xref: /petsc/src/mat/impls/dense/mpi/mpidense.c (revision 320f2790d574cc2255cb4d463df0df828ded99b1)
1be1d678aSKris Buschelman 
2ed3cc1f0SBarry Smith /*
3ed3cc1f0SBarry Smith    Basic functions for basic parallel dense matrices.
4ed3cc1f0SBarry Smith */
5ed3cc1f0SBarry Smith 
604fea9ffSBarry Smith 
7c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h>    /*I   "petscmat.h"  I*/
88949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h>
9baa3c1c6SHong Zhang #include <petscblaslapack.h>
108965ea79SLois Curfman McInnes 
11ba8c8a56SBarry Smith #undef __FUNCT__
12ab92ecdeSBarry Smith #define __FUNCT__ "MatDenseGetLocalMatrix"
13ab92ecdeSBarry Smith /*@
14ab92ecdeSBarry Smith 
15ab92ecdeSBarry Smith       MatDenseGetLocalMatrix - For a MATMPIDENSE or MATSEQDENSE matrix returns the sequential
16ab92ecdeSBarry Smith               matrix that represents the operator. For sequential matrices it returns itself.
17ab92ecdeSBarry Smith 
18ab92ecdeSBarry Smith     Input Parameter:
19ab92ecdeSBarry Smith .      A - the Seq or MPI dense matrix
20ab92ecdeSBarry Smith 
21ab92ecdeSBarry Smith     Output Parameter:
22ab92ecdeSBarry Smith .      B - the inner matrix
23ab92ecdeSBarry Smith 
248e6c10adSSatish Balay     Level: intermediate
258e6c10adSSatish Balay 
26ab92ecdeSBarry Smith @*/
27ab92ecdeSBarry Smith PetscErrorCode MatDenseGetLocalMatrix(Mat A,Mat *B)
28ab92ecdeSBarry Smith {
29ab92ecdeSBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
30ab92ecdeSBarry Smith   PetscErrorCode ierr;
31ace3abfcSBarry Smith   PetscBool      flg;
32ab92ecdeSBarry Smith 
33ab92ecdeSBarry Smith   PetscFunctionBegin;
34251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIDENSE,&flg);CHKERRQ(ierr);
352205254eSKarl Rupp   if (flg) *B = mat->A;
362205254eSKarl Rupp   else *B = A;
37ab92ecdeSBarry Smith   PetscFunctionReturn(0);
38ab92ecdeSBarry Smith }
39ab92ecdeSBarry Smith 
40ab92ecdeSBarry Smith #undef __FUNCT__
41ba8c8a56SBarry Smith #define __FUNCT__ "MatGetRow_MPIDense"
42ba8c8a56SBarry Smith PetscErrorCode MatGetRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
43ba8c8a56SBarry Smith {
44ba8c8a56SBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
45ba8c8a56SBarry Smith   PetscErrorCode ierr;
46d0f46423SBarry Smith   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
47ba8c8a56SBarry Smith 
48ba8c8a56SBarry Smith   PetscFunctionBegin;
49e7e72b3dSBarry Smith   if (row < rstart || row >= rend) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
50ba8c8a56SBarry Smith   lrow = row - rstart;
51ba8c8a56SBarry Smith   ierr = MatGetRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v);CHKERRQ(ierr);
52ba8c8a56SBarry Smith   PetscFunctionReturn(0);
53ba8c8a56SBarry Smith }
54ba8c8a56SBarry Smith 
55ba8c8a56SBarry Smith #undef __FUNCT__
56ba8c8a56SBarry Smith #define __FUNCT__ "MatRestoreRow_MPIDense"
57ba8c8a56SBarry Smith PetscErrorCode MatRestoreRow_MPIDense(Mat mat,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
58ba8c8a56SBarry Smith {
59ba8c8a56SBarry Smith   PetscErrorCode ierr;
60ba8c8a56SBarry Smith 
61ba8c8a56SBarry Smith   PetscFunctionBegin;
62ba8c8a56SBarry Smith   if (idx) {ierr = PetscFree(*idx);CHKERRQ(ierr);}
63ba8c8a56SBarry Smith   if (v) {ierr = PetscFree(*v);CHKERRQ(ierr);}
64ba8c8a56SBarry Smith   PetscFunctionReturn(0);
65ba8c8a56SBarry Smith }
66ba8c8a56SBarry Smith 
674a2ae208SSatish Balay #undef __FUNCT__
684a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonalBlock_MPIDense"
6911bd1e4dSLisandro Dalcin PetscErrorCode  MatGetDiagonalBlock_MPIDense(Mat A,Mat *a)
700de54da6SSatish Balay {
710de54da6SSatish Balay   Mat_MPIDense   *mdn = (Mat_MPIDense*)A->data;
726849ba73SBarry Smith   PetscErrorCode ierr;
73d0f46423SBarry Smith   PetscInt       m = A->rmap->n,rstart = A->rmap->rstart;
7487828ca2SBarry Smith   PetscScalar    *array;
750de54da6SSatish Balay   MPI_Comm       comm;
7611bd1e4dSLisandro Dalcin   Mat            B;
770de54da6SSatish Balay 
780de54da6SSatish Balay   PetscFunctionBegin;
79e32f2f54SBarry Smith   if (A->rmap->N != A->cmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only square matrices supported.");
800de54da6SSatish Balay 
8111bd1e4dSLisandro Dalcin   ierr = PetscObjectQuery((PetscObject)A,"DiagonalBlock",(PetscObject*)&B);CHKERRQ(ierr);
8211bd1e4dSLisandro Dalcin   if (!B) {
830de54da6SSatish Balay     ierr = PetscObjectGetComm((PetscObject)(mdn->A),&comm);CHKERRQ(ierr);
8411bd1e4dSLisandro Dalcin     ierr = MatCreate(comm,&B);CHKERRQ(ierr);
8511bd1e4dSLisandro Dalcin     ierr = MatSetSizes(B,m,m,m,m);CHKERRQ(ierr);
8611bd1e4dSLisandro Dalcin     ierr = MatSetType(B,((PetscObject)mdn->A)->type_name);CHKERRQ(ierr);
878c778c55SBarry Smith     ierr = MatDenseGetArray(mdn->A,&array);CHKERRQ(ierr);
8811bd1e4dSLisandro Dalcin     ierr = MatSeqDenseSetPreallocation(B,array+m*rstart);CHKERRQ(ierr);
898c778c55SBarry Smith     ierr = MatDenseRestoreArray(mdn->A,&array);CHKERRQ(ierr);
9011bd1e4dSLisandro Dalcin     ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
9111bd1e4dSLisandro Dalcin     ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
9211bd1e4dSLisandro Dalcin     ierr = PetscObjectCompose((PetscObject)A,"DiagonalBlock",(PetscObject)B);CHKERRQ(ierr);
9311bd1e4dSLisandro Dalcin     *a   = B;
9411bd1e4dSLisandro Dalcin     ierr = MatDestroy(&B);CHKERRQ(ierr);
952205254eSKarl Rupp   } else *a = B;
960de54da6SSatish Balay   PetscFunctionReturn(0);
970de54da6SSatish Balay }
980de54da6SSatish Balay 
994a2ae208SSatish Balay #undef __FUNCT__
1004a2ae208SSatish Balay #define __FUNCT__ "MatSetValues_MPIDense"
10113f74950SBarry Smith PetscErrorCode MatSetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],const PetscScalar v[],InsertMode addv)
1028965ea79SLois Curfman McInnes {
10339b7565bSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)mat->data;
104dfbe8321SBarry Smith   PetscErrorCode ierr;
105d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
106ace3abfcSBarry Smith   PetscBool      roworiented = A->roworiented;
1078965ea79SLois Curfman McInnes 
1083a40ed3dSBarry Smith   PetscFunctionBegin;
1098965ea79SLois Curfman McInnes   for (i=0; i<m; i++) {
1105ef9f2a5SBarry Smith     if (idxm[i] < 0) continue;
111e32f2f54SBarry Smith     if (idxm[i] >= mat->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
1128965ea79SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
1138965ea79SLois Curfman McInnes       row = idxm[i] - rstart;
11439b7565bSBarry Smith       if (roworiented) {
11539b7565bSBarry Smith         ierr = MatSetValues(A->A,1,&row,n,idxn,v+i*n,addv);CHKERRQ(ierr);
1163a40ed3dSBarry Smith       } else {
1178965ea79SLois Curfman McInnes         for (j=0; j<n; j++) {
1185ef9f2a5SBarry Smith           if (idxn[j] < 0) continue;
119e32f2f54SBarry Smith           if (idxn[j] >= mat->cmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
12039b7565bSBarry Smith           ierr = MatSetValues(A->A,1,&row,1,&idxn[j],v+i+j*m,addv);CHKERRQ(ierr);
12139b7565bSBarry Smith         }
1228965ea79SLois Curfman McInnes       }
1232205254eSKarl Rupp     } else if (!A->donotstash) {
1245080c13bSMatthew G Knepley       mat->assembled = PETSC_FALSE;
12539b7565bSBarry Smith       if (roworiented) {
126b400d20cSBarry Smith         ierr = MatStashValuesRow_Private(&mat->stash,idxm[i],n,idxn,v+i*n,PETSC_FALSE);CHKERRQ(ierr);
127d36fbae8SSatish Balay       } else {
128b400d20cSBarry Smith         ierr = MatStashValuesCol_Private(&mat->stash,idxm[i],n,idxn,v+i,m,PETSC_FALSE);CHKERRQ(ierr);
12939b7565bSBarry Smith       }
130b49de8d1SLois Curfman McInnes     }
131b49de8d1SLois Curfman McInnes   }
1323a40ed3dSBarry Smith   PetscFunctionReturn(0);
133b49de8d1SLois Curfman McInnes }
134b49de8d1SLois Curfman McInnes 
1354a2ae208SSatish Balay #undef __FUNCT__
1364a2ae208SSatish Balay #define __FUNCT__ "MatGetValues_MPIDense"
13713f74950SBarry Smith PetscErrorCode MatGetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],PetscScalar v[])
138b49de8d1SLois Curfman McInnes {
139b49de8d1SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
140dfbe8321SBarry Smith   PetscErrorCode ierr;
141d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
142b49de8d1SLois Curfman McInnes 
1433a40ed3dSBarry Smith   PetscFunctionBegin;
144b49de8d1SLois Curfman McInnes   for (i=0; i<m; i++) {
145e32f2f54SBarry Smith     if (idxm[i] < 0) continue; /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative row"); */
146e32f2f54SBarry Smith     if (idxm[i] >= mat->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
147b49de8d1SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
148b49de8d1SLois Curfman McInnes       row = idxm[i] - rstart;
149b49de8d1SLois Curfman McInnes       for (j=0; j<n; j++) {
150e32f2f54SBarry Smith         if (idxn[j] < 0) continue; /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative column"); */
151e7e72b3dSBarry Smith         if (idxn[j] >= mat->cmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
152b49de8d1SLois Curfman McInnes         ierr = MatGetValues(mdn->A,1,&row,1,&idxn[j],v+i*n+j);CHKERRQ(ierr);
153b49de8d1SLois Curfman McInnes       }
154e7e72b3dSBarry Smith     } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only local values currently supported");
1558965ea79SLois Curfman McInnes   }
1563a40ed3dSBarry Smith   PetscFunctionReturn(0);
1578965ea79SLois Curfman McInnes }
1588965ea79SLois Curfman McInnes 
1594a2ae208SSatish Balay #undef __FUNCT__
1608c778c55SBarry Smith #define __FUNCT__ "MatDenseGetArray_MPIDense"
1618c778c55SBarry Smith PetscErrorCode MatDenseGetArray_MPIDense(Mat A,PetscScalar *array[])
162ff14e315SSatish Balay {
163ff14e315SSatish Balay   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
164dfbe8321SBarry Smith   PetscErrorCode ierr;
165ff14e315SSatish Balay 
1663a40ed3dSBarry Smith   PetscFunctionBegin;
1678c778c55SBarry Smith   ierr = MatDenseGetArray(a->A,array);CHKERRQ(ierr);
1683a40ed3dSBarry Smith   PetscFunctionReturn(0);
169ff14e315SSatish Balay }
170ff14e315SSatish Balay 
1714a2ae208SSatish Balay #undef __FUNCT__
1724a2ae208SSatish Balay #define __FUNCT__ "MatGetSubMatrix_MPIDense"
1734aa3045dSJed Brown static PetscErrorCode MatGetSubMatrix_MPIDense(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B)
174ca3fa75bSLois Curfman McInnes {
175ca3fa75bSLois Curfman McInnes   Mat_MPIDense   *mat  = (Mat_MPIDense*)A->data,*newmatd;
176ca3fa75bSLois Curfman McInnes   Mat_SeqDense   *lmat = (Mat_SeqDense*)mat->A->data;
1776849ba73SBarry Smith   PetscErrorCode ierr;
1784aa3045dSJed Brown   PetscInt       i,j,rstart,rend,nrows,ncols,Ncols,nlrows,nlcols;
1795d0c19d7SBarry Smith   const PetscInt *irow,*icol;
18087828ca2SBarry Smith   PetscScalar    *av,*bv,*v = lmat->v;
181ca3fa75bSLois Curfman McInnes   Mat            newmat;
1824aa3045dSJed Brown   IS             iscol_local;
183ca3fa75bSLois Curfman McInnes 
184ca3fa75bSLois Curfman McInnes   PetscFunctionBegin;
1854aa3045dSJed Brown   ierr = ISAllGather(iscol,&iscol_local);CHKERRQ(ierr);
186ca3fa75bSLois Curfman McInnes   ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr);
1874aa3045dSJed Brown   ierr = ISGetIndices(iscol_local,&icol);CHKERRQ(ierr);
188b9b97703SBarry Smith   ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr);
189b9b97703SBarry Smith   ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr);
1904aa3045dSJed Brown   ierr = ISGetSize(iscol,&Ncols);CHKERRQ(ierr); /* global number of columns, size of iscol_local */
191ca3fa75bSLois Curfman McInnes 
192ca3fa75bSLois Curfman McInnes   /* No parallel redistribution currently supported! Should really check each index set
1937eba5e9cSLois Curfman McInnes      to comfirm that it is OK.  ... Currently supports only submatrix same partitioning as
1947eba5e9cSLois Curfman McInnes      original matrix! */
195ca3fa75bSLois Curfman McInnes 
196ca3fa75bSLois Curfman McInnes   ierr = MatGetLocalSize(A,&nlrows,&nlcols);CHKERRQ(ierr);
1977eba5e9cSLois Curfman McInnes   ierr = MatGetOwnershipRange(A,&rstart,&rend);CHKERRQ(ierr);
198ca3fa75bSLois Curfman McInnes 
199ca3fa75bSLois Curfman McInnes   /* Check submatrix call */
200ca3fa75bSLois Curfman McInnes   if (scall == MAT_REUSE_MATRIX) {
201e32f2f54SBarry Smith     /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */
2027eba5e9cSLois Curfman McInnes     /* Really need to test rows and column sizes! */
203ca3fa75bSLois Curfman McInnes     newmat = *B;
204ca3fa75bSLois Curfman McInnes   } else {
205ca3fa75bSLois Curfman McInnes     /* Create and fill new matrix */
206ce94432eSBarry Smith     ierr = MatCreate(PetscObjectComm((PetscObject)A),&newmat);CHKERRQ(ierr);
2074aa3045dSJed Brown     ierr = MatSetSizes(newmat,nrows,ncols,PETSC_DECIDE,Ncols);CHKERRQ(ierr);
2087adad957SLisandro Dalcin     ierr = MatSetType(newmat,((PetscObject)A)->type_name);CHKERRQ(ierr);
2090298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(newmat,NULL);CHKERRQ(ierr);
210ca3fa75bSLois Curfman McInnes   }
211ca3fa75bSLois Curfman McInnes 
212ca3fa75bSLois Curfman McInnes   /* Now extract the data pointers and do the copy, column at a time */
213ca3fa75bSLois Curfman McInnes   newmatd = (Mat_MPIDense*)newmat->data;
214ca3fa75bSLois Curfman McInnes   bv      = ((Mat_SeqDense*)newmatd->A->data)->v;
215ca3fa75bSLois Curfman McInnes 
2164aa3045dSJed Brown   for (i=0; i<Ncols; i++) {
21725a33276SHong Zhang     av = v + ((Mat_SeqDense*)mat->A->data)->lda*icol[i];
218ca3fa75bSLois Curfman McInnes     for (j=0; j<nrows; j++) {
2197eba5e9cSLois Curfman McInnes       *bv++ = av[irow[j] - rstart];
220ca3fa75bSLois Curfman McInnes     }
221ca3fa75bSLois Curfman McInnes   }
222ca3fa75bSLois Curfman McInnes 
223ca3fa75bSLois Curfman McInnes   /* Assemble the matrices so that the correct flags are set */
224ca3fa75bSLois Curfman McInnes   ierr = MatAssemblyBegin(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
225ca3fa75bSLois Curfman McInnes   ierr = MatAssemblyEnd(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
226ca3fa75bSLois Curfman McInnes 
227ca3fa75bSLois Curfman McInnes   /* Free work space */
228ca3fa75bSLois Curfman McInnes   ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr);
2295bdf786aSShri Abhyankar   ierr = ISRestoreIndices(iscol_local,&icol);CHKERRQ(ierr);
23032bb1f2dSLisandro Dalcin   ierr = ISDestroy(&iscol_local);CHKERRQ(ierr);
231ca3fa75bSLois Curfman McInnes   *B   = newmat;
232ca3fa75bSLois Curfman McInnes   PetscFunctionReturn(0);
233ca3fa75bSLois Curfman McInnes }
234ca3fa75bSLois Curfman McInnes 
2354a2ae208SSatish Balay #undef __FUNCT__
2368c778c55SBarry Smith #define __FUNCT__ "MatDenseRestoreArray_MPIDense"
2378c778c55SBarry Smith PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A,PetscScalar *array[])
238ff14e315SSatish Balay {
23973a71a0fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
24073a71a0fSBarry Smith   PetscErrorCode ierr;
24173a71a0fSBarry Smith 
2423a40ed3dSBarry Smith   PetscFunctionBegin;
2438c778c55SBarry Smith   ierr = MatDenseRestoreArray(a->A,array);CHKERRQ(ierr);
2443a40ed3dSBarry Smith   PetscFunctionReturn(0);
245ff14e315SSatish Balay }
246ff14e315SSatish Balay 
2474a2ae208SSatish Balay #undef __FUNCT__
2484a2ae208SSatish Balay #define __FUNCT__ "MatAssemblyBegin_MPIDense"
249dfbe8321SBarry Smith PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat,MatAssemblyType mode)
2508965ea79SLois Curfman McInnes {
25139ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
252ce94432eSBarry Smith   MPI_Comm       comm;
253dfbe8321SBarry Smith   PetscErrorCode ierr;
25413f74950SBarry Smith   PetscInt       nstash,reallocs;
2558965ea79SLois Curfman McInnes   InsertMode     addv;
2568965ea79SLois Curfman McInnes 
2573a40ed3dSBarry Smith   PetscFunctionBegin;
258ce94432eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)mat,&comm);CHKERRQ(ierr);
2598965ea79SLois Curfman McInnes   /* make sure all processors are either in INSERTMODE or ADDMODE */
260c3aae356SJed Brown   ierr = MPI_Allreduce((PetscEnum*)&mat->insertmode,(PetscEnum*)&addv,1,MPIU_ENUM,MPI_BOR,comm);CHKERRQ(ierr);
261ce94432eSBarry Smith   if (addv == (ADD_VALUES|INSERT_VALUES)) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ARG_WRONGSTATE,"Cannot mix adds/inserts on different procs");
262e0fa3b82SLois Curfman McInnes   mat->insertmode = addv; /* in case this processor had no cache */
2638965ea79SLois Curfman McInnes 
264d0f46423SBarry Smith   ierr = MatStashScatterBegin_Private(mat,&mat->stash,mat->rmap->range);CHKERRQ(ierr);
2658798bf22SSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
266ae15b995SBarry Smith   ierr = PetscInfo2(mdn->A,"Stash has %D entries, uses %D mallocs.\n",nstash,reallocs);CHKERRQ(ierr);
2673a40ed3dSBarry Smith   PetscFunctionReturn(0);
2688965ea79SLois Curfman McInnes }
2698965ea79SLois Curfman McInnes 
2704a2ae208SSatish Balay #undef __FUNCT__
2714a2ae208SSatish Balay #define __FUNCT__ "MatAssemblyEnd_MPIDense"
272dfbe8321SBarry Smith PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat,MatAssemblyType mode)
2738965ea79SLois Curfman McInnes {
27439ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn=(Mat_MPIDense*)mat->data;
2756849ba73SBarry Smith   PetscErrorCode ierr;
27613f74950SBarry Smith   PetscInt       i,*row,*col,flg,j,rstart,ncols;
27713f74950SBarry Smith   PetscMPIInt    n;
27887828ca2SBarry Smith   PetscScalar    *val;
2798965ea79SLois Curfman McInnes 
2803a40ed3dSBarry Smith   PetscFunctionBegin;
2818965ea79SLois Curfman McInnes   /*  wait on receives */
2827ef1d9bdSSatish Balay   while (1) {
2838798bf22SSatish Balay     ierr = MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
2847ef1d9bdSSatish Balay     if (!flg) break;
2858965ea79SLois Curfman McInnes 
2867ef1d9bdSSatish Balay     for (i=0; i<n;) {
2877ef1d9bdSSatish Balay       /* Now identify the consecutive vals belonging to the same row */
2882205254eSKarl Rupp       for (j=i,rstart=row[j]; j<n; j++) {
2892205254eSKarl Rupp         if (row[j] != rstart) break;
2902205254eSKarl Rupp       }
2917ef1d9bdSSatish Balay       if (j < n) ncols = j-i;
2927ef1d9bdSSatish Balay       else       ncols = n-i;
2937ef1d9bdSSatish Balay       /* Now assemble all these values with a single function call */
2944b4eb8d3SJed Brown       ierr = MatSetValues_MPIDense(mat,1,row+i,ncols,col+i,val+i,mat->insertmode);CHKERRQ(ierr);
2957ef1d9bdSSatish Balay       i    = j;
2968965ea79SLois Curfman McInnes     }
2977ef1d9bdSSatish Balay   }
2988798bf22SSatish Balay   ierr = MatStashScatterEnd_Private(&mat->stash);CHKERRQ(ierr);
2998965ea79SLois Curfman McInnes 
30039ddd567SLois Curfman McInnes   ierr = MatAssemblyBegin(mdn->A,mode);CHKERRQ(ierr);
30139ddd567SLois Curfman McInnes   ierr = MatAssemblyEnd(mdn->A,mode);CHKERRQ(ierr);
3028965ea79SLois Curfman McInnes 
3036d4a8577SBarry Smith   if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) {
30439ddd567SLois Curfman McInnes     ierr = MatSetUpMultiply_MPIDense(mat);CHKERRQ(ierr);
3058965ea79SLois Curfman McInnes   }
3063a40ed3dSBarry Smith   PetscFunctionReturn(0);
3078965ea79SLois Curfman McInnes }
3088965ea79SLois Curfman McInnes 
3094a2ae208SSatish Balay #undef __FUNCT__
3104a2ae208SSatish Balay #define __FUNCT__ "MatZeroEntries_MPIDense"
311dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_MPIDense(Mat A)
3128965ea79SLois Curfman McInnes {
313dfbe8321SBarry Smith   PetscErrorCode ierr;
31439ddd567SLois Curfman McInnes   Mat_MPIDense   *l = (Mat_MPIDense*)A->data;
3153a40ed3dSBarry Smith 
3163a40ed3dSBarry Smith   PetscFunctionBegin;
3173a40ed3dSBarry Smith   ierr = MatZeroEntries(l->A);CHKERRQ(ierr);
3183a40ed3dSBarry Smith   PetscFunctionReturn(0);
3198965ea79SLois Curfman McInnes }
3208965ea79SLois Curfman McInnes 
3218965ea79SLois Curfman McInnes /* the code does not do the diagonal entries correctly unless the
3228965ea79SLois Curfman McInnes    matrix is square and the column and row owerships are identical.
