xref: /petsc/src/mat/impls/dense/mpi/mpidense.c (revision 2f605a994c568b341eedf7d10867052a20765ec2)
1be1d678aSKris Buschelman 
2ed3cc1f0SBarry Smith /*
3ed3cc1f0SBarry Smith    Basic functions for basic parallel dense matrices.
4ed3cc1f0SBarry Smith */
5ed3cc1f0SBarry Smith 
6c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h>    /*I   "petscmat.h"  I*/
78949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h>
8baa3c1c6SHong Zhang #include <petscblaslapack.h>
98965ea79SLois Curfman McInnes 
10ab92ecdeSBarry Smith /*@
11ab92ecdeSBarry Smith 
12ab92ecdeSBarry Smith       MatDenseGetLocalMatrix - For a MATMPIDENSE or MATSEQDENSE matrix returns the sequential
13ab92ecdeSBarry Smith               matrix that represents the operator. For sequential matrices it returns itself.
14ab92ecdeSBarry Smith 
15ab92ecdeSBarry Smith     Input Parameter:
16ab92ecdeSBarry Smith .      A - the Seq or MPI dense matrix
17ab92ecdeSBarry Smith 
18ab92ecdeSBarry Smith     Output Parameter:
19ab92ecdeSBarry Smith .      B - the inner matrix
20ab92ecdeSBarry Smith 
218e6c10adSSatish Balay     Level: intermediate
228e6c10adSSatish Balay 
23ab92ecdeSBarry Smith @*/
24ab92ecdeSBarry Smith PetscErrorCode MatDenseGetLocalMatrix(Mat A,Mat *B)
25ab92ecdeSBarry Smith {
26ab92ecdeSBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
27ace3abfcSBarry Smith   PetscBool      flg;
28ab92ecdeSBarry Smith 
29ab92ecdeSBarry Smith   PetscFunctionBegin;
30d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
31d5ea218eSStefano Zampini   PetscValidPointer(B,2);
329566063dSJacob Faibussowitsch   PetscCall(PetscObjectBaseTypeCompare((PetscObject)A,MATMPIDENSE,&flg));
332205254eSKarl Rupp   if (flg) *B = mat->A;
34f140bc17SStefano Zampini   else {
359566063dSJacob Faibussowitsch     PetscCall(PetscObjectBaseTypeCompare((PetscObject)A,MATSEQDENSE,&flg));
3628b400f6SJacob Faibussowitsch     PetscCheck(flg,PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Not for matrix type %s",((PetscObject)A)->type_name);
37f140bc17SStefano Zampini     *B = A;
38f140bc17SStefano Zampini   }
39ab92ecdeSBarry Smith   PetscFunctionReturn(0);
40ab92ecdeSBarry Smith }
41ab92ecdeSBarry Smith 
42a76f77c3SStefano Zampini PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s)
43a76f77c3SStefano Zampini {
44a76f77c3SStefano Zampini   Mat_MPIDense   *Amat = (Mat_MPIDense*)A->data;
45a76f77c3SStefano Zampini   Mat_MPIDense   *Bmat = (Mat_MPIDense*)B->data;
46a76f77c3SStefano Zampini 
47a76f77c3SStefano Zampini   PetscFunctionBegin;
489566063dSJacob Faibussowitsch   PetscCall(MatCopy(Amat->A,Bmat->A,s));
49a76f77c3SStefano Zampini   PetscFunctionReturn(0);
50a76f77c3SStefano Zampini }
51a76f77c3SStefano Zampini 
52*2f605a99SJose E. Roman PetscErrorCode MatShift_MPIDense(Mat A,PetscScalar alpha)
53*2f605a99SJose E. Roman {
54*2f605a99SJose E. Roman   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
55*2f605a99SJose E. Roman   PetscInt       j,lda,rstart = A->rmap->rstart,rend = A->rmap->rend,rend2;
56*2f605a99SJose E. Roman   PetscScalar    *v;
57*2f605a99SJose E. Roman 
58*2f605a99SJose E. Roman   PetscFunctionBegin;
59*2f605a99SJose E. Roman   PetscCall(MatDenseGetArray(mat->A,&v));
60*2f605a99SJose E. Roman   PetscCall(MatDenseGetLDA(mat->A,&lda));
61*2f605a99SJose E. Roman   rend2 = PetscMin(rend,A->cmap->N);
62*2f605a99SJose E. Roman   if (rend2>rstart) {
63*2f605a99SJose E. Roman     for (j=rstart; j<rend2; j++) v[j-rstart+j*lda] += alpha;
64*2f605a99SJose E. Roman     PetscCall(PetscLogFlops(rend2-rstart));
65*2f605a99SJose E. Roman   }
66*2f605a99SJose E. Roman   PetscCall(MatDenseRestoreArray(mat->A,&v));
67*2f605a99SJose E. Roman   PetscFunctionReturn(0);
68*2f605a99SJose E. Roman }
69*2f605a99SJose E. Roman 
70ba8c8a56SBarry Smith PetscErrorCode MatGetRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
71ba8c8a56SBarry Smith {
72ba8c8a56SBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
73d0f46423SBarry Smith   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
74ba8c8a56SBarry Smith 
75ba8c8a56SBarry Smith   PetscFunctionBegin;
76aed4548fSBarry Smith   PetscCheck(row >= rstart && row < rend,PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
77ba8c8a56SBarry Smith   lrow = row - rstart;
789566063dSJacob Faibussowitsch   PetscCall(MatGetRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v));
79ba8c8a56SBarry Smith   PetscFunctionReturn(0);
80ba8c8a56SBarry Smith }
81ba8c8a56SBarry Smith 
82637a0070SStefano Zampini PetscErrorCode MatRestoreRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
83ba8c8a56SBarry Smith {
84637a0070SStefano Zampini   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
85637a0070SStefano Zampini   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
86ba8c8a56SBarry Smith 
87ba8c8a56SBarry Smith   PetscFunctionBegin;
88aed4548fSBarry Smith   PetscCheck(row >= rstart && row < rend,PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
89637a0070SStefano Zampini   lrow = row - rstart;
909566063dSJacob Faibussowitsch   PetscCall(MatRestoreRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v));
91ba8c8a56SBarry Smith   PetscFunctionReturn(0);
92ba8c8a56SBarry Smith }
93ba8c8a56SBarry Smith 
9411bd1e4dSLisandro Dalcin PetscErrorCode  MatGetDiagonalBlock_MPIDense(Mat A,Mat *a)
950de54da6SSatish Balay {
960de54da6SSatish Balay   Mat_MPIDense   *mdn = (Mat_MPIDense*)A->data;
97d0f46423SBarry Smith   PetscInt       m = A->rmap->n,rstart = A->rmap->rstart;
9887828ca2SBarry Smith   PetscScalar    *array;
990de54da6SSatish Balay   MPI_Comm       comm;
1004b6ae80fSStefano Zampini   PetscBool      flg;
10111bd1e4dSLisandro Dalcin   Mat            B;
1020de54da6SSatish Balay 
1030de54da6SSatish Balay   PetscFunctionBegin;
1049566063dSJacob Faibussowitsch   PetscCall(MatHasCongruentLayouts(A,&flg));
10528b400f6SJacob Faibussowitsch   PetscCheck(flg,PETSC_COMM_SELF,PETSC_ERR_SUP,"Only square matrices supported.");
1069566063dSJacob Faibussowitsch   PetscCall(PetscObjectQuery((PetscObject)A,"DiagonalBlock",(PetscObject*)&B));
107616b8fbbSStefano Zampini   if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */
1084b6ae80fSStefano Zampini 
1099566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A,MATSEQDENSECUDA,&flg));
11028b400f6SJacob Faibussowitsch     PetscCheck(!flg,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature",MATSEQDENSECUDA);
1119566063dSJacob Faibussowitsch     PetscCall(PetscObjectGetComm((PetscObject)(mdn->A),&comm));
1129566063dSJacob Faibussowitsch     PetscCall(MatCreate(comm,&B));
1139566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B,m,m,m,m));
1149566063dSJacob Faibussowitsch     PetscCall(MatSetType(B,((PetscObject)mdn->A)->type_name));
1159566063dSJacob Faibussowitsch     PetscCall(MatDenseGetArrayRead(mdn->A,(const PetscScalar**)&array));
1169566063dSJacob Faibussowitsch     PetscCall(MatSeqDenseSetPreallocation(B,array+m*rstart));
1179566063dSJacob Faibussowitsch     PetscCall(MatDenseRestoreArrayRead(mdn->A,(const PetscScalar**)&array));
1189566063dSJacob Faibussowitsch     PetscCall(PetscObjectCompose((PetscObject)A,"DiagonalBlock",(PetscObject)B));
11911bd1e4dSLisandro Dalcin     *a   = B;
1209566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&B));
1212205254eSKarl Rupp   } else *a = B;
1220de54da6SSatish Balay   PetscFunctionReturn(0);
1230de54da6SSatish Balay }
1240de54da6SSatish Balay 
12513f74950SBarry Smith PetscErrorCode MatSetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],const PetscScalar v[],InsertMode addv)
1268965ea79SLois Curfman McInnes {
12739b7565bSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)mat->data;
128d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
129ace3abfcSBarry Smith   PetscBool      roworiented = A->roworiented;
1308965ea79SLois Curfman McInnes 
1313a40ed3dSBarry Smith   PetscFunctionBegin;
1328965ea79SLois Curfman McInnes   for (i=0; i<m; i++) {
1335ef9f2a5SBarry Smith     if (idxm[i] < 0) continue;
13408401ef6SPierre Jolivet     PetscCheck(idxm[i] < mat->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
1358965ea79SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
1368965ea79SLois Curfman McInnes       row = idxm[i] - rstart;
13739b7565bSBarry Smith       if (roworiented) {
1389566063dSJacob Faibussowitsch         PetscCall(MatSetValues(A->A,1,&row,n,idxn,v+i*n,addv));
1393a40ed3dSBarry Smith       } else {
1408965ea79SLois Curfman McInnes         for (j=0; j<n; j++) {
1415ef9f2a5SBarry Smith           if (idxn[j] < 0) continue;
14208401ef6SPierre Jolivet           PetscCheck(idxn[j] < mat->cmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
1439566063dSJacob Faibussowitsch           PetscCall(MatSetValues(A->A,1,&row,1,&idxn[j],v+i+j*m,addv));
14439b7565bSBarry Smith         }
1458965ea79SLois Curfman McInnes       }
1462205254eSKarl Rupp     } else if (!A->donotstash) {
1475080c13bSMatthew G Knepley       mat->assembled = PETSC_FALSE;
14839b7565bSBarry Smith       if (roworiented) {
1499566063dSJacob Faibussowitsch         PetscCall(MatStashValuesRow_Private(&mat->stash,idxm[i],n,idxn,v+i*n,PETSC_FALSE));
150d36fbae8SSatish Balay       } else {
1519566063dSJacob Faibussowitsch         PetscCall(MatStashValuesCol_Private(&mat->stash,idxm[i],n,idxn,v+i,m,PETSC_FALSE));
15239b7565bSBarry Smith       }
153b49de8d1SLois Curfman McInnes     }
154b49de8d1SLois Curfman McInnes   }
1553a40ed3dSBarry Smith   PetscFunctionReturn(0);
156b49de8d1SLois Curfman McInnes }
157b49de8d1SLois Curfman McInnes 
15813f74950SBarry Smith PetscErrorCode MatGetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],PetscScalar v[])
159b49de8d1SLois Curfman McInnes {
160b49de8d1SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
161d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
162b49de8d1SLois Curfman McInnes 
1633a40ed3dSBarry Smith   PetscFunctionBegin;
164b49de8d1SLois Curfman McInnes   for (i=0; i<m; i++) {
16554c59aa7SJacob Faibussowitsch     if (idxm[i] < 0) continue; /* negative row */
16654c59aa7SJacob Faibussowitsch     PetscCheck(idxm[i] < mat->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
167b49de8d1SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
168b49de8d1SLois Curfman McInnes       row = idxm[i] - rstart;
169b49de8d1SLois Curfman McInnes       for (j=0; j<n; j++) {
17054c59aa7SJacob Faibussowitsch         if (idxn[j] < 0) continue; /* negative column */
17154c59aa7SJacob Faibussowitsch         PetscCheck(idxn[j] < mat->cmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
1729566063dSJacob Faibussowitsch         PetscCall(MatGetValues(mdn->A,1,&row,1,&idxn[j],v+i*n+j));
173b49de8d1SLois Curfman McInnes       }
174e7e72b3dSBarry Smith     } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only local values currently supported");
1758965ea79SLois Curfman McInnes   }
1763a40ed3dSBarry Smith   PetscFunctionReturn(0);
1778965ea79SLois Curfman McInnes }
1788965ea79SLois Curfman McInnes 
17949a6ff4bSBarry Smith static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A,PetscInt *lda)
18049a6ff4bSBarry Smith {
18149a6ff4bSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
18249a6ff4bSBarry Smith 
18349a6ff4bSBarry Smith   PetscFunctionBegin;
1849566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,lda));
18549a6ff4bSBarry Smith   PetscFunctionReturn(0);
18649a6ff4bSBarry Smith }
18749a6ff4bSBarry Smith 
188ad16ce7aSStefano Zampini static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A,PetscInt lda)
189ad16ce7aSStefano Zampini {
190ad16ce7aSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
19117359960SJose E. Roman   PetscBool      iscuda;
192ad16ce7aSStefano Zampini 
193ad16ce7aSStefano Zampini   PetscFunctionBegin;
19417359960SJose E. Roman   if (!a->A) {
19528b400f6SJacob Faibussowitsch     PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1969566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(A->rmap));
1979566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(A->cmap));
1989566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF,&a->A));
1999566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->A));
2009566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(a->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N));
2019566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda));
2029566063dSJacob Faibussowitsch     PetscCall(MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE));
20317359960SJose E. Roman   }
2049566063dSJacob Faibussowitsch   PetscCall(MatDenseSetLDA(a->A,lda));
205ad16ce7aSStefano Zampini   PetscFunctionReturn(0);
206ad16ce7aSStefano Zampini }
207ad16ce7aSStefano Zampini 
208637a0070SStefano Zampini static PetscErrorCode MatDenseGetArray_MPIDense(Mat A,PetscScalar **array)
209ff14e315SSatish Balay {
210ff14e315SSatish Balay   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
211ff14e315SSatish Balay 
2123a40ed3dSBarry Smith   PetscFunctionBegin;
21328b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2149566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(a->A,array));
2153a40ed3dSBarry Smith   PetscFunctionReturn(0);
216ff14e315SSatish Balay }
217ff14e315SSatish Balay 
218637a0070SStefano Zampini static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A,const PetscScalar **array)
2198572280aSBarry Smith {
2208572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2218572280aSBarry Smith 
2228572280aSBarry Smith   PetscFunctionBegin;
22328b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2249566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,array));
2258572280aSBarry Smith   PetscFunctionReturn(0);
2268572280aSBarry Smith }
2278572280aSBarry Smith 
2286947451fSStefano Zampini static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A,PetscScalar **array)
2296947451fSStefano Zampini {
2306947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2316947451fSStefano Zampini 
2326947451fSStefano Zampini   PetscFunctionBegin;
23328b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2349566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(a->A,array));
2356947451fSStefano Zampini   PetscFunctionReturn(0);
2366947451fSStefano Zampini }
2376947451fSStefano Zampini 
238637a0070SStefano Zampini static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A,const PetscScalar *array)
239d3042a70SBarry Smith {
240d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
241d3042a70SBarry Smith 
242d3042a70SBarry Smith   PetscFunctionBegin;
24328b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
24428b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2459566063dSJacob Faibussowitsch   PetscCall(MatDensePlaceArray(a->A,array));
246d3042a70SBarry Smith   PetscFunctionReturn(0);
247d3042a70SBarry Smith }
248d3042a70SBarry Smith 
249d3042a70SBarry Smith static PetscErrorCode MatDenseResetArray_MPIDense(Mat A)
250d3042a70SBarry Smith {
251d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
252d3042a70SBarry Smith 
253d3042a70SBarry Smith   PetscFunctionBegin;
25428b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
25528b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2569566063dSJacob Faibussowitsch   PetscCall(MatDenseResetArray(a->A));
257d3042a70SBarry Smith   PetscFunctionReturn(0);
258d3042a70SBarry Smith }
259d3042a70SBarry Smith 
260d5ea218eSStefano Zampini static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A,const PetscScalar *array)
261d5ea218eSStefano Zampini {
262d5ea218eSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
263d5ea218eSStefano Zampini 
264d5ea218eSStefano Zampini   PetscFunctionBegin;
26528b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
26628b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2679566063dSJacob Faibussowitsch   PetscCall(MatDenseReplaceArray(a->A,array));
268d5ea218eSStefano Zampini   PetscFunctionReturn(0);
269d5ea218eSStefano Zampini }
270d5ea218eSStefano Zampini 
2717dae84e0SHong Zhang static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B)
272ca3fa75bSLois Curfman McInnes {
273ca3fa75bSLois Curfman McInnes   Mat_MPIDense      *mat  = (Mat_MPIDense*)A->data,*newmatd;
274637a0070SStefano Zampini   PetscInt          lda,i,j,rstart,rend,nrows,ncols,Ncols,nlrows,nlcols;
2755d0c19d7SBarry Smith   const PetscInt    *irow,*icol;
276637a0070SStefano Zampini   const PetscScalar *v;
277637a0070SStefano Zampini   PetscScalar       *bv;
278ca3fa75bSLois Curfman McInnes   Mat               newmat;
2794aa3045dSJed Brown   IS                iscol_local;
28042a884f0SBarry Smith   MPI_Comm          comm_is,comm_mat;
281ca3fa75bSLois Curfman McInnes 
282ca3fa75bSLois Curfman McInnes   PetscFunctionBegin;
2839566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm_mat));
2849566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)iscol,&comm_is));
28508401ef6SPierre Jolivet   PetscCheck(comm_mat == comm_is,PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"IS communicator must match matrix communicator");
28642a884f0SBarry Smith 
2879566063dSJacob Faibussowitsch   PetscCall(ISAllGather(iscol,&iscol_local));
2889566063dSJacob Faibussowitsch   PetscCall(ISGetIndices(isrow,&irow));
2899566063dSJacob Faibussowitsch   PetscCall(ISGetIndices(iscol_local,&icol));
2909566063dSJacob Faibussowitsch   PetscCall(ISGetLocalSize(isrow,&nrows));
2919566063dSJacob Faibussowitsch   PetscCall(ISGetLocalSize(iscol,&ncols));
2929566063dSJacob Faibussowitsch   PetscCall(ISGetSize(iscol,&Ncols)); /* global number of columns, size of iscol_local */
293ca3fa75bSLois Curfman McInnes 
294ca3fa75bSLois Curfman McInnes   /* No parallel redistribution currently supported! Should really check each index set
2957eba5e9cSLois Curfman McInnes      to comfirm that it is OK.  ... Currently supports only submatrix same partitioning as
2967eba5e9cSLois Curfman McInnes      original matrix! */
297ca3fa75bSLois Curfman McInnes 
2989566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(A,&nlrows,&nlcols));
2999566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRange(A,&rstart,&rend));
300ca3fa75bSLois Curfman McInnes 
301ca3fa75bSLois Curfman McInnes   /* Check submatrix call */
302ca3fa75bSLois Curfman McInnes   if (scall == MAT_REUSE_MATRIX) {
303e32f2f54SBarry Smith     /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */
3047eba5e9cSLois Curfman McInnes     /* Really need to test rows and column sizes! */
305ca3fa75bSLois Curfman McInnes     newmat = *B;
306ca3fa75bSLois Curfman McInnes   } else {
307ca3fa75bSLois Curfman McInnes     /* Create and fill new matrix */
3089566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&newmat));
3099566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(newmat,nrows,ncols,PETSC_DECIDE,Ncols));
3109566063dSJacob Faibussowitsch     PetscCall(MatSetType(newmat,((PetscObject)A)->type_name));
3119566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(newmat,NULL));
312ca3fa75bSLois Curfman McInnes   }
313ca3fa75bSLois Curfman McInnes 
314ca3fa75bSLois Curfman McInnes   /* Now extract the data pointers and do the copy, column at a time */
315ca3fa75bSLois Curfman McInnes   newmatd = (Mat_MPIDense*)newmat->data;
3169566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(newmatd->A,&bv));
3179566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(mat->A,&v));
3189566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(mat->A,&lda));
3194aa3045dSJed Brown   for (i=0; i<Ncols; i++) {
320637a0070SStefano Zampini     const PetscScalar *av = v + lda*icol[i];
321ca3fa75bSLois Curfman McInnes     for (j=0; j<nrows; j++) {
3227eba5e9cSLois Curfman McInnes       *bv++ = av[irow[j] - rstart];
323ca3fa75bSLois Curfman McInnes     }
324ca3fa75bSLois Curfman McInnes   }
3259566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(mat->A,&v));
3269566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(newmatd->A,&bv));
327ca3fa75bSLois Curfman McInnes 
328ca3fa75bSLois Curfman McInnes   /* Assemble the matrices so that the correct flags are set */
3299566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(newmat,MAT_FINAL_ASSEMBLY));
3309566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(newmat,MAT_FINAL_ASSEMBLY));
331ca3fa75bSLois Curfman McInnes 
332ca3fa75bSLois Curfman McInnes   /* Free work space */
3339566063dSJacob Faibussowitsch   PetscCall(ISRestoreIndices(isrow,&irow));
3349566063dSJacob Faibussowitsch   PetscCall(ISRestoreIndices(iscol_local,&icol));
3359566063dSJacob Faibussowitsch   PetscCall(ISDestroy(&iscol_local));
336ca3fa75bSLois Curfman McInnes   *B   = newmat;
337ca3fa75bSLois Curfman McInnes   PetscFunctionReturn(0);
338ca3fa75bSLois Curfman McInnes }
339ca3fa75bSLois Curfman McInnes 
340637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A,PetscScalar **array)
341ff14e315SSatish Balay {
34273a71a0fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
34373a71a0fSBarry Smith 
3443a40ed3dSBarry Smith   PetscFunctionBegin;
3459566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(a->A,array));
3463a40ed3dSBarry Smith   PetscFunctionReturn(0);
347ff14e315SSatish Balay }
348ff14e315SSatish Balay 
349637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A,const PetscScalar **array)
3508572280aSBarry Smith {
3518572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3528572280aSBarry Smith 
3538572280aSBarry Smith   PetscFunctionBegin;
3549566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,array));
3558572280aSBarry Smith   PetscFunctionReturn(0);
3568572280aSBarry Smith }
3578572280aSBarry Smith 
3586947451fSStefano Zampini PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A,PetscScalar **array)
3596947451fSStefano Zampini {
3606947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3616947451fSStefano Zampini 
3626947451fSStefano Zampini   PetscFunctionBegin;
3639566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(a->A,array));
3646947451fSStefano Zampini   PetscFunctionReturn(0);
3656947451fSStefano Zampini }
3666947451fSStefano Zampini 
367dfbe8321SBarry Smith PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat,MatAssemblyType mode)
3688965ea79SLois Curfman McInnes {
36939ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
37013f74950SBarry Smith   PetscInt       nstash,reallocs;
3718965ea79SLois Curfman McInnes 
3723a40ed3dSBarry Smith   PetscFunctionBegin;
3734067683fSStefano Zampini   if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(0);
3748965ea79SLois Curfman McInnes 
3759566063dSJacob Faibussowitsch   PetscCall(MatStashScatterBegin_Private(mat,&mat->stash,mat->rmap->range));
3769566063dSJacob Faibussowitsch   PetscCall(MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs));
3779566063dSJacob Faibussowitsch   PetscCall(PetscInfo(mdn->A,"Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n",nstash,reallocs));
