xref: /petsc/src/mat/impls/dense/mpi/mpidense.c (revision 2e956fe4fc852fabc23b437482e1fb7b77fddb0d)
1be1d678aSKris Buschelman 
2ed3cc1f0SBarry Smith /*
3ed3cc1f0SBarry Smith    Basic functions for basic parallel dense matrices.
4ed3cc1f0SBarry Smith */
5ed3cc1f0SBarry Smith 
6c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h>    /*I   "petscmat.h"  I*/
78949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h>
8baa3c1c6SHong Zhang #include <petscblaslapack.h>
98965ea79SLois Curfman McInnes 
10ab92ecdeSBarry Smith /*@
11ab92ecdeSBarry Smith 
12ab92ecdeSBarry Smith       MatDenseGetLocalMatrix - For a MATMPIDENSE or MATSEQDENSE matrix returns the sequential
13ab92ecdeSBarry Smith               matrix that represents the operator. For sequential matrices it returns itself.
14ab92ecdeSBarry Smith 
15ab92ecdeSBarry Smith     Input Parameter:
16ab92ecdeSBarry Smith .      A - the Seq or MPI dense matrix
17ab92ecdeSBarry Smith 
18ab92ecdeSBarry Smith     Output Parameter:
19ab92ecdeSBarry Smith .      B - the inner matrix
20ab92ecdeSBarry Smith 
218e6c10adSSatish Balay     Level: intermediate
228e6c10adSSatish Balay 
23ab92ecdeSBarry Smith @*/
24ab92ecdeSBarry Smith PetscErrorCode MatDenseGetLocalMatrix(Mat A,Mat *B)
25ab92ecdeSBarry Smith {
26ab92ecdeSBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
27ace3abfcSBarry Smith   PetscBool      flg;
28ab92ecdeSBarry Smith 
29ab92ecdeSBarry Smith   PetscFunctionBegin;
30d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
31d5ea218eSStefano Zampini   PetscValidPointer(B,2);
329566063dSJacob Faibussowitsch   PetscCall(PetscObjectBaseTypeCompare((PetscObject)A,MATMPIDENSE,&flg));
332205254eSKarl Rupp   if (flg) *B = mat->A;
34f140bc17SStefano Zampini   else {
359566063dSJacob Faibussowitsch     PetscCall(PetscObjectBaseTypeCompare((PetscObject)A,MATSEQDENSE,&flg));
3628b400f6SJacob Faibussowitsch     PetscCheck(flg,PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Not for matrix type %s",((PetscObject)A)->type_name);
37f140bc17SStefano Zampini     *B = A;
38f140bc17SStefano Zampini   }
39ab92ecdeSBarry Smith   PetscFunctionReturn(0);
40ab92ecdeSBarry Smith }
41ab92ecdeSBarry Smith 
42a76f77c3SStefano Zampini PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s)
43a76f77c3SStefano Zampini {
44a76f77c3SStefano Zampini   Mat_MPIDense   *Amat = (Mat_MPIDense*)A->data;
45a76f77c3SStefano Zampini   Mat_MPIDense   *Bmat = (Mat_MPIDense*)B->data;
46a76f77c3SStefano Zampini 
47a76f77c3SStefano Zampini   PetscFunctionBegin;
489566063dSJacob Faibussowitsch   PetscCall(MatCopy(Amat->A,Bmat->A,s));
49a76f77c3SStefano Zampini   PetscFunctionReturn(0);
50a76f77c3SStefano Zampini }
51a76f77c3SStefano Zampini 
522f605a99SJose E. Roman PetscErrorCode MatShift_MPIDense(Mat A,PetscScalar alpha)
532f605a99SJose E. Roman {
542f605a99SJose E. Roman   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
552f605a99SJose E. Roman   PetscInt       j,lda,rstart = A->rmap->rstart,rend = A->rmap->rend,rend2;
562f605a99SJose E. Roman   PetscScalar    *v;
572f605a99SJose E. Roman 
582f605a99SJose E. Roman   PetscFunctionBegin;
592f605a99SJose E. Roman   PetscCall(MatDenseGetArray(mat->A,&v));
602f605a99SJose E. Roman   PetscCall(MatDenseGetLDA(mat->A,&lda));
612f605a99SJose E. Roman   rend2 = PetscMin(rend,A->cmap->N);
622f605a99SJose E. Roman   if (rend2>rstart) {
632f605a99SJose E. Roman     for (j=rstart; j<rend2; j++) v[j-rstart+j*lda] += alpha;
642f605a99SJose E. Roman     PetscCall(PetscLogFlops(rend2-rstart));
652f605a99SJose E. Roman   }
662f605a99SJose E. Roman   PetscCall(MatDenseRestoreArray(mat->A,&v));
672f605a99SJose E. Roman   PetscFunctionReturn(0);
682f605a99SJose E. Roman }
692f605a99SJose E. Roman 
70ba8c8a56SBarry Smith PetscErrorCode MatGetRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
71ba8c8a56SBarry Smith {
72ba8c8a56SBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
73d0f46423SBarry Smith   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
74ba8c8a56SBarry Smith 
75ba8c8a56SBarry Smith   PetscFunctionBegin;
76aed4548fSBarry Smith   PetscCheck(row >= rstart && row < rend,PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
77ba8c8a56SBarry Smith   lrow = row - rstart;
789566063dSJacob Faibussowitsch   PetscCall(MatGetRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v));
79ba8c8a56SBarry Smith   PetscFunctionReturn(0);
80ba8c8a56SBarry Smith }
81ba8c8a56SBarry Smith 
82637a0070SStefano Zampini PetscErrorCode MatRestoreRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
83ba8c8a56SBarry Smith {
84637a0070SStefano Zampini   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
85637a0070SStefano Zampini   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
86ba8c8a56SBarry Smith 
87ba8c8a56SBarry Smith   PetscFunctionBegin;
88aed4548fSBarry Smith   PetscCheck(row >= rstart && row < rend,PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
89637a0070SStefano Zampini   lrow = row - rstart;
909566063dSJacob Faibussowitsch   PetscCall(MatRestoreRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v));
91ba8c8a56SBarry Smith   PetscFunctionReturn(0);
92ba8c8a56SBarry Smith }
93ba8c8a56SBarry Smith 
9411bd1e4dSLisandro Dalcin PetscErrorCode  MatGetDiagonalBlock_MPIDense(Mat A,Mat *a)
950de54da6SSatish Balay {
960de54da6SSatish Balay   Mat_MPIDense   *mdn = (Mat_MPIDense*)A->data;
97d0f46423SBarry Smith   PetscInt       m = A->rmap->n,rstart = A->rmap->rstart;
9887828ca2SBarry Smith   PetscScalar    *array;
990de54da6SSatish Balay   MPI_Comm       comm;
1004b6ae80fSStefano Zampini   PetscBool      flg;
10111bd1e4dSLisandro Dalcin   Mat            B;
1020de54da6SSatish Balay 
1030de54da6SSatish Balay   PetscFunctionBegin;
1049566063dSJacob Faibussowitsch   PetscCall(MatHasCongruentLayouts(A,&flg));
10528b400f6SJacob Faibussowitsch   PetscCheck(flg,PETSC_COMM_SELF,PETSC_ERR_SUP,"Only square matrices supported.");
1069566063dSJacob Faibussowitsch   PetscCall(PetscObjectQuery((PetscObject)A,"DiagonalBlock",(PetscObject*)&B));
107616b8fbbSStefano Zampini   if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */
1084b6ae80fSStefano Zampini 
1099566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A,MATSEQDENSECUDA,&flg));
11028b400f6SJacob Faibussowitsch     PetscCheck(!flg,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature",MATSEQDENSECUDA);
1119566063dSJacob Faibussowitsch     PetscCall(PetscObjectGetComm((PetscObject)(mdn->A),&comm));
1129566063dSJacob Faibussowitsch     PetscCall(MatCreate(comm,&B));
1139566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B,m,m,m,m));
1149566063dSJacob Faibussowitsch     PetscCall(MatSetType(B,((PetscObject)mdn->A)->type_name));
1159566063dSJacob Faibussowitsch     PetscCall(MatDenseGetArrayRead(mdn->A,(const PetscScalar**)&array));
1169566063dSJacob Faibussowitsch     PetscCall(MatSeqDenseSetPreallocation(B,array+m*rstart));
1179566063dSJacob Faibussowitsch     PetscCall(MatDenseRestoreArrayRead(mdn->A,(const PetscScalar**)&array));
1189566063dSJacob Faibussowitsch     PetscCall(PetscObjectCompose((PetscObject)A,"DiagonalBlock",(PetscObject)B));
11911bd1e4dSLisandro Dalcin     *a   = B;
1209566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&B));
1212205254eSKarl Rupp   } else *a = B;
1220de54da6SSatish Balay   PetscFunctionReturn(0);
1230de54da6SSatish Balay }
1240de54da6SSatish Balay 
12513f74950SBarry Smith PetscErrorCode MatSetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],const PetscScalar v[],InsertMode addv)
1268965ea79SLois Curfman McInnes {
12739b7565bSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)mat->data;
128d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
129ace3abfcSBarry Smith   PetscBool      roworiented = A->roworiented;
1308965ea79SLois Curfman McInnes 
1313a40ed3dSBarry Smith   PetscFunctionBegin;
1328965ea79SLois Curfman McInnes   for (i=0; i<m; i++) {
1335ef9f2a5SBarry Smith     if (idxm[i] < 0) continue;
13408401ef6SPierre Jolivet     PetscCheck(idxm[i] < mat->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
1358965ea79SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
1368965ea79SLois Curfman McInnes       row = idxm[i] - rstart;
13739b7565bSBarry Smith       if (roworiented) {
1389566063dSJacob Faibussowitsch         PetscCall(MatSetValues(A->A,1,&row,n,idxn,v+i*n,addv));
1393a40ed3dSBarry Smith       } else {
1408965ea79SLois Curfman McInnes         for (j=0; j<n; j++) {
1415ef9f2a5SBarry Smith           if (idxn[j] < 0) continue;
14208401ef6SPierre Jolivet           PetscCheck(idxn[j] < mat->cmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
1439566063dSJacob Faibussowitsch           PetscCall(MatSetValues(A->A,1,&row,1,&idxn[j],v+i+j*m,addv));
14439b7565bSBarry Smith         }
1458965ea79SLois Curfman McInnes       }
1462205254eSKarl Rupp     } else if (!A->donotstash) {
1475080c13bSMatthew G Knepley       mat->assembled = PETSC_FALSE;
14839b7565bSBarry Smith       if (roworiented) {
1499566063dSJacob Faibussowitsch         PetscCall(MatStashValuesRow_Private(&mat->stash,idxm[i],n,idxn,v+i*n,PETSC_FALSE));
150d36fbae8SSatish Balay       } else {
1519566063dSJacob Faibussowitsch         PetscCall(MatStashValuesCol_Private(&mat->stash,idxm[i],n,idxn,v+i,m,PETSC_FALSE));
15239b7565bSBarry Smith       }
153b49de8d1SLois Curfman McInnes     }
154b49de8d1SLois Curfman McInnes   }
1553a40ed3dSBarry Smith   PetscFunctionReturn(0);
156b49de8d1SLois Curfman McInnes }
157b49de8d1SLois Curfman McInnes 
15813f74950SBarry Smith PetscErrorCode MatGetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],PetscScalar v[])
159b49de8d1SLois Curfman McInnes {
160b49de8d1SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
161d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
162b49de8d1SLois Curfman McInnes 
1633a40ed3dSBarry Smith   PetscFunctionBegin;
164b49de8d1SLois Curfman McInnes   for (i=0; i<m; i++) {
16554c59aa7SJacob Faibussowitsch     if (idxm[i] < 0) continue; /* negative row */
16654c59aa7SJacob Faibussowitsch     PetscCheck(idxm[i] < mat->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
167b49de8d1SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
168b49de8d1SLois Curfman McInnes       row = idxm[i] - rstart;
169b49de8d1SLois Curfman McInnes       for (j=0; j<n; j++) {
17054c59aa7SJacob Faibussowitsch         if (idxn[j] < 0) continue; /* negative column */
17154c59aa7SJacob Faibussowitsch         PetscCheck(idxn[j] < mat->cmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
1729566063dSJacob Faibussowitsch         PetscCall(MatGetValues(mdn->A,1,&row,1,&idxn[j],v+i*n+j));
173b49de8d1SLois Curfman McInnes       }
174e7e72b3dSBarry Smith     } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only local values currently supported");
1758965ea79SLois Curfman McInnes   }
1763a40ed3dSBarry Smith   PetscFunctionReturn(0);
1778965ea79SLois Curfman McInnes }
1788965ea79SLois Curfman McInnes 
17949a6ff4bSBarry Smith static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A,PetscInt *lda)
18049a6ff4bSBarry Smith {
18149a6ff4bSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
18249a6ff4bSBarry Smith 
18349a6ff4bSBarry Smith   PetscFunctionBegin;
1849566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,lda));
18549a6ff4bSBarry Smith   PetscFunctionReturn(0);
18649a6ff4bSBarry Smith }
18749a6ff4bSBarry Smith 
188ad16ce7aSStefano Zampini static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A,PetscInt lda)
189ad16ce7aSStefano Zampini {
190ad16ce7aSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
19117359960SJose E. Roman   PetscBool      iscuda;
192ad16ce7aSStefano Zampini 
193ad16ce7aSStefano Zampini   PetscFunctionBegin;
19417359960SJose E. Roman   if (!a->A) {
19528b400f6SJacob Faibussowitsch     PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1969566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(A->rmap));
1979566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(A->cmap));
1989566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF,&a->A));
1999566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->A));
2009566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(a->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N));
2019566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda));
2029566063dSJacob Faibussowitsch     PetscCall(MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE));
20317359960SJose E. Roman   }
2049566063dSJacob Faibussowitsch   PetscCall(MatDenseSetLDA(a->A,lda));
205ad16ce7aSStefano Zampini   PetscFunctionReturn(0);
206ad16ce7aSStefano Zampini }
207ad16ce7aSStefano Zampini 
208637a0070SStefano Zampini static PetscErrorCode MatDenseGetArray_MPIDense(Mat A,PetscScalar **array)
209ff14e315SSatish Balay {
210ff14e315SSatish Balay   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
211ff14e315SSatish Balay 
2123a40ed3dSBarry Smith   PetscFunctionBegin;
21328b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2149566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(a->A,array));
2153a40ed3dSBarry Smith   PetscFunctionReturn(0);
216ff14e315SSatish Balay }
217ff14e315SSatish Balay 
218637a0070SStefano Zampini static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A,const PetscScalar **array)
2198572280aSBarry Smith {
2208572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2218572280aSBarry Smith 
2228572280aSBarry Smith   PetscFunctionBegin;
22328b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2249566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,array));
2258572280aSBarry Smith   PetscFunctionReturn(0);
2268572280aSBarry Smith }
2278572280aSBarry Smith 
2286947451fSStefano Zampini static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A,PetscScalar **array)
2296947451fSStefano Zampini {
2306947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2316947451fSStefano Zampini 
2326947451fSStefano Zampini   PetscFunctionBegin;
23328b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2349566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(a->A,array));
2356947451fSStefano Zampini   PetscFunctionReturn(0);
2366947451fSStefano Zampini }
2376947451fSStefano Zampini 
238637a0070SStefano Zampini static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A,const PetscScalar *array)
239d3042a70SBarry Smith {
240d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
241d3042a70SBarry Smith 
242d3042a70SBarry Smith   PetscFunctionBegin;
24328b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
24428b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2459566063dSJacob Faibussowitsch   PetscCall(MatDensePlaceArray(a->A,array));
246d3042a70SBarry Smith   PetscFunctionReturn(0);
247d3042a70SBarry Smith }
248d3042a70SBarry Smith 
249d3042a70SBarry Smith static PetscErrorCode MatDenseResetArray_MPIDense(Mat A)
250d3042a70SBarry Smith {
251d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
252d3042a70SBarry Smith 
253d3042a70SBarry Smith   PetscFunctionBegin;
25428b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
25528b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2569566063dSJacob Faibussowitsch   PetscCall(MatDenseResetArray(a->A));
257d3042a70SBarry Smith   PetscFunctionReturn(0);
258d3042a70SBarry Smith }
259d3042a70SBarry Smith 
260d5ea218eSStefano Zampini static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A,const PetscScalar *array)
261d5ea218eSStefano Zampini {
262d5ea218eSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
263d5ea218eSStefano Zampini 
264d5ea218eSStefano Zampini   PetscFunctionBegin;
26528b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
26628b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2679566063dSJacob Faibussowitsch   PetscCall(MatDenseReplaceArray(a->A,array));
268d5ea218eSStefano Zampini   PetscFunctionReturn(0);
269d5ea218eSStefano Zampini }
270d5ea218eSStefano Zampini 
2717dae84e0SHong Zhang static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B)
272ca3fa75bSLois Curfman McInnes {
273ca3fa75bSLois Curfman McInnes   Mat_MPIDense      *mat  = (Mat_MPIDense*)A->data,*newmatd;
274637a0070SStefano Zampini   PetscInt          lda,i,j,rstart,rend,nrows,ncols,Ncols,nlrows,nlcols;
2755d0c19d7SBarry Smith   const PetscInt    *irow,*icol;
276637a0070SStefano Zampini   const PetscScalar *v;
277637a0070SStefano Zampini   PetscScalar       *bv;
278ca3fa75bSLois Curfman McInnes   Mat               newmat;
2794aa3045dSJed Brown   IS                iscol_local;
28042a884f0SBarry Smith   MPI_Comm          comm_is,comm_mat;
281ca3fa75bSLois Curfman McInnes 
282ca3fa75bSLois Curfman McInnes   PetscFunctionBegin;
2839566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm_mat));
2849566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)iscol,&comm_is));
28508401ef6SPierre Jolivet   PetscCheck(comm_mat == comm_is,PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"IS communicator must match matrix communicator");
28642a884f0SBarry Smith 
2879566063dSJacob Faibussowitsch   PetscCall(ISAllGather(iscol,&iscol_local));
2889566063dSJacob Faibussowitsch   PetscCall(ISGetIndices(isrow,&irow));
2899566063dSJacob Faibussowitsch   PetscCall(ISGetIndices(iscol_local,&icol));
2909566063dSJacob Faibussowitsch   PetscCall(ISGetLocalSize(isrow,&nrows));
2919566063dSJacob Faibussowitsch   PetscCall(ISGetLocalSize(iscol,&ncols));
2929566063dSJacob Faibussowitsch   PetscCall(ISGetSize(iscol,&Ncols)); /* global number of columns, size of iscol_local */
293ca3fa75bSLois Curfman McInnes 
294ca3fa75bSLois Curfman McInnes   /* No parallel redistribution currently supported! Should really check each index set
2957eba5e9cSLois Curfman McInnes      to comfirm that it is OK.  ... Currently supports only submatrix same partitioning as
2967eba5e9cSLois Curfman McInnes      original matrix! */
297ca3fa75bSLois Curfman McInnes 
2989566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(A,&nlrows,&nlcols));
2999566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRange(A,&rstart,&rend));
300ca3fa75bSLois Curfman McInnes 
301ca3fa75bSLois Curfman McInnes   /* Check submatrix call */
302ca3fa75bSLois Curfman McInnes   if (scall == MAT_REUSE_MATRIX) {
303e32f2f54SBarry Smith     /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */
3047eba5e9cSLois Curfman McInnes     /* Really need to test rows and column sizes! */
305ca3fa75bSLois Curfman McInnes     newmat = *B;
306ca3fa75bSLois Curfman McInnes   } else {
307ca3fa75bSLois Curfman McInnes     /* Create and fill new matrix */
3089566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&newmat));
3099566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(newmat,nrows,ncols,PETSC_DECIDE,Ncols));
3109566063dSJacob Faibussowitsch     PetscCall(MatSetType(newmat,((PetscObject)A)->type_name));
3119566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(newmat,NULL));
312ca3fa75bSLois Curfman McInnes   }
313ca3fa75bSLois Curfman McInnes 
314ca3fa75bSLois Curfman McInnes   /* Now extract the data pointers and do the copy, column at a time */
315ca3fa75bSLois Curfman McInnes   newmatd = (Mat_MPIDense*)newmat->data;
3169566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(newmatd->A,&bv));
3179566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(mat->A,&v));
3189566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(mat->A,&lda));
3194aa3045dSJed Brown   for (i=0; i<Ncols; i++) {
320637a0070SStefano Zampini     const PetscScalar *av = v + lda*icol[i];
321ca3fa75bSLois Curfman McInnes     for (j=0; j<nrows; j++) {
3227eba5e9cSLois Curfman McInnes       *bv++ = av[irow[j] - rstart];
323ca3fa75bSLois Curfman McInnes     }
324ca3fa75bSLois Curfman McInnes   }
3259566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(mat->A,&v));
3269566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(newmatd->A,&bv));
327ca3fa75bSLois Curfman McInnes 
328ca3fa75bSLois Curfman McInnes   /* Assemble the matrices so that the correct flags are set */
3299566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(newmat,MAT_FINAL_ASSEMBLY));
3309566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(newmat,MAT_FINAL_ASSEMBLY));
331ca3fa75bSLois Curfman McInnes 
332ca3fa75bSLois Curfman McInnes   /* Free work space */
3339566063dSJacob Faibussowitsch   PetscCall(ISRestoreIndices(isrow,&irow));
3349566063dSJacob Faibussowitsch   PetscCall(ISRestoreIndices(iscol_local,&icol));
3359566063dSJacob Faibussowitsch   PetscCall(ISDestroy(&iscol_local));
336ca3fa75bSLois Curfman McInnes   *B   = newmat;
337ca3fa75bSLois Curfman McInnes   PetscFunctionReturn(0);
338ca3fa75bSLois Curfman McInnes }
339ca3fa75bSLois Curfman McInnes 
340637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A,PetscScalar **array)
341ff14e315SSatish Balay {
34273a71a0fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
34373a71a0fSBarry Smith 
3443a40ed3dSBarry Smith   PetscFunctionBegin;
3459566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(a->A,array));
3463a40ed3dSBarry Smith   PetscFunctionReturn(0);
347ff14e315SSatish Balay }
348ff14e315SSatish Balay 
349637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A,const PetscScalar **array)
3508572280aSBarry Smith {
3518572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3528572280aSBarry Smith 
3538572280aSBarry Smith   PetscFunctionBegin;
3549566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,array));
3558572280aSBarry Smith   PetscFunctionReturn(0);
3568572280aSBarry Smith }
3578572280aSBarry Smith 
3586947451fSStefano Zampini PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A,PetscScalar **array)
3596947451fSStefano Zampini {
3606947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3616947451fSStefano Zampini 
3626947451fSStefano Zampini   PetscFunctionBegin;
3639566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(a->A,array));
3646947451fSStefano Zampini   PetscFunctionReturn(0);
3656947451fSStefano Zampini }
3666947451fSStefano Zampini 
367dfbe8321SBarry Smith PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat,MatAssemblyType mode)
3688965ea79SLois Curfman McInnes {
36939ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
37013f74950SBarry Smith   PetscInt       nstash,reallocs;
3718965ea79SLois Curfman McInnes 
3723a40ed3dSBarry Smith   PetscFunctionBegin;
3734067683fSStefano Zampini   if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(0);
3748965ea79SLois Curfman McInnes 
3759566063dSJacob Faibussowitsch   PetscCall(MatStashScatterBegin_Private(mat,&mat->stash,mat->rmap->range));
3769566063dSJacob Faibussowitsch   PetscCall(MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs));
3779566063dSJacob Faibussowitsch   PetscCall(PetscInfo(mdn->A,"Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n",nstash,reallocs));
3783a40ed3dSBarry Smith   PetscFunctionReturn(0);
3798965ea79SLois Curfman McInnes }
3808965ea79SLois Curfman McInnes 
381dfbe8321SBarry Smith PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat,MatAssemblyType mode)
3828965ea79SLois Curfman McInnes {
38339ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn=(Mat_MPIDense*)mat->data;
38413f74950SBarry Smith   PetscInt       i,*row,*col,flg,j,rstart,ncols;
38513f74950SBarry Smith   PetscMPIInt    n;
38687828ca2SBarry Smith   PetscScalar    *val;
3878965ea79SLois Curfman McInnes 
3883a40ed3dSBarry Smith   PetscFunctionBegin;
389910cf402Sprj-   if (!mdn->donotstash && !mat->nooffprocentries) {
3908965ea79SLois Curfman McInnes     /*  wait on receives */
3917ef1d9bdSSatish Balay     while (1) {
3929566063dSJacob Faibussowitsch       PetscCall(MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg));