3238965ea79SLois Curfman McInnes    This is a BUG. The only way to fix it seems to be to access
3243501a2bdSLois Curfman McInnes    mdn->A and mdn->B directly and not through the MatZeroRows()
3258965ea79SLois Curfman McInnes    routine.
3268965ea79SLois Curfman McInnes */
3274a2ae208SSatish Balay #undef __FUNCT__
3284a2ae208SSatish Balay #define __FUNCT__ "MatZeroRows_MPIDense"
3292b40b63fSBarry Smith PetscErrorCode MatZeroRows_MPIDense(Mat A,PetscInt N,const PetscInt rows[],PetscScalar diag,Vec x,Vec b)
3308965ea79SLois Curfman McInnes {
33139ddd567SLois Curfman McInnes   Mat_MPIDense      *l = (Mat_MPIDense*)A->data;
3326849ba73SBarry Smith   PetscErrorCode    ierr;
333d0f46423SBarry Smith   PetscInt          i,*owners = A->rmap->range;
33476ec1555SBarry Smith   PetscInt          *sizes,j,idx,nsends;
33513f74950SBarry Smith   PetscInt          nmax,*svalues,*starts,*owner,nrecvs;
3367adad957SLisandro Dalcin   PetscInt          *rvalues,tag = ((PetscObject)A)->tag,count,base,slen,*source;
33713f74950SBarry Smith   PetscInt          *lens,*lrows,*values;
33813f74950SBarry Smith   PetscMPIInt       n,imdex,rank = l->rank,size = l->size;
339ce94432eSBarry Smith   MPI_Comm          comm;
3408965ea79SLois Curfman McInnes   MPI_Request       *send_waits,*recv_waits;
3418965ea79SLois Curfman McInnes   MPI_Status        recv_status,*send_status;
342ace3abfcSBarry Smith   PetscBool         found;
34397b48c8fSBarry Smith   const PetscScalar *xx;
34497b48c8fSBarry Smith   PetscScalar       *bb;
3458965ea79SLois Curfman McInnes 
3463a40ed3dSBarry Smith   PetscFunctionBegin;
347ce94432eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
348ce94432eSBarry Smith   if (A->rmap->N != A->cmap->N) SETERRQ(comm,PETSC_ERR_SUP,"Only handles square matrices");
349b9679d65SBarry Smith   if (A->rmap->n != A->cmap->n) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only handles matrices with identical column and row ownership");
3508965ea79SLois Curfman McInnes   /*  first count number of contributors to each processor */
351f628708eSJed Brown   ierr = PetscCalloc1(2*size,&sizes);CHKERRQ(ierr);
352037dbc42SBarry Smith   ierr = PetscMalloc1(N+1,&owner);CHKERRQ(ierr);  /* see note*/
3538965ea79SLois Curfman McInnes   for (i=0; i<N; i++) {
3548965ea79SLois Curfman McInnes     idx   = rows[i];
35535d8aa7fSBarry Smith     found = PETSC_FALSE;
3568965ea79SLois Curfman McInnes     for (j=0; j<size; j++) {
3578965ea79SLois Curfman McInnes       if (idx >= owners[j] && idx < owners[j+1]) {
35876ec1555SBarry Smith         sizes[2*j]++; sizes[2*j+1] = 1; owner[i] = j; found = PETSC_TRUE; break;
3598965ea79SLois Curfman McInnes       }
3608965ea79SLois Curfman McInnes     }
361e32f2f54SBarry Smith     if (!found) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Index out of range");
3628965ea79SLois Curfman McInnes   }
3632205254eSKarl Rupp   nsends = 0;
36476ec1555SBarry Smith   for (i=0; i<size; i++) nsends += sizes[2*i+1];
3658965ea79SLois Curfman McInnes 
3668965ea79SLois Curfman McInnes   /* inform other processors of number of messages and max length*/
36776ec1555SBarry Smith   ierr = PetscMaxSum(comm,sizes,&nmax,&nrecvs);CHKERRQ(ierr);
3688965ea79SLois Curfman McInnes 
3698965ea79SLois Curfman McInnes   /* post receives:   */
370785e854fSJed Brown   ierr = PetscMalloc1((nrecvs+1)*(nmax+1),&rvalues);CHKERRQ(ierr);
371854ce69bSBarry Smith   ierr = PetscMalloc1(nrecvs+1,&recv_waits);CHKERRQ(ierr);
3728965ea79SLois Curfman McInnes   for (i=0; i<nrecvs; i++) {
37313f74950SBarry Smith     ierr = MPI_Irecv(rvalues+nmax*i,nmax,MPIU_INT,MPI_ANY_SOURCE,tag,comm,recv_waits+i);CHKERRQ(ierr);
3748965ea79SLois Curfman McInnes   }
3758965ea79SLois Curfman McInnes 
3768965ea79SLois Curfman McInnes   /* do sends:
3778965ea79SLois Curfman McInnes       1) starts[i] gives the starting index in svalues for stuff going to
3788965ea79SLois Curfman McInnes          the ith processor
3798965ea79SLois Curfman McInnes   */
380854ce69bSBarry Smith   ierr = PetscMalloc1(N+1,&svalues);CHKERRQ(ierr);
381854ce69bSBarry Smith   ierr = PetscMalloc1(nsends+1,&send_waits);CHKERRQ(ierr);
382854ce69bSBarry Smith   ierr = PetscMalloc1(size+1,&starts);CHKERRQ(ierr);
3838965ea79SLois Curfman McInnes 
3848965ea79SLois Curfman McInnes   starts[0] = 0;
38576ec1555SBarry Smith   for (i=1; i<size; i++) starts[i] = starts[i-1] + sizes[2*i-2];
3862205254eSKarl Rupp   for (i=0; i<N; i++) svalues[starts[owner[i]]++] = rows[i];
3872205254eSKarl Rupp 
3882205254eSKarl Rupp   starts[0] = 0;
38976ec1555SBarry Smith   for (i=1; i<size+1; i++) starts[i] = starts[i-1] + sizes[2*i-2];
3908965ea79SLois Curfman McInnes   count = 0;
3918965ea79SLois Curfman McInnes   for (i=0; i<size; i++) {
39276ec1555SBarry Smith     if (sizes[2*i+1]) {
39376ec1555SBarry Smith       ierr = MPI_Isend(svalues+starts[i],sizes[2*i],MPIU_INT,i,tag,comm,send_waits+count++);CHKERRQ(ierr);
3948965ea79SLois Curfman McInnes     }
3958965ea79SLois Curfman McInnes   }
396606d414cSSatish Balay   ierr = PetscFree(starts);CHKERRQ(ierr);
3978965ea79SLois Curfman McInnes 
3988965ea79SLois Curfman McInnes   base = owners[rank];
3998965ea79SLois Curfman McInnes 
4008965ea79SLois Curfman McInnes   /*  wait on receives */
401dcca6d9dSJed Brown   ierr  = PetscMalloc2(nrecvs,&lens,nrecvs,&source);CHKERRQ(ierr);
40274ed9c26SBarry Smith   count = nrecvs;
40374ed9c26SBarry Smith   slen  = 0;
4048965ea79SLois Curfman McInnes   while (count) {
405ca161407SBarry Smith     ierr = MPI_Waitany(nrecvs,recv_waits,&imdex,&recv_status);CHKERRQ(ierr);
4068965ea79SLois Curfman McInnes     /* unpack receives into our local space */
40713f74950SBarry Smith     ierr = MPI_Get_count(&recv_status,MPIU_INT,&n);CHKERRQ(ierr);
4082205254eSKarl Rupp 
4098965ea79SLois Curfman McInnes     source[imdex] = recv_status.MPI_SOURCE;
4108965ea79SLois Curfman McInnes     lens[imdex]   = n;
4118965ea79SLois Curfman McInnes     slen += n;
4128965ea79SLois Curfman McInnes     count--;
4138965ea79SLois Curfman McInnes   }
414606d414cSSatish Balay   ierr = PetscFree(recv_waits);CHKERRQ(ierr);
4158965ea79SLois Curfman McInnes 
4168965ea79SLois Curfman McInnes   /* move the data into the send scatter */
417854ce69bSBarry Smith   ierr  = PetscMalloc1(slen+1,&lrows);CHKERRQ(ierr);
4188965ea79SLois Curfman McInnes   count = 0;
4198965ea79SLois Curfman McInnes   for (i=0; i<nrecvs; i++) {
4208965ea79SLois Curfman McInnes     values = rvalues + i*nmax;
4218965ea79SLois Curfman McInnes     for (j=0; j<lens[i]; j++) {
4228965ea79SLois Curfman McInnes       lrows[count++] = values[j] - base;
4238965ea79SLois Curfman McInnes     }
4248965ea79SLois Curfman McInnes   }
425606d414cSSatish Balay   ierr = PetscFree(rvalues);CHKERRQ(ierr);
42674ed9c26SBarry Smith   ierr = PetscFree2(lens,source);CHKERRQ(ierr);
427606d414cSSatish Balay   ierr = PetscFree(owner);CHKERRQ(ierr);
42876ec1555SBarry Smith   ierr = PetscFree(sizes);CHKERRQ(ierr);
4298965ea79SLois Curfman McInnes 
43097b48c8fSBarry Smith   /* fix right hand side if needed */
43197b48c8fSBarry Smith   if (x && b) {
43297b48c8fSBarry Smith     ierr = VecGetArrayRead(x,&xx);CHKERRQ(ierr);
43397b48c8fSBarry Smith     ierr = VecGetArray(b,&bb);CHKERRQ(ierr);
43497b48c8fSBarry Smith     for (i=0; i<slen; i++) {
43597b48c8fSBarry Smith       bb[lrows[i]] = diag*xx[lrows[i]];
43697b48c8fSBarry Smith     }
43797b48c8fSBarry Smith     ierr = VecRestoreArrayRead(x,&xx);CHKERRQ(ierr);
43897b48c8fSBarry Smith     ierr = VecRestoreArray(b,&bb);CHKERRQ(ierr);
43997b48c8fSBarry Smith   }
44097b48c8fSBarry Smith 
4418965ea79SLois Curfman McInnes   /* actually zap the local rows */
442b9679d65SBarry Smith   ierr = MatZeroRows(l->A,slen,lrows,0.0,0,0);CHKERRQ(ierr);
443e2eb51b1SBarry Smith   if (diag != 0.0) {
444b9679d65SBarry Smith     Mat_SeqDense *ll = (Mat_SeqDense*)l->A->data;
445b9679d65SBarry Smith     PetscInt     m   = ll->lda, i;
446b9679d65SBarry Smith 
447b9679d65SBarry Smith     for (i=0; i<slen; i++) {
448b9679d65SBarry Smith       ll->v[lrows[i] + m*(A->cmap->rstart + lrows[i])] = diag;
449b9679d65SBarry Smith     }
450b9679d65SBarry Smith   }
451606d414cSSatish Balay   ierr = PetscFree(lrows);CHKERRQ(ierr);
4528965ea79SLois Curfman McInnes 
4538965ea79SLois Curfman McInnes   /* wait on sends */
4548965ea79SLois Curfman McInnes   if (nsends) {
455785e854fSJed Brown     ierr = PetscMalloc1(nsends,&send_status);CHKERRQ(ierr);
456ca161407SBarry Smith     ierr = MPI_Waitall(nsends,send_waits,send_status);CHKERRQ(ierr);
457606d414cSSatish Balay     ierr = PetscFree(send_status);CHKERRQ(ierr);
4588965ea79SLois Curfman McInnes   }
459606d414cSSatish Balay   ierr = PetscFree(send_waits);CHKERRQ(ierr);
460606d414cSSatish Balay   ierr = PetscFree(svalues);CHKERRQ(ierr);
4613a40ed3dSBarry Smith   PetscFunctionReturn(0);
4628965ea79SLois Curfman McInnes }
4638965ea79SLois Curfman McInnes 
4644a2ae208SSatish Balay #undef __FUNCT__
4654a2ae208SSatish Balay #define __FUNCT__ "MatMult_MPIDense"
466dfbe8321SBarry Smith PetscErrorCode MatMult_MPIDense(Mat mat,Vec xx,Vec yy)
4678965ea79SLois Curfman McInnes {
46839ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
469dfbe8321SBarry Smith   PetscErrorCode ierr;
470c456f294SBarry Smith 
4713a40ed3dSBarry Smith   PetscFunctionBegin;
472ca9f406cSSatish Balay   ierr = VecScatterBegin(mdn->Mvctx,xx,mdn->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
473ca9f406cSSatish Balay   ierr = VecScatterEnd(mdn->Mvctx,xx,mdn->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
47444cd7ae7SLois Curfman McInnes   ierr = MatMult_SeqDense(mdn->A,mdn->lvec,yy);CHKERRQ(ierr);
4753a40ed3dSBarry Smith   PetscFunctionReturn(0);
4768965ea79SLois Curfman McInnes }
4778965ea79SLois Curfman McInnes 
4784a2ae208SSatish Balay #undef __FUNCT__
4794a2ae208SSatish Balay #define __FUNCT__ "MatMultAdd_MPIDense"
480dfbe8321SBarry Smith PetscErrorCode MatMultAdd_MPIDense(Mat mat,Vec xx,Vec yy,Vec zz)
4818965ea79SLois Curfman McInnes {
48239ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
483dfbe8321SBarry Smith   PetscErrorCode ierr;
484c456f294SBarry Smith 
4853a40ed3dSBarry Smith   PetscFunctionBegin;
486ca9f406cSSatish Balay   ierr = VecScatterBegin(mdn->Mvctx,xx,mdn->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
487ca9f406cSSatish Balay   ierr = VecScatterEnd(mdn->Mvctx,xx,mdn->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
48844cd7ae7SLois Curfman McInnes   ierr = MatMultAdd_SeqDense(mdn->A,mdn->lvec,yy,zz);CHKERRQ(ierr);
4893a40ed3dSBarry Smith   PetscFunctionReturn(0);
4908965ea79SLois Curfman McInnes }
4918965ea79SLois Curfman McInnes 
4924a2ae208SSatish Balay #undef __FUNCT__
4934a2ae208SSatish Balay #define __FUNCT__ "MatMultTranspose_MPIDense"
494dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_MPIDense(Mat A,Vec xx,Vec yy)
495096963f5SLois Curfman McInnes {
496096963f5SLois Curfman McInnes   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
497dfbe8321SBarry Smith   PetscErrorCode ierr;
49887828ca2SBarry Smith   PetscScalar    zero = 0.0;
499096963f5SLois Curfman McInnes 
5003a40ed3dSBarry Smith   PetscFunctionBegin;
5012dcb1b2aSMatthew Knepley   ierr = VecSet(yy,zero);CHKERRQ(ierr);
5027c922b88SBarry Smith   ierr = MatMultTranspose_SeqDense(a->A,xx,a->lvec);CHKERRQ(ierr);
503ca9f406cSSatish Balay   ierr = VecScatterBegin(a->Mvctx,a->lvec,yy,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
504ca9f406cSSatish Balay   ierr = VecScatterEnd(a->Mvctx,a->lvec,yy,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
5053a40ed3dSBarry Smith   PetscFunctionReturn(0);
506096963f5SLois Curfman McInnes }
507096963f5SLois Curfman McInnes 
5084a2ae208SSatish Balay #undef __FUNCT__
5094a2ae208SSatish Balay #define __FUNCT__ "MatMultTransposeAdd_MPIDense"
510dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A,Vec xx,Vec yy,Vec zz)
511096963f5SLois Curfman McInnes {
512096963f5SLois Curfman McInnes   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
513dfbe8321SBarry Smith   PetscErrorCode ierr;
514096963f5SLois Curfman McInnes 
5153a40ed3dSBarry Smith   PetscFunctionBegin;
5163501a2bdSLois Curfman McInnes   ierr = VecCopy(yy,zz);CHKERRQ(ierr);
5177c922b88SBarry Smith   ierr = MatMultTranspose_SeqDense(a->A,xx,a->lvec);CHKERRQ(ierr);
518ca9f406cSSatish Balay   ierr = VecScatterBegin(a->Mvctx,a->lvec,zz,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
519ca9f406cSSatish Balay   ierr = VecScatterEnd(a->Mvctx,a->lvec,zz,ADD_VALUES,SCATTER_REVERSE);CHKERRQ(ierr);
5203a40ed3dSBarry Smith   PetscFunctionReturn(0);
521096963f5SLois Curfman McInnes }
522096963f5SLois Curfman McInnes 
5234a2ae208SSatish Balay #undef __FUNCT__
5244a2ae208SSatish Balay #define __FUNCT__ "MatGetDiagonal_MPIDense"
525dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_MPIDense(Mat A,Vec v)
5268965ea79SLois Curfman McInnes {
52739ddd567SLois Curfman McInnes   Mat_MPIDense   *a    = (Mat_MPIDense*)A->data;
528096963f5SLois Curfman McInnes   Mat_SeqDense   *aloc = (Mat_SeqDense*)a->A->data;
529dfbe8321SBarry Smith   PetscErrorCode ierr;
530d0f46423SBarry Smith   PetscInt       len,i,n,m = A->rmap->n,radd;
53187828ca2SBarry Smith   PetscScalar    *x,zero = 0.0;
532ed3cc1f0SBarry Smith 
5333a40ed3dSBarry Smith   PetscFunctionBegin;
5342dcb1b2aSMatthew Knepley   ierr = VecSet(v,zero);CHKERRQ(ierr);
5351ebc52fbSHong Zhang   ierr = VecGetArray(v,&x);CHKERRQ(ierr);
536096963f5SLois Curfman McInnes   ierr = VecGetSize(v,&n);CHKERRQ(ierr);
537e32f2f54SBarry Smith   if (n != A->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Nonconforming mat and vec");
538d0f46423SBarry Smith   len  = PetscMin(a->A->rmap->n,a->A->cmap->n);
539d0f46423SBarry Smith   radd = A->rmap->rstart*m;
54044cd7ae7SLois Curfman McInnes   for (i=0; i<len; i++) {
541096963f5SLois Curfman McInnes     x[i] = aloc->v[radd + i*m + i];
542096963f5SLois Curfman McInnes   }
5431ebc52fbSHong Zhang   ierr = VecRestoreArray(v,&x);CHKERRQ(ierr);
5443a40ed3dSBarry Smith   PetscFunctionReturn(0);
5458965ea79SLois Curfman McInnes }
5468965ea79SLois Curfman McInnes 
5474a2ae208SSatish Balay #undef __FUNCT__
5484a2ae208SSatish Balay #define __FUNCT__ "MatDestroy_MPIDense"
549dfbe8321SBarry Smith PetscErrorCode MatDestroy_MPIDense(Mat mat)
5508965ea79SLois Curfman McInnes {
5513501a2bdSLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
552dfbe8321SBarry Smith   PetscErrorCode ierr;
553ed3cc1f0SBarry Smith 
5543a40ed3dSBarry Smith   PetscFunctionBegin;
555aa482453SBarry Smith #if defined(PETSC_USE_LOG)
556d0f46423SBarry Smith   PetscLogObjectState((PetscObject)mat,"Rows=%D, Cols=%D",mat->rmap->N,mat->cmap->N);
5578965ea79SLois Curfman McInnes #endif
5588798bf22SSatish Balay   ierr = MatStashDestroy_Private(&mat->stash);CHKERRQ(ierr);
5596bf464f9SBarry Smith   ierr = MatDestroy(&mdn->A);CHKERRQ(ierr);
5606bf464f9SBarry Smith   ierr = VecDestroy(&mdn->lvec);CHKERRQ(ierr);
5616bf464f9SBarry Smith   ierr = VecScatterDestroy(&mdn->Mvctx);CHKERRQ(ierr);
56201b82886SBarry Smith 
563bf0cc555SLisandro Dalcin   ierr = PetscFree(mat->data);CHKERRQ(ierr);
564dbd8c25aSHong Zhang   ierr = PetscObjectChangeTypeName((PetscObject)mat,0);CHKERRQ(ierr);
5658baccfbdSHong Zhang 