3783a40ed3dSBarry Smith   PetscFunctionReturn(0);
3798965ea79SLois Curfman McInnes }
3808965ea79SLois Curfman McInnes 
381dfbe8321SBarry Smith PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat,MatAssemblyType mode)
3828965ea79SLois Curfman McInnes {
38339ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn=(Mat_MPIDense*)mat->data;
38413f74950SBarry Smith   PetscInt       i,*row,*col,flg,j,rstart,ncols;
38513f74950SBarry Smith   PetscMPIInt    n;
38687828ca2SBarry Smith   PetscScalar    *val;
3878965ea79SLois Curfman McInnes 
3883a40ed3dSBarry Smith   PetscFunctionBegin;
389910cf402Sprj-   if (!mdn->donotstash && !mat->nooffprocentries) {
3908965ea79SLois Curfman McInnes     /*  wait on receives */
3917ef1d9bdSSatish Balay     while (1) {
3929566063dSJacob Faibussowitsch       PetscCall(MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg));
3937ef1d9bdSSatish Balay       if (!flg) break;
3948965ea79SLois Curfman McInnes 
3957ef1d9bdSSatish Balay       for (i=0; i<n;) {
3967ef1d9bdSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
3972205254eSKarl Rupp         for (j=i,rstart=row[j]; j<n; j++) {
3982205254eSKarl Rupp           if (row[j] != rstart) break;
3992205254eSKarl Rupp         }
4007ef1d9bdSSatish Balay         if (j < n) ncols = j-i;
4017ef1d9bdSSatish Balay         else       ncols = n-i;
4027ef1d9bdSSatish Balay         /* Now assemble all these values with a single function call */
4039566063dSJacob Faibussowitsch         PetscCall(MatSetValues_MPIDense(mat,1,row+i,ncols,col+i,val+i,mat->insertmode));
4047ef1d9bdSSatish Balay         i    = j;
4058965ea79SLois Curfman McInnes       }
4067ef1d9bdSSatish Balay     }
4079566063dSJacob Faibussowitsch     PetscCall(MatStashScatterEnd_Private(&mat->stash));
408910cf402Sprj-   }
4098965ea79SLois Curfman McInnes 
4109566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(mdn->A,mode));
4119566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(mdn->A,mode));
4123a40ed3dSBarry Smith   PetscFunctionReturn(0);
4138965ea79SLois Curfman McInnes }
4148965ea79SLois Curfman McInnes 
415dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_MPIDense(Mat A)
4168965ea79SLois Curfman McInnes {
41739ddd567SLois Curfman McInnes   Mat_MPIDense   *l = (Mat_MPIDense*)A->data;
4183a40ed3dSBarry Smith 
4193a40ed3dSBarry Smith   PetscFunctionBegin;
4209566063dSJacob Faibussowitsch   PetscCall(MatZeroEntries(l->A));
4213a40ed3dSBarry Smith   PetscFunctionReturn(0);
4228965ea79SLois Curfman McInnes }
4238965ea79SLois Curfman McInnes 
424637a0070SStefano Zampini PetscErrorCode MatZeroRows_MPIDense(Mat A,PetscInt n,const PetscInt rows[],PetscScalar diag,Vec x,Vec b)
4258965ea79SLois Curfman McInnes {
42639ddd567SLois Curfman McInnes   Mat_MPIDense      *l = (Mat_MPIDense*)A->data;
427637a0070SStefano Zampini   PetscInt          i,len,*lrows;
428637a0070SStefano Zampini 
429637a0070SStefano Zampini   PetscFunctionBegin;
430637a0070SStefano Zampini   /* get locally owned rows */
4319566063dSJacob Faibussowitsch   PetscCall(PetscLayoutMapLocal(A->rmap,n,rows,&len,&lrows,NULL));
432637a0070SStefano Zampini   /* fix right hand side if needed */
433637a0070SStefano Zampini   if (x && b) {
43497b48c8fSBarry Smith     const PetscScalar *xx;
43597b48c8fSBarry Smith     PetscScalar       *bb;
4368965ea79SLois Curfman McInnes 
4379566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(x, &xx));
4389566063dSJacob Faibussowitsch     PetscCall(VecGetArrayWrite(b, &bb));
439637a0070SStefano Zampini     for (i=0;i<len;++i) bb[lrows[i]] = diag*xx[lrows[i]];
4409566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(x, &xx));
4419566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayWrite(b, &bb));
44297b48c8fSBarry Smith   }
4439566063dSJacob Faibussowitsch   PetscCall(MatZeroRows(l->A,len,lrows,0.0,NULL,NULL));
444e2eb51b1SBarry Smith   if (diag != 0.0) {
445637a0070SStefano Zampini     Vec d;
446b9679d65SBarry Smith 
4479566063dSJacob Faibussowitsch     PetscCall(MatCreateVecs(A,NULL,&d));
4489566063dSJacob Faibussowitsch     PetscCall(VecSet(d,diag));
4499566063dSJacob Faibussowitsch     PetscCall(MatDiagonalSet(A,d,INSERT_VALUES));
4509566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&d));
451b9679d65SBarry Smith   }
4529566063dSJacob Faibussowitsch   PetscCall(PetscFree(lrows));
4533a40ed3dSBarry Smith   PetscFunctionReturn(0);
4548965ea79SLois Curfman McInnes }
4558965ea79SLois Curfman McInnes 
456cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat,Vec,Vec);
457cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat,Vec,Vec,Vec);
458cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat,Vec,Vec);
459cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat,Vec,Vec,Vec);
460cc2e6a90SBarry Smith 
461dfbe8321SBarry Smith PetscErrorCode MatMult_MPIDense(Mat mat,Vec xx,Vec yy)
4628965ea79SLois Curfman McInnes {
46339ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
464637a0070SStefano Zampini   const PetscScalar *ax;
465637a0070SStefano Zampini   PetscScalar       *ay;
466d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
467c456f294SBarry Smith 
4683a40ed3dSBarry Smith   PetscFunctionBegin;
4696f08ad05SPierre Jolivet   if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
4709566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(xx,&ax,&axmtype));
4719566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype));
4729566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE));
4739566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE));
4749566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(mdn->lvec,&ay));
4759566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(xx,&ax));
4769566063dSJacob Faibussowitsch   PetscCall((*mdn->A->ops->mult)(mdn->A,mdn->lvec,yy));
4773a40ed3dSBarry Smith   PetscFunctionReturn(0);
4788965ea79SLois Curfman McInnes }
4798965ea79SLois Curfman McInnes 
480dfbe8321SBarry Smith PetscErrorCode MatMultAdd_MPIDense(Mat mat,Vec xx,Vec yy,Vec zz)
4818965ea79SLois Curfman McInnes {
48239ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
483637a0070SStefano Zampini   const PetscScalar *ax;
484637a0070SStefano Zampini   PetscScalar       *ay;
485d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
486c456f294SBarry Smith 
4873a40ed3dSBarry Smith   PetscFunctionBegin;
4886f08ad05SPierre Jolivet   if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
4899566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(xx,&ax,&axmtype));
4909566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype));
4919566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE));
4929566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE));
4939566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(mdn->lvec,&ay));
4949566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(xx,&ax));
4959566063dSJacob Faibussowitsch   PetscCall((*mdn->A->ops->multadd)(mdn->A,mdn->lvec,yy,zz));
4963a40ed3dSBarry Smith   PetscFunctionReturn(0);
4978965ea79SLois Curfman McInnes }
4988965ea79SLois Curfman McInnes 
499dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_MPIDense(Mat A,Vec xx,Vec yy)
500096963f5SLois Curfman McInnes {
501096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
502637a0070SStefano Zampini   const PetscScalar *ax;
503637a0070SStefano Zampini   PetscScalar       *ay;
504d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
505096963f5SLois Curfman McInnes 
5063a40ed3dSBarry Smith   PetscFunctionBegin;
5076f08ad05SPierre Jolivet   if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
5089566063dSJacob Faibussowitsch   PetscCall(VecSet(yy,0.0));
5099566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->multtranspose)(a->A,xx,a->lvec));
5109566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype));
5119566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(yy,&ay,&aymtype));
5129566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM));
5139566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM));
5149566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(a->lvec,&ax));
5159566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(yy,&ay));
5163a40ed3dSBarry Smith   PetscFunctionReturn(0);
517096963f5SLois Curfman McInnes }
518096963f5SLois Curfman McInnes 
519dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A,Vec xx,Vec yy,Vec zz)
520096963f5SLois Curfman McInnes {
521096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
522637a0070SStefano Zampini   const PetscScalar *ax;
523637a0070SStefano Zampini   PetscScalar       *ay;
524d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
525096963f5SLois Curfman McInnes 
5263a40ed3dSBarry Smith   PetscFunctionBegin;
5276f08ad05SPierre Jolivet   if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
5289566063dSJacob Faibussowitsch   PetscCall(VecCopy(yy,zz));
5299566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->multtranspose)(a->A,xx,a->lvec));
5309566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype));
5319566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(zz,&ay,&aymtype));
5329566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM));
5339566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM));
5349566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(a->lvec,&ax));
5359566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(zz,&ay));
5363a40ed3dSBarry Smith   PetscFunctionReturn(0);
537096963f5SLois Curfman McInnes }
538096963f5SLois Curfman McInnes 
539dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_MPIDense(Mat A,Vec v)
5408965ea79SLois Curfman McInnes {
54139ddd567SLois Curfman McInnes   Mat_MPIDense      *a    = (Mat_MPIDense*)A->data;
542637a0070SStefano Zampini   PetscInt          lda,len,i,n,m = A->rmap->n,radd;
54387828ca2SBarry Smith   PetscScalar       *x,zero = 0.0;
544637a0070SStefano Zampini   const PetscScalar *av;
545ed3cc1f0SBarry Smith 
5463a40ed3dSBarry Smith   PetscFunctionBegin;
5479566063dSJacob Faibussowitsch   PetscCall(VecSet(v,zero));
5489566063dSJacob Faibussowitsch   PetscCall(VecGetArray(v,&x));
5499566063dSJacob Faibussowitsch   PetscCall(VecGetSize(v,&n));
55008401ef6SPierre Jolivet   PetscCheck(n == A->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Nonconforming mat and vec");
551d0f46423SBarry Smith   len  = PetscMin(a->A->rmap->n,a->A->cmap->n);
552d0f46423SBarry Smith   radd = A->rmap->rstart*m;
5539566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&av));
5549566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
55544cd7ae7SLois Curfman McInnes   for (i=0; i<len; i++) {
556637a0070SStefano Zampini     x[i] = av[radd + i*lda + i];
557096963f5SLois Curfman McInnes   }
5589566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&av));
5599566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(v,&x));
5603a40ed3dSBarry Smith   PetscFunctionReturn(0);
5618965ea79SLois Curfman McInnes }
5628965ea79SLois Curfman McInnes 
563dfbe8321SBarry Smith PetscErrorCode MatDestroy_MPIDense(Mat mat)
5648965ea79SLois Curfman McInnes {
5653501a2bdSLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
566ed3cc1f0SBarry Smith 
5673a40ed3dSBarry Smith   PetscFunctionBegin;
568aa482453SBarry Smith #if defined(PETSC_USE_LOG)
569c0aa6a63SJacob Faibussowitsch   PetscLogObjectState((PetscObject)mat,"Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT,mat->rmap->N,mat->cmap->N);
5708965ea79SLois Curfman McInnes #endif
5719566063dSJacob Faibussowitsch   PetscCall(MatStashDestroy_Private(&mat->stash));
57228b400f6SJacob Faibussowitsch   PetscCheck(!mdn->vecinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
57328b400f6SJacob Faibussowitsch   PetscCheck(!mdn->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
5749566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&mdn->A));
5759566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&mdn->lvec));
5769566063dSJacob Faibussowitsch   PetscCall(PetscSFDestroy(&mdn->Mvctx));
5779566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&mdn->cvec));
5789566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&mdn->cmat));
57901b82886SBarry Smith 
5809566063dSJacob Faibussowitsch   PetscCall(PetscFree(mat->data));
5819566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)mat,NULL));
5828baccfbdSHong Zhang 
5839566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",NULL));
5849566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",NULL));
5859566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",NULL));
5869566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",NULL));
5879566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",NULL));
5889566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",NULL));
5899566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",NULL));
5909566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",NULL));
5919566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",NULL));
5929566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",NULL));
5939566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",NULL));
5949566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpiaij_mpidense_C",NULL));
5959566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpiaij_C",NULL));
5968baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
5979566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",NULL));
5988baccfbdSHong Zhang #endif
599d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
6009566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",NULL));
601d24d4204SJose E. Roman #endif
6029566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",NULL));
6039566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",NULL));
6049566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",NULL));
6056718818eSStefano Zampini #if defined (PETSC_HAVE_CUDA)
6069566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",NULL));
6079566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",NULL));
6086718818eSStefano Zampini #endif
6099566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",NULL));
6109566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",NULL));
6119566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",NULL));
6129566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",NULL));
6139566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",NULL));
6149566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",NULL));
6159566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",NULL));
6169566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",NULL));
6179566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",NULL));
6189566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",NULL));
6193a40ed3dSBarry Smith   PetscFunctionReturn(0);
6208965ea79SLois Curfman McInnes }
62139ddd567SLois Curfman McInnes 
62252c5f739Sprj- PETSC_INTERN PetscErrorCode MatView_SeqDense(Mat,PetscViewer);
62352c5f739Sprj- 
6249804daf3SBarry Smith #include <petscdraw.h>
6256849ba73SBarry Smith static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
6268965ea79SLois Curfman McInnes {
62739ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
628616b8fbbSStefano Zampini   PetscMPIInt       rank;
62919fd82e9SBarry Smith   PetscViewerType   vtype;
630ace3abfcSBarry Smith   PetscBool         iascii,isdraw;
631b0a32e0cSBarry Smith   PetscViewer       sviewer;
632f3ef73ceSBarry Smith   PetscViewerFormat format;
6338965ea79SLois Curfman McInnes 
6343a40ed3dSBarry Smith   PetscFunctionBegin;
6359566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat),&rank));
6369566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii));
6379566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw));
63832077d6dSBarry Smith   if (iascii) {
6399566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetType(viewer,&vtype));
6409566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetFormat(viewer,&format));
641456192e2SBarry Smith     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
6424e220ebcSLois Curfman McInnes       MatInfo info;
6439566063dSJacob Faibussowitsch       PetscCall(MatGetInfo(mat,MAT_LOCAL,&info));
6449566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPushSynchronized(viewer));
6459566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIISynchronizedPrintf(viewer,"  [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n",rank,mat->rmap->n,(PetscInt)info.nz_used,(PetscInt)info.nz_allocated,(PetscInt)info.memory));
6469566063dSJacob Faibussowitsch       PetscCall(PetscViewerFlush(viewer));
6479566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPopSynchronized(viewer));
6486f08ad05SPierre Jolivet       if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx,viewer));
6493a40ed3dSBarry Smith       PetscFunctionReturn(0);
650fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
6513a40ed3dSBarry Smith       PetscFunctionReturn(0);
6528965ea79SLois Curfman McInnes     }
653f1af5d2fSBarry Smith   } else if (isdraw) {
654b0a32e0cSBarry Smith     PetscDraw draw;
655ace3abfcSBarry Smith     PetscBool isnull;
656f1af5d2fSBarry Smith 
6579566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawGetDraw(viewer,0,&draw));
6589566063dSJacob Faibussowitsch     PetscCall(PetscDrawIsNull(draw,&isnull));
659f1af5d2fSBarry Smith     if (isnull) PetscFunctionReturn(0);
660f1af5d2fSBarry Smith   }
66177ed5343SBarry Smith 
6627da1fb6eSBarry Smith   {
6638965ea79SLois Curfman McInnes     /* assemble the entire matrix onto first processor. */
6648965ea79SLois Curfman McInnes     Mat         A;
665d0f46423SBarry Smith     PetscInt    M = mat->rmap->N,N = mat->cmap->N,m,row,i,nz;
666ba8c8a56SBarry Smith     PetscInt    *cols;
667ba8c8a56SBarry Smith     PetscScalar *vals;
6688965ea79SLois Curfman McInnes 
6699566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)mat),&A));
670dd400576SPatrick Sanan     if (rank == 0) {
6719566063dSJacob Faibussowitsch       PetscCall(MatSetSizes(A,M,N,M,N));
6723a40ed3dSBarry Smith     } else {
6739566063dSJacob Faibussowitsch       PetscCall(MatSetSizes(A,0,0,M,N));
6748965ea79SLois Curfman McInnes     }
6757adad957SLisandro Dalcin     /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */
6769566063dSJacob Faibussowitsch     PetscCall(MatSetType(A,MATMPIDENSE));
6779566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(A,NULL));
6789566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)mat,(PetscObject)A));
6798965ea79SLois Curfman McInnes 
68039ddd567SLois Curfman McInnes     /* Copy the matrix ... This isn't the most efficient means,
68139ddd567SLois Curfman McInnes        but it's quick for now */
68251022da4SBarry Smith     A->insertmode = INSERT_VALUES;
6832205254eSKarl Rupp 
6842205254eSKarl Rupp     row = mat->rmap->rstart;
6852205254eSKarl Rupp     m   = mdn->A->rmap->n;
6868965ea79SLois Curfman McInnes     for (i=0; i<m; i++) {
6879566063dSJacob Faibussowitsch       PetscCall(MatGetRow_MPIDense(mat,row,&nz,&cols,&vals));
6889566063dSJacob Faibussowitsch       PetscCall(MatSetValues_MPIDense(A,1,&row,nz,cols,vals,INSERT_VALUES));
6899566063dSJacob Faibussowitsch       PetscCall(MatRestoreRow_MPIDense(mat,row,&nz,&cols,&vals));
69039ddd567SLois Curfman McInnes       row++;
6918965ea79SLois Curfman McInnes     }
6928965ea79SLois Curfman McInnes 
6939566063dSJacob Faibussowitsch     PetscCall(MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY));
6949566063dSJacob Faibussowitsch     PetscCall(MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY));
6959566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetSubViewer(viewer,PETSC_COMM_SELF,&sviewer));
696dd400576SPatrick Sanan     if (rank == 0) {
6979566063dSJacob Faibussowitsch       PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense*)(A->data))->A,((PetscObject)mat)->name));
6989566063dSJacob Faibussowitsch       PetscCall(MatView_SeqDense(((Mat_MPIDense*)(A->data))->A,sviewer));
6998965ea79SLois Curfman McInnes     }
7009566063dSJacob Faibussowitsch     PetscCall(PetscViewerRestoreSubViewer(viewer,PETSC_COMM_SELF,&sviewer));
7019566063dSJacob Faibussowitsch     PetscCall(PetscViewerFlush(viewer));
7029566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&A));
7038965ea79SLois Curfman McInnes   }
7043a40ed3dSBarry Smith   PetscFunctionReturn(0);
7058965ea79SLois Curfman McInnes }
7068965ea79SLois Curfman McInnes 
707dfbe8321SBarry Smith PetscErrorCode MatView_MPIDense(Mat mat,PetscViewer viewer)
7088965ea79SLois Curfman McInnes {
709ace3abfcSBarry Smith   PetscBool      iascii,isbinary,isdraw,issocket;
7108965ea79SLois Curfman McInnes 
711433994e6SBarry Smith   PetscFunctionBegin;
7129566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii));
7139566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary));
7149566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERSOCKET,&issocket));
7159566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw));
7160f5bd95cSBarry Smith 
71732077d6dSBarry Smith   if (iascii || issocket || isdraw) {
7189566063dSJacob Faibussowitsch     PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat,viewer));
7190f5bd95cSBarry Smith   } else if (isbinary) {
7209566063dSJacob Faibussowitsch     PetscCall(MatView_Dense_Binary(mat,viewer));
72111aeaf0aSBarry Smith   }
7223a40ed3dSBarry Smith   PetscFunctionReturn(0);
7238965ea79SLois Curfman McInnes }
7248965ea79SLois Curfman McInnes 
725dfbe8321SBarry Smith PetscErrorCode MatGetInfo_MPIDense(Mat A,MatInfoType flag,MatInfo *info)
7268965ea79SLois Curfman McInnes {
7273501a2bdSLois Curfman McInnes   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
7283501a2bdSLois Curfman McInnes   Mat            mdn  = mat->A;
7293966268fSBarry Smith   PetscLogDouble isend[5],irecv[5];
7308965ea79SLois Curfman McInnes 
7313a40ed3dSBarry Smith   PetscFunctionBegin;
7324e220ebcSLois Curfman McInnes   info->block_size = 1.0;
7332205254eSKarl Rupp 
7349566063dSJacob Faibussowitsch   PetscCall(MatGetInfo(mdn,MAT_LOCAL,info));
7352205254eSKarl Rupp 
7364e220ebcSLois Curfman McInnes   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
7374e220ebcSLois Curfman McInnes   isend[3] = info->memory;  isend[4] = info->mallocs;
7388965ea79SLois Curfman McInnes   if (flag == MAT_LOCAL) {
7394e220ebcSLois Curfman McInnes     info->nz_used      = isend[0];
7404e220ebcSLois Curfman McInnes     info->nz_allocated = isend[1];
7414e220ebcSLois Curfman McInnes     info->nz_unneeded  = isend[2];
7424e220ebcSLois Curfman McInnes     info->memory       = isend[3];
7434e220ebcSLois Curfman McInnes     info->mallocs      = isend[4];
7448965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_MAX) {
7451c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_MAX,PetscObjectComm((PetscObject)A)));
7462205254eSKarl Rupp 