3937ef1d9bdSSatish Balay       if (!flg) break;
3948965ea79SLois Curfman McInnes 
3957ef1d9bdSSatish Balay       for (i=0; i<n;) {
3967ef1d9bdSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
3972205254eSKarl Rupp         for (j=i,rstart=row[j]; j<n; j++) {
3982205254eSKarl Rupp           if (row[j] != rstart) break;
3992205254eSKarl Rupp         }
4007ef1d9bdSSatish Balay         if (j < n) ncols = j-i;
4017ef1d9bdSSatish Balay         else       ncols = n-i;
4027ef1d9bdSSatish Balay         /* Now assemble all these values with a single function call */
4039566063dSJacob Faibussowitsch         PetscCall(MatSetValues_MPIDense(mat,1,row+i,ncols,col+i,val+i,mat->insertmode));
4047ef1d9bdSSatish Balay         i    = j;
4058965ea79SLois Curfman McInnes       }
4067ef1d9bdSSatish Balay     }
4079566063dSJacob Faibussowitsch     PetscCall(MatStashScatterEnd_Private(&mat->stash));
408910cf402Sprj-   }
4098965ea79SLois Curfman McInnes 
4109566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(mdn->A,mode));
4119566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(mdn->A,mode));
4123a40ed3dSBarry Smith   PetscFunctionReturn(0);
4138965ea79SLois Curfman McInnes }
4148965ea79SLois Curfman McInnes 
415dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_MPIDense(Mat A)
4168965ea79SLois Curfman McInnes {
41739ddd567SLois Curfman McInnes   Mat_MPIDense   *l = (Mat_MPIDense*)A->data;
4183a40ed3dSBarry Smith 
4193a40ed3dSBarry Smith   PetscFunctionBegin;
4209566063dSJacob Faibussowitsch   PetscCall(MatZeroEntries(l->A));
4213a40ed3dSBarry Smith   PetscFunctionReturn(0);
4228965ea79SLois Curfman McInnes }
4238965ea79SLois Curfman McInnes 
424637a0070SStefano Zampini PetscErrorCode MatZeroRows_MPIDense(Mat A,PetscInt n,const PetscInt rows[],PetscScalar diag,Vec x,Vec b)
4258965ea79SLois Curfman McInnes {
42639ddd567SLois Curfman McInnes   Mat_MPIDense      *l = (Mat_MPIDense*)A->data;
427637a0070SStefano Zampini   PetscInt          i,len,*lrows;
428637a0070SStefano Zampini 
429637a0070SStefano Zampini   PetscFunctionBegin;
430637a0070SStefano Zampini   /* get locally owned rows */
4319566063dSJacob Faibussowitsch   PetscCall(PetscLayoutMapLocal(A->rmap,n,rows,&len,&lrows,NULL));
432637a0070SStefano Zampini   /* fix right hand side if needed */
433637a0070SStefano Zampini   if (x && b) {
43497b48c8fSBarry Smith     const PetscScalar *xx;
43597b48c8fSBarry Smith     PetscScalar       *bb;
4368965ea79SLois Curfman McInnes 
4379566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(x, &xx));
4389566063dSJacob Faibussowitsch     PetscCall(VecGetArrayWrite(b, &bb));
439637a0070SStefano Zampini     for (i=0;i<len;++i) bb[lrows[i]] = diag*xx[lrows[i]];
4409566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(x, &xx));
4419566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayWrite(b, &bb));
44297b48c8fSBarry Smith   }
4439566063dSJacob Faibussowitsch   PetscCall(MatZeroRows(l->A,len,lrows,0.0,NULL,NULL));
444e2eb51b1SBarry Smith   if (diag != 0.0) {
445637a0070SStefano Zampini     Vec d;
446b9679d65SBarry Smith 
4479566063dSJacob Faibussowitsch     PetscCall(MatCreateVecs(A,NULL,&d));
4489566063dSJacob Faibussowitsch     PetscCall(VecSet(d,diag));
4499566063dSJacob Faibussowitsch     PetscCall(MatDiagonalSet(A,d,INSERT_VALUES));
4509566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&d));
451b9679d65SBarry Smith   }
4529566063dSJacob Faibussowitsch   PetscCall(PetscFree(lrows));
4533a40ed3dSBarry Smith   PetscFunctionReturn(0);
4548965ea79SLois Curfman McInnes }
4558965ea79SLois Curfman McInnes 
456cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat,Vec,Vec);
457cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat,Vec,Vec,Vec);
458cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat,Vec,Vec);
459cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat,Vec,Vec,Vec);
460cc2e6a90SBarry Smith 
461dfbe8321SBarry Smith PetscErrorCode MatMult_MPIDense(Mat mat,Vec xx,Vec yy)
4628965ea79SLois Curfman McInnes {
46339ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
464637a0070SStefano Zampini   const PetscScalar *ax;
465637a0070SStefano Zampini   PetscScalar       *ay;
466d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
467c456f294SBarry Smith 
4683a40ed3dSBarry Smith   PetscFunctionBegin;
4696f08ad05SPierre Jolivet   if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
4709566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(xx,&ax,&axmtype));
4719566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype));
4729566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE));
4739566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE));
4749566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(mdn->lvec,&ay));
4759566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(xx,&ax));
4769566063dSJacob Faibussowitsch   PetscCall((*mdn->A->ops->mult)(mdn->A,mdn->lvec,yy));
4773a40ed3dSBarry Smith   PetscFunctionReturn(0);
4788965ea79SLois Curfman McInnes }
4798965ea79SLois Curfman McInnes 
480dfbe8321SBarry Smith PetscErrorCode MatMultAdd_MPIDense(Mat mat,Vec xx,Vec yy,Vec zz)
4818965ea79SLois Curfman McInnes {
48239ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
483637a0070SStefano Zampini   const PetscScalar *ax;
484637a0070SStefano Zampini   PetscScalar       *ay;
485d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
486c456f294SBarry Smith 
4873a40ed3dSBarry Smith   PetscFunctionBegin;
4886f08ad05SPierre Jolivet   if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
4899566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(xx,&ax,&axmtype));
4909566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype));
4919566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE));
4929566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE));
4939566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(mdn->lvec,&ay));
4949566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(xx,&ax));
4959566063dSJacob Faibussowitsch   PetscCall((*mdn->A->ops->multadd)(mdn->A,mdn->lvec,yy,zz));
4963a40ed3dSBarry Smith   PetscFunctionReturn(0);
4978965ea79SLois Curfman McInnes }
4988965ea79SLois Curfman McInnes 
499dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_MPIDense(Mat A,Vec xx,Vec yy)
500096963f5SLois Curfman McInnes {
501096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
502637a0070SStefano Zampini   const PetscScalar *ax;
503637a0070SStefano Zampini   PetscScalar       *ay;
504d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
505096963f5SLois Curfman McInnes 
5063a40ed3dSBarry Smith   PetscFunctionBegin;
5076f08ad05SPierre Jolivet   if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
5089566063dSJacob Faibussowitsch   PetscCall(VecSet(yy,0.0));
5099566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->multtranspose)(a->A,xx,a->lvec));
5109566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype));
5119566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(yy,&ay,&aymtype));
5129566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM));
5139566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM));
5149566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(a->lvec,&ax));
5159566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(yy,&ay));
5163a40ed3dSBarry Smith   PetscFunctionReturn(0);
517096963f5SLois Curfman McInnes }
518096963f5SLois Curfman McInnes 
519dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A,Vec xx,Vec yy,Vec zz)
520096963f5SLois Curfman McInnes {
521096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
522637a0070SStefano Zampini   const PetscScalar *ax;
523637a0070SStefano Zampini   PetscScalar       *ay;
524d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
525096963f5SLois Curfman McInnes 
5263a40ed3dSBarry Smith   PetscFunctionBegin;
5276f08ad05SPierre Jolivet   if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
5289566063dSJacob Faibussowitsch   PetscCall(VecCopy(yy,zz));
5299566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->multtranspose)(a->A,xx,a->lvec));
5309566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype));
5319566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(zz,&ay,&aymtype));
5329566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM));
5339566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM));
5349566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(a->lvec,&ax));
5359566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(zz,&ay));
5363a40ed3dSBarry Smith   PetscFunctionReturn(0);
537096963f5SLois Curfman McInnes }
538096963f5SLois Curfman McInnes 
539dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_MPIDense(Mat A,Vec v)
5408965ea79SLois Curfman McInnes {
54139ddd567SLois Curfman McInnes   Mat_MPIDense      *a    = (Mat_MPIDense*)A->data;
542637a0070SStefano Zampini   PetscInt          lda,len,i,n,m = A->rmap->n,radd;
54387828ca2SBarry Smith   PetscScalar       *x,zero = 0.0;
544637a0070SStefano Zampini   const PetscScalar *av;
545ed3cc1f0SBarry Smith 
5463a40ed3dSBarry Smith   PetscFunctionBegin;
5479566063dSJacob Faibussowitsch   PetscCall(VecSet(v,zero));
5489566063dSJacob Faibussowitsch   PetscCall(VecGetArray(v,&x));
5499566063dSJacob Faibussowitsch   PetscCall(VecGetSize(v,&n));
55008401ef6SPierre Jolivet   PetscCheck(n == A->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Nonconforming mat and vec");
551d0f46423SBarry Smith   len  = PetscMin(a->A->rmap->n,a->A->cmap->n);
552d0f46423SBarry Smith   radd = A->rmap->rstart*m;
5539566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&av));
5549566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
55544cd7ae7SLois Curfman McInnes   for (i=0; i<len; i++) {
556637a0070SStefano Zampini     x[i] = av[radd + i*lda + i];
557096963f5SLois Curfman McInnes   }
5589566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&av));
5599566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(v,&x));
5603a40ed3dSBarry Smith   PetscFunctionReturn(0);
5618965ea79SLois Curfman McInnes }
5628965ea79SLois Curfman McInnes 
563dfbe8321SBarry Smith PetscErrorCode MatDestroy_MPIDense(Mat mat)
5648965ea79SLois Curfman McInnes {
5653501a2bdSLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
566ed3cc1f0SBarry Smith 
5673a40ed3dSBarry Smith   PetscFunctionBegin;
568aa482453SBarry Smith #if defined(PETSC_USE_LOG)
569c0aa6a63SJacob Faibussowitsch   PetscLogObjectState((PetscObject)mat,"Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT,mat->rmap->N,mat->cmap->N);
5708965ea79SLois Curfman McInnes #endif
5719566063dSJacob Faibussowitsch   PetscCall(MatStashDestroy_Private(&mat->stash));
57228b400f6SJacob Faibussowitsch   PetscCheck(!mdn->vecinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
57328b400f6SJacob Faibussowitsch   PetscCheck(!mdn->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
5749566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&mdn->A));
5759566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&mdn->lvec));
5769566063dSJacob Faibussowitsch   PetscCall(PetscSFDestroy(&mdn->Mvctx));
5779566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&mdn->cvec));
5789566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&mdn->cmat));
57901b82886SBarry Smith 
5809566063dSJacob Faibussowitsch   PetscCall(PetscFree(mat->data));
5819566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)mat,NULL));
5828baccfbdSHong Zhang 
5839566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",NULL));
5849566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",NULL));
5859566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",NULL));
5869566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",NULL));
5879566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",NULL));
5889566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",NULL));
5899566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",NULL));
5909566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",NULL));
5919566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",NULL));
5929566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",NULL));
5939566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",NULL));
5949566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpiaij_mpidense_C",NULL));
5959566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpiaij_C",NULL));
5968baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
5979566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",NULL));
5988baccfbdSHong Zhang #endif
599d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
6009566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",NULL));
601d24d4204SJose E. Roman #endif
6029566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",NULL));
6039566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",NULL));
6049566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",NULL));
6056718818eSStefano Zampini #if defined (PETSC_HAVE_CUDA)
6069566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",NULL));
6079566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",NULL));
608*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpidensecuda_C",NULL));
609*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidensecuda_mpidense_C",NULL));
610*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",NULL));
611*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",NULL));
612*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",NULL));
613*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",NULL));
614*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseCUDAGetArray_C",NULL));
615*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseCUDAGetArrayRead_C",NULL));
616*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseCUDAGetArrayWrite_C",NULL));
617*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseCUDARestoreArray_C",NULL));
618*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseCUDARestoreArrayRead_C",NULL));
619*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseCUDARestoreArrayWrite_C",NULL));
620*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseCUDAPlaceArray_C",NULL));
621*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseCUDAResetArray_C",NULL));
622*2e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseCUDAReplaceArray_C",NULL));
6236718818eSStefano Zampini #endif
6249566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",NULL));
6259566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",NULL));
6269566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",NULL));
6279566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",NULL));
6289566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",NULL));
6299566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",NULL));
6309566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",NULL));
6319566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",NULL));
6329566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",NULL));
6339566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",NULL));
634f8103e6bSStefano Zampini 
635f8103e6bSStefano Zampini   PetscCall(PetscObjectCompose((PetscObject)mat,"DiagonalBlock",NULL));
6363a40ed3dSBarry Smith   PetscFunctionReturn(0);
6378965ea79SLois Curfman McInnes }
63839ddd567SLois Curfman McInnes 
63952c5f739Sprj- PETSC_INTERN PetscErrorCode MatView_SeqDense(Mat,PetscViewer);
64052c5f739Sprj- 
6419804daf3SBarry Smith #include <petscdraw.h>
6426849ba73SBarry Smith static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
6438965ea79SLois Curfman McInnes {
64439ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
645616b8fbbSStefano Zampini   PetscMPIInt       rank;
64619fd82e9SBarry Smith   PetscViewerType   vtype;
647ace3abfcSBarry Smith   PetscBool         iascii,isdraw;
648b0a32e0cSBarry Smith   PetscViewer       sviewer;
649f3ef73ceSBarry Smith   PetscViewerFormat format;
6508965ea79SLois Curfman McInnes 
6513a40ed3dSBarry Smith   PetscFunctionBegin;
6529566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat),&rank));
6539566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii));
6549566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw));
65532077d6dSBarry Smith   if (iascii) {
6569566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetType(viewer,&vtype));
6579566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetFormat(viewer,&format));
658456192e2SBarry Smith     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
6594e220ebcSLois Curfman McInnes       MatInfo info;
6609566063dSJacob Faibussowitsch       PetscCall(MatGetInfo(mat,MAT_LOCAL,&info));
6619566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPushSynchronized(viewer));
6629566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIISynchronizedPrintf(viewer,"  [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n",rank,mat->rmap->n,(PetscInt)info.nz_used,(PetscInt)info.nz_allocated,(PetscInt)info.memory));
6639566063dSJacob Faibussowitsch       PetscCall(PetscViewerFlush(viewer));
6649566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPopSynchronized(viewer));
6656f08ad05SPierre Jolivet       if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx,viewer));
6663a40ed3dSBarry Smith       PetscFunctionReturn(0);
667fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
6683a40ed3dSBarry Smith       PetscFunctionReturn(0);
6698965ea79SLois Curfman McInnes     }
670f1af5d2fSBarry Smith   } else if (isdraw) {
671b0a32e0cSBarry Smith     PetscDraw draw;
672ace3abfcSBarry Smith     PetscBool isnull;
673f1af5d2fSBarry Smith 
6749566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawGetDraw(viewer,0,&draw));
6759566063dSJacob Faibussowitsch     PetscCall(PetscDrawIsNull(draw,&isnull));
676f1af5d2fSBarry Smith     if (isnull) PetscFunctionReturn(0);
677f1af5d2fSBarry Smith   }
67877ed5343SBarry Smith 
6797da1fb6eSBarry Smith   {
6808965ea79SLois Curfman McInnes     /* assemble the entire matrix onto first processor. */
6818965ea79SLois Curfman McInnes     Mat         A;
682d0f46423SBarry Smith     PetscInt    M = mat->rmap->N,N = mat->cmap->N,m,row,i,nz;
683ba8c8a56SBarry Smith     PetscInt    *cols;
684ba8c8a56SBarry Smith     PetscScalar *vals;
6858965ea79SLois Curfman McInnes 
6869566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)mat),&A));
687dd400576SPatrick Sanan     if (rank == 0) {
6889566063dSJacob Faibussowitsch       PetscCall(MatSetSizes(A,M,N,M,N));
6893a40ed3dSBarry Smith     } else {
6909566063dSJacob Faibussowitsch       PetscCall(MatSetSizes(A,0,0,M,N));
6918965ea79SLois Curfman McInnes     }
6927adad957SLisandro Dalcin     /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */
6939566063dSJacob Faibussowitsch     PetscCall(MatSetType(A,MATMPIDENSE));
6949566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(A,NULL));
6959566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)mat,(PetscObject)A));
6968965ea79SLois Curfman McInnes 
69739ddd567SLois Curfman McInnes     /* Copy the matrix ... This isn't the most efficient means,
69839ddd567SLois Curfman McInnes        but it's quick for now */
69951022da4SBarry Smith     A->insertmode = INSERT_VALUES;
7002205254eSKarl Rupp 
7012205254eSKarl Rupp     row = mat->rmap->rstart;
7022205254eSKarl Rupp     m   = mdn->A->rmap->n;
7038965ea79SLois Curfman McInnes     for (i=0; i<m; i++) {
7049566063dSJacob Faibussowitsch       PetscCall(MatGetRow_MPIDense(mat,row,&nz,&cols,&vals));
7059566063dSJacob Faibussowitsch       PetscCall(MatSetValues_MPIDense(A,1,&row,nz,cols,vals,INSERT_VALUES));
7069566063dSJacob Faibussowitsch       PetscCall(MatRestoreRow_MPIDense(mat,row,&nz,&cols,&vals));
70739ddd567SLois Curfman McInnes       row++;
7088965ea79SLois Curfman McInnes     }
7098965ea79SLois Curfman McInnes 
7109566063dSJacob Faibussowitsch     PetscCall(MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY));
7119566063dSJacob Faibussowitsch     PetscCall(MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY));
7129566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetSubViewer(viewer,PETSC_COMM_SELF,&sviewer));
713dd400576SPatrick Sanan     if (rank == 0) {
7149566063dSJacob Faibussowitsch       PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense*)(A->data))->A,((PetscObject)mat)->name));
7159566063dSJacob Faibussowitsch       PetscCall(MatView_SeqDense(((Mat_MPIDense*)(A->data))->A,sviewer));
7168965ea79SLois Curfman McInnes     }
7179566063dSJacob Faibussowitsch     PetscCall(PetscViewerRestoreSubViewer(viewer,PETSC_COMM_SELF,&sviewer));
7189566063dSJacob Faibussowitsch     PetscCall(PetscViewerFlush(viewer));
7199566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&A));
7208965ea79SLois Curfman McInnes   }
7213a40ed3dSBarry Smith   PetscFunctionReturn(0);
7228965ea79SLois Curfman McInnes }
7238965ea79SLois Curfman McInnes 
724dfbe8321SBarry Smith PetscErrorCode MatView_MPIDense(Mat mat,PetscViewer viewer)
7258965ea79SLois Curfman McInnes {
726ace3abfcSBarry Smith   PetscBool      iascii,isbinary,isdraw,issocket;
7278965ea79SLois Curfman McInnes 
728433994e6SBarry Smith   PetscFunctionBegin;
7299566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii));
7309566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary));
7319566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERSOCKET,&issocket));
7329566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw));
7330f5bd95cSBarry Smith 
73432077d6dSBarry Smith   if (iascii || issocket || isdraw) {
7359566063dSJacob Faibussowitsch     PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat,viewer));
7360f5bd95cSBarry Smith   } else if (isbinary) {
7379566063dSJacob Faibussowitsch     PetscCall(MatView_Dense_Binary(mat,viewer));
73811aeaf0aSBarry Smith   }
7393a40ed3dSBarry Smith   PetscFunctionReturn(0);
7408965ea79SLois Curfman McInnes }
7418965ea79SLois Curfman McInnes 
742dfbe8321SBarry Smith PetscErrorCode MatGetInfo_MPIDense(Mat A,MatInfoType flag,MatInfo *info)
7438965ea79SLois Curfman McInnes {
7443501a2bdSLois Curfman McInnes   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
7453501a2bdSLois Curfman McInnes   Mat            mdn  = mat->A;
7463966268fSBarry Smith   PetscLogDouble isend[5],irecv[5];
7478965ea79SLois Curfman McInnes 
7483a40ed3dSBarry Smith   PetscFunctionBegin;
7494e220ebcSLois Curfman McInnes   info->block_size = 1.0;
7502205254eSKarl Rupp 
7519566063dSJacob Faibussowitsch   PetscCall(MatGetInfo(mdn,MAT_LOCAL,info));
7522205254eSKarl Rupp 
7534e220ebcSLois Curfman McInnes   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
7544e220ebcSLois Curfman McInnes   isend[3] = info->memory;  isend[4] = info->mallocs;
7558965ea79SLois Curfman McInnes   if (flag == MAT_LOCAL) {
7564e220ebcSLois Curfman McInnes     info->nz_used      = isend[0];
7574e220ebcSLois Curfman McInnes     info->nz_allocated = isend[1];
7584e220ebcSLois Curfman McInnes     info->nz_unneeded  = isend[2];
7594e220ebcSLois Curfman McInnes     info->memory       = isend[3];
7604e220ebcSLois Curfman McInnes     info->mallocs      = isend[4];
7618965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_MAX) {
7621c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_MAX,PetscObjectComm((PetscObject)A)));
7632205254eSKarl Rupp 
7644e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7654e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7664e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7674e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7684e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7698965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_SUM) {
