2318637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArray(Mat A, PetscScalar **a)
2319637a0070SStefano Zampini {
2320637a0070SStefano Zampini   PetscFunctionBegin;
2321d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
23225f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscUseMethod(A,"MatDenseCUDARestoreArray_C",(Mat,PetscScalar**),(A,a)));
23235f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectStateIncrease((PetscObject)A));
2324637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2325637a0070SStefano Zampini   PetscFunctionReturn(0);
2326637a0070SStefano Zampini }
2327637a0070SStefano Zampini #endif
2328637a0070SStefano Zampini 
2329637a0070SStefano Zampini /*@C
2330637a0070SStefano Zampini    MatCreateDense - Creates a matrix in dense format.
23318965ea79SLois Curfman McInnes 
2332d083f849SBarry Smith    Collective
2333db81eaa0SLois Curfman McInnes 
23348965ea79SLois Curfman McInnes    Input Parameters:
2335db81eaa0SLois Curfman McInnes +  comm - MPI communicator
23368965ea79SLois Curfman McInnes .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2337db81eaa0SLois Curfman McInnes .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
23388965ea79SLois Curfman McInnes .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2339db81eaa0SLois Curfman McInnes .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
23406cfe35ddSJose E. Roman -  data - optional location of matrix data.  Set data=NULL (PETSC_NULL_SCALAR for Fortran users) for PETSc
2341dfc5480cSLois Curfman McInnes    to control all matrix memory allocation.
23428965ea79SLois Curfman McInnes 
23438965ea79SLois Curfman McInnes    Output Parameter:
2344477f1c0bSLois Curfman McInnes .  A - the matrix
23458965ea79SLois Curfman McInnes 
2346b259b22eSLois Curfman McInnes    Notes:
234739ddd567SLois Curfman McInnes    The dense format is fully compatible with standard Fortran 77
234839ddd567SLois Curfman McInnes    storage by columns.
2349002bc6daSRichard Tran Mills    Note that, although local portions of the matrix are stored in column-major
2350002bc6daSRichard Tran Mills    order, the matrix is partitioned across MPI ranks by row.
23518965ea79SLois Curfman McInnes 
235218f449edSLois Curfman McInnes    The data input variable is intended primarily for Fortran programmers
235318f449edSLois Curfman McInnes    who wish to allocate their own matrix memory space.  Most users should
23546cfe35ddSJose E. Roman    set data=NULL (PETSC_NULL_SCALAR for Fortran users).
235518f449edSLois Curfman McInnes 
23568965ea79SLois Curfman McInnes    The user MUST specify either the local or global matrix dimensions
23578965ea79SLois Curfman McInnes    (possibly both).
23588965ea79SLois Curfman McInnes 
2359027ccd11SLois Curfman McInnes    Level: intermediate
2360027ccd11SLois Curfman McInnes 
236139ddd567SLois Curfman McInnes .seealso: MatCreate(), MatCreateSeqDense(), MatSetValues()
23628965ea79SLois Curfman McInnes @*/
236369b1f4b7SBarry Smith PetscErrorCode  MatCreateDense(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
23648965ea79SLois Curfman McInnes {
236513f74950SBarry Smith   PetscMPIInt    size;
23668965ea79SLois Curfman McInnes 
23673a40ed3dSBarry Smith   PetscFunctionBegin;
23685f80ce2aSJacob Faibussowitsch   CHKERRQ(MatCreate(comm,A));
23695f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetSizes(*A,m,n,M,N));
23705f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Comm_size(comm,&size));
2371273d9f13SBarry Smith   if (size > 1) {
23728f490ea3SStefano Zampini     PetscBool havedata = (PetscBool)!!data;
23738f490ea3SStefano Zampini 
23745f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetType(*A,MATMPIDENSE));
23755f80ce2aSJacob Faibussowitsch     CHKERRQ(MatMPIDenseSetPreallocation(*A,data));
23765f80ce2aSJacob Faibussowitsch     CHKERRMPI(MPIU_Allreduce(MPI_IN_PLACE,&havedata,1,MPIU_BOOL,MPI_LOR,comm));
23778f490ea3SStefano Zampini     if (havedata) {  /* user provided data array, so no need to assemble */
23785f80ce2aSJacob Faibussowitsch       CHKERRQ(MatSetUpMultiply_MPIDense(*A));
23796cfe35ddSJose E. Roman       (*A)->assembled = PETSC_TRUE;
23806cfe35ddSJose E. Roman     }
2381273d9f13SBarry Smith   } else {
23825f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetType(*A,MATSEQDENSE));
23835f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSeqDenseSetPreallocation(*A,data));
23848c469469SLois Curfman McInnes   }
23853a40ed3dSBarry Smith   PetscFunctionReturn(0);
23868965ea79SLois Curfman McInnes }
23878965ea79SLois Curfman McInnes 
2388637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2389637a0070SStefano Zampini /*@C
2390637a0070SStefano Zampini    MatCreateDenseCUDA - Creates a matrix in dense format using CUDA.
