1be1d678aSKris Buschelman 2ed3cc1f0SBarry Smith /* 3ed3cc1f0SBarry Smith Basic functions for basic parallel dense matrices. 4ed3cc1f0SBarry Smith */ 5ed3cc1f0SBarry Smith 6c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h> /*I "petscmat.h" I*/ 78949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h> 8baa3c1c6SHong Zhang #include <petscblaslapack.h> 98965ea79SLois Curfman McInnes 10ab92ecdeSBarry Smith /*@ 1111a5261eSBarry Smith MatDenseGetLocalMatrix - For a `MATMPIDENSE` or `MATSEQDENSE` matrix returns the sequential 12ab92ecdeSBarry Smith matrix that represents the operator. For sequential matrices it returns itself. 13ab92ecdeSBarry Smith 14ab92ecdeSBarry Smith Input Parameter: 1511a5261eSBarry Smith . A - the sequential or MPI dense matrix 16ab92ecdeSBarry Smith 17ab92ecdeSBarry Smith Output Parameter: 18ab92ecdeSBarry Smith . B - the inner matrix 19ab92ecdeSBarry Smith 208e6c10adSSatish Balay Level: intermediate 218e6c10adSSatish Balay 2211a5261eSBarry Smith .seealso: `MATDENSE`, `MATMPIDENSE`, `MATSEQDENSE` 23ab92ecdeSBarry Smith @*/ 249371c9d4SSatish Balay PetscErrorCode MatDenseGetLocalMatrix(Mat A, Mat *B) { 25ab92ecdeSBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 26ace3abfcSBarry Smith PetscBool flg; 27ab92ecdeSBarry Smith 28ab92ecdeSBarry Smith PetscFunctionBegin; 29d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 30d5ea218eSStefano Zampini PetscValidPointer(B, 2); 319566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATMPIDENSE, &flg)); 322205254eSKarl Rupp if (flg) *B = mat->A; 33f140bc17SStefano Zampini else { 349566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATSEQDENSE, &flg)); 3528b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for matrix type %s", ((PetscObject)A)->type_name); 36f140bc17SStefano Zampini *B = A; 37f140bc17SStefano Zampini } 38ab92ecdeSBarry Smith PetscFunctionReturn(0); 39ab92ecdeSBarry Smith } 40ab92ecdeSBarry Smith 419371c9d4SSatish Balay PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s) { 42a76f77c3SStefano Zampini Mat_MPIDense *Amat = (Mat_MPIDense *)A->data; 43a76f77c3SStefano Zampini Mat_MPIDense *Bmat = (Mat_MPIDense *)B->data; 44a76f77c3SStefano Zampini 45a76f77c3SStefano Zampini PetscFunctionBegin; 469566063dSJacob Faibussowitsch PetscCall(MatCopy(Amat->A, Bmat->A, s)); 47a76f77c3SStefano Zampini PetscFunctionReturn(0); 48a76f77c3SStefano Zampini } 49a76f77c3SStefano Zampini 509371c9d4SSatish Balay PetscErrorCode MatShift_MPIDense(Mat A, PetscScalar alpha) { 512f605a99SJose E. Roman Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 522f605a99SJose E. Roman PetscInt j, lda, rstart = A->rmap->rstart, rend = A->rmap->rend, rend2; 532f605a99SJose E. Roman PetscScalar *v; 542f605a99SJose E. Roman 552f605a99SJose E. Roman PetscFunctionBegin; 562f605a99SJose E. Roman PetscCall(MatDenseGetArray(mat->A, &v)); 572f605a99SJose E. Roman PetscCall(MatDenseGetLDA(mat->A, &lda)); 582f605a99SJose E. Roman rend2 = PetscMin(rend, A->cmap->N); 592f605a99SJose E. Roman if (rend2 > rstart) { 602f605a99SJose E. Roman for (j = rstart; j < rend2; j++) v[j - rstart + j * lda] += alpha; 612f605a99SJose E. Roman PetscCall(PetscLogFlops(rend2 - rstart)); 622f605a99SJose E. Roman } 632f605a99SJose E. Roman PetscCall(MatDenseRestoreArray(mat->A, &v)); 642f605a99SJose E. Roman PetscFunctionReturn(0); 652f605a99SJose E. Roman } 662f605a99SJose E. Roman 679371c9d4SSatish Balay PetscErrorCode MatGetRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) { 68ba8c8a56SBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 69d0f46423SBarry Smith PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 70ba8c8a56SBarry Smith 71ba8c8a56SBarry Smith PetscFunctionBegin; 72aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 73ba8c8a56SBarry Smith lrow = row - rstart; 749566063dSJacob Faibussowitsch PetscCall(MatGetRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 75ba8c8a56SBarry Smith PetscFunctionReturn(0); 76ba8c8a56SBarry Smith } 77ba8c8a56SBarry Smith 789371c9d4SSatish Balay PetscErrorCode MatRestoreRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) { 79637a0070SStefano Zampini Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 80637a0070SStefano Zampini PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 81ba8c8a56SBarry Smith 82ba8c8a56SBarry Smith PetscFunctionBegin; 83aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 84637a0070SStefano Zampini lrow = row - rstart; 859566063dSJacob Faibussowitsch PetscCall(MatRestoreRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 86ba8c8a56SBarry Smith PetscFunctionReturn(0); 87ba8c8a56SBarry Smith } 88ba8c8a56SBarry Smith 899371c9d4SSatish Balay PetscErrorCode MatGetDiagonalBlock_MPIDense(Mat A, Mat *a) { 900de54da6SSatish Balay Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 91d0f46423SBarry Smith PetscInt m = A->rmap->n, rstart = A->rmap->rstart; 9287828ca2SBarry Smith PetscScalar *array; 930de54da6SSatish Balay MPI_Comm comm; 944b6ae80fSStefano Zampini PetscBool flg; 9511bd1e4dSLisandro Dalcin Mat B; 960de54da6SSatish Balay 970de54da6SSatish Balay PetscFunctionBegin; 989566063dSJacob Faibussowitsch PetscCall(MatHasCongruentLayouts(A, &flg)); 9928b400f6SJacob Faibussowitsch PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only square matrices supported."); 1009566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery((PetscObject)A, "DiagonalBlock", (PetscObject *)&B)); 101616b8fbbSStefano Zampini if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */ 1024b6ae80fSStefano Zampini 1039566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSECUDA, &flg)); 10428b400f6SJacob Faibussowitsch PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSECUDA); 1059566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)(mdn->A), &comm)); 1069566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &B)); 1079566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, m, m, m, m)); 1089566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)mdn->A)->type_name)); 1099566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, (const PetscScalar **)&array)); 1109566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(B, array + m * rstart)); 1119566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, (const PetscScalar **)&array)); 1129566063dSJacob Faibussowitsch PetscCall(PetscObjectCompose((PetscObject)A, "DiagonalBlock", (PetscObject)B)); 11311bd1e4dSLisandro Dalcin *a = B; 1149566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 1152205254eSKarl Rupp } else *a = B; 1160de54da6SSatish Balay PetscFunctionReturn(0); 1170de54da6SSatish Balay } 1180de54da6SSatish Balay 1199371c9d4SSatish Balay PetscErrorCode MatSetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv) { 12039b7565bSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)mat->data; 121d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 122ace3abfcSBarry Smith PetscBool roworiented = A->roworiented; 1238965ea79SLois Curfman McInnes 1243a40ed3dSBarry Smith PetscFunctionBegin; 1258965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 1265ef9f2a5SBarry Smith if (idxm[i] < 0) continue; 12708401ef6SPierre Jolivet PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 1288965ea79SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 1298965ea79SLois Curfman McInnes row = idxm[i] - rstart; 13039b7565bSBarry Smith if (roworiented) { 1319566063dSJacob Faibussowitsch PetscCall(MatSetValues(A->A, 1, &row, n, idxn, v + i * n, addv)); 1323a40ed3dSBarry Smith } else { 1338965ea79SLois Curfman McInnes for (j = 0; j < n; j++) { 1345ef9f2a5SBarry Smith if (idxn[j] < 0) continue; 13508401ef6SPierre Jolivet PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1369566063dSJacob Faibussowitsch PetscCall(MatSetValues(A->A, 1, &row, 1, &idxn[j], v + i + j * m, addv)); 13739b7565bSBarry Smith } 1388965ea79SLois Curfman McInnes } 1392205254eSKarl Rupp } else if (!A->donotstash) { 1405080c13bSMatthew G Knepley mat->assembled = PETSC_FALSE; 14139b7565bSBarry Smith if (roworiented) { 1429566063dSJacob Faibussowitsch PetscCall(MatStashValuesRow_Private(&mat->stash, idxm[i], n, idxn, v + i * n, PETSC_FALSE)); 143d36fbae8SSatish Balay } else { 1449566063dSJacob Faibussowitsch PetscCall(MatStashValuesCol_Private(&mat->stash, idxm[i], n, idxn, v + i, m, PETSC_FALSE)); 14539b7565bSBarry Smith } 146b49de8d1SLois Curfman McInnes } 147b49de8d1SLois Curfman McInnes } 1483a40ed3dSBarry Smith PetscFunctionReturn(0); 149b49de8d1SLois Curfman McInnes } 150b49de8d1SLois Curfman McInnes 1519371c9d4SSatish Balay PetscErrorCode MatGetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], PetscScalar v[]) { 152b49de8d1SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 153d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 154b49de8d1SLois Curfman McInnes 1553a40ed3dSBarry Smith PetscFunctionBegin; 156b49de8d1SLois Curfman McInnes for (i = 0; i < m; i++) { 15754c59aa7SJacob Faibussowitsch if (idxm[i] < 0) continue; /* negative row */ 15854c59aa7SJacob Faibussowitsch PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 159b49de8d1SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 160b49de8d1SLois Curfman McInnes row = idxm[i] - rstart; 161b49de8d1SLois Curfman McInnes for (j = 0; j < n; j++) { 16254c59aa7SJacob Faibussowitsch if (idxn[j] < 0) continue; /* negative column */ 16354c59aa7SJacob Faibussowitsch PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1649566063dSJacob Faibussowitsch PetscCall(MatGetValues(mdn->A, 1, &row, 1, &idxn[j], v + i * n + j)); 165b49de8d1SLois Curfman McInnes } 166e7e72b3dSBarry Smith } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Only local values currently supported"); 1678965ea79SLois Curfman McInnes } 1683a40ed3dSBarry Smith PetscFunctionReturn(0); 1698965ea79SLois Curfman McInnes } 1708965ea79SLois Curfman McInnes 1719371c9d4SSatish Balay static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A, PetscInt *lda) { 17249a6ff4bSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 17349a6ff4bSBarry Smith 17449a6ff4bSBarry Smith PetscFunctionBegin; 1759566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, lda)); 17649a6ff4bSBarry Smith PetscFunctionReturn(0); 17749a6ff4bSBarry Smith } 17849a6ff4bSBarry Smith 1799371c9d4SSatish Balay static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A, PetscInt lda) { 180ad16ce7aSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 18117359960SJose E. Roman PetscBool iscuda; 182ad16ce7aSStefano Zampini 183ad16ce7aSStefano Zampini PetscFunctionBegin; 18417359960SJose E. Roman if (!a->A) { 18528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1869566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 1879566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 1889566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 1899566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->A)); 1909566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N)); 1919566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda)); 1929566063dSJacob Faibussowitsch PetscCall(MatSetType(a->A, iscuda ? MATSEQDENSECUDA : MATSEQDENSE)); 19317359960SJose E. Roman } 1949566063dSJacob Faibussowitsch PetscCall(MatDenseSetLDA(a->A, lda)); 195ad16ce7aSStefano Zampini PetscFunctionReturn(0); 196ad16ce7aSStefano Zampini } 197ad16ce7aSStefano Zampini 1989371c9d4SSatish Balay static PetscErrorCode MatDenseGetArray_MPIDense(Mat A, PetscScalar **array) { 199ff14e315SSatish Balay Mat_MPIDense *a = (Mat_MPIDense *)A->data; 200ff14e315SSatish Balay 2013a40ed3dSBarry Smith PetscFunctionBegin; 20228b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2039566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, array)); 2043a40ed3dSBarry Smith PetscFunctionReturn(0); 205ff14e315SSatish Balay } 206ff14e315SSatish Balay 2079371c9d4SSatish Balay static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A, const PetscScalar **array) { 2088572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2098572280aSBarry Smith 2108572280aSBarry Smith PetscFunctionBegin; 21128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2129566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, array)); 2138572280aSBarry Smith PetscFunctionReturn(0); 2148572280aSBarry Smith } 2158572280aSBarry Smith 2169371c9d4SSatish Balay static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A, PetscScalar **array) { 2176947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2186947451fSStefano Zampini 2196947451fSStefano Zampini PetscFunctionBegin; 22028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2219566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, array)); 2226947451fSStefano Zampini PetscFunctionReturn(0); 2236947451fSStefano Zampini } 2246947451fSStefano Zampini 2259371c9d4SSatish Balay static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A, const PetscScalar *array) { 226d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 227d3042a70SBarry Smith 228d3042a70SBarry Smith PetscFunctionBegin; 22928b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 23028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2319566063dSJacob Faibussowitsch PetscCall(MatDensePlaceArray(a->A, array)); 232d3042a70SBarry Smith PetscFunctionReturn(0); 233d3042a70SBarry Smith } 234d3042a70SBarry Smith 2359371c9d4SSatish Balay static PetscErrorCode MatDenseResetArray_MPIDense(Mat A) { 236d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 237d3042a70SBarry Smith 238d3042a70SBarry Smith PetscFunctionBegin; 23928b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 24028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2419566063dSJacob Faibussowitsch PetscCall(MatDenseResetArray(a->A)); 242d3042a70SBarry Smith PetscFunctionReturn(0); 243d3042a70SBarry Smith } 244d3042a70SBarry Smith 2459371c9d4SSatish Balay static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A, const PetscScalar *array) { 246d5ea218eSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 247d5ea218eSStefano Zampini 248d5ea218eSStefano Zampini PetscFunctionBegin; 24928b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 25028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2519566063dSJacob Faibussowitsch PetscCall(MatDenseReplaceArray(a->A, array)); 252d5ea218eSStefano Zampini PetscFunctionReturn(0); 253d5ea218eSStefano Zampini } 254d5ea218eSStefano Zampini 2559371c9d4SSatish Balay static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A, IS isrow, IS iscol, MatReuse scall, Mat *B) { 256ca3fa75bSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data, *newmatd; 257637a0070SStefano Zampini PetscInt lda, i, j, rstart, rend, nrows, ncols, Ncols, nlrows, nlcols; 2585d0c19d7SBarry Smith const PetscInt *irow, *icol; 259637a0070SStefano Zampini const PetscScalar *v; 260637a0070SStefano Zampini PetscScalar *bv; 261ca3fa75bSLois Curfman McInnes Mat newmat; 2624aa3045dSJed Brown IS iscol_local; 26342a884f0SBarry Smith MPI_Comm comm_is, comm_mat; 264ca3fa75bSLois Curfman McInnes 265ca3fa75bSLois Curfman McInnes PetscFunctionBegin; 2669566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm_mat)); 2679566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)iscol, &comm_is)); 26808401ef6SPierre Jolivet PetscCheck(comm_mat == comm_is, PETSC_COMM_SELF, PETSC_ERR_ARG_NOTSAMECOMM, "IS communicator must match matrix communicator"); 26942a884f0SBarry Smith 2709566063dSJacob Faibussowitsch PetscCall(ISAllGather(iscol, &iscol_local)); 2719566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &irow)); 2729566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol_local, &icol)); 2739566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(isrow, &nrows)); 2749566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(iscol, &ncols)); 2759566063dSJacob Faibussowitsch PetscCall(ISGetSize(iscol, &Ncols)); /* global number of columns, size of iscol_local */ 276ca3fa75bSLois Curfman McInnes 277ca3fa75bSLois Curfman McInnes /* No parallel redistribution currently supported! Should really check each index set 2787eba5e9cSLois Curfman McInnes to comfirm that it is OK. ... Currently supports only submatrix same partitioning as 2797eba5e9cSLois Curfman McInnes original matrix! */ 280ca3fa75bSLois Curfman McInnes 2819566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &nlrows, &nlcols)); 2829566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRange(A, &rstart, &rend)); 283ca3fa75bSLois Curfman McInnes 284ca3fa75bSLois Curfman McInnes /* Check submatrix call */ 285ca3fa75bSLois Curfman McInnes if (scall == MAT_REUSE_MATRIX) { 286e32f2f54SBarry Smith /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */ 2877eba5e9cSLois Curfman McInnes /* Really need to test rows and column sizes! */ 288ca3fa75bSLois Curfman McInnes newmat = *B; 289ca3fa75bSLois Curfman McInnes } else { 290ca3fa75bSLois Curfman McInnes /* Create and fill new matrix */ 2919566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &newmat)); 2929566063dSJacob Faibussowitsch PetscCall(MatSetSizes(newmat, nrows, ncols, PETSC_DECIDE, Ncols)); 2939566063dSJacob Faibussowitsch PetscCall(MatSetType(newmat, ((PetscObject)A)->type_name)); 2949566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(newmat, NULL)); 295ca3fa75bSLois Curfman McInnes } 296ca3fa75bSLois Curfman McInnes 297ca3fa75bSLois Curfman McInnes /* Now extract the data pointers and do the copy, column at a time */ 298ca3fa75bSLois Curfman McInnes newmatd = (Mat_MPIDense *)newmat->data; 2999566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(newmatd->A, &bv)); 3009566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mat->A, &v)); 3019566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mat->A, &lda)); 3024aa3045dSJed Brown for (i = 0; i < Ncols; i++) { 303637a0070SStefano Zampini const PetscScalar *av = v + lda * icol[i]; 304ad540459SPierre Jolivet for (j = 0; j < nrows; j++) *bv++ = av[irow[j] - rstart]; 305ca3fa75bSLois Curfman McInnes } 3069566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mat->A, &v)); 3079566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(newmatd->A, &bv)); 308ca3fa75bSLois Curfman McInnes 309ca3fa75bSLois Curfman McInnes /* Assemble the matrices so that the correct flags are set */ 3109566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(newmat, MAT_FINAL_ASSEMBLY)); 3119566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(newmat, MAT_FINAL_ASSEMBLY)); 312ca3fa75bSLois Curfman McInnes 313ca3fa75bSLois Curfman McInnes /* Free work space */ 3149566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &irow)); 3159566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol_local, &icol)); 3169566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iscol_local)); 317ca3fa75bSLois Curfman McInnes *B = newmat; 318ca3fa75bSLois Curfman McInnes PetscFunctionReturn(0); 319ca3fa75bSLois Curfman McInnes } 320ca3fa75bSLois Curfman McInnes 3219371c9d4SSatish Balay PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A, PetscScalar **array) { 32273a71a0fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 32373a71a0fSBarry Smith 3243a40ed3dSBarry Smith PetscFunctionBegin; 3259566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, array)); 3263a40ed3dSBarry Smith PetscFunctionReturn(0); 327ff14e315SSatish Balay } 328ff14e315SSatish Balay 3299371c9d4SSatish Balay PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A, const PetscScalar **array) { 3308572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3318572280aSBarry Smith 3328572280aSBarry Smith PetscFunctionBegin; 3339566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, array)); 3348572280aSBarry Smith PetscFunctionReturn(0); 3358572280aSBarry Smith } 3368572280aSBarry Smith 3379371c9d4SSatish Balay PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A, PetscScalar **array) { 3386947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3396947451fSStefano Zampini 3406947451fSStefano Zampini PetscFunctionBegin; 3419566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, array)); 3426947451fSStefano Zampini PetscFunctionReturn(0); 3436947451fSStefano Zampini } 3446947451fSStefano Zampini 3459371c9d4SSatish Balay PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat, MatAssemblyType mode) { 34639ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 34713f74950SBarry Smith PetscInt nstash, reallocs; 3488965ea79SLois Curfman McInnes 3493a40ed3dSBarry Smith PetscFunctionBegin; 3504067683fSStefano Zampini if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(0); 3518965ea79SLois Curfman McInnes 3529566063dSJacob Faibussowitsch PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); 3539566063dSJacob Faibussowitsch PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); 3549566063dSJacob Faibussowitsch PetscCall(PetscInfo(mdn->A, "Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n", nstash, reallocs)); 3553a40ed3dSBarry Smith PetscFunctionReturn(0); 3568965ea79SLois Curfman McInnes } 3578965ea79SLois Curfman McInnes 3589371c9d4SSatish Balay PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat, MatAssemblyType