7701c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_SUM,PetscObjectComm((PetscObject)A)));
7712205254eSKarl Rupp 
7724e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7734e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7744e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7754e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7764e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7778965ea79SLois Curfman McInnes   }
7784e220ebcSLois Curfman McInnes   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
7794e220ebcSLois Curfman McInnes   info->fill_ratio_needed = 0;
7804e220ebcSLois Curfman McInnes   info->factor_mallocs    = 0;
7813a40ed3dSBarry Smith   PetscFunctionReturn(0);
7828965ea79SLois Curfman McInnes }
7838965ea79SLois Curfman McInnes 
784ace3abfcSBarry Smith PetscErrorCode MatSetOption_MPIDense(Mat A,MatOption op,PetscBool flg)
7858965ea79SLois Curfman McInnes {
78639ddd567SLois Curfman McInnes   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
7878965ea79SLois Curfman McInnes 
7883a40ed3dSBarry Smith   PetscFunctionBegin;
78912c028f9SKris Buschelman   switch (op) {
790512a5fc5SBarry Smith   case MAT_NEW_NONZERO_LOCATIONS:
79112c028f9SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
79212c028f9SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
79343674050SBarry Smith     MatCheckPreallocated(A,1);
7949566063dSJacob Faibussowitsch     PetscCall(MatSetOption(a->A,op,flg));
79512c028f9SKris Buschelman     break;
79612c028f9SKris Buschelman   case MAT_ROW_ORIENTED:
79743674050SBarry Smith     MatCheckPreallocated(A,1);
7984e0d8c25SBarry Smith     a->roworiented = flg;
7999566063dSJacob Faibussowitsch     PetscCall(MatSetOption(a->A,op,flg));
80012c028f9SKris Buschelman     break;
8018c78258cSHong Zhang   case MAT_FORCE_DIAGONAL_ENTRIES:
80213fa8e87SLisandro Dalcin   case MAT_KEEP_NONZERO_PATTERN:
80312c028f9SKris Buschelman   case MAT_USE_HASH_TABLE:
804071fcb05SBarry Smith   case MAT_SORTED_FULL:
8059566063dSJacob Faibussowitsch     PetscCall(PetscInfo(A,"Option %s ignored\n",MatOptions[op]));
80612c028f9SKris Buschelman     break;
80712c028f9SKris Buschelman   case MAT_IGNORE_OFF_PROC_ENTRIES:
8084e0d8c25SBarry Smith     a->donotstash = flg;
80912c028f9SKris Buschelman     break;
81077e54ba9SKris Buschelman   case MAT_SYMMETRIC:
81177e54ba9SKris Buschelman   case MAT_STRUCTURALLY_SYMMETRIC:
8129a4540c5SBarry Smith   case MAT_HERMITIAN:
8139a4540c5SBarry Smith   case MAT_SYMMETRY_ETERNAL:
814600fe468SBarry Smith   case MAT_IGNORE_LOWER_TRIANGULAR:
8155d7aebe8SStefano Zampini   case MAT_IGNORE_ZERO_ENTRIES:
8169566063dSJacob Faibussowitsch     PetscCall(PetscInfo(A,"Option %s ignored\n",MatOptions[op]));
81777e54ba9SKris Buschelman     break;
81812c028f9SKris Buschelman   default:
81998921bdaSJacob Faibussowitsch     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"unknown option %s",MatOptions[op]);
8203a40ed3dSBarry Smith   }
8213a40ed3dSBarry Smith   PetscFunctionReturn(0);
8228965ea79SLois Curfman McInnes }
8238965ea79SLois Curfman McInnes 
824dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_MPIDense(Mat A,Vec ll,Vec rr)
8255b2fa520SLois Curfman McInnes {
8265b2fa520SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
827637a0070SStefano Zampini   const PetscScalar *l;
828637a0070SStefano Zampini   PetscScalar       x,*v,*vv,*r;
829637a0070SStefano Zampini   PetscInt          i,j,s2a,s3a,s2,s3,m=mdn->A->rmap->n,n=mdn->A->cmap->n,lda;
8305b2fa520SLois Curfman McInnes 
8315b2fa520SLois Curfman McInnes   PetscFunctionBegin;
8329566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(mdn->A,&vv));
8339566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(mdn->A,&lda));
8349566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(A,&s2,&s3));
8355b2fa520SLois Curfman McInnes   if (ll) {
8369566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(ll,&s2a));
83708401ef6SPierre Jolivet     PetscCheck(s2a == s2,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2);
8389566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(ll,&l));
8395b2fa520SLois Curfman McInnes     for (i=0; i<m; i++) {
8405b2fa520SLois Curfman McInnes       x = l[i];
841637a0070SStefano Zampini       v = vv + i;
842637a0070SStefano Zampini       for (j=0; j<n; j++) { (*v) *= x; v+= lda;}
8435b2fa520SLois Curfman McInnes     }
8449566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(ll,&l));
8459566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(1.0*n*m));
8465b2fa520SLois Curfman McInnes   }
8475b2fa520SLois Curfman McInnes   if (rr) {
848637a0070SStefano Zampini     const PetscScalar *ar;
849637a0070SStefano Zampini 
8509566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(rr,&s3a));
85108401ef6SPierre Jolivet     PetscCheck(s3a == s3,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3);
8529566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(rr,&ar));
8536f08ad05SPierre Jolivet     if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
8549566063dSJacob Faibussowitsch     PetscCall(VecGetArray(mdn->lvec,&r));
8559566063dSJacob Faibussowitsch     PetscCall(PetscSFBcastBegin(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE));
8569566063dSJacob Faibussowitsch     PetscCall(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE));
8579566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(rr,&ar));
8585b2fa520SLois Curfman McInnes     for (i=0; i<n; i++) {
8595b2fa520SLois Curfman McInnes       x = r[i];
860637a0070SStefano Zampini       v = vv + i*lda;
8612205254eSKarl Rupp       for (j=0; j<m; j++) (*v++) *= x;
8625b2fa520SLois Curfman McInnes     }
8639566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(mdn->lvec,&r));
8649566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(1.0*n*m));
8655b2fa520SLois Curfman McInnes   }
8669566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(mdn->A,&vv));
8675b2fa520SLois Curfman McInnes   PetscFunctionReturn(0);
8685b2fa520SLois Curfman McInnes }
8695b2fa520SLois Curfman McInnes 
870dfbe8321SBarry Smith PetscErrorCode MatNorm_MPIDense(Mat A,NormType type,PetscReal *nrm)
871096963f5SLois Curfman McInnes {
8723501a2bdSLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
87313f74950SBarry Smith   PetscInt          i,j;
874616b8fbbSStefano Zampini   PetscMPIInt       size;
875329f5518SBarry Smith   PetscReal         sum = 0.0;
876637a0070SStefano Zampini   const PetscScalar *av,*v;
8773501a2bdSLois Curfman McInnes 
8783a40ed3dSBarry Smith   PetscFunctionBegin;
8799566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(mdn->A,&av));
880637a0070SStefano Zampini   v    = av;
8819566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A),&size));
882616b8fbbSStefano Zampini   if (size == 1) {
8839566063dSJacob Faibussowitsch     PetscCall(MatNorm(mdn->A,type,nrm));
8843501a2bdSLois Curfman McInnes   } else {
8853501a2bdSLois Curfman McInnes     if (type == NORM_FROBENIUS) {
886d0f46423SBarry Smith       for (i=0; i<mdn->A->cmap->n*mdn->A->rmap->n; i++) {
887329f5518SBarry Smith         sum += PetscRealPart(PetscConj(*v)*(*v)); v++;
8883501a2bdSLois Curfman McInnes       }
8891c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(&sum,nrm,1,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A)));
8908f1a2a5eSBarry Smith       *nrm = PetscSqrtReal(*nrm);
8919566063dSJacob Faibussowitsch       PetscCall(PetscLogFlops(2.0*mdn->A->cmap->n*mdn->A->rmap->n));
8923a40ed3dSBarry Smith     } else if (type == NORM_1) {
893329f5518SBarry Smith       PetscReal *tmp,*tmp2;
8949566063dSJacob Faibussowitsch       PetscCall(PetscCalloc2(A->cmap->N,&tmp,A->cmap->N,&tmp2));
895064f8208SBarry Smith       *nrm = 0.0;
896637a0070SStefano Zampini       v    = av;
897d0f46423SBarry Smith       for (j=0; j<mdn->A->cmap->n; j++) {
898d0f46423SBarry Smith         for (i=0; i<mdn->A->rmap->n; i++) {
89967e560aaSBarry Smith           tmp[j] += PetscAbsScalar(*v);  v++;
9003501a2bdSLois Curfman McInnes         }
9013501a2bdSLois Curfman McInnes       }
9021c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(tmp,tmp2,A->cmap->N,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A)));
903d0f46423SBarry Smith       for (j=0; j<A->cmap->N; j++) {
904064f8208SBarry Smith         if (tmp2[j] > *nrm) *nrm = tmp2[j];
9053501a2bdSLois Curfman McInnes       }
9069566063dSJacob Faibussowitsch       PetscCall(PetscFree2(tmp,tmp2));
9079566063dSJacob Faibussowitsch       PetscCall(PetscLogFlops(A->cmap->n*A->rmap->n));
9083a40ed3dSBarry Smith     } else if (type == NORM_INFINITY) { /* max row norm */
909329f5518SBarry Smith       PetscReal ntemp;
9109566063dSJacob Faibussowitsch       PetscCall(MatNorm(mdn->A,type,&ntemp));
9111c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(&ntemp,nrm,1,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)A)));
912ce94432eSBarry Smith     } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for two norm");
9133501a2bdSLois Curfman McInnes   }
9149566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(mdn->A,&av));
9153a40ed3dSBarry Smith   PetscFunctionReturn(0);
9163501a2bdSLois Curfman McInnes }
9173501a2bdSLois Curfman McInnes 
918fc4dec0aSBarry Smith PetscErrorCode MatTranspose_MPIDense(Mat A,MatReuse reuse,Mat *matout)
9193501a2bdSLois Curfman McInnes {
9203501a2bdSLois Curfman McInnes   Mat_MPIDense   *a    = (Mat_MPIDense*)A->data;
9213501a2bdSLois Curfman McInnes   Mat            B;
922d0f46423SBarry Smith   PetscInt       M = A->rmap->N,N = A->cmap->N,m,n,*rwork,rstart = A->rmap->rstart;
923637a0070SStefano Zampini   PetscInt       j,i,lda;
92487828ca2SBarry Smith   PetscScalar    *v;
9253501a2bdSLois Curfman McInnes 
9263a40ed3dSBarry Smith   PetscFunctionBegin;
927cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) {
9289566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&B));
9299566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B,A->cmap->n,A->rmap->n,N,M));
9309566063dSJacob Faibussowitsch     PetscCall(MatSetType(B,((PetscObject)A)->type_name));
9319566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(B,NULL));
932637a0070SStefano Zampini   } else B = *matout;
9333501a2bdSLois Curfman McInnes 
934637a0070SStefano Zampini   m    = a->A->rmap->n; n = a->A->cmap->n;
9359566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,(const PetscScalar**)&v));
9369566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
9379566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(m,&rwork));
9383501a2bdSLois Curfman McInnes   for (i=0; i<m; i++) rwork[i] = rstart + i;
9391acff37aSSatish Balay   for (j=0; j<n; j++) {
9409566063dSJacob Faibussowitsch     PetscCall(MatSetValues(B,1,&j,m,rwork,v,INSERT_VALUES));
941637a0070SStefano Zampini     v   += lda;
9423501a2bdSLois Curfman McInnes   }
9439566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,(const PetscScalar**)&v));
9449566063dSJacob Faibussowitsch   PetscCall(PetscFree(rwork));
9459566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY));
9469566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY));
947cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) {
9483501a2bdSLois Curfman McInnes     *matout = B;
9493501a2bdSLois Curfman McInnes   } else {
9509566063dSJacob Faibussowitsch     PetscCall(MatHeaderMerge(A,&B));
9513501a2bdSLois Curfman McInnes   }
9523a40ed3dSBarry Smith   PetscFunctionReturn(0);
953096963f5SLois Curfman McInnes }
954096963f5SLois Curfman McInnes 
9556849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat,MatDuplicateOption,Mat*);
95652c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat,PetscScalar);
9578965ea79SLois Curfman McInnes 
9584994cf47SJed Brown PetscErrorCode MatSetUp_MPIDense(Mat A)
959273d9f13SBarry Smith {
960273d9f13SBarry Smith   PetscFunctionBegin;
9619566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->rmap));
9629566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->cmap));
96318992e5dSStefano Zampini   if (!A->preallocated) {
9649566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(A,NULL));
96518992e5dSStefano Zampini   }
966273d9f13SBarry Smith   PetscFunctionReturn(0);
967273d9f13SBarry Smith }
968273d9f13SBarry Smith 
969488007eeSBarry Smith PetscErrorCode MatAXPY_MPIDense(Mat Y,PetscScalar alpha,Mat X,MatStructure str)
970488007eeSBarry Smith {
971488007eeSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)Y->data, *B = (Mat_MPIDense*)X->data;
972488007eeSBarry Smith 
973488007eeSBarry Smith   PetscFunctionBegin;
9749566063dSJacob Faibussowitsch   PetscCall(MatAXPY(A->A,alpha,B->A,str));
975488007eeSBarry Smith   PetscFunctionReturn(0);
976488007eeSBarry Smith }
977488007eeSBarry Smith 
9787087cfbeSBarry Smith PetscErrorCode MatConjugate_MPIDense(Mat mat)
979ba337c44SJed Brown {
980ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
981ba337c44SJed Brown 
982ba337c44SJed Brown   PetscFunctionBegin;
9839566063dSJacob Faibussowitsch   PetscCall(MatConjugate(a->A));
984ba337c44SJed Brown   PetscFunctionReturn(0);
985ba337c44SJed Brown }
986ba337c44SJed Brown 
987ba337c44SJed Brown PetscErrorCode MatRealPart_MPIDense(Mat A)
988ba337c44SJed Brown {
989ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
990ba337c44SJed Brown 
991ba337c44SJed Brown   PetscFunctionBegin;
9929566063dSJacob Faibussowitsch   PetscCall(MatRealPart(a->A));
993ba337c44SJed Brown   PetscFunctionReturn(0);
994ba337c44SJed Brown }
995ba337c44SJed Brown 
996ba337c44SJed Brown PetscErrorCode MatImaginaryPart_MPIDense(Mat A)
997ba337c44SJed Brown {
998ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
999ba337c44SJed Brown 
1000ba337c44SJed Brown   PetscFunctionBegin;
10019566063dSJacob Faibussowitsch   PetscCall(MatImaginaryPart(a->A));
1002ba337c44SJed Brown   PetscFunctionReturn(0);
1003ba337c44SJed Brown }
1004ba337c44SJed Brown 
100549a6ff4bSBarry Smith static PetscErrorCode MatGetColumnVector_MPIDense(Mat A,Vec v,PetscInt col)
100649a6ff4bSBarry Smith {
1007637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
100849a6ff4bSBarry Smith 
100949a6ff4bSBarry Smith   PetscFunctionBegin;
101028b400f6SJacob Faibussowitsch   PetscCheck(a->A,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing local matrix");
101128b400f6SJacob Faibussowitsch   PetscCheck(a->A->ops->getcolumnvector,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing get column operation");
10129566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->getcolumnvector)(a->A,v,col));
101349a6ff4bSBarry Smith   PetscFunctionReturn(0);
101449a6ff4bSBarry Smith }
101549a6ff4bSBarry Smith 
1016857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat,PetscInt,PetscReal*);
101752c5f739Sprj- 
1018857cbf51SRichard Tran Mills PetscErrorCode MatGetColumnReductions_MPIDense(Mat A,PetscInt type,PetscReal *reductions)
10190716a85fSBarry Smith {
1020a873a8cdSSam Reynolds   PetscInt       i,m,n;
10210716a85fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
10220716a85fSBarry Smith   PetscReal      *work;
10230716a85fSBarry Smith 
10240716a85fSBarry Smith   PetscFunctionBegin;
10259566063dSJacob Faibussowitsch   PetscCall(MatGetSize(A,&m,&n));
10269566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(n,&work));
1027857cbf51SRichard Tran Mills   if (type == REDUCTION_MEAN_REALPART) {
10289566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A,(PetscInt)REDUCTION_SUM_REALPART,work));
1029857cbf51SRichard Tran Mills   } else if (type == REDUCTION_MEAN_IMAGINARYPART) {
10309566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A,(PetscInt)REDUCTION_SUM_IMAGINARYPART,work));
1031a873a8cdSSam Reynolds   } else {
10329566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A,type,work));
1033a873a8cdSSam Reynolds   }
1034857cbf51SRichard Tran Mills   if (type == NORM_2) {
10350716a85fSBarry Smith     for (i=0; i<n; i++) work[i] *= work[i];
10360716a85fSBarry Smith   }
1037857cbf51SRichard Tran Mills   if (type == NORM_INFINITY) {
10381c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(work,reductions,n,MPIU_REAL,MPIU_MAX,A->hdr.comm));
10390716a85fSBarry Smith   } else {
10401c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(work,reductions,n,MPIU_REAL,MPIU_SUM,A->hdr.comm));
10410716a85fSBarry Smith   }
10429566063dSJacob Faibussowitsch   PetscCall(PetscFree(work));
1043857cbf51SRichard Tran Mills   if (type == NORM_2) {
1044a873a8cdSSam Reynolds     for (i=0; i<n; i++) reductions[i] = PetscSqrtReal(reductions[i]);
1045857cbf51SRichard Tran Mills   } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) {
1046a873a8cdSSam Reynolds     for (i=0; i<n; i++) reductions[i] /= m;
10470716a85fSBarry Smith   }
10480716a85fSBarry Smith   PetscFunctionReturn(0);
10490716a85fSBarry Smith }
10500716a85fSBarry Smith 
1051637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1052126e4e93SJose E. Roman PetscErrorCode MatShift_MPIDenseCUDA(Mat A,PetscScalar alpha)
1053126e4e93SJose E. Roman {
1054126e4e93SJose E. Roman   PetscScalar *da;
1055126e4e93SJose E. Roman   PetscInt    lda;
1056126e4e93SJose E. Roman 
1057126e4e93SJose E. Roman   PetscFunctionBegin;
1058126e4e93SJose E. Roman   PetscCall(MatDenseCUDAGetArray(A,&da));
1059126e4e93SJose E. Roman   PetscCall(MatDenseGetLDA(A,&lda));
1060126e4e93SJose E. Roman   PetscCall(PetscInfo(A,"Performing Shift on backend\n"));
1061126e4e93SJose E. Roman   PetscCall(MatShift_DenseCUDA_Private(da,alpha,lda,A->rmap->rstart,A->rmap->rend,A->cmap->N));
1062126e4e93SJose E. Roman   PetscCall(MatDenseCUDARestoreArray(A,&da));
1063126e4e93SJose E. Roman   PetscFunctionReturn(0);
1064126e4e93SJose E. Roman }
1065126e4e93SJose E. Roman 
10666947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10676947451fSStefano Zampini {
10686947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10696947451fSStefano Zampini   PetscInt       lda;
10706947451fSStefano Zampini 
10716947451fSStefano Zampini   PetscFunctionBegin;
107228b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
107328b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10746947451fSStefano Zampini   if (!a->cvec) {
10759566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
10769566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
10776947451fSStefano Zampini   }
10786947451fSStefano Zampini   a->vecinuse = col + 1;
10799566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
10809566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArray(a->A,(PetscScalar**)&a->ptrinuse));
10819566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
10826947451fSStefano Zampini   *v   = a->cvec;
10836947451fSStefano Zampini   PetscFunctionReturn(0);
10846947451fSStefano Zampini }
10856947451fSStefano Zampini 
10866947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10876947451fSStefano Zampini {
10886947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10896947451fSStefano Zampini 
10906947451fSStefano Zampini   PetscFunctionBegin;
109128b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
109228b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
10936947451fSStefano Zampini   a->vecinuse = 0;
10949566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArray(a->A,(PetscScalar**)&a->ptrinuse));
10959566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
10966947451fSStefano Zampini   *v   = NULL;
10976947451fSStefano Zampini   PetscFunctionReturn(0);
10986947451fSStefano Zampini }
10996947451fSStefano Zampini 
11006947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11016947451fSStefano Zampini {
11026947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11036947451fSStefano Zampini   PetscInt       lda;
11046947451fSStefano Zampini 
11056947451fSStefano Zampini   PetscFunctionBegin;
110628b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
110728b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11086947451fSStefano Zampini   if (!a->cvec) {
11099566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
11109566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
11116947451fSStefano Zampini   }
11126947451fSStefano Zampini   a->vecinuse = col + 1;
11139566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
11149566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayRead(a->A,&a->ptrinuse));
11159566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
11169566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(a->cvec));
11176947451fSStefano Zampini   *v   = a->cvec;
11186947451fSStefano Zampini   PetscFunctionReturn(0);
11196947451fSStefano Zampini }
11206947451fSStefano Zampini 
11216947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11226947451fSStefano Zampini {
11236947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11246947451fSStefano Zampini 
11256947451fSStefano Zampini   PetscFunctionBegin;
112628b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
112728b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
11286947451fSStefano Zampini   a->vecinuse = 0;
11299566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayRead(a->A,&a->ptrinuse));
11309566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(a->cvec));
11319566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
11326947451fSStefano Zampini   *v   = NULL;
11336947451fSStefano Zampini   PetscFunctionReturn(0);
11346947451fSStefano Zampini }
11356947451fSStefano Zampini 
11366947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11376947451fSStefano Zampini {
11386947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11396947451fSStefano Zampini   PetscInt       lda;
11406947451fSStefano Zampini 
11416947451fSStefano Zampini   PetscFunctionBegin;
114228b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
114328b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11446947451fSStefano Zampini   if (!a->cvec) {
11459566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
11469566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
11476947451fSStefano Zampini   }
11486947451fSStefano Zampini   a->vecinuse = col + 1;
11499566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
11509566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
11519566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
11526947451fSStefano Zampini   *v   = a->cvec;
11536947451fSStefano Zampini   PetscFunctionReturn(0);
11546947451fSStefano Zampini }
11556947451fSStefano Zampini 
11566947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11576947451fSStefano Zampini {
11586947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11596947451fSStefano Zampini 
11606947451fSStefano Zampini   PetscFunctionBegin;
116128b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
116228b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
11636947451fSStefano Zampini   a->vecinuse = 0;
11649566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
11659566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
11666947451fSStefano Zampini   *v   = NULL;
11676947451fSStefano Zampini   PetscFunctionReturn(0);
11686947451fSStefano Zampini }
11696947451fSStefano Zampini 
1170637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAPlaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1171637a0070SStefano Zampini {
1172637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1173637a0070SStefano Zampini 
1174637a0070SStefano Zampini   PetscFunctionBegin;
117528b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
117628b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11779566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAPlaceArray(l->A,a));
1178637a0070SStefano Zampini   PetscFunctionReturn(0);
1179637a0070SStefano Zampini }
