1ed3cc1f0SBarry Smith /* 2ed3cc1f0SBarry Smith Basic functions for basic parallel dense matrices. 347d993e7Ssuyashtn Portions of this code are under: 447d993e7Ssuyashtn Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved. 5ed3cc1f0SBarry Smith */ 6ed3cc1f0SBarry Smith 7c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h> /*I "petscmat.h" I*/ 88949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h> 9baa3c1c6SHong Zhang #include <petscblaslapack.h> 108965ea79SLois Curfman McInnes 11ab92ecdeSBarry Smith /*@ 1211a5261eSBarry Smith MatDenseGetLocalMatrix - For a `MATMPIDENSE` or `MATSEQDENSE` matrix returns the sequential 13ab92ecdeSBarry Smith matrix that represents the operator. For sequential matrices it returns itself. 14ab92ecdeSBarry Smith 15ab92ecdeSBarry Smith Input Parameter: 162ef1f0ffSBarry Smith . A - the sequential or MPI `MATDENSE` matrix 17ab92ecdeSBarry Smith 18ab92ecdeSBarry Smith Output Parameter: 19ab92ecdeSBarry Smith . B - the inner matrix 20ab92ecdeSBarry Smith 218e6c10adSSatish Balay Level: intermediate 228e6c10adSSatish Balay 231cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MATMPIDENSE`, `MATSEQDENSE` 24ab92ecdeSBarry Smith @*/ 25d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetLocalMatrix(Mat A, Mat *B) 26d71ae5a4SJacob Faibussowitsch { 27ab92ecdeSBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 28ace3abfcSBarry Smith PetscBool flg; 29ab92ecdeSBarry Smith 30ab92ecdeSBarry Smith PetscFunctionBegin; 31d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 324f572ea9SToby Isaac PetscAssertPointer(B, 2); 339566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATMPIDENSE, &flg)); 342205254eSKarl Rupp if (flg) *B = mat->A; 35f140bc17SStefano Zampini else { 369566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATSEQDENSE, &flg)); 3728b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for matrix type %s", ((PetscObject)A)->type_name); 38f140bc17SStefano Zampini *B = A; 39f140bc17SStefano Zampini } 403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 41ab92ecdeSBarry Smith } 42ab92ecdeSBarry Smith 4366976f2fSJacob Faibussowitsch static PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s) 44d71ae5a4SJacob Faibussowitsch { 45a76f77c3SStefano Zampini Mat_MPIDense *Amat = (Mat_MPIDense *)A->data; 46a76f77c3SStefano Zampini Mat_MPIDense *Bmat = (Mat_MPIDense *)B->data; 47a76f77c3SStefano Zampini 48a76f77c3SStefano Zampini PetscFunctionBegin; 499566063dSJacob Faibussowitsch PetscCall(MatCopy(Amat->A, Bmat->A, s)); 503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 51a76f77c3SStefano Zampini } 52a76f77c3SStefano Zampini 53d71ae5a4SJacob Faibussowitsch PetscErrorCode MatShift_MPIDense(Mat A, PetscScalar alpha) 54d71ae5a4SJacob Faibussowitsch { 552f605a99SJose E. Roman Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 562f605a99SJose E. Roman PetscInt j, lda, rstart = A->rmap->rstart, rend = A->rmap->rend, rend2; 572f605a99SJose E. Roman PetscScalar *v; 582f605a99SJose E. Roman 592f605a99SJose E. Roman PetscFunctionBegin; 602f605a99SJose E. Roman PetscCall(MatDenseGetArray(mat->A, &v)); 612f605a99SJose E. Roman PetscCall(MatDenseGetLDA(mat->A, &lda)); 622f605a99SJose E. Roman rend2 = PetscMin(rend, A->cmap->N); 632f605a99SJose E. Roman if (rend2 > rstart) { 642f605a99SJose E. Roman for (j = rstart; j < rend2; j++) v[j - rstart + j * lda] += alpha; 652f605a99SJose E. Roman PetscCall(PetscLogFlops(rend2 - rstart)); 662f605a99SJose E. Roman } 672f605a99SJose E. Roman PetscCall(MatDenseRestoreArray(mat->A, &v)); 683ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 692f605a99SJose E. Roman } 702f605a99SJose E. Roman 7166976f2fSJacob Faibussowitsch static PetscErrorCode MatGetRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 72d71ae5a4SJacob Faibussowitsch { 73ba8c8a56SBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 74d0f46423SBarry Smith PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 75ba8c8a56SBarry Smith 76ba8c8a56SBarry Smith PetscFunctionBegin; 77aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 78ba8c8a56SBarry Smith lrow = row - rstart; 799566063dSJacob Faibussowitsch PetscCall(MatGetRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 81ba8c8a56SBarry Smith } 82ba8c8a56SBarry Smith 8366976f2fSJacob Faibussowitsch static PetscErrorCode MatRestoreRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 84d71ae5a4SJacob Faibussowitsch { 85637a0070SStefano Zampini Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 86637a0070SStefano