mode) { 35939ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 36013f74950SBarry Smith PetscInt i, *row, *col, flg, j, rstart, ncols; 36113f74950SBarry Smith PetscMPIInt n; 36287828ca2SBarry Smith PetscScalar *val; 3638965ea79SLois Curfman McInnes 3643a40ed3dSBarry Smith PetscFunctionBegin; 365910cf402Sprj- if (!mdn->donotstash && !mat->nooffprocentries) { 3668965ea79SLois Curfman McInnes /* wait on receives */ 3677ef1d9bdSSatish Balay while (1) { 3689566063dSJacob Faibussowitsch PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); 3697ef1d9bdSSatish Balay if (!flg) break; 3708965ea79SLois Curfman McInnes 3717ef1d9bdSSatish Balay for (i = 0; i < n;) { 3727ef1d9bdSSatish Balay /* Now identify the consecutive vals belonging to the same row */ 3732205254eSKarl Rupp for (j = i, rstart = row[j]; j < n; j++) { 3742205254eSKarl Rupp if (row[j] != rstart) break; 3752205254eSKarl Rupp } 3767ef1d9bdSSatish Balay if (j < n) ncols = j - i; 3777ef1d9bdSSatish Balay else ncols = n - i; 3787ef1d9bdSSatish Balay /* Now assemble all these values with a single function call */ 3799566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(mat, 1, row + i, ncols, col + i, val + i, mat->insertmode)); 3807ef1d9bdSSatish Balay i = j; 3818965ea79SLois Curfman McInnes } 3827ef1d9bdSSatish Balay } 3839566063dSJacob Faibussowitsch PetscCall(MatStashScatterEnd_Private(&mat->stash)); 384910cf402Sprj- } 3858965ea79SLois Curfman McInnes 3869566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mdn->A, mode)); 3879566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mdn->A, mode)); 3883a40ed3dSBarry Smith PetscFunctionReturn(0); 3898965ea79SLois Curfman McInnes } 3908965ea79SLois Curfman McInnes 3919371c9d4SSatish Balay PetscErrorCode MatZeroEntries_MPIDense(Mat A) { 39239ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 3933a40ed3dSBarry Smith 3943a40ed3dSBarry Smith PetscFunctionBegin; 3959566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(l->A)); 3963a40ed3dSBarry Smith PetscFunctionReturn(0); 3978965ea79SLois Curfman McInnes } 3988965ea79SLois Curfman McInnes 3999371c9d4SSatish Balay PetscErrorCode MatZeroRows_MPIDense(Mat A, PetscInt n, const PetscInt rows[], PetscScalar diag, Vec x, Vec b) { 40039ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 401637a0070SStefano Zampini PetscInt i, len, *lrows; 402637a0070SStefano Zampini 403637a0070SStefano Zampini PetscFunctionBegin; 404637a0070SStefano Zampini /* get locally owned rows */ 4059566063dSJacob Faibussowitsch PetscCall(PetscLayoutMapLocal(A->rmap, n, rows, &len, &lrows, NULL)); 406637a0070SStefano Zampini /* fix right hand side if needed */ 407637a0070SStefano Zampini if (x && b) { 40897b48c8fSBarry Smith const PetscScalar *xx; 40997b48c8fSBarry Smith PetscScalar *bb; 4108965ea79SLois Curfman McInnes 4119566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(x, &xx)); 4129566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(b, &bb)); 413637a0070SStefano Zampini for (i = 0; i < len; ++i) bb[lrows[i]] = diag * xx[lrows[i]]; 4149566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(x, &xx)); 4159566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(b, &bb)); 41697b48c8fSBarry Smith } 4179566063dSJacob Faibussowitsch PetscCall(MatZeroRows(l->A, len, lrows, 0.0, NULL, NULL)); 418e2eb51b1SBarry Smith if (diag != 0.0) { 419637a0070SStefano Zampini Vec d; 420b9679d65SBarry Smith 4219566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A, NULL, &d)); 4229566063dSJacob Faibussowitsch PetscCall(VecSet(d, diag)); 4239566063dSJacob Faibussowitsch PetscCall(MatDiagonalSet(A, d, INSERT_VALUES)); 4249566063dSJacob Faibussowitsch PetscCall(VecDestroy(&d)); 425b9679d65SBarry Smith } 4269566063dSJacob Faibussowitsch PetscCall(PetscFree(lrows)); 4273a40ed3dSBarry Smith PetscFunctionReturn(0); 4288965ea79SLois Curfman McInnes } 4298965ea79SLois Curfman McInnes 430cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat, Vec, Vec); 431cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat, Vec, Vec, Vec); 432cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat, Vec, Vec); 433cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat, Vec, Vec, Vec); 434cc2e6a90SBarry Smith 4359371c9d4SSatish Balay PetscErrorCode MatMult_MPIDense(Mat mat, Vec xx, Vec yy) { 43639ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 437637a0070SStefano Zampini const PetscScalar *ax; 438637a0070SStefano Zampini PetscScalar *ay; 439d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 440c456f294SBarry Smith 4413a40ed3dSBarry Smith PetscFunctionBegin; 4426f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 4439566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 4449566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 4459566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 4469566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 4479566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 4489566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 4499566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->mult)(mdn->A, mdn->lvec, yy)); 4503a40ed3dSBarry Smith PetscFunctionReturn(0); 4518965ea79SLois Curfman McInnes } 4528965ea79SLois Curfman McInnes 4539371c9d4SSatish Balay PetscErrorCode MatMultAdd_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz) { 45439ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 455637a0070SStefano Zampini const PetscScalar *ax; 456637a0070SStefano Zampini PetscScalar *ay; 457d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 458c456f294SBarry Smith 4593a40ed3dSBarry Smith PetscFunctionBegin; 4606f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 4619566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 4629566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 4639566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 4649566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 4659566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 4669566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 4679566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->multadd)(mdn->A, mdn->lvec, yy, zz)); 4683a40ed3dSBarry Smith PetscFunctionReturn(0); 4698965ea79SLois Curfman McInnes } 4708965ea79SLois Curfman McInnes 4719371c9d4SSatish Balay PetscErrorCode MatMultTranspose_MPIDense(Mat A, Vec xx, Vec yy) { 472096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 473637a0070SStefano Zampini const PetscScalar *ax; 474637a0070SStefano Zampini PetscScalar *ay; 475d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 476096963f5SLois Curfman McInnes 4773a40ed3dSBarry Smith PetscFunctionBegin; 4786f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 4799566063dSJacob Faibussowitsch PetscCall(VecSet(yy, 0.0)); 4809566063dSJacob Faibussowitsch PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 4819566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 4829566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 4839566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 4849566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 4859566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 4869566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 4873a40ed3dSBarry Smith PetscFunctionReturn(0); 488096963f5SLois Curfman McInnes } 489096963f5SLois Curfman McInnes 4909371c9d4SSatish Balay PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) { 491096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 492637a0070SStefano Zampini const PetscScalar *ax; 493637a0070SStefano Zampini PetscScalar *ay; 494d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 495096963f5SLois Curfman McInnes 4963a40ed3dSBarry Smith PetscFunctionBegin; 4976f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 4989566063dSJacob Faibussowitsch PetscCall(VecCopy(yy, zz)); 4999566063dSJacob Faibussowitsch PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 5009566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5019566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 5029566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5039566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5049566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5059566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 5063a40ed3dSBarry Smith PetscFunctionReturn(0); 507096963f5SLois Curfman McInnes } 508096963f5SLois Curfman McInnes 5099371c9d4SSatish Balay PetscErrorCode MatGetDiagonal_MPIDense(Mat A, Vec v) { 51039ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 511637a0070SStefano Zampini PetscInt lda, len, i, n, m = A->rmap->n, radd; 51287828ca2SBarry Smith PetscScalar *x, zero = 0.0; 513637a0070SStefano Zampini const PetscScalar *av; 514ed3cc1f0SBarry Smith 5153a40ed3dSBarry Smith PetscFunctionBegin; 5169566063dSJacob Faibussowitsch PetscCall(VecSet(v, zero)); 5179566063dSJacob Faibussowitsch PetscCall(VecGetArray(v, &x)); 5189566063dSJacob Faibussowitsch PetscCall(VecGetSize(v, &n)); 51908401ef6SPierre Jolivet PetscCheck(n == A->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming mat and vec"); 520d0f46423SBarry Smith len = PetscMin(a->A->rmap->n, a->A->cmap->n); 521d0f46423SBarry Smith radd = A->rmap->rstart * m; 5229566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 5239566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 524ad540459SPierre Jolivet for (i = 0; i < len; i++) x[i] = av[radd + i * lda + i]; 5259566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 5269566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(v, &x)); 5273a40ed3dSBarry Smith PetscFunctionReturn(0); 5288965ea79SLois Curfman McInnes } 5298965ea79SLois Curfman McInnes 5309371c9d4SSatish Balay PetscErrorCode MatDestroy_MPIDense(Mat mat) { 5313501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 532ed3cc1f0SBarry Smith 5333a40ed3dSBarry Smith PetscFunctionBegin; 534aa482453SBarry Smith #if defined(PETSC_USE_LOG) 535c0aa6a63SJacob Faibussowitsch PetscLogObjectState((PetscObject)mat, "Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT, mat->rmap->N, mat->cmap->N); 5368965ea79SLois Curfman McInnes #endif 5379566063dSJacob Faibussowitsch PetscCall(MatStashDestroy_Private(&mat->stash)); 53828b400f6SJacob Faibussowitsch PetscCheck(!mdn->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 53928b400f6SJacob Faibussowitsch PetscCheck(!mdn->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 5409566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->A)); 5419566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->lvec)); 5429566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&mdn->Mvctx)); 5439566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->cvec)); 5449566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->cmat)); 54501b82886SBarry Smith 5469566063dSJacob Faibussowitsch PetscCall(PetscFree(mat->data)); 5479566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, NULL)); 5488baccfbdSHong Zhang 5499566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", NULL)); 5509566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", NULL)); 5519566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", NULL)); 5529566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", NULL)); 5539566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", NULL)); 5549566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", NULL)); 5559566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", NULL)); 5569566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", NULL)); 5579566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", NULL)); 5589566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", NULL)); 5599566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", NULL)); 5609566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", NULL)); 5619566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", NULL)); 5628baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 5639566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", NULL)); 5648baccfbdSHong Zhang #endif 565d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 5669566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", NULL)); 567d24d4204SJose E. Roman #endif 5689566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", NULL)); 5699566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", NULL)); 5709566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", NULL)); 5716718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 5729566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", NULL)); 5739566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", NULL)); 5742e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", NULL)); 5752e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensecuda_mpidense_C", NULL)); 5762e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL)); 5772e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL)); 5782e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL)); 5792e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL)); 5802e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArray_C", NULL)); 5812e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayRead_C", NULL)); 5822e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayWrite_C", NULL)); 5832e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArray_C", NULL)); 5842e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayRead_C", NULL)); 5852e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayWrite_C", NULL)); 5862e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAPlaceArray_C", NULL)); 5872e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAResetArray_C", NULL)); 5882e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAReplaceArray_C", NULL)); 5896718818eSStefano Zampini #endif 5909566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", NULL)); 5919566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", NULL)); 5929566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", NULL)); 5939566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", NULL)); 5949566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", NULL)); 5959566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", NULL)); 5969566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", NULL)); 5979566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", NULL)); 5989566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", NULL)); 5999566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", NULL)); 600f8103e6bSStefano Zampini 601f8103e6bSStefano Zampini PetscCall(PetscObjectCompose((PetscObject)mat, "DiagonalBlock", NULL)); 6023a40ed3dSBarry Smith PetscFunctionReturn(0); 6038965ea79SLois Curfman McInnes } 60439ddd567SLois Curfman McInnes 60552c5f739Sprj- PETSC_INTERN PetscErrorCode MatView_SeqDense(Mat, PetscViewer); 60652c5f739Sprj- 6079804daf3SBarry Smith #include <petscdraw.h> 6089371c9d4SSatish Balay static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat, PetscViewer viewer) { 60939ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 610616b8fbbSStefano Zampini PetscMPIInt rank; 61119fd82e9SBarry Smith PetscViewerType vtype; 612ace3abfcSBarry Smith PetscBool iascii, isdraw; 613b0a32e0cSBarry Smith PetscViewer sviewer; 614f3ef73ceSBarry Smith PetscViewerFormat format; 6158965ea79SLois Curfman McInnes 6163a40ed3dSBarry Smith PetscFunctionBegin; 6179566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat), &rank)); 6189566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 6199566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 62032077d6dSBarry Smith if (iascii) { 6219566063dSJacob Faibussowitsch PetscCall(PetscViewerGetType(viewer, &vtype)); 6229566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 623456192e2SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 6244e220ebcSLois Curfman McInnes MatInfo info; 6259566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mat, MAT_LOCAL, &info)); 6269566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 6279371c9d4SSatish Balay PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, " [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n", rank, mat->rmap->n, (PetscInt)info.nz_used, (PetscInt)info.nz_allocated, 6289371c9d4SSatish Balay (PetscInt)info.memory)); 6299566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 6309566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 6316f08ad05SPierre Jolivet if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx, viewer)); 6323a40ed3dSBarry Smith PetscFunctionReturn(0); 633fb9695e5SSatish Balay } else if (format == PETSC_VIEWER_ASCII_INFO) { 6343a40ed3dSBarry Smith PetscFunctionReturn(0); 6358965ea79SLois Curfman McInnes } 636f1af5d2fSBarry Smith } else if (isdraw) { 637b0a32e0cSBarry Smith PetscDraw draw; 638ace3abfcSBarry Smith PetscBool isnull; 639f1af5d2fSBarry Smith 6409566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw)); 6419566063dSJacob Faibussowitsch PetscCall(PetscDrawIsNull(draw, &isnull)); 642f1af5d2fSBarry Smith if (isnull) PetscFunctionReturn(0); 643f1af5d2fSBarry Smith } 64477ed5343SBarry Smith 6457da1fb6eSBarry Smith { 6468965ea79SLois Curfman McInnes /* assemble the entire matrix onto first processor. */ 6478965ea79SLois Curfman McInnes Mat A; 648d0f46423SBarry Smith PetscInt M = mat->rmap->N, N = mat->cmap->N, m, row, i, nz; 649ba8c8a56SBarry Smith PetscInt *cols; 650ba8c8a56SBarry Smith PetscScalar *vals; 6518965ea79SLois Curfman McInnes 6529566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &A)); 653dd400576SPatrick Sanan if (rank == 0) { 6549566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, M, N, M, N)); 6553a40ed3dSBarry Smith } else { 6569566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, 0, 0, M, N)); 6578965ea79SLois Curfman McInnes } 6587adad957SLisandro Dalcin /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */ 6599566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATMPIDENSE)); 6609566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 6619566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)mat, (PetscObject)A)); 6628965ea79SLois Curfman McInnes 66339ddd567SLois Curfman McInnes /* Copy the matrix ... This isn't the most efficient means, 66439ddd567SLois Curfman McInnes but it's quick for now */ 66551022da4SBarry Smith A->insertmode = INSERT_VALUES; 6662205254eSKarl Rupp 6672205254eSKarl Rupp row = mat->rmap->rstart; 6682205254eSKarl Rupp m = mdn->A->rmap->n; 6698965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 6709566063dSJacob Faibussowitsch PetscCall(MatGetRow_MPIDense(mat, row, &nz, &cols, &vals)); 6719566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(A, 1, &row, nz, cols, vals, INSERT_VALUES)); 6729566063dSJacob Faibussowitsch PetscCall(MatRestoreRow_MPIDense(mat, row, &nz, &cols, &vals)); 67339ddd567SLois Curfman McInnes row++; 6748965ea79SLois Curfman McInnes } 6758965ea79SLois Curfman McInnes 6769566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 6779566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 6789566063dSJacob Faibussowitsch PetscCall(PetscViewerGetSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 679dd400576SPatrick Sanan if (rank == 0) { 6809566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense *)(A->data))->A, ((PetscObject)mat)->name)); 6819566063dSJacob Faibussowitsch PetscCall(MatView_SeqDense(((Mat_MPIDense *)(A->data))->A, sviewer)); 6828965ea79SLois Curfman McInnes } 6839566063dSJacob Faibussowitsch PetscCall(PetscViewerRestoreSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 6849566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 6859566063dSJacob Faibussowitsch PetscCall(MatDestroy(&A)); 6868965ea79SLois Curfman McInnes } 6873a40ed3dSBarry Smith PetscFunctionReturn(0); 6888965ea79SLois Curfman McInnes } 6898965ea79SLois Curfman McInnes 6909371c9d4SSatish Balay PetscErrorCode MatView_MPIDense(Mat mat, PetscViewer viewer) { 691ace3abfcSBarry Smith PetscBool iascii, isbinary, isdraw, issocket; 6928965ea79SLois Curfman McInnes 693433994e6SBarry Smith PetscFunctionBegin; 6949566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 6959566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 6969566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSOCKET, &issocket)); 6979566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 6980f5bd95cSBarry Smith 69932077d6dSBarry Smith if (iascii || issocket || isdraw) { 7009566063dSJacob Faibussowitsch PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat, viewer)); 7011baa6e33SBarry Smith } else if (isbinary) PetscCall(MatView_Dense_Binary(mat, viewer)); 7023a40ed3dSBarry Smith PetscFunctionReturn(0); 7038965ea79SLois Curfman McInnes } 7048965ea79SLois Curfman McInnes 7059371c9d4SSatish Balay PetscErrorCode MatGetInfo_MPIDense(Mat A, MatInfoType flag, MatInfo *info) { 7063501a2bdSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 7073501a2bdSLois Curfman McInnes Mat mdn = mat->A; 7083966268fSBarry Smith PetscLogDouble isend[5], irecv[5]; 7098965ea79SLois Curfman McInnes 7103a40ed3dSBarry