1180637a0070SStefano Zampini 
1181637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAResetArray_MPIDenseCUDA(Mat A)
1182637a0070SStefano Zampini {
1183637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1184637a0070SStefano Zampini 
1185637a0070SStefano Zampini   PetscFunctionBegin;
118628b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
118728b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11889566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAResetArray(l->A));
1189637a0070SStefano Zampini   PetscFunctionReturn(0);
1190637a0070SStefano Zampini }
1191637a0070SStefano Zampini 
1192d5ea218eSStefano Zampini static PetscErrorCode MatDenseCUDAReplaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1193d5ea218eSStefano Zampini {
1194d5ea218eSStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1195d5ea218eSStefano Zampini 
1196d5ea218eSStefano Zampini   PetscFunctionBegin;
119728b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
119828b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11999566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAReplaceArray(l->A,a));
1200d5ea218eSStefano Zampini   PetscFunctionReturn(0);
1201d5ea218eSStefano Zampini }
1202d5ea218eSStefano Zampini 
1203637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1204637a0070SStefano Zampini {
1205637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1206637a0070SStefano Zampini 
1207637a0070SStefano Zampini   PetscFunctionBegin;
12089566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayWrite(l->A,a));
1209637a0070SStefano Zampini   PetscFunctionReturn(0);
1210637a0070SStefano Zampini }
1211637a0070SStefano Zampini 
1212637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1213637a0070SStefano Zampini {
1214637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1215637a0070SStefano Zampini 
1216637a0070SStefano Zampini   PetscFunctionBegin;
12179566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayWrite(l->A,a));
1218637a0070SStefano Zampini   PetscFunctionReturn(0);
1219637a0070SStefano Zampini }
1220637a0070SStefano Zampini 
1221637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1222637a0070SStefano Zampini {
1223637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1224637a0070SStefano Zampini 
1225637a0070SStefano Zampini   PetscFunctionBegin;
12269566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayRead(l->A,a));
1227637a0070SStefano Zampini   PetscFunctionReturn(0);
1228637a0070SStefano Zampini }
1229637a0070SStefano Zampini 
1230637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1231637a0070SStefano Zampini {
1232637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1233637a0070SStefano Zampini 
1234637a0070SStefano Zampini   PetscFunctionBegin;
12359566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayRead(l->A,a));
1236637a0070SStefano Zampini   PetscFunctionReturn(0);
1237637a0070SStefano Zampini }
1238637a0070SStefano Zampini 
1239637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1240637a0070SStefano Zampini {
1241637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1242637a0070SStefano Zampini 
1243637a0070SStefano Zampini   PetscFunctionBegin;
12449566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArray(l->A,a));
1245637a0070SStefano Zampini   PetscFunctionReturn(0);
1246637a0070SStefano Zampini }
1247637a0070SStefano Zampini 
1248637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1249637a0070SStefano Zampini {
1250637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1251637a0070SStefano Zampini 
1252637a0070SStefano Zampini   PetscFunctionBegin;
12539566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArray(l->A,a));
1254637a0070SStefano Zampini   PetscFunctionReturn(0);
1255637a0070SStefano Zampini }
1256637a0070SStefano Zampini 
12576947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12586947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12596947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat,PetscInt,Vec*);
12606947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12616947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12626947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat,PetscInt,Vec*);
12635ea7661aSPierre Jolivet static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat,Mat*);
12646947451fSStefano Zampini 
1265637a0070SStefano Zampini static PetscErrorCode MatBindToCPU_MPIDenseCUDA(Mat mat,PetscBool bind)
1266637a0070SStefano Zampini {
1267637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)mat->data;
1268637a0070SStefano Zampini 
1269637a0070SStefano Zampini   PetscFunctionBegin;
127028b400f6SJacob Faibussowitsch   PetscCheck(!d->vecinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
127128b400f6SJacob Faibussowitsch   PetscCheck(!d->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1272637a0070SStefano Zampini   if (d->A) {
12739566063dSJacob Faibussowitsch     PetscCall(MatBindToCPU(d->A,bind));
1274637a0070SStefano Zampini   }
1275637a0070SStefano Zampini   mat->boundtocpu = bind;
12766947451fSStefano Zampini   if (!bind) {
12776947451fSStefano Zampini     PetscBool iscuda;
12786947451fSStefano Zampini 
12799566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)d->cvec,VECMPICUDA,&iscuda));
12806947451fSStefano Zampini     if (!iscuda) {
12819566063dSJacob Faibussowitsch       PetscCall(VecDestroy(&d->cvec));
1282616b8fbbSStefano Zampini     }
12839566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)d->cmat,MATMPIDENSECUDA,&iscuda));
1284616b8fbbSStefano Zampini     if (!iscuda) {
12859566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&d->cmat));
12866947451fSStefano Zampini     }
12879566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDenseCUDA));
12889566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDenseCUDA));
12899566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDenseCUDA));
12909566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDenseCUDA));
12919566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDenseCUDA));
12929566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDenseCUDA));
1293126e4e93SJose E. Roman     mat->ops->shift                   = MatShift_MPIDenseCUDA;
12946947451fSStefano Zampini   } else {
12959566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense));
12969566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense));
12979566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense));
12989566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense));
12999566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense));
13009566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense));
1301126e4e93SJose E. Roman     mat->ops->shift                   = MatShift_MPIDense;
1302616b8fbbSStefano Zampini   }
1303616b8fbbSStefano Zampini   if (d->cmat) {
13049566063dSJacob Faibussowitsch     PetscCall(MatBindToCPU(d->cmat,bind));
13056947451fSStefano Zampini   }
1306637a0070SStefano Zampini   PetscFunctionReturn(0);
1307637a0070SStefano Zampini }
1308637a0070SStefano Zampini 
1309637a0070SStefano Zampini PetscErrorCode MatMPIDenseCUDASetPreallocation(Mat A, PetscScalar *d_data)
1310637a0070SStefano Zampini {
1311637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)A->data;
1312637a0070SStefano Zampini   PetscBool      iscuda;
1313637a0070SStefano Zampini 
1314637a0070SStefano Zampini   PetscFunctionBegin;
1315d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
13169566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda));
1317637a0070SStefano Zampini   if (!iscuda) PetscFunctionReturn(0);
13189566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->rmap));
13199566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->cmap));
1320637a0070SStefano Zampini   if (!d->A) {
13219566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF,&d->A));
13229566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)d->A));
13239566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(d->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N));
1324637a0070SStefano Zampini   }
13259566063dSJacob Faibussowitsch   PetscCall(MatSetType(d->A,MATSEQDENSECUDA));
13269566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseCUDASetPreallocation(d->A,d_data));
1327637a0070SStefano Zampini   A->preallocated = PETSC_TRUE;
13286f08ad05SPierre Jolivet   A->assembled = PETSC_TRUE;
1329637a0070SStefano Zampini   PetscFunctionReturn(0);
1330637a0070SStefano Zampini }
1331637a0070SStefano Zampini #endif
1332637a0070SStefano Zampini 
133373a71a0fSBarry Smith static PetscErrorCode MatSetRandom_MPIDense(Mat x,PetscRandom rctx)
133473a71a0fSBarry Smith {
133573a71a0fSBarry Smith   Mat_MPIDense   *d = (Mat_MPIDense*)x->data;
133673a71a0fSBarry Smith 
133773a71a0fSBarry Smith   PetscFunctionBegin;
13389566063dSJacob Faibussowitsch   PetscCall(MatSetRandom(d->A,rctx));
133973a71a0fSBarry Smith   PetscFunctionReturn(0);
134073a71a0fSBarry Smith }
134173a71a0fSBarry Smith 
13423b49f96aSBarry Smith static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A,PetscBool  *missing,PetscInt *d)
13433b49f96aSBarry Smith {
13443b49f96aSBarry Smith   PetscFunctionBegin;
13453b49f96aSBarry Smith   *missing = PETSC_FALSE;
13463b49f96aSBarry Smith   PetscFunctionReturn(0);
13473b49f96aSBarry Smith }
13483b49f96aSBarry Smith 
13494222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1350cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13516718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1352a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13536718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat,Mat,PetscBool*);
13546718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat,PetscViewer);
1355cc48ffa7SToby Isaac 
13568965ea79SLois Curfman McInnes /* -------------------------------------------------------------------*/
135709dc0095SBarry Smith static struct _MatOps MatOps_Values = { MatSetValues_MPIDense,
135809dc0095SBarry Smith                                         MatGetRow_MPIDense,
135909dc0095SBarry Smith                                         MatRestoreRow_MPIDense,
136009dc0095SBarry Smith                                         MatMult_MPIDense,
136197304618SKris Buschelman                                 /*  4*/ MatMultAdd_MPIDense,
13627c922b88SBarry Smith                                         MatMultTranspose_MPIDense,
13637c922b88SBarry Smith                                         MatMultTransposeAdd_MPIDense,
1364f4259b30SLisandro Dalcin                                         NULL,
1365f4259b30SLisandro Dalcin                                         NULL,
1366f4259b30SLisandro Dalcin                                         NULL,
1367f4259b30SLisandro Dalcin                                 /* 10*/ NULL,
1368f4259b30SLisandro Dalcin                                         NULL,
1369f4259b30SLisandro Dalcin                                         NULL,
1370f4259b30SLisandro Dalcin                                         NULL,
137109dc0095SBarry Smith                                         MatTranspose_MPIDense,
137297304618SKris Buschelman                                 /* 15*/ MatGetInfo_MPIDense,
13736e4ee0c6SHong Zhang                                         MatEqual_MPIDense,
137409dc0095SBarry Smith                                         MatGetDiagonal_MPIDense,
13755b2fa520SLois Curfman McInnes                                         MatDiagonalScale_MPIDense,
137609dc0095SBarry Smith                                         MatNorm_MPIDense,
137797304618SKris Buschelman                                 /* 20*/ MatAssemblyBegin_MPIDense,
137809dc0095SBarry Smith                                         MatAssemblyEnd_MPIDense,
137909dc0095SBarry Smith                                         MatSetOption_MPIDense,
138009dc0095SBarry Smith                                         MatZeroEntries_MPIDense,
1381d519adbfSMatthew Knepley                                 /* 24*/ MatZeroRows_MPIDense,
1382f4259b30SLisandro Dalcin                                         NULL,
1383f4259b30SLisandro Dalcin                                         NULL,
1384f4259b30SLisandro Dalcin                                         NULL,
1385f4259b30SLisandro Dalcin                                         NULL,
13864994cf47SJed Brown                                 /* 29*/ MatSetUp_MPIDense,
1387f4259b30SLisandro Dalcin                                         NULL,
1388f4259b30SLisandro Dalcin                                         NULL,
1389c56a70eeSBarry Smith                                         MatGetDiagonalBlock_MPIDense,
1390f4259b30SLisandro Dalcin                                         NULL,
1391d519adbfSMatthew Knepley                                 /* 34*/ MatDuplicate_MPIDense,
1392f4259b30SLisandro Dalcin                                         NULL,
1393f4259b30SLisandro Dalcin                                         NULL,
1394f4259b30SLisandro Dalcin                                         NULL,
1395f4259b30SLisandro Dalcin                                         NULL,
1396d519adbfSMatthew Knepley                                 /* 39*/ MatAXPY_MPIDense,
13977dae84e0SHong Zhang                                         MatCreateSubMatrices_MPIDense,
1398f4259b30SLisandro Dalcin                                         NULL,
139909dc0095SBarry Smith                                         MatGetValues_MPIDense,
1400a76f77c3SStefano Zampini                                         MatCopy_MPIDense,
1401f4259b30SLisandro Dalcin                                 /* 44*/ NULL,
140209dc0095SBarry Smith                                         MatScale_MPIDense,
14032f605a99SJose E. Roman                                         MatShift_MPIDense,
1404f4259b30SLisandro Dalcin                                         NULL,
1405f4259b30SLisandro Dalcin                                         NULL,
140673a71a0fSBarry Smith                                 /* 49*/ MatSetRandom_MPIDense,
1407f4259b30SLisandro Dalcin                                         NULL,
1408f4259b30SLisandro Dalcin                                         NULL,
1409f4259b30SLisandro Dalcin                                         NULL,
1410f4259b30SLisandro Dalcin                                         NULL,
1411f4259b30SLisandro Dalcin                                 /* 54*/ NULL,
1412f4259b30SLisandro Dalcin                                         NULL,
1413f4259b30SLisandro Dalcin                                         NULL,
1414f4259b30SLisandro Dalcin                                         NULL,
1415f4259b30SLisandro Dalcin                                         NULL,
14167dae84e0SHong Zhang                                 /* 59*/ MatCreateSubMatrix_MPIDense,
1417b9b97703SBarry Smith                                         MatDestroy_MPIDense,
1418b9b97703SBarry Smith                                         MatView_MPIDense,
1419f4259b30SLisandro Dalcin                                         NULL,
1420f4259b30SLisandro Dalcin                                         NULL,
1421f4259b30SLisandro Dalcin                                 /* 64*/ NULL,
1422f4259b30SLisandro Dalcin                                         NULL,
1423f4259b30SLisandro Dalcin                                         NULL,
1424f4259b30SLisandro Dalcin                                         NULL,
1425f4259b30SLisandro Dalcin                                         NULL,
1426f4259b30SLisandro Dalcin                                 /* 69*/ NULL,
1427f4259b30SLisandro Dalcin                                         NULL,
1428f4259b30SLisandro Dalcin                                         NULL,
1429f4259b30SLisandro Dalcin                                         NULL,
1430f4259b30SLisandro Dalcin                                         NULL,
1431f4259b30SLisandro Dalcin                                 /* 74*/ NULL,
1432f4259b30SLisandro Dalcin                                         NULL,
1433f4259b30SLisandro Dalcin                                         NULL,
1434f4259b30SLisandro Dalcin                                         NULL,
1435f4259b30SLisandro Dalcin                                         NULL,
1436f4259b30SLisandro Dalcin                                 /* 79*/ NULL,
1437f4259b30SLisandro Dalcin                                         NULL,
1438f4259b30SLisandro Dalcin                                         NULL,
1439f4259b30SLisandro Dalcin                                         NULL,
14405bba2384SShri Abhyankar                                 /* 83*/ MatLoad_MPIDense,
1441f4259b30SLisandro Dalcin                                         NULL,
1442f4259b30SLisandro Dalcin                                         NULL,
1443f4259b30SLisandro Dalcin                                         NULL,
1444f4259b30SLisandro Dalcin                                         NULL,
1445f4259b30SLisandro Dalcin                                         NULL,
1446f4259b30SLisandro Dalcin                                 /* 89*/ NULL,
1447f4259b30SLisandro Dalcin                                         NULL,
1448f4259b30SLisandro Dalcin                                         NULL,
1449f4259b30SLisandro Dalcin                                         NULL,
1450f4259b30SLisandro Dalcin                                         NULL,
1451f4259b30SLisandro Dalcin                                 /* 94*/ NULL,
1452f4259b30SLisandro Dalcin                                         NULL,
14536718818eSStefano Zampini                                         MatMatTransposeMultSymbolic_MPIDense_MPIDense,
1454cc48ffa7SToby Isaac                                         MatMatTransposeMultNumeric_MPIDense_MPIDense,
1455f4259b30SLisandro Dalcin                                         NULL,
14564222ddf1SHong Zhang                                 /* 99*/ MatProductSetFromOptions_MPIDense,
1457f4259b30SLisandro Dalcin                                         NULL,
1458f4259b30SLisandro Dalcin                                         NULL,
1459ba337c44SJed Brown                                         MatConjugate_MPIDense,
1460f4259b30SLisandro Dalcin                                         NULL,
1461f4259b30SLisandro Dalcin                                 /*104*/ NULL,
1462ba337c44SJed Brown                                         MatRealPart_MPIDense,
1463ba337c44SJed Brown                                         MatImaginaryPart_MPIDense,
1464f4259b30SLisandro Dalcin                                         NULL,
1465f4259b30SLisandro Dalcin                                         NULL,
1466f4259b30SLisandro Dalcin                                 /*109*/ NULL,
1467f4259b30SLisandro Dalcin                                         NULL,
1468f4259b30SLisandro Dalcin                                         NULL,
146949a6ff4bSBarry Smith                                         MatGetColumnVector_MPIDense,
14703b49f96aSBarry Smith                                         MatMissingDiagonal_MPIDense,
1471f4259b30SLisandro Dalcin                                 /*114*/ NULL,
1472f4259b30SLisandro Dalcin                                         NULL,
1473f4259b30SLisandro Dalcin                                         NULL,
1474f4259b30SLisandro Dalcin                                         NULL,
1475f4259b30SLisandro Dalcin                                         NULL,
1476f4259b30SLisandro Dalcin                                 /*119*/ NULL,
1477f4259b30SLisandro Dalcin                                         NULL,
1478f4259b30SLisandro Dalcin                                         NULL,
1479f4259b30SLisandro Dalcin                                         NULL,
1480f4259b30SLisandro Dalcin                                         NULL,
1481f4259b30SLisandro Dalcin                                 /*124*/ NULL,
1482a873a8cdSSam Reynolds                                         MatGetColumnReductions_MPIDense,
1483f4259b30SLisandro Dalcin                                         NULL,
1484f4259b30SLisandro Dalcin                                         NULL,
1485f4259b30SLisandro Dalcin                                         NULL,
1486f4259b30SLisandro Dalcin                                 /*129*/ NULL,
1487f4259b30SLisandro Dalcin                                         NULL,
14886718818eSStefano Zampini                                         MatTransposeMatMultSymbolic_MPIDense_MPIDense,
1489cb20be35SHong Zhang                                         MatTransposeMatMultNumeric_MPIDense_MPIDense,
1490f4259b30SLisandro Dalcin                                         NULL,
1491f4259b30SLisandro Dalcin                                 /*134*/ NULL,
1492f4259b30SLisandro Dalcin                                         NULL,
1493f4259b30SLisandro Dalcin                                         NULL,
1494f4259b30SLisandro Dalcin                                         NULL,
1495f4259b30SLisandro Dalcin                                         NULL,
1496f4259b30SLisandro Dalcin                                 /*139*/ NULL,
1497f4259b30SLisandro Dalcin                                         NULL,
1498f4259b30SLisandro Dalcin                                         NULL,
1499f4259b30SLisandro Dalcin                                         NULL,
1500f4259b30SLisandro Dalcin                                         NULL,
15014222ddf1SHong Zhang                                         MatCreateMPIMatConcatenateSeqMat_MPIDense,
1502f4259b30SLisandro Dalcin                                 /*145*/ NULL,
1503f4259b30SLisandro Dalcin                                         NULL,
1504f4259b30SLisandro Dalcin                                         NULL
1505ba337c44SJed Brown };
15068965ea79SLois Curfman McInnes 
15077087cfbeSBarry Smith PetscErrorCode  MatMPIDenseSetPreallocation_MPIDense(Mat mat,PetscScalar *data)
1508a23d5eceSKris Buschelman {
1509637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
1510637a0070SStefano Zampini   PetscBool      iscuda;
1511a23d5eceSKris Buschelman 
1512a23d5eceSKris Buschelman   PetscFunctionBegin;
151328b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
15149566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(mat->rmap));
15159566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(mat->cmap));
1516637a0070SStefano Zampini   if (!a->A) {
15179566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF,&a->A));
15189566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A));
15199566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(a->A,mat->rmap->n,mat->cmap->N,mat->rmap->n,mat->cmap->N));
1520637a0070SStefano Zampini   }
15219566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)mat,MATMPIDENSECUDA,&iscuda));
15229566063dSJacob Faibussowitsch   PetscCall(MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE));
15239566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseSetPreallocation(a->A,data));
1524637a0070SStefano Zampini   mat->preallocated = PETSC_TRUE;
15256f08ad05SPierre Jolivet   mat->assembled = PETSC_TRUE;
1526a23d5eceSKris Buschelman   PetscFunctionReturn(0);
1527a23d5eceSKris Buschelman }
1528a23d5eceSKris Buschelman 
15294e29119aSPierre Jolivet PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15304e29119aSPierre Jolivet {
15314e29119aSPierre Jolivet   Mat            B,C;
15324e29119aSPierre Jolivet 
15334e29119aSPierre Jolivet   PetscFunctionBegin;
15349566063dSJacob Faibussowitsch   PetscCall(MatMPIAIJGetLocalMat(A,MAT_INITIAL_MATRIX,&C));