Zampini PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 87ba8c8a56SBarry Smith 88ba8c8a56SBarry Smith PetscFunctionBegin; 89aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 90637a0070SStefano Zampini lrow = row - rstart; 919566063dSJacob Faibussowitsch PetscCall(MatRestoreRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 93ba8c8a56SBarry Smith } 94ba8c8a56SBarry Smith 9566976f2fSJacob Faibussowitsch static PetscErrorCode MatGetDiagonalBlock_MPIDense(Mat A, Mat *a) 96d71ae5a4SJacob Faibussowitsch { 970de54da6SSatish Balay Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 98d0f46423SBarry Smith PetscInt m = A->rmap->n, rstart = A->rmap->rstart; 9987828ca2SBarry Smith PetscScalar *array; 1000de54da6SSatish Balay MPI_Comm comm; 1014b6ae80fSStefano Zampini PetscBool flg; 10211bd1e4dSLisandro Dalcin Mat B; 1030de54da6SSatish Balay 1040de54da6SSatish Balay PetscFunctionBegin; 1059566063dSJacob Faibussowitsch PetscCall(MatHasCongruentLayouts(A, &flg)); 10628b400f6SJacob Faibussowitsch PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only square matrices supported."); 1079566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery((PetscObject)A, "DiagonalBlock", (PetscObject *)&B)); 108616b8fbbSStefano Zampini if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */ 109a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 1109566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSECUDA, &flg)); 11128b400f6SJacob Faibussowitsch PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSECUDA); 112a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 11347d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSEHIP, &flg)); 11447d993e7Ssuyashtn PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSEHIP); 11547d993e7Ssuyashtn #endif 1169566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)(mdn->A), &comm)); 1179566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &B)); 1189566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, m, m, m, m)); 1199566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)mdn->A)->type_name)); 1209566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, (const PetscScalar **)&array)); 1219566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(B, array + m * rstart)); 1229566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, (const PetscScalar **)&array)); 1239566063dSJacob Faibussowitsch PetscCall(PetscObjectCompose((PetscObject)A, "DiagonalBlock", (PetscObject)B)); 12411bd1e4dSLisandro Dalcin *a = B; 1259566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 1262205254eSKarl Rupp } else *a = B; 1273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1280de54da6SSatish Balay } 1290de54da6SSatish Balay 13066976f2fSJacob Faibussowitsch static PetscErrorCode MatSetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv) 131d71ae5a4SJacob Faibussowitsch { 13239b7565bSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)mat->data; 133d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 134ace3abfcSBarry Smith PetscBool roworiented = A->roworiented; 1358965ea79SLois Curfman McInnes 1363a40ed3dSBarry Smith PetscFunctionBegin; 1378965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 1385ef9f2a5SBarry Smith if (idxm[i] < 0) continue; 13908401ef6SPierre Jolivet PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 1408965ea79SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 1418965ea79SLois Curfman McInnes row = idxm[i] - rstart; 14239b7565bSBarry Smith if (roworiented) { 1439566063dSJacob Faibussowitsch PetscCall(MatSetValues(A->A, 1, &row, n, idxn, v + i * n, addv)); 1443a40ed3dSBarry Smith } else { 1458965ea79SLois Curfman McInnes for (j = 0; j < n; j++) { 1465ef9f2a5SBarry Smith if (idxn[j] < 0) continue; 14708401ef6SPierre Jolivet PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1489566063dSJacob Faibussowitsch PetscCall(MatSetValues(A->A, 1, &row, 1, &idxn[j], v + i + j * m, addv)); 14939b7565bSBarry Smith } 1508965ea79SLois Curfman McInnes } 1512205254eSKarl Rupp } else if (!A->donotstash) { 1525080c13bSMatthew G Knepley mat->assembled = PETSC_FALSE; 15339b7565bSBarry Smith if (roworiented) { 1549566063dSJacob Faibussowitsch PetscCall(MatStashValuesRow_Private(&mat->stash, idxm[i], n, idxn, v + i * n, PETSC_FALSE)); 155d36fbae8SSatish Balay } else { 1569566063dSJacob Faibussowitsch PetscCall(MatStashValuesCol_Private(&mat->stash, idxm[i], n, idxn, v + i, m, PETSC_FALSE)); 15739b7565bSBarry Smith } 158b49de8d1SLois Curfman McInnes } 159b49de8d1SLois