2391637a0070SStefano Zampini 
2392637a0070SStefano Zampini    Collective
2393637a0070SStefano Zampini 
2394637a0070SStefano Zampini    Input Parameters:
2395637a0070SStefano Zampini +  comm - MPI communicator
2396637a0070SStefano Zampini .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2397637a0070SStefano Zampini .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
2398637a0070SStefano Zampini .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2399637a0070SStefano Zampini .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
2400637a0070SStefano Zampini -  data - optional location of GPU matrix data.  Set data=NULL for PETSc
2401637a0070SStefano Zampini    to control matrix memory allocation.
2402637a0070SStefano Zampini 
2403637a0070SStefano Zampini    Output Parameter:
2404637a0070SStefano Zampini .  A - the matrix
2405637a0070SStefano Zampini 
2406637a0070SStefano Zampini    Notes:
2407637a0070SStefano Zampini 
2408637a0070SStefano Zampini    Level: intermediate
2409637a0070SStefano Zampini 
2410637a0070SStefano Zampini .seealso: MatCreate(), MatCreateDense()
2411637a0070SStefano Zampini @*/
2412637a0070SStefano Zampini PetscErrorCode  MatCreateDenseCUDA(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
2413637a0070SStefano Zampini {
2414637a0070SStefano Zampini   PetscMPIInt    size;
2415637a0070SStefano Zampini 
2416637a0070SStefano Zampini   PetscFunctionBegin;
24175f80ce2aSJacob Faibussowitsch   CHKERRQ(MatCreate(comm,A));
2418637a0070SStefano Zampini   PetscValidLogicalCollectiveBool(*A,!!data,6);
24195f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetSizes(*A,m,n,M,N));
24205f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Comm_size(comm,&size));
2421637a0070SStefano Zampini   if (size > 1) {
24225f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetType(*A,MATMPIDENSECUDA));
24235f80ce2aSJacob Faibussowitsch     CHKERRQ(MatMPIDenseCUDASetPreallocation(*A,data));
2424637a0070SStefano Zampini     if (data) {  /* user provided data array, so no need to assemble */
24255f80ce2aSJacob Faibussowitsch       CHKERRQ(MatSetUpMultiply_MPIDense(*A));
2426637a0070SStefano Zampini       (*A)->assembled = PETSC_TRUE;
2427637a0070SStefano Zampini     }
2428637a0070SStefano Zampini   } else {
24295f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetType(*A,MATSEQDENSECUDA));
24305f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSeqDenseCUDASetPreallocation(*A,data));
2431637a0070SStefano Zampini   }
2432637a0070SStefano Zampini   PetscFunctionReturn(0);
2433637a0070SStefano Zampini }
2434637a0070SStefano Zampini #endif
2435637a0070SStefano Zampini 
24366849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat A,MatDuplicateOption cpvalues,Mat *newmat)
24378965ea79SLois Curfman McInnes {
24388965ea79SLois Curfman McInnes   Mat            mat;
24393501a2bdSLois Curfman McInnes   Mat_MPIDense   *a,*oldmat = (Mat_MPIDense*)A->data;
24408965ea79SLois Curfman McInnes 
24413a40ed3dSBarry Smith   PetscFunctionBegin;
2442f4259b30SLisandro Dalcin   *newmat = NULL;
24435f80ce2aSJacob Faibussowitsch   CHKERRQ(MatCreate(PetscObjectComm((PetscObject)A),&mat));
24445f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetSizes(mat,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N));
24455f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetType(mat,((PetscObject)A)->type_name));
2446834f8fabSBarry Smith   a       = (Mat_MPIDense*)mat->data;
24475aa7edbeSHong Zhang 
2448d5f3da31SBarry Smith   mat->factortype   = A->factortype;
2449c456f294SBarry Smith   mat->assembled    = PETSC_TRUE;
2450273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
24518965ea79SLois Curfman McInnes 
2452e0fa3b82SLois Curfman McInnes   mat->insertmode = NOT_SET_VALUES;
24533782ba37SSatish Balay   a->donotstash   = oldmat->donotstash;
2454e04c1aa4SHong Zhang 
24555f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLayoutReference(A->rmap,&mat->rmap));
24565f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLayoutReference(A->cmap,&mat->cmap));
24578965ea79SLois Curfman McInnes 
24585f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDuplicate(oldmat->A,cpvalues,&a->A));
24595f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A));
24605f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetUpMultiply_MPIDense(mat));
246101b82886SBarry Smith 
24628965ea79SLois Curfman McInnes   *newmat = mat;
24633a40ed3dSBarry Smith   PetscFunctionReturn(0);
24648965ea79SLois Curfman McInnes }
24658965ea79SLois Curfman McInnes 
2466eb91f321SVaclav Hapla PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer)
2467eb91f321SVaclav Hapla {
246887d5ce66SSatish Balay   PetscBool      isbinary;
246987d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
247087d5ce66SSatish Balay   PetscBool      ishdf5;
247187d5ce66SSatish Balay #endif
2472eb91f321SVaclav Hapla 
2473eb91f321SVaclav Hapla   PetscFunctionBegin;
2474eb91f321SVaclav Hapla   PetscValidHeaderSpecific(newMat,MAT_CLASSID,1);
2475eb91f321SVaclav Hapla   PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2);