7474e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7484e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7494e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7504e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7514e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7528965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_SUM) {
7531c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_SUM,PetscObjectComm((PetscObject)A)));
7542205254eSKarl Rupp 
7554e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7564e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7574e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7584e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7594e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7608965ea79SLois Curfman McInnes   }
7614e220ebcSLois Curfman McInnes   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
7624e220ebcSLois Curfman McInnes   info->fill_ratio_needed = 0;
7634e220ebcSLois Curfman McInnes   info->factor_mallocs    = 0;
7643a40ed3dSBarry Smith   PetscFunctionReturn(0);
7658965ea79SLois Curfman McInnes }
7668965ea79SLois Curfman McInnes 
767ace3abfcSBarry Smith PetscErrorCode MatSetOption_MPIDense(Mat A,MatOption op,PetscBool flg)
7688965ea79SLois Curfman McInnes {
76939ddd567SLois Curfman McInnes   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
7708965ea79SLois Curfman McInnes 
7713a40ed3dSBarry Smith   PetscFunctionBegin;
77212c028f9SKris Buschelman   switch (op) {
773512a5fc5SBarry Smith   case MAT_NEW_NONZERO_LOCATIONS:
77412c028f9SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
77512c028f9SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
77643674050SBarry Smith     MatCheckPreallocated(A,1);
7779566063dSJacob Faibussowitsch     PetscCall(MatSetOption(a->A,op,flg));
77812c028f9SKris Buschelman     break;
77912c028f9SKris Buschelman   case MAT_ROW_ORIENTED:
78043674050SBarry Smith     MatCheckPreallocated(A,1);
7814e0d8c25SBarry Smith     a->roworiented = flg;
7829566063dSJacob Faibussowitsch     PetscCall(MatSetOption(a->A,op,flg));
78312c028f9SKris Buschelman     break;
7848c78258cSHong Zhang   case MAT_FORCE_DIAGONAL_ENTRIES:
78513fa8e87SLisandro Dalcin   case MAT_KEEP_NONZERO_PATTERN:
78612c028f9SKris Buschelman   case MAT_USE_HASH_TABLE:
787071fcb05SBarry Smith   case MAT_SORTED_FULL:
7889566063dSJacob Faibussowitsch     PetscCall(PetscInfo(A,"Option %s ignored\n",MatOptions[op]));
78912c028f9SKris Buschelman     break;
79012c028f9SKris Buschelman   case MAT_IGNORE_OFF_PROC_ENTRIES:
7914e0d8c25SBarry Smith     a->donotstash = flg;
79212c028f9SKris Buschelman     break;
79377e54ba9SKris Buschelman   case MAT_SYMMETRIC:
79477e54ba9SKris Buschelman   case MAT_STRUCTURALLY_SYMMETRIC:
7959a4540c5SBarry Smith   case MAT_HERMITIAN:
7969a4540c5SBarry Smith   case MAT_SYMMETRY_ETERNAL:
797600fe468SBarry Smith   case MAT_IGNORE_LOWER_TRIANGULAR:
7985d7aebe8SStefano Zampini   case MAT_IGNORE_ZERO_ENTRIES:
7999566063dSJacob Faibussowitsch     PetscCall(PetscInfo(A,"Option %s ignored\n",MatOptions[op]));
80077e54ba9SKris Buschelman     break;
80112c028f9SKris Buschelman   default:
80298921bdaSJacob Faibussowitsch     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"unknown option %s",MatOptions[op]);
8033a40ed3dSBarry Smith   }
8043a40ed3dSBarry Smith   PetscFunctionReturn(0);
8058965ea79SLois Curfman McInnes }
8068965ea79SLois Curfman McInnes 
807dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_MPIDense(Mat A,Vec ll,Vec rr)
8085b2fa520SLois Curfman McInnes {
8095b2fa520SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
810637a0070SStefano Zampini   const PetscScalar *l;
811637a0070SStefano Zampini   PetscScalar       x,*v,*vv,*r;
812637a0070SStefano Zampini   PetscInt          i,j,s2a,s3a,s2,s3,m=mdn->A->rmap->n,n=mdn->A->cmap->n,lda;
8135b2fa520SLois Curfman McInnes 
8145b2fa520SLois Curfman McInnes   PetscFunctionBegin;
8159566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(mdn->A,&vv));
8169566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(mdn->A,&lda));
8179566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(A,&s2,&s3));
8185b2fa520SLois Curfman McInnes   if (ll) {
8199566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(ll,&s2a));
82008401ef6SPierre Jolivet     PetscCheck(s2a == s2,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2);
8219566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(ll,&l));
8225b2fa520SLois Curfman McInnes     for (i=0; i<m; i++) {
8235b2fa520SLois Curfman McInnes       x = l[i];
824637a0070SStefano Zampini       v = vv + i;
825637a0070SStefano Zampini       for (j=0; j<n; j++) { (*v) *= x; v+= lda;}
8265b2fa520SLois Curfman McInnes     }
8279566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(ll,&l));
8289566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(1.0*n*m));
8295b2fa520SLois Curfman McInnes   }
8305b2fa520SLois Curfman McInnes   if (rr) {
831637a0070SStefano Zampini     const PetscScalar *ar;
832637a0070SStefano Zampini 
8339566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(rr,&s3a));
83408401ef6SPierre Jolivet     PetscCheck(s3a == s3,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3);
8359566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(rr,&ar));
8366f08ad05SPierre Jolivet     if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
8379566063dSJacob Faibussowitsch     PetscCall(VecGetArray(mdn->lvec,&r));
8389566063dSJacob Faibussowitsch     PetscCall(PetscSFBcastBegin(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE));
8399566063dSJacob Faibussowitsch     PetscCall(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE));
8409566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(rr,&ar));
8415b2fa520SLois Curfman McInnes     for (i=0; i<n; i++) {
8425b2fa520SLois Curfman McInnes       x = r[i];
843637a0070SStefano Zampini       v = vv + i*lda;
8442205254eSKarl Rupp       for (j=0; j<m; j++) (*v++) *= x;
8455b2fa520SLois Curfman McInnes     }
8469566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(mdn->lvec,&r));
8479566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(1.0*n*m));
8485b2fa520SLois Curfman McInnes   }
8499566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(mdn->A,&vv));
8505b2fa520SLois Curfman McInnes   PetscFunctionReturn(0);
8515b2fa520SLois Curfman McInnes }
8525b2fa520SLois Curfman McInnes 
853dfbe8321SBarry Smith PetscErrorCode MatNorm_MPIDense(Mat A,NormType type,PetscReal *nrm)
854096963f5SLois Curfman McInnes {
8553501a2bdSLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
85613f74950SBarry Smith   PetscInt          i,j;
857616b8fbbSStefano Zampini   PetscMPIInt       size;
858329f5518SBarry Smith   PetscReal         sum = 0.0;
859637a0070SStefano Zampini   const PetscScalar *av,*v;
8603501a2bdSLois Curfman McInnes 
8613a40ed3dSBarry Smith   PetscFunctionBegin;
8629566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(mdn->A,&av));
863637a0070SStefano Zampini   v    = av;
8649566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A),&size));
865616b8fbbSStefano Zampini   if (size == 1) {
8669566063dSJacob Faibussowitsch     PetscCall(MatNorm(mdn->A,type,nrm));
8673501a2bdSLois Curfman McInnes   } else {
8683501a2bdSLois Curfman McInnes     if (type == NORM_FROBENIUS) {
869d0f46423SBarry Smith       for (i=0; i<mdn->A->cmap->n*mdn->A->rmap->n; i++) {
870329f5518SBarry Smith         sum += PetscRealPart(PetscConj(*v)*(*v)); v++;
8713501a2bdSLois Curfman McInnes       }
8721c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(&sum,nrm,1,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A)));
8738f1a2a5eSBarry Smith       *nrm = PetscSqrtReal(*nrm);
8749566063dSJacob Faibussowitsch       PetscCall(PetscLogFlops(2.0*mdn->A->cmap->n*mdn->A->rmap->n));
8753a40ed3dSBarry Smith     } else if (type == NORM_1) {
876329f5518SBarry Smith       PetscReal *tmp,*tmp2;
8779566063dSJacob Faibussowitsch       PetscCall(PetscCalloc2(A->cmap->N,&tmp,A->cmap->N,&tmp2));
878064f8208SBarry Smith       *nrm = 0.0;
879637a0070SStefano Zampini       v    = av;
880d0f46423SBarry Smith       for (j=0; j<mdn->A->cmap->n; j++) {
881d0f46423SBarry Smith         for (i=0; i<mdn->A->rmap->n; i++) {
88267e560aaSBarry Smith           tmp[j] += PetscAbsScalar(*v);  v++;
8833501a2bdSLois Curfman McInnes         }
8843501a2bdSLois Curfman McInnes       }
8851c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(tmp,tmp2,A->cmap->N,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A)));
886d0f46423SBarry Smith       for (j=0; j<A->cmap->N; j++) {
887064f8208SBarry Smith         if (tmp2[j] > *nrm) *nrm = tmp2[j];
8883501a2bdSLois Curfman McInnes       }
8899566063dSJacob Faibussowitsch       PetscCall(PetscFree2(tmp,tmp2));
8909566063dSJacob Faibussowitsch       PetscCall(PetscLogFlops(A->cmap->n*A->rmap->n));
8913a40ed3dSBarry Smith     } else if (type == NORM_INFINITY) { /* max row norm */
892329f5518SBarry Smith       PetscReal ntemp;
8939566063dSJacob Faibussowitsch       PetscCall(MatNorm(mdn->A,type,&ntemp));
8941c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(&ntemp,nrm,1,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)A)));
895ce94432eSBarry Smith     } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for two norm");
8963501a2bdSLois Curfman McInnes   }
8979566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(mdn->A,&av));
8983a40ed3dSBarry Smith   PetscFunctionReturn(0);
8993501a2bdSLois Curfman McInnes }
9003501a2bdSLois Curfman McInnes 
901fc4dec0aSBarry Smith PetscErrorCode MatTranspose_MPIDense(Mat A,MatReuse reuse,Mat *matout)
9023501a2bdSLois Curfman McInnes {
9033501a2bdSLois Curfman McInnes   Mat_MPIDense   *a    = (Mat_MPIDense*)A->data;
9043501a2bdSLois Curfman McInnes   Mat            B;
905d0f46423SBarry Smith   PetscInt       M = A->rmap->N,N = A->cmap->N,m,n,*rwork,rstart = A->rmap->rstart;
906637a0070SStefano Zampini   PetscInt       j,i,lda;
90787828ca2SBarry Smith   PetscScalar    *v;
9083501a2bdSLois Curfman McInnes 
9093a40ed3dSBarry Smith   PetscFunctionBegin;
910cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) {
9119566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&B));
9129566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B,A->cmap->n,A->rmap->n,N,M));
9139566063dSJacob Faibussowitsch     PetscCall(MatSetType(B,((PetscObject)A)->type_name));
9149566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(B,NULL));
915637a0070SStefano Zampini   } else B = *matout;
9163501a2bdSLois Curfman McInnes 
917637a0070SStefano Zampini   m    = a->A->rmap->n; n = a->A->cmap->n;
9189566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,(const PetscScalar**)&v));
9199566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
9209566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(m,&rwork));
9213501a2bdSLois Curfman McInnes   for (i=0; i<m; i++) rwork[i] = rstart + i;
9221acff37aSSatish Balay   for (j=0; j<n; j++) {
9239566063dSJacob Faibussowitsch     PetscCall(MatSetValues(B,1,&j,m,rwork,v,INSERT_VALUES));
924637a0070SStefano Zampini     v   += lda;
9253501a2bdSLois Curfman McInnes   }
9269566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,(const PetscScalar**)&v));
9279566063dSJacob Faibussowitsch   PetscCall(PetscFree(rwork));
9289566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY));
9299566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY));
930cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) {
9313501a2bdSLois Curfman McInnes     *matout = B;
9323501a2bdSLois Curfman McInnes   } else {
9339566063dSJacob Faibussowitsch     PetscCall(MatHeaderMerge(A,&B));
9343501a2bdSLois Curfman McInnes   }
9353a40ed3dSBarry Smith   PetscFunctionReturn(0);
936096963f5SLois Curfman McInnes }
937096963f5SLois Curfman McInnes 
9386849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat,MatDuplicateOption,Mat*);
93952c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat,PetscScalar);
9408965ea79SLois Curfman McInnes 
9414994cf47SJed Brown PetscErrorCode MatSetUp_MPIDense(Mat A)
942273d9f13SBarry Smith {
943273d9f13SBarry Smith   PetscFunctionBegin;
9449566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->rmap));
9459566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->cmap));
94618992e5dSStefano Zampini   if (!A->preallocated) {
9479566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(A,NULL));
94818992e5dSStefano Zampini   }
949273d9f13SBarry Smith   PetscFunctionReturn(0);
950273d9f13SBarry Smith }
951273d9f13SBarry Smith 
952488007eeSBarry Smith PetscErrorCode MatAXPY_MPIDense(Mat Y,PetscScalar alpha,Mat X,MatStructure str)
953488007eeSBarry Smith {
954488007eeSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)Y->data, *B = (Mat_MPIDense*)X->data;
955488007eeSBarry Smith 
956488007eeSBarry Smith   PetscFunctionBegin;
9579566063dSJacob Faibussowitsch   PetscCall(MatAXPY(A->A,alpha,B->A,str));
958488007eeSBarry Smith   PetscFunctionReturn(0);
959488007eeSBarry Smith }
960488007eeSBarry Smith 
9617087cfbeSBarry Smith PetscErrorCode MatConjugate_MPIDense(Mat mat)
962ba337c44SJed Brown {
963ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
964ba337c44SJed Brown 
965ba337c44SJed Brown   PetscFunctionBegin;
9669566063dSJacob Faibussowitsch   PetscCall(MatConjugate(a->A));
967ba337c44SJed Brown   PetscFunctionReturn(0);
968ba337c44SJed Brown }
969ba337c44SJed Brown 
970ba337c44SJed Brown PetscErrorCode MatRealPart_MPIDense(Mat A)
971ba337c44SJed Brown {
972ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
973ba337c44SJed Brown 
974ba337c44SJed Brown   PetscFunctionBegin;
9759566063dSJacob Faibussowitsch   PetscCall(MatRealPart(a->A));
976ba337c44SJed Brown   PetscFunctionReturn(0);
977ba337c44SJed Brown }
978ba337c44SJed Brown 
979ba337c44SJed Brown PetscErrorCode MatImaginaryPart_MPIDense(Mat A)
980ba337c44SJed Brown {
981ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
982ba337c44SJed Brown 
983ba337c44SJed Brown   PetscFunctionBegin;
9849566063dSJacob Faibussowitsch   PetscCall(MatImaginaryPart(a->A));
985ba337c44SJed Brown   PetscFunctionReturn(0);
986ba337c44SJed Brown }
987ba337c44SJed Brown 
98849a6ff4bSBarry Smith static PetscErrorCode MatGetColumnVector_MPIDense(Mat A,Vec v,PetscInt col)
98949a6ff4bSBarry Smith {
990637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
99149a6ff4bSBarry Smith 
99249a6ff4bSBarry Smith   PetscFunctionBegin;
99328b400f6SJacob Faibussowitsch   PetscCheck(a->A,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing local matrix");
99428b400f6SJacob Faibussowitsch   PetscCheck(a->A->ops->getcolumnvector,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing get column operation");
9959566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->getcolumnvector)(a->A,v,col));
99649a6ff4bSBarry Smith   PetscFunctionReturn(0);
99749a6ff4bSBarry Smith }
99849a6ff4bSBarry Smith 
999857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat,PetscInt,PetscReal*);
100052c5f739Sprj- 
1001857cbf51SRichard Tran Mills PetscErrorCode MatGetColumnReductions_MPIDense(Mat A,PetscInt type,PetscReal *reductions)
10020716a85fSBarry Smith {
1003a873a8cdSSam Reynolds   PetscInt       i,m,n;
10040716a85fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
10050716a85fSBarry Smith   PetscReal      *work;
10060716a85fSBarry Smith 
10070716a85fSBarry Smith   PetscFunctionBegin;
10089566063dSJacob Faibussowitsch   PetscCall(MatGetSize(A,&m,&n));
10099566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(n,&work));
1010857cbf51SRichard Tran Mills   if (type == REDUCTION_MEAN_REALPART) {
10119566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A,(PetscInt)REDUCTION_SUM_REALPART,work));
1012857cbf51SRichard Tran Mills   } else if (type == REDUCTION_MEAN_IMAGINARYPART) {
10139566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A,(PetscInt)REDUCTION_SUM_IMAGINARYPART,work));
1014a873a8cdSSam Reynolds   } else {
10159566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A,type,work));
1016a873a8cdSSam Reynolds   }
1017857cbf51SRichard Tran Mills   if (type == NORM_2) {
10180716a85fSBarry Smith     for (i=0; i<n; i++) work[i] *= work[i];
10190716a85fSBarry Smith   }
1020857cbf51SRichard Tran Mills   if (type == NORM_INFINITY) {
10211c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(work,reductions,n,MPIU_REAL,MPIU_MAX,A->hdr.comm));
10220716a85fSBarry Smith   } else {
10231c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(work,reductions,n,MPIU_REAL,MPIU_SUM,A->hdr.comm));
10240716a85fSBarry Smith   }
10259566063dSJacob Faibussowitsch   PetscCall(PetscFree(work));
1026857cbf51SRichard Tran Mills   if (type == NORM_2) {
1027a873a8cdSSam Reynolds     for (i=0; i<n; i++) reductions[i] = PetscSqrtReal(reductions[i]);
1028857cbf51SRichard Tran Mills   } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) {
1029a873a8cdSSam Reynolds     for (i=0; i<n; i++) reductions[i] /= m;
10300716a85fSBarry Smith   }
10310716a85fSBarry Smith   PetscFunctionReturn(0);
10320716a85fSBarry Smith }
10330716a85fSBarry Smith 
1034637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
10356947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10366947451fSStefano Zampini {
10376947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10386947451fSStefano Zampini   PetscInt       lda;
10396947451fSStefano Zampini 
10406947451fSStefano Zampini   PetscFunctionBegin;
104128b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
104228b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10436947451fSStefano Zampini   if (!a->cvec) {
10449566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
10459566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
10466947451fSStefano Zampini   }
10476947451fSStefano Zampini   a->vecinuse = col + 1;
10489566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
10499566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArray(a->A,(PetscScalar**)&a->ptrinuse));
10509566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
10516947451fSStefano Zampini   *v   = a->cvec;
10526947451fSStefano Zampini   PetscFunctionReturn(0);
10536947451fSStefano Zampini }
10546947451fSStefano Zampini 
10556947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10566947451fSStefano Zampini {
10576947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10586947451fSStefano Zampini 
10596947451fSStefano Zampini   PetscFunctionBegin;
106028b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
106128b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
10626947451fSStefano Zampini   a->vecinuse = 0;
10639566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArray(a->A,(PetscScalar**)&a->ptrinuse));
10649566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
10656947451fSStefano Zampini   *v   = NULL;
10666947451fSStefano Zampini   PetscFunctionReturn(0);
10676947451fSStefano Zampini }
10686947451fSStefano Zampini 
10696947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10706947451fSStefano Zampini {
10716947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10726947451fSStefano Zampini   PetscInt       lda;
10736947451fSStefano Zampini 
10746947451fSStefano Zampini   PetscFunctionBegin;
107528b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
107628b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10776947451fSStefano Zampini   if (!a->cvec) {
10789566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
10799566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
10806947451fSStefano Zampini   }
10816947451fSStefano Zampini   a->vecinuse = col + 1;
10829566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
10839566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayRead(a->A,&a->ptrinuse));
10849566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
10859566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(a->cvec));
10866947451fSStefano Zampini   *v   = a->cvec;
10876947451fSStefano Zampini   PetscFunctionReturn(0);
10886947451fSStefano Zampini }
10896947451fSStefano Zampini 
10906947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10916947451fSStefano Zampini {
10926947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10936947451fSStefano Zampini 
10946947451fSStefano Zampini   PetscFunctionBegin;
109528b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
109628b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
10976947451fSStefano Zampini   a->vecinuse = 0;
10989566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayRead(a->A,&a->ptrinuse));
10999566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(a->cvec));
11009566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
11016947451fSStefano Zampini   *v   = NULL;
11026947451fSStefano Zampini   PetscFunctionReturn(0);
11036947451fSStefano Zampini }
11046947451fSStefano Zampini 
11056947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11066947451fSStefano Zampini {
11076947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11086947451fSStefano Zampini   PetscInt       lda;
11096947451fSStefano Zampini 
11106947451fSStefano Zampini   PetscFunctionBegin;
111128b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
111228b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11136947451fSStefano Zampini   if (!a->cvec) {
11149566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
11159566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
11166947451fSStefano Zampini   }
11176947451fSStefano Zampini   a->vecinuse = col + 1;
11189566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
11199566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
11209566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
11216947451fSStefano Zampini   *v   = a->cvec;
11226947451fSStefano Zampini   PetscFunctionReturn(0);
11236947451fSStefano Zampini }
11246947451fSStefano Zampini 
11256947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11266947451fSStefano Zampini {
11276947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11286947451fSStefano Zampini 
11296947451fSStefano Zampini   PetscFunctionBegin;
113028b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
113128b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
11326947451fSStefano Zampini   a->vecinuse = 0;
11339566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
11349566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
11356947451fSStefano Zampini   *v   = NULL;
11366947451fSStefano Zampini   PetscFunctionReturn(0);
11376947451fSStefano Zampini }
11386947451fSStefano Zampini 
1139637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAPlaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1140637a0070SStefano Zampini {
1141637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1142637a0070SStefano Zampini 
1143637a0070SStefano Zampini   PetscFunctionBegin;
114428b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