Curfman McInnes } 1603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 161b49de8d1SLois Curfman McInnes } 162b49de8d1SLois Curfman McInnes 16366976f2fSJacob Faibussowitsch static PetscErrorCode MatGetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], PetscScalar v[]) 164d71ae5a4SJacob Faibussowitsch { 165b49de8d1SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 166d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 167b49de8d1SLois Curfman McInnes 1683a40ed3dSBarry Smith PetscFunctionBegin; 169b49de8d1SLois Curfman McInnes for (i = 0; i < m; i++) { 17054c59aa7SJacob Faibussowitsch if (idxm[i] < 0) continue; /* negative row */ 17154c59aa7SJacob Faibussowitsch PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 172b49de8d1SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 173b49de8d1SLois Curfman McInnes row = idxm[i] - rstart; 174b49de8d1SLois Curfman McInnes for (j = 0; j < n; j++) { 17554c59aa7SJacob Faibussowitsch if (idxn[j] < 0) continue; /* negative column */ 17654c59aa7SJacob Faibussowitsch PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1779566063dSJacob Faibussowitsch PetscCall(MatGetValues(mdn->A, 1, &row, 1, &idxn[j], v + i * n + j)); 178b49de8d1SLois Curfman McInnes } 179e7e72b3dSBarry Smith } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Only local values currently supported"); 1808965ea79SLois Curfman McInnes } 1813ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1828965ea79SLois Curfman McInnes } 1838965ea79SLois Curfman McInnes 184d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A, PetscInt *lda) 185d71ae5a4SJacob Faibussowitsch { 18649a6ff4bSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 18749a6ff4bSBarry Smith 18849a6ff4bSBarry Smith PetscFunctionBegin; 1899566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, lda)); 1903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19149a6ff4bSBarry Smith } 19249a6ff4bSBarry Smith 193d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A, PetscInt lda) 194d71ae5a4SJacob Faibussowitsch { 195ad16ce7aSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 19647d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 197ad16ce7aSStefano Zampini 198ad16ce7aSStefano Zampini PetscFunctionBegin; 19917359960SJose E. Roman if (!a->A) { 20028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2019566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 2029566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 2039566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 2049566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N)); 205a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 20647d993e7Ssuyashtn PetscBool iscuda; 2079566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda)); 20847d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 209a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 21047d993e7Ssuyashtn PetscBool iship; 21147d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSEHIP, &iship)); 21247d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 21347d993e7Ssuyashtn #endif 21447d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 21517359960SJose E. Roman } 2169566063dSJacob Faibussowitsch PetscCall(MatDenseSetLDA(a->A, lda)); 2173ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 218ad16ce7aSStefano Zampini } 219ad16ce7aSStefano Zampini 220d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArray_MPIDense(Mat A, PetscScalar **array) 221d71ae5a4SJacob Faibussowitsch { 222ff14e315SSatish Balay Mat_MPIDense *a = (Mat_MPIDense *)A->data; 223ff14e315SSatish Balay 2243a40ed3dSBarry Smith PetscFunctionBegin; 22528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2269566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, array)); 2273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 228ff14e315SSatish Balay } 229ff14e315SSatish Balay 230d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A, const PetscScalar **array) 231d71ae5a4SJacob Faibussowitsch { 2328572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2338572280aSBarry Smith 2348572280aSBarry Smith PetscFunctionBegin; 23528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2369566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, array)); 2373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2388572280aSBarry Smith } 2398572280aSBarry Smith 240d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A, PetscScalar **array) 241d71ae5a4SJacob Faibussowitsch { 2426947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2436947451fSStefano