Smith PetscFunctionBegin; 7114e220ebcSLois Curfman McInnes info->block_size = 1.0; 7122205254eSKarl Rupp 7139566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mdn, MAT_LOCAL, info)); 7142205254eSKarl Rupp 7159371c9d4SSatish Balay isend[0] = info->nz_used; 7169371c9d4SSatish Balay isend[1] = info->nz_allocated; 7179371c9d4SSatish Balay isend[2] = info->nz_unneeded; 7189371c9d4SSatish Balay isend[3] = info->memory; 7199371c9d4SSatish Balay isend[4] = info->mallocs; 7208965ea79SLois Curfman McInnes if (flag == MAT_LOCAL) { 7214e220ebcSLois Curfman McInnes info->nz_used = isend[0]; 7224e220ebcSLois Curfman McInnes info->nz_allocated = isend[1]; 7234e220ebcSLois Curfman McInnes info->nz_unneeded = isend[2]; 7244e220ebcSLois Curfman McInnes info->memory = isend[3]; 7254e220ebcSLois Curfman McInnes info->mallocs = isend[4]; 7268965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_MAX) { 7271c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_MAX, PetscObjectComm((PetscObject)A))); 7282205254eSKarl Rupp 7294e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 7304e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 7314e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 7324e220ebcSLois Curfman McInnes info->memory = irecv[3]; 7334e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 7348965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_SUM) { 7351c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_SUM, PetscObjectComm((PetscObject)A))); 7362205254eSKarl Rupp 7374e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 7384e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 7394e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 7404e220ebcSLois Curfman McInnes info->memory = irecv[3]; 7414e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 7428965ea79SLois Curfman McInnes } 7434e220ebcSLois Curfman McInnes info->fill_ratio_given = 0; /* no parallel LU/ILU/Cholesky */ 7444e220ebcSLois Curfman McInnes info->fill_ratio_needed = 0; 7454e220ebcSLois Curfman McInnes info->factor_mallocs = 0; 7463a40ed3dSBarry Smith PetscFunctionReturn(0); 7478965ea79SLois Curfman McInnes } 7488965ea79SLois Curfman McInnes 7499371c9d4SSatish Balay PetscErrorCode MatSetOption_MPIDense(Mat A, MatOption op, PetscBool flg) { 75039ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 7518965ea79SLois Curfman McInnes 7523a40ed3dSBarry Smith PetscFunctionBegin; 75312c028f9SKris Buschelman switch (op) { 754512a5fc5SBarry Smith case MAT_NEW_NONZERO_LOCATIONS: 75512c028f9SKris Buschelman case MAT_NEW_NONZERO_LOCATION_ERR: 75612c028f9SKris Buschelman case MAT_NEW_NONZERO_ALLOCATION_ERR: 75743674050SBarry Smith MatCheckPreallocated(A, 1); 7589566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 75912c028f9SKris Buschelman break; 76012c028f9SKris Buschelman case MAT_ROW_ORIENTED: 76143674050SBarry Smith MatCheckPreallocated(A, 1); 7624e0d8c25SBarry Smith a->roworiented = flg; 7639566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 76412c028f9SKris Buschelman break; 7658c78258cSHong Zhang case MAT_FORCE_DIAGONAL_ENTRIES: 76613fa8e87SLisandro Dalcin case MAT_KEEP_NONZERO_PATTERN: 76712c028f9SKris Buschelman case MAT_USE_HASH_TABLE: 7689371c9d4SSatish Balay case MAT_SORTED_FULL: PetscCall(PetscInfo(A, "Option %s ignored\n", MatOptions[op])); break; 7699371c9d4SSatish Balay case MAT_IGNORE_OFF_PROC_ENTRIES: a->donotstash = flg; break; 77077e54ba9SKris Buschelman case MAT_SYMMETRIC: 77177e54ba9SKris Buschelman case MAT_STRUCTURALLY_SYMMETRIC: 7729a4540c5SBarry Smith case MAT_HERMITIAN: 7739a4540c5SBarry Smith case MAT_SYMMETRY_ETERNAL: 774b94d7dedSBarry Smith case MAT_STRUCTURAL_SYMMETRY_ETERNAL: 775b94d7dedSBarry Smith case MAT_SPD: 776600fe468SBarry Smith case MAT_IGNORE_LOWER_TRIANGULAR: 7775d7aebe8SStefano Zampini case MAT_IGNORE_ZERO_ENTRIES: 778b94d7dedSBarry Smith case MAT_SPD_ETERNAL: 779b94d7dedSBarry Smith /* if the diagonal matrix is square it inherits some of the properties above */ 7809566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Option %s ignored\n", MatOptions[op])); 78177e54ba9SKris Buschelman break; 7829371c9d4SSatish Balay default: SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "unknown option %s", MatOptions[op]); 7833a40ed3dSBarry Smith } 7843a40ed3dSBarry Smith PetscFunctionReturn(0); 7858965ea79SLois Curfman McInnes } 7868965ea79SLois Curfman McInnes 7879371c9d4SSatish Balay PetscErrorCode MatDiagonalScale_MPIDense(Mat A, Vec ll, Vec rr) { 7885b2fa520SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 789637a0070SStefano Zampini const PetscScalar *l; 790637a0070SStefano Zampini PetscScalar x, *v, *vv, *r; 791637a0070SStefano Zampini PetscInt i, j, s2a, s3a, s2, s3, m = mdn->A->rmap->n, n = mdn->A->cmap->n, lda; 7925b2fa520SLois Curfman McInnes 7935b2fa520SLois Curfman McInnes PetscFunctionBegin; 7949566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(mdn->A, &vv)); 7959566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mdn->A, &lda)); 7969566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &s2, &s3)); 7975b2fa520SLois Curfman McInnes if (ll) { 7989566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(ll, &s2a)); 79908401ef6SPierre Jolivet PetscCheck(s2a == s2, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2); 8009566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(ll, &l)); 8015b2fa520SLois Curfman McInnes for (i = 0; i < m; i++) { 8025b2fa520SLois Curfman McInnes x = l[i]; 803637a0070SStefano Zampini v = vv + i; 8049371c9d4SSatish Balay for (j = 0; j < n; j++) { 8059371c9d4SSatish Balay (*v) *= x; 8069371c9d4SSatish Balay v += lda; 8079371c9d4SSatish Balay } 8085b2fa520SLois Curfman McInnes } 8099566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(ll, &l)); 8109566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 8115b2fa520SLois Curfman McInnes } 8125b2fa520SLois Curfman McInnes if (rr) { 813637a0070SStefano Zampini const PetscScalar *ar; 814637a0070SStefano Zampini 8159566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(rr, &s3a)); 81608401ef6SPierre Jolivet PetscCheck(s3a == s3, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3); 8179566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(rr, &ar)); 8186f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 8199566063dSJacob Faibussowitsch PetscCall(VecGetArray(mdn->lvec, &r)); 8209566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 8219566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 8229566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(rr, &ar)); 8235b2fa520SLois Curfman McInnes for (i = 0; i < n; i++) { 8245b2fa520SLois Curfman McInnes x = r[i]; 825637a0070SStefano Zampini v = vv + i * lda; 8262205254eSKarl Rupp for (j = 0; j < m; j++) (*v++) *= x; 8275b2fa520SLois Curfman McInnes } 8289566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(mdn->lvec, &r)); 8299566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 8305b2fa520SLois Curfman McInnes } 8319566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(mdn->A, &vv)); 8325b2fa520SLois Curfman McInnes PetscFunctionReturn(0); 8335b2fa520SLois Curfman McInnes } 8345b2fa520SLois Curfman McInnes 8359371c9d4SSatish Balay PetscErrorCode MatNorm_MPIDense(Mat A, NormType type, PetscReal *nrm) { 8363501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 83713f74950SBarry Smith PetscInt i, j; 838616b8fbbSStefano Zampini PetscMPIInt size; 839329f5518SBarry Smith PetscReal sum = 0.0; 840637a0070SStefano Zampini const PetscScalar *av, *v; 8413501a2bdSLois Curfman McInnes 8423a40ed3dSBarry Smith PetscFunctionBegin; 8439566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, &av)); 844637a0070SStefano Zampini v = av; 8459566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 846616b8fbbSStefano Zampini if (size == 1) { 8479566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, nrm)); 8483501a2bdSLois Curfman McInnes } else { 8493501a2bdSLois Curfman McInnes if (type == NORM_FROBENIUS) { 850d0f46423SBarry Smith for (i = 0; i < mdn->A->cmap->n * mdn->A->rmap->n; i++) { 8519371c9d4SSatish Balay sum += PetscRealPart(PetscConj(*v) * (*v)); 8529371c9d4SSatish Balay v++; 8533501a2bdSLois Curfman McInnes } 8541c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&sum, nrm, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 8558f1a2a5eSBarry Smith *nrm = PetscSqrtReal(*nrm); 8569566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * mdn->A->cmap->n * mdn->A->rmap->n)); 8573a40ed3dSBarry Smith } else if (type == NORM_1) { 858329f5518SBarry Smith PetscReal *tmp, *tmp2; 8599566063dSJacob Faibussowitsch PetscCall(PetscCalloc2(A->cmap->N, &tmp, A->cmap->N, &tmp2)); 860064f8208SBarry Smith *nrm = 0.0; 861637a0070SStefano Zampini v = av; 862d0f46423SBarry Smith for (j = 0; j < mdn->A->cmap->n; j++) { 863d0f46423SBarry Smith for (i = 0; i < mdn->A->rmap->n; i++) { 8649371c9d4SSatish Balay tmp[j] += PetscAbsScalar(*v); 8659371c9d4SSatish Balay v++; 8663501a2bdSLois Curfman McInnes } 8673501a2bdSLois Curfman McInnes } 8681c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(tmp, tmp2, A->cmap->N, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 869d0f46423SBarry Smith for (j = 0; j < A->cmap->N; j++) { 870064f8208SBarry Smith if (tmp2[j] > *nrm) *nrm = tmp2[j]; 8713501a2bdSLois Curfman McInnes } 8729566063dSJacob Faibussowitsch PetscCall(PetscFree2(tmp, tmp2)); 8739566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(A->cmap->n * A->rmap->n)); 8743a40ed3dSBarry Smith } else if (type == NORM_INFINITY) { /* max row norm */ 875329f5518SBarry Smith PetscReal ntemp; 8769566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, &ntemp)); 8771c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&ntemp, nrm, 1, MPIU_REAL, MPIU_MAX, PetscObjectComm((PetscObject)A))); 878ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for two norm"); 8793501a2bdSLois Curfman McInnes } 8809566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, &av)); 8813a40ed3dSBarry Smith PetscFunctionReturn(0); 8823501a2bdSLois Curfman McInnes } 8833501a2bdSLois Curfman McInnes 8849371c9d4SSatish Balay PetscErrorCode MatTranspose_MPIDense(Mat A, MatReuse reuse, Mat *matout) { 8853501a2bdSLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 8863501a2bdSLois Curfman McInnes Mat B; 887d0f46423SBarry Smith PetscInt M = A->rmap->N, N = A->cmap->N, m, n, *rwork, rstart = A->rmap->rstart; 888637a0070SStefano Zampini PetscInt j, i, lda; 88987828ca2SBarry Smith PetscScalar *v; 8903501a2bdSLois Curfman McInnes 8913a40ed3dSBarry Smith PetscFunctionBegin; 8927fb60732SBarry Smith if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *matout)); 893cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { 8949566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 8959566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->cmap->n, A->rmap->n, N, M)); 8969566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)A)->type_name)); 8979566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(B, NULL)); 898637a0070SStefano Zampini } else B = *matout; 8993501a2bdSLois Curfman McInnes 9009371c9d4SSatish Balay m = a->A->rmap->n; 9019371c9d4SSatish Balay n = a->A->cmap->n; 9029566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)&v)); 9039566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 9049566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &rwork)); 9053501a2bdSLois Curfman McInnes for (i = 0; i < m; i++) rwork[i] = rstart + i; 9061acff37aSSatish Balay for (j = 0; j < n; j++) { 9079566063dSJacob Faibussowitsch PetscCall(MatSetValues(B, 1, &j, m, rwork, v, INSERT_VALUES)); 908637a0070SStefano Zampini v += lda; 9093501a2bdSLois Curfman McInnes } 9109566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)&v)); 9119566063dSJacob Faibussowitsch PetscCall(PetscFree(rwork)); 9129566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 9139566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 914cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) { 9153501a2bdSLois Curfman McInnes *matout = B; 9163501a2bdSLois Curfman McInnes } else { 9179566063dSJacob Faibussowitsch PetscCall(MatHeaderMerge(A, &B)); 9183501a2bdSLois Curfman McInnes } 9193a40ed3dSBarry Smith PetscFunctionReturn(0); 920096963f5SLois Curfman McInnes } 921096963f5SLois Curfman McInnes 9226849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat, MatDuplicateOption, Mat *); 92352c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat, PetscScalar); 9248965ea79SLois Curfman McInnes 9259371c9d4SSatish Balay PetscErrorCode MatSetUp_MPIDense(Mat A) { 926273d9f13SBarry Smith PetscFunctionBegin; 9279566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 9289566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 92948a46eb9SPierre Jolivet if (!A->preallocated) PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 930273d9f13SBarry Smith PetscFunctionReturn(0); 931273d9f13SBarry Smith } 932273d9f13SBarry Smith 9339371c9d4SSatish Balay PetscErrorCode MatAXPY_MPIDense(Mat Y, PetscScalar alpha, Mat X, MatStructure str) { 934488007eeSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)Y->data, *B = (Mat_MPIDense *)X->data; 935488007eeSBarry Smith 936488007eeSBarry Smith PetscFunctionBegin; 9379566063dSJacob Faibussowitsch PetscCall(MatAXPY(A->A, alpha, B->A, str)); 938488007eeSBarry Smith PetscFunctionReturn(0); 939488007eeSBarry Smith } 940488007eeSBarry Smith 9419371c9d4SSatish Balay PetscErrorCode MatConjugate_MPIDense(Mat mat) { 942ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 943ba337c44SJed Brown 944ba337c44SJed Brown PetscFunctionBegin; 9459566063dSJacob Faibussowitsch PetscCall(MatConjugate(a->A)); 946ba337c44SJed Brown PetscFunctionReturn(0); 947ba337c44SJed Brown } 948ba337c44SJed Brown 9499371c9d4SSatish Balay PetscErrorCode MatRealPart_MPIDense(Mat A) { 950ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 951ba337c44SJed Brown 952ba337c44SJed Brown PetscFunctionBegin; 9539566063dSJacob Faibussowitsch PetscCall(MatRealPart(a->A)); 954ba337c44SJed Brown PetscFunctionReturn(0); 955ba337c44SJed Brown } 956ba337c44SJed Brown 9579371c9d4SSatish Balay PetscErrorCode MatImaginaryPart_MPIDense(Mat A) { 958ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 959ba337c44SJed Brown 960ba337c44SJed Brown PetscFunctionBegin; 9619566063dSJacob Faibussowitsch PetscCall(MatImaginaryPart(a->A)); 962ba337c44SJed Brown PetscFunctionReturn(0); 963ba337c44SJed Brown } 964ba337c44SJed Brown 9659371c9d4SSatish Balay static PetscErrorCode MatGetColumnVector_MPIDense(Mat A, Vec v, PetscInt col) { 966637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 96749a6ff4bSBarry Smith 96849a6ff4bSBarry Smith PetscFunctionBegin; 96928b400f6SJacob Faibussowitsch PetscCheck(a->A, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing local matrix"); 97028b400f6SJacob Faibussowitsch PetscCheck(a->A->ops->getcolumnvector, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing get column operation"); 9719566063dSJacob Faibussowitsch PetscCall((*a->A->ops->getcolumnvector)(a->A, v, col)); 97249a6ff4bSBarry Smith PetscFunctionReturn(0); 97349a6ff4bSBarry Smith } 97449a6ff4bSBarry Smith 975857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat, PetscInt, PetscReal *); 97652c5f739Sprj- 9779371c9d4SSatish Balay PetscErrorCode MatGetColumnReductions_MPIDense(Mat A, PetscInt type, PetscReal *reductions) { 978a873a8cdSSam Reynolds PetscInt i, m, n; 9790716a85fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 9800716a85fSBarry Smith PetscReal *work; 9810716a85fSBarry Smith 9820716a85fSBarry Smith PetscFunctionBegin; 9839566063dSJacob Faibussowitsch PetscCall(MatGetSize(A, &m, &n)); 9849566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &work)); 985857cbf51SRichard Tran Mills if (type == REDUCTION_MEAN_REALPART) { 9869566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_REALPART, work)); 987857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_IMAGINARYPART) { 9889566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_IMAGINARYPART, work)); 989a873a8cdSSam Reynolds } else { 9909566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, type, work)); 991a873a8cdSSam Reynolds } 992857cbf51SRichard Tran Mills if (type == NORM_2) { 9930716a85fSBarry Smith for (i = 0; i < n; i++) work[i] *= work[i]; 9940716a85fSBarry Smith } 995857cbf51SRichard Tran Mills if (type == NORM_INFINITY) { 9961c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(work, reductions, n, MPIU_REAL, MPIU_MAX, A->hdr.comm)); 9970716a85fSBarry Smith } else { 9981c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(work, reductions, n, MPIU_REAL, MPIU_SUM, A->hdr.comm)); 9990716a85fSBarry Smith } 10009566063dSJacob Faibussowitsch PetscCall(PetscFree(work)); 1001857cbf51SRichard Tran Mills if (type == NORM_2) { 1002a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] = PetscSqrtReal(reductions[i]); 1003857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) { 1004a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] /= m; 10050716a85fSBarry Smith } 10060716a85fSBarry Smith PetscFunctionReturn(0); 10070716a85fSBarry Smith } 10080716a85fSBarry Smith 1009637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 10109371c9d4SSatish Balay PetscErrorCode MatShift_MPIDenseCUDA(Mat A, PetscScalar alpha) { 1011126e4e93SJose E. Roman PetscScalar *da; 1012126e4e93SJose E. Roman PetscInt lda; 1013126e4e93SJose E. Roman 1014126e4e93SJose E. Roman PetscFunctionBegin; 1015126e4e93SJose E. Roman PetscCall(MatDenseCUDAGetArray(A, &da)); 1016126e4e93SJose E. Roman PetscCall(MatDenseGetLDA(A, &lda)); 1017126e4e93SJose E. Roman PetscCall(PetscInfo(A, "Performing Shift on backend\n")); 1018126e4e93SJose E. Roman PetscCall(MatShift_DenseCUDA_Private(da, alpha, lda, A->rmap->rstart, A->rmap->rend, A->cmap->N)); 1019126e4e93SJose E. Roman PetscCall(MatDenseCUDARestoreArray(A, &da)); 1020126e4e93SJose E. Roman PetscFunctionReturn(0); 1021126e4e93SJose E. Roman } 1022126e4e93SJose E. Roman 10239371c9d4SSatish Balay static PetscErrorCode MatDenseGetColumnVec_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) { 10246947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10256947451fSStefano Zampini PetscInt lda; 10266947451fSStefano Zampini 10276947451fSStefano Zampini PetscFunctionBegin; 102828b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 102928b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 10306947451fSStefano Zampini if (!a->cvec) { 10319566063dSJacob Faibussowitsch PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec)); 10329566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->cvec)); 10336947451fSStefano Zampini } 10346947451fSStefano Zampini a->vecinuse = col + 1; 10359566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 10369566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArray(a->A, (PetscScalar **)&a->ptrinuse)); 10379566063dSJacob Faibussowitsch PetscCall(VecCUDAPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda)); 10386947451fSStefano Zampini *v = a->cvec; 10396947451fSStefano Zampini PetscFunctionReturn(0); 10406947451fSStefano Zampini } 10416947451fSStefano Zampini 10429371c9d4SSatish Balay static PetscErrorCode MatDenseRestoreColumnVec_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) { 10436947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10446947451fSStefano Zampini 10456947451fSStefano Zampini PetscFunctionBegin; 104628b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 104728b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector"); 10486947451fSStefano Zampini a->vecinuse = 0; 10499566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArray(a->A, (PetscScalar **)&a->ptrinuse)); 10509566063dSJacob Faibussowitsch PetscCall(VecCUDAResetArray(a->cvec)); 1051742765d3SMatthew Knepley if (v) *v = NULL; 10526947451fSStefano Zampini PetscFunctionReturn(0); 10536947451fSStefano Zampini } 10546947451fSStefano Zampini 10559371c9d4SSatish Balay static PetscErrorCode MatDenseGetColumnVecRead_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) { 10566947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10576947451fSStefano Zampini PetscInt lda; 10586947451fSStefano Zampini 10596947451fSStefano Zampini PetscFunctionBegin; 106028b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 106128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 10626947451fSStefano Zampini if (!a->cvec) { 10639566063dSJacob Faibussowitsch PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec)); 10649566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->cvec)); 10656947451fSStefano Zampini } 10666947451fSStefano Zampini a->vecinuse = col + 1; 10679566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 10689566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArrayRead(a->A, &a->ptrinuse)); 10699566063dSJacob Faibussowitsch PetscCall(VecCUDAPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda)); 10709566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(a->cvec)); 10716947451fSStefano Zampini *v = a->cvec; 10726947451fSStefano