5668baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",NULL);CHKERRQ(ierr);
5678baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",NULL);CHKERRQ(ierr);
5688baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
5698baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",NULL);CHKERRQ(ierr);
5708baccfbdSHong Zhang #endif
571bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatGetDiagonalBlock_C",NULL);CHKERRQ(ierr);
572bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",NULL);CHKERRQ(ierr);
573bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMatMult_mpiaij_mpidense_C",NULL);CHKERRQ(ierr);
574bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMatMultSymbolic_mpiaij_mpidense_C",NULL);CHKERRQ(ierr);
575bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMatMultNumeric_mpiaij_mpidense_C",NULL);CHKERRQ(ierr);
5768baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatTransposeMatMult_mpiaij_mpidense_C",NULL);CHKERRQ(ierr);
5778baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatTransposeMatMultSymbolic_mpiaij_mpidense_C",NULL);CHKERRQ(ierr);
5788baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatTransposeMatMultNumeric_mpiaij_mpidense_C",NULL);CHKERRQ(ierr);
5793a40ed3dSBarry Smith   PetscFunctionReturn(0);
5808965ea79SLois Curfman McInnes }
58139ddd567SLois Curfman McInnes 
5824a2ae208SSatish Balay #undef __FUNCT__
5834a2ae208SSatish Balay #define __FUNCT__ "MatView_MPIDense_Binary"
5846849ba73SBarry Smith static PetscErrorCode MatView_MPIDense_Binary(Mat mat,PetscViewer viewer)
5858965ea79SLois Curfman McInnes {
58639ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
587dfbe8321SBarry Smith   PetscErrorCode    ierr;
588aa05aa95SBarry Smith   PetscViewerFormat format;
589aa05aa95SBarry Smith   int               fd;
590d0f46423SBarry Smith   PetscInt          header[4],mmax,N = mat->cmap->N,i,j,m,k;
591aa05aa95SBarry Smith   PetscMPIInt       rank,tag  = ((PetscObject)viewer)->tag,size;
592578230a0SSatish Balay   PetscScalar       *work,*v,*vv;
593aa05aa95SBarry Smith   Mat_SeqDense      *a = (Mat_SeqDense*)mdn->A->data;
5947056b6fcSBarry Smith 
5953a40ed3dSBarry Smith   PetscFunctionBegin;
59639ddd567SLois Curfman McInnes   if (mdn->size == 1) {
59739ddd567SLois Curfman McInnes     ierr = MatView(mdn->A,viewer);CHKERRQ(ierr);
598aa05aa95SBarry Smith   } else {
599aa05aa95SBarry Smith     ierr = PetscViewerBinaryGetDescriptor(viewer,&fd);CHKERRQ(ierr);
600ce94432eSBarry Smith     ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)mat),&rank);CHKERRQ(ierr);
601ce94432eSBarry Smith     ierr = MPI_Comm_size(PetscObjectComm((PetscObject)mat),&size);CHKERRQ(ierr);
602aa05aa95SBarry Smith 
603aa05aa95SBarry Smith     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
604f4403165SShri Abhyankar     if (format == PETSC_VIEWER_NATIVE) {
605aa05aa95SBarry Smith 
606aa05aa95SBarry Smith       if (!rank) {
607aa05aa95SBarry Smith         /* store the matrix as a dense matrix */
6080700a824SBarry Smith         header[0] = MAT_FILE_CLASSID;
609d0f46423SBarry Smith         header[1] = mat->rmap->N;
610aa05aa95SBarry Smith         header[2] = N;
611aa05aa95SBarry Smith         header[3] = MATRIX_BINARY_FORMAT_DENSE;
612aa05aa95SBarry Smith         ierr      = PetscBinaryWrite(fd,header,4,PETSC_INT,PETSC_TRUE);CHKERRQ(ierr);
613aa05aa95SBarry Smith 
614aa05aa95SBarry Smith         /* get largest work array needed for transposing array */
615d0f46423SBarry Smith         mmax = mat->rmap->n;
616aa05aa95SBarry Smith         for (i=1; i<size; i++) {
617d0f46423SBarry Smith           mmax = PetscMax(mmax,mat->rmap->range[i+1] - mat->rmap->range[i]);
6188965ea79SLois Curfman McInnes         }
619785e854fSJed Brown         ierr = PetscMalloc1(mmax*N,&work);CHKERRQ(ierr);
620aa05aa95SBarry Smith 
621aa05aa95SBarry Smith         /* write out local array, by rows */
622d0f46423SBarry Smith         m = mat->rmap->n;
623aa05aa95SBarry Smith         v = a->v;
624aa05aa95SBarry Smith         for (j=0; j<N; j++) {
625aa05aa95SBarry Smith           for (i=0; i<m; i++) {
626578230a0SSatish Balay             work[j + i*N] = *v++;
627aa05aa95SBarry Smith           }
628aa05aa95SBarry Smith         }
629aa05aa95SBarry Smith         ierr = PetscBinaryWrite(fd,work,m*N,PETSC_SCALAR,PETSC_FALSE);CHKERRQ(ierr);
630aa05aa95SBarry Smith         /* get largest work array to receive messages from other processes, excludes process zero */
631aa05aa95SBarry Smith         mmax = 0;
632aa05aa95SBarry Smith         for (i=1; i<size; i++) {
633d0f46423SBarry Smith           mmax = PetscMax(mmax,mat->rmap->range[i+1] - mat->rmap->range[i]);
634aa05aa95SBarry Smith         }
635785e854fSJed Brown         ierr = PetscMalloc1(mmax*N,&vv);CHKERRQ(ierr);
636aa05aa95SBarry Smith         for (k = 1; k < size; k++) {
637f8009846SMatthew Knepley           v    = vv;
638d0f46423SBarry Smith           m    = mat->rmap->range[k+1] - mat->rmap->range[k];
639ce94432eSBarry Smith           ierr = MPIULong_Recv(v,m*N,MPIU_SCALAR,k,tag,PetscObjectComm((PetscObject)mat));CHKERRQ(ierr);
640aa05aa95SBarry Smith 
641aa05aa95SBarry Smith           for (j = 0; j < N; j++) {
642aa05aa95SBarry Smith             for (i = 0; i < m; i++) {
643578230a0SSatish Balay               work[j + i*N] = *v++;
644aa05aa95SBarry Smith             }
645aa05aa95SBarry Smith           }
646aa05aa95SBarry Smith           ierr = PetscBinaryWrite(fd,work,m*N,PETSC_SCALAR,PETSC_FALSE);CHKERRQ(ierr);
647aa05aa95SBarry Smith         }
648aa05aa95SBarry Smith         ierr = PetscFree(work);CHKERRQ(ierr);
649578230a0SSatish Balay         ierr = PetscFree(vv);CHKERRQ(ierr);
650aa05aa95SBarry Smith       } else {
651ce94432eSBarry Smith         ierr = MPIULong_Send(a->v,mat->rmap->n*mat->cmap->N,MPIU_SCALAR,0,tag,PetscObjectComm((PetscObject)mat));CHKERRQ(ierr);
652aa05aa95SBarry Smith       }
653eb3f98d2SBarry Smith     } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"To store a parallel dense matrix you must first call PetscViewerSetFormat(viewer,PETSC_VIEWER_NATIVE)");
654aa05aa95SBarry Smith   }
6553a40ed3dSBarry Smith   PetscFunctionReturn(0);
6568965ea79SLois Curfman McInnes }
6578965ea79SLois Curfman McInnes 
6587da1fb6eSBarry Smith extern PetscErrorCode MatView_SeqDense(Mat,PetscViewer);
6599804daf3SBarry Smith #include <petscdraw.h>
6604a2ae208SSatish Balay #undef __FUNCT__
6614a2ae208SSatish Balay #define __FUNCT__ "MatView_MPIDense_ASCIIorDraworSocket"
6626849ba73SBarry Smith static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
6638965ea79SLois Curfman McInnes {
66439ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
665dfbe8321SBarry Smith   PetscErrorCode    ierr;
6667da1fb6eSBarry Smith   PetscMPIInt       rank = mdn->rank;
66719fd82e9SBarry Smith   PetscViewerType   vtype;
668ace3abfcSBarry Smith   PetscBool         iascii,isdraw;
669b0a32e0cSBarry Smith   PetscViewer       sviewer;
670f3ef73ceSBarry Smith   PetscViewerFormat format;
6718965ea79SLois Curfman McInnes 
6723a40ed3dSBarry Smith   PetscFunctionBegin;
673251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
674251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr);
67532077d6dSBarry Smith   if (iascii) {
676b0a32e0cSBarry Smith     ierr = PetscViewerGetType(viewer,&vtype);CHKERRQ(ierr);
677b0a32e0cSBarry Smith     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
678456192e2SBarry Smith     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
6794e220ebcSLois Curfman McInnes       MatInfo info;
680888f2ed8SSatish Balay       ierr = MatGetInfo(mat,MAT_LOCAL,&info);CHKERRQ(ierr);
6811575c14dSBarry Smith       ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr);
6827b23a99aSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"  [%d] local rows %D nz %D nz alloced %D mem %D \n",rank,mat->rmap->n,(PetscInt)info.nz_used,(PetscInt)info.nz_allocated,(PetscInt)info.memory);CHKERRQ(ierr);
683b0a32e0cSBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
6841575c14dSBarry Smith       ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr);
6855d00a290SHong Zhang       ierr = VecScatterView(mdn->Mvctx,viewer);CHKERRQ(ierr);
6863a40ed3dSBarry Smith       PetscFunctionReturn(0);
687fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
6883a40ed3dSBarry Smith       PetscFunctionReturn(0);
6898965ea79SLois Curfman McInnes     }
690f1af5d2fSBarry Smith   } else if (isdraw) {
691b0a32e0cSBarry Smith     PetscDraw draw;
692ace3abfcSBarry Smith     PetscBool isnull;
693f1af5d2fSBarry Smith 
694b0a32e0cSBarry Smith     ierr = PetscViewerDrawGetDraw(viewer,0,&draw);CHKERRQ(ierr);
695b0a32e0cSBarry Smith     ierr = PetscDrawIsNull(draw,&isnull);CHKERRQ(ierr);
696f1af5d2fSBarry Smith     if (isnull) PetscFunctionReturn(0);
697f1af5d2fSBarry Smith   }
69877ed5343SBarry Smith 
6997da1fb6eSBarry Smith   {
7008965ea79SLois Curfman McInnes     /* assemble the entire matrix onto first processor. */
7018965ea79SLois Curfman McInnes     Mat         A;
702d0f46423SBarry Smith     PetscInt    M = mat->rmap->N,N = mat->cmap->N,m,row,i,nz;
703ba8c8a56SBarry Smith     PetscInt    *cols;
704ba8c8a56SBarry Smith     PetscScalar *vals;
7058965ea79SLois Curfman McInnes 
706ce94432eSBarry Smith     ierr = MatCreate(PetscObjectComm((PetscObject)mat),&A);CHKERRQ(ierr);
7078965ea79SLois Curfman McInnes     if (!rank) {
708f69a0ea3SMatthew Knepley       ierr = MatSetSizes(A,M,N,M,N);CHKERRQ(ierr);
7093a40ed3dSBarry Smith     } else {
710f69a0ea3SMatthew Knepley       ierr = MatSetSizes(A,0,0,M,N);CHKERRQ(ierr);
7118965ea79SLois Curfman McInnes     }
7127adad957SLisandro Dalcin     /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */
713878740d9SKris Buschelman     ierr = MatSetType(A,MATMPIDENSE);CHKERRQ(ierr);
7140298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(A,NULL);CHKERRQ(ierr);
7153bb1ff40SBarry Smith     ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)A);CHKERRQ(ierr);
7168965ea79SLois Curfman McInnes 
71739ddd567SLois Curfman McInnes     /* Copy the matrix ... This isn't the most efficient means,
71839ddd567SLois Curfman McInnes        but it's quick for now */
71951022da4SBarry Smith     A->insertmode = INSERT_VALUES;
7202205254eSKarl Rupp 
7212205254eSKarl Rupp     row = mat->rmap->rstart;
7222205254eSKarl Rupp     m   = mdn->A->rmap->n;
7238965ea79SLois Curfman McInnes     for (i=0; i<m; i++) {
724ba8c8a56SBarry Smith       ierr = MatGetRow_MPIDense(mat,row,&nz,&cols,&vals);CHKERRQ(ierr);
725ba8c8a56SBarry Smith       ierr = MatSetValues_MPIDense(A,1,&row,nz,cols,vals,INSERT_VALUES);CHKERRQ(ierr);
726ba8c8a56SBarry Smith       ierr = MatRestoreRow_MPIDense(mat,row,&nz,&cols,&vals);CHKERRQ(ierr);
72739ddd567SLois Curfman McInnes       row++;
7288965ea79SLois Curfman McInnes     }
7298965ea79SLois Curfman McInnes 
7306d4a8577SBarry Smith     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
7316d4a8577SBarry Smith     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
7323f08860eSBarry Smith     ierr = PetscViewerGetSubViewer(viewer,PETSC_COMM_SELF,&sviewer);CHKERRQ(ierr);
733b9b97703SBarry Smith     if (!rank) {
7347da1fb6eSBarry Smith         ierr = MatView_SeqDense(((Mat_MPIDense*)(A->data))->A,sviewer);CHKERRQ(ierr);
7358965ea79SLois Curfman McInnes     }
7363f08860eSBarry Smith     ierr = PetscViewerRestoreSubViewer(viewer,PETSC_COMM_SELF,&sviewer);CHKERRQ(ierr);
737b0a32e0cSBarry Smith     ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
7386bf464f9SBarry Smith     ierr = MatDestroy(&A);CHKERRQ(ierr);
7398965ea79SLois Curfman McInnes   }
7403a40ed3dSBarry Smith   PetscFunctionReturn(0);
7418965ea79SLois Curfman McInnes }
7428965ea79SLois Curfman McInnes 
7434a2ae208SSatish Balay #undef __FUNCT__
7444a2ae208SSatish Balay #define __FUNCT__ "MatView_MPIDense"
745dfbe8321SBarry Smith PetscErrorCode MatView_MPIDense(Mat mat,PetscViewer viewer)
7468965ea79SLois Curfman McInnes {
747dfbe8321SBarry Smith   PetscErrorCode ierr;
748ace3abfcSBarry Smith   PetscBool      iascii,isbinary,isdraw,issocket;
7498965ea79SLois Curfman McInnes 
750433994e6SBarry Smith   PetscFunctionBegin;
751251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
752251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr);
753251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERSOCKET,&issocket);CHKERRQ(ierr);
754251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr);
7550f5bd95cSBarry Smith 
75632077d6dSBarry Smith   if (iascii || issocket || isdraw) {
757f1af5d2fSBarry Smith     ierr = MatView_MPIDense_ASCIIorDraworSocket(mat,viewer);CHKERRQ(ierr);
7580f5bd95cSBarry Smith   } else if (isbinary) {
7593a40ed3dSBarry Smith     ierr = MatView_MPIDense_Binary(mat,viewer);CHKERRQ(ierr);
76011aeaf0aSBarry Smith   }
7613a40ed3dSBarry Smith   PetscFunctionReturn(0);
7628965ea79SLois Curfman McInnes }
7638965ea79SLois Curfman McInnes 
7644a2ae208SSatish Balay #undef __FUNCT__
7654a2ae208SSatish Balay #define __FUNCT__ "MatGetInfo_MPIDense"
766dfbe8321SBarry Smith PetscErrorCode MatGetInfo_MPIDense(Mat A,MatInfoType flag,MatInfo *info)
7678965ea79SLois Curfman McInnes {
7683501a2bdSLois Curfman McInnes   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
7693501a2bdSLois Curfman McInnes   Mat            mdn  = mat->A;
770dfbe8321SBarry Smith   PetscErrorCode ierr;
771329f5518SBarry Smith   PetscReal      isend[5],irecv[5];
7728965ea79SLois Curfman McInnes 
7733a40ed3dSBarry Smith   PetscFunctionBegin;
7744e220ebcSLois Curfman McInnes   info->block_size = 1.0;
7752205254eSKarl Rupp 
7764e220ebcSLois Curfman McInnes   ierr = MatGetInfo(mdn,MAT_LOCAL,info);CHKERRQ(ierr);
7772205254eSKarl Rupp 
7784e220ebcSLois Curfman McInnes   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
7794e220ebcSLois Curfman McInnes   isend[3] = info->memory;  isend[4] = info->mallocs;
7808965ea79SLois Curfman McInnes   if (flag == MAT_LOCAL) {
7814e220ebcSLois Curfman McInnes     info->nz_used      = isend[0];
7824e220ebcSLois Curfman McInnes     info->nz_allocated = isend[1];
7834e220ebcSLois Curfman McInnes     info->nz_unneeded  = isend[2];
7844e220ebcSLois Curfman McInnes     info->memory       = isend[3];
7854e220ebcSLois Curfman McInnes     info->mallocs      = isend[4];
7868965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_MAX) {
787ce94432eSBarry Smith     ierr = MPI_Allreduce(isend,irecv,5,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
7882205254eSKarl Rupp 
7894e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7904e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7914e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7924e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7934e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7948965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_SUM) {
795ce94432eSBarry Smith     ierr = MPI_Allreduce(isend,irecv,5,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
7962205254eSKarl Rupp 
7974e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7984e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7994e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
8004e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
8014e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