114528b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11469566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAPlaceArray(l->A,a));
1147637a0070SStefano Zampini   PetscFunctionReturn(0);
1148637a0070SStefano Zampini }
1149637a0070SStefano Zampini 
1150637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAResetArray_MPIDenseCUDA(Mat A)
1151637a0070SStefano Zampini {
1152637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1153637a0070SStefano Zampini 
1154637a0070SStefano Zampini   PetscFunctionBegin;
115528b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
115628b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11579566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAResetArray(l->A));
1158637a0070SStefano Zampini   PetscFunctionReturn(0);
1159637a0070SStefano Zampini }
1160637a0070SStefano Zampini 
1161d5ea218eSStefano Zampini static PetscErrorCode MatDenseCUDAReplaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1162d5ea218eSStefano Zampini {
1163d5ea218eSStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1164d5ea218eSStefano Zampini 
1165d5ea218eSStefano Zampini   PetscFunctionBegin;
116628b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
116728b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11689566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAReplaceArray(l->A,a));
1169d5ea218eSStefano Zampini   PetscFunctionReturn(0);
1170d5ea218eSStefano Zampini }
1171d5ea218eSStefano Zampini 
1172637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1173637a0070SStefano Zampini {
1174637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1175637a0070SStefano Zampini 
1176637a0070SStefano Zampini   PetscFunctionBegin;
11779566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayWrite(l->A,a));
1178637a0070SStefano Zampini   PetscFunctionReturn(0);
1179637a0070SStefano Zampini }
1180637a0070SStefano Zampini 
1181637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1182637a0070SStefano Zampini {
1183637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1184637a0070SStefano Zampini 
1185637a0070SStefano Zampini   PetscFunctionBegin;
11869566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayWrite(l->A,a));
1187637a0070SStefano Zampini   PetscFunctionReturn(0);
1188637a0070SStefano Zampini }
1189637a0070SStefano Zampini 
1190637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1191637a0070SStefano Zampini {
1192637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1193637a0070SStefano Zampini 
1194637a0070SStefano Zampini   PetscFunctionBegin;
11959566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayRead(l->A,a));
1196637a0070SStefano Zampini   PetscFunctionReturn(0);
1197637a0070SStefano Zampini }
1198637a0070SStefano Zampini 
1199637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1200637a0070SStefano Zampini {
1201637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1202637a0070SStefano Zampini 
1203637a0070SStefano Zampini   PetscFunctionBegin;
12049566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayRead(l->A,a));
1205637a0070SStefano Zampini   PetscFunctionReturn(0);
1206637a0070SStefano Zampini }
1207637a0070SStefano Zampini 
1208637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1209637a0070SStefano Zampini {
1210637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1211637a0070SStefano Zampini 
1212637a0070SStefano Zampini   PetscFunctionBegin;
12139566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArray(l->A,a));
1214637a0070SStefano Zampini   PetscFunctionReturn(0);
1215637a0070SStefano Zampini }
1216637a0070SStefano Zampini 
1217637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1218637a0070SStefano Zampini {
1219637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1220637a0070SStefano Zampini 
1221637a0070SStefano Zampini   PetscFunctionBegin;
12229566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArray(l->A,a));
1223637a0070SStefano Zampini   PetscFunctionReturn(0);
1224637a0070SStefano Zampini }
1225637a0070SStefano Zampini 
12266947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12276947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12286947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat,PetscInt,Vec*);
12296947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12306947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12316947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat,PetscInt,Vec*);
12325ea7661aSPierre Jolivet static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat,Mat*);
12336947451fSStefano Zampini 
1234637a0070SStefano Zampini static PetscErrorCode MatBindToCPU_MPIDenseCUDA(Mat mat,PetscBool bind)
1235637a0070SStefano Zampini {
1236637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)mat->data;
1237637a0070SStefano Zampini 
1238637a0070SStefano Zampini   PetscFunctionBegin;
123928b400f6SJacob Faibussowitsch   PetscCheck(!d->vecinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
124028b400f6SJacob Faibussowitsch   PetscCheck(!d->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1241637a0070SStefano Zampini   if (d->A) {
12429566063dSJacob Faibussowitsch     PetscCall(MatBindToCPU(d->A,bind));
1243637a0070SStefano Zampini   }
1244637a0070SStefano Zampini   mat->boundtocpu = bind;
12456947451fSStefano Zampini   if (!bind) {
12466947451fSStefano Zampini     PetscBool iscuda;
12476947451fSStefano Zampini 
12489566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)d->cvec,VECMPICUDA,&iscuda));
12496947451fSStefano Zampini     if (!iscuda) {
12509566063dSJacob Faibussowitsch       PetscCall(VecDestroy(&d->cvec));
1251616b8fbbSStefano Zampini     }
12529566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)d->cmat,MATMPIDENSECUDA,&iscuda));
1253616b8fbbSStefano Zampini     if (!iscuda) {
12549566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&d->cmat));
12556947451fSStefano Zampini     }
12569566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDenseCUDA));
12579566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDenseCUDA));
12589566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDenseCUDA));
12599566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDenseCUDA));
12609566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDenseCUDA));
12619566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDenseCUDA));
12626947451fSStefano Zampini   } else {
12639566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense));
12649566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense));
12659566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense));
12669566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense));
12679566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense));
12689566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense));
1269616b8fbbSStefano Zampini   }
1270616b8fbbSStefano Zampini   if (d->cmat) {
12719566063dSJacob Faibussowitsch     PetscCall(MatBindToCPU(d->cmat,bind));
12726947451fSStefano Zampini   }
1273637a0070SStefano Zampini   PetscFunctionReturn(0);
1274637a0070SStefano Zampini }
1275637a0070SStefano Zampini 
1276637a0070SStefano Zampini PetscErrorCode MatMPIDenseCUDASetPreallocation(Mat A, PetscScalar *d_data)
1277637a0070SStefano Zampini {
1278637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)A->data;
1279637a0070SStefano Zampini   PetscBool      iscuda;
1280637a0070SStefano Zampini 
1281637a0070SStefano Zampini   PetscFunctionBegin;
1282d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
12839566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda));
1284637a0070SStefano Zampini   if (!iscuda) PetscFunctionReturn(0);
12859566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->rmap));
12869566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->cmap));
1287637a0070SStefano Zampini   if (!d->A) {
12889566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF,&d->A));
12899566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)d->A));
12909566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(d->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N));
1291637a0070SStefano Zampini   }
12929566063dSJacob Faibussowitsch   PetscCall(MatSetType(d->A,MATSEQDENSECUDA));
12939566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseCUDASetPreallocation(d->A,d_data));
1294637a0070SStefano Zampini   A->preallocated = PETSC_TRUE;
12956f08ad05SPierre Jolivet   A->assembled = PETSC_TRUE;
1296637a0070SStefano Zampini   PetscFunctionReturn(0);
1297637a0070SStefano Zampini }
1298637a0070SStefano Zampini #endif
1299637a0070SStefano Zampini 
130073a71a0fSBarry Smith static PetscErrorCode MatSetRandom_MPIDense(Mat x,PetscRandom rctx)
130173a71a0fSBarry Smith {
130273a71a0fSBarry Smith   Mat_MPIDense   *d = (Mat_MPIDense*)x->data;
130373a71a0fSBarry Smith 
130473a71a0fSBarry Smith   PetscFunctionBegin;
13059566063dSJacob Faibussowitsch   PetscCall(MatSetRandom(d->A,rctx));
130673a71a0fSBarry Smith   PetscFunctionReturn(0);
130773a71a0fSBarry Smith }
130873a71a0fSBarry Smith 
13093b49f96aSBarry Smith static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A,PetscBool  *missing,PetscInt *d)
13103b49f96aSBarry Smith {
13113b49f96aSBarry Smith   PetscFunctionBegin;
13123b49f96aSBarry Smith   *missing = PETSC_FALSE;
13133b49f96aSBarry Smith   PetscFunctionReturn(0);
13143b49f96aSBarry Smith }
13153b49f96aSBarry Smith 
13164222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1317cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13186718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1319a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13206718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat,Mat,PetscBool*);
13216718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat,PetscViewer);
1322cc48ffa7SToby Isaac 
13238965ea79SLois Curfman McInnes /* -------------------------------------------------------------------*/
132409dc0095SBarry Smith static struct _MatOps MatOps_Values = { MatSetValues_MPIDense,
132509dc0095SBarry Smith                                         MatGetRow_MPIDense,
132609dc0095SBarry Smith                                         MatRestoreRow_MPIDense,
132709dc0095SBarry Smith                                         MatMult_MPIDense,
132897304618SKris Buschelman                                 /*  4*/ MatMultAdd_MPIDense,
13297c922b88SBarry Smith                                         MatMultTranspose_MPIDense,
13307c922b88SBarry Smith                                         MatMultTransposeAdd_MPIDense,
1331f4259b30SLisandro Dalcin                                         NULL,
1332f4259b30SLisandro Dalcin                                         NULL,
1333f4259b30SLisandro Dalcin                                         NULL,
1334f4259b30SLisandro Dalcin                                 /* 10*/ NULL,
1335f4259b30SLisandro Dalcin                                         NULL,
1336f4259b30SLisandro Dalcin                                         NULL,
1337f4259b30SLisandro Dalcin                                         NULL,
133809dc0095SBarry Smith                                         MatTranspose_MPIDense,
133997304618SKris Buschelman                                 /* 15*/ MatGetInfo_MPIDense,
13406e4ee0c6SHong Zhang                                         MatEqual_MPIDense,
134109dc0095SBarry Smith                                         MatGetDiagonal_MPIDense,
13425b2fa520SLois Curfman McInnes                                         MatDiagonalScale_MPIDense,
134309dc0095SBarry Smith                                         MatNorm_MPIDense,
134497304618SKris Buschelman                                 /* 20*/ MatAssemblyBegin_MPIDense,
134509dc0095SBarry Smith                                         MatAssemblyEnd_MPIDense,
134609dc0095SBarry Smith                                         MatSetOption_MPIDense,
134709dc0095SBarry Smith                                         MatZeroEntries_MPIDense,
1348d519adbfSMatthew Knepley                                 /* 24*/ MatZeroRows_MPIDense,
1349f4259b30SLisandro Dalcin                                         NULL,
1350f4259b30SLisandro Dalcin                                         NULL,
1351f4259b30SLisandro Dalcin                                         NULL,
1352f4259b30SLisandro Dalcin                                         NULL,
13534994cf47SJed Brown                                 /* 29*/ MatSetUp_MPIDense,
1354f4259b30SLisandro Dalcin                                         NULL,
1355f4259b30SLisandro Dalcin                                         NULL,
1356c56a70eeSBarry Smith                                         MatGetDiagonalBlock_MPIDense,
1357f4259b30SLisandro Dalcin                                         NULL,
1358d519adbfSMatthew Knepley                                 /* 34*/ MatDuplicate_MPIDense,
1359f4259b30SLisandro Dalcin                                         NULL,
1360f4259b30SLisandro Dalcin                                         NULL,
1361f4259b30SLisandro Dalcin                                         NULL,
1362f4259b30SLisandro Dalcin                                         NULL,
1363d519adbfSMatthew Knepley                                 /* 39*/ MatAXPY_MPIDense,
13647dae84e0SHong Zhang                                         MatCreateSubMatrices_MPIDense,
1365f4259b30SLisandro Dalcin                                         NULL,
136609dc0095SBarry Smith                                         MatGetValues_MPIDense,
1367a76f77c3SStefano Zampini                                         MatCopy_MPIDense,
1368f4259b30SLisandro Dalcin                                 /* 44*/ NULL,
136909dc0095SBarry Smith                                         MatScale_MPIDense,
1370*2f605a99SJose E. Roman                                         MatShift_MPIDense,
1371f4259b30SLisandro Dalcin                                         NULL,
1372f4259b30SLisandro Dalcin                                         NULL,
137373a71a0fSBarry Smith                                 /* 49*/ MatSetRandom_MPIDense,
1374f4259b30SLisandro Dalcin                                         NULL,
1375f4259b30SLisandro Dalcin                                         NULL,
1376f4259b30SLisandro Dalcin                                         NULL,
1377f4259b30SLisandro Dalcin                                         NULL,
1378f4259b30SLisandro Dalcin                                 /* 54*/ NULL,
1379f4259b30SLisandro Dalcin                                         NULL,
1380f4259b30SLisandro Dalcin                                         NULL,
1381f4259b30SLisandro Dalcin                                         NULL,
1382f4259b30SLisandro Dalcin                                         NULL,
13837dae84e0SHong Zhang                                 /* 59*/ MatCreateSubMatrix_MPIDense,
1384b9b97703SBarry Smith                                         MatDestroy_MPIDense,
1385b9b97703SBarry Smith                                         MatView_MPIDense,
1386f4259b30SLisandro Dalcin                                         NULL,
1387f4259b30SLisandro Dalcin                                         NULL,
1388f4259b30SLisandro Dalcin                                 /* 64*/ NULL,
1389f4259b30SLisandro Dalcin                                         NULL,
1390f4259b30SLisandro Dalcin                                         NULL,
1391f4259b30SLisandro Dalcin                                         NULL,
1392f4259b30SLisandro Dalcin                                         NULL,
1393f4259b30SLisandro Dalcin                                 /* 69*/ NULL,
1394f4259b30SLisandro Dalcin                                         NULL,
1395f4259b30SLisandro Dalcin                                         NULL,
1396f4259b30SLisandro Dalcin                                         NULL,
1397f4259b30SLisandro Dalcin                                         NULL,
1398f4259b30SLisandro Dalcin                                 /* 74*/ NULL,
1399f4259b30SLisandro Dalcin                                         NULL,
1400f4259b30SLisandro Dalcin                                         NULL,
1401f4259b30SLisandro Dalcin                                         NULL,
1402f4259b30SLisandro Dalcin                                         NULL,
1403f4259b30SLisandro Dalcin                                 /* 79*/ NULL,
1404f4259b30SLisandro Dalcin                                         NULL,
1405f4259b30SLisandro Dalcin                                         NULL,
1406f4259b30SLisandro Dalcin                                         NULL,
14075bba2384SShri Abhyankar                                 /* 83*/ MatLoad_MPIDense,
1408f4259b30SLisandro Dalcin                                         NULL,
1409f4259b30SLisandro Dalcin                                         NULL,
1410f4259b30SLisandro Dalcin                                         NULL,
1411f4259b30SLisandro Dalcin                                         NULL,
1412f4259b30SLisandro Dalcin                                         NULL,
1413f4259b30SLisandro Dalcin                                 /* 89*/ NULL,
1414f4259b30SLisandro Dalcin                                         NULL,
1415f4259b30SLisandro Dalcin                                         NULL,
1416f4259b30SLisandro Dalcin                                         NULL,
1417f4259b30SLisandro Dalcin                                         NULL,
1418f4259b30SLisandro Dalcin                                 /* 94*/ NULL,
1419f4259b30SLisandro Dalcin                                         NULL,
14206718818eSStefano Zampini                                         MatMatTransposeMultSymbolic_MPIDense_MPIDense,
1421cc48ffa7SToby Isaac                                         MatMatTransposeMultNumeric_MPIDense_MPIDense,
1422f4259b30SLisandro Dalcin                                         NULL,
14234222ddf1SHong Zhang                                 /* 99*/ MatProductSetFromOptions_MPIDense,
1424f4259b30SLisandro Dalcin                                         NULL,
1425f4259b30SLisandro Dalcin                                         NULL,
1426ba337c44SJed Brown                                         MatConjugate_MPIDense,
1427f4259b30SLisandro Dalcin                                         NULL,
1428f4259b30SLisandro Dalcin                                 /*104*/ NULL,
1429ba337c44SJed Brown                                         MatRealPart_MPIDense,
1430ba337c44SJed Brown                                         MatImaginaryPart_MPIDense,
1431f4259b30SLisandro Dalcin                                         NULL,
1432f4259b30SLisandro Dalcin                                         NULL,
1433f4259b30SLisandro Dalcin                                 /*109*/ NULL,
1434f4259b30SLisandro Dalcin                                         NULL,
1435f4259b30SLisandro Dalcin                                         NULL,
143649a6ff4bSBarry Smith                                         MatGetColumnVector_MPIDense,
14373b49f96aSBarry Smith                                         MatMissingDiagonal_MPIDense,
1438f4259b30SLisandro Dalcin                                 /*114*/ NULL,
1439f4259b30SLisandro Dalcin                                         NULL,
1440f4259b30SLisandro Dalcin                                         NULL,
1441f4259b30SLisandro Dalcin                                         NULL,
1442f4259b30SLisandro Dalcin                                         NULL,
1443f4259b30SLisandro Dalcin                                 /*119*/ NULL,
1444f4259b30SLisandro Dalcin                                         NULL,
1445f4259b30SLisandro Dalcin                                         NULL,
1446f4259b30SLisandro Dalcin                                         NULL,
1447f4259b30SLisandro Dalcin                                         NULL,
1448f4259b30SLisandro Dalcin                                 /*124*/ NULL,
1449a873a8cdSSam Reynolds                                         MatGetColumnReductions_MPIDense,
1450f4259b30SLisandro Dalcin                                         NULL,
1451f4259b30SLisandro Dalcin                                         NULL,
1452f4259b30SLisandro Dalcin                                         NULL,
1453f4259b30SLisandro Dalcin                                 /*129*/ NULL,
1454f4259b30SLisandro Dalcin                                         NULL,
14556718818eSStefano Zampini                                         MatTransposeMatMultSymbolic_MPIDense_MPIDense,
1456cb20be35SHong Zhang                                         MatTransposeMatMultNumeric_MPIDense_MPIDense,
1457f4259b30SLisandro Dalcin                                         NULL,
1458f4259b30SLisandro Dalcin                                 /*134*/ NULL,
1459f4259b30SLisandro Dalcin                                         NULL,
1460f4259b30SLisandro Dalcin                                         NULL,
1461f4259b30SLisandro Dalcin                                         NULL,
1462f4259b30SLisandro Dalcin                                         NULL,
1463f4259b30SLisandro Dalcin                                 /*139*/ NULL,
1464f4259b30SLisandro Dalcin                                         NULL,
1465f4259b30SLisandro Dalcin                                         NULL,
1466f4259b30SLisandro Dalcin                                         NULL,
1467f4259b30SLisandro Dalcin                                         NULL,
14684222ddf1SHong Zhang                                         MatCreateMPIMatConcatenateSeqMat_MPIDense,
1469f4259b30SLisandro Dalcin                                 /*145*/ NULL,
1470f4259b30SLisandro Dalcin                                         NULL,
1471f4259b30SLisandro Dalcin                                         NULL
1472ba337c44SJed Brown };
14738965ea79SLois Curfman McInnes 
14747087cfbeSBarry Smith PetscErrorCode  MatMPIDenseSetPreallocation_MPIDense(Mat mat,PetscScalar *data)
1475a23d5eceSKris Buschelman {
1476637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
1477637a0070SStefano Zampini   PetscBool      iscuda;
1478a23d5eceSKris Buschelman 
1479a23d5eceSKris Buschelman   PetscFunctionBegin;
148028b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
14819566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(mat->rmap));
14829566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(mat->cmap));
1483637a0070SStefano Zampini   if (!a->A) {
14849566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF,&a->A));
14859566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A));
14869566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(a->A,mat->rmap->n,mat->cmap->N,mat->rmap->n,mat->cmap->N));
1487637a0070SStefano Zampini   }