2476eb91f321SVaclav Hapla   /* force binary viewer to load .info file if it has not yet done so */
24775f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscViewerSetUp(viewer));
24785f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary));
247987d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
24805f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERHDF5,  &ishdf5));
248187d5ce66SSatish Balay #endif
2482eb91f321SVaclav Hapla   if (isbinary) {
24835f80ce2aSJacob Faibussowitsch     CHKERRQ(MatLoad_Dense_Binary(newMat,viewer));
2484eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5)
248587d5ce66SSatish Balay   } else if (ishdf5) {
24865f80ce2aSJacob Faibussowitsch     CHKERRQ(MatLoad_Dense_HDF5(newMat,viewer));
2487eb91f321SVaclav Hapla #endif
248898921bdaSJacob Faibussowitsch   } else SETERRQ(PetscObjectComm((PetscObject)newMat),PETSC_ERR_SUP,"Viewer type %s not yet supported for reading %s matrices",((PetscObject)viewer)->type_name,((PetscObject)newMat)->type_name);
2489eb91f321SVaclav Hapla   PetscFunctionReturn(0);
2490eb91f321SVaclav Hapla }
2491eb91f321SVaclav Hapla 
24926718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat A,Mat B,PetscBool  *flag)
24936e4ee0c6SHong Zhang {
24946e4ee0c6SHong Zhang   Mat_MPIDense   *matB = (Mat_MPIDense*)B->data,*matA = (Mat_MPIDense*)A->data;
24956e4ee0c6SHong Zhang   Mat            a,b;
2496ace3abfcSBarry Smith   PetscBool      flg;
249790ace30eSBarry Smith 
24986e4ee0c6SHong Zhang   PetscFunctionBegin;
24996e4ee0c6SHong Zhang   a    = matA->A;
25006e4ee0c6SHong Zhang   b    = matB->A;
25015f80ce2aSJacob Faibussowitsch   CHKERRQ(MatEqual(a,b,&flg));
25025f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPIU_Allreduce(&flg,flag,1,MPIU_BOOL,MPI_LAND,PetscObjectComm((PetscObject)A)));
25036e4ee0c6SHong Zhang   PetscFunctionReturn(0);
25046e4ee0c6SHong Zhang }
250590ace30eSBarry Smith 
25066718818eSStefano Zampini PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data)
2507baa3c1c6SHong Zhang {
25086718818eSStefano Zampini   Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data;
2509baa3c1c6SHong Zhang 
2510baa3c1c6SHong Zhang   PetscFunctionBegin;
25115f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscFree2(atb->sendbuf,atb->recvcounts));
25125f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDestroy(&atb->atb));
25135f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscFree(atb));
2514baa3c1c6SHong Zhang   PetscFunctionReturn(0);
2515baa3c1c6SHong Zhang }
2516baa3c1c6SHong Zhang 
25176718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data)
2518cc48ffa7SToby Isaac {
25196718818eSStefano Zampini   Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data;
2520cc48ffa7SToby Isaac 
2521cc48ffa7SToby Isaac   PetscFunctionBegin;
25225f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscFree2(abt->buf[0],abt->buf[1]));
25235f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscFree2(abt->recvcounts,abt->recvdispls));
25245f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscFree(abt));
2525cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2526cc48ffa7SToby Isaac }
2527cc48ffa7SToby Isaac 
25286718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2529cb20be35SHong Zhang {
2530baa3c1c6SHong Zhang   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
25316718818eSStefano Zampini   Mat_TransMatMultDense *atb;
2532cb20be35SHong Zhang   MPI_Comm              comm;
25336718818eSStefano Zampini   PetscMPIInt           size,*recvcounts;
25346718818eSStefano Zampini   PetscScalar           *carray,*sendbuf;
2535637a0070SStefano Zampini   const PetscScalar     *atbarray;
2536a1f9a5e6SStefano Zampini   PetscInt              i,cN=C->cmap->N,proc,k,j,lda;
2537e68c0b26SHong Zhang   const PetscInt        *ranges;
2538cb20be35SHong Zhang 
2539cb20be35SHong Zhang   PetscFunctionBegin;
25406718818eSStefano Zampini   MatCheckProduct(C,3);
25415f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
25426718818eSStefano Zampini   atb = (Mat_TransMatMultDense *)C->product->data;
25436718818eSStefano Zampini   recvcounts = atb->recvcounts;
25446718818eSStefano Zampini   sendbuf = atb->sendbuf;
25456718818eSStefano Zampini 
25465f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectGetComm((PetscObject)A,&comm));
25475f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Comm_size(comm,&size));
2548e68c0b26SHong Zhang 
2549c5ef1628SHong Zhang   /* compute atbarray = aseq^T * bseq */
25505f80ce2aSJacob Faibussowitsch   CHKERRQ(MatTransposeMatMult(a->A,b->A,atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX,PETSC_DEFAULT,&atb->atb));
2551cb20be35SHong Zhang 
25525f80ce2aSJacob Faibussowitsch   CHKERRQ(MatGetOwnershipRanges(C,&ranges));
2553cb20be35SHong Zhang 
2554660d5466SHong Zhang   /* arrange atbarray into sendbuf */
25555f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayRead(atb->atb,&atbarray));
25565f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(atb->atb,&lda));
2557637a0070SStefano Zampini   for (proc=0, k=0; proc<size; proc++) {
2558baa3c1c6SHong Zhang     for (j=0; j<cN; j++) {