8028965ea79SLois Curfman McInnes   }
8034e220ebcSLois Curfman McInnes   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
8044e220ebcSLois Curfman McInnes   info->fill_ratio_needed = 0;
8054e220ebcSLois Curfman McInnes   info->factor_mallocs    = 0;
8063a40ed3dSBarry Smith   PetscFunctionReturn(0);
8078965ea79SLois Curfman McInnes }
8088965ea79SLois Curfman McInnes 
8094a2ae208SSatish Balay #undef __FUNCT__
8104a2ae208SSatish Balay #define __FUNCT__ "MatSetOption_MPIDense"
811ace3abfcSBarry Smith PetscErrorCode MatSetOption_MPIDense(Mat A,MatOption op,PetscBool flg)
8128965ea79SLois Curfman McInnes {
81339ddd567SLois Curfman McInnes   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
814dfbe8321SBarry Smith   PetscErrorCode ierr;
8158965ea79SLois Curfman McInnes 
8163a40ed3dSBarry Smith   PetscFunctionBegin;
81712c028f9SKris Buschelman   switch (op) {
818512a5fc5SBarry Smith   case MAT_NEW_NONZERO_LOCATIONS:
81912c028f9SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
82012c028f9SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
8214e0d8c25SBarry Smith     ierr = MatSetOption(a->A,op,flg);CHKERRQ(ierr);
82212c028f9SKris Buschelman     break;
82312c028f9SKris Buschelman   case MAT_ROW_ORIENTED:
8244e0d8c25SBarry Smith     a->roworiented = flg;
8252205254eSKarl Rupp 
8264e0d8c25SBarry Smith     ierr = MatSetOption(a->A,op,flg);CHKERRQ(ierr);
82712c028f9SKris Buschelman     break;
8284e0d8c25SBarry Smith   case MAT_NEW_DIAGONALS:
82913fa8e87SLisandro Dalcin   case MAT_KEEP_NONZERO_PATTERN:
83012c028f9SKris Buschelman   case MAT_USE_HASH_TABLE:
831290bbb0aSBarry Smith     ierr = PetscInfo1(A,"Option %s ignored\n",MatOptions[op]);CHKERRQ(ierr);
83212c028f9SKris Buschelman     break;
83312c028f9SKris Buschelman   case MAT_IGNORE_OFF_PROC_ENTRIES:
8344e0d8c25SBarry Smith     a->donotstash = flg;
83512c028f9SKris Buschelman     break;
83677e54ba9SKris Buschelman   case MAT_SYMMETRIC:
83777e54ba9SKris Buschelman   case MAT_STRUCTURALLY_SYMMETRIC:
8389a4540c5SBarry Smith   case MAT_HERMITIAN:
8399a4540c5SBarry Smith   case MAT_SYMMETRY_ETERNAL:
840600fe468SBarry Smith   case MAT_IGNORE_LOWER_TRIANGULAR:
841290bbb0aSBarry Smith     ierr = PetscInfo1(A,"Option %s ignored\n",MatOptions[op]);CHKERRQ(ierr);
84277e54ba9SKris Buschelman     break;
84312c028f9SKris Buschelman   default:
844e32f2f54SBarry Smith     SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"unknown option %s",MatOptions[op]);
8453a40ed3dSBarry Smith   }
8463a40ed3dSBarry Smith   PetscFunctionReturn(0);
8478965ea79SLois Curfman McInnes }
8488965ea79SLois Curfman McInnes 
8498965ea79SLois Curfman McInnes 
8504a2ae208SSatish Balay #undef __FUNCT__
8514a2ae208SSatish Balay #define __FUNCT__ "MatDiagonalScale_MPIDense"
852dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_MPIDense(Mat A,Vec ll,Vec rr)
8535b2fa520SLois Curfman McInnes {
8545b2fa520SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)A->data;
8555b2fa520SLois Curfman McInnes   Mat_SeqDense   *mat = (Mat_SeqDense*)mdn->A->data;
85687828ca2SBarry Smith   PetscScalar    *l,*r,x,*v;
857dfbe8321SBarry Smith   PetscErrorCode ierr;
858d0f46423SBarry Smith   PetscInt       i,j,s2a,s3a,s2,s3,m=mdn->A->rmap->n,n=mdn->A->cmap->n;
8595b2fa520SLois Curfman McInnes 
8605b2fa520SLois Curfman McInnes   PetscFunctionBegin;
86172d926a5SLois Curfman McInnes   ierr = MatGetLocalSize(A,&s2,&s3);CHKERRQ(ierr);
8625b2fa520SLois Curfman McInnes   if (ll) {
86372d926a5SLois Curfman McInnes     ierr = VecGetLocalSize(ll,&s2a);CHKERRQ(ierr);
864e32f2f54SBarry Smith     if (s2a != s2) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Left scaling vector non-conforming local size, %d != %d.", s2a, s2);
8651ebc52fbSHong Zhang     ierr = VecGetArray(ll,&l);CHKERRQ(ierr);
8665b2fa520SLois Curfman McInnes     for (i=0; i<m; i++) {
8675b2fa520SLois Curfman McInnes       x = l[i];
8685b2fa520SLois Curfman McInnes       v = mat->v + i;
8695b2fa520SLois Curfman McInnes       for (j=0; j<n; j++) { (*v) *= x; v+= m;}
8705b2fa520SLois Curfman McInnes     }
8711ebc52fbSHong Zhang     ierr = VecRestoreArray(ll,&l);CHKERRQ(ierr);
872efee365bSSatish Balay     ierr = PetscLogFlops(n*m);CHKERRQ(ierr);
8735b2fa520SLois Curfman McInnes   }
8745b2fa520SLois Curfman McInnes   if (rr) {
875175be7b4SMatthew Knepley     ierr = VecGetLocalSize(rr,&s3a);CHKERRQ(ierr);
876e32f2f54SBarry Smith     if (s3a != s3) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Right scaling vec non-conforming local size, %d != %d.", s3a, s3);
877ca9f406cSSatish Balay     ierr = VecScatterBegin(mdn->Mvctx,rr,mdn->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
878ca9f406cSSatish Balay     ierr = VecScatterEnd(mdn->Mvctx,rr,mdn->lvec,INSERT_VALUES,SCATTER_FORWARD);CHKERRQ(ierr);
8791ebc52fbSHong Zhang     ierr = VecGetArray(mdn->lvec,&r);CHKERRQ(ierr);
8805b2fa520SLois Curfman McInnes     for (i=0; i<n; i++) {
8815b2fa520SLois Curfman McInnes       x = r[i];
8825b2fa520SLois Curfman McInnes       v = mat->v + i*m;
8832205254eSKarl Rupp       for (j=0; j<m; j++) (*v++) *= x;
8845b2fa520SLois Curfman McInnes     }
8851ebc52fbSHong Zhang     ierr = VecRestoreArray(mdn->lvec,&r);CHKERRQ(ierr);
886efee365bSSatish Balay     ierr = PetscLogFlops(n*m);CHKERRQ(ierr);
8875b2fa520SLois Curfman McInnes   }
8885b2fa520SLois Curfman McInnes   PetscFunctionReturn(0);
8895b2fa520SLois Curfman McInnes }
8905b2fa520SLois Curfman McInnes 
8914a2ae208SSatish Balay #undef __FUNCT__
8924a2ae208SSatish Balay #define __FUNCT__ "MatNorm_MPIDense"
893dfbe8321SBarry Smith PetscErrorCode MatNorm_MPIDense(Mat A,NormType type,PetscReal *nrm)
894096963f5SLois Curfman McInnes {
8953501a2bdSLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)A->data;
8963501a2bdSLois Curfman McInnes   Mat_SeqDense   *mat = (Mat_SeqDense*)mdn->A->data;
897dfbe8321SBarry Smith   PetscErrorCode ierr;
89813f74950SBarry Smith   PetscInt       i,j;
899329f5518SBarry Smith   PetscReal      sum = 0.0;
90087828ca2SBarry Smith   PetscScalar    *v  = mat->v;
9013501a2bdSLois Curfman McInnes 
9023a40ed3dSBarry Smith   PetscFunctionBegin;
9033501a2bdSLois Curfman McInnes   if (mdn->size == 1) {
904064f8208SBarry Smith     ierr =  MatNorm(mdn->A,type,nrm);CHKERRQ(ierr);
9053501a2bdSLois Curfman McInnes   } else {
9063501a2bdSLois Curfman McInnes     if (type == NORM_FROBENIUS) {
907d0f46423SBarry Smith       for (i=0; i<mdn->A->cmap->n*mdn->A->rmap->n; i++) {
908329f5518SBarry Smith         sum += PetscRealPart(PetscConj(*v)*(*v)); v++;
9093501a2bdSLois Curfman McInnes       }
910ce94432eSBarry Smith       ierr = MPI_Allreduce(&sum,nrm,1,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
9118f1a2a5eSBarry Smith       *nrm = PetscSqrtReal(*nrm);
912dc0b31edSSatish Balay       ierr = PetscLogFlops(2.0*mdn->A->cmap->n*mdn->A->rmap->n);CHKERRQ(ierr);
9133a40ed3dSBarry Smith     } else if (type == NORM_1) {
914329f5518SBarry Smith       PetscReal *tmp,*tmp2;
915dcca6d9dSJed Brown       ierr = PetscMalloc2(A->cmap->N,&tmp,A->cmap->N,&tmp2);CHKERRQ(ierr);
91674ed9c26SBarry Smith       ierr = PetscMemzero(tmp,A->cmap->N*sizeof(PetscReal));CHKERRQ(ierr);
91774ed9c26SBarry Smith       ierr = PetscMemzero(tmp2,A->cmap->N*sizeof(PetscReal));CHKERRQ(ierr);
918064f8208SBarry Smith       *nrm = 0.0;
9193501a2bdSLois Curfman McInnes       v    = mat->v;
920d0f46423SBarry Smith       for (j=0; j<mdn->A->cmap->n; j++) {
921d0f46423SBarry Smith         for (i=0; i<mdn->A->rmap->n; i++) {
92267e560aaSBarry Smith           tmp[j] += PetscAbsScalar(*v);  v++;
9233501a2bdSLois Curfman McInnes         }
9243501a2bdSLois Curfman McInnes       }
925ce94432eSBarry Smith       ierr = MPI_Allreduce(tmp,tmp2,A->cmap->N,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
926d0f46423SBarry Smith       for (j=0; j<A->cmap->N; j++) {
927064f8208SBarry Smith         if (tmp2[j] > *nrm) *nrm = tmp2[j];
9283501a2bdSLois Curfman McInnes       }
9298627564fSBarry Smith       ierr = PetscFree2(tmp,tmp2);CHKERRQ(ierr);
930d0f46423SBarry Smith       ierr = PetscLogFlops(A->cmap->n*A->rmap->n);CHKERRQ(ierr);
9313a40ed3dSBarry Smith     } else if (type == NORM_INFINITY) { /* max row norm */
932329f5518SBarry Smith       PetscReal ntemp;
9333501a2bdSLois Curfman McInnes       ierr = MatNorm(mdn->A,type,&ntemp);CHKERRQ(ierr);
934ce94432eSBarry Smith       ierr = MPI_Allreduce(&ntemp,nrm,1,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
935ce94432eSBarry Smith     } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for two norm");
9363501a2bdSLois Curfman McInnes   }
9373a40ed3dSBarry Smith   PetscFunctionReturn(0);
9383501a2bdSLois Curfman McInnes }
9393501a2bdSLois Curfman McInnes 
9404a2ae208SSatish Balay #undef __FUNCT__
9414a2ae208SSatish Balay #define __FUNCT__ "MatTranspose_MPIDense"
942fc4dec0aSBarry Smith PetscErrorCode MatTranspose_MPIDense(Mat A,MatReuse reuse,Mat *matout)
9433501a2bdSLois Curfman McInnes {
9443501a2bdSLois Curfman McInnes   Mat_MPIDense   *a    = (Mat_MPIDense*)A->data;
9453501a2bdSLois Curfman McInnes   Mat_SeqDense   *Aloc = (Mat_SeqDense*)a->A->data;
9463501a2bdSLois Curfman McInnes   Mat            B;
947d0f46423SBarry Smith   PetscInt       M = A->rmap->N,N = A->cmap->N,m,n,*rwork,rstart = A->rmap->rstart;
9486849ba73SBarry Smith   PetscErrorCode ierr;
94913f74950SBarry Smith   PetscInt       j,i;
95087828ca2SBarry Smith   PetscScalar    *v;
9513501a2bdSLois Curfman McInnes 
9523a40ed3dSBarry Smith   PetscFunctionBegin;
953ce94432eSBarry Smith   if (reuse == MAT_REUSE_MATRIX && A == *matout && M != N) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Supports square matrix only in-place");
954fc4dec0aSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || A == *matout) {
955ce94432eSBarry Smith     ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
956d0f46423SBarry Smith     ierr = MatSetSizes(B,A->cmap->n,A->rmap->n,N,M);CHKERRQ(ierr);
9577adad957SLisandro Dalcin     ierr = MatSetType(B,((PetscObject)A)->type_name);CHKERRQ(ierr);
9580298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(B,NULL);CHKERRQ(ierr);
959fc4dec0aSBarry Smith   } else {
960fc4dec0aSBarry Smith     B = *matout;
961fc4dec0aSBarry Smith   }
9623501a2bdSLois Curfman McInnes 
963d0f46423SBarry Smith   m    = a->A->rmap->n; n = a->A->cmap->n; v = Aloc->v;
964785e854fSJed Brown   ierr = PetscMalloc1(m,&rwork);CHKERRQ(ierr);
9653501a2bdSLois Curfman McInnes   for (i=0; i<m; i++) rwork[i] = rstart + i;
9661acff37aSSatish Balay   for (j=0; j<n; j++) {
9673501a2bdSLois Curfman McInnes     ierr = MatSetValues(B,1,&j,m,rwork,v,INSERT_VALUES);CHKERRQ(ierr);
9683501a2bdSLois Curfman McInnes     v   += m;
9693501a2bdSLois Curfman McInnes   }
970606d414cSSatish Balay   ierr = PetscFree(rwork);CHKERRQ(ierr);
9716d4a8577SBarry Smith   ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
9726d4a8577SBarry Smith   ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
973815cbec1SBarry Smith   if (reuse == MAT_INITIAL_MATRIX || *matout != A) {
9743501a2bdSLois Curfman McInnes     *matout = B;
9753501a2bdSLois Curfman McInnes   } else {
97628be2f97SBarry Smith     ierr = MatHeaderMerge(A,&B);CHKERRQ(ierr);
9773501a2bdSLois Curfman McInnes   }
9783a40ed3dSBarry Smith   PetscFunctionReturn(0);
979096963f5SLois Curfman McInnes }
980096963f5SLois Curfman McInnes 
98144cd7ae7SLois Curfman McInnes 
9826849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat,MatDuplicateOption,Mat*);
983d84338a6SBarry Smith extern PetscErrorCode MatScale_MPIDense(Mat,PetscScalar);
9848965ea79SLois Curfman McInnes 
9854a2ae208SSatish Balay #undef __FUNCT__
9864994cf47SJed Brown #define __FUNCT__ "MatSetUp_MPIDense"
9874994cf47SJed Brown PetscErrorCode MatSetUp_MPIDense(Mat A)
988273d9f13SBarry Smith {
989dfbe8321SBarry Smith   PetscErrorCode ierr;
990273d9f13SBarry Smith 
991273d9f13SBarry Smith   PetscFunctionBegin;
992273d9f13SBarry Smith   ierr =  MatMPIDenseSetPreallocation(A,0);CHKERRQ(ierr);
993273d9f13SBarry Smith   PetscFunctionReturn(0);
994273d9f13SBarry Smith }
995273d9f13SBarry Smith 
99630716080SHong Zhang #undef __FUNCT__
997488007eeSBarry Smith #define __FUNCT__ "MatAXPY_MPIDense"
998488007eeSBarry Smith PetscErrorCode MatAXPY_MPIDense(Mat Y,PetscScalar alpha,Mat X,MatStructure str)
999488007eeSBarry Smith {
1000488007eeSBarry Smith   PetscErrorCode ierr;
1001488007eeSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)Y->data, *B = (Mat_MPIDense*)X->data;
1002488007eeSBarry Smith 
1003488007eeSBarry Smith   PetscFunctionBegin;
1004488007eeSBarry Smith   ierr = MatAXPY(A->A,alpha,B->A,str);CHKERRQ(ierr);
1005a3fa217bSJose E. Roman   ierr = PetscObjectStateIncrease((PetscObject)Y);CHKERRQ(ierr);
1006488007eeSBarry Smith   PetscFunctionReturn(0);
1007488007eeSBarry Smith }
1008488007eeSBarry Smith 
1009ba337c44SJed Brown #undef __FUNCT__
1010ba337c44SJed Brown #define __FUNCT__ "MatConjugate_MPIDense"
10117087cfbeSBarry Smith PetscErrorCode  MatConjugate_MPIDense(Mat mat)
1012ba337c44SJed Brown {
1013ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
1014ba337c44SJed Brown   PetscErrorCode ierr;
1015ba337c44SJed Brown 
1016ba337c44SJed Brown   PetscFunctionBegin;
1017ba337c44SJed Brown   ierr = MatConjugate(a->A);CHKERRQ(ierr);
1018ba337c44SJed Brown   PetscFunctionReturn(0);
1019ba337c44SJed Brown }
1020ba337c44SJed Brown 
1021ba337c44SJed Brown #undef __FUNCT__
1022ba337c44SJed Brown #define __FUNCT__ "MatRealPart_MPIDense"
1023ba337c44SJed Brown PetscErrorCode MatRealPart_MPIDense(Mat A)
1024ba337c44SJed Brown {
1025ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
1026ba337c44SJed Brown   PetscErrorCode ierr;
1027ba337c44SJed Brown 
1028ba337c44SJed Brown   PetscFunctionBegin;
1029ba337c44SJed Brown   ierr = MatRealPart(a->A);CHKERRQ(ierr);
1030ba337c44SJed Brown   PetscFunctionReturn(0);
1031ba337c44SJed Brown }
1032ba337c44SJed Brown 
1033ba337c44SJed Brown #undef __FUNCT__
1034ba337c44SJed Brown #define __FUNCT__ "MatImaginaryPart_MPIDense"
1035ba337c44SJed Brown PetscErrorCode MatImaginaryPart_MPIDense(Mat A)
1036ba337c44SJed Brown {
1037ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
1038ba337c44SJed Brown   PetscErrorCode ierr;
1039ba337c44SJed Brown 
1040ba337c44SJed Brown   PetscFunctionBegin;
1041ba337c44SJed Brown   ierr = MatImaginaryPart(a->A);CHKERRQ(ierr);
1042ba337c44SJed Brown   PetscFunctionReturn(0);
1043ba337c44SJed Brown }
1044ba337c44SJed Brown 
10450716a85fSBarry Smith extern PetscErrorCode MatGetColumnNorms_SeqDense(Mat,NormType,PetscReal*);
10460716a85fSBarry Smith #undef __FUNCT__
10470716a85fSBarry Smith #define __FUNCT__ "MatGetColumnNorms_MPIDense"
10480716a85fSBarry Smith PetscErrorCode MatGetColumnNorms_MPIDense(Mat A,NormType type,PetscReal *norms)
10490716a85fSBarry Smith {
10500716a85fSBarry Smith   PetscErrorCode ierr;
10510716a85fSBarry Smith   PetscInt       i,n;
10520716a85fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
10530716a85fSBarry Smith   PetscReal      *work;
10540716a85fSBarry Smith 
10550716a85fSBarry Smith   PetscFunctionBegin;
10560298fd71SBarry Smith   ierr = MatGetSize(A,NULL,&n);CHKERRQ(ierr);
1057785e854fSJed Brown   ierr = PetscMalloc1(n,&work);CHKERRQ(ierr);