14889566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)mat,MATMPIDENSECUDA,&iscuda));
14899566063dSJacob Faibussowitsch   PetscCall(MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE));
14909566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseSetPreallocation(a->A,data));
1491637a0070SStefano Zampini   mat->preallocated = PETSC_TRUE;
14926f08ad05SPierre Jolivet   mat->assembled = PETSC_TRUE;
1493a23d5eceSKris Buschelman   PetscFunctionReturn(0);
1494a23d5eceSKris Buschelman }
1495a23d5eceSKris Buschelman 
14964e29119aSPierre Jolivet PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
14974e29119aSPierre Jolivet {
14984e29119aSPierre Jolivet   Mat            B,C;
14994e29119aSPierre Jolivet 
15004e29119aSPierre Jolivet   PetscFunctionBegin;
15019566063dSJacob Faibussowitsch   PetscCall(MatMPIAIJGetLocalMat(A,MAT_INITIAL_MATRIX,&C));
15029566063dSJacob Faibussowitsch   PetscCall(MatConvert_SeqAIJ_SeqDense(C,MATSEQDENSE,MAT_INITIAL_MATRIX,&B));
15039566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&C));
15044e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
15054e29119aSPierre Jolivet     C = *newmat;
15064e29119aSPierre Jolivet   } else C = NULL;
15079566063dSJacob Faibussowitsch   PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A),B,A->cmap->n,!C?MAT_INITIAL_MATRIX:MAT_REUSE_MATRIX,&C));
15089566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&B));
15094e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
15109566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A,&C));
15114e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
15124e29119aSPierre Jolivet   PetscFunctionReturn(0);
15134e29119aSPierre Jolivet }
15144e29119aSPierre Jolivet 
15154e29119aSPierre Jolivet PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15164e29119aSPierre Jolivet {
15174e29119aSPierre Jolivet   Mat            B,C;
15184e29119aSPierre Jolivet 
15194e29119aSPierre Jolivet   PetscFunctionBegin;
15209566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLocalMatrix(A,&C));
15219566063dSJacob Faibussowitsch   PetscCall(MatConvert_SeqDense_SeqAIJ(C,MATSEQAIJ,MAT_INITIAL_MATRIX,&B));
15224e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
15234e29119aSPierre Jolivet     C = *newmat;
15244e29119aSPierre Jolivet   } else C = NULL;
15259566063dSJacob Faibussowitsch   PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A),B,A->cmap->n,!C?MAT_INITIAL_MATRIX:MAT_REUSE_MATRIX,&C));
15269566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&B));
15274e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
15289566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A,&C));
15294e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
15304e29119aSPierre Jolivet   PetscFunctionReturn(0);
15314e29119aSPierre Jolivet }
15324e29119aSPierre Jolivet 
153365b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
1534cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15358baccfbdSHong Zhang {
15368ea901baSHong Zhang   Mat            mat_elemental;
153732d7a744SHong Zhang   PetscScalar    *v;
153832d7a744SHong Zhang   PetscInt       m=A->rmap->n,N=A->cmap->N,rstart=A->rmap->rstart,i,*rows,*cols;
15398ea901baSHong Zhang 
15408baccfbdSHong Zhang   PetscFunctionBegin;
1541378336b6SHong Zhang   if (reuse == MAT_REUSE_MATRIX) {
1542378336b6SHong Zhang     mat_elemental = *newmat;
15439566063dSJacob Faibussowitsch     PetscCall(MatZeroEntries(*newmat));
1544378336b6SHong Zhang   } else {
15459566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental));
15469566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(mat_elemental,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N));
15479566063dSJacob Faibussowitsch     PetscCall(MatSetType(mat_elemental,MATELEMENTAL));
15489566063dSJacob Faibussowitsch     PetscCall(MatSetUp(mat_elemental));
15499566063dSJacob Faibussowitsch     PetscCall(MatSetOption(mat_elemental,MAT_ROW_ORIENTED,PETSC_FALSE));
1550378336b6SHong Zhang   }
1551378336b6SHong Zhang 
15529566063dSJacob Faibussowitsch   PetscCall(PetscMalloc2(m,&rows,N,&cols));
155332d7a744SHong Zhang   for (i=0; i<N; i++) cols[i] = i;
155432d7a744SHong Zhang   for (i=0; i<m; i++) rows[i] = rstart + i;
15558ea901baSHong Zhang 
1556637a0070SStefano Zampini   /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */
15579566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(A,&v));
15589566063dSJacob Faibussowitsch   PetscCall(MatSetValues(mat_elemental,m,rows,N,cols,v,ADD_VALUES));
15599566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY));
15609566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY));
15619566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(A,&v));
15629566063dSJacob Faibussowitsch   PetscCall(PetscFree2(rows,cols));
15638ea901baSHong Zhang 
1564511c6705SHong Zhang   if (reuse == MAT_INPLACE_MATRIX) {
15659566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A,&mat_elemental));
15668ea901baSHong Zhang   } else {
15678ea901baSHong Zhang     *newmat = mat_elemental;
15688ea901baSHong Zhang   }
15698baccfbdSHong Zhang   PetscFunctionReturn(0);
15708baccfbdSHong Zhang }
157165b80a83SHong Zhang #endif
15728baccfbdSHong Zhang 
1573af53bab2SHong Zhang static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A,PetscInt col,PetscScalar **vals)
157486aefd0dSHong Zhang {
157586aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
157686aefd0dSHong Zhang 
157786aefd0dSHong Zhang   PetscFunctionBegin;
15789566063dSJacob Faibussowitsch   PetscCall(MatDenseGetColumn(mat->A,col,vals));
157986aefd0dSHong Zhang   PetscFunctionReturn(0);
158086aefd0dSHong Zhang }
158186aefd0dSHong Zhang 
1582af53bab2SHong Zhang static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A,PetscScalar **vals)
158386aefd0dSHong Zhang {
158486aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
158586aefd0dSHong Zhang 
158686aefd0dSHong Zhang   PetscFunctionBegin;
15879566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreColumn(mat->A,vals));
158886aefd0dSHong Zhang   PetscFunctionReturn(0);
158986aefd0dSHong Zhang }
159086aefd0dSHong Zhang 
159194e2cb23SJakub Kruzik PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm,Mat inmat,PetscInt n,MatReuse scall,Mat *outmat)
159294e2cb23SJakub Kruzik {
159394e2cb23SJakub Kruzik   Mat_MPIDense   *mat;
159494e2cb23SJakub Kruzik   PetscInt       m,nloc,N;
159594e2cb23SJakub Kruzik 
159694e2cb23SJakub Kruzik   PetscFunctionBegin;
15979566063dSJacob Faibussowitsch   PetscCall(MatGetSize(inmat,&m,&N));
15989566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(inmat,NULL,&nloc));
159994e2cb23SJakub Kruzik   if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */
160094e2cb23SJakub Kruzik     PetscInt sum;
160194e2cb23SJakub Kruzik 
160294e2cb23SJakub Kruzik     if (n == PETSC_DECIDE) {
16039566063dSJacob Faibussowitsch       PetscCall(PetscSplitOwnership(comm,&n,&N));
160494e2cb23SJakub Kruzik     }
160594e2cb23SJakub Kruzik     /* Check sum(n) = N */
16061c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(&n,&sum,1,MPIU_INT,MPI_SUM,comm));
160708401ef6SPierre Jolivet     PetscCheck(sum == N,PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT,sum,N);
160894e2cb23SJakub Kruzik 
16099566063dSJacob Faibussowitsch     PetscCall(MatCreateDense(comm,m,n,PETSC_DETERMINE,N,NULL,outmat));
16109566063dSJacob Faibussowitsch     PetscCall(MatSetOption(*outmat,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE));
161194e2cb23SJakub Kruzik   }
161294e2cb23SJakub Kruzik 
161394e2cb23SJakub Kruzik   /* numeric phase */
161494e2cb23SJakub Kruzik   mat = (Mat_MPIDense*)(*outmat)->data;
16159566063dSJacob Faibussowitsch   PetscCall(MatCopy(inmat,mat->A,SAME_NONZERO_PATTERN));
161694e2cb23SJakub Kruzik   PetscFunctionReturn(0);
161794e2cb23SJakub Kruzik }
161894e2cb23SJakub Kruzik 
1619637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1620637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDenseCUDA_MPIDense(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1621637a0070SStefano Zampini {
1622637a0070SStefano Zampini   Mat            B;
1623637a0070SStefano Zampini   Mat_MPIDense   *m;
1624637a0070SStefano Zampini 
1625637a0070SStefano Zampini   PetscFunctionBegin;
1626637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
16279566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(M,MAT_COPY_VALUES,newmat));
1628637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
16299566063dSJacob Faibussowitsch     PetscCall(MatCopy(M,*newmat,SAME_NONZERO_PATTERN));
1630637a0070SStefano Zampini   }
1631637a0070SStefano Zampini 
1632637a0070SStefano Zampini   B    = *newmat;
16339566063dSJacob Faibussowitsch   PetscCall(MatBindToCPU_MPIDenseCUDA(B,PETSC_TRUE));
16349566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->defaultvectype));
16359566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(VECSTANDARD,&B->defaultvectype));
16369566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSE));
16379566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",NULL));
16389566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",NULL));
16399566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",NULL));
16409566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",NULL));
16419566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",NULL));
16429566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",NULL));
16439566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",NULL));
16449566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",NULL));
16459566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",NULL));
16469566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",NULL));
16479566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",NULL));
16489566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",NULL));
16499566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",NULL));
16509566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",NULL));
1651637a0070SStefano Zampini   m    = (Mat_MPIDense*)(B)->data;
1652637a0070SStefano Zampini   if (m->A) {
16539566063dSJacob Faibussowitsch     PetscCall(MatConvert(m->A,MATSEQDENSE,MAT_INPLACE_MATRIX,&m->A));
1654637a0070SStefano Zampini   }
1655637a0070SStefano Zampini   B->ops->bindtocpu = NULL;
1656637a0070SStefano Zampini   B->offloadmask    = PETSC_OFFLOAD_CPU;
1657637a0070SStefano Zampini   PetscFunctionReturn(0);
1658637a0070SStefano Zampini }
1659637a0070SStefano Zampini 
1660637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDense_MPIDenseCUDA(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1661637a0070SStefano Zampini {
1662637a0070SStefano Zampini   Mat            B;
1663637a0070SStefano Zampini   Mat_MPIDense   *m;
1664637a0070SStefano Zampini 
1665637a0070SStefano Zampini   PetscFunctionBegin;
1666637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
16679566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(M,MAT_COPY_VALUES,newmat));
1668637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
16699566063dSJacob Faibussowitsch     PetscCall(MatCopy(M,*newmat,SAME_NONZERO_PATTERN));
1670637a0070SStefano Zampini   }
1671637a0070SStefano Zampini 
1672637a0070SStefano Zampini   B    = *newmat;
16739566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->defaultvectype));
16749566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(VECCUDA,&B->defaultvectype));
16759566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSECUDA));
16769566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",                    MatConvert_MPIDenseCUDA_MPIDense));
16779566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",        MatProductSetFromOptions_MPIAIJ_MPIDense));
16789566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
16799566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",        MatProductSetFromOptions_MPIDense_MPIAIJ));
16809566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
16819566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",                                MatDenseCUDAGetArray_MPIDenseCUDA));
16829566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",                            MatDenseCUDAGetArrayRead_MPIDenseCUDA));
16839566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",                           MatDenseCUDAGetArrayWrite_MPIDenseCUDA));
16849566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",                            MatDenseCUDARestoreArray_MPIDenseCUDA));
16859566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",                        MatDenseCUDARestoreArrayRead_MPIDenseCUDA));
16869566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",                       MatDenseCUDARestoreArrayWrite_MPIDenseCUDA));
16879566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",                              MatDenseCUDAPlaceArray_MPIDenseCUDA));
16889566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",                              MatDenseCUDAResetArray_MPIDenseCUDA));
16899566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",                            MatDenseCUDAReplaceArray_MPIDenseCUDA));
1690f5ff9c66SStefano Zampini   m    = (Mat_MPIDense*)(B->data);
1691637a0070SStefano Zampini   if (m->A) {
16929566063dSJacob Faibussowitsch     PetscCall(MatConvert(m->A,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&m->A));
1693637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_BOTH;
1694637a0070SStefano Zampini   } else {
1695637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_UNALLOCATED;
1696637a0070SStefano Zampini   }
16979566063dSJacob Faibussowitsch   PetscCall(MatBindToCPU_MPIDenseCUDA(B,PETSC_FALSE));
1698637a0070SStefano Zampini 
1699637a0070SStefano Zampini   B->ops->bindtocpu = MatBindToCPU_MPIDenseCUDA;
1700637a0070SStefano Zampini   PetscFunctionReturn(0);
1701637a0070SStefano Zampini }
1702637a0070SStefano Zampini #endif
1703637a0070SStefano Zampini 
17046947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
17056947451fSStefano Zampini {
17066947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17076947451fSStefano Zampini   PetscInt       lda;
17086947451fSStefano Zampini 
17096947451fSStefano Zampini   PetscFunctionBegin;
171028b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
171128b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17126947451fSStefano Zampini   if (!a->cvec) {
17139566063dSJacob Faibussowitsch     PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
17146947451fSStefano Zampini   }
17156947451fSStefano Zampini   a->vecinuse = col + 1;
17169566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
17179566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(a->A,(PetscScalar**)&a->ptrinuse));
17189566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
17196947451fSStefano Zampini   *v   = a->cvec;
17206947451fSStefano Zampini   PetscFunctionReturn(0);
17216947451fSStefano Zampini }
17226947451fSStefano Zampini 
17236947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
17246947451fSStefano Zampini {
17256947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17266947451fSStefano Zampini 
17276947451fSStefano Zampini   PetscFunctionBegin;
172828b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
172928b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
17306947451fSStefano Zampini   a->vecinuse = 0;
17319566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(a->A,(PetscScalar**)&a->ptrinuse));
17329566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
17336947451fSStefano Zampini   *v   = NULL;
17346947451fSStefano Zampini   PetscFunctionReturn(0);
17356947451fSStefano Zampini }
17366947451fSStefano Zampini 
17376947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
17386947451fSStefano Zampini {
17396947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17406947451fSStefano Zampini   PetscInt       lda;
17416947451fSStefano Zampini 
17426947451fSStefano Zampini   PetscFunctionBegin;
174328b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
174428b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17456947451fSStefano Zampini   if (!a->cvec) {
17469566063dSJacob Faibussowitsch     PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
17476947451fSStefano Zampini   }
17486947451fSStefano Zampini   a->vecinuse = col + 1;
17499566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
17509566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&a->ptrinuse));
17519566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
17529566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(a->cvec));
17536947451fSStefano Zampini   *v   = a->cvec;
17546947451fSStefano Zampini   PetscFunctionReturn(0);
17556947451fSStefano Zampini }
17566947451fSStefano Zampini 
17576947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
17586947451fSStefano Zampini {
17596947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17606947451fSStefano Zampini 
17616947451fSStefano Zampini   PetscFunctionBegin;
17625f80ce2aSJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
17635f80ce2aSJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
17646947451fSStefano Zampini   a->vecinuse = 0;
17659566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&a->ptrinuse));
17669566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(a->cvec));
17679566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
17686947451fSStefano Zampini   *v   = NULL;
17696947451fSStefano Zampini   PetscFunctionReturn(0);
17706947451fSStefano Zampini }
17716947451fSStefano Zampini 
17726947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
17736947451fSStefano Zampini {
17746947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17756947451fSStefano Zampini   PetscInt       lda;
17766947451fSStefano Zampini 
17776947451fSStefano Zampini   PetscFunctionBegin;
17785f80ce2aSJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
17795f80ce2aSJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17806947451fSStefano Zampini   if (!a->cvec) {
17819566063dSJacob Faibussowitsch     PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
17826947451fSStefano Zampini   }
17836947451fSStefano Zampini   a->vecinuse = col + 1;
17849566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
17859566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
17869566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
17876947451fSStefano Zampini   *v   = a->cvec;
17886947451fSStefano Zampini   PetscFunctionReturn(0);
17896947451fSStefano Zampini }
17906947451fSStefano Zampini 
17916947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
17926947451fSStefano Zampini {
17936947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
17946947451fSStefano Zampini 
17956947451fSStefano Zampini   PetscFunctionBegin;
17965f80ce2aSJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
17975f80ce2aSJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
17986947451fSStefano Zampini   a->vecinuse = 0;
17999566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
18009566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
18016947451fSStefano Zampini   *v   = NULL;
18026947451fSStefano Zampini   PetscFunctionReturn(0);
18036947451fSStefano Zampini }
18046947451fSStefano Zampini 
18055ea7661aSPierre Jolivet PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A,PetscInt cbegin,PetscInt cend,Mat *v)
18065ea7661aSPierre Jolivet {
18075ea7661aSPierre Jolivet   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
1808616b8fbbSStefano Zampini   Mat_MPIDense *c;
1809616b8fbbSStefano Zampini   MPI_Comm     comm;
18105ea7661aSPierre Jolivet 
18115ea7661aSPierre Jolivet   PetscFunctionBegin;
18129566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
18135f80ce2aSJacob Faibussowitsch   PetscCheck(!a->vecinuse,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
18145f80ce2aSJacob Faibussowitsch   PetscCheck(!a->matinuse,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18155ea7661aSPierre Jolivet   if (!a->cmat) {
18169566063dSJacob Faibussowitsch     PetscCall(MatCreate(comm,&a->cmat));
18179566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cmat));
18189566063dSJacob Faibussowitsch     PetscCall(MatSetType(a->cmat,((PetscObject)A)->type_name));
18199566063dSJacob Faibussowitsch     PetscCall(PetscLayoutReference(A->rmap,&a->cmat->rmap));
18209566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetSize(a->cmat->cmap,cend-cbegin));
18219566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(a->cmat->cmap));
1822616b8fbbSStefano Zampini   } else if (cend-cbegin != a->cmat->cmap->N) {
18239566063dSJacob Faibussowitsch     PetscCall(PetscLayoutDestroy(&a->cmat->cmap));
18249566063dSJacob Faibussowitsch     PetscCall(PetscLayoutCreate(comm,&a->cmat->cmap));
18259566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetSize(a->cmat->cmap,cend-cbegin));
18269566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(a->cmat->cmap));
18275ea7661aSPierre Jolivet   }
1828616b8fbbSStefano Zampini   c = (Mat_MPIDense*)a->cmat->data;
18295f80ce2aSJacob Faibussowitsch   PetscCheck(!c->A,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18309566063dSJacob Faibussowitsch   PetscCall(MatDenseGetSubMatrix(a->A,cbegin,cend,&c->A));
1831616b8fbbSStefano Zampini   a->cmat->preallocated = PETSC_TRUE;
1832616b8fbbSStefano Zampini   a->cmat->assembled = PETSC_TRUE;
18335ea7661aSPierre Jolivet   a->matinuse = cbegin + 1;
18345ea7661aSPierre Jolivet   *v = a->cmat;
18355ea7661aSPierre Jolivet   PetscFunctionReturn(0);
18365ea7661aSPierre Jolivet }
18375ea7661aSPierre Jolivet 
18385ea7661aSPierre Jolivet PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A,Mat *v)
18395ea7661aSPierre Jolivet {
18405ea7661aSPierre Jolivet   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
1841616b8fbbSStefano Zampini   Mat_MPIDense *c;
18425ea7661aSPierre Jolivet 
18435ea7661aSPierre Jolivet   PetscFunctionBegin;
18445f80ce2aSJacob Faibussowitsch   PetscCheck(a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetSubMatrix() first");
18455f80ce2aSJacob Faibussowitsch   PetscCheck(a->cmat,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal matrix");
18465f80ce2aSJacob Faibussowitsch   PetscCheck(*v == a->cmat,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Not the matrix obtained from MatDenseGetSubMatrix()");
18475ea7661aSPierre Jolivet   a->matinuse = 0;
1848616b8fbbSStefano Zampini   c = (Mat_MPIDense*)a->cmat->data;
18499566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreSubMatrix(a->A,&c->A));
18505ea7661aSPierre Jolivet   *v = NULL;
18515ea7661aSPierre Jolivet   PetscFunctionReturn(0);
18525ea7661aSPierre Jolivet }
18535ea7661aSPierre Jolivet 
1854002bc6daSRichard Tran Mills /*MC
1855002bc6daSRichard Tran Mills    MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices.