Zampini PetscFunctionReturn(0); 10736947451fSStefano Zampini } 10746947451fSStefano Zampini 10759371c9d4SSatish Balay static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) { 10766947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10776947451fSStefano Zampini 10786947451fSStefano Zampini PetscFunctionBegin; 107928b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 108028b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 10816947451fSStefano Zampini a->vecinuse = 0; 10829566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArrayRead(a->A, &a->ptrinuse)); 10839566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(a->cvec)); 10849566063dSJacob Faibussowitsch PetscCall(VecCUDAResetArray(a->cvec)); 1085742765d3SMatthew Knepley if (v) *v = NULL; 10866947451fSStefano Zampini PetscFunctionReturn(0); 10876947451fSStefano Zampini } 10886947451fSStefano Zampini 10899371c9d4SSatish Balay static PetscErrorCode MatDenseGetColumnVecWrite_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) { 10906947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10916947451fSStefano Zampini PetscInt lda; 10926947451fSStefano Zampini 10936947451fSStefano Zampini PetscFunctionBegin; 109428b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 109528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 10966947451fSStefano Zampini if (!a->cvec) { 10979566063dSJacob Faibussowitsch PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec)); 10989566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->cvec)); 10996947451fSStefano Zampini } 11006947451fSStefano Zampini a->vecinuse = col + 1; 11019566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 11029566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 11039566063dSJacob Faibussowitsch PetscCall(VecCUDAPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda)); 11046947451fSStefano Zampini *v = a->cvec; 11056947451fSStefano Zampini PetscFunctionReturn(0); 11066947451fSStefano Zampini } 11076947451fSStefano Zampini 11089371c9d4SSatish Balay static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) { 11096947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 11106947451fSStefano Zampini 11116947451fSStefano Zampini PetscFunctionBegin; 111228b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 111328b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 11146947451fSStefano Zampini a->vecinuse = 0; 11159566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 11169566063dSJacob Faibussowitsch PetscCall(VecCUDAResetArray(a->cvec)); 1117742765d3SMatthew Knepley if (v) *v = NULL; 11186947451fSStefano Zampini PetscFunctionReturn(0); 11196947451fSStefano Zampini } 11206947451fSStefano Zampini 11219371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAPlaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a) { 1122637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1123637a0070SStefano Zampini 1124637a0070SStefano Zampini PetscFunctionBegin; 112528b400f6SJacob Faibussowitsch PetscCheck(!l->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 112628b400f6SJacob Faibussowitsch PetscCheck(!l->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 11279566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAPlaceArray(l->A, a)); 1128637a0070SStefano Zampini PetscFunctionReturn(0); 1129637a0070SStefano Zampini } 1130637a0070SStefano Zampini 11319371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAResetArray_MPIDenseCUDA(Mat A) { 1132637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1133637a0070SStefano Zampini 1134637a0070SStefano Zampini PetscFunctionBegin; 113528b400f6SJacob Faibussowitsch PetscCheck(!l->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 113628b400f6SJacob Faibussowitsch PetscCheck(!l->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 11379566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAResetArray(l->A)); 1138637a0070SStefano Zampini PetscFunctionReturn(0); 1139637a0070SStefano Zampini } 1140637a0070SStefano Zampini 11419371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAReplaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a) { 1142d5ea218eSStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1143d5ea218eSStefano Zampini 1144d5ea218eSStefano Zampini PetscFunctionBegin; 114528b400f6SJacob Faibussowitsch PetscCheck(!l->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 114628b400f6SJacob Faibussowitsch PetscCheck(!l->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 11479566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAReplaceArray(l->A, a)); 1148d5ea218eSStefano Zampini PetscFunctionReturn(0); 1149d5ea218eSStefano Zampini } 1150d5ea218eSStefano Zampini 11519371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAGetArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a) { 1152637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1153637a0070SStefano Zampini 1154637a0070SStefano Zampini PetscFunctionBegin; 11559566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArrayWrite(l->A, a)); 1156637a0070SStefano Zampini PetscFunctionReturn(0); 1157637a0070SStefano Zampini } 1158637a0070SStefano Zampini 11599371c9d4SSatish Balay static PetscErrorCode MatDenseCUDARestoreArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a) { 1160637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1161637a0070SStefano Zampini 1162637a0070SStefano Zampini PetscFunctionBegin; 11639566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArrayWrite(l->A, a)); 1164637a0070SStefano Zampini PetscFunctionReturn(0); 1165637a0070SStefano Zampini } 1166637a0070SStefano Zampini 11679371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAGetArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a) { 1168637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1169637a0070SStefano Zampini 1170637a0070SStefano Zampini PetscFunctionBegin; 11719566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArrayRead(l->A, a)); 1172637a0070SStefano Zampini PetscFunctionReturn(0); 1173637a0070SStefano Zampini } 1174637a0070SStefano Zampini 11759371c9d4SSatish Balay static PetscErrorCode MatDenseCUDARestoreArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a) { 1176637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1177637a0070SStefano Zampini 1178637a0070SStefano Zampini PetscFunctionBegin; 11799566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArrayRead(l->A, a)); 1180637a0070SStefano Zampini PetscFunctionReturn(0); 1181637a0070SStefano Zampini } 1182637a0070SStefano Zampini 11839371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAGetArray_MPIDenseCUDA(Mat A, PetscScalar **a) { 1184637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1185637a0070SStefano Zampini 1186637a0070SStefano Zampini PetscFunctionBegin; 11879566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArray(l->A, a)); 1188637a0070SStefano Zampini PetscFunctionReturn(0); 1189637a0070SStefano Zampini } 1190637a0070SStefano Zampini 11919371c9d4SSatish Balay static PetscErrorCode MatDenseCUDARestoreArray_MPIDenseCUDA(Mat A, PetscScalar **a) { 1192637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1193637a0070SStefano Zampini 1194637a0070SStefano Zampini PetscFunctionBegin; 11959566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArray(l->A, a)); 1196637a0070SStefano Zampini PetscFunctionReturn(0); 1197637a0070SStefano Zampini } 1198637a0070SStefano Zampini 11996947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat, PetscInt, Vec *); 12006947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat, PetscInt, Vec *); 12016947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat, PetscInt, Vec *); 12026947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat, PetscInt, Vec *); 12036947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat, PetscInt, Vec *); 12046947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat, PetscInt, Vec *); 12055ea7661aSPierre Jolivet static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat, Mat *); 12066947451fSStefano Zampini 12079371c9d4SSatish Balay static PetscErrorCode MatBindToCPU_MPIDenseCUDA(Mat mat, PetscBool bind) { 1208637a0070SStefano Zampini Mat_MPIDense *d = (Mat_MPIDense *)mat->data; 1209637a0070SStefano Zampini 1210637a0070SStefano Zampini PetscFunctionBegin; 121128b400f6SJacob Faibussowitsch PetscCheck(!d->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 121228b400f6SJacob Faibussowitsch PetscCheck(!d->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 12131baa6e33SBarry Smith if (d->A) PetscCall(MatBindToCPU(d->A, bind)); 1214637a0070SStefano Zampini mat->boundtocpu = bind; 12156947451fSStefano Zampini if (!bind) { 12166947451fSStefano Zampini PetscBool iscuda; 12176947451fSStefano Zampini 1218*3faff063SStefano Zampini PetscCall(PetscFree(mat->defaultrandtype)); 1219*3faff063SStefano Zampini PetscCall(PetscStrallocpy(PETSCCURAND, &mat->defaultrandtype)); 12209566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)d->cvec, VECMPICUDA, &iscuda)); 122148a46eb9SPierre Jolivet if (!iscuda) PetscCall(VecDestroy(&d->cvec)); 12229566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)d->cmat, MATMPIDENSECUDA, &iscuda)); 122348a46eb9SPierre Jolivet if (!iscuda) PetscCall(MatDestroy(&d->cmat)); 12249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDenseCUDA)); 12259566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDenseCUDA)); 12269566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDenseCUDA)); 12279566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDenseCUDA)); 12289566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDenseCUDA)); 12299566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDenseCUDA)); 1230126e4e93SJose E. Roman mat->ops->shift = MatShift_MPIDenseCUDA; 12316947451fSStefano Zampini } else { 1232*3faff063SStefano Zampini PetscCall(PetscFree(mat->defaultrandtype)); 1233*3faff063SStefano Zampini PetscCall(PetscStrallocpy(PETSCRANDER48, &mat->defaultrandtype)); 12349566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense)); 12359566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense)); 12369566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense)); 12379566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense)); 12389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense)); 12399566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense)); 1240126e4e93SJose E. Roman mat->ops->shift = MatShift_MPIDense; 1241616b8fbbSStefano Zampini } 12421baa6e33SBarry Smith if (d->cmat) PetscCall(MatBindToCPU(d->cmat, bind)); 1243637a0070SStefano Zampini PetscFunctionReturn(0); 1244637a0070SStefano Zampini } 1245637a0070SStefano Zampini 12469371c9d4SSatish Balay PetscErrorCode MatMPIDenseCUDASetPreallocation(Mat A, PetscScalar *d_data) { 1247637a0070SStefano Zampini Mat_MPIDense *d = (Mat_MPIDense *)A->data; 1248637a0070SStefano Zampini PetscBool iscuda; 1249637a0070SStefano Zampini 1250637a0070SStefano Zampini PetscFunctionBegin; 1251d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 12529566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda)); 1253637a0070SStefano Zampini if (!iscuda) PetscFunctionReturn(0); 12549566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 12559566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 1256637a0070SStefano Zampini if (!d->A) { 12579566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &d->A)); 12589566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)d->A)); 12599566063dSJacob Faibussowitsch PetscCall(MatSetSizes(d->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N)); 1260637a0070SStefano Zampini } 12619566063dSJacob Faibussowitsch PetscCall(MatSetType(d->A, MATSEQDENSECUDA)); 12629566063dSJacob Faibussowitsch PetscCall(MatSeqDenseCUDASetPreallocation(d->A, d_data)); 1263637a0070SStefano Zampini A->preallocated = PETSC_TRUE; 12646f08ad05SPierre Jolivet A->assembled = PETSC_TRUE; 1265637a0070SStefano Zampini PetscFunctionReturn(0); 1266637a0070SStefano Zampini } 1267637a0070SStefano Zampini #endif 1268637a0070SStefano Zampini 12699371c9d4SSatish Balay static PetscErrorCode MatSetRandom_MPIDense(Mat x, PetscRandom rctx) { 127073a71a0fSBarry Smith Mat_MPIDense *d = (Mat_MPIDense *)x->data; 127173a71a0fSBarry Smith 127273a71a0fSBarry Smith PetscFunctionBegin; 12739566063dSJacob Faibussowitsch PetscCall(MatSetRandom(d->A, rctx)); 1274*3faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 1275*3faff063SStefano Zampini x->offloadmask = d->A->offloadmask; 1276*3faff063SStefano Zampini #endif 127773a71a0fSBarry Smith PetscFunctionReturn(0); 127873a71a0fSBarry Smith } 127973a71a0fSBarry Smith 12809371c9d4SSatish Balay static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A, PetscBool *missing, PetscInt *d) { 12813b49f96aSBarry Smith PetscFunctionBegin; 12823b49f96aSBarry Smith *missing = PETSC_FALSE; 12833b49f96aSBarry Smith PetscFunctionReturn(0); 12843b49f96aSBarry Smith } 12853b49f96aSBarry Smith 12864222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1287cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12886718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1289a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12906718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat, Mat, PetscBool *); 12916718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat, PetscViewer); 1292cc48ffa7SToby Isaac 12938965ea79SLois Curfman McInnes /* -------------------------------------------------------------------*/ 129409dc0095SBarry Smith static struct _MatOps MatOps_Values = {MatSetValues_MPIDense, 129509dc0095SBarry Smith MatGetRow_MPIDense, 129609dc0095SBarry Smith MatRestoreRow_MPIDense, 129709dc0095SBarry Smith MatMult_MPIDense, 129897304618SKris Buschelman /* 4*/ MatMultAdd_MPIDense, 12997c922b88SBarry Smith MatMultTranspose_MPIDense, 13007c922b88SBarry Smith MatMultTransposeAdd_MPIDense, 1301f4259b30SLisandro Dalcin NULL, 1302f4259b30SLisandro Dalcin NULL, 1303f4259b30SLisandro Dalcin NULL, 1304f4259b30SLisandro Dalcin /* 10*/ NULL, 1305f4259b30SLisandro Dalcin NULL, 1306f4259b30SLisandro Dalcin NULL, 1307f4259b30SLisandro Dalcin NULL, 130809dc0095SBarry Smith MatTranspose_MPIDense, 130997304618SKris Buschelman /* 15*/ MatGetInfo_MPIDense, 13106e4ee0c6SHong Zhang MatEqual_MPIDense, 131109dc0095SBarry Smith MatGetDiagonal_MPIDense, 13125b2fa520SLois Curfman McInnes MatDiagonalScale_MPIDense, 131309dc0095SBarry Smith MatNorm_MPIDense, 131497304618SKris Buschelman /* 20*/ MatAssemblyBegin_MPIDense, 131509dc0095SBarry Smith MatAssemblyEnd_MPIDense, 131609dc0095SBarry Smith MatSetOption_MPIDense, 131709dc0095SBarry Smith MatZeroEntries_MPIDense, 1318d519adbfSMatthew Knepley /* 24*/ MatZeroRows_MPIDense, 1319f4259b30SLisandro Dalcin NULL, 1320f4259b30SLisandro Dalcin NULL, 1321f4259b30SLisandro Dalcin NULL, 1322f4259b30SLisandro Dalcin NULL, 13234994cf47SJed Brown /* 29*/ MatSetUp_MPIDense, 1324f4259b30SLisandro Dalcin NULL, 1325f4259b30SLisandro Dalcin NULL, 1326c56a70eeSBarry Smith MatGetDiagonalBlock_MPIDense, 1327f4259b30SLisandro Dalcin NULL, 1328d519adbfSMatthew Knepley /* 34*/ MatDuplicate_MPIDense, 1329f4259b30SLisandro Dalcin NULL, 1330f4259b30SLisandro Dalcin NULL, 1331f4259b30SLisandro Dalcin NULL, 1332f4259b30SLisandro Dalcin NULL, 1333d519adbfSMatthew Knepley /* 39*/ MatAXPY_MPIDense, 13347dae84e0SHong Zhang MatCreateSubMatrices_MPIDense, 1335f4259b30SLisandro Dalcin NULL, 133609dc0095SBarry Smith MatGetValues_MPIDense, 1337a76f77c3SStefano Zampini MatCopy_MPIDense, 1338f4259b30SLisandro Dalcin /* 44*/ NULL, 133909dc0095SBarry Smith MatScale_MPIDense, 13402f605a99SJose E. Roman MatShift_MPIDense, 1341f4259b30SLisandro Dalcin NULL, 1342f4259b30SLisandro Dalcin NULL, 134373a71a0fSBarry Smith /* 49*/ MatSetRandom_MPIDense, 1344f4259b30SLisandro Dalcin NULL, 1345f4259b30SLisandro Dalcin NULL, 1346f4259b30SLisandro Dalcin NULL, 1347f4259b30SLisandro Dalcin NULL, 1348f4259b30SLisandro Dalcin /* 54*/ NULL, 1349f4259b30SLisandro Dalcin NULL, 1350f4259b30SLisandro Dalcin NULL, 1351f4259b30SLisandro Dalcin NULL, 1352f4259b30SLisandro Dalcin NULL, 13537dae84e0SHong Zhang /* 59*/ MatCreateSubMatrix_MPIDense, 1354b9b97703SBarry Smith MatDestroy_MPIDense, 1355b9b97703SBarry Smith MatView_MPIDense, 1356f4259b30SLisandro Dalcin NULL, 1357f4259b30SLisandro Dalcin NULL, 1358f4259b30SLisandro Dalcin /* 64*/ NULL, 1359f4259b30SLisandro Dalcin NULL, 1360f4259b30SLisandro Dalcin NULL, 1361f4259b30SLisandro Dalcin NULL, 1362f4259b30SLisandro Dalcin NULL, 1363f4259b30SLisandro Dalcin /* 69*/ NULL, 1364f4259b30SLisandro Dalcin NULL, 1365f4259b30SLisandro Dalcin NULL, 1366f4259b30SLisandro Dalcin NULL, 1367f4259b30SLisandro Dalcin NULL, 1368f4259b30SLisandro Dalcin /* 74*/ NULL, 1369f4259b30SLisandro Dalcin NULL, 1370f4259b30SLisandro Dalcin NULL, 1371f4259b30SLisandro Dalcin NULL, 1372f4259b30SLisandro Dalcin NULL, 1373f4259b30SLisandro Dalcin /* 79*/ NULL, 1374f4259b30SLisandro Dalcin NULL, 1375f4259b30SLisandro Dalcin NULL, 1376f4259b30SLisandro Dalcin NULL, 13775bba2384SShri Abhyankar /* 83*/ MatLoad_MPIDense, 1378f4259b30SLisandro Dalcin NULL, 1379f4259b30SLisandro Dalcin NULL, 1380f4259b30SLisandro Dalcin NULL, 1381f4259b30SLisandro Dalcin NULL, 1382f4259b30SLisandro Dalcin NULL, 1383f4259b30SLisandro Dalcin /* 89*/ NULL, 1384f4259b30SLisandro Dalcin NULL, 1385f4259b30SLisandro Dalcin NULL, 1386f4259b30SLisandro Dalcin NULL, 1387f4259b30SLisandro Dalcin NULL, 1388f4259b30SLisandro Dalcin /* 94*/ NULL, 1389f4259b30SLisandro Dalcin NULL, 13906718818eSStefano Zampini MatMatTransposeMultSymbolic_MPIDense_MPIDense, 1391cc48ffa7SToby Isaac MatMatTransposeMultNumeric_MPIDense_MPIDense, 1392f4259b30SLisandro Dalcin NULL, 13934222ddf1SHong Zhang /* 99*/ MatProductSetFromOptions_MPIDense, 1394f4259b30SLisandro Dalcin NULL, 1395f4259b30SLisandro Dalcin NULL, 1396ba337c44SJed Brown MatConjugate_MPIDense, 1397f4259b30SLisandro Dalcin NULL, 1398f4259b30SLisandro Dalcin /*104*/ NULL, 1399ba337c44SJed Brown MatRealPart_MPIDense, 1400ba337c44SJed Brown MatImaginaryPart_MPIDense, 1401f4259b30SLisandro Dalcin NULL, 1402f4259b30SLisandro Dalcin NULL, 1403f4259b30SLisandro Dalcin /*109*/ NULL, 1404f4259b30SLisandro Dalcin NULL, 1405f4259b30SLisandro Dalcin NULL, 140649a6ff4bSBarry Smith MatGetColumnVector_MPIDense, 14073b49f96aSBarry Smith MatMissingDiagonal_MPIDense, 1408f4259b30SLisandro Dalcin /*114*/ NULL, 1409f4259b30SLisandro Dalcin NULL, 1410f4259b30SLisandro Dalcin NULL, 1411f4259b30SLisandro Dalcin NULL, 1412f4259b30SLisandro Dalcin NULL, 1413f4259b30SLisandro Dalcin /*119*/ NULL, 1414f4259b30SLisandro Dalcin NULL, 1415f4259b30SLisandro Dalcin NULL, 1416f4259b30SLisandro Dalcin NULL, 1417f4259b30SLisandro Dalcin NULL, 1418f4259b30SLisandro Dalcin /*124*/ NULL, 1419a873a8cdSSam Reynolds MatGetColumnReductions_MPIDense, 1420f4259b30SLisandro Dalcin NULL, 1421f4259b30SLisandro Dalcin NULL, 1422f4259b30SLisandro Dalcin NULL, 1423f4259b30SLisandro Dalcin /*129*/ NULL, 1424f4259b30SLisandro Dalcin NULL, 14256718818eSStefano Zampini MatTransposeMatMultSymbolic_MPIDense_MPIDense, 1426cb20be35SHong Zhang MatTransposeMatMultNumeric_MPIDense_MPIDense, 1427f4259b30SLisandro Dalcin NULL, 1428f4259b30SLisandro Dalcin /*134*/ NULL, 1429f4259b30SLisandro Dalcin NULL, 1430f4259b30SLisandro Dalcin NULL, 1431f4259b30SLisandro Dalcin NULL, 1432f4259b30SLisandro Dalcin NULL, 1433f4259b30SLisandro Dalcin /*139*/ NULL, 1434f4259b30SLisandro Dalcin NULL, 1435f4259b30SLisandro Dalcin NULL, 1436f4259b30SLisandro Dalcin NULL, 1437f4259b30SLisandro Dalcin NULL, 14384222ddf1SHong Zhang MatCreateMPIMatConcatenateSeqMat_MPIDense, 1439f4259b30SLisandro Dalcin /*145*/ NULL, 1440f4259b30SLisandro Dalcin NULL, 144199a7f59eSMark Adams NULL, 144299a7f59eSMark Adams NULL, 14437fb60732SBarry Smith NULL, 14449371c9d4SSatish Balay /*150*/ NULL}; 14458965ea79SLois Curfman McInnes 14469371c9d4SSatish Balay PetscErrorCode MatMPIDenseSetPreallocation_MPIDense(Mat mat, PetscScalar *data) { 1447637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 1448637a0070SStefano Zampini PetscBool iscuda; 1449a23d5eceSKris Buschelman 1450a23d5eceSKris Buschelman PetscFunctionBegin; 145128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 14529566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->rmap)); 14539566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->cmap)); 1454637a0070SStefano Zampini if (!a->A) { 14559566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 14569566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)mat, (PetscObject)a->A)); 14579566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, mat->rmap->n, mat->cmap->N, mat->rmap->n, mat->cmap->N)); 1458637a0070SStefano Zampini } 14599566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSECUDA, &iscuda)); 14609566063dSJacob Faibussowitsch PetscCall(MatSetType(a->A, iscuda ? MATSEQDENSECUDA : MATSEQDENSE)); 14619566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(a->A, data)); 1462*3faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 1463*3faff063SStefano Zampini mat->offloadmask = a->A->offloadmask; 1464*3faff063SStefano Zampini #endif 1465637a0070SStefano Zampini mat->preallocated = PETSC_TRUE; 14666f08ad05SPierre Jolivet mat->assembled = PETSC_TRUE; 1467a23d5eceSKris Buschelman PetscFunctionReturn(0); 1468a23d5eceSKris Buschelman } 1469a23d5eceSKris Buschelman 14709371c9d4SSatish Balay PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) { 14714e29119aSPierre Jolivet Mat B, C; 14724e29119aSPierre Jolivet 14734e29119aSPierre Jolivet PetscFunctionBegin; 14749566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMat(A, MAT_INITIAL_MATRIX, &C)); 14759566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqDense(C, MATSEQDENSE, MAT_INITIAL_MATRIX, &B)); 14769566063dSJacob Faibussowitsch PetscCall(MatDestroy(&C)); 14774e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14784e29119aSPierre Jolivet C = *newmat; 14794e29119aSPierre Jolivet } else C = NULL; 14809566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14819566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 14824e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 14839566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 14844e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 14854e29119aSPierre Jolivet PetscFunctionReturn(0); 14864e29119aSPierre Jolivet } 14874e29119aSPierre Jolivet 14889371c9d4SSatish Balay PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) { 14894e29119aSPierre Jolivet Mat B, C; 14904e29119aSPierre Jolivet 14914e29119aSPierre Jolivet PetscFunctionBegin; 14929566063dSJacob Faibussowitsch PetscCall(MatDenseGetLocalMatrix(A, &C)); 14939566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqDense_SeqAIJ(C, MATSEQAIJ, MAT_INITIAL_MATRIX, &B)); 14944e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14954e29119aSPierre Jolivet C = *newmat; 14964e29119aSPierre Jolivet } else C = NULL; 14979566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14989566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 14994e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 15009566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 15014e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 15024e29119aSPierre Jolivet PetscFunctionReturn(0); 15034e29119aSPierre Jolivet } 15044e29119aSPierre Jolivet 150565b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 15069371c9d4SSatish Balay PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) { 15078ea901baSHong Zhang Mat mat_elemental; 150832d7a744SHong Zhang PetscScalar *v; 150932d7a744SHong Zhang PetscInt m = A->rmap->n, N = A->cmap->N, rstart = A->rmap->rstart, i, *rows, *cols; 15108ea901baSHong Zhang 15118baccfbdSHong Zhang PetscFunctionBegin; 1512378336b6SHong Zhang if (reuse == MAT_REUSE_MATRIX) { 1513378336b6SHong Zhang mat_elemental = *newmat; 15149566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(*newmat)); 1515378336b6SHong Zhang } else { 15169566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental)); 15179566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat_elemental, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 15189566063dSJacob Faibussowitsch PetscCall(MatSetType(mat_elemental, MATELEMENTAL)); 15199566063dSJacob Faibussowitsch PetscCall(MatSetUp(mat_elemental)); 15209566063dSJacob Faibussowitsch PetscCall(MatSetOption(mat_elemental, MAT_ROW_ORIENTED, PETSC_FALSE)); 1521378336b6SHong Zhang } 1522378336b6SHong Zhang 15239566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &rows, N, &cols)); 152432d7a744SHong Zhang for (i = 0; i < N; i++) cols[i] = i; 152532d7a744SHong Zhang for (i = 0; i < m; i++) rows[i] = rstart + i; 15268ea901baSHong Zhang 1527637a0070SStefano Zampini /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */ 15289566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(A, &v)); 15299566063dSJacob Faibussowitsch PetscCall(MatSetValues(mat_elemental, m, rows, N, cols, v, ADD_VALUES)); 15309566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY)); 15319566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY)); 15329566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(A, &v)); 15339566063dSJacob Faibussowitsch PetscCall(PetscFree2(rows, cols)); 15348ea901baSHong Zhang 1535511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 15369566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &mat_elemental)); 15378ea901baSHong Zhang } else { 15388ea901baSHong Zhang *newmat = mat_elemental; 15398ea901baSHong Zhang } 15408baccfbdSHong Zhang PetscFunctionReturn(0); 15418baccfbdSHong Zhang } 154265b80a83SHong Zhang #endif 15438baccfbdSHong Zhang 15449371c9d4SSatish Balay static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A, PetscInt col, PetscScalar **vals) { 154586aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 154686aefd0dSHong Zhang 154786aefd0dSHong Zhang PetscFunctionBegin; 15489566063dSJacob Faibussowitsch PetscCall(MatDenseGetColumn(mat->A, col, vals)); 154986aefd0dSHong Zhang PetscFunctionReturn(0); 155086aefd0dSHong Zhang } 155186aefd0dSHong Zhang 15529371c9d4SSatish Balay static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A, PetscScalar **vals) { 155386aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 155486aefd0dSHong Zhang 155586aefd0dSHong Zhang PetscFunctionBegin; 15569566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreColumn(mat->A, vals)); 155786aefd0dSHong Zhang PetscFunctionReturn(0); 155886aefd0dSHong Zhang } 155986aefd0dSHong Zhang 15609371c9d4SSatish Balay PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm, Mat inmat, PetscInt n, MatReuse scall, Mat *outmat) { 156194e2cb23SJakub Kruzik Mat_MPIDense *mat; 156294e2cb23SJakub Kruzik PetscInt m, nloc, N; 156394e2cb23SJakub Kruzik 156494e2cb23SJakub Kruzik PetscFunctionBegin; 15659566063dSJacob Faibussowitsch PetscCall(MatGetSize(inmat, &m, &N)); 15669566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(inmat, NULL, &nloc)); 156794e2cb23SJakub Kruzik if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */ 156894e2cb23SJakub Kruzik PetscInt sum; 156994e2cb23SJakub Kruzik 157048a46eb9SPierre Jolivet if (n == PETSC_DECIDE) PetscCall(PetscSplitOwnership(comm, &n, &N)); 157194e2cb23SJakub Kruzik /* Check sum(n) = N */ 15721c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&n, &sum, 1, MPIU_INT, MPI_SUM, comm)); 157308401ef6SPierre Jolivet PetscCheck(sum == N, PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT, sum, N); 157494e2cb23SJakub Kruzik 15759566063dSJacob Faibussowitsch PetscCall(MatCreateDense(comm, m, n, PETSC_DETERMINE, N, NULL, outmat)); 15769566063dSJacob Faibussowitsch PetscCall(MatSetOption(*outmat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 157794e2cb23SJakub Kruzik } 157894e2cb23SJakub Kruzik 157994e2cb23SJakub Kruzik /* numeric phase */ 158094e2cb23SJakub Kruzik mat = (Mat_MPIDense *)(*outmat)->data; 15819566063dSJacob Faibussowitsch PetscCall(MatCopy(inmat, mat->A, SAME_NONZERO_PATTERN)); 158294e2cb23SJakub Kruzik PetscFunctionReturn(0); 158394e2cb23SJakub Kruzik } 158494e2cb23SJakub Kruzik 1585637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 15869371c9d4SSatish Balay PetscErrorCode MatConvert_MPIDenseCUDA_MPIDense(Mat M, MatType type, MatReuse reuse, Mat *newmat) { 1587637a0070SStefano Zampini Mat B; 1588637a0070SStefano Zampini Mat_MPIDense *m; 1589637a0070SStefano Zampini 1590637a0070SStefano Zampini PetscFunctionBegin; 1591637a0070SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 15929566063dSJacob Faibussowitsch PetscCall(MatDuplicate(M, MAT_COPY_VALUES, newmat)); 1593637a0070SStefano Zampini } else if (reuse == MAT_REUSE_MATRIX) { 15949566063dSJacob Faibussowitsch PetscCall(MatCopy(M, *newmat, SAME_NONZERO_PATTERN)); 1595637a0070SStefano Zampini } 1596637a0070SStefano Zampini 1597637a0070SStefano Zampini B = *newmat; 15989566063dSJacob Faibussowitsch PetscCall(MatBindToCPU_MPIDenseCUDA(B, PETSC_TRUE)); 15999566063dSJacob Faibussowitsch PetscCall(PetscFree(B->defaultvectype)); 16009566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(VECSTANDARD, &B->defaultvectype)); 16019566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)B, MATMPIDENSE)); 16029566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatConvert_mpidensecuda_mpidense_C", NULL)); 16039566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL)); 16049566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL)); 16059566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL)); 16069566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL)); 16079566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArray_C", NULL)); 16089566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArrayRead_C", NULL)); 16099566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArrayWrite_C", NULL)); 16109566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArray_C", NULL)); 16119566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArrayRead_C", NULL)); 16129566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArrayWrite_C", NULL)); 16139566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAPlaceArray_C", NULL)); 16149566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAResetArray_C", NULL)); 16159566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAReplaceArray_C", NULL)); 1616637a0070SStefano Zampini m = (Mat_MPIDense *)(B)->data; 161748a46eb9SPierre Jolivet if (m->A) PetscCall(MatConvert(m->A, MATSEQDENSE, MAT_INPLACE_MATRIX, &m->A)); 1618637a0070SStefano Zampini B->ops->bindtocpu = NULL; 1619637a0070SStefano Zampini B->offloadmask = PETSC_OFFLOAD_CPU; 1620637a0070SStefano Zampini PetscFunctionReturn(0); 1621637a0070SStefano Zampini } 1622637a0070SStefano Zampini 16239371c9d4SSatish Balay PetscErrorCode MatConvert_MPIDense_MPIDenseCUDA(Mat M, MatType type, MatReuse reuse, Mat *newmat) { 1624637a0070SStefano Zampini Mat B; 1625637a0070SStefano Zampini Mat_MPIDense *m; 1626637a0070SStefano Zampini 1627637a0070SStefano Zampini PetscFunctionBegin; 1628637a0070SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 16299566063dSJacob Faibussowitsch PetscCall(MatDuplicate(M, MAT_COPY_VALUES, newmat)); 1630637a0070SStefano Zampini } else if (reuse == MAT_REUSE_MATRIX) { 16319566063dSJacob Faibussowitsch PetscCall(MatCopy(M, *newmat, SAME_NONZERO_PATTERN)); 1632637a0070SStefano Zampini } 1633637a0070SStefano Zampini 1634637a0070SStefano Zampini B = *newmat; 16359566063dSJacob Faibussowitsch PetscCall(PetscFree(B->defaultvectype)); 16369566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(VECCUDA, &B->defaultvectype)); 16379566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)B, MATMPIDENSECUDA)); 16389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatConvert_mpidensecuda_mpidense_C", MatConvert_MPIDenseCUDA_MPIDense)); 16399566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 16409566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 16419566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 16429566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 16439566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArray_C", MatDenseCUDAGetArray_MPIDenseCUDA)); 16449566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArrayRead_C", MatDenseCUDAGetArrayRead_MPIDenseCUDA)); 16459566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArrayWrite_C", MatDenseCUDAGetArrayWrite_MPIDenseCUDA)); 16469566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArray_C", MatDenseCUDARestoreArray_MPIDenseCUDA)); 16479566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArrayRead_C", MatDenseCUDARestoreArrayRead_MPIDenseCUDA)); 16489566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArrayWrite_C", MatDenseCUDARestoreArrayWrite_MPIDenseCUDA)); 16499566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAPlaceArray_C", MatDenseCUDAPlaceArray_MPIDenseCUDA)); 16509566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAResetArray_C", MatDenseCUDAResetArray_MPIDenseCUDA)); 16519566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAReplaceArray_C", MatDenseCUDAReplaceArray_MPIDenseCUDA)); 1652f5ff9c66SStefano Zampini m = (Mat_MPIDense *)(B->data); 1653637a0070SStefano Zampini if (m->A) { 16549566063dSJacob Faibussowitsch PetscCall(MatConvert(m->A, MATSEQDENSECUDA, MAT_INPLACE_MATRIX, &m->A)); 1655637a0070SStefano Zampini B->offloadmask = PETSC_OFFLOAD_BOTH; 1656637a0070SStefano Zampini } else { 1657637a0070SStefano Zampini B->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 1658637a0070SStefano Zampini } 16599566063dSJacob Faibussowitsch PetscCall(MatBindToCPU_MPIDenseCUDA(B, PETSC_FALSE)); 1660637a0070SStefano Zampini 1661637a0070SStefano Zampini B->ops->bindtocpu = MatBindToCPU_MPIDenseCUDA; 1662637a0070SStefano Zampini PetscFunctionReturn(0); 1663637a0070SStefano Zampini } 1664637a0070SStefano Zampini #endif 1665637a0070SStefano Zampini 16669371c9d4SSatish Balay PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) { 16676947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16686947451fSStefano Zampini PetscInt lda; 16696947451fSStefano Zampini 16706947451fSStefano Zampini PetscFunctionBegin; 167128b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 167228b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 167348a46eb9SPierre Jolivet if (!a->cvec) PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec)); 16746947451fSStefano Zampini a->vecinuse = col + 1; 16759566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 16769566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, (PetscScalar **)&a->ptrinuse)); 16779566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda)); 16786947451fSStefano Zampini *v = a->cvec; 16796947451fSStefano Zampini PetscFunctionReturn(0); 16806947451fSStefano Zampini } 16816947451fSStefano Zampini 16829371c9d4SSatish Balay PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) { 16836947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16846947451fSStefano Zampini 16856947451fSStefano Zampini PetscFunctionBegin; 168628b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 168728b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector"); 16886947451fSStefano Zampini a->vecinuse = 0; 16899566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, (PetscScalar **)&a->ptrinuse)); 16909566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1691742765d3SMatthew Knepley if (v) *v = NULL; 16926947451fSStefano Zampini PetscFunctionReturn(0); 16936947451fSStefano Zampini } 16946947451fSStefano Zampini 16959371c9d4SSatish Balay PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) { 16966947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16976947451fSStefano Zampini PetscInt lda; 16986947451fSStefano Zampini 16996947451fSStefano Zampini PetscFunctionBegin; 170028b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 170128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 170248a46eb9SPierre Jolivet if (!a->cvec) PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec)); 17036947451fSStefano Zampini a->vecinuse = col + 1; 17049566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 17059566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &a->ptrinuse)); 17069566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda)); 17079566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(a->cvec)); 17086947451fSStefano Zampini *v = a->cvec; 17096947451fSStefano Zampini PetscFunctionReturn(0); 17106947451fSStefano Zampini } 17116947451fSStefano Zampini 17129371c9d4SSatish Balay PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) { 17136947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 17146947451fSStefano Zampini 17156947451fSStefano Zampini PetscFunctionBegin; 17165f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 17175f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 17186947451fSStefano Zampini a->vecinuse = 0; 17199566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &a->ptrinuse)); 17209566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(a->cvec)); 17219566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1722742765d3SMatthew Knepley if (v) *v = NULL; 17236947451fSStefano Zampini PetscFunctionReturn(0); 17246947451fSStefano Zampini } 17256947451fSStefano Zampini 17269371c9d4SSatish Balay PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) { 17276947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 17286947451fSStefano Zampini PetscInt lda; 17296947451fSStefano Zampini 17306947451fSStefano Zampini PetscFunctionBegin; 17315f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 17325f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 173348a46eb9SPierre Jolivet if (!a->cvec) PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec)); 17346947451fSStefano Zampini a->vecinuse = col + 1; 17359566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 17369566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 17379566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda)); 17386947451fSStefano Zampini *v = a->cvec; 17396947451fSStefano Zampini PetscFunctionReturn(0); 17406947451fSStefano Zampini } 17416947451fSStefano Zampini 17429371c9d4SSatish Balay PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) { 17436947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 17446947451fSStefano Zampini 17456947451fSStefano Zampini PetscFunctionBegin; 17465f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 17475f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 17486947451fSStefano Zampini a->vecinuse = 0; 17499566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 17509566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1751742765d3SMatthew Knepley if (v) *v = NULL; 17526947451fSStefano Zampini PetscFunctionReturn(0); 17536947451fSStefano Zampini } 17546947451fSStefano Zampini 17559371c9d4SSatish Balay PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A, PetscInt rbegin, PetscInt rend, PetscInt cbegin, PetscInt cend, Mat *v) { 17565ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1757616b8fbbSStefano Zampini Mat_MPIDense *c; 1758616b8fbbSStefano Zampini MPI_Comm comm; 1759a2748737SPierre Jolivet PetscInt pbegin, pend; 17605ea7661aSPierre Jolivet 17615ea7661aSPierre Jolivet PetscFunctionBegin; 17629566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 17635f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 17645f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1765a2748737SPierre Jolivet pbegin = PetscMax(0, PetscMin(A->rmap->rend, rbegin) - A->rmap->rstart); 1766a2748737SPierre Jolivet pend = PetscMin(A->rmap->n, PetscMax(0, rend - A->rmap->rstart)); 17675ea7661aSPierre Jolivet if (!a->cmat) { 17689566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &a->cmat)); 17699566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->cmat)); 17709566063dSJacob Faibussowitsch PetscCall(MatSetType(a->cmat, ((PetscObject)A)->type_name)); 1771a2748737SPierre Jolivet if (rend - rbegin == A->rmap->N) PetscCall(PetscLayoutReference(A->rmap, &a->cmat->rmap)); 1772a2748737SPierre Jolivet else { 1773a2748737SPierre Jolivet PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, pend - pbegin)); 1774a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1775a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1776a2748737SPierre Jolivet } 17779566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 17789566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1779a2748737SPierre Jolivet } else { 1780a2748737SPierre Jolivet PetscBool same = (PetscBool)(rend - rbegin == a->cmat->rmap->N); 1781a2748737SPierre Jolivet if (same && a->cmat->rmap->N != A->rmap->N) { 1782a2748737SPierre Jolivet same = (PetscBool)(pend - pbegin == a->cmat->rmap->n); 1783a2748737SPierre Jolivet PetscCall(MPIU_Allreduce(MPI_IN_PLACE, &same, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 1784a2748737SPierre Jolivet } 1785a2748737SPierre Jolivet if (!same) { 1786a2748737SPierre Jolivet PetscCall(PetscLayoutDestroy(&a->cmat->rmap)); 1787a2748737SPierre Jolivet PetscCall(PetscLayoutCreate(comm, &a->cmat->rmap)); 1788a2748737SPierre Jolivet PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, pend - pbegin)); 1789a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1790a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1791a2748737SPierre Jolivet } 1792a2748737SPierre Jolivet if (cend - cbegin != a->cmat->cmap->N) { 17939566063dSJacob Faibussowitsch PetscCall(PetscLayoutDestroy(&a->cmat->cmap)); 17949566063dSJacob Faibussowitsch PetscCall(PetscLayoutCreate(comm, &a->cmat->cmap)); 17959566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 17969566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 17975ea7661aSPierre Jolivet } 1798a2748737SPierre Jolivet } 1799616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 18005f80ce2aSJacob Faibussowitsch PetscCheck(!c->A, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1801a2748737SPierre Jolivet PetscCall(MatDenseGetSubMatrix(a->A, pbegin, pend, cbegin, cend, &c->A)); 1802*3faff063SStefano Zampini 1803616b8fbbSStefano Zampini a->cmat->preallocated = PETSC_TRUE; 