10580716a85fSBarry Smith   ierr = MatGetColumnNorms_SeqDense(a->A,type,work);CHKERRQ(ierr);
10590716a85fSBarry Smith   if (type == NORM_2) {
10600716a85fSBarry Smith     for (i=0; i<n; i++) work[i] *= work[i];
10610716a85fSBarry Smith   }
10620716a85fSBarry Smith   if (type == NORM_INFINITY) {
10630716a85fSBarry Smith     ierr = MPI_Allreduce(work,norms,n,MPIU_REAL,MPIU_MAX,A->hdr.comm);CHKERRQ(ierr);
10640716a85fSBarry Smith   } else {
10650716a85fSBarry Smith     ierr = MPI_Allreduce(work,norms,n,MPIU_REAL,MPIU_SUM,A->hdr.comm);CHKERRQ(ierr);
10660716a85fSBarry Smith   }
10670716a85fSBarry Smith   ierr = PetscFree(work);CHKERRQ(ierr);
10680716a85fSBarry Smith   if (type == NORM_2) {
10698f1a2a5eSBarry Smith     for (i=0; i<n; i++) norms[i] = PetscSqrtReal(norms[i]);
10700716a85fSBarry Smith   }
10710716a85fSBarry Smith   PetscFunctionReturn(0);
10720716a85fSBarry Smith }
10730716a85fSBarry Smith 
107473a71a0fSBarry Smith #undef __FUNCT__
107573a71a0fSBarry Smith #define __FUNCT__ "MatSetRandom_MPIDense"
107673a71a0fSBarry Smith static PetscErrorCode  MatSetRandom_MPIDense(Mat x,PetscRandom rctx)
107773a71a0fSBarry Smith {
107873a71a0fSBarry Smith   Mat_MPIDense   *d = (Mat_MPIDense*)x->data;
107973a71a0fSBarry Smith   PetscErrorCode ierr;
108073a71a0fSBarry Smith   PetscScalar    *a;
108173a71a0fSBarry Smith   PetscInt       m,n,i;
108273a71a0fSBarry Smith 
108373a71a0fSBarry Smith   PetscFunctionBegin;
108473a71a0fSBarry Smith   ierr = MatGetSize(d->A,&m,&n);CHKERRQ(ierr);
10858c778c55SBarry Smith   ierr = MatDenseGetArray(d->A,&a);CHKERRQ(ierr);
108673a71a0fSBarry Smith   for (i=0; i<m*n; i++) {
108773a71a0fSBarry Smith     ierr = PetscRandomGetValue(rctx,a+i);CHKERRQ(ierr);
108873a71a0fSBarry Smith   }
10898c778c55SBarry Smith   ierr = MatDenseRestoreArray(d->A,&a);CHKERRQ(ierr);
109073a71a0fSBarry Smith   PetscFunctionReturn(0);
109173a71a0fSBarry Smith }
109273a71a0fSBarry Smith 
1093fd4e9aacSBarry Smith extern PetscErrorCode MatMatMultNumeric_MPIDense(Mat A,Mat,Mat);
1094fd4e9aacSBarry Smith 
10953b49f96aSBarry Smith #undef __FUNCT__
10963b49f96aSBarry Smith #define __FUNCT__ "MatMissingDiagonal_MPIDense"
10973b49f96aSBarry Smith static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A,PetscBool  *missing,PetscInt *d)
10983b49f96aSBarry Smith {
10993b49f96aSBarry Smith   PetscFunctionBegin;
11003b49f96aSBarry Smith   *missing = PETSC_FALSE;
11013b49f96aSBarry Smith   PetscFunctionReturn(0);
11023b49f96aSBarry Smith }
11033b49f96aSBarry Smith 
11048965ea79SLois Curfman McInnes /* -------------------------------------------------------------------*/
110509dc0095SBarry Smith static struct _MatOps MatOps_Values = { MatSetValues_MPIDense,
110609dc0095SBarry Smith                                         MatGetRow_MPIDense,
110709dc0095SBarry Smith                                         MatRestoreRow_MPIDense,
110809dc0095SBarry Smith                                         MatMult_MPIDense,
110997304618SKris Buschelman                                 /*  4*/ MatMultAdd_MPIDense,
11107c922b88SBarry Smith                                         MatMultTranspose_MPIDense,
11117c922b88SBarry Smith                                         MatMultTransposeAdd_MPIDense,
11128965ea79SLois Curfman McInnes                                         0,
111309dc0095SBarry Smith                                         0,
111409dc0095SBarry Smith                                         0,
111597304618SKris Buschelman                                 /* 10*/ 0,
111609dc0095SBarry Smith                                         0,
111709dc0095SBarry Smith                                         0,
111809dc0095SBarry Smith                                         0,
111909dc0095SBarry Smith                                         MatTranspose_MPIDense,
112097304618SKris Buschelman                                 /* 15*/ MatGetInfo_MPIDense,
11216e4ee0c6SHong Zhang                                         MatEqual_MPIDense,
112209dc0095SBarry Smith                                         MatGetDiagonal_MPIDense,
11235b2fa520SLois Curfman McInnes                                         MatDiagonalScale_MPIDense,
112409dc0095SBarry Smith                                         MatNorm_MPIDense,
112597304618SKris Buschelman                                 /* 20*/ MatAssemblyBegin_MPIDense,
112609dc0095SBarry Smith                                         MatAssemblyEnd_MPIDense,
112709dc0095SBarry Smith                                         MatSetOption_MPIDense,
112809dc0095SBarry Smith                                         MatZeroEntries_MPIDense,
1129d519adbfSMatthew Knepley                                 /* 24*/ MatZeroRows_MPIDense,
1130919b68f7SBarry Smith                                         0,
113101b82886SBarry Smith                                         0,
113201b82886SBarry Smith                                         0,
113301b82886SBarry Smith                                         0,
11344994cf47SJed Brown                                 /* 29*/ MatSetUp_MPIDense,
1135273d9f13SBarry Smith                                         0,
113609dc0095SBarry Smith                                         0,
11378c778c55SBarry Smith                                         0,
11388c778c55SBarry Smith                                         0,
1139d519adbfSMatthew Knepley                                 /* 34*/ MatDuplicate_MPIDense,
114009dc0095SBarry Smith                                         0,
114109dc0095SBarry Smith                                         0,
114209dc0095SBarry Smith                                         0,
114309dc0095SBarry Smith                                         0,
1144d519adbfSMatthew Knepley                                 /* 39*/ MatAXPY_MPIDense,
11452ce60cd0SSatish Balay                                         MatGetSubMatrices_MPIDense,
114609dc0095SBarry Smith                                         0,
114709dc0095SBarry Smith                                         MatGetValues_MPIDense,
114809dc0095SBarry Smith                                         0,
1149d519adbfSMatthew Knepley                                 /* 44*/ 0,
115009dc0095SBarry Smith                                         MatScale_MPIDense,
11517d68702bSBarry Smith                                         MatShift_Basic,
115209dc0095SBarry Smith                                         0,
115309dc0095SBarry Smith                                         0,
115473a71a0fSBarry Smith                                 /* 49*/ MatSetRandom_MPIDense,
115509dc0095SBarry Smith                                         0,
115609dc0095SBarry Smith                                         0,
115709dc0095SBarry Smith                                         0,
115809dc0095SBarry Smith                                         0,
1159d519adbfSMatthew Knepley                                 /* 54*/ 0,
116009dc0095SBarry Smith                                         0,
116109dc0095SBarry Smith                                         0,
116209dc0095SBarry Smith                                         0,
116309dc0095SBarry Smith                                         0,
1164d519adbfSMatthew Knepley                                 /* 59*/ MatGetSubMatrix_MPIDense,
1165b9b97703SBarry Smith                                         MatDestroy_MPIDense,
1166b9b97703SBarry Smith                                         MatView_MPIDense,
1167357abbc8SBarry Smith                                         0,
116897304618SKris Buschelman                                         0,
1169d519adbfSMatthew Knepley                                 /* 64*/ 0,
117097304618SKris Buschelman                                         0,
117197304618SKris Buschelman                                         0,
117297304618SKris Buschelman                                         0,
117397304618SKris Buschelman                                         0,
1174d519adbfSMatthew Knepley                                 /* 69*/ 0,
117597304618SKris Buschelman                                         0,
117697304618SKris Buschelman                                         0,
117797304618SKris Buschelman                                         0,
117897304618SKris Buschelman                                         0,
1179d519adbfSMatthew Knepley                                 /* 74*/ 0,
118097304618SKris Buschelman                                         0,
118197304618SKris Buschelman                                         0,
118297304618SKris Buschelman                                         0,
118397304618SKris Buschelman                                         0,
1184d519adbfSMatthew Knepley                                 /* 79*/ 0,
118597304618SKris Buschelman                                         0,
118697304618SKris Buschelman                                         0,
118797304618SKris Buschelman                                         0,
11885bba2384SShri Abhyankar                                 /* 83*/ MatLoad_MPIDense,
1189865e5f61SKris Buschelman                                         0,
1190865e5f61SKris Buschelman                                         0,
1191865e5f61SKris Buschelman                                         0,
1192865e5f61SKris Buschelman                                         0,
1193865e5f61SKris Buschelman                                         0,
1194*320f2790SHong Zhang                                 /* 89*/ MatMatMult_MPIDense_MPIDense,
1195*320f2790SHong Zhang                                         MatMatMultSymbolic_MPIDense_MPIDense,
1196fd4e9aacSBarry Smith                                         MatMatMultNumeric_MPIDense,
11972fbe02b9SBarry Smith                                         0,
1198ba337c44SJed Brown                                         0,
1199d519adbfSMatthew Knepley                                 /* 94*/ 0,
1200865e5f61SKris Buschelman                                         0,
1201865e5f61SKris Buschelman                                         0,
1202ba337c44SJed Brown                                         0,
1203ba337c44SJed Brown                                         0,
1204ba337c44SJed Brown                                 /* 99*/ 0,
1205ba337c44SJed Brown                                         0,
1206ba337c44SJed Brown                                         0,
1207ba337c44SJed Brown                                         MatConjugate_MPIDense,
1208ba337c44SJed Brown                                         0,
1209ba337c44SJed Brown                                 /*104*/ 0,
1210ba337c44SJed Brown                                         MatRealPart_MPIDense,
1211ba337c44SJed Brown                                         MatImaginaryPart_MPIDense,
121286d161a7SShri Abhyankar                                         0,
121386d161a7SShri Abhyankar                                         0,
121486d161a7SShri Abhyankar                                 /*109*/ 0,
121586d161a7SShri Abhyankar                                         0,
121686d161a7SShri Abhyankar                                         0,
121786d161a7SShri Abhyankar                                         0,
12183b49f96aSBarry Smith                                         MatMissingDiagonal_MPIDense,
121986d161a7SShri Abhyankar                                 /*114*/ 0,
122086d161a7SShri Abhyankar                                         0,
122186d161a7SShri Abhyankar                                         0,
122286d161a7SShri Abhyankar                                         0,
122386d161a7SShri Abhyankar                                         0,
122486d161a7SShri Abhyankar                                 /*119*/ 0,
122586d161a7SShri Abhyankar                                         0,
122686d161a7SShri Abhyankar                                         0,
12270716a85fSBarry Smith                                         0,
12280716a85fSBarry Smith                                         0,
12290716a85fSBarry Smith                                 /*124*/ 0,
12303964eb88SJed Brown                                         MatGetColumnNorms_MPIDense,
12313964eb88SJed Brown                                         0,
12323964eb88SJed Brown                                         0,
12333964eb88SJed Brown                                         0,
12343964eb88SJed Brown                                 /*129*/ 0,
1235cb20be35SHong Zhang                                         MatTransposeMatMult_MPIDense_MPIDense,
1236cb20be35SHong Zhang                                         MatTransposeMatMultSymbolic_MPIDense_MPIDense,
1237cb20be35SHong Zhang                                         MatTransposeMatMultNumeric_MPIDense_MPIDense,
12383964eb88SJed Brown                                         0,
12393964eb88SJed Brown                                 /*134*/ 0,
12403964eb88SJed Brown                                         0,
12413964eb88SJed Brown                                         0,
12423964eb88SJed Brown                                         0,
12433964eb88SJed Brown                                         0,
12443964eb88SJed Brown                                 /*139*/ 0,
1245f9426fe0SMark Adams                                         0,
12463964eb88SJed Brown                                         0
1247ba337c44SJed Brown };
12488965ea79SLois Curfman McInnes 
12494a2ae208SSatish Balay #undef __FUNCT__
1250a23d5eceSKris Buschelman #define __FUNCT__ "MatMPIDenseSetPreallocation_MPIDense"
12517087cfbeSBarry Smith PetscErrorCode  MatMPIDenseSetPreallocation_MPIDense(Mat mat,PetscScalar *data)
1252a23d5eceSKris Buschelman {
1253a23d5eceSKris Buschelman   Mat_MPIDense   *a;
1254dfbe8321SBarry Smith   PetscErrorCode ierr;
1255a23d5eceSKris Buschelman 
1256a23d5eceSKris Buschelman   PetscFunctionBegin;
1257a23d5eceSKris Buschelman   mat->preallocated = PETSC_TRUE;
1258a23d5eceSKris Buschelman   /* Note:  For now, when data is specified above, this assumes the user correctly
1259a23d5eceSKris Buschelman    allocates the local dense storage space.  We should add error checking. */
1260a23d5eceSKris Buschelman 
1261a23d5eceSKris Buschelman   a       = (Mat_MPIDense*)mat->data;
126234ef9618SShri Abhyankar   ierr    = PetscLayoutSetUp(mat->rmap);CHKERRQ(ierr);
126334ef9618SShri Abhyankar   ierr    = PetscLayoutSetUp(mat->cmap);CHKERRQ(ierr);
126434ef9618SShri Abhyankar   a->nvec = mat->cmap->n;
126534ef9618SShri Abhyankar 
1266f69a0ea3SMatthew Knepley   ierr = MatCreate(PETSC_COMM_SELF,&a->A);CHKERRQ(ierr);
1267d0f46423SBarry Smith   ierr = MatSetSizes(a->A,mat->rmap->n,mat->cmap->N,mat->rmap->n,mat->cmap->N);CHKERRQ(ierr);
12685c5985e7SKris Buschelman   ierr = MatSetType(a->A,MATSEQDENSE);CHKERRQ(ierr);
12695c5985e7SKris Buschelman   ierr = MatSeqDenseSetPreallocation(a->A,data);CHKERRQ(ierr);
12703bb1ff40SBarry Smith   ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A);CHKERRQ(ierr);
1271a23d5eceSKris Buschelman   PetscFunctionReturn(0);
1272a23d5eceSKris Buschelman }
1273a23d5eceSKris Buschelman 
127465b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