2559a1f9a5e6SStefano Zampini       for (i=ranges[proc]; i<ranges[proc+1]; i++) sendbuf[k++] = atbarray[i+j*lda];
2560cb20be35SHong Zhang     }
2561cb20be35SHong Zhang   }
25625f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayRead(atb->atb,&atbarray));
2563637a0070SStefano Zampini 
2564c5ef1628SHong Zhang   /* sum all atbarray to local values of C */
25655f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayWrite(c->A,&carray));
25665f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Reduce_scatter(sendbuf,carray,recvcounts,MPIU_SCALAR,MPIU_SUM,comm));
25675f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayWrite(c->A,&carray));
25685f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
25695f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2570cb20be35SHong Zhang   PetscFunctionReturn(0);
2571cb20be35SHong Zhang }
2572cb20be35SHong Zhang 
25736718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2574cb20be35SHong Zhang {
2575cb20be35SHong Zhang   MPI_Comm              comm;
2576baa3c1c6SHong Zhang   PetscMPIInt           size;
2577660d5466SHong Zhang   PetscInt              cm=A->cmap->n,cM,cN=B->cmap->N;
2578baa3c1c6SHong Zhang   Mat_TransMatMultDense *atb;
25796718818eSStefano Zampini   PetscBool             cisdense;
25800acaeb71SStefano Zampini   PetscInt              i;
25810acaeb71SStefano Zampini   const PetscInt        *ranges;
2582cb20be35SHong Zhang 
2583cb20be35SHong Zhang   PetscFunctionBegin;
25846718818eSStefano Zampini   MatCheckProduct(C,3);
25855f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
25865f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectGetComm((PetscObject)A,&comm));
2587cb20be35SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) {
258898921bdaSJacob Faibussowitsch     SETERRQ(comm,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2589cb20be35SHong Zhang   }
2590cb20be35SHong Zhang 
25914222ddf1SHong Zhang   /* create matrix product C */
25925f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetSizes(C,cm,B->cmap->n,A->cmap->N,B->cmap->N));
25935f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectTypeCompareAny((PetscObject)C,&cisdense,MATMPIDENSE,MATMPIDENSECUDA,""));
25946718818eSStefano Zampini   if (!cisdense) {
25955f80ce2aSJacob Faibussowitsch     CHKERRQ(MatSetType(C,((PetscObject)A)->type_name));
25966718818eSStefano Zampini   }
25975f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetUp(C));
2598baa3c1c6SHong Zhang 
25994222ddf1SHong Zhang   /* create data structure for reuse C */
26005f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Comm_size(comm,&size));
26015f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscNew(&atb));
26024222ddf1SHong Zhang   cM   = C->rmap->N;
26035f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscMalloc2(cM*cN,&atb->sendbuf,size,&atb->recvcounts));
26045f80ce2aSJacob Faibussowitsch   CHKERRQ(MatGetOwnershipRanges(C,&ranges));
26050acaeb71SStefano Zampini   for (i=0; i<size; i++) atb->recvcounts[i] = (ranges[i+1] - ranges[i])*cN;
2606baa3c1c6SHong Zhang 
26076718818eSStefano Zampini   C->product->data    = atb;
26086718818eSStefano Zampini   C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense;
2609cb20be35SHong Zhang   PetscFunctionReturn(0);
2610cb20be35SHong Zhang }
2611cb20be35SHong Zhang 
26124222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C)
2613cb20be35SHong Zhang {
2614cc48ffa7SToby Isaac   MPI_Comm              comm;
2615cc48ffa7SToby Isaac   PetscMPIInt           i, size;
2616cc48ffa7SToby Isaac   PetscInt              maxRows, bufsiz;
2617cc48ffa7SToby Isaac   PetscMPIInt           tag;
26184222ddf1SHong Zhang   PetscInt              alg;
2619cc48ffa7SToby Isaac   Mat_MatTransMultDense *abt;
26204222ddf1SHong Zhang   Mat_Product           *product = C->product;
26214222ddf1SHong Zhang   PetscBool             flg;
2622cc48ffa7SToby Isaac 
2623cc48ffa7SToby Isaac   PetscFunctionBegin;
26246718818eSStefano Zampini   MatCheckProduct(C,4);
26255f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
26264222ddf1SHong Zhang   /* check local size of A and B */
26275f80ce2aSJacob Faibussowitsch   PetscCheck(A->cmap->n == B->cmap->n,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")",A->cmap->n,B->cmap->n);
2628cc48ffa7SToby Isaac 
26295f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscStrcmp(product->alg,"allgatherv",&flg));
2630637a0070SStefano Zampini   alg  = flg ? 0 : 1;
2631cc48ffa7SToby Isaac 
26324222ddf1SHong Zhang   /* setup matrix product C */
26335f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetSizes(C,A->rmap->n,B->rmap->n,A->rmap->N,B->rmap->N));
26345f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetType(C,MATMPIDENSE));
26355f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetUp(C));
26365f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectGetNewTag((PetscObject)C,&tag));
26374222ddf1SHong Zhang 
26384222ddf1SHong Zhang   /* create data structure for reuse C */
26395f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectGetComm((PetscObject)C,&comm));
26405f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Comm_size(comm,&size));