15359566063dSJacob Faibussowitsch   PetscCall(MatConvert_SeqAIJ_SeqDense(C,MATSEQDENSE,MAT_INITIAL_MATRIX,&B));
15369566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&C));
15374e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
15384e29119aSPierre Jolivet     C = *newmat;
15394e29119aSPierre Jolivet   } else C = NULL;
15409566063dSJacob Faibussowitsch   PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A),B,A->cmap->n,!C?MAT_INITIAL_MATRIX:MAT_REUSE_MATRIX,&C));
15419566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&B));
15424e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
15439566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A,&C));
15444e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
15454e29119aSPierre Jolivet   PetscFunctionReturn(0);
15464e29119aSPierre Jolivet }
15474e29119aSPierre Jolivet 
15484e29119aSPierre Jolivet PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15494e29119aSPierre Jolivet {
15504e29119aSPierre Jolivet   Mat            B,C;
15514e29119aSPierre Jolivet 
15524e29119aSPierre Jolivet   PetscFunctionBegin;
15539566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLocalMatrix(A,&C));
15549566063dSJacob Faibussowitsch   PetscCall(MatConvert_SeqDense_SeqAIJ(C,MATSEQAIJ,MAT_INITIAL_MATRIX,&B));
15554e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
15564e29119aSPierre Jolivet     C = *newmat;
15574e29119aSPierre Jolivet   } else C = NULL;
15589566063dSJacob Faibussowitsch   PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A),B,A->cmap->n,!C?MAT_INITIAL_MATRIX:MAT_REUSE_MATRIX,&C));
15599566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&B));
15604e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
15619566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A,&C));
15624e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
15634e29119aSPierre Jolivet   PetscFunctionReturn(0);
15644e29119aSPierre Jolivet }
15654e29119aSPierre Jolivet 
156665b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
1567cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15688baccfbdSHong Zhang {
15698ea901baSHong Zhang   Mat            mat_elemental;
157032d7a744SHong Zhang   PetscScalar    *v;
157132d7a744SHong Zhang   PetscInt       m=A->rmap->n,N=A->cmap->N,rstart=A->rmap->rstart,i,*rows,*cols;
15728ea901baSHong Zhang 
15738baccfbdSHong Zhang   PetscFunctionBegin;
1574378336b6SHong Zhang   if (reuse == MAT_REUSE_MATRIX) {
1575378336b6SHong Zhang     mat_elemental = *newmat;
15769566063dSJacob Faibussowitsch     PetscCall(MatZeroEntries(*newmat));
1577378336b6SHong Zhang   } else {
15789566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental));
15799566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(mat_elemental,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N));
15809566063dSJacob Faibussowitsch     PetscCall(MatSetType(mat_elemental,MATELEMENTAL));
15819566063dSJacob Faibussowitsch     PetscCall(MatSetUp(mat_elemental));
15829566063dSJacob Faibussowitsch     PetscCall(MatSetOption(mat_elemental,MAT_ROW_ORIENTED,PETSC_FALSE));
1583378336b6SHong Zhang   }
1584378336b6SHong Zhang 
15859566063dSJacob Faibussowitsch   PetscCall(PetscMalloc2(m,&rows,N,&cols));
158632d7a744SHong Zhang   for (i=0; i<N; i++) cols[i] = i;
158732d7a744SHong Zhang   for (i=0; i<m; i++) rows[i] = rstart + i;
15888ea901baSHong Zhang 
1589637a0070SStefano Zampini   /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */
15909566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(A,&v));
15919566063dSJacob Faibussowitsch   PetscCall(MatSetValues(mat_elemental,m,rows,N,cols,v,ADD_VALUES));
15929566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY));
15939566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY));
15949566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(A,&v));
15959566063dSJacob Faibussowitsch   PetscCall(PetscFree2(rows,cols));
15968ea901baSHong Zhang 
1597511c6705SHong Zhang   if (reuse == MAT_INPLACE_MATRIX) {
15989566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A,&mat_elemental));
15998ea901baSHong Zhang   } else {
16008ea901baSHong Zhang     *newmat = mat_elemental;
16018ea901baSHong Zhang   }
16028baccfbdSHong Zhang   PetscFunctionReturn(0);
16038baccfbdSHong Zhang }
160465b80a83SHong Zhang #endif
16058baccfbdSHong Zhang 
1606af53bab2SHong Zhang static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A,PetscInt col,PetscScalar **vals)
160786aefd0dSHong Zhang {
160886aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
160986aefd0dSHong Zhang 
161086aefd0dSHong Zhang   PetscFunctionBegin;
16119566063dSJacob Faibussowitsch   PetscCall(MatDenseGetColumn(mat->A,col,vals));
161286aefd0dSHong Zhang   PetscFunctionReturn(0);
161386aefd0dSHong Zhang }
161486aefd0dSHong Zhang 
1615af53bab2SHong Zhang static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A,PetscScalar **vals)
161686aefd0dSHong Zhang {
161786aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
161886aefd0dSHong Zhang 
161986aefd0dSHong Zhang   PetscFunctionBegin;
16209566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreColumn(mat->A,vals));
162186aefd0dSHong Zhang   PetscFunctionReturn(0);
162286aefd0dSHong Zhang }
162386aefd0dSHong Zhang 
162494e2cb23SJakub Kruzik PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm,Mat inmat,PetscInt n,MatReuse scall,Mat *outmat)
162594e2cb23SJakub Kruzik {
162694e2cb23SJakub Kruzik   Mat_MPIDense   *mat;
162794e2cb23SJakub Kruzik   PetscInt       m,nloc,N;
162894e2cb23SJakub Kruzik 
162994e2cb23SJakub Kruzik   PetscFunctionBegin;
16309566063dSJacob Faibussowitsch   PetscCall(MatGetSize(inmat,&m,&N));
16319566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(inmat,NULL,&nloc));
163294e2cb23SJakub Kruzik   if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */
163394e2cb23SJakub Kruzik     PetscInt sum;
163494e2cb23SJakub Kruzik 
163594e2cb23SJakub Kruzik     if (n == PETSC_DECIDE) {
16369566063dSJacob Faibussowitsch       PetscCall(PetscSplitOwnership(comm,&n,&N));
163794e2cb23SJakub Kruzik     }
163894e2cb23SJakub Kruzik     /* Check sum(n) = N */
16391c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(&n,&sum,1,MPIU_INT,MPI_SUM,comm));
164008401ef6SPierre Jolivet     PetscCheck(sum == N,PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT,sum,N);
164194e2cb23SJakub Kruzik 
16429566063dSJacob Faibussowitsch     PetscCall(MatCreateDense(comm,m,n,PETSC_DETERMINE,N,NULL,outmat));
16439566063dSJacob Faibussowitsch     PetscCall(MatSetOption(*outmat,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE));
164494e2cb23SJakub Kruzik   }
164594e2cb23SJakub Kruzik 
164694e2cb23SJakub Kruzik   /* numeric phase */
164794e2cb23SJakub Kruzik   mat = (Mat_MPIDense*)(*outmat)->data;
16489566063dSJacob Faibussowitsch   PetscCall(MatCopy(inmat,mat->A,SAME_NONZERO_PATTERN));
164994e2cb23SJakub Kruzik   PetscFunctionReturn(0);
165094e2cb23SJakub Kruzik }
165194e2cb23SJakub Kruzik 
1652637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1653637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDenseCUDA_MPIDense(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1654637a0070SStefano Zampini {
1655637a0070SStefano Zampini   Mat            B;
1656637a0070SStefano Zampini   Mat_MPIDense   *m;
1657637a0070SStefano Zampini 
1658637a0070SStefano Zampini   PetscFunctionBegin;
1659637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
16609566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(M,MAT_COPY_VALUES,newmat));
1661637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
16629566063dSJacob Faibussowitsch     PetscCall(MatCopy(M,*newmat,SAME_NONZERO_PATTERN));
1663637a0070SStefano Zampini   }
1664637a0070SStefano Zampini 
1665637a0070SStefano Zampini   B    = *newmat;
16669566063dSJacob Faibussowitsch   PetscCall(MatBindToCPU_MPIDenseCUDA(B,PETSC_TRUE));
16679566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->defaultvectype));
16689566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(VECSTANDARD,&B->defaultvectype));
16699566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSE));
16709566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",NULL));
16719566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",NULL));
16729566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",NULL));
16739566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",NULL));
16749566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",NULL));
16759566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",NULL));
16769566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",NULL));
16779566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",NULL));
16789566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",NULL));
16799566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",NULL));
16809566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",NULL));
16819566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",NULL));
16829566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",NULL));
16839566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",NULL));
1684637a0070SStefano Zampini   m    = (Mat_MPIDense*)(B)->data;
1685637a0070SStefano Zampini   if (m->A) {
16869566063dSJacob Faibussowitsch     PetscCall(MatConvert(m->A,MATSEQDENSE,MAT_INPLACE_MATRIX,&m->A));
1687637a0070SStefano Zampini   }
1688637a0070SStefano Zampini   B->ops->bindtocpu = NULL;
1689637a0070SStefano Zampini   B->offloadmask    = PETSC_OFFLOAD_CPU;
1690637a0070SStefano Zampini   PetscFunctionReturn(0);
1691637a0070SStefano Zampini }
1692637a0070SStefano Zampini 
1693637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDense_MPIDenseCUDA(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1694637a0070SStefano Zampini {
1695637a0070SStefano Zampini   Mat            B;
1696637a0070SStefano Zampini   Mat_MPIDense   *m;
1697637a0070SStefano Zampini 
1698637a0070SStefano Zampini   PetscFunctionBegin;
1699637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
17009566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(M,MAT_COPY_VALUES,newmat));
1701637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
17029566063dSJacob Faibussowitsch     PetscCall(MatCopy(M,*newmat,SAME_NONZERO_PATTERN));
1703637a0070SStefano Zampini   }
1704637a0070SStefano Zampini 
1705637a0070SStefano Zampini   B    = *newmat;
17069566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->defaultvectype));
17079566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(VECCUDA,&B->defaultvectype));
17089566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSECUDA));
17099566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",                    MatConvert_MPIDenseCUDA_MPIDense));
17109566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",        MatProductSetFromOptions_MPIAIJ_MPIDense));
17119566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
17129566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",        MatProductSetFromOptions_MPIDense_MPIAIJ));
17139566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
17149566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",                                MatDenseCUDAGetArray_MPIDenseCUDA));
17159566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",                            MatDenseCUDAGetArrayRead_MPIDenseCUDA));
17169566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",                           MatDenseCUDAGetArrayWrite_MPIDenseCUDA));
17179566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",                            MatDenseCUDARestoreArray_MPIDenseCUDA));
17189566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",                        MatDenseCUDARestoreArrayRead_MPIDenseCUDA));
17199566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",                       MatDenseCUDARestoreArrayWrite_MPIDenseCUDA));
17209566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",                              MatDenseCUDAPlaceArray_MPIDenseCUDA));
17219566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",                              MatDenseCUDAResetArray_MPIDenseCUDA));
17229566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",                            MatDenseCUDAReplaceArray_MPIDenseCUDA));
1723f5ff9c66SStefano Zampini   m    = (Mat_MPIDense*)(B->data);
1724637a0070SStefano Zampini   if (m->A) {
17259566063dSJacob Faibussowitsch     PetscCall(MatConvert(m->A,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&m->A));
1726637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_BOTH;
1727637a0070SStefano Zampini   } else {
1728637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_UNALLOCATED;
1729637a0070SStefano Zampini   }
17309566063dSJacob Faibussowitsch   PetscCall(MatBindToCPU_MPIDenseCUDA(B,PETSC_FALSE));
1731637a0070SStefano Zampini 
1732637a0070SStefano Zampini   B->ops->bindtocpu = MatBindToCPU_MPIDenseCUDA;
1733637a0070SStefano Zampini   PetscFunctionReturn(0);
1734637a0070SStefano Zampini }
1735637a0070SStefano Zampini #endif
1736637a0070SStefano Zampini 
17376947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
17386947451fSStefano Zampini {
17396947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17406947451fSStefano Zampini   PetscInt       lda;
17416947451fSStefano Zampini 
17426947451fSStefano Zampini   PetscFunctionBegin;
174328b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
174428b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17456947451fSStefano Zampini   if (!a->cvec) {
17469566063dSJacob Faibussowitsch     PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
17476947451fSStefano Zampini   }
17486947451fSStefano Zampini   a->vecinuse = col + 1;
17499566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
17509566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(a->A,(PetscScalar**)&a->ptrinuse));
17519566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
17526947451fSStefano Zampini   *v   = a->cvec;
17536947451fSStefano Zampini   PetscFunctionReturn(0);
17546947451fSStefano Zampini }
17556947451fSStefano Zampini 
17566947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
17576947451fSStefano Zampini {
17586947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17596947451fSStefano Zampini 
17606947451fSStefano Zampini   PetscFunctionBegin;
176128b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
176228b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
17636947451fSStefano Zampini   a->vecinuse = 0;
17649566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(a->A,(PetscScalar**)&a->ptrinuse));
17659566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
17666947451fSStefano Zampini   *v   = NULL;
17676947451fSStefano Zampini   PetscFunctionReturn(0);
17686947451fSStefano Zampini }
17696947451fSStefano Zampini 
17706947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
17716947451fSStefano Zampini {
17726947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17736947451fSStefano Zampini   PetscInt       lda;
17746947451fSStefano Zampini 
17756947451fSStefano Zampini   PetscFunctionBegin;
177628b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
177728b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17786947451fSStefano Zampini   if (!a->cvec) {
17799566063dSJacob Faibussowitsch     PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
17806947451fSStefano Zampini   }
17816947451fSStefano Zampini   a->vecinuse = col + 1;
17829566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
17839566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&a->ptrinuse));
17849566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
17859566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(a->cvec));
17866947451fSStefano Zampini   *v   = a->cvec;
17876947451fSStefano Zampini   PetscFunctionReturn(0);
17886947451fSStefano Zampini }
17896947451fSStefano Zampini 
17906947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
17916947451fSStefano Zampini {
17926947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17936947451fSStefano Zampini 
17946947451fSStefano Zampini   PetscFunctionBegin;
17955f80ce2aSJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
17965f80ce2aSJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
17976947451fSStefano Zampini   a->vecinuse = 0;
17989566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&a->ptrinuse));
17999566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(a->cvec));
18009566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
18016947451fSStefano Zampini   *v   = NULL;
18026947451fSStefano Zampini   PetscFunctionReturn(0);
18036947451fSStefano Zampini }
18046947451fSStefano Zampini 
18056947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
18066947451fSStefano Zampini {
18076947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
18086947451fSStefano Zampini   PetscInt       lda;
18096947451fSStefano Zampini 
18106947451fSStefano Zampini   PetscFunctionBegin;
18115f80ce2aSJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
18125f80ce2aSJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18136947451fSStefano Zampini   if (!a->cvec) {
18149566063dSJacob Faibussowitsch     PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
18156947451fSStefano Zampini   }
18166947451fSStefano Zampini   a->vecinuse = col + 1;
18179566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
18189566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
18199566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
18206947451fSStefano Zampini   *v   = a->cvec;
18216947451fSStefano Zampini   PetscFunctionReturn(0);
18226947451fSStefano Zampini }
18236947451fSStefano Zampini 
18246947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
18256947451fSStefano Zampini {
18266947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
18276947451fSStefano Zampini 
18286947451fSStefano Zampini   PetscFunctionBegin;
18295f80ce2aSJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
18305f80ce2aSJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
18316947451fSStefano Zampini   a->vecinuse = 0;
18329566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
18339566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
18346947451fSStefano Zampini   *v   = NULL;
18356947451fSStefano Zampini   PetscFunctionReturn(0);
18366947451fSStefano Zampini }
18376947451fSStefano Zampini 
1838a2748737SPierre Jolivet PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A,PetscInt rbegin,PetscInt rend,PetscInt cbegin,PetscInt cend,Mat *v)
18395ea7661aSPierre Jolivet {
18405ea7661aSPierre Jolivet   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
1841616b8fbbSStefano Zampini   Mat_MPIDense *c;
1842616b8fbbSStefano Zampini   MPI_Comm     comm;
1843a2748737SPierre Jolivet   PetscInt     pbegin, pend;
18445ea7661aSPierre Jolivet 
18455ea7661aSPierre Jolivet   PetscFunctionBegin;
18469566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
18475f80ce2aSJacob Faibussowitsch   PetscCheck(!a->vecinuse,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
18485f80ce2aSJacob Faibussowitsch   PetscCheck(!a->matinuse,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1849a2748737SPierre Jolivet   pbegin = PetscMax(0,PetscMin(A->rmap->rend,rbegin)-A->rmap->rstart);
1850a2748737SPierre Jolivet   pend = PetscMin(A->rmap->n,PetscMax(0,rend-A->rmap->rstart));
18515ea7661aSPierre Jolivet   if (!a->cmat) {
18529566063dSJacob Faibussowitsch     PetscCall(MatCreate(comm,&a->cmat));
18539566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cmat));
18549566063dSJacob Faibussowitsch     PetscCall(MatSetType(a->cmat,((PetscObject)A)->type_name));
1855a2748737SPierre Jolivet     if (rend-rbegin==A->rmap->N) PetscCall(PetscLayoutReference(A->rmap,&a->cmat->rmap));
1856a2748737SPierre Jolivet     else {
1857a2748737SPierre Jolivet       PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap,pend-pbegin));
1858a2748737SPierre Jolivet       PetscCall(PetscLayoutSetSize(a->cmat->rmap,rend-rbegin));
1859a2748737SPierre Jolivet       PetscCall(PetscLayoutSetUp(a->cmat->rmap));
1860a2748737SPierre Jolivet     }
18619566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetSize(a->cmat->cmap,cend-cbegin));
18629566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(a->cmat->cmap));
1863a2748737SPierre Jolivet   } else {
1864a2748737SPierre Jolivet     PetscBool same = (PetscBool)(rend-rbegin == a->cmat->rmap->N);
1865a2748737SPierre Jolivet     if (same && a->cmat->rmap->N != A->rmap->N) {
1866a2748737SPierre Jolivet       same = (PetscBool)(pend-pbegin == a->cmat->rmap->n);
1867a2748737SPierre Jolivet       PetscCall(MPIU_Allreduce(MPI_IN_PLACE,&same,1,MPIU_BOOL,MPI_LAND,PetscObjectComm((PetscObject)A)));
1868a2748737SPierre Jolivet     }
1869a2748737SPierre Jolivet     if (!same) {
1870a2748737SPierre Jolivet       PetscCall(PetscLayoutDestroy(&a->cmat->rmap));
1871a2748737SPierre Jolivet       PetscCall(PetscLayoutCreate(comm,&a->cmat->rmap));
1872a2748737SPierre Jolivet       PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap,pend-pbegin));
1873a2748737SPierre Jolivet       PetscCall(PetscLayoutSetSize(a->cmat->rmap,rend-rbegin));
1874a2748737SPierre Jolivet       PetscCall(PetscLayoutSetUp(a->cmat->rmap));
1875a2748737SPierre Jolivet     }
1876a2748737SPierre Jolivet     if (cend-cbegin != a->cmat->cmap->N) {
18779566063dSJacob Faibussowitsch       PetscCall(PetscLayoutDestroy(&a->cmat->cmap));
18789566063dSJacob Faibussowitsch       PetscCall(PetscLayoutCreate(comm,&a->cmat->cmap));
18799566063dSJacob Faibussowitsch       PetscCall(PetscLayoutSetSize(a->cmat->cmap,cend-cbegin));
18809566063dSJacob Faibussowitsch       PetscCall(PetscLayoutSetUp(a->cmat->cmap));
18815ea7661aSPierre Jolivet     }
1882a2748737SPierre Jolivet   }
1883616b8fbbSStefano Zampini   c = (Mat_MPIDense*)a->cmat->data;
18845f80ce2aSJacob Faibussowitsch   PetscCheck(!c->A,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1885a2748737SPierre Jolivet   PetscCall(MatDenseGetSubMatrix(a->A,pbegin,pend,cbegin,cend,&c->A));
1886616b8fbbSStefano Zampini   a->cmat->preallocated = PETSC_TRUE;
1887616b8fbbSStefano Zampini   a->cmat->assembled = PETSC_TRUE;
18885ea7661aSPierre Jolivet   a->matinuse = cbegin + 1;
18895ea7661aSPierre Jolivet   *v = a->cmat;
18905ea7661aSPierre Jolivet   PetscFunctionReturn(0);
18915ea7661aSPierre Jolivet }
18925ea7661aSPierre Jolivet 
18935ea7661aSPierre Jolivet PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A,Mat *v)
18945ea7661aSPierre Jolivet {
18955ea7661aSPierre Jolivet   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
1896616b8fbbSStefano Zampini   Mat_MPIDense *c;
18975ea7661aSPierre Jolivet 
18985ea7661aSPierre Jolivet   PetscFunctionBegin;
18995f80ce2aSJacob Faibussowitsch   PetscCheck(a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetSubMatrix() first");
19005f80ce2aSJacob Faibussowitsch   PetscCheck(a->cmat,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal matrix");
19015f80ce2aSJacob Faibussowitsch   PetscCheck(*v == a->cmat,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Not the matrix obtained from MatDenseGetSubMatrix()");
19025ea7661aSPierre Jolivet   a->matinuse = 0;
1903616b8fbbSStefano Zampini   c = (Mat_MPIDense*)a->cmat->data;
19049566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreSubMatrix(a->A,&c->A));
19055ea7661aSPierre Jolivet   *v = NULL;
19065ea7661aSPierre Jolivet   PetscFunctionReturn(0);
19075ea7661aSPierre Jolivet }
19085ea7661aSPierre Jolivet 
1909002bc6daSRichard Tran Mills /*MC
1910002bc6daSRichard Tran Mills    MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices.