1804616b8fbbSStefano Zampini a->cmat->assembled = PETSC_TRUE; 1805*3faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 1806*3faff063SStefano Zampini a->cmat->offloadmask = c->A->offloadmask; 1807*3faff063SStefano Zampini #endif 18085ea7661aSPierre Jolivet a->matinuse = cbegin + 1; 18095ea7661aSPierre Jolivet *v = a->cmat; 18105ea7661aSPierre Jolivet PetscFunctionReturn(0); 18115ea7661aSPierre Jolivet } 18125ea7661aSPierre Jolivet 18139371c9d4SSatish Balay PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A, Mat *v) { 18145ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1815616b8fbbSStefano Zampini Mat_MPIDense *c; 18165ea7661aSPierre Jolivet 18175ea7661aSPierre Jolivet PetscFunctionBegin; 18185f80ce2aSJacob Faibussowitsch PetscCheck(a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetSubMatrix() first"); 18195f80ce2aSJacob Faibussowitsch PetscCheck(a->cmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal matrix"); 18205f80ce2aSJacob Faibussowitsch PetscCheck(*v == a->cmat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Not the matrix obtained from MatDenseGetSubMatrix()"); 18215ea7661aSPierre Jolivet a->matinuse = 0; 1822616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 18239566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreSubMatrix(a->A, &c->A)); 1824742765d3SMatthew Knepley if (v) *v = NULL; 1825*3faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 1826*3faff063SStefano Zampini A->offloadmask = a->A->offloadmask; 1827*3faff063SStefano Zampini #endif 18285ea7661aSPierre Jolivet PetscFunctionReturn(0); 18295ea7661aSPierre Jolivet } 18305ea7661aSPierre Jolivet 1831002bc6daSRichard Tran Mills /*MC 1832002bc6daSRichard Tran Mills MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices. 1833002bc6daSRichard Tran Mills 1834002bc6daSRichard Tran Mills Options Database Keys: 183511a5261eSBarry Smith . -mat_type mpidense - sets the matrix type to `MATMPIDENSE` during a call to `MatSetFromOptions()` 1836002bc6daSRichard Tran Mills 1837002bc6daSRichard Tran Mills Level: beginner 1838002bc6daSRichard Tran Mills 183911a5261eSBarry Smith .seealso: `MatCreateDense()`, `MATSEQDENSE`, `MATDENSE` 1840002bc6daSRichard Tran Mills M*/ 18419371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode MatCreate_MPIDense(Mat mat) { 1842273d9f13SBarry Smith Mat_MPIDense *a; 1843273d9f13SBarry Smith 1844273d9f13SBarry Smith PetscFunctionBegin; 18459566063dSJacob Faibussowitsch PetscCall(PetscNewLog(mat, &a)); 1846b0a32e0cSBarry Smith mat->data = (void *)a; 18479566063dSJacob Faibussowitsch PetscCall(PetscMemcpy(mat->ops, &MatOps_Values, sizeof(struct _MatOps))); 1848273d9f13SBarry Smith 1849273d9f13SBarry Smith mat->insertmode = NOT_SET_VALUES; 1850273d9f13SBarry Smith 1851273d9f13SBarry Smith /* build cache for off array entries formed */ 1852273d9f13SBarry Smith a->donotstash = PETSC_FALSE; 18532205254eSKarl Rupp 18549566063dSJacob Faibussowitsch PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat), 1, &mat->stash)); 1855273d9f13SBarry Smith 1856273d9f13SBarry Smith /* stuff used for matrix vector multiply */ 1857f4259b30SLisandro Dalcin a->lvec = NULL; 1858f4259b30SLisandro Dalcin a->Mvctx = NULL; 1859273d9f13SBarry Smith a->roworiented = PETSC_TRUE; 1860273d9f13SBarry Smith 18619566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", MatDenseGetLDA_MPIDense)); 18629566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", MatDenseSetLDA_MPIDense)); 18639566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", MatDenseGetArray_MPIDense)); 18649566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", MatDenseRestoreArray_MPIDense)); 18659566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", MatDenseGetArrayRead_MPIDense)); 18669566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", MatDenseRestoreArrayRead_MPIDense)); 18679566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", MatDenseGetArrayWrite_MPIDense)); 18689566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", MatDenseRestoreArrayWrite_MPIDense)); 18699566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", MatDensePlaceArray_MPIDense)); 18709566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", MatDenseResetArray_MPIDense)); 18719566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", MatDenseReplaceArray_MPIDense)); 18729566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense)); 18739566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense)); 18749566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense)); 18759566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense)); 18769566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense)); 18779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense)); 18789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", MatDenseGetSubMatrix_MPIDense)); 18799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", MatDenseRestoreSubMatrix_MPIDense)); 18809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", MatConvert_MPIAIJ_MPIDense)); 18819566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", MatConvert_MPIDense_MPIAIJ)); 18828baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 18839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", MatConvert_MPIDense_Elemental)); 18848baccfbdSHong Zhang #endif 1885d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 18869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", MatConvert_Dense_ScaLAPACK)); 1887d24d4204SJose E. Roman #endif 1888637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 18899566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", MatConvert_MPIDense_MPIDenseCUDA)); 1890637a0070SStefano Zampini #endif 18919566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", MatMPIDenseSetPreallocation_MPIDense)); 18929566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 18939566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 18946718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 18959566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 18969566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 18976718818eSStefano Zampini #endif 18988949adfdSHong Zhang 18999566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", MatDenseGetColumn_MPIDense)); 19009566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", MatDenseRestoreColumn_MPIDense)); 19019566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATMPIDENSE)); 1902273d9f13SBarry Smith PetscFunctionReturn(0); 1903273d9f13SBarry Smith } 1904273d9f13SBarry Smith 1905209238afSKris Buschelman /*MC 1906637a0070SStefano Zampini MATMPIDENSECUDA - MATMPIDENSECUDA = "mpidensecuda" - A matrix type to be used for distributed dense matrices on GPUs. 1907637a0070SStefano Zampini 1908637a0070SStefano Zampini Options Database Keys: 190911a5261eSBarry Smith . -mat_type mpidensecuda - sets the matrix type to `MATMPIDENSECUDA` during a call to `MatSetFromOptions()` 1910637a0070SStefano Zampini 1911637a0070SStefano Zampini Level: beginner 1912637a0070SStefano Zampini 191311a5261eSBarry Smith .seealso: `MATMPIDENSE`, `MATSEQDENSE`, `MATSEQDENSECUDA` 1914637a0070SStefano Zampini M*/ 1915637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 1916a4af0ceeSJacob Faibussowitsch #include <petsc/private/deviceimpl.h> 19179371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode MatCreate_MPIDenseCUDA(Mat B) { 1918637a0070SStefano Zampini PetscFunctionBegin; 19199566063dSJacob Faibussowitsch PetscCall(PetscDeviceInitialize(PETSC_DEVICE_CUDA)); 19209566063dSJacob Faibussowitsch PetscCall(MatCreate_MPIDense(B)); 19219566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_MPIDenseCUDA(B, MATMPIDENSECUDA, MAT_INPLACE_MATRIX, &B)); 1922637a0070SStefano Zampini PetscFunctionReturn(0); 1923637a0070SStefano Zampini } 1924637a0070SStefano Zampini #endif 1925637a0070SStefano Zampini 1926637a0070SStefano Zampini /*MC 1927002d173eSKris Buschelman MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices. 1928209238afSKris Buschelman 192911a5261eSBarry Smith This matrix type is identical to `MATSEQDENSE` when constructed with a single process communicator, 193011a5261eSBarry Smith and `MATMPIDENSE` otherwise. 1931209238afSKris Buschelman 1932209238afSKris Buschelman Options Database Keys: 193311a5261eSBarry Smith . -mat_type dense - sets the matrix type to `MATDENSE` during a call to `MatSetFromOptions()` 1934209238afSKris Buschelman 1935209238afSKris Buschelman Level: beginner 1936209238afSKris Buschelman 1937c2e3fba1SPatrick Sanan .seealso: `MATSEQDENSE`, `MATMPIDENSE`, `MATDENSECUDA` 19386947451fSStefano Zampini M*/ 19396947451fSStefano Zampini 19406947451fSStefano Zampini /*MC 19416947451fSStefano Zampini MATDENSECUDA - MATDENSECUDA = "densecuda" - A matrix type to be used for dense matrices on GPUs. 19426947451fSStefano Zampini 194311a5261eSBarry Smith This matrix type is identical to `MATSEQDENSECUDA` when constructed with a single process communicator, 194411a5261eSBarry Smith and `MATMPIDENSECUDA` otherwise. 19456947451fSStefano Zampini 19466947451fSStefano Zampini Options Database Keys: 194711a5261eSBarry Smith . -mat_type densecuda - sets the matrix type to `MATDENSECUDA` during a call to `MatSetFromOptions()` 19486947451fSStefano Zampini 19496947451fSStefano Zampini Level: beginner 19506947451fSStefano Zampini 1951c2e3fba1SPatrick Sanan .seealso: `MATSEQDENSECUDA`, `MATMPIDENSECUDA`, `MATDENSE` 1952209238afSKris Buschelman M*/ 1953209238afSKris Buschelman 1954273d9f13SBarry Smith /*@C 1955273d9f13SBarry Smith MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries 1956273d9f13SBarry Smith 19578f490ea3SStefano Zampini Collective 1958273d9f13SBarry Smith 1959273d9f13SBarry Smith Input Parameters: 19601c4f3114SJed Brown . B - the matrix 19610298fd71SBarry Smith - data - optional location of matrix data. Set data=NULL for PETSc 1962273d9f13SBarry Smith to control all matrix memory allocation. 1963273d9f13SBarry Smith 1964273d9f13SBarry Smith Notes: 1965273d9f13SBarry Smith The dense format is fully compatible with standard Fortran 77 1966273d9f13SBarry Smith storage by columns. 1967273d9f13SBarry Smith 1968273d9f13SBarry Smith The data input variable is intended primarily for Fortran programmers 1969273d9f13SBarry Smith who wish to allocate their own matrix memory space. Most users should 19700298fd71SBarry Smith set data=NULL. 1971273d9f13SBarry Smith 1972273d9f13SBarry Smith Level: intermediate 1973273d9f13SBarry Smith 197411a5261eSBarry Smith .seealso: `MATMPIDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 1975273d9f13SBarry Smith @*/ 19769371c9d4SSatish Balay PetscErrorCode MatMPIDenseSetPreallocation(Mat B, PetscScalar *data) { 1977273d9f13SBarry Smith PetscFunctionBegin; 1978d5ea218eSStefano Zampini PetscValidHeaderSpecific(B, MAT_CLASSID, 1); 1979cac4c232SBarry Smith PetscTryMethod(B, "MatMPIDenseSetPreallocation_C", (Mat, PetscScalar *), (B, data)); 1980273d9f13SBarry Smith PetscFunctionReturn(0); 1981273d9f13SBarry Smith } 1982273d9f13SBarry Smith 1983d3042a70SBarry Smith /*@ 198411a5261eSBarry Smith MatDensePlaceArray - Allows one to replace the array in a `MATDENSE` matrix with an 1985d3042a70SBarry Smith array provided by the user. This is useful to avoid copying an array 1986d3042a70SBarry Smith into a matrix 1987d3042a70SBarry Smith 1988d3042a70SBarry Smith Not Collective 1989d3042a70SBarry Smith 1990d3042a70SBarry Smith Input Parameters: 1991d3042a70SBarry Smith + mat - the matrix 1992d3042a70SBarry Smith - array - the array in column major order 1993d3042a70SBarry Smith 199411a5261eSBarry Smith Note: 199511a5261eSBarry Smith You can return to the original array with a call to `MatDenseResetArray()`. The user is responsible for freeing this array; it will not be 1996d3042a70SBarry Smith freed when the matrix is destroyed. 1997d3042a70SBarry Smith 1998d3042a70SBarry Smith Level: developer 1999d3042a70SBarry Smith 200011a5261eSBarry Smith .seealso: `MATDENSE`, `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`, 200111a5261eSBarry Smith `MatDenseReplaceArray()` 2002d3042a70SBarry Smith @*/ 20039371c9d4SSatish Balay PetscErrorCode MatDensePlaceArray(Mat mat, const PetscScalar *array) { 2004d3042a70SBarry Smith PetscFunctionBegin; 2005d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 2006cac4c232SBarry Smith PetscUseMethod(mat, "MatDensePlaceArray_C", (Mat, const PetscScalar *), (mat, array)); 20079566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 2008*3faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 2009637a0070SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 2010637a0070SStefano Zampini #endif 2011d3042a70SBarry Smith PetscFunctionReturn(0); 2012d3042a70SBarry Smith } 2013d3042a70SBarry Smith 2014d3042a70SBarry Smith /*@ 201511a5261eSBarry Smith MatDenseResetArray - Resets the matrix array to that it previously had before the call to `MatDensePlaceArray()` 2016d3042a70SBarry Smith 2017d3042a70SBarry Smith Not Collective 2018d3042a70SBarry Smith 2019d3042a70SBarry Smith Input Parameters: 2020d3042a70SBarry Smith . mat - the matrix 2021d3042a70SBarry Smith 202211a5261eSBarry Smith Note: 202311a5261eSBarry Smith You can only call this after a call to `MatDensePlaceArray()` 2024d3042a70SBarry Smith 2025d3042a70SBarry Smith Level: developer 2026d3042a70SBarry Smith 202711a5261eSBarry Smith .seealso: `MATDENSE`, `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()` 2028d3042a70SBarry Smith @*/ 20299371c9d4SSatish Balay PetscErrorCode MatDenseResetArray(Mat mat) { 2030d3042a70SBarry Smith PetscFunctionBegin; 2031d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 2032cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseResetArray_C", (Mat), (mat)); 20339566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 2034d3042a70SBarry Smith PetscFunctionReturn(0); 2035d3042a70SBarry Smith } 2036d3042a70SBarry Smith 2037d5ea218eSStefano Zampini /*@ 2038d5ea218eSStefano Zampini MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an 2039d5ea218eSStefano Zampini array provided by the user. This is useful to avoid copying an array 2040d5ea218eSStefano Zampini into a matrix 2041d5ea218eSStefano Zampini 2042d5ea218eSStefano Zampini Not Collective 2043d5ea218eSStefano Zampini 2044d5ea218eSStefano Zampini Input Parameters: 2045d5ea218eSStefano Zampini + mat - the matrix 2046d5ea218eSStefano Zampini - array - the array in column major order 2047d5ea218eSStefano Zampini 204811a5261eSBarry Smith Note: 204911a5261eSBarry Smith The memory passed in MUST be obtained with `PetscMalloc()` and CANNOT be 2050d5ea218eSStefano Zampini freed by the user. It will be freed when the matrix is destroyed. 2051d5ea218eSStefano Zampini 2052d5ea218eSStefano Zampini Level: developer 2053d5ea218eSStefano Zampini 205411a5261eSBarry Smith .seealso: `MatDensePlaceArray()`, `MatDenseGetArray()`, `VecReplaceArray()` 2055d5ea218eSStefano Zampini @*/ 20569371c9d4SSatish Balay PetscErrorCode MatDenseReplaceArray(Mat mat, const PetscScalar *array) { 2057d5ea218eSStefano Zampini PetscFunctionBegin; 2058d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 2059cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseReplaceArray_C", (Mat, const PetscScalar *), (mat, array)); 20609566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 2061*3faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 2062d5ea218eSStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 2063d5ea218eSStefano Zampini #endif 2064d5ea218eSStefano Zampini PetscFunctionReturn(0); 2065d5ea218eSStefano Zampini } 2066d5ea218eSStefano Zampini 2067637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 20688965ea79SLois Curfman McInnes /*@C 206911a5261eSBarry Smith MatDenseCUDAPlaceArray - Allows one to replace the GPU array in a `MATDENSECUDA` matrix with an 2070637a0070SStefano Zampini array provided by the user. This is useful to avoid copying an array 2071637a0070SStefano Zampini into a matrix 2072637a0070SStefano Zampini 2073637a0070SStefano Zampini Not Collective 2074637a0070SStefano Zampini 2075637a0070SStefano Zampini Input Parameters: 2076637a0070SStefano Zampini + mat - the matrix 2077637a0070SStefano Zampini - array - the array in column major order 2078637a0070SStefano Zampini 207911a5261eSBarry Smith Note: 208011a5261eSBarry Smith You can return to the original array with a call to `MatDenseCUDAResetArray()`. The user is responsible for freeing this array; it will not be 2081637a0070SStefano Zampini freed when the matrix is destroyed. The array must have been allocated with cudaMalloc(). 2082637a0070SStefano Zampini 2083637a0070SStefano Zampini Level: developer 2084637a0070SStefano Zampini 208511a5261eSBarry Smith .seealso: `MATDENSECUDA`, `MatDenseCUDAGetArray()`, `MatDenseCUDAResetArray()`, `MatDenseCUDAReplaceArray()` 2086637a0070SStefano Zampini @*/ 20879371c9d4SSatish Balay PetscErrorCode MatDenseCUDAPlaceArray(Mat mat, const PetscScalar *array) { 2088637a0070SStefano Zampini PetscFunctionBegin; 2089d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 2090cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseCUDAPlaceArray_C", (Mat, const PetscScalar *), (mat, array)); 20919566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 2092637a0070SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_GPU; 2093637a0070SStefano Zampini PetscFunctionReturn(0); 2094637a0070SStefano Zampini } 2095637a0070SStefano Zampini 2096637a0070SStefano Zampini /*@C 209711a5261eSBarry Smith MatDenseCUDAResetArray - Resets the matrix array to that it previously had before the call to `MatDenseCUDAPlaceArray()` 2098637a0070SStefano Zampini 2099637a0070SStefano Zampini Not Collective 2100637a0070SStefano Zampini 2101637a0070SStefano Zampini Input Parameters: 2102637a0070SStefano Zampini . mat - the matrix 2103637a0070SStefano Zampini 210411a5261eSBarry Smith Note: 210511a5261eSBarry Smith You can only call this after a call to `MatDenseCUDAPlaceArray()` 2106637a0070SStefano Zampini 2107637a0070SStefano Zampini Level: developer 2108637a0070SStefano Zampini 210911a5261eSBarry Smith .seealso: `MATDENSECUDA`, `MatDenseCUDAGetArray()`, `MatDenseCUDAPlaceArray()` 2110637a0070SStefano Zampini @*/ 21119371c9d4SSatish Balay PetscErrorCode MatDenseCUDAResetArray(Mat mat) { 2112637a0070SStefano Zampini PetscFunctionBegin; 2113d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 2114cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseCUDAResetArray_C", (Mat), (mat)); 21159566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 2116637a0070SStefano Zampini PetscFunctionReturn(0); 2117637a0070SStefano Zampini } 2118637a0070SStefano Zampini 2119637a0070SStefano Zampini /*@C 212011a5261eSBarry Smith MatDenseCUDAReplaceArray - Allows one to replace the GPU array in a `MATDENSECUDA` matrix with an 2121d5ea218eSStefano Zampini array provided by the user. This is useful to avoid copying an array 2122d5ea218eSStefano Zampini into a matrix 2123d5ea218eSStefano Zampini 2124d5ea218eSStefano Zampini Not Collective 2125d5ea218eSStefano Zampini 2126d5ea218eSStefano Zampini Input Parameters: 2127d5ea218eSStefano Zampini + mat - the matrix 2128d5ea218eSStefano Zampini - array - the array in column major order 2129d5ea218eSStefano Zampini 213011a5261eSBarry Smith Note: 2131d5ea218eSStefano Zampini This permanently replaces the GPU array and frees the memory associated with the old GPU array. 2132d5ea218eSStefano Zampini The memory passed in CANNOT be freed by the user. It will be freed 2133d5ea218eSStefano Zampini when the matrix is destroyed. The array should respect the matrix leading dimension. 2134d5ea218eSStefano Zampini 2135d5ea218eSStefano Zampini Level: developer 2136d5ea218eSStefano Zampini 2137db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAPlaceArray()`, `MatDenseCUDAResetArray()` 2138d5ea218eSStefano Zampini @*/ 21399371c9d4SSatish Balay PetscErrorCode MatDenseCUDAReplaceArray(Mat mat, const PetscScalar *array) { 2140d5ea218eSStefano Zampini PetscFunctionBegin; 2141d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 2142cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseCUDAReplaceArray_C", (Mat, const PetscScalar *), (mat, array)); 21439566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 2144d5ea218eSStefano Zampini mat->offloadmask = PETSC_OFFLOAD_GPU; 2145d5ea218eSStefano Zampini PetscFunctionReturn(0); 2146d5ea218eSStefano Zampini } 2147d5ea218eSStefano Zampini 2148d5ea218eSStefano Zampini /*@C 214911a5261eSBarry Smith MatDenseCUDAGetArrayWrite - Provides write access to the CUDA buffer inside a `MATDENSECUDA` matrix. 2150637a0070SStefano Zampini 2151637a0070SStefano Zampini Not Collective 2152637a0070SStefano Zampini 2153637a0070SStefano Zampini Input Parameters: 2154637a0070SStefano Zampini . A - the matrix 2155637a0070SStefano Zampini 2156637a0070SStefano Zampini Output Parameters 2157637a0070SStefano Zampini . array - the GPU array in column major order 2158637a0070SStefano Zampini 2159637a0070SStefano Zampini Notes: 216011a5261eSBarry Smith The data on the GPU may not be updated due to operations done on the CPU. If you need updated data, use `MatDenseCUDAGetArray()`. 