Zampini 2446947451fSStefano Zampini PetscFunctionBegin; 24528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2469566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, array)); 2473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2486947451fSStefano Zampini } 2496947451fSStefano Zampini 250d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A, const PetscScalar *array) 251d71ae5a4SJacob Faibussowitsch { 252d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 253d3042a70SBarry Smith 254d3042a70SBarry Smith PetscFunctionBegin; 25528b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 25628b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2579566063dSJacob Faibussowitsch PetscCall(MatDensePlaceArray(a->A, array)); 2583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 259d3042a70SBarry Smith } 260d3042a70SBarry Smith 261d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseResetArray_MPIDense(Mat A) 262d71ae5a4SJacob Faibussowitsch { 263d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 264d3042a70SBarry Smith 265d3042a70SBarry Smith PetscFunctionBegin; 26628b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 26728b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2689566063dSJacob Faibussowitsch PetscCall(MatDenseResetArray(a->A)); 2693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 270d3042a70SBarry Smith } 271d3042a70SBarry Smith 272d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A, const PetscScalar *array) 273d71ae5a4SJacob Faibussowitsch { 274d5ea218eSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 275d5ea218eSStefano Zampini 276d5ea218eSStefano Zampini PetscFunctionBegin; 27728b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 27828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2799566063dSJacob Faibussowitsch PetscCall(MatDenseReplaceArray(a->A, array)); 2803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 281d5ea218eSStefano Zampini } 282d5ea218eSStefano Zampini 283d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A, IS isrow, IS iscol, MatReuse scall, Mat *B) 284d71ae5a4SJacob Faibussowitsch { 285ca3fa75bSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data, *newmatd; 286637a0070SStefano Zampini PetscInt lda, i, j, rstart, rend, nrows, ncols, Ncols, nlrows, nlcols; 2875d0c19d7SBarry Smith const PetscInt *irow, *icol; 288637a0070SStefano Zampini const PetscScalar *v; 289637a0070SStefano Zampini PetscScalar *bv; 290ca3fa75bSLois Curfman McInnes Mat newmat; 2914aa3045dSJed Brown IS iscol_local; 29242a884f0SBarry Smith MPI_Comm comm_is, comm_mat; 293ca3fa75bSLois Curfman McInnes 294ca3fa75bSLois Curfman McInnes PetscFunctionBegin; 2959566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm_mat)); 2969566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)iscol, &comm_is)); 29708401ef6SPierre Jolivet PetscCheck(comm_mat == comm_is, PETSC_COMM_SELF, PETSC_ERR_ARG_NOTSAMECOMM, "IS communicator must match matrix communicator"); 29842a884f0SBarry Smith 2999566063dSJacob Faibussowitsch PetscCall(ISAllGather(iscol, &iscol_local)); 3009566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &irow)); 3019566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol_local, &icol)); 3029566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(isrow, &nrows)); 3039566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(iscol, &ncols)); 3049566063dSJacob Faibussowitsch PetscCall(ISGetSize(iscol, &Ncols)); /* global number of columns, size of iscol_local */ 305ca3fa75bSLois Curfman McInnes 306ca3fa75bSLois Curfman McInnes /* No parallel redistribution currently supported! Should really check each index set 307da81f932SPierre Jolivet to confirm that it is OK. ... Currently supports only submatrix same partitioning as 3087eba5e9cSLois Curfman McInnes original matrix! */ 309ca3fa75bSLois Curfman McInnes 3109566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &nlrows, &nlcols)); 3119566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRange(A, &rstart, &rend)); 312ca3fa75bSLois Curfman McInnes 313ca3fa75bSLois Curfman McInnes /* Check submatrix call */ 314ca3fa75bSLois Curfman McInnes if (scall == MAT_REUSE_MATRIX) { 315e32f2f54SBarry Smith /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */ 3167eba5e9cSLois Curfman McInnes /* Really need to test rows and column sizes! */ 317ca3fa75bSLois Curfman McInnes newmat = *B; 318ca3fa75bSLois Curfman McInnes } else { 319ca3fa75bSLois Curfman McInnes /* Create and fill new matrix */ 