1911002bc6daSRichard Tran Mills 
1912002bc6daSRichard Tran Mills    Options Database Keys:
1913002bc6daSRichard Tran Mills . -mat_type mpidense - sets the matrix type to "mpidense" during a call to MatSetFromOptions()
1914002bc6daSRichard Tran Mills 
1915002bc6daSRichard Tran Mills   Level: beginner
1916002bc6daSRichard Tran Mills 
1917db781477SPatrick Sanan .seealso: `MatCreateDense()`
1918002bc6daSRichard Tran Mills 
1919002bc6daSRichard Tran Mills M*/
19208cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreate_MPIDense(Mat mat)
1921273d9f13SBarry Smith {
1922273d9f13SBarry Smith   Mat_MPIDense   *a;
1923273d9f13SBarry Smith 
1924273d9f13SBarry Smith   PetscFunctionBegin;
19259566063dSJacob Faibussowitsch   PetscCall(PetscNewLog(mat,&a));
1926b0a32e0cSBarry Smith   mat->data = (void*)a;
19279566063dSJacob Faibussowitsch   PetscCall(PetscMemcpy(mat->ops,&MatOps_Values,sizeof(struct _MatOps)));
1928273d9f13SBarry Smith 
1929273d9f13SBarry Smith   mat->insertmode = NOT_SET_VALUES;
1930273d9f13SBarry Smith 
1931273d9f13SBarry Smith   /* build cache for off array entries formed */
1932273d9f13SBarry Smith   a->donotstash = PETSC_FALSE;
19332205254eSKarl Rupp 
19349566063dSJacob Faibussowitsch   PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat),1,&mat->stash));
1935273d9f13SBarry Smith 
1936273d9f13SBarry Smith   /* stuff used for matrix vector multiply */
1937f4259b30SLisandro Dalcin   a->lvec        = NULL;
1938f4259b30SLisandro Dalcin   a->Mvctx       = NULL;
1939273d9f13SBarry Smith   a->roworiented = PETSC_TRUE;
1940273d9f13SBarry Smith 
19419566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",MatDenseGetLDA_MPIDense));
19429566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",MatDenseSetLDA_MPIDense));
19439566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",MatDenseGetArray_MPIDense));
19449566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",MatDenseRestoreArray_MPIDense));
19459566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",MatDenseGetArrayRead_MPIDense));
19469566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",MatDenseRestoreArrayRead_MPIDense));
19479566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",MatDenseGetArrayWrite_MPIDense));
19489566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",MatDenseRestoreArrayWrite_MPIDense));
19499566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",MatDensePlaceArray_MPIDense));
19509566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",MatDenseResetArray_MPIDense));
19519566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",MatDenseReplaceArray_MPIDense));
19529566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense));
19539566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense));
19549566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense));
19559566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense));
19569566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense));
19579566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense));
19589566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",MatDenseGetSubMatrix_MPIDense));
19599566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",MatDenseRestoreSubMatrix_MPIDense));
19609566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpiaij_mpidense_C",MatConvert_MPIAIJ_MPIDense));
19619566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpiaij_C",MatConvert_MPIDense_MPIAIJ));
19628baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
19639566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",MatConvert_MPIDense_Elemental));
19648baccfbdSHong Zhang #endif
1965d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
19669566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",MatConvert_Dense_ScaLAPACK));
1967d24d4204SJose E. Roman #endif
1968637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
19699566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpidensecuda_C",MatConvert_MPIDense_MPIDenseCUDA));
1970637a0070SStefano Zampini #endif
19719566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",MatMPIDenseSetPreallocation_MPIDense));
19729566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
19739566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
19746718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
19759566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
19769566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
19776718818eSStefano Zampini #endif
19788949adfdSHong Zhang 
19799566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",MatDenseGetColumn_MPIDense));
19809566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",MatDenseRestoreColumn_MPIDense));
19819566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)mat,MATMPIDENSE));
1982273d9f13SBarry Smith   PetscFunctionReturn(0);
1983273d9f13SBarry Smith }
1984273d9f13SBarry Smith 
1985209238afSKris Buschelman /*MC
1986637a0070SStefano Zampini    MATMPIDENSECUDA - MATMPIDENSECUDA = "mpidensecuda" - A matrix type to be used for distributed dense matrices on GPUs.
1987637a0070SStefano Zampini 
1988637a0070SStefano Zampini    Options Database Keys:
1989637a0070SStefano Zampini . -mat_type mpidensecuda - sets the matrix type to "mpidensecuda" during a call to MatSetFromOptions()
1990637a0070SStefano Zampini 
1991637a0070SStefano Zampini   Level: beginner
1992637a0070SStefano Zampini 
1993637a0070SStefano Zampini .seealso:
1994637a0070SStefano Zampini 
1995637a0070SStefano Zampini M*/
1996637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1997a4af0ceeSJacob Faibussowitsch #include <petsc/private/deviceimpl.h>
1998637a0070SStefano Zampini PETSC_EXTERN PetscErrorCode MatCreate_MPIDenseCUDA(Mat B)
1999637a0070SStefano Zampini {
2000637a0070SStefano Zampini   PetscFunctionBegin;
20019566063dSJacob Faibussowitsch   PetscCall(PetscDeviceInitialize(PETSC_DEVICE_CUDA));
20029566063dSJacob Faibussowitsch   PetscCall(MatCreate_MPIDense(B));
20039566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_MPIDenseCUDA(B,MATMPIDENSECUDA,MAT_INPLACE_MATRIX,&B));
2004637a0070SStefano Zampini   PetscFunctionReturn(0);
2005637a0070SStefano Zampini }
2006637a0070SStefano Zampini #endif
2007637a0070SStefano Zampini 
2008637a0070SStefano Zampini /*MC
2009002d173eSKris Buschelman    MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices.
2010209238afSKris Buschelman 
2011209238afSKris Buschelman    This matrix type is identical to MATSEQDENSE when constructed with a single process communicator,
2012209238afSKris Buschelman    and MATMPIDENSE otherwise.
2013209238afSKris Buschelman 
2014209238afSKris Buschelman    Options Database Keys:
2015209238afSKris Buschelman . -mat_type dense - sets the matrix type to "dense" during a call to MatSetFromOptions()
2016209238afSKris Buschelman 
2017209238afSKris Buschelman   Level: beginner
2018209238afSKris Buschelman 
2019c2e3fba1SPatrick Sanan .seealso: `MATSEQDENSE`, `MATMPIDENSE`, `MATDENSECUDA`
20206947451fSStefano Zampini M*/
20216947451fSStefano Zampini 
20226947451fSStefano Zampini /*MC
20236947451fSStefano Zampini    MATDENSECUDA - MATDENSECUDA = "densecuda" - A matrix type to be used for dense matrices on GPUs.
20246947451fSStefano Zampini 
20256947451fSStefano Zampini    This matrix type is identical to MATSEQDENSECUDA when constructed with a single process communicator,
20266947451fSStefano Zampini    and MATMPIDENSECUDA otherwise.
20276947451fSStefano Zampini 
20286947451fSStefano Zampini    Options Database Keys:
20296947451fSStefano Zampini . -mat_type densecuda - sets the matrix type to "densecuda" during a call to MatSetFromOptions()
20306947451fSStefano Zampini 
20316947451fSStefano Zampini   Level: beginner
20326947451fSStefano Zampini 
2033c2e3fba1SPatrick Sanan .seealso: `MATSEQDENSECUDA`, `MATMPIDENSECUDA`, `MATDENSE`
2034209238afSKris Buschelman M*/
2035209238afSKris Buschelman 
2036273d9f13SBarry Smith /*@C
2037273d9f13SBarry Smith    MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries
2038273d9f13SBarry Smith 
20398f490ea3SStefano Zampini    Collective
2040273d9f13SBarry Smith 
2041273d9f13SBarry Smith    Input Parameters:
20421c4f3114SJed Brown .  B - the matrix
20430298fd71SBarry Smith -  data - optional location of matrix data.  Set data=NULL for PETSc
2044273d9f13SBarry Smith    to control all matrix memory allocation.
2045273d9f13SBarry Smith 
2046273d9f13SBarry Smith    Notes:
2047273d9f13SBarry Smith    The dense format is fully compatible with standard Fortran 77
2048273d9f13SBarry Smith    storage by columns.
2049273d9f13SBarry Smith 
2050273d9f13SBarry Smith    The data input variable is intended primarily for Fortran programmers
2051273d9f13SBarry Smith    who wish to allocate their own matrix memory space.  Most users should
20520298fd71SBarry Smith    set data=NULL.
2053273d9f13SBarry Smith 
2054273d9f13SBarry Smith    Level: intermediate
2055273d9f13SBarry Smith 
2056db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()`
2057273d9f13SBarry Smith @*/
20581c4f3114SJed Brown PetscErrorCode  MatMPIDenseSetPreallocation(Mat B,PetscScalar *data)
2059273d9f13SBarry Smith {
2060273d9f13SBarry Smith   PetscFunctionBegin;
2061d5ea218eSStefano Zampini   PetscValidHeaderSpecific(B,MAT_CLASSID,1);
2062cac4c232SBarry Smith   PetscTryMethod(B,"MatMPIDenseSetPreallocation_C",(Mat,PetscScalar*),(B,data));
2063273d9f13SBarry Smith   PetscFunctionReturn(0);
2064273d9f13SBarry Smith }
2065273d9f13SBarry Smith 
2066d3042a70SBarry Smith /*@
2067637a0070SStefano Zampini    MatDensePlaceArray - Allows one to replace the array in a dense matrix with an
2068d3042a70SBarry Smith    array provided by the user. This is useful to avoid copying an array
2069d3042a70SBarry Smith    into a matrix
2070d3042a70SBarry Smith 
2071d3042a70SBarry Smith    Not Collective
2072d3042a70SBarry Smith 
2073d3042a70SBarry Smith    Input Parameters:
2074d3042a70SBarry Smith +  mat - the matrix
2075d3042a70SBarry Smith -  array - the array in column major order
2076d3042a70SBarry Smith 
2077d3042a70SBarry Smith    Notes:
2078d3042a70SBarry Smith    You can return to the original array with a call to MatDenseResetArray(). The user is responsible for freeing this array; it will not be
2079d3042a70SBarry Smith    freed when the matrix is destroyed.
2080d3042a70SBarry Smith 
2081d3042a70SBarry Smith    Level: developer
2082d3042a70SBarry Smith 
2083db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`
2084d3042a70SBarry Smith 
2085d3042a70SBarry Smith @*/
2086637a0070SStefano Zampini PetscErrorCode  MatDensePlaceArray(Mat mat,const PetscScalar *array)
2087d3042a70SBarry Smith {
2088d3042a70SBarry Smith   PetscFunctionBegin;
2089d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2090cac4c232SBarry Smith   PetscUseMethod(mat,"MatDensePlaceArray_C",(Mat,const PetscScalar*),(mat,array));
20919566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2092637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2093637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2094637a0070SStefano Zampini #endif
2095d3042a70SBarry Smith   PetscFunctionReturn(0);
2096d3042a70SBarry Smith }
2097d3042a70SBarry Smith 
2098d3042a70SBarry Smith /*@
2099d3042a70SBarry Smith    MatDenseResetArray - Resets the matrix array to that it previously had before the call to MatDensePlaceArray()
2100d3042a70SBarry Smith 
2101d3042a70SBarry Smith    Not Collective
2102d3042a70SBarry Smith 
2103d3042a70SBarry Smith    Input Parameters:
2104d3042a70SBarry Smith .  mat - the matrix
2105d3042a70SBarry Smith 
2106d3042a70SBarry Smith    Notes:
2107d3042a70SBarry Smith    You can only call this after a call to MatDensePlaceArray()
2108d3042a70SBarry Smith 
2109d3042a70SBarry Smith    Level: developer
2110d3042a70SBarry Smith 
2111db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`
2112d3042a70SBarry Smith 
2113d3042a70SBarry Smith @*/
2114d3042a70SBarry Smith PetscErrorCode  MatDenseResetArray(Mat mat)
2115d3042a70SBarry Smith {
2116d3042a70SBarry Smith   PetscFunctionBegin;
2117d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2118cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseResetArray_C",(Mat),(mat));
21199566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2120d3042a70SBarry Smith   PetscFunctionReturn(0);
2121d3042a70SBarry Smith }
2122d3042a70SBarry Smith 
2123d5ea218eSStefano Zampini /*@
2124d5ea218eSStefano Zampini    MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an
2125d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2126d5ea218eSStefano Zampini    into a matrix
2127d5ea218eSStefano Zampini 
2128d5ea218eSStefano Zampini    Not Collective
2129d5ea218eSStefano Zampini 
2130d5ea218eSStefano Zampini    Input Parameters:
2131d5ea218eSStefano Zampini +  mat - the matrix
2132d5ea218eSStefano Zampini -  array - the array in column major order
2133d5ea218eSStefano Zampini 
2134d5ea218eSStefano Zampini    Notes:
2135d5ea218eSStefano Zampini    The memory passed in MUST be obtained with PetscMalloc() and CANNOT be
2136d5ea218eSStefano Zampini    freed by the user. It will be freed when the matrix is destroyed.
2137d5ea218eSStefano Zampini 
2138d5ea218eSStefano Zampini    Level: developer
2139d5ea218eSStefano Zampini 
2140db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `VecReplaceArray()`
2141d5ea218eSStefano Zampini @*/
2142d5ea218eSStefano Zampini PetscErrorCode  MatDenseReplaceArray(Mat mat,const PetscScalar *array)
2143d5ea218eSStefano Zampini {
2144d5ea218eSStefano Zampini   PetscFunctionBegin;
2145d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2146cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseReplaceArray_C",(Mat,const PetscScalar*),(mat,array));
21479566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2148d5ea218eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
2149d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2150d5ea218eSStefano Zampini #endif
2151d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2152d5ea218eSStefano Zampini }
2153d5ea218eSStefano Zampini 
2154637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
21558965ea79SLois Curfman McInnes /*@C
2156637a0070SStefano Zampini    MatDenseCUDAPlaceArray - Allows one to replace the GPU array in a dense matrix with an
2157637a0070SStefano Zampini    array provided by the user. This is useful to avoid copying an array
2158637a0070SStefano Zampini    into a matrix
2159637a0070SStefano Zampini 
2160637a0070SStefano Zampini    Not Collective
2161637a0070SStefano Zampini 
2162637a0070SStefano Zampini    Input Parameters:
2163637a0070SStefano Zampini +  mat - the matrix
2164637a0070SStefano Zampini -  array - the array in column major order
2165637a0070SStefano Zampini 
2166637a0070SStefano Zampini    Notes:
2167637a0070SStefano Zampini    You can return to the original array with a call to MatDenseCUDAResetArray(). The user is responsible for freeing this array; it will not be
2168637a0070SStefano Zampini    freed when the matrix is destroyed. The array must have been allocated with cudaMalloc().
2169637a0070SStefano Zampini 
2170637a0070SStefano Zampini    Level: developer
2171637a0070SStefano Zampini 
2172db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAResetArray()`
2173637a0070SStefano Zampini @*/
2174637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAPlaceArray(Mat mat,const PetscScalar *array)
2175637a0070SStefano Zampini {
2176637a0070SStefano Zampini   PetscFunctionBegin;
2177d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2178cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseCUDAPlaceArray_C",(Mat,const PetscScalar*),(mat,array));
21799566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2180637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2181637a0070SStefano Zampini   PetscFunctionReturn(0);
2182637a0070SStefano Zampini }
2183637a0070SStefano Zampini 
2184637a0070SStefano Zampini /*@C
2185637a0070SStefano Zampini    MatDenseCUDAResetArray - Resets the matrix array to that it previously had before the call to MatDenseCUDAPlaceArray()
2186637a0070SStefano Zampini 
2187637a0070SStefano Zampini    Not Collective
2188637a0070SStefano Zampini 
2189637a0070SStefano Zampini    Input Parameters:
2190637a0070SStefano Zampini .  mat - the matrix
2191637a0070SStefano Zampini 
2192637a0070SStefano Zampini    Notes:
2193637a0070SStefano Zampini    You can only call this after a call to MatDenseCUDAPlaceArray()
2194637a0070SStefano Zampini 
2195637a0070SStefano Zampini    Level: developer
2196637a0070SStefano Zampini 
2197db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAPlaceArray()`
2198637a0070SStefano Zampini 
2199637a0070SStefano Zampini @*/
2200637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAResetArray(Mat mat)
2201637a0070SStefano Zampini {
2202637a0070SStefano Zampini   PetscFunctionBegin;
2203d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2204cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseCUDAResetArray_C",(Mat),(mat));
22059566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2206637a0070SStefano Zampini   PetscFunctionReturn(0);
2207637a0070SStefano Zampini }
2208637a0070SStefano Zampini 
2209637a0070SStefano Zampini /*@C
2210d5ea218eSStefano Zampini    MatDenseCUDAReplaceArray - Allows one to replace the GPU array in a dense matrix with an
2211d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2212d5ea218eSStefano Zampini    into a matrix
2213d5ea218eSStefano Zampini 
2214d5ea218eSStefano Zampini    Not Collective
2215d5ea218eSStefano Zampini 
2216d5ea218eSStefano Zampini    Input Parameters:
2217d5ea218eSStefano Zampini +  mat - the matrix
2218d5ea218eSStefano Zampini -  array - the array in column major order
2219d5ea218eSStefano Zampini 
2220d5ea218eSStefano Zampini    Notes:
2221d5ea218eSStefano Zampini    This permanently replaces the GPU array and frees the memory associated with the old GPU array.
2222d5ea218eSStefano Zampini    The memory passed in CANNOT be freed by the user. It will be freed
2223d5ea218eSStefano Zampini    when the matrix is destroyed. The array should respect the matrix leading dimension.
2224d5ea218eSStefano Zampini 
2225d5ea218eSStefano Zampini    Level: developer
2226d5ea218eSStefano Zampini 
2227db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAPlaceArray()`, `MatDenseCUDAResetArray()`
2228d5ea218eSStefano Zampini @*/
2229d5ea218eSStefano Zampini PetscErrorCode  MatDenseCUDAReplaceArray(Mat mat,const PetscScalar *array)
2230d5ea218eSStefano Zampini {
2231d5ea218eSStefano Zampini   PetscFunctionBegin;
2232d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2233cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseCUDAReplaceArray_C",(Mat,const PetscScalar*),(mat,array));
22349566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2235d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2236d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2237d5ea218eSStefano Zampini }
2238d5ea218eSStefano Zampini 
2239d5ea218eSStefano Zampini /*@C
2240637a0070SStefano Zampini    MatDenseCUDAGetArrayWrite - Provides write access to the CUDA buffer inside a dense matrix.