26415f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscNew(&abt));
2642cc48ffa7SToby Isaac   abt->tag = tag;
2643faa55883SToby Isaac   abt->alg = alg;
2644faa55883SToby Isaac   switch (alg) {
26454222ddf1SHong Zhang   case 1: /* alg: "cyclic" */
2646cc48ffa7SToby Isaac     for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i]));
2647cc48ffa7SToby Isaac     bufsiz = A->cmap->N * maxRows;
26485f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscMalloc2(bufsiz,&(abt->buf[0]),bufsiz,&(abt->buf[1])));
2649faa55883SToby Isaac     break;
26504222ddf1SHong Zhang   default: /* alg: "allgatherv" */
26515f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscMalloc2(B->rmap->n * B->cmap->N, &(abt->buf[0]), B->rmap->N * B->cmap->N, &(abt->buf[1])));
26525f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscMalloc2(size,&(abt->recvcounts),size+1,&(abt->recvdispls)));
2653faa55883SToby Isaac     for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N;
2654faa55883SToby Isaac     for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i];
2655faa55883SToby Isaac     break;
2656faa55883SToby Isaac   }
2657cc48ffa7SToby Isaac 
26586718818eSStefano Zampini   C->product->data    = abt;
26596718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense;
26604222ddf1SHong Zhang   C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense;
2661cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2662cc48ffa7SToby Isaac }
2663cc48ffa7SToby Isaac 
2664faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C)
2665cc48ffa7SToby Isaac {
2666cc48ffa7SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
26676718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2668cc48ffa7SToby Isaac   MPI_Comm              comm;
2669cc48ffa7SToby Isaac   PetscMPIInt           rank,size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom;
2670f4259b30SLisandro Dalcin   PetscScalar           *sendbuf, *recvbuf=NULL, *cv;
2671cc48ffa7SToby Isaac   PetscInt              i,cK=A->cmap->N,k,j,bn;
2672cc48ffa7SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2673637a0070SStefano Zampini   const PetscScalar     *av,*bv;
267423fff9afSBarry Smith   PetscBLASInt          cm, cn, ck, alda, blda = 0, clda;
2675cc48ffa7SToby Isaac   MPI_Request           reqs[2];
2676cc48ffa7SToby Isaac   const PetscInt        *ranges;
2677cc48ffa7SToby Isaac 
2678cc48ffa7SToby Isaac   PetscFunctionBegin;
26796718818eSStefano Zampini   MatCheckProduct(C,3);
26805f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
26816718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
26825f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectGetComm((PetscObject)C,&comm));
26835f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Comm_rank(comm,&rank));
26845f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Comm_size(comm,&size));
26855f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayRead(a->A,&av));
26865f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayRead(b->A,&bv));
26875f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayWrite(c->A,&cv));
26885f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(a->A,&i));
26895f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscBLASIntCast(i,&alda));
26905f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(b->A,&i));
26915f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscBLASIntCast(i,&blda));
26925f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(c->A,&i));
26935f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscBLASIntCast(i,&clda));
26945f80ce2aSJacob Faibussowitsch   CHKERRQ(MatGetOwnershipRanges(B,&ranges));
2695cc48ffa7SToby Isaac   bn   = B->rmap->n;
2696637a0070SStefano Zampini   if (blda == bn) {
2697637a0070SStefano Zampini     sendbuf = (PetscScalar*)bv;
2698cc48ffa7SToby Isaac   } else {
2699cc48ffa7SToby Isaac     sendbuf = abt->buf[0];
2700cc48ffa7SToby Isaac     for (k = 0, i = 0; i < cK; i++) {
2701cc48ffa7SToby Isaac       for (j = 0; j < bn; j++, k++) {
2702637a0070SStefano Zampini         sendbuf[k] = bv[i * blda + j];
2703cc48ffa7SToby Isaac       }
2704cc48ffa7SToby Isaac     }
2705cc48ffa7SToby Isaac   }
2706cc48ffa7SToby Isaac   if (size > 1) {
2707cc48ffa7SToby Isaac     sendto = (rank + size - 1) % size;
2708cc48ffa7SToby Isaac     recvfrom = (rank + size + 1) % size;
2709cc48ffa7SToby Isaac   } else {
2710cc48ffa7SToby Isaac     sendto = recvfrom = 0;
2711cc48ffa7SToby Isaac   }
27125f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscBLASIntCast(cK,&ck));
27135f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscBLASIntCast(c->A->rmap->n,&cm));
2714cc48ffa7SToby Isaac   recvisfrom = rank;
2715cc48ffa7SToby Isaac   for (i = 0; i < size; i++) {
2716cc48ffa7SToby Isaac     /* we have finished receiving in sending, bufs can be read/modified */
2717cc48ffa7SToby Isaac     PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */
2718cc48ffa7SToby Isaac     PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom];
2719cc48ffa7SToby Isaac 
2720cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2721cc48ffa7SToby Isaac       /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */
2722cc48ffa7SToby Isaac       sendsiz = cK * bn;
2723cc48ffa7SToby Isaac       recvsiz = cK * nextbn;
2724cc48ffa7SToby Isaac       recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1];
27255f80ce2aSJacob Faibussowitsch       CHKERRMPI(MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0]));
27265f80ce2aSJacob Faibussowitsch       CHKERRMPI(MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1]));
2727cc48ffa7SToby Isaac     }
2728cc48ffa7SToby Isaac 
2729cc48ffa7SToby Isaac     /* local aseq * sendbuf^T */
27305f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn));
273150ce3c9cSStefano Zampini     if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","T",&cm,&cn,&ck,&_DOne,av,&alda,sendbuf,&cn,&_DZero,cv + clda * ranges[recvisfrom],&clda));
2732cc48ffa7SToby Isaac 
2733cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2734cc48ffa7SToby Isaac       /* wait for the sends and receives to complete, swap sendbuf and recvbuf */
27355f80ce2aSJacob Faibussowitsch       CHKERRMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE));
2736cc48ffa7SToby Isaac     }
2737cc48ffa7SToby Isaac     bn = nextbn;
2738cc48ffa7SToby Isaac     recvisfrom = nextrecvisfrom;
2739cc48ffa7SToby Isaac     sendbuf = recvbuf;
2740cc48ffa7SToby Isaac   }
27415f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayRead(a->A,&av));
27425f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayRead(b->A,&bv));
27435f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayWrite(c->A,&cv));
27445f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
27455f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2746cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2747cc48ffa7SToby Isaac }
2748cc48ffa7SToby Isaac 
2749faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C)
2750faa55883SToby Isaac {
2751faa55883SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
27526718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2753faa55883SToby Isaac   MPI_Comm              comm;
2754637a0070SStefano Zampini   PetscMPIInt           size;
2755637a0070SStefano Zampini   PetscScalar           *cv, *sendbuf, *recvbuf;
2756637a0070SStefano Zampini   const PetscScalar     *av,*bv;
2757637a0070SStefano Zampini   PetscInt              blda,i,cK=A->cmap->N,k,j,bn;
2758faa55883SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2759637a0070SStefano Zampini   PetscBLASInt          cm, cn, ck, alda, clda;
2760faa55883SToby Isaac 
2761faa55883SToby Isaac   PetscFunctionBegin;
27626718818eSStefano Zampini   MatCheckProduct(C,3);
27635f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
27646718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
27655f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscObjectGetComm((PetscObject)A,&comm));
27665f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Comm_size(comm,&size));
27675f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayRead(a->A,&av));
27685f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayRead(b->A,&bv));
27695f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetArrayWrite(c->A,&cv));
27705f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(a->A,&i));
27715f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscBLASIntCast(i,&alda));
27725f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(b->A,&blda));
27735f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseGetLDA(c->A,&i));
27745f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscBLASIntCast(i,&clda));
2775faa55883SToby Isaac   /* copy transpose of B into buf[0] */
2776faa55883SToby Isaac   bn      = B->rmap->n;
2777faa55883SToby Isaac   sendbuf = abt->buf[0];
2778faa55883SToby Isaac   recvbuf = abt->buf[1];
2779faa55883SToby Isaac   for (k = 0, j = 0; j < bn; j++) {
2780faa55883SToby Isaac     for (i = 0; i < cK; i++, k++) {
2781637a0070SStefano Zampini       sendbuf[k] = bv[i * blda + j];
2782faa55883SToby Isaac     }
2783faa55883SToby Isaac   }
27845f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayRead(b->A,&bv));
27855f80ce2aSJacob Faibussowitsch   CHKERRMPI(MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm));
27865f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscBLASIntCast(cK,&ck));
27875f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscBLASIntCast(c->A->rmap->n,&cm));
27885f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscBLASIntCast(c->A->cmap->n,&cn));
278950ce3c9cSStefano Zampini   if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","N",&cm,&cn,&ck,&_DOne,av,&alda,recvbuf,&ck,&_DZero,cv,&clda));
27905f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayRead(a->A,&av));
27915f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayRead(b->A,&bv));
27925f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDenseRestoreArrayWrite(c->A,&cv));
27935f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
27945f80ce2aSJacob Faibussowitsch   CHKERRQ(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2795faa55883SToby Isaac   PetscFunctionReturn(0);
2796faa55883SToby Isaac }
2797faa55883SToby Isaac 