3209566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &newmat)); 3219566063dSJacob Faibussowitsch PetscCall(MatSetSizes(newmat, nrows, ncols, PETSC_DECIDE, Ncols)); 3229566063dSJacob Faibussowitsch PetscCall(MatSetType(newmat, ((PetscObject)A)->type_name)); 3239566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(newmat, NULL)); 324ca3fa75bSLois Curfman McInnes } 325ca3fa75bSLois Curfman McInnes 326ca3fa75bSLois Curfman McInnes /* Now extract the data pointers and do the copy, column at a time */ 327ca3fa75bSLois Curfman McInnes newmatd = (Mat_MPIDense *)newmat->data; 3289566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(newmatd->A, &bv)); 3299566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mat->A, &v)); 3309566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mat->A, &lda)); 3314aa3045dSJed Brown for (i = 0; i < Ncols; i++) { 332637a0070SStefano Zampini const PetscScalar *av = v + lda * icol[i]; 333ad540459SPierre Jolivet for (j = 0; j < nrows; j++) *bv++ = av[irow[j] - rstart]; 334ca3fa75bSLois Curfman McInnes } 3359566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mat->A, &v)); 3369566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(newmatd->A, &bv)); 337ca3fa75bSLois Curfman McInnes 338ca3fa75bSLois Curfman McInnes /* Assemble the matrices so that the correct flags are set */ 3399566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(newmat, MAT_FINAL_ASSEMBLY)); 3409566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(newmat, MAT_FINAL_ASSEMBLY)); 341ca3fa75bSLois Curfman McInnes 342ca3fa75bSLois Curfman McInnes /* Free work space */ 3439566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &irow)); 3449566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol_local, &icol)); 3459566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iscol_local)); 346ca3fa75bSLois Curfman McInnes *B = newmat; 3473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 348ca3fa75bSLois Curfman McInnes } 349ca3fa75bSLois Curfman McInnes 35066976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A, PetscScalar **array) 351d71ae5a4SJacob Faibussowitsch { 35273a71a0fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 35373a71a0fSBarry Smith 3543a40ed3dSBarry Smith PetscFunctionBegin; 3559566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, array)); 3563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 357ff14e315SSatish Balay } 358ff14e315SSatish Balay 35966976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A, const PetscScalar **array) 360d71ae5a4SJacob Faibussowitsch { 3618572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3628572280aSBarry Smith 3638572280aSBarry Smith PetscFunctionBegin; 3649566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, array)); 3653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3668572280aSBarry Smith } 3678572280aSBarry Smith 36866976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A, PetscScalar **array) 369d71ae5a4SJacob Faibussowitsch { 3706947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3716947451fSStefano Zampini 3726947451fSStefano Zampini PetscFunctionBegin; 3739566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, array)); 3743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3756947451fSStefano Zampini } 3766947451fSStefano Zampini 37766976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat, MatAssemblyType mode) 378d71ae5a4SJacob Faibussowitsch { 37939ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 38013f74950SBarry Smith PetscInt nstash, reallocs; 3818965ea79SLois Curfman McInnes 3823a40ed3dSBarry Smith PetscFunctionBegin; 3833ba16761SJacob Faibussowitsch if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(PETSC_SUCCESS); 3848965ea79SLois Curfman McInnes 3859566063dSJacob Faibussowitsch PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); 3869566063dSJacob Faibussowitsch PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); 3879566063dSJacob Faibussowitsch PetscCall(PetscInfo(mdn->A, "Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n", nstash, reallocs)); 3883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3898965ea79SLois Curfman McInnes } 3908965ea79SLois Curfman McInnes 39166976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat, MatAssemblyType mode) 392d71ae5a4SJacob Faibussowitsch { 39339ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 39413f74950SBarry Smith PetscInt i, *row, *col, flg, j, rstart, ncols; 39513f74950SBarry Smith PetscMPIInt n; 39687828ca2SBarry