2241637a0070SStefano Zampini 
2242637a0070SStefano Zampini    Not Collective
2243637a0070SStefano Zampini 
2244637a0070SStefano Zampini    Input Parameters:
2245637a0070SStefano Zampini .  A - the matrix
2246637a0070SStefano Zampini 
2247637a0070SStefano Zampini    Output Parameters
2248637a0070SStefano Zampini .  array - the GPU array in column major order
2249637a0070SStefano Zampini 
2250637a0070SStefano Zampini    Notes:
2251637a0070SStefano Zampini    The data on the GPU may not be updated due to operations done on the CPU. If you need updated data, use MatDenseCUDAGetArray(). The array must be restored with MatDenseCUDARestoreArrayWrite() when no longer needed.
2252637a0070SStefano Zampini 
2253637a0070SStefano Zampini    Level: developer
2254637a0070SStefano Zampini 
2255db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayRead()`, `MatDenseCUDARestoreArrayRead()`
2256637a0070SStefano Zampini @*/
2257637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayWrite(Mat A, PetscScalar **a)
2258637a0070SStefano Zampini {
2259637a0070SStefano Zampini   PetscFunctionBegin;
2260d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2261cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDAGetArrayWrite_C",(Mat,PetscScalar**),(A,a));
22629566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2263637a0070SStefano Zampini   PetscFunctionReturn(0);
2264637a0070SStefano Zampini }
2265637a0070SStefano Zampini 
2266637a0070SStefano Zampini /*@C
2267637a0070SStefano Zampini    MatDenseCUDARestoreArrayWrite - Restore write access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArrayWrite().
2268637a0070SStefano Zampini 
2269637a0070SStefano Zampini    Not Collective
2270637a0070SStefano Zampini 
2271637a0070SStefano Zampini    Input Parameters:
2272637a0070SStefano Zampini +  A - the matrix
2273637a0070SStefano Zampini -  array - the GPU array in column major order
2274637a0070SStefano Zampini 
2275637a0070SStefano Zampini    Notes:
2276637a0070SStefano Zampini 
2277637a0070SStefano Zampini    Level: developer
2278637a0070SStefano Zampini 
2279db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`, `MatDenseCUDAGetArrayRead()`
2280637a0070SStefano Zampini @*/
2281637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayWrite(Mat A, PetscScalar **a)
2282637a0070SStefano Zampini {
2283637a0070SStefano Zampini   PetscFunctionBegin;
2284d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2285cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDARestoreArrayWrite_C",(Mat,PetscScalar**),(A,a));
22869566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2287637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2288637a0070SStefano Zampini   PetscFunctionReturn(0);
2289637a0070SStefano Zampini }
2290637a0070SStefano Zampini 
2291637a0070SStefano Zampini /*@C
2292637a0070SStefano Zampini    MatDenseCUDAGetArrayRead - Provides read-only access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArrayRead() when no longer needed.
2293637a0070SStefano Zampini 
2294637a0070SStefano Zampini    Not Collective
2295637a0070SStefano Zampini 
2296637a0070SStefano Zampini    Input Parameters:
2297637a0070SStefano Zampini .  A - the matrix
2298637a0070SStefano Zampini 
2299637a0070SStefano Zampini    Output Parameters
2300637a0070SStefano Zampini .  array - the GPU array in column major order
2301637a0070SStefano Zampini 
2302637a0070SStefano Zampini    Notes:
2303637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2304637a0070SStefano Zampini 
2305637a0070SStefano Zampini    Level: developer
2306637a0070SStefano Zampini 
2307db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`
2308637a0070SStefano Zampini @*/
2309637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayRead(Mat A, const PetscScalar **a)
2310637a0070SStefano Zampini {
2311637a0070SStefano Zampini   PetscFunctionBegin;
2312d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2313cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDAGetArrayRead_C",(Mat,const PetscScalar**),(A,a));
2314637a0070SStefano Zampini   PetscFunctionReturn(0);
2315637a0070SStefano Zampini }
2316637a0070SStefano Zampini 
2317637a0070SStefano Zampini /*@C
2318637a0070SStefano Zampini    MatDenseCUDARestoreArrayRead - Restore read-only access to the CUDA buffer inside a dense matrix previously obtained with a call to MatDenseCUDAGetArrayRead().
2319637a0070SStefano Zampini 
2320637a0070SStefano Zampini    Not Collective
2321637a0070SStefano Zampini 
2322637a0070SStefano Zampini    Input Parameters:
2323637a0070SStefano Zampini +  A - the matrix
2324637a0070SStefano Zampini -  array - the GPU array in column major order
2325637a0070SStefano Zampini 
2326637a0070SStefano Zampini    Notes:
2327637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2328637a0070SStefano Zampini 
2329637a0070SStefano Zampini    Level: developer
2330637a0070SStefano Zampini 
2331db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDAGetArrayRead()`
2332637a0070SStefano Zampini @*/
2333637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayRead(Mat A, const PetscScalar **a)
2334637a0070SStefano Zampini {
2335637a0070SStefano Zampini   PetscFunctionBegin;
2336cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDARestoreArrayRead_C",(Mat,const PetscScalar**),(A,a));
2337637a0070SStefano Zampini   PetscFunctionReturn(0);
2338637a0070SStefano Zampini }
2339637a0070SStefano Zampini 
2340637a0070SStefano Zampini /*@C
2341637a0070SStefano Zampini    MatDenseCUDAGetArray - Provides access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArray() when no longer needed.
2342637a0070SStefano Zampini 
2343637a0070SStefano Zampini    Not Collective
2344637a0070SStefano Zampini 
2345637a0070SStefano Zampini    Input Parameters:
2346637a0070SStefano Zampini .  A - the matrix
2347637a0070SStefano Zampini 
2348637a0070SStefano Zampini    Output Parameters
2349637a0070SStefano Zampini .  array - the GPU array in column major order
2350637a0070SStefano Zampini 
2351637a0070SStefano Zampini    Notes:
2352637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite(). For read-only access, use MatDenseCUDAGetArrayRead().
2353637a0070SStefano Zampini 
2354637a0070SStefano Zampini    Level: developer
2355637a0070SStefano Zampini 
2356db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArrayRead()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`
2357637a0070SStefano Zampini @*/
2358637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArray(Mat A, PetscScalar **a)
2359637a0070SStefano Zampini {
2360637a0070SStefano Zampini   PetscFunctionBegin;
2361d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2362cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDAGetArray_C",(Mat,PetscScalar**),(A,a));
23639566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2364637a0070SStefano Zampini   PetscFunctionReturn(0);
2365637a0070SStefano Zampini }
2366637a0070SStefano Zampini 
2367637a0070SStefano Zampini /*@C
2368637a0070SStefano Zampini    MatDenseCUDARestoreArray - Restore access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArray().
2369637a0070SStefano Zampini 
2370637a0070SStefano Zampini    Not Collective
2371637a0070SStefano Zampini 
2372637a0070SStefano Zampini    Input Parameters:
2373637a0070SStefano Zampini +  A - the matrix
2374637a0070SStefano Zampini -  array - the GPU array in column major order
2375637a0070SStefano Zampini 
2376637a0070SStefano Zampini    Notes:
2377637a0070SStefano Zampini 
2378637a0070SStefano Zampini    Level: developer
2379637a0070SStefano Zampini 
2380db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`, `MatDenseCUDAGetArrayRead()`
2381637a0070SStefano Zampini @*/
2382637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArray(Mat A, PetscScalar **a)
2383637a0070SStefano Zampini {
2384637a0070SStefano Zampini   PetscFunctionBegin;
2385d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2386cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDARestoreArray_C",(Mat,PetscScalar**),(A,a));
23879566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2388637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2389637a0070SStefano Zampini   PetscFunctionReturn(0);
2390637a0070SStefano Zampini }
2391637a0070SStefano Zampini #endif
2392637a0070SStefano Zampini 
2393637a0070SStefano Zampini /*@C
2394637a0070SStefano Zampini    MatCreateDense - Creates a matrix in dense format.
23958965ea79SLois Curfman McInnes 
2396d083f849SBarry Smith    Collective
2397db81eaa0SLois Curfman McInnes 
23988965ea79SLois Curfman McInnes    Input Parameters:
2399db81eaa0SLois Curfman McInnes +  comm - MPI communicator
24008965ea79SLois Curfman McInnes .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2401db81eaa0SLois Curfman McInnes .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
24028965ea79SLois Curfman McInnes .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2403db81eaa0SLois Curfman McInnes .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
24046cfe35ddSJose E. Roman -  data - optional location of matrix data.  Set data=NULL (PETSC_NULL_SCALAR for Fortran users) for PETSc
2405dfc5480cSLois Curfman McInnes    to control all matrix memory allocation.
24068965ea79SLois Curfman McInnes 
24078965ea79SLois Curfman McInnes    Output Parameter:
2408477f1c0bSLois Curfman McInnes .  A - the matrix
24098965ea79SLois Curfman McInnes 
2410b259b22eSLois Curfman McInnes    Notes:
241139ddd567SLois Curfman McInnes    The dense format is fully compatible with standard Fortran 77
241239ddd567SLois Curfman McInnes    storage by columns.
2413002bc6daSRichard Tran Mills    Note that, although local portions of the matrix are stored in column-major
2414002bc6daSRichard Tran Mills    order, the matrix is partitioned across MPI ranks by row.
24158965ea79SLois Curfman McInnes 
241618f449edSLois Curfman McInnes    The data input variable is intended primarily for Fortran programmers
241718f449edSLois Curfman McInnes    who wish to allocate their own matrix memory space.  Most users should
24186cfe35ddSJose E. Roman    set data=NULL (PETSC_NULL_SCALAR for Fortran users).
241918f449edSLois Curfman McInnes 
24208965ea79SLois Curfman McInnes    The user MUST specify either the local or global matrix dimensions
24218965ea79SLois Curfman McInnes    (possibly both).
24228965ea79SLois Curfman McInnes 
2423027ccd11SLois Curfman McInnes    Level: intermediate
2424027ccd11SLois Curfman McInnes 
2425db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()`
24268965ea79SLois Curfman McInnes @*/
242769b1f4b7SBarry Smith PetscErrorCode  MatCreateDense(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
24288965ea79SLois Curfman McInnes {
24293a40ed3dSBarry Smith   PetscFunctionBegin;
24309566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm,A));
24319566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A,m,n,M,N));
24326f08ad05SPierre Jolivet   PetscCall(MatSetType(*A,MATDENSE));
24339566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseSetPreallocation(*A,data));
24346f08ad05SPierre Jolivet   PetscCall(MatMPIDenseSetPreallocation(*A,data));
24353a40ed3dSBarry Smith   PetscFunctionReturn(0);
24368965ea79SLois Curfman McInnes }
24378965ea79SLois Curfman McInnes 
2438637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2439637a0070SStefano Zampini /*@C
2440637a0070SStefano Zampini    MatCreateDenseCUDA - Creates a matrix in dense format using CUDA.
2441637a0070SStefano Zampini 
2442637a0070SStefano Zampini    Collective
2443637a0070SStefano Zampini 
2444637a0070SStefano Zampini    Input Parameters:
2445637a0070SStefano Zampini +  comm - MPI communicator
2446637a0070SStefano Zampini .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2447637a0070SStefano Zampini .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
2448637a0070SStefano Zampini .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2449637a0070SStefano Zampini .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
2450637a0070SStefano Zampini -  data - optional location of GPU matrix data.  Set data=NULL for PETSc
2451637a0070SStefano Zampini    to control matrix memory allocation.
2452637a0070SStefano Zampini 
2453637a0070SStefano Zampini    Output Parameter:
2454637a0070SStefano Zampini .  A - the matrix
2455637a0070SStefano Zampini 
2456637a0070SStefano Zampini    Notes:
2457637a0070SStefano Zampini 
2458637a0070SStefano Zampini    Level: intermediate
2459637a0070SStefano Zampini 
2460db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateDense()`
2461637a0070SStefano Zampini @*/
2462637a0070SStefano Zampini PetscErrorCode  MatCreateDenseCUDA(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
2463637a0070SStefano Zampini {
2464637a0070SStefano Zampini   PetscFunctionBegin;
24659566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm,A));
2466637a0070SStefano Zampini   PetscValidLogicalCollectiveBool(*A,!!data,6);
24679566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A,m,n,M,N));
24686f08ad05SPierre Jolivet   PetscCall(MatSetType(*A,MATDENSECUDA));
24699566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseCUDASetPreallocation(*A,data));
24706f08ad05SPierre Jolivet   PetscCall(MatMPIDenseCUDASetPreallocation(*A,data));
2471637a0070SStefano Zampini   PetscFunctionReturn(0);
2472637a0070SStefano Zampini }
2473637a0070SStefano Zampini #endif
2474637a0070SStefano Zampini 
24756849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat A,MatDuplicateOption cpvalues,Mat *newmat)
24768965ea79SLois Curfman McInnes {
24778965ea79SLois Curfman McInnes   Mat            mat;
24783501a2bdSLois Curfman McInnes   Mat_MPIDense   *a,*oldmat = (Mat_MPIDense*)A->data;
24798965ea79SLois Curfman McInnes 
24803a40ed3dSBarry Smith   PetscFunctionBegin;
2481f4259b30SLisandro Dalcin   *newmat = NULL;
24829566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&mat));
24839566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(mat,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N));
24849566063dSJacob Faibussowitsch   PetscCall(MatSetType(mat,((PetscObject)A)->type_name));
2485834f8fabSBarry Smith   a       = (Mat_MPIDense*)mat->data;
24865aa7edbeSHong Zhang 
2487d5f3da31SBarry Smith   mat->factortype   = A->factortype;
2488c456f294SBarry Smith   mat->assembled    = PETSC_TRUE;
2489273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
24908965ea79SLois Curfman McInnes 
2491e0fa3b82SLois Curfman McInnes   mat->insertmode = NOT_SET_VALUES;
24923782ba37SSatish Balay   a->donotstash   = oldmat->donotstash;
2493e04c1aa4SHong Zhang 
24949566063dSJacob Faibussowitsch   PetscCall(PetscLayoutReference(A->rmap,&mat->rmap));
24959566063dSJacob Faibussowitsch   PetscCall(PetscLayoutReference(A->cmap,&mat->cmap));
24968965ea79SLois Curfman McInnes 
24979566063dSJacob Faibussowitsch   PetscCall(MatDuplicate(oldmat->A,cpvalues,&a->A));
24989566063dSJacob Faibussowitsch   PetscCall(PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A));
249901b82886SBarry Smith 
25008965ea79SLois Curfman McInnes   *newmat = mat;
25013a40ed3dSBarry Smith   PetscFunctionReturn(0);
25028965ea79SLois Curfman McInnes }
25038965ea79SLois Curfman McInnes 
2504eb91f321SVaclav Hapla PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer)
2505eb91f321SVaclav Hapla {
250687d5ce66SSatish Balay   PetscBool      isbinary;
250787d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
250887d5ce66SSatish Balay   PetscBool      ishdf5;
250987d5ce66SSatish Balay #endif
2510eb91f321SVaclav Hapla 
2511eb91f321SVaclav Hapla   PetscFunctionBegin;
2512eb91f321SVaclav Hapla   PetscValidHeaderSpecific(newMat,MAT_CLASSID,1);
2513eb91f321SVaclav Hapla   PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2);
2514eb91f321SVaclav Hapla   /* force binary viewer to load .info file if it has not yet done so */
25159566063dSJacob Faibussowitsch   PetscCall(PetscViewerSetUp(viewer));
25169566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary));
251787d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
25189566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERHDF5,  &ishdf5));
251987d5ce66SSatish Balay #endif
2520eb91f321SVaclav Hapla   if (isbinary) {
25219566063dSJacob Faibussowitsch     PetscCall(MatLoad_Dense_Binary(newMat,viewer));
2522eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5)
252387d5ce66SSatish Balay   } else if (ishdf5) {
25249566063dSJacob Faibussowitsch     PetscCall(MatLoad_Dense_HDF5(newMat,viewer));
2525eb91f321SVaclav Hapla #endif
252698921bdaSJacob Faibussowitsch   } else SETERRQ(PetscObjectComm((PetscObject)newMat),PETSC_ERR_SUP,"Viewer type %s not yet supported for reading %s matrices",((PetscObject)viewer)->type_name,((PetscObject)newMat)->type_name);
2527eb91f321SVaclav Hapla   PetscFunctionReturn(0);
2528eb91f321SVaclav Hapla }
2529eb91f321SVaclav Hapla 
25306718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat A,Mat B,PetscBool *flag)
25316e4ee0c6SHong Zhang {
25326e4ee0c6SHong Zhang   Mat_MPIDense   *matB = (Mat_MPIDense*)B->data,*matA = (Mat_MPIDense*)A->data;
25336e4ee0c6SHong Zhang   Mat            a,b;
253490ace30eSBarry Smith 
25356e4ee0c6SHong Zhang   PetscFunctionBegin;
25366e4ee0c6SHong Zhang   a    = matA->A;
25376e4ee0c6SHong Zhang   b    = matB->A;
25382cf15c64SPierre Jolivet   PetscCall(MatEqual(a,b,flag));
25392cf15c64SPierre Jolivet   PetscCall(MPIU_Allreduce(MPI_IN_PLACE,flag,1,MPIU_BOOL,MPI_LAND,PetscObjectComm((PetscObject)A)));
25406e4ee0c6SHong Zhang   PetscFunctionReturn(0);
25416e4ee0c6SHong Zhang }
254290ace30eSBarry Smith 
25436718818eSStefano Zampini PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data)
2544baa3c1c6SHong Zhang {
25456718818eSStefano Zampini   Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data;
2546baa3c1c6SHong Zhang 
2547baa3c1c6SHong Zhang   PetscFunctionBegin;
25489566063dSJacob Faibussowitsch   PetscCall(PetscFree2(atb->sendbuf,atb->recvcounts));
25499566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&atb->atb));
25509566063dSJacob Faibussowitsch   PetscCall(PetscFree(atb));
2551baa3c1c6SHong Zhang   PetscFunctionReturn(0);
2552baa3c1c6SHong Zhang }
2553baa3c1c6SHong Zhang 
25546718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data)
2555cc48ffa7SToby Isaac {
25566718818eSStefano Zampini   Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data;
2557cc48ffa7SToby Isaac 
2558cc48ffa7SToby Isaac   PetscFunctionBegin;
25599566063dSJacob Faibussowitsch   PetscCall(PetscFree2(abt->buf[0],abt->buf[1]));
25609566063dSJacob Faibussowitsch   PetscCall(PetscFree2(abt->recvcounts,abt->recvdispls));
25619566063dSJacob Faibussowitsch   PetscCall(PetscFree(abt));
2562cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2563cc48ffa7SToby Isaac }
2564cc48ffa7SToby Isaac 
25656718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2566cb20be35SHong Zhang {
2567baa3c1c6SHong Zhang   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
25686718818eSStefano Zampini   Mat_TransMatMultDense *atb;
2569cb20be35SHong Zhang   MPI_Comm              comm;
25706718818eSStefano Zampini   PetscMPIInt           size,*recvcounts;
25716718818eSStefano Zampini   PetscScalar           *carray,*sendbuf;
2572637a0070SStefano Zampini   const PetscScalar     *atbarray;
2573a1f9a5e6SStefano Zampini   PetscInt              i,cN=C->cmap->N,proc,k,j,lda;
2574e68c0b26SHong Zhang   const PetscInt        *ranges;
2575cb20be35SHong Zhang 
2576cb20be35SHong Zhang   PetscFunctionBegin;
25776718818eSStefano Zampini   MatCheckProduct(C,3);
25785f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
25796718818eSStefano Zampini   atb = (Mat_TransMatMultDense *)C->product->data;
25806718818eSStefano Zampini   recvcounts = atb->recvcounts;
25816718818eSStefano Zampini   sendbuf = atb->sendbuf;
25826718818eSStefano Zampini 
25839566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
25849566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
2585e68c0b26SHong Zhang 
2586c5ef1628SHong Zhang   /* compute atbarray = aseq^T * bseq */
25879566063dSJacob Faibussowitsch   PetscCall(MatTransposeMatMult(a->A,b->A,atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX,PETSC_DEFAULT,&atb->atb));
2588cb20be35SHong Zhang 
25899566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(C,&ranges));
2590cb20be35SHong Zhang 
2591660d5466SHong Zhang   /* arrange atbarray into sendbuf */
25929566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(atb->atb,&atbarray));
25939566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(atb->atb,&lda));
2594637a0070SStefano Zampini   for (proc=0, k=0; proc<size; proc++) {
2595baa3c1c6SHong Zhang     for (j=0; j<cN; j++) {
2596a1f9a5e6SStefano Zampini       for (i=ranges[proc]; i<ranges[proc+1]; i++) sendbuf[k++] = atbarray[i+j*lda];
2597cb20be35SHong Zhang     }
2598cb20be35SHong Zhang   }
25999566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(atb->atb,&atbarray));
2600637a0070SStefano Zampini 
2601c5ef1628SHong Zhang   /* sum all atbarray to local values of C */
26029566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A,&carray));
26039566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Reduce_scatter(sendbuf,carray,recvcounts,MPIU_SCALAR,MPIU_SUM,comm));
26049566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A,&carray));
26059566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
26069566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2607cb20be35SHong Zhang   PetscFunctionReturn(0);
2608cb20be35SHong Zhang }
2609cb20be35SHong Zhang 
26106718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2611cb20be35SHong Zhang {
2612cb20be35SHong Zhang   MPI_Comm              comm;
2613baa3c1c6SHong Zhang   PetscMPIInt           size;
2614660d5466SHong Zhang   PetscInt              cm=A->cmap->n,cM,cN=B->cmap->N;
2615baa3c1c6SHong Zhang   Mat_TransMatMultDense *atb;
26166718818eSStefano Zampini   PetscBool             cisdense;
26170acaeb71SStefano Zampini   PetscInt              i;
26180acaeb71SStefano Zampini   const PetscInt        *ranges;
2619cb20be35SHong Zhang 
2620cb20be35SHong Zhang   PetscFunctionBegin;
26216718818eSStefano Zampini   MatCheckProduct(C,3);
26225f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
26239566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
2624cb20be35SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) {
262598921bdaSJacob Faibussowitsch     SETERRQ(comm,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2626cb20be35SHong Zhang   }
2627cb20be35SHong Zhang 
26284222ddf1SHong Zhang   /* create matrix product C */
26299566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C,cm,B->cmap->n,A->cmap->N,B->cmap->N));