1856002bc6daSRichard Tran Mills 
1857002bc6daSRichard Tran Mills    Options Database Keys:
1858002bc6daSRichard Tran Mills . -mat_type mpidense - sets the matrix type to "mpidense" during a call to MatSetFromOptions()
1859002bc6daSRichard Tran Mills 
1860002bc6daSRichard Tran Mills   Level: beginner
1861002bc6daSRichard Tran Mills 
1862db781477SPatrick Sanan .seealso: `MatCreateDense()`
1863002bc6daSRichard Tran Mills 
1864002bc6daSRichard Tran Mills M*/
18658cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreate_MPIDense(Mat mat)
1866273d9f13SBarry Smith {
1867273d9f13SBarry Smith   Mat_MPIDense   *a;
1868273d9f13SBarry Smith 
1869273d9f13SBarry Smith   PetscFunctionBegin;
18709566063dSJacob Faibussowitsch   PetscCall(PetscNewLog(mat,&a));
1871b0a32e0cSBarry Smith   mat->data = (void*)a;
18729566063dSJacob Faibussowitsch   PetscCall(PetscMemcpy(mat->ops,&MatOps_Values,sizeof(struct _MatOps)));
1873273d9f13SBarry Smith 
1874273d9f13SBarry Smith   mat->insertmode = NOT_SET_VALUES;
1875273d9f13SBarry Smith 
1876273d9f13SBarry Smith   /* build cache for off array entries formed */
1877273d9f13SBarry Smith   a->donotstash = PETSC_FALSE;
18782205254eSKarl Rupp 
18799566063dSJacob Faibussowitsch   PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat),1,&mat->stash));
1880273d9f13SBarry Smith 
1881273d9f13SBarry Smith   /* stuff used for matrix vector multiply */
1882f4259b30SLisandro Dalcin   a->lvec        = NULL;
1883f4259b30SLisandro Dalcin   a->Mvctx       = NULL;
1884273d9f13SBarry Smith   a->roworiented = PETSC_TRUE;
1885273d9f13SBarry Smith 
18869566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",MatDenseGetLDA_MPIDense));
18879566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",MatDenseSetLDA_MPIDense));
18889566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",MatDenseGetArray_MPIDense));
18899566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",MatDenseRestoreArray_MPIDense));
18909566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",MatDenseGetArrayRead_MPIDense));
18919566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",MatDenseRestoreArrayRead_MPIDense));
18929566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",MatDenseGetArrayWrite_MPIDense));
18939566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",MatDenseRestoreArrayWrite_MPIDense));
18949566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",MatDensePlaceArray_MPIDense));
18959566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",MatDenseResetArray_MPIDense));
18969566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",MatDenseReplaceArray_MPIDense));
18979566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense));
18989566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense));
18999566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense));
19009566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense));
19019566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense));
19029566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense));
19039566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",MatDenseGetSubMatrix_MPIDense));
19049566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",MatDenseRestoreSubMatrix_MPIDense));
19059566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpiaij_mpidense_C",MatConvert_MPIAIJ_MPIDense));
19069566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpiaij_C",MatConvert_MPIDense_MPIAIJ));
19078baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
19089566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",MatConvert_MPIDense_Elemental));
19098baccfbdSHong Zhang #endif
1910d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
19119566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",MatConvert_Dense_ScaLAPACK));
1912d24d4204SJose E. Roman #endif
1913637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
19149566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpidensecuda_C",MatConvert_MPIDense_MPIDenseCUDA));
1915637a0070SStefano Zampini #endif
19169566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",MatMPIDenseSetPreallocation_MPIDense));
19179566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
19189566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
19196718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
19209566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
19219566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
19226718818eSStefano Zampini #endif
19238949adfdSHong Zhang 
19249566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",MatDenseGetColumn_MPIDense));
19259566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",MatDenseRestoreColumn_MPIDense));
19269566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)mat,MATMPIDENSE));
1927273d9f13SBarry Smith   PetscFunctionReturn(0);
1928273d9f13SBarry Smith }
1929273d9f13SBarry Smith 
1930209238afSKris Buschelman /*MC
1931637a0070SStefano Zampini    MATMPIDENSECUDA - MATMPIDENSECUDA = "mpidensecuda" - A matrix type to be used for distributed dense matrices on GPUs.
1932637a0070SStefano Zampini 
1933637a0070SStefano Zampini    Options Database Keys:
1934637a0070SStefano Zampini . -mat_type mpidensecuda - sets the matrix type to "mpidensecuda" during a call to MatSetFromOptions()
1935637a0070SStefano Zampini 
1936637a0070SStefano Zampini   Level: beginner
1937637a0070SStefano Zampini 
1938637a0070SStefano Zampini .seealso:
1939637a0070SStefano Zampini 
1940637a0070SStefano Zampini M*/
1941637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1942a4af0ceeSJacob Faibussowitsch #include <petsc/private/deviceimpl.h>
1943637a0070SStefano Zampini PETSC_EXTERN PetscErrorCode MatCreate_MPIDenseCUDA(Mat B)
1944637a0070SStefano Zampini {
1945637a0070SStefano Zampini   PetscFunctionBegin;
19469566063dSJacob Faibussowitsch   PetscCall(PetscDeviceInitialize(PETSC_DEVICE_CUDA));
19479566063dSJacob Faibussowitsch   PetscCall(MatCreate_MPIDense(B));
19489566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_MPIDenseCUDA(B,MATMPIDENSECUDA,MAT_INPLACE_MATRIX,&B));
1949637a0070SStefano Zampini   PetscFunctionReturn(0);
1950637a0070SStefano Zampini }
1951637a0070SStefano Zampini #endif
1952637a0070SStefano Zampini 
1953637a0070SStefano Zampini /*MC
1954002d173eSKris Buschelman    MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices.
1955209238afSKris Buschelman 
1956209238afSKris Buschelman    This matrix type is identical to MATSEQDENSE when constructed with a single process communicator,
1957209238afSKris Buschelman    and MATMPIDENSE otherwise.
1958209238afSKris Buschelman 
1959209238afSKris Buschelman    Options Database Keys:
1960209238afSKris Buschelman . -mat_type dense - sets the matrix type to "dense" during a call to MatSetFromOptions()
1961209238afSKris Buschelman 
1962209238afSKris Buschelman   Level: beginner
1963209238afSKris Buschelman 
1964db781477SPatrick Sanan .seealso: `MATSEQDENSE,MATMPIDENSE,MATDENSECUDA`
19656947451fSStefano Zampini M*/
19666947451fSStefano Zampini 
19676947451fSStefano Zampini /*MC
19686947451fSStefano Zampini    MATDENSECUDA - MATDENSECUDA = "densecuda" - A matrix type to be used for dense matrices on GPUs.
19696947451fSStefano Zampini 
19706947451fSStefano Zampini    This matrix type is identical to MATSEQDENSECUDA when constructed with a single process communicator,
19716947451fSStefano Zampini    and MATMPIDENSECUDA otherwise.
19726947451fSStefano Zampini 
19736947451fSStefano Zampini    Options Database Keys:
19746947451fSStefano Zampini . -mat_type densecuda - sets the matrix type to "densecuda" during a call to MatSetFromOptions()
19756947451fSStefano Zampini 
19766947451fSStefano Zampini   Level: beginner
19776947451fSStefano Zampini 
1978db781477SPatrick Sanan .seealso: `MATSEQDENSECUDA,MATMPIDENSECUDA,MATDENSE`
1979209238afSKris Buschelman M*/
1980209238afSKris Buschelman 
1981273d9f13SBarry Smith /*@C
1982273d9f13SBarry Smith    MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries
1983273d9f13SBarry Smith 
19848f490ea3SStefano Zampini    Collective
1985273d9f13SBarry Smith 
1986273d9f13SBarry Smith    Input Parameters:
19871c4f3114SJed Brown .  B - the matrix
19880298fd71SBarry Smith -  data - optional location of matrix data.  Set data=NULL for PETSc
1989273d9f13SBarry Smith    to control all matrix memory allocation.
1990273d9f13SBarry Smith 
1991273d9f13SBarry Smith    Notes:
1992273d9f13SBarry Smith    The dense format is fully compatible with standard Fortran 77
1993273d9f13SBarry Smith    storage by columns.
1994273d9f13SBarry Smith 
1995273d9f13SBarry Smith    The data input variable is intended primarily for Fortran programmers
1996273d9f13SBarry Smith    who wish to allocate their own matrix memory space.  Most users should
19970298fd71SBarry Smith    set data=NULL.
1998273d9f13SBarry Smith 
1999273d9f13SBarry Smith    Level: intermediate
2000273d9f13SBarry Smith 
2001db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()`
2002273d9f13SBarry Smith @*/
20031c4f3114SJed Brown PetscErrorCode  MatMPIDenseSetPreallocation(Mat B,PetscScalar *data)
2004273d9f13SBarry Smith {
2005273d9f13SBarry Smith   PetscFunctionBegin;
2006d5ea218eSStefano Zampini   PetscValidHeaderSpecific(B,MAT_CLASSID,1);
2007cac4c232SBarry Smith   PetscTryMethod(B,"MatMPIDenseSetPreallocation_C",(Mat,PetscScalar*),(B,data));
2008273d9f13SBarry Smith   PetscFunctionReturn(0);
2009273d9f13SBarry Smith }
2010273d9f13SBarry Smith 
2011d3042a70SBarry Smith /*@
2012637a0070SStefano Zampini    MatDensePlaceArray - Allows one to replace the array in a dense matrix with an
2013d3042a70SBarry Smith    array provided by the user. This is useful to avoid copying an array
2014d3042a70SBarry Smith    into a matrix
2015d3042a70SBarry Smith 
2016d3042a70SBarry Smith    Not Collective
2017d3042a70SBarry Smith 
2018d3042a70SBarry Smith    Input Parameters:
2019d3042a70SBarry Smith +  mat - the matrix
2020d3042a70SBarry Smith -  array - the array in column major order
2021d3042a70SBarry Smith 
2022d3042a70SBarry Smith    Notes:
2023d3042a70SBarry Smith    You can return to the original array with a call to MatDenseResetArray(). The user is responsible for freeing this array; it will not be
2024d3042a70SBarry Smith    freed when the matrix is destroyed.
2025d3042a70SBarry Smith 
2026d3042a70SBarry Smith    Level: developer
2027d3042a70SBarry Smith 
2028db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`
2029d3042a70SBarry Smith 
2030d3042a70SBarry Smith @*/
2031637a0070SStefano Zampini PetscErrorCode  MatDensePlaceArray(Mat mat,const PetscScalar *array)
2032d3042a70SBarry Smith {
2033d3042a70SBarry Smith   PetscFunctionBegin;
2034d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2035cac4c232SBarry Smith   PetscUseMethod(mat,"MatDensePlaceArray_C",(Mat,const PetscScalar*),(mat,array));
20369566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2037637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2038637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2039637a0070SStefano Zampini #endif
2040d3042a70SBarry Smith   PetscFunctionReturn(0);
2041d3042a70SBarry Smith }
2042d3042a70SBarry Smith 
2043d3042a70SBarry Smith /*@
2044d3042a70SBarry Smith    MatDenseResetArray - Resets the matrix array to that it previously had before the call to MatDensePlaceArray()
2045d3042a70SBarry Smith 
2046d3042a70SBarry Smith    Not Collective
2047d3042a70SBarry Smith 
2048d3042a70SBarry Smith    Input Parameters:
2049d3042a70SBarry Smith .  mat - the matrix
2050d3042a70SBarry Smith 
2051d3042a70SBarry Smith    Notes:
2052d3042a70SBarry Smith    You can only call this after a call to MatDensePlaceArray()
2053d3042a70SBarry Smith 
2054d3042a70SBarry Smith    Level: developer
2055d3042a70SBarry Smith 
2056db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`
2057d3042a70SBarry Smith 
2058d3042a70SBarry Smith @*/
2059d3042a70SBarry Smith PetscErrorCode  MatDenseResetArray(Mat mat)
2060d3042a70SBarry Smith {
2061d3042a70SBarry Smith   PetscFunctionBegin;
2062d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2063cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseResetArray_C",(Mat),(mat));
20649566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2065d3042a70SBarry Smith   PetscFunctionReturn(0);
2066d3042a70SBarry Smith }
2067d3042a70SBarry Smith 
2068d5ea218eSStefano Zampini /*@
2069d5ea218eSStefano Zampini    MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an
2070d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2071d5ea218eSStefano Zampini    into a matrix
2072d5ea218eSStefano Zampini 
2073d5ea218eSStefano Zampini    Not Collective
2074d5ea218eSStefano Zampini 
2075d5ea218eSStefano Zampini    Input Parameters:
2076d5ea218eSStefano Zampini +  mat - the matrix
2077d5ea218eSStefano Zampini -  array - the array in column major order
2078d5ea218eSStefano Zampini 
2079d5ea218eSStefano Zampini    Notes:
2080d5ea218eSStefano Zampini    The memory passed in MUST be obtained with PetscMalloc() and CANNOT be
2081d5ea218eSStefano Zampini    freed by the user. It will be freed when the matrix is destroyed.
2082d5ea218eSStefano Zampini 
2083d5ea218eSStefano Zampini    Level: developer
2084d5ea218eSStefano Zampini 
2085db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `VecReplaceArray()`
2086d5ea218eSStefano Zampini @*/
2087d5ea218eSStefano Zampini PetscErrorCode  MatDenseReplaceArray(Mat mat,const PetscScalar *array)
2088d5ea218eSStefano Zampini {
2089d5ea218eSStefano Zampini   PetscFunctionBegin;
2090d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2091cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseReplaceArray_C",(Mat,const PetscScalar*),(mat,array));
20929566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2093d5ea218eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
2094d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2095d5ea218eSStefano Zampini #endif
2096d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2097d5ea218eSStefano Zampini }
2098d5ea218eSStefano Zampini 
2099637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
21008965ea79SLois Curfman McInnes /*@C
2101637a0070SStefano Zampini    MatDenseCUDAPlaceArray - Allows one to replace the GPU array in a dense matrix with an
2102637a0070SStefano Zampini    array provided by the user. This is useful to avoid copying an array
2103637a0070SStefano Zampini    into a matrix
2104637a0070SStefano Zampini 
2105637a0070SStefano Zampini    Not Collective
2106637a0070SStefano Zampini 
2107637a0070SStefano Zampini    Input Parameters:
2108637a0070SStefano Zampini +  mat - the matrix
2109637a0070SStefano Zampini -  array - the array in column major order
2110637a0070SStefano Zampini 
2111637a0070SStefano Zampini    Notes:
2112637a0070SStefano Zampini    You can return to the original array with a call to MatDenseCUDAResetArray(). The user is responsible for freeing this array; it will not be
2113637a0070SStefano Zampini    freed when the matrix is destroyed. The array must have been allocated with cudaMalloc().
2114637a0070SStefano Zampini 
2115637a0070SStefano Zampini    Level: developer
2116637a0070SStefano Zampini 
2117db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAResetArray()`
2118637a0070SStefano Zampini @*/
2119637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAPlaceArray(Mat mat,const PetscScalar *array)
2120637a0070SStefano Zampini {
2121637a0070SStefano Zampini   PetscFunctionBegin;
2122d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2123cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseCUDAPlaceArray_C",(Mat,const PetscScalar*),(mat,array));
21249566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2125637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2126637a0070SStefano Zampini   PetscFunctionReturn(0);
2127637a0070SStefano Zampini }
2128637a0070SStefano Zampini 
2129637a0070SStefano Zampini /*@C
2130637a0070SStefano Zampini    MatDenseCUDAResetArray - Resets the matrix array to that it previously had before the call to MatDenseCUDAPlaceArray()
2131637a0070SStefano Zampini 
2132637a0070SStefano Zampini    Not Collective
2133637a0070SStefano Zampini 
2134637a0070SStefano Zampini    Input Parameters:
2135637a0070SStefano Zampini .  mat - the matrix
2136637a0070SStefano Zampini 
2137637a0070SStefano Zampini    Notes:
2138637a0070SStefano Zampini    You can only call this after a call to MatDenseCUDAPlaceArray()
2139637a0070SStefano Zampini 
2140637a0070SStefano Zampini    Level: developer
2141637a0070SStefano Zampini 
2142db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAPlaceArray()`
2143637a0070SStefano Zampini 
2144637a0070SStefano Zampini @*/
2145637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAResetArray(Mat mat)
2146637a0070SStefano Zampini {
2147637a0070SStefano Zampini   PetscFunctionBegin;
2148d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2149cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseCUDAResetArray_C",(Mat),(mat));
21509566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2151637a0070SStefano Zampini   PetscFunctionReturn(0);
2152637a0070SStefano Zampini }
2153637a0070SStefano Zampini 
2154637a0070SStefano Zampini /*@C
2155d5ea218eSStefano Zampini    MatDenseCUDAReplaceArray - Allows one to replace the GPU array in a dense matrix with an
2156d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2157d5ea218eSStefano Zampini    into a matrix
2158d5ea218eSStefano Zampini 
2159d5ea218eSStefano Zampini    Not Collective
2160d5ea218eSStefano Zampini 
2161d5ea218eSStefano Zampini    Input Parameters:
2162d5ea218eSStefano Zampini +  mat - the matrix
2163d5ea218eSStefano Zampini -  array - the array in column major order
2164d5ea218eSStefano Zampini 
2165d5ea218eSStefano Zampini    Notes:
2166d5ea218eSStefano Zampini    This permanently replaces the GPU array and frees the memory associated with the old GPU array.
2167d5ea218eSStefano Zampini    The memory passed in CANNOT be freed by the user. It will be freed
2168d5ea218eSStefano Zampini    when the matrix is destroyed. The array should respect the matrix leading dimension.
2169d5ea218eSStefano Zampini 
2170d5ea218eSStefano Zampini    Level: developer
2171d5ea218eSStefano Zampini 
2172db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAPlaceArray()`, `MatDenseCUDAResetArray()`
2173d5ea218eSStefano Zampini @*/
2174d5ea218eSStefano Zampini PetscErrorCode  MatDenseCUDAReplaceArray(Mat mat,const PetscScalar *array)
2175d5ea218eSStefano Zampini {
2176d5ea218eSStefano Zampini   PetscFunctionBegin;
2177d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2178cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseCUDAReplaceArray_C",(Mat,const PetscScalar*),(mat,array));
21799566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2180d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2181d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2182d5ea218eSStefano Zampini }
2183d5ea218eSStefano Zampini 
2184d5ea218eSStefano Zampini /*@C
2185637a0070SStefano Zampini    MatDenseCUDAGetArrayWrite - Provides write access to the CUDA buffer inside a dense matrix.
2186637a0070SStefano Zampini 
2187637a0070SStefano Zampini    Not Collective
2188637a0070SStefano Zampini 
2189637a0070SStefano Zampini    Input Parameters:
2190637a0070SStefano Zampini .  A - the matrix
2191637a0070SStefano Zampini 
2192637a0070SStefano Zampini    Output Parameters
2193637a0070SStefano Zampini .  array - the GPU array in column major order
2194637a0070SStefano Zampini 
2195637a0070SStefano Zampini    Notes:
2196637a0070SStefano Zampini    The data on the GPU may not be updated due to operations done on the CPU. If you need updated data, use MatDenseCUDAGetArray(). The array must be restored with MatDenseCUDARestoreArrayWrite() when no longer needed.
2197637a0070SStefano Zampini 
2198637a0070SStefano Zampini    Level: developer
2199637a0070SStefano Zampini 
2200db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayRead()`, `MatDenseCUDARestoreArrayRead()`
2201637a0070SStefano Zampini @*/
2202637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayWrite(Mat A, PetscScalar **a)
2203637a0070SStefano Zampini {
2204637a0070SStefano Zampini   PetscFunctionBegin;
2205d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2206cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDAGetArrayWrite_C",(Mat,PetscScalar**),(A,a));
22079566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2208637a0070SStefano Zampini   PetscFunctionReturn(0);
2209637a0070SStefano Zampini }
2210637a0070SStefano Zampini 
2211637a0070SStefano Zampini /*@C
2212637a0070SStefano Zampini    MatDenseCUDARestoreArrayWrite - Restore write access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArrayWrite().