Smith PetscScalar *val; 3978965ea79SLois Curfman McInnes 3983a40ed3dSBarry Smith PetscFunctionBegin; 399910cf402Sprj- if (!mdn->donotstash && !mat->nooffprocentries) { 4008965ea79SLois Curfman McInnes /* wait on receives */ 4017ef1d9bdSSatish Balay while (1) { 4029566063dSJacob Faibussowitsch PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); 4037ef1d9bdSSatish Balay if (!flg) break; 4048965ea79SLois Curfman McInnes 4057ef1d9bdSSatish Balay for (i = 0; i < n;) { 4067ef1d9bdSSatish Balay /* Now identify the consecutive vals belonging to the same row */ 4072205254eSKarl Rupp for (j = i, rstart = row[j]; j < n; j++) { 4082205254eSKarl Rupp if (row[j] != rstart) break; 4092205254eSKarl Rupp } 4107ef1d9bdSSatish Balay if (j < n) ncols = j - i; 4117ef1d9bdSSatish Balay else ncols = n - i; 4127ef1d9bdSSatish Balay /* Now assemble all these values with a single function call */ 4139566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(mat, 1, row + i, ncols, col + i, val + i, mat->insertmode)); 4147ef1d9bdSSatish Balay i = j; 4158965ea79SLois Curfman McInnes } 4167ef1d9bdSSatish Balay } 4179566063dSJacob Faibussowitsch PetscCall(MatStashScatterEnd_Private(&mat->stash)); 418910cf402Sprj- } 4198965ea79SLois Curfman McInnes 4209566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mdn->A, mode)); 4219566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mdn->A, mode)); 4223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4238965ea79SLois Curfman McInnes } 4248965ea79SLois Curfman McInnes 42566976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroEntries_MPIDense(Mat A) 426d71ae5a4SJacob Faibussowitsch { 42739ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 4283a40ed3dSBarry Smith 4293a40ed3dSBarry Smith PetscFunctionBegin; 4309566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(l->A)); 4313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4328965ea79SLois Curfman McInnes } 4338965ea79SLois Curfman McInnes 43466976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroRows_MPIDense(Mat A, PetscInt n, const PetscInt rows[], PetscScalar diag, Vec x, Vec b) 435d71ae5a4SJacob Faibussowitsch { 43639ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 437637a0070SStefano Zampini PetscInt i, len, *lrows; 438637a0070SStefano Zampini 439637a0070SStefano Zampini PetscFunctionBegin; 440637a0070SStefano Zampini /* get locally owned rows */ 4419566063dSJacob Faibussowitsch PetscCall(PetscLayoutMapLocal(A->rmap, n, rows, &len, &lrows, NULL)); 442637a0070SStefano Zampini /* fix right hand side if needed */ 443637a0070SStefano Zampini if (x && b) { 44497b48c8fSBarry Smith const PetscScalar *xx; 44597b48c8fSBarry Smith PetscScalar *bb; 4468965ea79SLois Curfman McInnes 4479566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(x, &xx)); 4489566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(b, &bb)); 449637a0070SStefano Zampini for (i = 0; i < len; ++i) bb[lrows[i]] = diag * xx[lrows[i]]; 4509566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(x, &xx)); 4519566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(b, &bb)); 45297b48c8fSBarry Smith } 4539566063dSJacob Faibussowitsch PetscCall(MatZeroRows(l->A, len, lrows, 0.0, NULL, NULL)); 454e2eb51b1SBarry Smith if (diag != 0.0) { 455637a0070SStefano Zampini Vec d; 456b9679d65SBarry Smith 4579566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A, NULL, &d)); 4589566063dSJacob Faibussowitsch PetscCall(VecSet(d, diag)); 4599566063dSJacob Faibussowitsch PetscCall(MatDiagonalSet(A, d, INSERT_VALUES)); 4609566063dSJacob Faibussowitsch PetscCall(VecDestroy(&d)); 461b9679d65SBarry Smith } 4629566063dSJacob Faibussowitsch PetscCall(PetscFree(lrows)); 4633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4648965ea79SLois Curfman McInnes } 4658965ea79SLois Curfman McInnes 46666976f2fSJacob Faibussowitsch static PetscErrorCode MatMult_MPIDense(Mat mat, Vec xx, Vec yy) 467d71ae5a4SJacob Faibussowitsch { 46839ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 469637a0070SStefano Zampini const PetscScalar *ax; 470637a0070SStefano Zampini PetscScalar *ay; 471d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 472c456f294SBarry Smith 4733a40ed3dSBarry Smith PetscFunctionBegin; 4746f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 4759566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 4769566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 4779566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 4789566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 