2798faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C)
2799faa55883SToby Isaac {
28006718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2801faa55883SToby Isaac 
2802faa55883SToby Isaac   PetscFunctionBegin;
28036718818eSStefano Zampini   MatCheckProduct(C,3);
28045f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
28056718818eSStefano Zampini   abt = (Mat_MatTransMultDense*)C->product->data;
2806faa55883SToby Isaac   switch (abt->alg) {
2807faa55883SToby Isaac   case 1:
28085f80ce2aSJacob Faibussowitsch     CHKERRQ(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C));
2809faa55883SToby Isaac     break;
2810faa55883SToby Isaac   default:
28115f80ce2aSJacob Faibussowitsch     CHKERRQ(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C));
2812faa55883SToby Isaac     break;
2813faa55883SToby Isaac   }
2814faa55883SToby Isaac   PetscFunctionReturn(0);
2815faa55883SToby Isaac }
2816faa55883SToby Isaac 
28176718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data)
2818320f2790SHong Zhang {
28196718818eSStefano Zampini   Mat_MatMultDense *ab = (Mat_MatMultDense*)data;
2820320f2790SHong Zhang 
2821320f2790SHong Zhang   PetscFunctionBegin;
28225f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDestroy(&ab->Ce));
28235f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDestroy(&ab->Ae));
28245f80ce2aSJacob Faibussowitsch   CHKERRQ(MatDestroy(&ab->Be));
28255f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscFree(ab));
2826320f2790SHong Zhang   PetscFunctionReturn(0);
2827320f2790SHong Zhang }
2828320f2790SHong Zhang 
28295242a7b1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
2830320f2790SHong Zhang PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2831320f2790SHong Zhang {
28326718818eSStefano Zampini   Mat_MatMultDense *ab;
2833320f2790SHong Zhang 
2834320f2790SHong Zhang   PetscFunctionBegin;
28356718818eSStefano Zampini   MatCheckProduct(C,3);
28365f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing product data");
28376718818eSStefano Zampini   ab   = (Mat_MatMultDense*)C->product->data;
28385f80ce2aSJacob Faibussowitsch   CHKERRQ(MatConvert_MPIDense_Elemental(A,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Ae));
28395f80ce2aSJacob Faibussowitsch   CHKERRQ(MatConvert_MPIDense_Elemental(B,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Be));
28405f80ce2aSJacob Faibussowitsch   CHKERRQ(MatMatMultNumeric_Elemental(ab->Ae,ab->Be,ab->Ce));
28415f80ce2aSJacob Faibussowitsch   CHKERRQ(MatConvert(ab->Ce,MATMPIDENSE,MAT_REUSE_MATRIX,&C));
2842320f2790SHong Zhang   PetscFunctionReturn(0);
2843320f2790SHong Zhang }
2844320f2790SHong Zhang 
28456718818eSStefano Zampini static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2846320f2790SHong Zhang {
2847320f2790SHong Zhang   Mat              Ae,Be,Ce;
2848320f2790SHong Zhang   Mat_MatMultDense *ab;
2849320f2790SHong Zhang 
2850320f2790SHong Zhang   PetscFunctionBegin;
28516718818eSStefano Zampini   MatCheckProduct(C,4);
28525f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
28534222ddf1SHong Zhang   /* check local size of A and B */
2854320f2790SHong Zhang   if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend) {
285598921bdaSJacob Faibussowitsch     SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2856320f2790SHong Zhang   }
2857320f2790SHong Zhang 
28584222ddf1SHong Zhang   /* create elemental matrices Ae and Be */
28595f80ce2aSJacob Faibussowitsch   CHKERRQ(MatCreate(PetscObjectComm((PetscObject)A), &Ae));
28605f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetSizes(Ae,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N));
28615f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetType(Ae,MATELEMENTAL));
28625f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetUp(Ae));
28635f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetOption(Ae,MAT_ROW_ORIENTED,PETSC_FALSE));
2864320f2790SHong Zhang 
28655f80ce2aSJacob Faibussowitsch   CHKERRQ(MatCreate(PetscObjectComm((PetscObject)B), &Be));
28665f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetSizes(Be,PETSC_DECIDE,PETSC_DECIDE,B->rmap->N,B->cmap->N));
28675f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetType(Be,MATELEMENTAL));
28685f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetUp(Be));
28695f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetOption(Be,MAT_ROW_ORIENTED,PETSC_FALSE));
2870320f2790SHong Zhang 
28714222ddf1SHong Zhang   /* compute symbolic Ce = Ae*Be */
28725f80ce2aSJacob Faibussowitsch   CHKERRQ(MatCreate(PetscObjectComm((PetscObject)C),&Ce));
28735f80ce2aSJacob Faibussowitsch   CHKERRQ(MatMatMultSymbolic_Elemental(Ae,Be,fill,Ce));
28744222ddf1SHong Zhang 
28754222ddf1SHong Zhang   /* setup C */
28765f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetSizes(C,A->rmap->n,B->cmap->n,PETSC_DECIDE,PETSC_DECIDE));
28775f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetType(C,MATDENSE));
28785f80ce2aSJacob Faibussowitsch   CHKERRQ(MatSetUp(C));
2879320f2790SHong Zhang 
2880320f2790SHong Zhang   /* create data structure for reuse Cdense */