1275a23d5eceSKris Buschelman #undef __FUNCT__
12768baccfbdSHong Zhang #define __FUNCT__ "MatConvert_MPIDense_Elemental"
12778baccfbdSHong Zhang PETSC_EXTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
12788baccfbdSHong Zhang {
12798ea901baSHong Zhang   Mat            mat_elemental;
12808ea901baSHong Zhang   PetscErrorCode ierr;
128165b80a83SHong Zhang   PetscScalar    *array,*v_rowwise;
12828ea901baSHong Zhang   PetscInt       m=A->rmap->n,N=A->cmap->N,rstart=A->rmap->rstart,i,j,k,*rows,*cols;
12838ea901baSHong Zhang 
12848baccfbdSHong Zhang   PetscFunctionBegin;
128565b80a83SHong Zhang   ierr = PetscMalloc3(m*N,&v_rowwise,m,&rows,N,&cols);CHKERRQ(ierr);
12868ea901baSHong Zhang   ierr = MatDenseGetArray(A,&array);CHKERRQ(ierr);
128765b80a83SHong Zhang   /* convert column-wise array into row-wise v_rowwise, see MatSetValues_Elemental() */
12888ea901baSHong Zhang   k = 0;
12898ea901baSHong Zhang   for (j=0; j<N; j++) {
12908ea901baSHong Zhang     cols[j] = j;
12918ea901baSHong Zhang     for (i=0; i<m; i++) {
129265b80a83SHong Zhang       v_rowwise[i*N+j] = array[k++];
12938ea901baSHong Zhang     }
12948ea901baSHong Zhang   }
12958ea901baSHong Zhang   for (i=0; i<m; i++) {
12968ea901baSHong Zhang     rows[i] = rstart + i;
12978ea901baSHong Zhang   }
12988ea901baSHong Zhang   ierr = MatDenseRestoreArray(A,&array);CHKERRQ(ierr);
12998ea901baSHong Zhang 
13008ea901baSHong Zhang   ierr = MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental);CHKERRQ(ierr);
13018ea901baSHong Zhang   ierr = MatSetSizes(mat_elemental,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
13028ea901baSHong Zhang   ierr = MatSetType(mat_elemental,MATELEMENTAL);CHKERRQ(ierr);
13038ea901baSHong Zhang   ierr = MatSetUp(mat_elemental);CHKERRQ(ierr);
13048ea901baSHong Zhang 
13058ea901baSHong Zhang   /* PETSc-Elemental interaface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */
130665b80a83SHong Zhang   ierr = MatSetValues(mat_elemental,m,rows,N,cols,v_rowwise,ADD_VALUES);CHKERRQ(ierr);
13078ea901baSHong Zhang   ierr = MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
13088ea901baSHong Zhang   ierr = MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
130965b80a83SHong Zhang   ierr = PetscFree3(v_rowwise,rows,cols);CHKERRQ(ierr);
13108ea901baSHong Zhang 
13118ea901baSHong Zhang   if (reuse == MAT_REUSE_MATRIX) {
131228be2f97SBarry Smith     ierr = MatHeaderReplace(A,&mat_elemental);CHKERRQ(ierr);
13138ea901baSHong Zhang   } else {
13148ea901baSHong Zhang     *newmat = mat_elemental;
13158ea901baSHong Zhang   }
13168baccfbdSHong Zhang   PetscFunctionReturn(0);
13178baccfbdSHong Zhang }
131865b80a83SHong Zhang #endif
13198baccfbdSHong Zhang 
13208baccfbdSHong Zhang #undef __FUNCT__
13214a2ae208SSatish Balay #define __FUNCT__ "MatCreate_MPIDense"
13228cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreate_MPIDense(Mat mat)
1323273d9f13SBarry Smith {
1324273d9f13SBarry Smith   Mat_MPIDense   *a;
1325dfbe8321SBarry Smith   PetscErrorCode ierr;
1326273d9f13SBarry Smith 
1327273d9f13SBarry Smith   PetscFunctionBegin;
1328b00a9115SJed Brown   ierr      = PetscNewLog(mat,&a);CHKERRQ(ierr);
1329b0a32e0cSBarry Smith   mat->data = (void*)a;
1330273d9f13SBarry Smith   ierr      = PetscMemcpy(mat->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1331273d9f13SBarry Smith 
1332273d9f13SBarry Smith   mat->insertmode = NOT_SET_VALUES;
1333ce94432eSBarry Smith   ierr            = MPI_Comm_rank(PetscObjectComm((PetscObject)mat),&a->rank);CHKERRQ(ierr);
1334ce94432eSBarry Smith   ierr            = MPI_Comm_size(PetscObjectComm((PetscObject)mat),&a->size);CHKERRQ(ierr);
1335273d9f13SBarry Smith 
1336273d9f13SBarry Smith   /* build cache for off array entries formed */
1337273d9f13SBarry Smith   a->donotstash = PETSC_FALSE;
13382205254eSKarl Rupp 
1339ce94432eSBarry Smith   ierr = MatStashCreate_Private(PetscObjectComm((PetscObject)mat),1,&mat->stash);CHKERRQ(ierr);
1340273d9f13SBarry Smith 
1341273d9f13SBarry Smith   /* stuff used for matrix vector multiply */
1342273d9f13SBarry Smith   a->lvec        = 0;
1343273d9f13SBarry Smith   a->Mvctx       = 0;
1344273d9f13SBarry Smith   a->roworiented = PETSC_TRUE;
1345273d9f13SBarry Smith 
1346bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",MatDenseGetArray_MPIDense);CHKERRQ(ierr);
1347bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",MatDenseRestoreArray_MPIDense);CHKERRQ(ierr);
13488baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
13498baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",MatConvert_MPIDense_Elemental);CHKERRQ(ierr);
13508baccfbdSHong Zhang #endif
1351bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatGetDiagonalBlock_C",MatGetDiagonalBlock_MPIDense);CHKERRQ(ierr);
1352bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",MatMPIDenseSetPreallocation_MPIDense);CHKERRQ(ierr);
1353bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMatMult_mpiaij_mpidense_C",MatMatMult_MPIAIJ_MPIDense);CHKERRQ(ierr);
1354bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMatMultSymbolic_mpiaij_mpidense_C",MatMatMultSymbolic_MPIAIJ_MPIDense);CHKERRQ(ierr);
1355bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMatMultNumeric_mpiaij_mpidense_C",MatMatMultNumeric_MPIAIJ_MPIDense);CHKERRQ(ierr);
13568949adfdSHong Zhang 
13578949adfdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatTransposeMatMult_mpiaij_mpidense_C",MatTransposeMatMult_MPIAIJ_MPIDense);CHKERRQ(ierr);
13588949adfdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatTransposeMatMultSymbolic_mpiaij_mpidense_C",MatTransposeMatMultSymbolic_MPIAIJ_MPIDense);CHKERRQ(ierr);
13598949adfdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatTransposeMatMultNumeric_mpiaij_mpidense_C",MatTransposeMatMultNumeric_MPIAIJ_MPIDense);CHKERRQ(ierr);
136038aed534SBarry Smith   ierr = PetscObjectChangeTypeName((PetscObject)mat,MATMPIDENSE);CHKERRQ(ierr);
1361273d9f13SBarry Smith   PetscFunctionReturn(0);
1362273d9f13SBarry Smith }
1363273d9f13SBarry Smith 
1364209238afSKris Buschelman /*MC
1365002d173eSKris Buschelman    MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices.
1366209238afSKris Buschelman 
1367209238afSKris Buschelman    This matrix type is identical to MATSEQDENSE when constructed with a single process communicator,
1368209238afSKris Buschelman    and MATMPIDENSE otherwise.
1369209238afSKris Buschelman 
1370209238afSKris Buschelman    Options Database Keys:
1371209238afSKris Buschelman . -mat_type dense - sets the matrix type to "dense" during a call to MatSetFromOptions()
1372209238afSKris Buschelman 
1373209238afSKris Buschelman   Level: beginner
1374209238afSKris Buschelman 
137501b82886SBarry Smith 
1376209238afSKris Buschelman .seealso: MatCreateMPIDense,MATSEQDENSE,MATMPIDENSE
1377209238afSKris Buschelman M*/
1378209238afSKris Buschelman 
13794a2ae208SSatish Balay #undef __FUNCT__
13804a2ae208SSatish Balay #define __FUNCT__ "MatMPIDenseSetPreallocation"
1381273d9f13SBarry Smith /*@C
1382273d9f13SBarry Smith    MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries
1383273d9f13SBarry Smith 
1384273d9f13SBarry Smith    Not collective
1385273d9f13SBarry Smith 
1386273d9f13SBarry Smith    Input Parameters:
13871c4f3114SJed Brown .  B - the matrix
13880298fd71SBarry Smith -  data - optional location of matrix data.  Set data=NULL for PETSc
1389273d9f13SBarry Smith    to control all matrix memory allocation.
1390273d9f13SBarry Smith 
1391273d9f13SBarry Smith    Notes:
1392273d9f13SBarry Smith    The dense format is fully compatible with standard Fortran 77
1393273d9f13SBarry Smith    storage by columns.
1394273d9f13SBarry Smith 
1395273d9f13SBarry Smith    The data input variable is intended primarily for Fortran programmers
1396273d9f13SBarry Smith    who wish to allocate their own matrix memory space.  Most users should
13970298fd71SBarry Smith    set data=NULL.
1398273d9f13SBarry Smith 
1399273d9f13SBarry Smith    Level: intermediate
1400273d9f13SBarry Smith 
1401273d9f13SBarry Smith .keywords: matrix,dense, parallel
1402273d9f13SBarry Smith 
1403273d9f13SBarry Smith .seealso: MatCreate(), MatCreateSeqDense(), MatSetValues()
1404273d9f13SBarry Smith @*/
14051c4f3114SJed Brown PetscErrorCode  MatMPIDenseSetPreallocation(Mat B,PetscScalar *data)
1406273d9f13SBarry Smith {
14074ac538c5SBarry Smith   PetscErrorCode ierr;
1408273d9f13SBarry Smith 
1409273d9f13SBarry Smith   PetscFunctionBegin;
14101c4f3114SJed Brown   ierr = PetscTryMethod(B,"MatMPIDenseSetPreallocation_C",(Mat,PetscScalar*),(B,data));CHKERRQ(ierr);
1411273d9f13SBarry Smith   PetscFunctionReturn(0);
1412273d9f13SBarry Smith }
1413273d9f13SBarry Smith 
14144a2ae208SSatish Balay #undef __FUNCT__
141569b1f4b7SBarry Smith #define __FUNCT__ "MatCreateDense"
14168965ea79SLois Curfman McInnes /*@C
141769b1f4b7SBarry Smith    MatCreateDense - Creates a parallel matrix in dense format.
14188965ea79SLois Curfman McInnes 
1419db81eaa0SLois Curfman McInnes    Collective on MPI_Comm
1420db81eaa0SLois Curfman McInnes 
14218965ea79SLois Curfman McInnes    Input Parameters:
1422db81eaa0SLois Curfman McInnes +  comm - MPI communicator
14238965ea79SLois Curfman McInnes .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
1424db81eaa0SLois Curfman McInnes .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
14258965ea79SLois Curfman McInnes .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
1426db81eaa0SLois Curfman McInnes .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
14276cfe35ddSJose E. Roman -  data - optional location of matrix data.  Set data=NULL (PETSC_NULL_SCALAR for Fortran users) for PETSc
1428dfc5480cSLois Curfman McInnes    to control all matrix memory allocation.
14298965ea79SLois Curfman McInnes 
14308965ea79SLois Curfman McInnes    Output Parameter:
1431477f1c0bSLois Curfman McInnes .  A - the matrix
14328965ea79SLois Curfman McInnes 
1433b259b22eSLois Curfman McInnes    Notes:
143439ddd567SLois Curfman McInnes    The dense format is fully compatible with standard Fortran 77
143539ddd567SLois Curfman McInnes    storage by columns.
14368965ea79SLois Curfman McInnes 
143718f449edSLois Curfman McInnes    The data input variable is intended primarily for Fortran programmers
143818f449edSLois Curfman McInnes    who wish to allocate their own matrix memory space.  Most users should
14396cfe35ddSJose E. Roman    set data=NULL (PETSC_NULL_SCALAR for Fortran users).
144018f449edSLois Curfman McInnes 
14418965ea79SLois Curfman McInnes    The user MUST specify either the local or global matrix dimensions
14428965ea79SLois Curfman McInnes    (possibly both).
14438965ea79SLois Curfman McInnes 
1444027ccd11SLois Curfman McInnes    Level: intermediate
1445027ccd11SLois Curfman McInnes 
144639ddd567SLois Curfman McInnes .keywords: matrix,dense, parallel
14478965ea79SLois Curfman McInnes 
144839ddd567SLois Curfman McInnes .seealso: MatCreate(), MatCreateSeqDense(), MatSetValues()
14498965ea79SLois Curfman McInnes @*/
145069b1f4b7SBarry Smith PetscErrorCode  MatCreateDense(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
14518965ea79SLois Curfman McInnes {
14526849ba73SBarry Smith   PetscErrorCode ierr;
145313f74950SBarry Smith   PetscMPIInt    size;
14548965ea79SLois Curfman McInnes 
14553a40ed3dSBarry Smith   PetscFunctionBegin;
1456f69a0ea3SMatthew Knepley   ierr = MatCreate(comm,A);CHKERRQ(ierr);
1457f69a0ea3SMatthew Knepley   ierr = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr);
1458273d9f13SBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
1459273d9f13SBarry Smith   if (size > 1) {
1460273d9f13SBarry Smith     ierr = MatSetType(*A,MATMPIDENSE);CHKERRQ(ierr);
1461273d9f13SBarry Smith     ierr = MatMPIDenseSetPreallocation(*A,data);CHKERRQ(ierr);
14626cfe35ddSJose E. Roman     if (data) {  /* user provided data array, so no need to assemble */
14636cfe35ddSJose E. Roman       ierr = MatSetUpMultiply_MPIDense(*A);CHKERRQ(ierr);
14646cfe35ddSJose E. Roman       (*A)->assembled = PETSC_TRUE;
14656cfe35ddSJose E. Roman     }
1466273d9f13SBarry Smith   } else {
1467273d9f13SBarry Smith     ierr = MatSetType(*A,MATSEQDENSE);CHKERRQ(ierr);
1468273d9f13SBarry Smith     ierr = MatSeqDenseSetPreallocation(*A,data);CHKERRQ(ierr);
14698c469469SLois Curfman McInnes   }
14703a40ed3dSBarry Smith   PetscFunctionReturn(0);
14718965ea79SLois Curfman McInnes }
14728965ea79SLois Curfman McInnes 
14734a2ae208SSatish Balay #undef __FUNCT__
14744a2ae208SSatish Balay #define __FUNCT__ "MatDuplicate_MPIDense"
14756849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat A,MatDuplicateOption cpvalues,Mat *newmat)
14768965ea79SLois Curfman McInnes {
14778965ea79SLois Curfman McInnes   Mat            mat;
14783501a2bdSLois Curfman McInnes   Mat_MPIDense   *a,*oldmat = (Mat_MPIDense*)A->data;
1479dfbe8321SBarry Smith   PetscErrorCode ierr;
14808965ea79SLois Curfman McInnes 
14813a40ed3dSBarry Smith   PetscFunctionBegin;
14828965ea79SLois Curfman McInnes   *newmat = 0;
1483ce94432eSBarry Smith   ierr    = MatCreate(PetscObjectComm((PetscObject)A),&mat);CHKERRQ(ierr);
1484d0f46423SBarry Smith   ierr    = MatSetSizes(mat,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
14857adad957SLisandro Dalcin   ierr    = MatSetType(mat,((PetscObject)A)->type_name);CHKERRQ(ierr);
1486834f8fabSBarry Smith   a       = (Mat_MPIDense*)mat->data;
1487e04c1aa4SHong Zhang   ierr    = PetscMemcpy(mat->ops,A->ops,sizeof(struct _MatOps));CHKERRQ(ierr);
14885aa7edbeSHong Zhang 
1489d5f3da31SBarry Smith   mat->factortype   = A->factortype;
1490c456f294SBarry Smith   mat->assembled    = PETSC_TRUE;
1491273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
14928965ea79SLois Curfman McInnes 
14938965ea79SLois Curfman McInnes   a->size         = oldmat->size;
14948965ea79SLois Curfman McInnes   a->rank         = oldmat->rank;
1495e0fa3b82SLois Curfman McInnes   mat->insertmode = NOT_SET_VALUES;
1496b9b97703SBarry Smith   a->nvec         = oldmat->nvec;
14973782ba37SSatish Balay   a->donotstash   = oldmat->donotstash;
1498e04c1aa4SHong Zhang 
14991e1e43feSBarry Smith   ierr = PetscLayoutReference(A->rmap,&mat->rmap);CHKERRQ(ierr);
15001e1e43feSBarry Smith   ierr = PetscLayoutReference(A->cmap,&mat->cmap);CHKERRQ(ierr);
15018965ea79SLois Curfman McInnes 
1502329f5518SBarry Smith   ierr = MatSetUpMultiply_MPIDense(mat);CHKERRQ(ierr);
15035609ef8eSBarry Smith   ierr = MatDuplicate(oldmat->A,cpvalues,&a->A);CHKERRQ(ierr);
15043bb1ff40SBarry Smith   ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A);CHKERRQ(ierr);
150501b82886SBarry Smith 
15068965ea79SLois Curfman McInnes   *newmat = mat;
15073a40ed3dSBarry Smith   PetscFunctionReturn(0);
15088965ea79SLois Curfman McInnes }
15098965ea79SLois Curfman McInnes 
15104a2ae208SSatish Balay #undef __FUNCT__
15115bba2384SShri Abhyankar #define __FUNCT__ "MatLoad_MPIDense_DenseInFile"
15129d36ed5fSBarry Smith PetscErrorCode MatLoad_MPIDense_DenseInFile(MPI_Comm comm,PetscInt fd,PetscInt M,PetscInt N,Mat newmat)
151386d161a7SShri Abhyankar {
151486d161a7SShri Abhyankar   PetscErrorCode ierr;
151586d161a7SShri Abhyankar   PetscMPIInt    rank,size;
151674c13d95SBarry Smith   const PetscInt *rowners;
151774c13d95SBarry Smith   PetscInt       i,m,n,nz,j,mMax;