26309566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompareAny((PetscObject)C,&cisdense,MATMPIDENSE,MATMPIDENSECUDA,""));
26316718818eSStefano Zampini   if (!cisdense) {
26329566063dSJacob Faibussowitsch     PetscCall(MatSetType(C,((PetscObject)A)->type_name));
26336718818eSStefano Zampini   }
26349566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
2635baa3c1c6SHong Zhang 
26364222ddf1SHong Zhang   /* create data structure for reuse C */
26379566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
26389566063dSJacob Faibussowitsch   PetscCall(PetscNew(&atb));
26394222ddf1SHong Zhang   cM   = C->rmap->N;
26409566063dSJacob Faibussowitsch   PetscCall(PetscMalloc2(cM*cN,&atb->sendbuf,size,&atb->recvcounts));
26419566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(C,&ranges));
26420acaeb71SStefano Zampini   for (i=0; i<size; i++) atb->recvcounts[i] = (ranges[i+1] - ranges[i])*cN;
2643baa3c1c6SHong Zhang 
26446718818eSStefano Zampini   C->product->data    = atb;
26456718818eSStefano Zampini   C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense;
2646cb20be35SHong Zhang   PetscFunctionReturn(0);
2647cb20be35SHong Zhang }
2648cb20be35SHong Zhang 
26494222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C)
2650cb20be35SHong Zhang {
2651cc48ffa7SToby Isaac   MPI_Comm              comm;
2652cc48ffa7SToby Isaac   PetscMPIInt           i, size;
2653cc48ffa7SToby Isaac   PetscInt              maxRows, bufsiz;
2654cc48ffa7SToby Isaac   PetscMPIInt           tag;
26554222ddf1SHong Zhang   PetscInt              alg;
2656cc48ffa7SToby Isaac   Mat_MatTransMultDense *abt;
26574222ddf1SHong Zhang   Mat_Product           *product = C->product;
26584222ddf1SHong Zhang   PetscBool             flg;
2659cc48ffa7SToby Isaac 
2660cc48ffa7SToby Isaac   PetscFunctionBegin;
26616718818eSStefano Zampini   MatCheckProduct(C,4);
26625f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
26634222ddf1SHong Zhang   /* check local size of A and B */
26645f80ce2aSJacob Faibussowitsch   PetscCheck(A->cmap->n == B->cmap->n,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")",A->cmap->n,B->cmap->n);
2665cc48ffa7SToby Isaac 
26669566063dSJacob Faibussowitsch   PetscCall(PetscStrcmp(product->alg,"allgatherv",&flg));
2667637a0070SStefano Zampini   alg  = flg ? 0 : 1;
2668cc48ffa7SToby Isaac 
26694222ddf1SHong Zhang   /* setup matrix product C */
26709566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C,A->rmap->n,B->rmap->n,A->rmap->N,B->rmap->N));
26719566063dSJacob Faibussowitsch   PetscCall(MatSetType(C,MATMPIDENSE));
26729566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
26739566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetNewTag((PetscObject)C,&tag));
26744222ddf1SHong Zhang 
26754222ddf1SHong Zhang   /* create data structure for reuse C */
26769566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)C,&comm));
26779566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
26789566063dSJacob Faibussowitsch   PetscCall(PetscNew(&abt));
2679cc48ffa7SToby Isaac   abt->tag = tag;
2680faa55883SToby Isaac   abt->alg = alg;
2681faa55883SToby Isaac   switch (alg) {
26824222ddf1SHong Zhang   case 1: /* alg: "cyclic" */
2683cc48ffa7SToby Isaac     for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i]));
2684cc48ffa7SToby Isaac     bufsiz = A->cmap->N * maxRows;
26859566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(bufsiz,&(abt->buf[0]),bufsiz,&(abt->buf[1])));
2686faa55883SToby Isaac     break;
26874222ddf1SHong Zhang   default: /* alg: "allgatherv" */
26889566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &(abt->buf[0]), B->rmap->N * B->cmap->N, &(abt->buf[1])));
26899566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(size,&(abt->recvcounts),size+1,&(abt->recvdispls)));
2690faa55883SToby Isaac     for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N;
2691faa55883SToby Isaac     for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i];
2692faa55883SToby Isaac     break;
2693faa55883SToby Isaac   }
2694cc48ffa7SToby Isaac 
26956718818eSStefano Zampini   C->product->data    = abt;
26966718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense;
26974222ddf1SHong Zhang   C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense;
2698cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2699cc48ffa7SToby Isaac }
2700cc48ffa7SToby Isaac 
2701faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C)
2702cc48ffa7SToby Isaac {
2703cc48ffa7SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
27046718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2705cc48ffa7SToby Isaac   MPI_Comm              comm;
2706cc48ffa7SToby Isaac   PetscMPIInt           rank,size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom;
2707f4259b30SLisandro Dalcin   PetscScalar           *sendbuf, *recvbuf=NULL, *cv;
2708cc48ffa7SToby Isaac   PetscInt              i,cK=A->cmap->N,k,j,bn;
2709cc48ffa7SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2710637a0070SStefano Zampini   const PetscScalar     *av,*bv;
271123fff9afSBarry Smith   PetscBLASInt          cm, cn, ck, alda, blda = 0, clda;
2712cc48ffa7SToby Isaac   MPI_Request           reqs[2];
2713cc48ffa7SToby Isaac   const PetscInt        *ranges;
2714cc48ffa7SToby Isaac 
2715cc48ffa7SToby Isaac   PetscFunctionBegin;
27166718818eSStefano Zampini   MatCheckProduct(C,3);
27175f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
27186718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
27199566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)C,&comm));
27209566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_rank(comm,&rank));
27219566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
27229566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&av));
27239566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(b->A,&bv));
27249566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A,&cv));
27259566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&i));
27269566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&alda));
27279566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(b->A,&i));
27289566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&blda));
27299566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(c->A,&i));
27309566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&clda));
27319566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(B,&ranges));
2732cc48ffa7SToby Isaac   bn   = B->rmap->n;
2733637a0070SStefano Zampini   if (blda == bn) {
2734637a0070SStefano Zampini     sendbuf = (PetscScalar*)bv;
2735cc48ffa7SToby Isaac   } else {
2736cc48ffa7SToby Isaac     sendbuf = abt->buf[0];
2737cc48ffa7SToby Isaac     for (k = 0, i = 0; i < cK; i++) {
2738cc48ffa7SToby Isaac       for (j = 0; j < bn; j++, k++) {
2739637a0070SStefano Zampini         sendbuf[k] = bv[i * blda + j];
2740cc48ffa7SToby Isaac       }
2741cc48ffa7SToby Isaac     }
2742cc48ffa7SToby Isaac   }
2743cc48ffa7SToby Isaac   if (size > 1) {
2744cc48ffa7SToby Isaac     sendto = (rank + size - 1) % size;
2745cc48ffa7SToby Isaac     recvfrom = (rank + size + 1) % size;
2746cc48ffa7SToby Isaac   } else {
2747cc48ffa7SToby Isaac     sendto = recvfrom = 0;
2748cc48ffa7SToby Isaac   }
27499566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(cK,&ck));
27509566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->rmap->n,&cm));
2751cc48ffa7SToby Isaac   recvisfrom = rank;
2752cc48ffa7SToby Isaac   for (i = 0; i < size; i++) {
2753cc48ffa7SToby Isaac     /* we have finished receiving in sending, bufs can be read/modified */
2754cc48ffa7SToby Isaac     PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */
2755cc48ffa7SToby Isaac     PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom];
2756cc48ffa7SToby Isaac 
2757cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2758cc48ffa7SToby Isaac       /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */
2759cc48ffa7SToby Isaac       sendsiz = cK * bn;
2760cc48ffa7SToby Isaac       recvsiz = cK * nextbn;
2761cc48ffa7SToby Isaac       recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1];
27629566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0]));
27639566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1]));
2764cc48ffa7SToby Isaac     }
2765cc48ffa7SToby Isaac 
2766cc48ffa7SToby Isaac     /* local aseq * sendbuf^T */
27679566063dSJacob Faibussowitsch     PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn));
276850ce3c9cSStefano Zampini     if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","T",&cm,&cn,&ck,&_DOne,av,&alda,sendbuf,&cn,&_DZero,cv + clda * ranges[recvisfrom],&clda));
2769cc48ffa7SToby Isaac 
2770cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2771cc48ffa7SToby Isaac       /* wait for the sends and receives to complete, swap sendbuf and recvbuf */
27729566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE));
2773cc48ffa7SToby Isaac     }
2774cc48ffa7SToby Isaac     bn = nextbn;
2775cc48ffa7SToby Isaac     recvisfrom = nextrecvisfrom;
2776cc48ffa7SToby Isaac     sendbuf = recvbuf;
2777cc48ffa7SToby Isaac   }
27789566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&av));
27799566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A,&bv));
27809566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A,&cv));
27819566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
27829566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2783cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2784cc48ffa7SToby Isaac }
2785cc48ffa7SToby Isaac 
2786faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C)
2787faa55883SToby Isaac {
2788faa55883SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
27896718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2790faa55883SToby Isaac   MPI_Comm              comm;
2791637a0070SStefano Zampini   PetscMPIInt           size;
2792637a0070SStefano Zampini   PetscScalar           *cv, *sendbuf, *recvbuf;
2793637a0070SStefano Zampini   const PetscScalar     *av,*bv;
2794637a0070SStefano Zampini   PetscInt              blda,i,cK=A->cmap->N,k,j,bn;
2795faa55883SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2796637a0070SStefano Zampini   PetscBLASInt          cm, cn, ck, alda, clda;
2797faa55883SToby Isaac 
2798faa55883SToby Isaac   PetscFunctionBegin;
27996718818eSStefano Zampini   MatCheckProduct(C,3);
28005f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
28016718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
28029566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
28039566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
28049566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&av));
28059566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(b->A,&bv));
28069566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A,&cv));
28079566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&i));
28089566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&alda));
28099566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(b->A,&blda));
28109566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(c->A,&i));
28119566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&clda));
2812faa55883SToby Isaac   /* copy transpose of B into buf[0] */
2813faa55883SToby Isaac   bn      = B->rmap->n;
2814faa55883SToby Isaac   sendbuf = abt->buf[0];
2815faa55883SToby Isaac   recvbuf = abt->buf[1];
2816faa55883SToby Isaac   for (k = 0, j = 0; j < bn; j++) {
2817faa55883SToby Isaac     for (i = 0; i < cK; i++, k++) {
2818637a0070SStefano Zampini       sendbuf[k] = bv[i * blda + j];
2819faa55883SToby Isaac     }
2820faa55883SToby Isaac   }
28219566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A,&bv));
28229566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm));
28239566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(cK,&ck));
28249566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->rmap->n,&cm));
28259566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->cmap->n,&cn));
282650ce3c9cSStefano Zampini   if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","N",&cm,&cn,&ck,&_DOne,av,&alda,recvbuf,&ck,&_DZero,cv,&clda));
28279566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&av));
28289566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A,&bv));
28299566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A,&cv));
28309566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
28319566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2832faa55883SToby Isaac   PetscFunctionReturn(0);
2833faa55883SToby Isaac }
2834faa55883SToby Isaac 
2835faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C)
2836faa55883SToby Isaac {
28376718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2838faa55883SToby Isaac 
2839faa55883SToby Isaac   PetscFunctionBegin;
28406718818eSStefano Zampini   MatCheckProduct(C,3);
28415f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
28426718818eSStefano Zampini   abt = (Mat_MatTransMultDense*)C->product->data;
2843faa55883SToby Isaac   switch (abt->alg) {
2844faa55883SToby Isaac   case 1:
28459566063dSJacob Faibussowitsch     PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C));
2846faa55883SToby Isaac     break;
2847faa55883SToby Isaac   default:
28489566063dSJacob Faibussowitsch     PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C));
2849faa55883SToby Isaac     break;
2850faa55883SToby Isaac   }
2851faa55883SToby Isaac   PetscFunctionReturn(0);
2852faa55883SToby Isaac }
2853faa55883SToby Isaac 
28546718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data)
2855320f2790SHong Zhang {
28566718818eSStefano Zampini   Mat_MatMultDense *ab = (Mat_MatMultDense*)data;
2857320f2790SHong Zhang 
2858320f2790SHong Zhang   PetscFunctionBegin;
28599566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Ce));
28609566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Ae));
28619566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Be));
28629566063dSJacob Faibussowitsch   PetscCall(PetscFree(ab));
2863320f2790SHong Zhang   PetscFunctionReturn(0);
2864320f2790SHong Zhang }
2865320f2790SHong Zhang 
28665242a7b1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
2867320f2790SHong Zhang PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2868320f2790SHong Zhang {
28696718818eSStefano Zampini   Mat_MatMultDense *ab;
2870320f2790SHong Zhang 
2871320f2790SHong Zhang   PetscFunctionBegin;
28726718818eSStefano Zampini   MatCheckProduct(C,3);
28735f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing product data");
28746718818eSStefano Zampini   ab   = (Mat_MatMultDense*)C->product->data;
28759566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_Elemental(A,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Ae));
28769566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_Elemental(B,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Be));
28779566063dSJacob Faibussowitsch   PetscCall(MatMatMultNumeric_Elemental(ab->Ae,ab->Be,ab->Ce));
28789566063dSJacob Faibussowitsch   PetscCall(MatConvert(ab->Ce,MATMPIDENSE,MAT_REUSE_MATRIX,&C));
2879320f2790SHong Zhang   PetscFunctionReturn(0);
2880320f2790SHong Zhang }
2881320f2790SHong Zhang 
28826718818eSStefano Zampini static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2883320f2790SHong Zhang {
2884320f2790SHong Zhang   Mat              Ae,Be,Ce;
2885320f2790SHong Zhang   Mat_MatMultDense *ab;
2886320f2790SHong Zhang 
2887320f2790SHong Zhang   PetscFunctionBegin;
28886718818eSStefano Zampini   MatCheckProduct(C,4);
28895f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
28904222ddf1SHong Zhang   /* check local size of A and B */
2891320f2790SHong Zhang   if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend) {
289298921bdaSJacob Faibussowitsch     SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2893320f2790SHong Zhang   }
2894320f2790SHong Zhang 
28954222ddf1SHong Zhang   /* create elemental matrices Ae and Be */
28969566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &Ae));
28979566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(Ae,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N));
28989566063dSJacob Faibussowitsch   PetscCall(MatSetType(Ae,MATELEMENTAL));
28999566063dSJacob Faibussowitsch   PetscCall(MatSetUp(Ae));
29009566063dSJacob Faibussowitsch   PetscCall(MatSetOption(Ae,MAT_ROW_ORIENTED,PETSC_FALSE));
2901320f2790SHong Zhang 
29029566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &Be));
29039566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(Be,PETSC_DECIDE,PETSC_DECIDE,B->rmap->N,B->cmap->N));
29049566063dSJacob Faibussowitsch   PetscCall(MatSetType(Be,MATELEMENTAL));
29059566063dSJacob Faibussowitsch   PetscCall(MatSetUp(Be));
29069566063dSJacob Faibussowitsch   PetscCall(MatSetOption(Be,MAT_ROW_ORIENTED,PETSC_FALSE));
2907320f2790SHong Zhang 
29084222ddf1SHong Zhang   /* compute symbolic Ce = Ae*Be */
29099566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)C),&Ce));
29109566063dSJacob Faibussowitsch   PetscCall(MatMatMultSymbolic_Elemental(Ae,Be,fill,Ce));
29114222ddf1SHong Zhang 
29124222ddf1SHong Zhang   /* setup C */
29139566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C,A->rmap->n,B->cmap->n,PETSC_DECIDE,PETSC_DECIDE));
29149566063dSJacob Faibussowitsch   PetscCall(MatSetType(C,MATDENSE));
29159566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
2916320f2790SHong Zhang 
2917320f2790SHong Zhang   /* create data structure for reuse Cdense */
29189566063dSJacob Faibussowitsch   PetscCall(PetscNew(&ab));
2919320f2790SHong Zhang   ab->Ae = Ae;
2920320f2790SHong Zhang   ab->Be = Be;
2921320f2790SHong Zhang   ab->Ce = Ce;
29226718818eSStefano Zampini 
29236718818eSStefano Zampini   C->product->data    = ab;
29246718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense;
29254222ddf1SHong Zhang   C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense;
2926320f2790SHong Zhang   PetscFunctionReturn(0);
2927320f2790SHong Zhang }
29284222ddf1SHong Zhang #endif
29294222ddf1SHong Zhang /* ----------------------------------------------- */
29304222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
29314222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C)
2932320f2790SHong Zhang {
2933320f2790SHong Zhang   PetscFunctionBegin;
29344222ddf1SHong Zhang   C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense;
29354222ddf1SHong Zhang   C->ops->productsymbolic = MatProductSymbolic_AB;
2936320f2790SHong Zhang   PetscFunctionReturn(0);
2937320f2790SHong Zhang }
29385242a7b1SHong Zhang #endif
293986aefd0dSHong Zhang 
29404222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C)
29414222ddf1SHong Zhang {
29424222ddf1SHong Zhang   Mat_Product *product = C->product;
29434222ddf1SHong Zhang   Mat         A = product->A,B=product->B;
29444222ddf1SHong Zhang 
29454222ddf1SHong Zhang   PetscFunctionBegin;
29464222ddf1SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend)
294798921bdaSJacob Faibussowitsch     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
29486718818eSStefano Zampini   C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense;
29496718818eSStefano Zampini   C->ops->productsymbolic = MatProductSymbolic_AtB;
29504222ddf1SHong Zhang   PetscFunctionReturn(0);
29514222ddf1SHong Zhang }
29524222ddf1SHong Zhang 
29534222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C)
29544222ddf1SHong Zhang {
29554222ddf1SHong Zhang   Mat_Product    *product = C->product;
29564222ddf1SHong Zhang   const char     *algTypes[2] = {"allgatherv","cyclic"};
29574222ddf1SHong Zhang   PetscInt       alg,nalg = 2;
29584222ddf1SHong Zhang   PetscBool      flg = PETSC_FALSE;
29594222ddf1SHong Zhang 
29604222ddf1SHong Zhang   PetscFunctionBegin;
29614222ddf1SHong Zhang   /* Set default algorithm */
29624222ddf1SHong Zhang   alg = 0; /* default is allgatherv */
29639566063dSJacob Faibussowitsch   PetscCall(PetscStrcmp(product->alg,"default",&flg));
29644222ddf1SHong Zhang   if (flg) {
29659566063dSJacob Faibussowitsch     PetscCall(MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]));
29664222ddf1SHong Zhang   }
29674222ddf1SHong Zhang 
29684222ddf1SHong Zhang   /* Get runtime option */
29694222ddf1SHong Zhang   if (product->api_user) {
2970d0609cedSBarry Smith     PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatMatTransposeMult","Mat");
29719566063dSJacob Faibussowitsch     PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via","Algorithmic approach","MatMatTransposeMult",algTypes,nalg,algTypes[alg],&alg,&flg));
2972d0609cedSBarry Smith     PetscOptionsEnd();
29734222ddf1SHong Zhang   } else {
2974d0609cedSBarry Smith     PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatProduct_ABt","Mat");
29759566063dSJacob Faibussowitsch     PetscCall(PetscOptionsEList("-mat_product_algorithm","Algorithmic approach","MatProduct_ABt",algTypes,nalg,algTypes[alg],&alg,&flg));
2976d0609cedSBarry Smith     PetscOptionsEnd();
29774222ddf1SHong Zhang   }
29784222ddf1SHong Zhang   if (flg) {
29799566063dSJacob Faibussowitsch     PetscCall(MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]));
29804222ddf1SHong Zhang   }
29814222ddf1SHong Zhang 
29824222ddf1SHong Zhang   C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense;
29834222ddf1SHong Zhang   C->ops->productsymbolic          = MatProductSymbolic_ABt;
29844222ddf1SHong Zhang   PetscFunctionReturn(0);
29854222ddf1SHong Zhang }
29864222ddf1SHong Zhang 
29874222ddf1SHong Zhang PETSC_INTERN PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C)
29884222ddf1SHong Zhang {
29894222ddf1SHong Zhang   Mat_Product    *product = C->product;
29904222ddf1SHong Zhang 
29914222ddf1SHong Zhang   PetscFunctionBegin;
29924222ddf1SHong Zhang   switch (product->type) {
29934222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
29944222ddf1SHong Zhang   case MATPRODUCT_AB:
29959566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_MPIDense_AB(C));
29964222ddf1SHong Zhang     break;
29974222ddf1SHong Zhang #endif
29984222ddf1SHong Zhang   case MATPRODUCT_AtB:
29999566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_MPIDense_AtB(C));
30004222ddf1SHong Zhang     break;
30014222ddf1SHong Zhang   case MATPRODUCT_ABt:
30029566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_MPIDense_ABt(C));
30034222ddf1SHong Zhang     break;
30046718818eSStefano Zampini   default:
30056718818eSStefano Zampini     break;
30064222ddf1SHong Zhang   }
30074222ddf1SHong Zhang   PetscFunctionReturn(0);
30084222ddf1SHong Zhang }
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