2213637a0070SStefano Zampini 
2214637a0070SStefano Zampini    Not Collective
2215637a0070SStefano Zampini 
2216637a0070SStefano Zampini    Input Parameters:
2217637a0070SStefano Zampini +  A - the matrix
2218637a0070SStefano Zampini -  array - the GPU array in column major order
2219637a0070SStefano Zampini 
2220637a0070SStefano Zampini    Notes:
2221637a0070SStefano Zampini 
2222637a0070SStefano Zampini    Level: developer
2223637a0070SStefano Zampini 
2224db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`, `MatDenseCUDAGetArrayRead()`
2225637a0070SStefano Zampini @*/
2226637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayWrite(Mat A, PetscScalar **a)
2227637a0070SStefano Zampini {
2228637a0070SStefano Zampini   PetscFunctionBegin;
2229d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2230cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDARestoreArrayWrite_C",(Mat,PetscScalar**),(A,a));
22319566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2232637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2233637a0070SStefano Zampini   PetscFunctionReturn(0);
2234637a0070SStefano Zampini }
2235637a0070SStefano Zampini 
2236637a0070SStefano Zampini /*@C
2237637a0070SStefano Zampini    MatDenseCUDAGetArrayRead - Provides read-only access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArrayRead() when no longer needed.
2238637a0070SStefano Zampini 
2239637a0070SStefano Zampini    Not Collective
2240637a0070SStefano Zampini 
2241637a0070SStefano Zampini    Input Parameters:
2242637a0070SStefano Zampini .  A - the matrix
2243637a0070SStefano Zampini 
2244637a0070SStefano Zampini    Output Parameters
2245637a0070SStefano Zampini .  array - the GPU array in column major order
2246637a0070SStefano Zampini 
2247637a0070SStefano Zampini    Notes:
2248637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2249637a0070SStefano Zampini 
2250637a0070SStefano Zampini    Level: developer
2251637a0070SStefano Zampini 
2252db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`
2253637a0070SStefano Zampini @*/
2254637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayRead(Mat A, const PetscScalar **a)
2255637a0070SStefano Zampini {
2256637a0070SStefano Zampini   PetscFunctionBegin;
2257d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2258cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDAGetArrayRead_C",(Mat,const PetscScalar**),(A,a));
2259637a0070SStefano Zampini   PetscFunctionReturn(0);
2260637a0070SStefano Zampini }
2261637a0070SStefano Zampini 
2262637a0070SStefano Zampini /*@C
2263637a0070SStefano Zampini    MatDenseCUDARestoreArrayRead - Restore read-only access to the CUDA buffer inside a dense matrix previously obtained with a call to MatDenseCUDAGetArrayRead().
2264637a0070SStefano Zampini 
2265637a0070SStefano Zampini    Not Collective
2266637a0070SStefano Zampini 
2267637a0070SStefano Zampini    Input Parameters:
2268637a0070SStefano Zampini +  A - the matrix
2269637a0070SStefano Zampini -  array - the GPU array in column major order
2270637a0070SStefano Zampini 
2271637a0070SStefano Zampini    Notes:
2272637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2273637a0070SStefano Zampini 
2274637a0070SStefano Zampini    Level: developer
2275637a0070SStefano Zampini 
2276db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDAGetArrayRead()`
2277637a0070SStefano Zampini @*/
2278637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayRead(Mat A, const PetscScalar **a)
2279637a0070SStefano Zampini {
2280637a0070SStefano Zampini   PetscFunctionBegin;
2281cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDARestoreArrayRead_C",(Mat,const PetscScalar**),(A,a));
2282637a0070SStefano Zampini   PetscFunctionReturn(0);
2283637a0070SStefano Zampini }
2284637a0070SStefano Zampini 
2285637a0070SStefano Zampini /*@C
2286637a0070SStefano Zampini    MatDenseCUDAGetArray - Provides access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArray() when no longer needed.
2287637a0070SStefano Zampini 
2288637a0070SStefano Zampini    Not Collective
2289637a0070SStefano Zampini 
2290637a0070SStefano Zampini    Input Parameters:
2291637a0070SStefano Zampini .  A - the matrix
2292637a0070SStefano Zampini 
2293637a0070SStefano Zampini    Output Parameters
2294637a0070SStefano Zampini .  array - the GPU array in column major order
2295637a0070SStefano Zampini 
2296637a0070SStefano Zampini    Notes:
2297637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite(). For read-only access, use MatDenseCUDAGetArrayRead().
2298637a0070SStefano Zampini 
2299637a0070SStefano Zampini    Level: developer
2300637a0070SStefano Zampini 
2301db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArrayRead()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`
2302637a0070SStefano Zampini @*/
2303637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArray(Mat A, PetscScalar **a)
2304637a0070SStefano Zampini {
2305637a0070SStefano Zampini   PetscFunctionBegin;
2306d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2307cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDAGetArray_C",(Mat,PetscScalar**),(A,a));
23089566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2309637a0070SStefano Zampini   PetscFunctionReturn(0);
2310637a0070SStefano Zampini }
2311637a0070SStefano Zampini 
2312637a0070SStefano Zampini /*@C
2313637a0070SStefano Zampini    MatDenseCUDARestoreArray - Restore access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArray().
2314637a0070SStefano Zampini 
2315637a0070SStefano Zampini    Not Collective
2316637a0070SStefano Zampini 
2317637a0070SStefano Zampini    Input Parameters:
2318637a0070SStefano Zampini +  A - the matrix
2319637a0070SStefano Zampini -  array - the GPU array in column major order
2320637a0070SStefano Zampini 
2321637a0070SStefano Zampini    Notes:
2322637a0070SStefano Zampini 
2323637a0070SStefano Zampini    Level: developer
2324637a0070SStefano Zampini 
2325db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`, `MatDenseCUDAGetArrayRead()`
2326637a0070SStefano Zampini @*/
2327637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArray(Mat A, PetscScalar **a)
2328637a0070SStefano Zampini {
2329637a0070SStefano Zampini   PetscFunctionBegin;
2330d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2331cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDARestoreArray_C",(Mat,PetscScalar**),(A,a));
23329566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2333637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2334637a0070SStefano Zampini   PetscFunctionReturn(0);
2335637a0070SStefano Zampini }
2336637a0070SStefano Zampini #endif
2337637a0070SStefano Zampini 
2338637a0070SStefano Zampini /*@C
2339637a0070SStefano Zampini    MatCreateDense - Creates a matrix in dense format.
23408965ea79SLois Curfman McInnes 
2341d083f849SBarry Smith    Collective
2342db81eaa0SLois Curfman McInnes 
23438965ea79SLois Curfman McInnes    Input Parameters:
2344db81eaa0SLois Curfman McInnes +  comm - MPI communicator
23458965ea79SLois Curfman McInnes .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2346db81eaa0SLois Curfman McInnes .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
23478965ea79SLois Curfman McInnes .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2348db81eaa0SLois Curfman McInnes .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
23496cfe35ddSJose E. Roman -  data - optional location of matrix data.  Set data=NULL (PETSC_NULL_SCALAR for Fortran users) for PETSc
2350dfc5480cSLois Curfman McInnes    to control all matrix memory allocation.
23518965ea79SLois Curfman McInnes 
23528965ea79SLois Curfman McInnes    Output Parameter:
2353477f1c0bSLois Curfman McInnes .  A - the matrix
23548965ea79SLois Curfman McInnes 
2355b259b22eSLois Curfman McInnes    Notes:
235639ddd567SLois Curfman McInnes    The dense format is fully compatible with standard Fortran 77
235739ddd567SLois Curfman McInnes    storage by columns.
2358002bc6daSRichard Tran Mills    Note that, although local portions of the matrix are stored in column-major
2359002bc6daSRichard Tran Mills    order, the matrix is partitioned across MPI ranks by row.
23608965ea79SLois Curfman McInnes 
236118f449edSLois Curfman McInnes    The data input variable is intended primarily for Fortran programmers
236218f449edSLois Curfman McInnes    who wish to allocate their own matrix memory space.  Most users should
23636cfe35ddSJose E. Roman    set data=NULL (PETSC_NULL_SCALAR for Fortran users).
236418f449edSLois Curfman McInnes 
23658965ea79SLois Curfman McInnes    The user MUST specify either the local or global matrix dimensions
23668965ea79SLois Curfman McInnes    (possibly both).
23678965ea79SLois Curfman McInnes 
2368027ccd11SLois Curfman McInnes    Level: intermediate
2369027ccd11SLois Curfman McInnes 
2370db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()`
23718965ea79SLois Curfman McInnes @*/
237269b1f4b7SBarry Smith PetscErrorCode  MatCreateDense(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
23738965ea79SLois Curfman McInnes {
23743a40ed3dSBarry Smith   PetscFunctionBegin;
23759566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm,A));
23769566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A,m,n,M,N));
23776f08ad05SPierre Jolivet   PetscCall(MatSetType(*A,MATDENSE));
23789566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseSetPreallocation(*A,data));
23796f08ad05SPierre Jolivet   PetscCall(MatMPIDenseSetPreallocation(*A,data));
23803a40ed3dSBarry Smith   PetscFunctionReturn(0);
23818965ea79SLois Curfman McInnes }
23828965ea79SLois Curfman McInnes 
2383637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2384637a0070SStefano Zampini /*@C
2385637a0070SStefano Zampini    MatCreateDenseCUDA - Creates a matrix in dense format using CUDA.
2386637a0070SStefano Zampini 
2387637a0070SStefano Zampini    Collective
2388637a0070SStefano Zampini 
2389637a0070SStefano Zampini    Input Parameters:
2390637a0070SStefano Zampini +  comm - MPI communicator
2391637a0070SStefano Zampini .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2392637a0070SStefano Zampini .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
2393637a0070SStefano Zampini .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2394637a0070SStefano Zampini .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
2395637a0070SStefano Zampini -  data - optional location of GPU matrix data.  Set data=NULL for PETSc
2396637a0070SStefano Zampini    to control matrix memory allocation.
2397637a0070SStefano Zampini 
2398637a0070SStefano Zampini    Output Parameter:
2399637a0070SStefano Zampini .  A - the matrix
2400637a0070SStefano Zampini 
2401637a0070SStefano Zampini    Notes:
2402637a0070SStefano Zampini 
2403637a0070SStefano Zampini    Level: intermediate
2404637a0070SStefano Zampini 
2405db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateDense()`
2406637a0070SStefano Zampini @*/
2407637a0070SStefano Zampini PetscErrorCode  MatCreateDenseCUDA(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
2408637a0070SStefano Zampini {
2409637a0070SStefano Zampini   PetscFunctionBegin;
24109566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm,A));
2411637a0070SStefano Zampini   PetscValidLogicalCollectiveBool(*A,!!data,6);
24129566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A,m,n,M,N));
24136f08ad05SPierre Jolivet   PetscCall(MatSetType(*A,MATDENSECUDA));
24149566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseCUDASetPreallocation(*A,data));
24156f08ad05SPierre Jolivet   PetscCall(MatMPIDenseCUDASetPreallocation(*A,data));
2416637a0070SStefano Zampini   PetscFunctionReturn(0);
2417637a0070SStefano Zampini }
2418637a0070SStefano Zampini #endif
2419637a0070SStefano Zampini 
24206849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat A,MatDuplicateOption cpvalues,Mat *newmat)
24218965ea79SLois Curfman McInnes {
24228965ea79SLois Curfman McInnes   Mat            mat;
24233501a2bdSLois Curfman McInnes   Mat_MPIDense   *a,*oldmat = (Mat_MPIDense*)A->data;
24248965ea79SLois Curfman McInnes 
24253a40ed3dSBarry Smith   PetscFunctionBegin;
2426f4259b30SLisandro Dalcin   *newmat = NULL;
24279566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&mat));
24289566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(mat,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N));
24299566063dSJacob Faibussowitsch   PetscCall(MatSetType(mat,((PetscObject)A)->type_name));
2430834f8fabSBarry Smith   a       = (Mat_MPIDense*)mat->data;
24315aa7edbeSHong Zhang 
2432d5f3da31SBarry Smith   mat->factortype   = A->factortype;
2433c456f294SBarry Smith   mat->assembled    = PETSC_TRUE;
2434273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
24358965ea79SLois Curfman McInnes 
2436e0fa3b82SLois Curfman McInnes   mat->insertmode = NOT_SET_VALUES;
24373782ba37SSatish Balay   a->donotstash   = oldmat->donotstash;
2438e04c1aa4SHong Zhang 
24399566063dSJacob Faibussowitsch   PetscCall(PetscLayoutReference(A->rmap,&mat->rmap));
24409566063dSJacob Faibussowitsch   PetscCall(PetscLayoutReference(A->cmap,&mat->cmap));
24418965ea79SLois Curfman McInnes 
24429566063dSJacob Faibussowitsch   PetscCall(MatDuplicate(oldmat->A,cpvalues,&a->A));
24439566063dSJacob Faibussowitsch   PetscCall(PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A));
244401b82886SBarry Smith 
24458965ea79SLois Curfman McInnes   *newmat = mat;
24463a40ed3dSBarry Smith   PetscFunctionReturn(0);
24478965ea79SLois Curfman McInnes }
24488965ea79SLois Curfman McInnes 
2449eb91f321SVaclav Hapla PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer)
2450eb91f321SVaclav Hapla {
245187d5ce66SSatish Balay   PetscBool      isbinary;
245287d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
245387d5ce66SSatish Balay   PetscBool      ishdf5;
245487d5ce66SSatish Balay #endif
2455eb91f321SVaclav Hapla 
2456eb91f321SVaclav Hapla   PetscFunctionBegin;
2457eb91f321SVaclav Hapla   PetscValidHeaderSpecific(newMat,MAT_CLASSID,1);
2458eb91f321SVaclav Hapla   PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2);
2459eb91f321SVaclav Hapla   /* force binary viewer to load .info file if it has not yet done so */
24609566063dSJacob Faibussowitsch   PetscCall(PetscViewerSetUp(viewer));
24619566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary));
246287d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
24639566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERHDF5,  &ishdf5));
246487d5ce66SSatish Balay #endif
2465eb91f321SVaclav Hapla   if (isbinary) {
24669566063dSJacob Faibussowitsch     PetscCall(MatLoad_Dense_Binary(newMat,viewer));
2467eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5)
246887d5ce66SSatish Balay   } else if (ishdf5) {
24699566063dSJacob Faibussowitsch     PetscCall(MatLoad_Dense_HDF5(newMat,viewer));
2470eb91f321SVaclav Hapla #endif
247198921bdaSJacob Faibussowitsch   } else SETERRQ(PetscObjectComm((PetscObject)newMat),PETSC_ERR_SUP,"Viewer type %s not yet supported for reading %s matrices",((PetscObject)viewer)->type_name,((PetscObject)newMat)->type_name);
2472eb91f321SVaclav Hapla   PetscFunctionReturn(0);
2473eb91f321SVaclav Hapla }
2474eb91f321SVaclav Hapla 
24756718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat A,Mat B,PetscBool *flag)
24766e4ee0c6SHong Zhang {
24776e4ee0c6SHong Zhang   Mat_MPIDense   *matB = (Mat_MPIDense*)B->data,*matA = (Mat_MPIDense*)A->data;
24786e4ee0c6SHong Zhang   Mat            a,b;
247990ace30eSBarry Smith 
24806e4ee0c6SHong Zhang   PetscFunctionBegin;
24816e4ee0c6SHong Zhang   a    = matA->A;
24826e4ee0c6SHong Zhang   b    = matB->A;
24832cf15c64SPierre Jolivet   PetscCall(MatEqual(a,b,flag));
24842cf15c64SPierre Jolivet   PetscCall(MPIU_Allreduce(MPI_IN_PLACE,flag,1,MPIU_BOOL,MPI_LAND,PetscObjectComm((PetscObject)A)));
24856e4ee0c6SHong Zhang   PetscFunctionReturn(0);
24866e4ee0c6SHong Zhang }
248790ace30eSBarry Smith 
24886718818eSStefano Zampini PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data)
2489baa3c1c6SHong Zhang {
24906718818eSStefano Zampini   Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data;
2491baa3c1c6SHong Zhang 
2492baa3c1c6SHong Zhang   PetscFunctionBegin;
24939566063dSJacob Faibussowitsch   PetscCall(PetscFree2(atb->sendbuf,atb->recvcounts));
24949566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&atb->atb));
24959566063dSJacob Faibussowitsch   PetscCall(PetscFree(atb));
2496baa3c1c6SHong Zhang   PetscFunctionReturn(0);
2497baa3c1c6SHong Zhang }
2498baa3c1c6SHong Zhang 
24996718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data)
2500cc48ffa7SToby Isaac {
25016718818eSStefano Zampini   Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data;
2502cc48ffa7SToby Isaac 
2503cc48ffa7SToby Isaac   PetscFunctionBegin;
25049566063dSJacob Faibussowitsch   PetscCall(PetscFree2(abt->buf[0],abt->buf[1]));
25059566063dSJacob Faibussowitsch   PetscCall(PetscFree2(abt->recvcounts,abt->recvdispls));
25069566063dSJacob Faibussowitsch   PetscCall(PetscFree(abt));
2507cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2508cc48ffa7SToby Isaac }
2509cc48ffa7SToby Isaac 
25106718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2511cb20be35SHong Zhang {
2512baa3c1c6SHong Zhang   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
25136718818eSStefano Zampini   Mat_TransMatMultDense *atb;
2514cb20be35SHong Zhang   MPI_Comm              comm;
25156718818eSStefano Zampini   PetscMPIInt           size,*recvcounts;
25166718818eSStefano Zampini   PetscScalar           *carray,*sendbuf;
2517637a0070SStefano Zampini   const PetscScalar     *atbarray;
2518a1f9a5e6SStefano Zampini   PetscInt              i,cN=C->cmap->N,proc,k,j,lda;
2519e68c0b26SHong Zhang   const PetscInt        *ranges;
2520cb20be35SHong Zhang 
2521cb20be35SHong Zhang   PetscFunctionBegin;
25226718818eSStefano Zampini   MatCheckProduct(C,3);
25235f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
25246718818eSStefano Zampini   atb = (Mat_TransMatMultDense *)C->product->data;
25256718818eSStefano Zampini   recvcounts = atb->recvcounts;
25266718818eSStefano Zampini   sendbuf = atb->sendbuf;
25276718818eSStefano Zampini 
25289566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
25299566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
2530e68c0b26SHong Zhang 
2531c5ef1628SHong Zhang   /* compute atbarray = aseq^T * bseq */
25329566063dSJacob Faibussowitsch   PetscCall(MatTransposeMatMult(a->A,b->A,atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX,PETSC_DEFAULT,&atb->atb));
2533cb20be35SHong Zhang 
25349566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(C,&ranges));
2535cb20be35SHong Zhang 
2536660d5466SHong Zhang   /* arrange atbarray into sendbuf */
25379566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(atb->atb,&atbarray));
25389566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(atb->atb,&lda));
2539637a0070SStefano Zampini   for (proc=0, k=0; proc<size; proc++) {
2540baa3c1c6SHong Zhang     for (j=0; j<cN; j++) {
2541a1f9a5e6SStefano Zampini       for (i=ranges[proc]; i<ranges[proc+1]; i++) sendbuf[k++] = atbarray[i+j*lda];
2542cb20be35SHong Zhang     }
2543cb20be35SHong Zhang   }
25449566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(atb->atb,&atbarray));
2545637a0070SStefano Zampini 
2546c5ef1628SHong Zhang   /* sum all atbarray to local values of C */
25479566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A,&carray));
25489566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Reduce_scatter(sendbuf,carray,recvcounts,MPIU_SCALAR,MPIU_SUM,comm));
25499566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A,&carray));
25509566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
25519566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2552cb20be35SHong Zhang   PetscFunctionReturn(0);
2553cb20be35SHong Zhang }
2554cb20be35SHong Zhang 
25556718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2556cb20be35SHong Zhang {
2557cb20be35SHong Zhang   MPI_Comm              comm;
2558baa3c1c6SHong Zhang   PetscMPIInt           size;
2559660d5466SHong Zhang   PetscInt              cm=A->cmap->n,cM,cN=B->cmap->N;
2560baa3c1c6SHong Zhang   Mat_TransMatMultDense *atb;
25616718818eSStefano Zampini   PetscBool             cisdense;
25620acaeb71SStefano Zampini   PetscInt              i;
25630acaeb71SStefano Zampini   const PetscInt        *ranges;
2564cb20be35SHong Zhang 
2565cb20be35SHong Zhang   PetscFunctionBegin;
25666718818eSStefano Zampini   MatCheckProduct(C,3);
25675f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
25689566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
2569cb20be35SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) {
257098921bdaSJacob Faibussowitsch     SETERRQ(comm,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2571cb20be35SHong Zhang   }
2572cb20be35SHong Zhang 
25734222ddf1SHong Zhang   /* create matrix product C */
25749566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C,cm,B->cmap->n,A->cmap->N,B->cmap->N));
25759566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompareAny((PetscObject)C,&cisdense,MATMPIDENSE,MATMPIDENSECUDA,""));
25766718818eSStefano Zampini   if (!cisdense) {
25779566063dSJacob Faibussowitsch     PetscCall(MatSetType(C,((PetscObject)A)->type_name));
25786718818eSStefano Zampini   }
25799566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
2580baa3c1c6SHong Zhang 
25814222ddf1SHong Zhang   /* create data structure for reuse C */
25829566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
25839566063dSJacob Faibussowitsch   PetscCall(PetscNew(&atb));
25844222ddf1SHong Zhang   cM   = C->rmap->N;
25859566063dSJacob Faibussowitsch   PetscCall(PetscMalloc2(cM*cN,&atb->sendbuf,size,&atb->recvcounts));