151886d161a7SShri Abhyankar   PetscScalar    *array,*vals,*vals_ptr;
15199d36ed5fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)newmat->data;
152086d161a7SShri Abhyankar 
152186d161a7SShri Abhyankar   PetscFunctionBegin;
152286d161a7SShri Abhyankar   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
152386d161a7SShri Abhyankar   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
152486d161a7SShri Abhyankar 
152574c13d95SBarry Smith   /* determine ownership of rows and columns */
152674c13d95SBarry Smith   m = (newmat->rmap->n < 0) ? PETSC_DECIDE : newmat->rmap->n;
152774c13d95SBarry Smith   n = (newmat->cmap->n < 0) ? PETSC_DECIDE : newmat->cmap->n;
152886d161a7SShri Abhyankar 
152974c13d95SBarry Smith   ierr = MatSetSizes(newmat,m,n,M,N);CHKERRQ(ierr);
15309d36ed5fSBarry Smith   if (!a->A || !((Mat_SeqDense*)(a->A->data))->user_alloc) {
15310298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(newmat,NULL);CHKERRQ(ierr);
15329d36ed5fSBarry Smith   }
15338c778c55SBarry Smith   ierr = MatDenseGetArray(newmat,&array);CHKERRQ(ierr);
153449467e7dSBarry Smith   ierr = MatGetLocalSize(newmat,&m,NULL);CHKERRQ(ierr);
153574c13d95SBarry Smith   ierr = MatGetOwnershipRanges(newmat,&rowners);CHKERRQ(ierr);
1536396e826eSBarry Smith   ierr = MPI_Reduce(&m,&mMax,1,MPIU_INT,MPI_MAX,0,comm);CHKERRQ(ierr);
153786d161a7SShri Abhyankar   if (!rank) {
15389d36ed5fSBarry Smith     ierr = PetscMalloc1(mMax*N,&vals);CHKERRQ(ierr);
153986d161a7SShri Abhyankar 
154086d161a7SShri Abhyankar     /* read in my part of the matrix numerical values  */
154186d161a7SShri Abhyankar     ierr = PetscBinaryRead(fd,vals,m*N,PETSC_SCALAR);CHKERRQ(ierr);
154286d161a7SShri Abhyankar 
154386d161a7SShri Abhyankar     /* insert into matrix-by row (this is why cannot directly read into array */
154486d161a7SShri Abhyankar     vals_ptr = vals;
154586d161a7SShri Abhyankar     for (i=0; i<m; i++) {
154686d161a7SShri Abhyankar       for (j=0; j<N; j++) {
154786d161a7SShri Abhyankar         array[i + j*m] = *vals_ptr++;
154886d161a7SShri Abhyankar       }
154986d161a7SShri Abhyankar     }
155086d161a7SShri Abhyankar 
155186d161a7SShri Abhyankar     /* read in other processors and ship out */
155286d161a7SShri Abhyankar     for (i=1; i<size; i++) {
155386d161a7SShri Abhyankar       nz   = (rowners[i+1] - rowners[i])*N;
155486d161a7SShri Abhyankar       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
1555a25532f0SBarry Smith       ierr = MPIULong_Send(vals,nz,MPIU_SCALAR,i,((PetscObject)(newmat))->tag,comm);CHKERRQ(ierr);
155686d161a7SShri Abhyankar     }
155786d161a7SShri Abhyankar   } else {
155886d161a7SShri Abhyankar     /* receive numeric values */
1559785e854fSJed Brown     ierr = PetscMalloc1(m*N,&vals);CHKERRQ(ierr);
156086d161a7SShri Abhyankar 
156186d161a7SShri Abhyankar     /* receive message of values*/
1562a25532f0SBarry Smith     ierr = MPIULong_Recv(vals,m*N,MPIU_SCALAR,0,((PetscObject)(newmat))->tag,comm);CHKERRQ(ierr);
156386d161a7SShri Abhyankar 
156486d161a7SShri Abhyankar     /* insert into matrix-by row (this is why cannot directly read into array */
156586d161a7SShri Abhyankar     vals_ptr = vals;
156686d161a7SShri Abhyankar     for (i=0; i<m; i++) {
156786d161a7SShri Abhyankar       for (j=0; j<N; j++) {
156886d161a7SShri Abhyankar         array[i + j*m] = *vals_ptr++;
156986d161a7SShri Abhyankar       }
157086d161a7SShri Abhyankar     }
157186d161a7SShri Abhyankar   }
15728c778c55SBarry Smith   ierr = MatDenseRestoreArray(newmat,&array);CHKERRQ(ierr);
157386d161a7SShri Abhyankar   ierr = PetscFree(vals);CHKERRQ(ierr);
157486d161a7SShri Abhyankar   ierr = MatAssemblyBegin(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
157586d161a7SShri Abhyankar   ierr = MatAssemblyEnd(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
157686d161a7SShri Abhyankar   PetscFunctionReturn(0);
157786d161a7SShri Abhyankar }
157886d161a7SShri Abhyankar 
157986d161a7SShri Abhyankar #undef __FUNCT__
15805bba2384SShri Abhyankar #define __FUNCT__ "MatLoad_MPIDense"
1581112444f4SShri Abhyankar PetscErrorCode MatLoad_MPIDense(Mat newmat,PetscViewer viewer)
158286d161a7SShri Abhyankar {
1583dfdea288SBarry Smith   Mat_MPIDense   *a;
158486d161a7SShri Abhyankar   PetscScalar    *vals,*svals;
1585ce94432eSBarry Smith   MPI_Comm       comm;
158686d161a7SShri Abhyankar   MPI_Status     status;
158749467e7dSBarry Smith   PetscMPIInt    rank,size,tag = ((PetscObject)viewer)->tag,*rowners,*sndcounts,m,n,maxnz;
158886d161a7SShri Abhyankar   PetscInt       header[4],*rowlengths = 0,M,N,*cols;
158949467e7dSBarry Smith   PetscInt       *ourlens,*procsnz = 0,jj,*mycols,*smycols;
15909d36ed5fSBarry Smith   PetscInt       i,nz,j,rstart,rend;
159186d161a7SShri Abhyankar   int            fd;
159286d161a7SShri Abhyankar   PetscErrorCode ierr;
159386d161a7SShri Abhyankar 
159486d161a7SShri Abhyankar   PetscFunctionBegin;
1595c98fd787SBarry Smith   /* force binary viewer to load .info file if it has not yet done so */
1596c98fd787SBarry Smith   ierr = PetscViewerSetUp(viewer);CHKERRQ(ierr);
1597ce94432eSBarry Smith   ierr = PetscObjectGetComm((PetscObject)viewer,&comm);CHKERRQ(ierr);
159886d161a7SShri Abhyankar   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
159986d161a7SShri Abhyankar   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
160086d161a7SShri Abhyankar   ierr = PetscViewerBinaryGetDescriptor(viewer,&fd);CHKERRQ(ierr);
16015872f025SBarry Smith   if (!rank) {
160286d161a7SShri Abhyankar     ierr = PetscBinaryRead(fd,(char*)header,4,PETSC_INT);CHKERRQ(ierr);
160386d161a7SShri Abhyankar     if (header[0] != MAT_FILE_CLASSID) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_FILE_UNEXPECTED,"not matrix object");
160486d161a7SShri Abhyankar   }
160586d161a7SShri Abhyankar   ierr = MPI_Bcast(header+1,3,MPIU_INT,0,comm);CHKERRQ(ierr);
160686d161a7SShri Abhyankar   M    = header[1]; N = header[2]; nz = header[3];
160786d161a7SShri Abhyankar 
160886d161a7SShri Abhyankar   /* If global rows/cols are set to PETSC_DECIDE, set it to the sizes given in the file */
16099d36ed5fSBarry Smith   if (newmat->rmap->N < 0) newmat->rmap->N = M;
16109d36ed5fSBarry Smith   if (newmat->cmap->N < 0) newmat->cmap->N = N;
161186d161a7SShri Abhyankar 
16129d36ed5fSBarry Smith   if (newmat->rmap->N != M) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_FILE_UNEXPECTED, "Inconsistent # of rows:Matrix in file has (%D) and input matrix has (%D)",M,newmat->rmap->N);
16139d36ed5fSBarry Smith   if (newmat->cmap->N != N) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_FILE_UNEXPECTED, "Inconsistent # of cols:Matrix in file has (%D) and input matrix has (%D)",N,newmat->cmap->N);
161486d161a7SShri Abhyankar 
161586d161a7SShri Abhyankar   /*
161686d161a7SShri Abhyankar        Handle case where matrix is stored on disk as a dense matrix
161786d161a7SShri Abhyankar   */
161886d161a7SShri Abhyankar   if (nz == MATRIX_BINARY_FORMAT_DENSE) {
16199d36ed5fSBarry Smith     ierr = MatLoad_MPIDense_DenseInFile(comm,fd,M,N,newmat);CHKERRQ(ierr);
162086d161a7SShri Abhyankar     PetscFunctionReturn(0);
162186d161a7SShri Abhyankar   }
162286d161a7SShri Abhyankar 
162386d161a7SShri Abhyankar   /* determine ownership of all rows */
16242205254eSKarl Rupp   if (newmat->rmap->n < 0) {
16252205254eSKarl Rupp     ierr = PetscMPIIntCast(M/size + ((M % size) > rank),&m);CHKERRQ(ierr);
16262205254eSKarl Rupp   } else {
16272205254eSKarl Rupp     ierr = PetscMPIIntCast(newmat->rmap->n,&m);CHKERRQ(ierr);
16282205254eSKarl Rupp   }
162949467e7dSBarry Smith   if (newmat->cmap->n < 0) {
163049467e7dSBarry Smith     n = PETSC_DECIDE;
163149467e7dSBarry Smith   } else {
163249467e7dSBarry Smith     ierr = PetscMPIIntCast(newmat->cmap->n,&n);CHKERRQ(ierr);
163349467e7dSBarry Smith   }
163449467e7dSBarry Smith 
1635854ce69bSBarry Smith   ierr       = PetscMalloc1(size+2,&rowners);CHKERRQ(ierr);
163686d161a7SShri Abhyankar   ierr       = MPI_Allgather(&m,1,MPI_INT,rowners+1,1,MPI_INT,comm);CHKERRQ(ierr);
163786d161a7SShri Abhyankar   rowners[0] = 0;
163886d161a7SShri Abhyankar   for (i=2; i<=size; i++) {
163986d161a7SShri Abhyankar     rowners[i] += rowners[i-1];
164086d161a7SShri Abhyankar   }
164186d161a7SShri Abhyankar   rstart = rowners[rank];
164286d161a7SShri Abhyankar   rend   = rowners[rank+1];
164386d161a7SShri Abhyankar 
164486d161a7SShri Abhyankar   /* distribute row lengths to all processors */
164549467e7dSBarry Smith   ierr = PetscMalloc1(rend-rstart,&ourlens);CHKERRQ(ierr);
164686d161a7SShri Abhyankar   if (!rank) {
1647785e854fSJed Brown     ierr = PetscMalloc1(M,&rowlengths);CHKERRQ(ierr);
164886d161a7SShri Abhyankar     ierr = PetscBinaryRead(fd,rowlengths,M,PETSC_INT);CHKERRQ(ierr);
1649785e854fSJed Brown     ierr = PetscMalloc1(size,&sndcounts);CHKERRQ(ierr);
165086d161a7SShri Abhyankar     for (i=0; i<size; i++) sndcounts[i] = rowners[i+1] - rowners[i];
165186d161a7SShri Abhyankar     ierr = MPI_Scatterv(rowlengths,sndcounts,rowners,MPIU_INT,ourlens,rend-rstart,MPIU_INT,0,comm);CHKERRQ(ierr);
165286d161a7SShri Abhyankar     ierr = PetscFree(sndcounts);CHKERRQ(ierr);
165386d161a7SShri Abhyankar   } else {
165486d161a7SShri Abhyankar     ierr = MPI_Scatterv(0,0,0,MPIU_INT,ourlens,rend-rstart,MPIU_INT,0,comm);CHKERRQ(ierr);
165586d161a7SShri Abhyankar   }
165686d161a7SShri Abhyankar 
165786d161a7SShri Abhyankar   if (!rank) {
165886d161a7SShri Abhyankar     /* calculate the number of nonzeros on each processor */
1659785e854fSJed Brown     ierr = PetscMalloc1(size,&procsnz);CHKERRQ(ierr);
166086d161a7SShri Abhyankar     ierr = PetscMemzero(procsnz,size*sizeof(PetscInt));CHKERRQ(ierr);
166186d161a7SShri Abhyankar     for (i=0; i<size; i++) {
166286d161a7SShri Abhyankar       for (j=rowners[i]; j< rowners[i+1]; j++) {
166386d161a7SShri Abhyankar         procsnz[i] += rowlengths[j];
166486d161a7SShri Abhyankar       }
166586d161a7SShri Abhyankar     }
166686d161a7SShri Abhyankar     ierr = PetscFree(rowlengths);CHKERRQ(ierr);
166786d161a7SShri Abhyankar 
166886d161a7SShri Abhyankar     /* determine max buffer needed and allocate it */
166986d161a7SShri Abhyankar     maxnz = 0;
167086d161a7SShri Abhyankar     for (i=0; i<size; i++) {
167186d161a7SShri Abhyankar       maxnz = PetscMax(maxnz,procsnz[i]);
167286d161a7SShri Abhyankar     }
1673785e854fSJed Brown     ierr = PetscMalloc1(maxnz,&cols);CHKERRQ(ierr);
167486d161a7SShri Abhyankar 
167586d161a7SShri Abhyankar     /* read in my part of the matrix column indices  */
167686d161a7SShri Abhyankar     nz   = procsnz[0];
1677785e854fSJed Brown     ierr = PetscMalloc1(nz,&mycols);CHKERRQ(ierr);
167886d161a7SShri Abhyankar     ierr = PetscBinaryRead(fd,mycols,nz,PETSC_INT);CHKERRQ(ierr);
167986d161a7SShri Abhyankar 
168086d161a7SShri Abhyankar     /* read in every one elses and ship off */
168186d161a7SShri Abhyankar     for (i=1; i<size; i++) {
168286d161a7SShri Abhyankar       nz   = procsnz[i];
168386d161a7SShri Abhyankar       ierr = PetscBinaryRead(fd,cols,nz,PETSC_INT);CHKERRQ(ierr);
168486d161a7SShri Abhyankar       ierr = MPI_Send(cols,nz,MPIU_INT,i,tag,comm);CHKERRQ(ierr);
168586d161a7SShri Abhyankar     }
168686d161a7SShri Abhyankar     ierr = PetscFree(cols);CHKERRQ(ierr);
168786d161a7SShri Abhyankar   } else {
168886d161a7SShri Abhyankar     /* determine buffer space needed for message */
168986d161a7SShri Abhyankar     nz = 0;
169086d161a7SShri Abhyankar     for (i=0; i<m; i++) {
169186d161a7SShri Abhyankar       nz += ourlens[i];
169286d161a7SShri Abhyankar     }
1693854ce69bSBarry Smith     ierr = PetscMalloc1(nz+1,&mycols);CHKERRQ(ierr);
169486d161a7SShri Abhyankar 
169586d161a7SShri Abhyankar     /* receive message of column indices*/
169686d161a7SShri Abhyankar     ierr = MPI_Recv(mycols,nz,MPIU_INT,0,tag,comm,&status);CHKERRQ(ierr);
169786d161a7SShri Abhyankar     ierr = MPI_Get_count(&status,MPIU_INT,&maxnz);CHKERRQ(ierr);
169886d161a7SShri Abhyankar     if (maxnz != nz) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
169986d161a7SShri Abhyankar   }
170086d161a7SShri Abhyankar 
170149467e7dSBarry Smith   ierr = MatSetSizes(newmat,m,n,M,N);CHKERRQ(ierr);
1702dfdea288SBarry Smith   a = (Mat_MPIDense*)newmat->data;
17032e3566b0SBarry Smith   if (!a->A || !((Mat_SeqDense*)(a->A->data))->user_alloc) {
17040298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(newmat,NULL);CHKERRQ(ierr);
1705dfdea288SBarry Smith   }
170686d161a7SShri Abhyankar 
170786d161a7SShri Abhyankar   if (!rank) {
1708785e854fSJed Brown     ierr = PetscMalloc1(maxnz,&vals);CHKERRQ(ierr);
170986d161a7SShri Abhyankar 
171086d161a7SShri Abhyankar     /* read in my part of the matrix numerical values  */
171186d161a7SShri Abhyankar     nz   = procsnz[0];
171286d161a7SShri Abhyankar     ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
171386d161a7SShri Abhyankar 
171486d161a7SShri Abhyankar     /* insert into matrix */
171586d161a7SShri Abhyankar     jj      = rstart;
171686d161a7SShri Abhyankar     smycols = mycols;
171786d161a7SShri Abhyankar     svals   = vals;
171886d161a7SShri Abhyankar     for (i=0; i<m; i++) {
171986d161a7SShri Abhyankar       ierr     = MatSetValues(newmat,1,&jj,ourlens[i],smycols,svals,INSERT_VALUES);CHKERRQ(ierr);
172086d161a7SShri Abhyankar       smycols += ourlens[i];
172186d161a7SShri Abhyankar       svals   += ourlens[i];
172286d161a7SShri Abhyankar       jj++;
172386d161a7SShri Abhyankar     }
172486d161a7SShri Abhyankar 
172586d161a7SShri Abhyankar     /* read in other processors and ship out */
172686d161a7SShri Abhyankar     for (i=1; i<size; i++) {
172786d161a7SShri Abhyankar       nz   = procsnz[i];
172886d161a7SShri Abhyankar       ierr = PetscBinaryRead(fd,vals,nz,PETSC_SCALAR);CHKERRQ(ierr);
172986d161a7SShri Abhyankar       ierr = MPI_Send(vals,nz,MPIU_SCALAR,i,((PetscObject)newmat)->tag,comm);CHKERRQ(ierr);
173086d161a7SShri Abhyankar     }
173186d161a7SShri Abhyankar     ierr = PetscFree(procsnz);CHKERRQ(ierr);
173286d161a7SShri Abhyankar   } else {
173386d161a7SShri Abhyankar     /* receive numeric values */
1734854ce69bSBarry Smith     ierr = PetscMalloc1(nz+1,&vals);CHKERRQ(ierr);
173586d161a7SShri Abhyankar 
173686d161a7SShri Abhyankar     /* receive message of values*/
173786d161a7SShri Abhyankar     ierr = MPI_Recv(vals,nz,MPIU_SCALAR,0,((PetscObject)newmat)->tag,comm,&status);CHKERRQ(ierr);
173886d161a7SShri Abhyankar     ierr = MPI_Get_count(&status,MPIU_SCALAR,&maxnz);CHKERRQ(ierr);
173986d161a7SShri Abhyankar     if (maxnz != nz) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_FILE_UNEXPECTED,"something is wrong with file");
174086d161a7SShri Abhyankar 
174186d161a7SShri Abhyankar     /* insert into matrix */
174286d161a7SShri Abhyankar     jj      = rstart;
174386d161a7SShri Abhyankar     smycols = mycols;
174486d161a7SShri Abhyankar     svals   = vals;
174586d161a7SShri Abhyankar     for (i=0; i<m; i++) {
174686d161a7SShri Abhyankar       ierr     = MatSetValues(newmat,1,&jj,ourlens[i],smycols,svals,INSERT_VALUES);CHKERRQ(ierr);
174786d161a7SShri Abhyankar       smycols += ourlens[i];
174886d161a7SShri Abhyankar       svals   += ourlens[i];
174986d161a7SShri Abhyankar       jj++;