216111a5261eSBarry Smith 216211a5261eSBarry Smith The array must be restored with `MatDenseCUDARestoreArrayWrite()` when no longer needed. 2163637a0070SStefano Zampini 2164637a0070SStefano Zampini Level: developer 2165637a0070SStefano Zampini 216611a5261eSBarry Smith .seealso: `MATDENSECUDA`, `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayRead()`, `MatDenseCUDARestoreArrayRead()` 2167637a0070SStefano Zampini @*/ 21689371c9d4SSatish Balay PetscErrorCode MatDenseCUDAGetArrayWrite(Mat A, PetscScalar **a) { 2169637a0070SStefano Zampini PetscFunctionBegin; 2170d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 2171cac4c232SBarry Smith PetscUseMethod(A, "MatDenseCUDAGetArrayWrite_C", (Mat, PetscScalar **), (A, a)); 21729566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 2173637a0070SStefano Zampini PetscFunctionReturn(0); 2174637a0070SStefano Zampini } 2175637a0070SStefano Zampini 2176637a0070SStefano Zampini /*@C 217711a5261eSBarry Smith MatDenseCUDARestoreArrayWrite - Restore write access to the CUDA buffer inside a `MATDENSECUDA` matrix previously obtained with `MatDenseCUDAGetArrayWrite()`. 2178637a0070SStefano Zampini 2179637a0070SStefano Zampini Not Collective 2180637a0070SStefano Zampini 2181637a0070SStefano Zampini Input Parameters: 2182637a0070SStefano Zampini + A - the matrix 2183637a0070SStefano Zampini - array - the GPU array in column major order 2184637a0070SStefano Zampini 2185637a0070SStefano Zampini Level: developer 2186637a0070SStefano Zampini 218711a5261eSBarry Smith .seealso: `MATDENSECUDA`, `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`, `MatDenseCUDAGetArrayRead()` 2188637a0070SStefano Zampini @*/ 21899371c9d4SSatish Balay PetscErrorCode MatDenseCUDARestoreArrayWrite(Mat A, PetscScalar **a) { 2190637a0070SStefano Zampini PetscFunctionBegin; 2191d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 2192cac4c232SBarry Smith PetscUseMethod(A, "MatDenseCUDARestoreArrayWrite_C", (Mat, PetscScalar **), (A, a)); 21939566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 2194637a0070SStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 2195637a0070SStefano Zampini PetscFunctionReturn(0); 2196637a0070SStefano Zampini } 2197637a0070SStefano Zampini 2198637a0070SStefano Zampini /*@C 219911a5261eSBarry Smith MatDenseCUDAGetArrayRead - Provides read-only access to the CUDA buffer inside a `MATDENSECUDA` matrix. The array must be restored with `MatDenseCUDARestoreArrayRead()` when no longer needed. 2200637a0070SStefano Zampini 2201637a0070SStefano Zampini Not Collective 2202637a0070SStefano Zampini 2203637a0070SStefano Zampini Input Parameters: 2204637a0070SStefano Zampini . A - the matrix 2205637a0070SStefano Zampini 2206637a0070SStefano Zampini Output Parameters 2207637a0070SStefano Zampini . array - the GPU array in column major order 2208637a0070SStefano Zampini 220911a5261eSBarry Smith Note: 221011a5261eSBarry Smith Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use `MatDenseCUDAGetArrayWrite()`. 2211637a0070SStefano Zampini 2212637a0070SStefano Zampini Level: developer 2213637a0070SStefano Zampini 221411a5261eSBarry Smith .seealso: `MATDENSECUDA`, `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()` 2215637a0070SStefano Zampini @*/ 22169371c9d4SSatish Balay PetscErrorCode MatDenseCUDAGetArrayRead(Mat A, const PetscScalar **a) { 2217637a0070SStefano Zampini PetscFunctionBegin; 2218d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 2219cac4c232SBarry Smith PetscUseMethod(A, "MatDenseCUDAGetArrayRead_C", (Mat, const PetscScalar **), (A, a)); 2220637a0070SStefano Zampini PetscFunctionReturn(0); 2221637a0070SStefano Zampini } 2222637a0070SStefano Zampini 2223637a0070SStefano Zampini /*@C 222411a5261eSBarry Smith MatDenseCUDARestoreArrayRead - Restore read-only access to the CUDA buffer inside a `MATDENSECUDA` matrix previously obtained with a call to `MatDenseCUDAGetArrayRead()`. 2225637a0070SStefano Zampini 2226637a0070SStefano Zampini Not Collective 2227637a0070SStefano Zampini 2228637a0070SStefano Zampini Input Parameters: 2229637a0070SStefano Zampini + A - the matrix 2230637a0070SStefano Zampini - array - the GPU array in column major order 2231637a0070SStefano Zampini 223211a5261eSBarry Smith Note: 223311a5261eSBarry Smith Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use `MatDenseCUDAGetArrayWrite()`. 2234637a0070SStefano Zampini 2235637a0070SStefano Zampini Level: developer 2236637a0070SStefano Zampini 223711a5261eSBarry Smith .seealso: `MATDENSECUDA`, `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDAGetArrayRead()` 2238637a0070SStefano Zampini @*/ 22399371c9d4SSatish Balay PetscErrorCode MatDenseCUDARestoreArrayRead(Mat A, const PetscScalar **a) { 2240637a0070SStefano Zampini PetscFunctionBegin; 2241cac4c232SBarry Smith PetscUseMethod(A, "MatDenseCUDARestoreArrayRead_C", (Mat, const PetscScalar **), (A, a)); 2242637a0070SStefano Zampini PetscFunctionReturn(0); 2243637a0070SStefano Zampini } 2244637a0070SStefano Zampini 2245637a0070SStefano Zampini /*@C 224611a5261eSBarry Smith MatDenseCUDAGetArray - Provides access to the CUDA buffer inside a `MATDENSECUDA` matrix. The array must be restored with `MatDenseCUDARestoreArray()` when no longer needed. 2247637a0070SStefano Zampini 2248637a0070SStefano Zampini Not Collective 2249637a0070SStefano Zampini 2250637a0070SStefano Zampini Input Parameters: 2251637a0070SStefano Zampini . A - the matrix 2252637a0070SStefano Zampini 2253637a0070SStefano Zampini Output Parameters 2254637a0070SStefano Zampini . array - the GPU array in column major order 2255637a0070SStefano Zampini 225611a5261eSBarry Smith Note: 225711a5261eSBarry Smith Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use `MatDenseCUDAGetArrayWrite()`. For read-only access, use `MatDenseCUDAGetArrayRead()`. 2258637a0070SStefano Zampini 2259637a0070SStefano Zampini Level: developer 2260637a0070SStefano Zampini 226111a5261eSBarry Smith .seealso: `MATDENSECUDA`, `MatDenseCUDAGetArrayRead()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()` 2262637a0070SStefano Zampini @*/ 22639371c9d4SSatish Balay PetscErrorCode MatDenseCUDAGetArray(Mat A, PetscScalar **a) { 2264637a0070SStefano Zampini PetscFunctionBegin; 2265d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 2266cac4c232SBarry Smith PetscUseMethod(A, "MatDenseCUDAGetArray_C", (Mat, PetscScalar **), (A, a)); 22679566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 2268637a0070SStefano Zampini PetscFunctionReturn(0); 2269637a0070SStefano Zampini } 2270637a0070SStefano Zampini 2271637a0070SStefano Zampini /*@C 227211a5261eSBarry Smith MatDenseCUDARestoreArray - Restore access to the CUDA buffer inside a `MATDENSECUDA` matrix previously obtained with `MatDenseCUDAGetArray()`. 2273637a0070SStefano Zampini 2274637a0070SStefano Zampini Not Collective 2275637a0070SStefano Zampini 2276637a0070SStefano Zampini Input Parameters: 2277637a0070SStefano Zampini + A - the matrix 2278637a0070SStefano Zampini - array - the GPU array in column major order 2279637a0070SStefano Zampini 2280637a0070SStefano Zampini Level: developer 2281637a0070SStefano Zampini 228211a5261eSBarry Smith .seealso: `MATDENSECUDA`, `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`, `MatDenseCUDAGetArrayRead()` 2283637a0070SStefano Zampini @*/ 22849371c9d4SSatish Balay PetscErrorCode MatDenseCUDARestoreArray(Mat A, PetscScalar **a) { 2285637a0070SStefano Zampini PetscFunctionBegin; 2286d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 2287cac4c232SBarry Smith PetscUseMethod(A, "MatDenseCUDARestoreArray_C", (Mat, PetscScalar **), (A, a)); 22889566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 2289637a0070SStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 2290637a0070SStefano Zampini PetscFunctionReturn(0); 2291637a0070SStefano Zampini } 2292637a0070SStefano Zampini #endif 2293637a0070SStefano Zampini 2294637a0070SStefano Zampini /*@C 229511a5261eSBarry Smith MatCreateDense - Creates a matrix in `MATDENSE` format. 22968965ea79SLois Curfman McInnes 2297d083f849SBarry Smith Collective 2298db81eaa0SLois Curfman McInnes 22998965ea79SLois Curfman McInnes Input Parameters: 2300db81eaa0SLois Curfman McInnes + comm - MPI communicator 230111a5261eSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if M is given) 230211a5261eSBarry Smith . n - number of local columns (or `PETSC_DECIDE` to have calculated if N is given) 230311a5261eSBarry Smith . M - number of global rows (or `PETSC_DECIDE` to have calculated if m is given) 230411a5261eSBarry Smith . N - number of global columns (or `PETSC_DECIDE` to have calculated if n is given) 230511a5261eSBarry Smith - data - optional location of matrix data. Set data to NULL (`PETSC_NULL_SCALAR` for Fortran users) for PETSc 2306dfc5480cSLois Curfman McInnes to control all matrix memory allocation. 23078965ea79SLois Curfman McInnes 23088965ea79SLois Curfman McInnes Output Parameter: 2309477f1c0bSLois Curfman McInnes . A - the matrix 23108965ea79SLois Curfman McInnes 2311b259b22eSLois Curfman McInnes Notes: 231239ddd567SLois Curfman McInnes The dense format is fully compatible with standard Fortran 77 231339ddd567SLois Curfman McInnes storage by columns. 231411a5261eSBarry Smith 231511a5261eSBarry Smith Although local portions of the matrix are stored in column-major 2316002bc6daSRichard Tran Mills order, the matrix is partitioned across MPI ranks by row. 23178965ea79SLois Curfman McInnes 231818f449edSLois Curfman McInnes The data input variable is intended primarily for Fortran programmers 231918f449edSLois Curfman McInnes who wish to allocate their own matrix memory space. Most users should 232011a5261eSBarry Smith set data=NULL (`PETSC_NULL_SCALAR` for Fortran users). 232118f449edSLois Curfman McInnes 23228965ea79SLois Curfman McInnes The user MUST specify either the local or global matrix dimensions 23238965ea79SLois Curfman McInnes (possibly both). 23248965ea79SLois Curfman McInnes 2325027ccd11SLois Curfman McInnes Level: intermediate 2326027ccd11SLois Curfman McInnes 232711a5261eSBarry Smith .seealso: `MATDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 23288965ea79SLois Curfman McInnes @*/ 23299371c9d4SSatish Balay PetscErrorCode MatCreateDense(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar *data, Mat *A) { 23303a40ed3dSBarry Smith PetscFunctionBegin; 23319566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 23329566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, M, N)); 23336f08ad05SPierre Jolivet PetscCall(MatSetType(*A, MATDENSE)); 23349566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(*A, data)); 23356f08ad05SPierre Jolivet PetscCall(MatMPIDenseSetPreallocation(*A, data)); 23363a40ed3dSBarry Smith PetscFunctionReturn(0); 23378965ea79SLois Curfman McInnes } 23388965ea79SLois Curfman McInnes 2339637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 2340637a0070SStefano Zampini /*@C 234111a5261eSBarry Smith MatCreateDenseCUDA - Creates a matrix in `MATDENSECUDA` format using CUDA. 2342637a0070SStefano Zampini 2343637a0070SStefano Zampini Collective 2344637a0070SStefano Zampini 2345637a0070SStefano Zampini Input Parameters: 2346637a0070SStefano Zampini + comm - MPI communicator 234711a5261eSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if M is given) 234811a5261eSBarry Smith . n - number of local columns (or `PETSC_DECIDE` to have calculated if N is given) 234911a5261eSBarry Smith . M - number of global rows (or `PETSC_DECIDE` to have calculated if m is given) 235011a5261eSBarry Smith . N - number of global columns (or `PETSC_DECIDE` to have calculated if n is given) 2351637a0070SStefano Zampini - data - optional location of GPU matrix data. Set data=NULL for PETSc 2352637a0070SStefano Zampini to control matrix memory allocation. 2353637a0070SStefano Zampini 2354637a0070SStefano Zampini Output Parameter: 2355637a0070SStefano Zampini . A - the matrix 2356637a0070SStefano Zampini 2357637a0070SStefano Zampini Level: intermediate 2358637a0070SStefano Zampini 235911a5261eSBarry Smith .seealso: `MATDENSECUDA`, `MatCreate()`, `MatCreateDense()` 2360637a0070SStefano Zampini @*/ 23619371c9d4SSatish Balay PetscErrorCode MatCreateDenseCUDA(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar *data, Mat *A) { 2362637a0070SStefano Zampini PetscFunctionBegin; 23639566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 2364637a0070SStefano Zampini PetscValidLogicalCollectiveBool(*A, !!data, 6); 23659566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, M, N)); 23666f08ad05SPierre Jolivet PetscCall(MatSetType(*A, MATDENSECUDA)); 23679566063dSJacob Faibussowitsch PetscCall(MatSeqDenseCUDASetPreallocation(*A, data)); 23686f08ad05SPierre Jolivet PetscCall(MatMPIDenseCUDASetPreallocation(*A, data)); 2369637a0070SStefano Zampini PetscFunctionReturn(0); 2370637a0070SStefano Zampini } 2371637a0070SStefano Zampini #endif 2372637a0070SStefano Zampini 23739371c9d4SSatish Balay static PetscErrorCode MatDuplicate_MPIDense(Mat A, MatDuplicateOption cpvalues, Mat *newmat) { 23748965ea79SLois Curfman McInnes Mat mat; 23753501a2bdSLois Curfman McInnes Mat_MPIDense *a, *oldmat = (Mat_MPIDense *)A->data; 23768965ea79SLois Curfman McInnes 23773a40ed3dSBarry Smith PetscFunctionBegin; 2378f4259b30SLisandro Dalcin *newmat = NULL; 23799566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat)); 23809566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 23819566063dSJacob Faibussowitsch PetscCall(MatSetType(mat, ((PetscObject)A)->type_name)); 2382834f8fabSBarry Smith a = (Mat_MPIDense *)mat->data; 23835aa7edbeSHong Zhang 2384d5f3da31SBarry Smith mat->factortype = A->factortype; 2385c456f294SBarry Smith mat->assembled = PETSC_TRUE; 2386273d9f13SBarry Smith mat->preallocated = PETSC_TRUE; 23878965ea79SLois Curfman McInnes 2388e0fa3b82SLois Curfman McInnes mat->insertmode = NOT_SET_VALUES; 23893782ba37SSatish Balay a->donotstash = oldmat->donotstash; 2390e04c1aa4SHong Zhang 23919566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->rmap, &mat->rmap)); 23929566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->cmap, &mat->cmap)); 23938965ea79SLois Curfman McInnes 23949566063dSJacob Faibussowitsch PetscCall(MatDuplicate(oldmat->A, cpvalues, &a->A)); 23959566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)mat, (PetscObject)a->A)); 239601b82886SBarry Smith 23978965ea79SLois Curfman McInnes *newmat = mat; 23983a40ed3dSBarry Smith PetscFunctionReturn(0); 23998965ea79SLois Curfman McInnes } 24008965ea79SLois Curfman McInnes 24019371c9d4SSatish Balay PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer) { 240287d5ce66SSatish Balay PetscBool isbinary; 240387d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 240487d5ce66SSatish Balay PetscBool ishdf5; 240587d5ce66SSatish Balay #endif 2406eb91f321SVaclav Hapla 2407eb91f321SVaclav Hapla PetscFunctionBegin; 2408eb91f321SVaclav Hapla PetscValidHeaderSpecific(newMat, MAT_CLASSID, 1); 2409eb91f321SVaclav Hapla PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 2410eb91f321SVaclav Hapla /* force binary viewer to load .info file if it has not yet done so */ 24119566063dSJacob Faibussowitsch PetscCall(PetscViewerSetUp(viewer)); 24129566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 241387d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 24149566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERHDF5, &ishdf5)); 241587d5ce66SSatish Balay #endif 2416eb91f321SVaclav Hapla if (isbinary) { 24179566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_Binary(newMat, viewer)); 2418eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5) 241987d5ce66SSatish Balay } else if (ishdf5) { 24209566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_HDF5(newMat, viewer)); 2421eb91f321SVaclav Hapla #endif 242298921bdaSJacob Faibussowitsch } else SETERRQ(PetscObjectComm((PetscObject)newMat), PETSC_ERR_SUP, "Viewer type %s not yet supported for reading %s matrices", ((PetscObject)viewer)->type_name, ((PetscObject)newMat)->type_name); 2423eb91f321SVaclav Hapla PetscFunctionReturn(0); 2424eb91f321SVaclav Hapla } 2425eb91f321SVaclav Hapla 24269371c9d4SSatish Balay static PetscErrorCode MatEqual_MPIDense(Mat A, Mat B, PetscBool *flag) { 24276e4ee0c6SHong Zhang Mat_MPIDense *matB = (Mat_MPIDense *)B->data, *matA = (Mat_MPIDense *)A->data; 24286e4ee0c6SHong Zhang Mat a, b; 242990ace30eSBarry Smith 24306e4ee0c6SHong Zhang PetscFunctionBegin; 24316e4ee0c6SHong Zhang a = matA->A; 24326e4ee0c6SHong Zhang b = matB->A; 24332cf15c64SPierre Jolivet PetscCall(MatEqual(a, b, flag)); 24342cf15c64SPierre Jolivet PetscCall(MPIU_Allreduce(MPI_IN_PLACE, flag, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 24356e4ee0c6SHong Zhang PetscFunctionReturn(0); 24366e4ee0c6SHong Zhang } 243790ace30eSBarry Smith 24389371c9d4SSatish Balay PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data) { 24396718818eSStefano Zampini Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data; 2440baa3c1c6SHong Zhang 2441baa3c1c6SHong Zhang PetscFunctionBegin; 24429566063dSJacob Faibussowitsch PetscCall(PetscFree2(atb->sendbuf, atb->recvcounts)); 24439566063dSJacob Faibussowitsch PetscCall(MatDestroy(&atb->atb)); 24449566063dSJacob Faibussowitsch PetscCall(PetscFree(atb)); 2445baa3c1c6SHong Zhang PetscFunctionReturn(0); 2446baa3c1c6SHong Zhang } 2447baa3c1c6SHong Zhang 24489371c9d4SSatish Balay PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data) { 24496718818eSStefano Zampini Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data; 2450cc48ffa7SToby Isaac 2451cc48ffa7SToby Isaac PetscFunctionBegin; 24529566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->buf[0], abt->buf[1])); 24539566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->recvcounts, abt->recvdispls)); 24549566063dSJacob Faibussowitsch PetscCall(PetscFree(abt)); 2455cc48ffa7SToby Isaac PetscFunctionReturn(0); 2456cc48ffa7SToby Isaac } 2457cc48ffa7SToby Isaac 24589371c9d4SSatish Balay static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) { 2459baa3c1c6SHong Zhang Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 24606718818eSStefano Zampini Mat_TransMatMultDense *atb; 2461cb20be35SHong Zhang MPI_Comm comm; 24626718818eSStefano Zampini PetscMPIInt size, *recvcounts; 24636718818eSStefano Zampini PetscScalar *carray, *sendbuf; 2464637a0070SStefano Zampini const PetscScalar *atbarray; 2465a1f9a5e6SStefano Zampini PetscInt i, cN = C->cmap->N, proc, k, j, lda; 2466e68c0b26SHong Zhang const PetscInt *ranges; 2467cb20be35SHong Zhang 2468cb20be35SHong Zhang PetscFunctionBegin; 24696718818eSStefano Zampini MatCheckProduct(C, 3); 24705f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 24716718818eSStefano Zampini atb = (Mat_TransMatMultDense *)C->product->data; 24726718818eSStefano Zampini recvcounts = atb->recvcounts; 24736718818eSStefano Zampini sendbuf = atb->sendbuf; 24746718818eSStefano Zampini 24759566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 24769566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 2477e68c0b26SHong Zhang 2478c5ef1628SHong Zhang /* compute atbarray = aseq^T * bseq */ 24799566063dSJacob Faibussowitsch PetscCall(MatTransposeMatMult(a->A, b->A, atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX, PETSC_DEFAULT, &atb->atb)); 2480cb20be35SHong Zhang 24819566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 2482cb20be35SHong Zhang 2483660d5466SHong Zhang /* arrange atbarray into sendbuf */ 24849566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(atb->atb, &atbarray)); 24859566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(atb->atb, &lda)); 2486637a0070SStefano Zampini for (proc = 0, k = 0; proc < size; proc++) { 2487baa3c1c6SHong Zhang for (j = 0; j < cN; j++) { 2488a1f9a5e6SStefano Zampini for (i = ranges[proc]; i < ranges[proc + 1]; i++) sendbuf[k++] = atbarray[i + j * lda]; 2489cb20be35SHong Zhang } 2490cb20be35SHong Zhang } 24919566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(atb->atb, &atbarray)); 2492637a0070SStefano Zampini 2493c5ef1628SHong Zhang /* sum all atbarray to local values of C */ 24949566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &carray)); 24959566063dSJacob Faibussowitsch PetscCallMPI(MPI_Reduce_scatter(sendbuf, carray, recvcounts, MPIU_SCALAR, MPIU_SUM, comm)); 24969566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &carray)); 24979566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 24989566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 2499cb20be35SHong Zhang PetscFunctionReturn(0); 2500cb20be35SHong Zhang } 2501cb20be35SHong Zhang 25029371c9d4SSatish Balay static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) { 2503cb20be35SHong Zhang MPI_Comm comm; 2504baa3c1c6SHong Zhang PetscMPIInt size; 2505660d5466SHong Zhang PetscInt cm = A->cmap->n, cM, cN = B->cmap->N; 2506baa3c1c6SHong Zhang Mat_TransMatMultDense *atb; 25076718818eSStefano Zampini PetscBool cisdense; 25080acaeb71SStefano Zampini PetscInt i; 25090acaeb71SStefano Zampini const PetscInt *ranges; 2510cb20be35SHong Zhang 2511cb20be35SHong Zhang PetscFunctionBegin; 25128f83a4d9SJacob Faibussowitsch MatCheckProduct(C, 4); 25135f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 25149566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 2515cb20be35SHong Zhang if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) { 251698921bdaSJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2517cb20be35SHong Zhang } 2518cb20be35SHong Zhang 25194222ddf1SHong Zhang /* create matrix product C */ 25209566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, cm, B->cmap->n, A->cmap->N, B->cmap->N)); 25219566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSECUDA, "")); 252248a46eb9SPierre Jolivet if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)A)->type_name)); 25239566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2524baa3c1c6SHong Zhang 25254222ddf1SHong Zhang /* create data structure for reuse C */ 25269566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 25279566063dSJacob Faibussowitsch PetscCall(PetscNew(&atb)); 25284222ddf1SHong Zhang cM = C->rmap->N; 25299566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(cM * cN, &atb->sendbuf, size, &atb->recvcounts)); 25309566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 25310acaeb71SStefano Zampini for (i = 0; i < size; i++) atb->recvcounts[i] = (ranges[i + 1] - ranges[i]) * cN; 2532baa3c1c6SHong Zhang 25336718818eSStefano Zampini C->product->data = atb; 25346718818eSStefano Zampini C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense; 2535cb20be35SHong Zhang PetscFunctionReturn(0); 2536cb20be35SHong Zhang } 2537cb20be35SHong Zhang 25389371c9d4SSatish Balay static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) { 2539cc48ffa7SToby Isaac MPI_Comm comm; 2540cc48ffa7SToby Isaac PetscMPIInt i, size; 2541cc48ffa7SToby Isaac PetscInt maxRows, bufsiz; 2542cc48ffa7SToby Isaac PetscMPIInt tag; 25434222ddf1SHong Zhang PetscInt alg; 2544cc48ffa7SToby Isaac Mat_MatTransMultDense *abt; 25454222ddf1SHong Zhang Mat_Product *product = C->product; 25464222ddf1SHong Zhang PetscBool flg; 2547cc48ffa7SToby Isaac 2548cc48ffa7SToby Isaac PetscFunctionBegin; 25496718818eSStefano Zampini MatCheckProduct(C, 4); 25505f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 25514222ddf1SHong Zhang /* check local size of A and B */ 25525f80ce2aSJacob Faibussowitsch PetscCheck(A->cmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")", A->cmap->n, B->cmap->n); 2553cc48ffa7SToby Isaac 25549566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "allgatherv", &flg)); 2555637a0070SStefano Zampini alg = flg ? 