25869566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(C,&ranges));
25870acaeb71SStefano Zampini   for (i=0; i<size; i++) atb->recvcounts[i] = (ranges[i+1] - ranges[i])*cN;
2588baa3c1c6SHong Zhang 
25896718818eSStefano Zampini   C->product->data    = atb;
25906718818eSStefano Zampini   C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense;
2591cb20be35SHong Zhang   PetscFunctionReturn(0);
2592cb20be35SHong Zhang }
2593cb20be35SHong Zhang 
25944222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C)
2595cb20be35SHong Zhang {
2596cc48ffa7SToby Isaac   MPI_Comm              comm;
2597cc48ffa7SToby Isaac   PetscMPIInt           i, size;
2598cc48ffa7SToby Isaac   PetscInt              maxRows, bufsiz;
2599cc48ffa7SToby Isaac   PetscMPIInt           tag;
26004222ddf1SHong Zhang   PetscInt              alg;
2601cc48ffa7SToby Isaac   Mat_MatTransMultDense *abt;
26024222ddf1SHong Zhang   Mat_Product           *product = C->product;
26034222ddf1SHong Zhang   PetscBool             flg;
2604cc48ffa7SToby Isaac 
2605cc48ffa7SToby Isaac   PetscFunctionBegin;
26066718818eSStefano Zampini   MatCheckProduct(C,4);
26075f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
26084222ddf1SHong Zhang   /* check local size of A and B */
26095f80ce2aSJacob Faibussowitsch   PetscCheck(A->cmap->n == B->cmap->n,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")",A->cmap->n,B->cmap->n);
2610cc48ffa7SToby Isaac 
26119566063dSJacob Faibussowitsch   PetscCall(PetscStrcmp(product->alg,"allgatherv",&flg));
2612637a0070SStefano Zampini   alg  = flg ? 0 : 1;
2613cc48ffa7SToby Isaac 
26144222ddf1SHong Zhang   /* setup matrix product C */
26159566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C,A->rmap->n,B->rmap->n,A->rmap->N,B->rmap->N));
26169566063dSJacob Faibussowitsch   PetscCall(MatSetType(C,MATMPIDENSE));
26179566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
26189566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetNewTag((PetscObject)C,&tag));
26194222ddf1SHong Zhang 
26204222ddf1SHong Zhang   /* create data structure for reuse C */
26219566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)C,&comm));
26229566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
26239566063dSJacob Faibussowitsch   PetscCall(PetscNew(&abt));
2624cc48ffa7SToby Isaac   abt->tag = tag;
2625faa55883SToby Isaac   abt->alg = alg;
2626faa55883SToby Isaac   switch (alg) {
26274222ddf1SHong Zhang   case 1: /* alg: "cyclic" */
2628cc48ffa7SToby Isaac     for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i]));
2629cc48ffa7SToby Isaac     bufsiz = A->cmap->N * maxRows;
26309566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(bufsiz,&(abt->buf[0]),bufsiz,&(abt->buf[1])));
2631faa55883SToby Isaac     break;
26324222ddf1SHong Zhang   default: /* alg: "allgatherv" */
26339566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &(abt->buf[0]), B->rmap->N * B->cmap->N, &(abt->buf[1])));
26349566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(size,&(abt->recvcounts),size+1,&(abt->recvdispls)));
2635faa55883SToby Isaac     for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N;
2636faa55883SToby Isaac     for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i];
2637faa55883SToby Isaac     break;
2638faa55883SToby Isaac   }
2639cc48ffa7SToby Isaac 
26406718818eSStefano Zampini   C->product->data    = abt;
26416718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense;
26424222ddf1SHong Zhang   C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense;
2643cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2644cc48ffa7SToby Isaac }
2645cc48ffa7SToby Isaac 
2646faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C)
2647cc48ffa7SToby Isaac {
2648cc48ffa7SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
26496718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2650cc48ffa7SToby Isaac   MPI_Comm              comm;
2651cc48ffa7SToby Isaac   PetscMPIInt           rank,size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom;
2652f4259b30SLisandro Dalcin   PetscScalar           *sendbuf, *recvbuf=NULL, *cv;
2653cc48ffa7SToby Isaac   PetscInt              i,cK=A->cmap->N,k,j,bn;
2654cc48ffa7SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2655637a0070SStefano Zampini   const PetscScalar     *av,*bv;
265623fff9afSBarry Smith   PetscBLASInt          cm, cn, ck, alda, blda = 0, clda;
2657cc48ffa7SToby Isaac   MPI_Request           reqs[2];
2658cc48ffa7SToby Isaac   const PetscInt        *ranges;
2659cc48ffa7SToby Isaac 
2660cc48ffa7SToby Isaac   PetscFunctionBegin;
26616718818eSStefano Zampini   MatCheckProduct(C,3);
26625f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
26636718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
26649566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)C,&comm));
26659566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_rank(comm,&rank));
26669566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
26679566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&av));
26689566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(b->A,&bv));
26699566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A,&cv));
26709566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&i));
26719566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&alda));
26729566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(b->A,&i));
26739566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&blda));
26749566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(c->A,&i));
26759566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&clda));
26769566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(B,&ranges));
2677cc48ffa7SToby Isaac   bn   = B->rmap->n;
2678637a0070SStefano Zampini   if (blda == bn) {
2679637a0070SStefano Zampini     sendbuf = (PetscScalar*)bv;
2680cc48ffa7SToby Isaac   } else {
2681cc48ffa7SToby Isaac     sendbuf = abt->buf[0];
2682cc48ffa7SToby Isaac     for (k = 0, i = 0; i < cK; i++) {
2683cc48ffa7SToby Isaac       for (j = 0; j < bn; j++, k++) {
2684637a0070SStefano Zampini         sendbuf[k] = bv[i * blda + j];
2685cc48ffa7SToby Isaac       }
2686cc48ffa7SToby Isaac     }
2687cc48ffa7SToby Isaac   }
2688cc48ffa7SToby Isaac   if (size > 1) {
2689cc48ffa7SToby Isaac     sendto = (rank + size - 1) % size;
2690cc48ffa7SToby Isaac     recvfrom = (rank + size + 1) % size;
2691cc48ffa7SToby Isaac   } else {
2692cc48ffa7SToby Isaac     sendto = recvfrom = 0;
2693cc48ffa7SToby Isaac   }
26949566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(cK,&ck));
26959566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->rmap->n,&cm));
2696cc48ffa7SToby Isaac   recvisfrom = rank;
2697cc48ffa7SToby Isaac   for (i = 0; i < size; i++) {
2698cc48ffa7SToby Isaac     /* we have finished receiving in sending, bufs can be read/modified */
2699cc48ffa7SToby Isaac     PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */
2700cc48ffa7SToby Isaac     PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom];
2701cc48ffa7SToby Isaac 
2702cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2703cc48ffa7SToby Isaac       /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */
2704cc48ffa7SToby Isaac       sendsiz = cK * bn;
2705cc48ffa7SToby Isaac       recvsiz = cK * nextbn;
2706cc48ffa7SToby Isaac       recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1];
27079566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0]));
27089566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1]));
2709cc48ffa7SToby Isaac     }
2710cc48ffa7SToby Isaac 
2711cc48ffa7SToby Isaac     /* local aseq * sendbuf^T */
27129566063dSJacob Faibussowitsch     PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn));
271350ce3c9cSStefano Zampini     if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","T",&cm,&cn,&ck,&_DOne,av,&alda,sendbuf,&cn,&_DZero,cv + clda * ranges[recvisfrom],&clda));
2714cc48ffa7SToby Isaac 
2715cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2716cc48ffa7SToby Isaac       /* wait for the sends and receives to complete, swap sendbuf and recvbuf */
27179566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE));
2718cc48ffa7SToby Isaac     }
2719cc48ffa7SToby Isaac     bn = nextbn;
2720cc48ffa7SToby Isaac     recvisfrom = nextrecvisfrom;
2721cc48ffa7SToby Isaac     sendbuf = recvbuf;
2722cc48ffa7SToby Isaac   }
27239566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&av));
27249566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A,&bv));
27259566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A,&cv));
27269566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
27279566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2728cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2729cc48ffa7SToby Isaac }
2730cc48ffa7SToby Isaac 
2731faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C)
2732faa55883SToby Isaac {
2733faa55883SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
27346718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2735faa55883SToby Isaac   MPI_Comm              comm;
2736637a0070SStefano Zampini   PetscMPIInt           size;
2737637a0070SStefano Zampini   PetscScalar           *cv, *sendbuf, *recvbuf;
2738637a0070SStefano Zampini   const PetscScalar     *av,*bv;
2739637a0070SStefano Zampini   PetscInt              blda,i,cK=A->cmap->N,k,j,bn;
2740faa55883SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2741637a0070SStefano Zampini   PetscBLASInt          cm, cn, ck, alda, clda;
2742faa55883SToby Isaac 
2743faa55883SToby Isaac   PetscFunctionBegin;
27446718818eSStefano Zampini   MatCheckProduct(C,3);
27455f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
27466718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
27479566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
27489566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
27499566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&av));
27509566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(b->A,&bv));
27519566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A,&cv));
27529566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&i));
27539566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&alda));
27549566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(b->A,&blda));
27559566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(c->A,&i));
27569566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&clda));
2757faa55883SToby Isaac   /* copy transpose of B into buf[0] */
2758faa55883SToby Isaac   bn      = B->rmap->n;
2759faa55883SToby Isaac   sendbuf = abt->buf[0];
2760faa55883SToby Isaac   recvbuf = abt->buf[1];
2761faa55883SToby Isaac   for (k = 0, j = 0; j < bn; j++) {
2762faa55883SToby Isaac     for (i = 0; i < cK; i++, k++) {
2763637a0070SStefano Zampini       sendbuf[k] = bv[i * blda + j];
2764faa55883SToby Isaac     }
2765faa55883SToby Isaac   }
27669566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A,&bv));
27679566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm));
27689566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(cK,&ck));
27699566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->rmap->n,&cm));
27709566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->cmap->n,&cn));
277150ce3c9cSStefano Zampini   if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","N",&cm,&cn,&ck,&_DOne,av,&alda,recvbuf,&ck,&_DZero,cv,&clda));
27729566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&av));
27739566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A,&bv));
27749566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A,&cv));
27759566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
27769566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2777faa55883SToby Isaac   PetscFunctionReturn(0);
2778faa55883SToby Isaac }
2779faa55883SToby Isaac 
2780faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C)
2781faa55883SToby Isaac {
27826718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2783faa55883SToby Isaac 
2784faa55883SToby Isaac   PetscFunctionBegin;
27856718818eSStefano Zampini   MatCheckProduct(C,3);
27865f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
27876718818eSStefano Zampini   abt = (Mat_MatTransMultDense*)C->product->data;
2788faa55883SToby Isaac   switch (abt->alg) {
2789faa55883SToby Isaac   case 1:
27909566063dSJacob Faibussowitsch     PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C));
2791faa55883SToby Isaac     break;
2792faa55883SToby Isaac   default:
27939566063dSJacob Faibussowitsch     PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C));
2794faa55883SToby Isaac     break;
2795faa55883SToby Isaac   }
2796faa55883SToby Isaac   PetscFunctionReturn(0);
2797faa55883SToby Isaac }
2798faa55883SToby Isaac 
27996718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data)
2800320f2790SHong Zhang {
28016718818eSStefano Zampini   Mat_MatMultDense *ab = (Mat_MatMultDense*)data;
2802320f2790SHong Zhang 
2803320f2790SHong Zhang   PetscFunctionBegin;
28049566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Ce));
28059566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Ae));
28069566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Be));
28079566063dSJacob Faibussowitsch   PetscCall(PetscFree(ab));
2808320f2790SHong Zhang   PetscFunctionReturn(0);
2809320f2790SHong Zhang }
2810320f2790SHong Zhang 
28115242a7b1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
2812320f2790SHong Zhang PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2813320f2790SHong Zhang {
28146718818eSStefano Zampini   Mat_MatMultDense *ab;
2815320f2790SHong Zhang 
2816320f2790SHong Zhang   PetscFunctionBegin;
28176718818eSStefano Zampini   MatCheckProduct(C,3);
28185f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing product data");
28196718818eSStefano Zampini   ab   = (Mat_MatMultDense*)C->product->data;
28209566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_Elemental(A,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Ae));
28219566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_Elemental(B,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Be));
28229566063dSJacob Faibussowitsch   PetscCall(MatMatMultNumeric_Elemental(ab->Ae,ab->Be,ab->Ce));
28239566063dSJacob Faibussowitsch   PetscCall(MatConvert(ab->Ce,MATMPIDENSE,MAT_REUSE_MATRIX,&C));
2824320f2790SHong Zhang   PetscFunctionReturn(0);
2825320f2790SHong Zhang }
2826320f2790SHong Zhang 
28276718818eSStefano Zampini static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2828320f2790SHong Zhang {
2829320f2790SHong Zhang   Mat              Ae,Be,Ce;
2830320f2790SHong Zhang   Mat_MatMultDense *ab;
2831320f2790SHong Zhang 
2832320f2790SHong Zhang   PetscFunctionBegin;
28336718818eSStefano Zampini   MatCheckProduct(C,4);
28345f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
28354222ddf1SHong Zhang   /* check local size of A and B */
2836320f2790SHong Zhang   if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend) {
283798921bdaSJacob Faibussowitsch     SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2838320f2790SHong Zhang   }
2839320f2790SHong Zhang 
28404222ddf1SHong Zhang   /* create elemental matrices Ae and Be */
28419566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &Ae));
28429566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(Ae,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N));
28439566063dSJacob Faibussowitsch   PetscCall(MatSetType(Ae,MATELEMENTAL));
28449566063dSJacob Faibussowitsch   PetscCall(MatSetUp(Ae));
28459566063dSJacob Faibussowitsch   PetscCall(MatSetOption(Ae,MAT_ROW_ORIENTED,PETSC_FALSE));
2846320f2790SHong Zhang 
28479566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &Be));
28489566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(Be,PETSC_DECIDE,PETSC_DECIDE,B->rmap->N,B->cmap->N));
28499566063dSJacob Faibussowitsch   PetscCall(MatSetType(Be,MATELEMENTAL));
28509566063dSJacob Faibussowitsch   PetscCall(MatSetUp(Be));
28519566063dSJacob Faibussowitsch   PetscCall(MatSetOption(Be,MAT_ROW_ORIENTED,PETSC_FALSE));
2852320f2790SHong Zhang 
28534222ddf1SHong Zhang   /* compute symbolic Ce = Ae*Be */
28549566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)C),&Ce));
28559566063dSJacob Faibussowitsch   PetscCall(MatMatMultSymbolic_Elemental(Ae,Be,fill,Ce));
28564222ddf1SHong Zhang 
28574222ddf1SHong Zhang   /* setup C */
28589566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C,A->rmap->n,B->cmap->n,PETSC_DECIDE,PETSC_DECIDE));
28599566063dSJacob Faibussowitsch   PetscCall(MatSetType(C,MATDENSE));
28609566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
2861320f2790SHong Zhang 
2862320f2790SHong Zhang   /* create data structure for reuse Cdense */
28639566063dSJacob Faibussowitsch   PetscCall(PetscNew(&ab));
2864320f2790SHong Zhang   ab->Ae = Ae;
2865320f2790SHong Zhang   ab->Be = Be;
2866320f2790SHong Zhang   ab->Ce = Ce;
28676718818eSStefano Zampini 
28686718818eSStefano Zampini   C->product->data    = ab;
28696718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense;
28704222ddf1SHong Zhang   C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense;
2871320f2790SHong Zhang   PetscFunctionReturn(0);
2872320f2790SHong Zhang }
28734222ddf1SHong Zhang #endif
28744222ddf1SHong Zhang /* ----------------------------------------------- */
28754222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
28764222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C)
2877320f2790SHong Zhang {
2878320f2790SHong Zhang   PetscFunctionBegin;
28794222ddf1SHong Zhang   C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense;
28804222ddf1SHong Zhang   C->ops->productsymbolic = MatProductSymbolic_AB;
2881320f2790SHong Zhang   PetscFunctionReturn(0);
2882320f2790SHong Zhang }
28835242a7b1SHong Zhang #endif
288486aefd0dSHong Zhang 
28854222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C)
28864222ddf1SHong Zhang {
28874222ddf1SHong Zhang   Mat_Product *product = C->product;
28884222ddf1SHong Zhang   Mat         A = product->A,B=product->B;
28894222ddf1SHong Zhang 
28904222ddf1SHong Zhang   PetscFunctionBegin;
28914222ddf1SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend)
289298921bdaSJacob Faibussowitsch     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
28936718818eSStefano Zampini   C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense;
28946718818eSStefano Zampini   C->ops->productsymbolic = MatProductSymbolic_AtB;
28954222ddf1SHong Zhang   PetscFunctionReturn(0);
28964222ddf1SHong Zhang }
28974222ddf1SHong Zhang 
28984222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C)
28994222ddf1SHong Zhang {
29004222ddf1SHong Zhang   Mat_Product    *product = C->product;
29014222ddf1SHong Zhang   const char     *algTypes[2] = {"allgatherv","cyclic"};
29024222ddf1SHong Zhang   PetscInt       alg,nalg = 2;
29034222ddf1SHong Zhang   PetscBool      flg = PETSC_FALSE;
29044222ddf1SHong Zhang 
29054222ddf1SHong Zhang   PetscFunctionBegin;
29064222ddf1SHong Zhang   /* Set default algorithm */
29074222ddf1SHong Zhang   alg = 0; /* default is allgatherv */
29089566063dSJacob Faibussowitsch   PetscCall(PetscStrcmp(product->alg,"default",&flg));
29094222ddf1SHong Zhang   if (flg) {
29109566063dSJacob Faibussowitsch     PetscCall(MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]));
29114222ddf1SHong Zhang   }
29124222ddf1SHong Zhang 
29134222ddf1SHong Zhang   /* Get runtime option */
29144222ddf1SHong Zhang   if (product->api_user) {
2915d0609cedSBarry Smith     PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatMatTransposeMult","Mat");
29169566063dSJacob Faibussowitsch     PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via","Algorithmic approach","MatMatTransposeMult",algTypes,nalg,algTypes[alg],&alg,&flg));
2917d0609cedSBarry Smith     PetscOptionsEnd();
29184222ddf1SHong Zhang   } else {
2919d0609cedSBarry Smith     PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatProduct_ABt","Mat");
29209566063dSJacob Faibussowitsch     PetscCall(PetscOptionsEList("-mat_product_algorithm","Algorithmic approach","MatProduct_ABt",algTypes,nalg,algTypes[alg],&alg,&flg));
2921d0609cedSBarry Smith     PetscOptionsEnd();
29224222ddf1SHong Zhang   }
29234222ddf1SHong Zhang   if (flg) {
29249566063dSJacob Faibussowitsch     PetscCall(MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]));
29254222ddf1SHong Zhang   }
29264222ddf1SHong Zhang 
29274222ddf1SHong Zhang   C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense;
29284222ddf1SHong Zhang   C->ops->productsymbolic          = MatProductSymbolic_ABt;
29294222ddf1SHong Zhang   PetscFunctionReturn(0);
29304222ddf1SHong Zhang }
29314222ddf1SHong Zhang 
29324222ddf1SHong Zhang PETSC_INTERN PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C)
29334222ddf1SHong Zhang {
29344222ddf1SHong Zhang   Mat_Product    *product = C->product;
29354222ddf1SHong Zhang 
29364222ddf1SHong Zhang   PetscFunctionBegin;
29374222ddf1SHong Zhang   switch (product->type) {
29384222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
29394222ddf1SHong Zhang   case MATPRODUCT_AB:
29409566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_MPIDense_AB(C));
29414222ddf1SHong Zhang     break;
29424222ddf1SHong Zhang #endif
29434222ddf1SHong Zhang   case MATPRODUCT_AtB:
29449566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_MPIDense_AtB(C));
29454222ddf1SHong Zhang     break;
29464222ddf1SHong Zhang   case MATPRODUCT_ABt:
29479566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_MPIDense_ABt(C));
29484222ddf1SHong Zhang     break;
29496718818eSStefano Zampini   default:
29506718818eSStefano Zampini     break;
29514222ddf1SHong Zhang   }
29524222ddf1SHong Zhang   PetscFunctionReturn(0);
29534222ddf1SHong Zhang }
2954