28815f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscNew(&ab));
2882320f2790SHong Zhang   ab->Ae = Ae;
2883320f2790SHong Zhang   ab->Be = Be;
2884320f2790SHong Zhang   ab->Ce = Ce;
28856718818eSStefano Zampini 
28866718818eSStefano Zampini   C->product->data    = ab;
28876718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense;
28884222ddf1SHong Zhang   C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense;
2889320f2790SHong Zhang   PetscFunctionReturn(0);
2890320f2790SHong Zhang }
28914222ddf1SHong Zhang #endif
28924222ddf1SHong Zhang /* ----------------------------------------------- */
28934222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
28944222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C)
2895320f2790SHong Zhang {
2896320f2790SHong Zhang   PetscFunctionBegin;
28974222ddf1SHong Zhang   C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense;
28984222ddf1SHong Zhang   C->ops->productsymbolic = MatProductSymbolic_AB;
2899320f2790SHong Zhang   PetscFunctionReturn(0);
2900320f2790SHong Zhang }
29015242a7b1SHong Zhang #endif
290286aefd0dSHong Zhang 
29034222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C)
29044222ddf1SHong Zhang {
29054222ddf1SHong Zhang   Mat_Product *product = C->product;
29064222ddf1SHong Zhang   Mat         A = product->A,B=product->B;
29074222ddf1SHong Zhang 
29084222ddf1SHong Zhang   PetscFunctionBegin;
29094222ddf1SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend)
291098921bdaSJacob Faibussowitsch     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
29116718818eSStefano Zampini   C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense;
29126718818eSStefano Zampini   C->ops->productsymbolic = MatProductSymbolic_AtB;
29134222ddf1SHong Zhang   PetscFunctionReturn(0);
29144222ddf1SHong Zhang }
29154222ddf1SHong Zhang 
29164222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C)
29174222ddf1SHong Zhang {
29184222ddf1SHong Zhang   PetscErrorCode ierr;
29194222ddf1SHong Zhang   Mat_Product    *product = C->product;
29204222ddf1SHong Zhang   const char     *algTypes[2] = {"allgatherv","cyclic"};
29214222ddf1SHong Zhang   PetscInt       alg,nalg = 2;
29224222ddf1SHong Zhang   PetscBool      flg = PETSC_FALSE;
29234222ddf1SHong Zhang 
29244222ddf1SHong Zhang   PetscFunctionBegin;
29254222ddf1SHong Zhang   /* Set default algorithm */
29264222ddf1SHong Zhang   alg = 0; /* default is allgatherv */
29275f80ce2aSJacob Faibussowitsch   CHKERRQ(PetscStrcmp(product->alg,"default",&flg));
29284222ddf1SHong Zhang   if (flg) {
29295f80ce2aSJacob Faibussowitsch     CHKERRQ(MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]));
29304222ddf1SHong Zhang   }
29314222ddf1SHong Zhang 
29324222ddf1SHong Zhang   /* Get runtime option */
29334222ddf1SHong Zhang   if (product->api_user) {
29344222ddf1SHong Zhang     ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatMatTransposeMult","Mat");CHKERRQ(ierr);
29355f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via","Algorithmic approach","MatMatTransposeMult",algTypes,nalg,algTypes[alg],&alg,&flg));
29364222ddf1SHong Zhang     ierr = PetscOptionsEnd();CHKERRQ(ierr);
29374222ddf1SHong Zhang   } else {
29384222ddf1SHong Zhang     ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatProduct_ABt","Mat");CHKERRQ(ierr);
29395f80ce2aSJacob Faibussowitsch     CHKERRQ(PetscOptionsEList("-mat_product_algorithm","Algorithmic approach","MatProduct_ABt",algTypes,nalg,algTypes[alg],&alg,&flg));
29404222ddf1SHong Zhang     ierr = PetscOptionsEnd();CHKERRQ(ierr);
29414222ddf1SHong Zhang   }
29424222ddf1SHong Zhang   if (flg) {
29435f80ce2aSJacob Faibussowitsch     CHKERRQ(MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]));
29444222ddf1SHong Zhang   }
29454222ddf1SHong Zhang 
29464222ddf1SHong Zhang   C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense;
29474222ddf1SHong Zhang   C->ops->productsymbolic          = MatProductSymbolic_ABt;
29484222ddf1SHong Zhang   PetscFunctionReturn(0);
29494222ddf1SHong Zhang }
29504222ddf1SHong Zhang 
29514222ddf1SHong Zhang PETSC_INTERN PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C)
29524222ddf1SHong Zhang {
29534222ddf1SHong Zhang   Mat_Product    *product = C->product;
29544222ddf1SHong Zhang 
29554222ddf1SHong Zhang   PetscFunctionBegin;
29564222ddf1SHong Zhang   switch (product->type) {
29574222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
29584222ddf1SHong Zhang   case MATPRODUCT_AB:
29595f80ce2aSJacob Faibussowitsch     CHKERRQ(MatProductSetFromOptions_MPIDense_AB(C));
29604222ddf1SHong Zhang     break;
29614222ddf1SHong Zhang #endif
29624222ddf1SHong Zhang   case MATPRODUCT_AtB:
29635f80ce2aSJacob Faibussowitsch     CHKERRQ(MatProductSetFromOptions_MPIDense_AtB(C));
29644222ddf1SHong Zhang     break;
29654222ddf1SHong Zhang   case MATPRODUCT_ABt:
29665f80ce2aSJacob Faibussowitsch     CHKERRQ(MatProductSetFromOptions_MPIDense_ABt(C));
29674222ddf1SHong Zhang     break;
29686718818eSStefano Zampini   default:
29696718818eSStefano Zampini     break;
29704222ddf1SHong Zhang   }
29714222ddf1SHong Zhang   PetscFunctionReturn(0);
29724222ddf1SHong Zhang }
2973