0 : 1; 2556cc48ffa7SToby Isaac 25574222ddf1SHong Zhang /* setup matrix product C */ 25589566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, A->rmap->n, B->rmap->n, A->rmap->N, B->rmap->N)); 25599566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATMPIDENSE)); 25609566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 25619566063dSJacob Faibussowitsch PetscCall(PetscObjectGetNewTag((PetscObject)C, &tag)); 25624222ddf1SHong Zhang 25634222ddf1SHong Zhang /* create data structure for reuse C */ 25649566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 25659566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 25669566063dSJacob Faibussowitsch PetscCall(PetscNew(&abt)); 2567cc48ffa7SToby Isaac abt->tag = tag; 2568faa55883SToby Isaac abt->alg = alg; 2569faa55883SToby Isaac switch (alg) { 25704222ddf1SHong Zhang case 1: /* alg: "cyclic" */ 2571cc48ffa7SToby Isaac for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i])); 2572cc48ffa7SToby Isaac bufsiz = A->cmap->N * maxRows; 25739566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(bufsiz, &(abt->buf[0]), bufsiz, &(abt->buf[1]))); 2574faa55883SToby Isaac break; 25754222ddf1SHong Zhang default: /* alg: "allgatherv" */ 25769566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &(abt->buf[0]), B->rmap->N * B->cmap->N, &(abt->buf[1]))); 25779566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(size, &(abt->recvcounts), size + 1, &(abt->recvdispls))); 2578faa55883SToby Isaac for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N; 2579faa55883SToby Isaac for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i]; 2580faa55883SToby Isaac break; 2581faa55883SToby Isaac } 2582cc48ffa7SToby Isaac 25836718818eSStefano Zampini C->product->data = abt; 25846718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense; 25854222ddf1SHong Zhang C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense; 2586cc48ffa7SToby Isaac PetscFunctionReturn(0); 2587cc48ffa7SToby Isaac } 2588cc48ffa7SToby Isaac 25899371c9d4SSatish Balay static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C) { 2590cc48ffa7SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 25916718818eSStefano Zampini Mat_MatTransMultDense *abt; 2592cc48ffa7SToby Isaac MPI_Comm comm; 2593cc48ffa7SToby Isaac PetscMPIInt rank, size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom; 2594f4259b30SLisandro Dalcin PetscScalar *sendbuf, *recvbuf = NULL, *cv; 2595cc48ffa7SToby Isaac PetscInt i, cK = A->cmap->N, k, j, bn; 2596cc48ffa7SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2597637a0070SStefano Zampini const PetscScalar *av, *bv; 259823fff9afSBarry Smith PetscBLASInt cm, cn, ck, alda, blda = 0, clda; 2599cc48ffa7SToby Isaac MPI_Request reqs[2]; 2600cc48ffa7SToby Isaac const PetscInt *ranges; 2601cc48ffa7SToby Isaac 2602cc48ffa7SToby Isaac PetscFunctionBegin; 26036718818eSStefano Zampini MatCheckProduct(C, 3); 26045f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 26056718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 26069566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 26079566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 26089566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 26099566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 26109566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 26119566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 26129566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 26139566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 26149566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &i)); 26159566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &blda)); 26169566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 26179566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 26189566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(B, &ranges)); 2619cc48ffa7SToby Isaac bn = B->rmap->n; 2620637a0070SStefano Zampini if (blda == bn) { 2621637a0070SStefano Zampini sendbuf = (PetscScalar *)bv; 2622cc48ffa7SToby Isaac } else { 2623cc48ffa7SToby Isaac sendbuf = abt->buf[0]; 2624cc48ffa7SToby Isaac for (k = 0, i = 0; i < cK; i++) { 2625ad540459SPierre Jolivet for (j = 0; j < bn; j++, k++) sendbuf[k] = bv[i * blda + j]; 2626cc48ffa7SToby Isaac } 2627cc48ffa7SToby Isaac } 2628cc48ffa7SToby Isaac if (size > 1) { 2629cc48ffa7SToby Isaac sendto = (rank + size - 1) % size; 2630cc48ffa7SToby Isaac recvfrom = (rank + size + 1) % size; 2631cc48ffa7SToby Isaac } else { 2632cc48ffa7SToby Isaac sendto = recvfrom = 0; 2633cc48ffa7SToby Isaac } 26349566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 26359566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 2636cc48ffa7SToby Isaac recvisfrom = rank; 2637cc48ffa7SToby Isaac for (i = 0; i < size; i++) { 2638cc48ffa7SToby Isaac /* we have finished receiving in sending, bufs can be read/modified */ 2639cc48ffa7SToby Isaac PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */ 2640cc48ffa7SToby Isaac PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom]; 2641cc48ffa7SToby Isaac 2642cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2643cc48ffa7SToby Isaac /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */ 2644cc48ffa7SToby Isaac sendsiz = cK * bn; 2645cc48ffa7SToby Isaac recvsiz = cK * nextbn; 2646cc48ffa7SToby Isaac recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1]; 26479566063dSJacob Faibussowitsch PetscCallMPI(MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0])); 26489566063dSJacob Faibussowitsch PetscCallMPI(MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1])); 2649cc48ffa7SToby Isaac } 2650cc48ffa7SToby Isaac 2651cc48ffa7SToby Isaac /* local aseq * sendbuf^T */ 26529566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn)); 2653792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "T", &cm, &cn, &ck, &_DOne, av, &alda, sendbuf, &cn, &_DZero, cv + clda * ranges[recvisfrom], &clda)); 2654cc48ffa7SToby Isaac 2655cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2656cc48ffa7SToby Isaac /* wait for the sends and receives to complete, swap sendbuf and recvbuf */ 26579566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE)); 2658cc48ffa7SToby Isaac } 2659cc48ffa7SToby Isaac bn = nextbn; 2660cc48ffa7SToby Isaac recvisfrom = nextrecvisfrom; 2661cc48ffa7SToby Isaac sendbuf = recvbuf; 2662cc48ffa7SToby Isaac } 26639566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 26649566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 26659566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 26669566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 26679566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 2668cc48ffa7SToby Isaac PetscFunctionReturn(0); 2669cc48ffa7SToby Isaac } 2670cc48ffa7SToby Isaac 26719371c9d4SSatish Balay static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C) { 2672faa55883SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 26736718818eSStefano Zampini Mat_MatTransMultDense *abt; 2674faa55883SToby Isaac MPI_Comm comm; 2675637a0070SStefano Zampini PetscMPIInt size; 2676637a0070SStefano Zampini PetscScalar *cv, *sendbuf, *recvbuf; 2677637a0070SStefano Zampini const PetscScalar *av, *bv; 2678637a0070SStefano Zampini PetscInt blda, i, cK = A->cmap->N, k, j, bn; 2679faa55883SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2680637a0070SStefano Zampini PetscBLASInt cm, cn, ck, alda, clda; 2681faa55883SToby Isaac 2682faa55883SToby Isaac PetscFunctionBegin; 26836718818eSStefano Zampini MatCheckProduct(C, 3); 26845f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 26856718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 26869566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 26879566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 26889566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 26899566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 26909566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 26919566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 26929566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 26939566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &blda)); 26949566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 26959566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 2696faa55883SToby Isaac /* copy transpose of B into buf[0] */ 2697faa55883SToby Isaac bn = B->rmap->n; 2698faa55883SToby Isaac sendbuf = abt->buf[0]; 2699faa55883SToby Isaac recvbuf = abt->buf[1]; 2700faa55883SToby Isaac for (k = 0, j = 0; j < bn; j++) { 2701ad540459SPierre Jolivet for (i = 0; i < cK; i++, k++) sendbuf[k] = bv[i * blda + j]; 2702faa55883SToby Isaac } 27039566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 27049566063dSJacob Faibussowitsch PetscCallMPI(MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm)); 27059566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 27069566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 27079566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->cmap->n, &cn)); 2708792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "N", &cm, &cn, &ck, &_DOne, av, &alda, recvbuf, &ck, &_DZero, cv, &clda)); 27099566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 27109566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 27119566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 27129566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 27139566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 2714faa55883SToby Isaac PetscFunctionReturn(0); 2715faa55883SToby Isaac } 2716faa55883SToby Isaac 27179371c9d4SSatish Balay static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) { 27186718818eSStefano Zampini Mat_MatTransMultDense *abt; 2719faa55883SToby Isaac 2720faa55883SToby Isaac PetscFunctionBegin; 27216718818eSStefano Zampini MatCheckProduct(C, 3); 27225f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 27236718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 2724faa55883SToby Isaac switch (abt->alg) { 27259371c9d4SSatish Balay case 1: PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C)); break; 27269371c9d4SSatish Balay default: PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C)); break; 2727faa55883SToby Isaac } 2728faa55883SToby Isaac PetscFunctionReturn(0); 2729faa55883SToby Isaac } 2730faa55883SToby Isaac 27319371c9d4SSatish Balay PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data) { 27326718818eSStefano Zampini Mat_MatMultDense *ab = (Mat_MatMultDense *)data; 2733320f2790SHong Zhang 2734320f2790SHong Zhang PetscFunctionBegin; 27359566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ce)); 27369566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ae)); 27379566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Be)); 27389566063dSJacob Faibussowitsch PetscCall(PetscFree(ab)); 2739320f2790SHong Zhang PetscFunctionReturn(0); 2740320f2790SHong Zhang } 2741320f2790SHong Zhang 27425242a7b1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 27439371c9d4SSatish Balay PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) { 27446718818eSStefano Zampini Mat_MatMultDense *ab; 2745320f2790SHong Zhang 2746320f2790SHong Zhang PetscFunctionBegin; 27476718818eSStefano Zampini MatCheckProduct(C, 3); 27485f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Missing product data"); 27496718818eSStefano Zampini ab = (Mat_MatMultDense *)C->product->data; 27509566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(A, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Ae)); 27519566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(B, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Be)); 27529566063dSJacob Faibussowitsch PetscCall(MatMatMultNumeric_Elemental(ab->Ae, ab->Be, ab->Ce)); 27539566063dSJacob Faibussowitsch PetscCall(MatConvert(ab->Ce, MATMPIDENSE, MAT_REUSE_MATRIX, &C)); 2754320f2790SHong Zhang PetscFunctionReturn(0); 2755320f2790SHong Zhang } 2756320f2790SHong Zhang 27579371c9d4SSatish Balay static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) { 2758320f2790SHong Zhang Mat Ae, Be, Ce; 2759320f2790SHong Zhang Mat_MatMultDense *ab; 2760320f2790SHong Zhang 2761320f2790SHong Zhang PetscFunctionBegin; 27626718818eSStefano Zampini MatCheckProduct(C, 4); 27635f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 27644222ddf1SHong Zhang /* check local size of A and B */ 2765320f2790SHong Zhang if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend) { 276698921bdaSJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2767320f2790SHong Zhang } 2768320f2790SHong Zhang 27694222ddf1SHong Zhang /* create elemental matrices Ae and Be */ 27709566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &Ae)); 27719566063dSJacob Faibussowitsch PetscCall(MatSetSizes(Ae, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 27729566063dSJacob Faibussowitsch PetscCall(MatSetType(Ae, MATELEMENTAL)); 27739566063dSJacob Faibussowitsch PetscCall(MatSetUp(Ae)); 27749566063dSJacob Faibussowitsch PetscCall(MatSetOption(Ae, MAT_ROW_ORIENTED, PETSC_FALSE)); 2775320f2790SHong Zhang 27769566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &Be)); 27779566063dSJacob Faibussowitsch PetscCall(MatSetSizes(Be, PETSC_DECIDE, PETSC_DECIDE, B->rmap->N, B->cmap->N)); 27789566063dSJacob Faibussowitsch PetscCall(MatSetType(Be, MATELEMENTAL)); 27799566063dSJacob Faibussowitsch PetscCall(MatSetUp(Be)); 27809566063dSJacob Faibussowitsch PetscCall(MatSetOption(Be, MAT_ROW_ORIENTED, PETSC_FALSE)); 2781320f2790SHong Zhang 27824222ddf1SHong Zhang /* compute symbolic Ce = Ae*Be */ 27839566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)C), &Ce)); 27849566063dSJacob Faibussowitsch PetscCall(MatMatMultSymbolic_Elemental(Ae, Be, fill, Ce)); 27854222ddf1SHong Zhang 27864222ddf1SHong Zhang /* setup C */ 27879566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, PETSC_DECIDE, PETSC_DECIDE)); 27889566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATDENSE)); 27899566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2790320f2790SHong Zhang 2791320f2790SHong Zhang /* create data structure for reuse Cdense */ 27929566063dSJacob Faibussowitsch PetscCall(PetscNew(&ab)); 2793320f2790SHong Zhang ab->Ae = Ae; 2794320f2790SHong Zhang ab->Be = Be; 2795320f2790SHong Zhang ab->Ce = Ce; 27966718818eSStefano Zampini 27976718818eSStefano Zampini C->product->data = ab; 27986718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense; 27994222ddf1SHong Zhang C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense; 2800320f2790SHong Zhang PetscFunctionReturn(0); 2801320f2790SHong Zhang } 28024222ddf1SHong Zhang #endif 28034222ddf1SHong Zhang /* ----------------------------------------------- */ 28044222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 28059371c9d4SSatish Balay static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C) { 2806320f2790SHong Zhang PetscFunctionBegin; 28074222ddf1SHong Zhang C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense; 28084222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_AB; 2809320f2790SHong Zhang PetscFunctionReturn(0); 2810320f2790SHong Zhang } 28115242a7b1SHong Zhang #endif 281286aefd0dSHong Zhang 28139371c9d4SSatish Balay static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C) { 28144222ddf1SHong Zhang Mat_Product *product = C->product; 28154222ddf1SHong Zhang Mat A = product->A, B = product->B; 28164222ddf1SHong Zhang 28174222ddf1SHong Zhang PetscFunctionBegin; 28184222ddf1SHong Zhang if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) 281998921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 28206718818eSStefano Zampini C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense; 28216718818eSStefano Zampini C->ops->productsymbolic = MatProductSymbolic_AtB; 28224222ddf1SHong Zhang PetscFunctionReturn(0); 28234222ddf1SHong Zhang } 28244222ddf1SHong Zhang 28259371c9d4SSatish Balay static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C) { 28264222ddf1SHong Zhang Mat_Product *product = C->product; 28274222ddf1SHong Zhang const char *algTypes[2] = {"allgatherv", "cyclic"}; 28284222ddf1SHong Zhang PetscInt alg, nalg = 2; 28294222ddf1SHong Zhang PetscBool flg = PETSC_FALSE; 28304222ddf1SHong Zhang 28314222ddf1SHong Zhang PetscFunctionBegin; 28324222ddf1SHong Zhang /* Set default algorithm */ 28334222ddf1SHong Zhang alg = 0; /* default is allgatherv */ 28349566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "default", &flg)); 283548a46eb9SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 28364222ddf1SHong Zhang 28374222ddf1SHong Zhang /* Get runtime option */ 28384222ddf1SHong Zhang if (product->api_user) { 2839d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatMatTransposeMult", "Mat"); 28409566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via", "Algorithmic approach", "MatMatTransposeMult", algTypes, nalg, algTypes[alg], &alg, &flg)); 2841d0609cedSBarry Smith PetscOptionsEnd(); 28424222ddf1SHong Zhang } else { 2843d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_ABt", "Mat"); 28449566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_ABt", algTypes, nalg, algTypes[alg], &alg, &flg)); 2845d0609cedSBarry Smith PetscOptionsEnd(); 28464222ddf1SHong Zhang } 284748a46eb9SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 28484222ddf1SHong Zhang 28494222ddf1SHong Zhang C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense; 28504222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_ABt; 28514222ddf1SHong Zhang PetscFunctionReturn(0); 28524222ddf1SHong Zhang } 28534222ddf1SHong Zhang 28549371c9d4SSatish Balay PETSC_INTERN PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C) { 28554222ddf1SHong Zhang Mat_Product *product = C->product; 28564222ddf1SHong Zhang 28574222ddf1SHong Zhang PetscFunctionBegin; 28584222ddf1SHong Zhang switch (product->type) { 28594222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 28609371c9d4SSatish Balay case MATPRODUCT_AB: PetscCall(MatProductSetFromOptions_MPIDense_AB(C)); break; 28614222ddf1SHong Zhang #endif 28629371c9d4SSatish Balay case MATPRODUCT_AtB: PetscCall(MatProductSetFromOptions_MPIDense_AtB(C)); break; 28639371c9d4SSatish Balay case MATPRODUCT_ABt: PetscCall(MatProductSetFromOptions_MPIDense_ABt(C)); break; 28649371c9d4SSatish Balay default: break; 28654222ddf1SHong Zhang } 28664222ddf1SHong Zhang PetscFunctionReturn(0); 28674222ddf1SHong Zhang } 2868