175086d161a7SShri Abhyankar     }
175186d161a7SShri Abhyankar   }
175249467e7dSBarry Smith   ierr = PetscFree(ourlens);CHKERRQ(ierr);
175386d161a7SShri Abhyankar   ierr = PetscFree(vals);CHKERRQ(ierr);
175486d161a7SShri Abhyankar   ierr = PetscFree(mycols);CHKERRQ(ierr);
175586d161a7SShri Abhyankar   ierr = PetscFree(rowners);CHKERRQ(ierr);
175686d161a7SShri Abhyankar 
175786d161a7SShri Abhyankar   ierr = MatAssemblyBegin(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
175886d161a7SShri Abhyankar   ierr = MatAssemblyEnd(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
175986d161a7SShri Abhyankar   PetscFunctionReturn(0);
176086d161a7SShri Abhyankar }
176186d161a7SShri Abhyankar 
176286d161a7SShri Abhyankar #undef __FUNCT__
17636e4ee0c6SHong Zhang #define __FUNCT__ "MatEqual_MPIDense"
1764ace3abfcSBarry Smith PetscErrorCode MatEqual_MPIDense(Mat A,Mat B,PetscBool  *flag)
17656e4ee0c6SHong Zhang {
17666e4ee0c6SHong Zhang   Mat_MPIDense   *matB = (Mat_MPIDense*)B->data,*matA = (Mat_MPIDense*)A->data;
17676e4ee0c6SHong Zhang   Mat            a,b;
1768ace3abfcSBarry Smith   PetscBool      flg;
17696e4ee0c6SHong Zhang   PetscErrorCode ierr;
177090ace30eSBarry Smith 
17716e4ee0c6SHong Zhang   PetscFunctionBegin;
17726e4ee0c6SHong Zhang   a    = matA->A;
17736e4ee0c6SHong Zhang   b    = matB->A;
17746e4ee0c6SHong Zhang   ierr = MatEqual(a,b,&flg);CHKERRQ(ierr);
1775ce94432eSBarry Smith   ierr = MPI_Allreduce(&flg,flag,1,MPIU_BOOL,MPI_LAND,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
17766e4ee0c6SHong Zhang   PetscFunctionReturn(0);
17776e4ee0c6SHong Zhang }
177890ace30eSBarry Smith 
1779cb20be35SHong Zhang #undef __FUNCT__
1780baa3c1c6SHong Zhang #define __FUNCT__ "MatDestroy_MatTransMatMult_MPIDense_MPIDense"
1781baa3c1c6SHong Zhang PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(Mat A)
1782baa3c1c6SHong Zhang {
1783baa3c1c6SHong Zhang   PetscErrorCode        ierr;
1784baa3c1c6SHong Zhang   Mat_MPIDense          *a = (Mat_MPIDense*)A->data;
1785baa3c1c6SHong Zhang   Mat_TransMatMultDense *atb = a->atbdense;
1786baa3c1c6SHong Zhang 
1787baa3c1c6SHong Zhang   PetscFunctionBegin;
1788c5ef1628SHong Zhang   ierr = PetscFree3(atb->sendbuf,atb->atbarray,atb->recvcounts);CHKERRQ(ierr);
1789baa3c1c6SHong Zhang   ierr = (atb->destroy)(A);CHKERRQ(ierr);
1790baa3c1c6SHong Zhang   ierr = PetscFree(atb);CHKERRQ(ierr);
1791baa3c1c6SHong Zhang   PetscFunctionReturn(0);
1792baa3c1c6SHong Zhang }
1793baa3c1c6SHong Zhang 
1794baa3c1c6SHong Zhang #undef __FUNCT__
1795cb20be35SHong Zhang #define __FUNCT__ "MatTransposeMatMultNumeric_MPIDense_MPIDense"
1796cb20be35SHong Zhang PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
1797cb20be35SHong Zhang {
1798baa3c1c6SHong Zhang   Mat_MPIDense   *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
1799660d5466SHong Zhang   Mat_SeqDense   *aseq=(Mat_SeqDense*)(a->A)->data, *bseq=(Mat_SeqDense*)(b->A)->data;
1800baa3c1c6SHong Zhang   Mat_TransMatMultDense *atb = c->atbdense;
1801cb20be35SHong Zhang   PetscErrorCode ierr;
1802cb20be35SHong Zhang   MPI_Comm       comm;
1803d5017740SHong Zhang   PetscMPIInt    rank,size,*recvcounts=atb->recvcounts;
1804c5ef1628SHong Zhang   PetscScalar    *carray,*atbarray=atb->atbarray,*sendbuf=atb->sendbuf;
1805d5017740SHong Zhang   PetscInt       i,cN=C->cmap->N,cM=C->rmap->N,proc,k,j;
1806660d5466SHong Zhang   PetscScalar    _DOne=1.0,_DZero=0.0;
1807adc7a786SHong Zhang   PetscBLASInt   am,an,bn,aN;
1808e68c0b26SHong Zhang   const PetscInt *ranges;
1809cb20be35SHong Zhang 
1810cb20be35SHong Zhang   PetscFunctionBegin;
1811cb20be35SHong Zhang   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
1812cb20be35SHong Zhang   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
1813cb20be35SHong Zhang   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
1814e68c0b26SHong Zhang 
1815c5ef1628SHong Zhang   /* compute atbarray = aseq^T * bseq */
1816660d5466SHong Zhang   ierr = PetscBLASIntCast(a->A->cmap->n,&an);CHKERRQ(ierr);
1817660d5466SHong Zhang   ierr = PetscBLASIntCast(b->A->cmap->n,&bn);CHKERRQ(ierr);
1818660d5466SHong Zhang   ierr = PetscBLASIntCast(a->A->rmap->n,&am);CHKERRQ(ierr);
1819adc7a786SHong Zhang   ierr = PetscBLASIntCast(A->cmap->N,&aN);CHKERRQ(ierr);
1820adc7a786SHong Zhang   PetscStackCallBLAS("BLASgemm",BLASgemm_("T","N",&an,&bn,&am,&_DOne,aseq->v,&aseq->lda,bseq->v,&bseq->lda,&_DZero,atbarray,&aN));
1821cb20be35SHong Zhang 
1822cb20be35SHong Zhang   ierr = MatGetOwnershipRanges(C,&ranges);CHKERRQ(ierr);
1823c5ef1628SHong Zhang   for (i=0; i<size; i++) recvcounts[i] = (ranges[i+1] - ranges[i])*cN;
1824cb20be35SHong Zhang 
1825660d5466SHong Zhang   /* arrange atbarray into sendbuf */
1826cb20be35SHong Zhang   k = 0;
1827cb20be35SHong Zhang   for (proc=0; proc<size; proc++) {
1828baa3c1c6SHong Zhang     for (j=0; j<cN; j++) {
1829c5ef1628SHong Zhang       for (i=ranges[proc]; i<ranges[proc+1]; i++) sendbuf[k++] = atbarray[i+j*cM];
1830cb20be35SHong Zhang     }
1831cb20be35SHong Zhang   }
1832c5ef1628SHong Zhang   /* sum all atbarray to local values of C */
1833660d5466SHong Zhang   ierr = MatDenseGetArray(c->A,&carray);CHKERRQ(ierr);
18343462b7efSHong Zhang   ierr = MPI_Reduce_scatter(sendbuf,carray,recvcounts,MPIU_SCALAR,MPIU_SUM,comm);CHKERRQ(ierr);
1835660d5466SHong Zhang   ierr = MatDenseRestoreArray(c->A,&carray);CHKERRQ(ierr);
1836cb20be35SHong Zhang   PetscFunctionReturn(0);
1837cb20be35SHong Zhang }
1838cb20be35SHong Zhang 
1839cb20be35SHong Zhang #undef __FUNCT__
1840cb20be35SHong Zhang #define __FUNCT__ "MatTransposeMatMultSymbolic_MPIDense_MPIDense"
1841cb20be35SHong Zhang PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat *C)
1842cb20be35SHong Zhang {
1843cb20be35SHong Zhang   PetscErrorCode        ierr;
1844baa3c1c6SHong Zhang   Mat                   Cdense;
1845cb20be35SHong Zhang   MPI_Comm              comm;
1846baa3c1c6SHong Zhang   PetscMPIInt           size;
1847660d5466SHong Zhang   PetscInt              cm=A->cmap->n,cM,cN=B->cmap->N;
1848baa3c1c6SHong Zhang   Mat_MPIDense          *c;
1849baa3c1c6SHong Zhang   Mat_TransMatMultDense *atb;
1850cb20be35SHong Zhang 
1851cb20be35SHong Zhang   PetscFunctionBegin;
1852baa3c1c6SHong Zhang   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
1853cb20be35SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) {
1854cb20be35SHong Zhang     SETERRQ4(comm,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%D, %D) != B (%D,%D)",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
1855cb20be35SHong Zhang   }
1856cb20be35SHong Zhang 
1857baa3c1c6SHong Zhang   /* create matrix product Cdense */
1858baa3c1c6SHong Zhang   ierr = MatCreate(comm,&Cdense);CHKERRQ(ierr);
1859660d5466SHong Zhang   ierr = MatSetSizes(Cdense,cm,B->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
1860baa3c1c6SHong Zhang   ierr = MatSetType(Cdense,MATMPIDENSE);CHKERRQ(ierr);
1861baa3c1c6SHong Zhang   ierr = MatMPIDenseSetPreallocation(Cdense,NULL);CHKERRQ(ierr);
1862baa3c1c6SHong Zhang   ierr = MatAssemblyBegin(Cdense,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1863baa3c1c6SHong Zhang   ierr = MatAssemblyEnd(Cdense,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1864baa3c1c6SHong Zhang   *C   = Cdense;
1865baa3c1c6SHong Zhang 
1866baa3c1c6SHong Zhang   /* create data structure for reuse Cdense */
1867baa3c1c6SHong Zhang   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
1868baa3c1c6SHong Zhang   ierr = PetscNew(&atb);CHKERRQ(ierr);
1869660d5466SHong Zhang   cM = Cdense->rmap->N;
1870c5ef1628SHong Zhang   ierr = PetscMalloc3(cM*cN,&atb->sendbuf,cM*cN,&atb->atbarray,size,&atb->recvcounts);CHKERRQ(ierr);
1871baa3c1c6SHong Zhang 
1872baa3c1c6SHong Zhang   c                    = (Mat_MPIDense*)Cdense->data;
1873baa3c1c6SHong Zhang   c->atbdense          = atb;
1874baa3c1c6SHong Zhang   atb->destroy         = Cdense->ops->destroy;
1875baa3c1c6SHong Zhang   Cdense->ops->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense;
1876cb20be35SHong Zhang   PetscFunctionReturn(0);
1877cb20be35SHong Zhang }
1878cb20be35SHong Zhang 
1879cb20be35SHong Zhang #undef __FUNCT__
1880cb20be35SHong Zhang #define __FUNCT__ "MatTransposeMatMult_MPIDense_MPIDense"
1881cb20be35SHong Zhang PetscErrorCode MatTransposeMatMult_MPIDense_MPIDense(Mat A,Mat B,MatReuse scall,PetscReal fill,Mat *C)
1882cb20be35SHong Zhang {
1883cb20be35SHong Zhang   PetscErrorCode ierr;
1884cb20be35SHong Zhang 
1885cb20be35SHong Zhang   PetscFunctionBegin;
1886cb20be35SHong Zhang   if (scall == MAT_INITIAL_MATRIX) {
1887cb20be35SHong Zhang     ierr = MatTransposeMatMultSymbolic_MPIDense_MPIDense(A,B,fill,C);CHKERRQ(ierr);
1888cb20be35SHong Zhang   }
1889cb20be35SHong Zhang   ierr = MatTransposeMatMultNumeric_MPIDense_MPIDense(A,B,*C);CHKERRQ(ierr);
1890cb20be35SHong Zhang   PetscFunctionReturn(0);
1891cb20be35SHong Zhang }
1892*320f2790SHong Zhang 
1893*320f2790SHong Zhang #undef __FUNCT__
1894*320f2790SHong Zhang #define __FUNCT__ "MatDestroy_MatMatMult_MPIDense_MPIDense"
1895*320f2790SHong Zhang PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(Mat A)
1896*320f2790SHong Zhang {
1897*320f2790SHong Zhang   PetscErrorCode   ierr;
1898*320f2790SHong Zhang   Mat_MPIDense     *a = (Mat_MPIDense*)A->data;
1899*320f2790SHong Zhang   Mat_MatMultDense *ab = a->abdense;
1900*320f2790SHong Zhang 
1901*320f2790SHong Zhang   PetscFunctionBegin;
1902*320f2790SHong Zhang   ierr = MatDestroy(&ab->Ce);CHKERRQ(ierr);
1903*320f2790SHong Zhang   ierr = MatDestroy(&ab->Ae);CHKERRQ(ierr);
1904*320f2790SHong Zhang   ierr = MatDestroy(&ab->Be);CHKERRQ(ierr);
1905*320f2790SHong Zhang 
1906*320f2790SHong Zhang   ierr = (ab->destroy)(A);CHKERRQ(ierr);
1907*320f2790SHong Zhang   ierr = PetscFree(ab);CHKERRQ(ierr);
1908*320f2790SHong Zhang   PetscFunctionReturn(0);
1909*320f2790SHong Zhang }
1910*320f2790SHong Zhang 
1911*320f2790SHong Zhang #undef __FUNCT__
1912*320f2790SHong Zhang #define __FUNCT__ "MatMatMultNumeric_MPIDense_MPIDense"
1913*320f2790SHong Zhang PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
1914*320f2790SHong Zhang {
1915*320f2790SHong Zhang   PetscErrorCode   ierr;
1916*320f2790SHong Zhang   Mat              Cnew;
1917*320f2790SHong Zhang   Mat_MPIDense     *c=(Mat_MPIDense*)C->data;
1918*320f2790SHong Zhang   Mat_MatMultDense *ab=c->abdense;
1919*320f2790SHong Zhang 
1920*320f2790SHong Zhang   PetscFunctionBegin;
1921*320f2790SHong Zhang   ierr = MatDestroy(&ab->Ae);CHKERRQ(ierr);
1922*320f2790SHong Zhang   ierr = MatDestroy(&ab->Be);CHKERRQ(ierr);
1923*320f2790SHong Zhang 
1924*320f2790SHong Zhang   ierr = MatConvert(A,MATELEMENTAL,MAT_INITIAL_MATRIX, &ab->Ae);CHKERRQ(ierr);
1925*320f2790SHong Zhang   ierr = MatConvert(B,MATELEMENTAL,MAT_INITIAL_MATRIX, &ab->Be);CHKERRQ(ierr);
1926*320f2790SHong Zhang   ierr = MatMatMultNumeric(ab->Ae,ab->Be,ab->Ce);CHKERRQ(ierr);
1927*320f2790SHong Zhang 
1928*320f2790SHong Zhang 
1929*320f2790SHong Zhang   ierr = MatConvert(ab->Ce,MATMPIDENSE,MAT_INITIAL_MATRIX,&Cnew);CHKERRQ(ierr);
1930*320f2790SHong Zhang 
1931*320f2790SHong Zhang   C->ops->destroy = ab->destroy; /* prevent struct ab being destroyeed by MatHeaderReplace() */
1932*320f2790SHong Zhang   ierr = MatHeaderReplace(C,&Cnew);CHKERRQ(ierr);
1933*320f2790SHong Zhang   C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense;
1934*320f2790SHong Zhang   C->ops->destroy        = MatDestroy_MatMatMult_MPIDense_MPIDense;
1935*320f2790SHong Zhang   c                      = (Mat_MPIDense*)C->data;
1936*320f2790SHong Zhang   c->abdense             = ab;
1937*320f2790SHong Zhang   PetscFunctionReturn(0);
1938*320f2790SHong Zhang }
1939*320f2790SHong Zhang 
1940*320f2790SHong Zhang #undef __FUNCT__
1941*320f2790SHong Zhang #define __FUNCT__ "MatMatMultSymbolic_MPIDense_MPIDense"
1942*320f2790SHong Zhang PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat *C)
1943*320f2790SHong Zhang {
1944*320f2790SHong Zhang   PetscErrorCode   ierr;
1945*320f2790SHong Zhang   MPI_Comm         comm;
1946*320f2790SHong Zhang   Mat              Ae,Be,Ce;
1947*320f2790SHong Zhang   Mat_MPIDense     *c;
1948*320f2790SHong Zhang   Mat_MatMultDense *ab;
1949*320f2790SHong Zhang 
1950*320f2790SHong Zhang   PetscFunctionBegin;
1951*320f2790SHong Zhang   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
1952*320f2790SHong Zhang   if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend) {
1953*320f2790SHong Zhang     SETERRQ4(comm,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%D, %D) != B (%D,%D)",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
1954*320f2790SHong Zhang   }
1955*320f2790SHong Zhang 
1956*320f2790SHong Zhang   /* convert A and B to Elemental matrices Ae and Be */
1957*320f2790SHong Zhang   ierr = MatConvert(A,MATELEMENTAL,MAT_INITIAL_MATRIX, &Ae);CHKERRQ(ierr);
1958*320f2790SHong Zhang   ierr = MatConvert(B,MATELEMENTAL,MAT_INITIAL_MATRIX, &Be);CHKERRQ(ierr);
1959*320f2790SHong Zhang 
1960*320f2790SHong Zhang   /* Ce = Ae*Be */
1961*320f2790SHong Zhang   ierr = MatMatMultSymbolic(Ae,Be,fill,&Ce);CHKERRQ(ierr);
1962*320f2790SHong Zhang   ierr = MatMatMultNumeric(Ae,Be,Ce);CHKERRQ(ierr);
1963*320f2790SHong Zhang 
1964*320f2790SHong Zhang   /* convert Ce to C */
1965*320f2790SHong Zhang   ierr = MatConvert(Ce,MATMPIDENSE,MAT_INITIAL_MATRIX,C);CHKERRQ(ierr);
1966*320f2790SHong Zhang 
1967*320f2790SHong Zhang   //ierr = MatDestroy(&Ae);CHKERRQ(ierr);
1968*320f2790SHong Zhang   //ierr = MatDestroy(&Be);CHKERRQ(ierr);
1969*320f2790SHong Zhang   //ierr = MatDestroy(&Ce);CHKERRQ(ierr);
1970*320f2790SHong Zhang 
1971*320f2790SHong Zhang   /* create data structure for reuse Cdense */
1972*320f2790SHong Zhang   ierr = PetscNew(&ab);CHKERRQ(ierr);
1973*320f2790SHong Zhang   c                  = (Mat_MPIDense*)(*C)->data;
1974*320f2790SHong Zhang   c->abdense         = ab;
1975*320f2790SHong Zhang 
1976*320f2790SHong Zhang   ab->Ae             = Ae;
1977*320f2790SHong Zhang   ab->Be             = Be;
1978*320f2790SHong Zhang   ab->Ce             = Ce;
1979*320f2790SHong Zhang   ab->destroy        = (*C)->ops->destroy;
1980*320f2790SHong Zhang   (*C)->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense;
1981*320f2790SHong Zhang   (*C)->ops->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense;
1982*320f2790SHong Zhang   PetscFunctionReturn(0);
1983*320f2790SHong Zhang }
1984*320f2790SHong Zhang 
1985*320f2790SHong Zhang #undef __FUNCT__
1986*320f2790SHong Zhang #define __FUNCT__ "MatMatMult_MPIDense_MPIDense"
1987*320f2790SHong Zhang PetscErrorCode MatMatMult_MPIDense_MPIDense(Mat A,Mat B,MatReuse scall,PetscReal fill,Mat *C)
1988*320f2790SHong Zhang {
1989*320f2790SHong Zhang   PetscErrorCode ierr;
1990*320f2790SHong Zhang 
1991*320f2790SHong Zhang   PetscFunctionBegin;
1992*320f2790SHong Zhang   if (scall == MAT_INITIAL_MATRIX) { /* simbolic product includes numeric product */
1993*320f2790SHong Zhang     ierr = MatMatMultSymbolic_MPIDense_MPIDense(A,B,fill,C);CHKERRQ(ierr);
1994*320f2790SHong Zhang   } else {
1995*320f2790SHong Zhang     ierr = MatMatMultNumeric_MPIDense_MPIDense(A,B,*C);CHKERRQ(ierr);
1996*320f2790SHong Zhang   }
1997*320f2790SHong Zhang   PetscFunctionReturn(0);
1998*320f2790SHong Zhang }
1999