4799566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 4809566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 4819566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->mult)(mdn->A, mdn->lvec, yy)); 4823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4838965ea79SLois Curfman McInnes } 4848965ea79SLois Curfman McInnes 48566976f2fSJacob Faibussowitsch static PetscErrorCode MatMultAdd_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz) 486d71ae5a4SJacob Faibussowitsch { 48739ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 488637a0070SStefano Zampini const PetscScalar *ax; 489637a0070SStefano Zampini PetscScalar *ay; 490d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 491c456f294SBarry Smith 4923a40ed3dSBarry Smith PetscFunctionBegin; 4936f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 4949566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 4959566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 4969566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 4979566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 4989566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 4999566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5009566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->multadd)(mdn->A, mdn->lvec, yy, zz)); 5013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5028965ea79SLois Curfman McInnes } 5038965ea79SLois Curfman McInnes 504*459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeKernel_MPIDense(Mat A, Vec xx, Vec yy, PetscBool herm) 505d71ae5a4SJacob Faibussowitsch { 506096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 507637a0070SStefano Zampini const PetscScalar *ax; 508637a0070SStefano Zampini PetscScalar *ay; 509d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 5103a40ed3dSBarry Smith PetscFunctionBegin; 5116f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 5129566063dSJacob Faibussowitsch PetscCall(VecSet(yy, 0.0)); 513*459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 514*459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 5159566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5169566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 5179566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5189566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5199566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5209566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 5213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 522096963f5SLois Curfman McInnes } 523096963f5SLois Curfman McInnes 524*459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAddKernel_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscBool herm) 525d71ae5a4SJacob Faibussowitsch { 526096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 527637a0070SStefano Zampini const PetscScalar *ax; 528637a0070SStefano Zampini PetscScalar *ay; 529d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 530096963f5SLois Curfman McInnes 5313a40ed3dSBarry Smith PetscFunctionBegin; 5326f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 5339566063dSJacob Faibussowitsch PetscCall(VecCopy(yy, zz)); 534*459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 535*459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 5369566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5379566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 5389566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5399566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5409566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5419566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 5423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 543096963f5SLois Curfman McInnes } 544096963f5SLois Curfman McInnes 545*459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTranspose_MPIDense(Mat A, Vec xx, Vec yy) 546*459e8d23SBlanca Mellado Pinto { 547*459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 548*459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_FALSE)); 549*459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 550*459e8d23SBlanca Mellado Pinto } 551*459e8d23SBlanca Mellado Pinto 552*459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 553*459e8d23SBlanca Mellado Pinto { 554*459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 555*459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_FALSE)); 556*459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 557*459e8d23SBlanca Mellado Pinto } 558*459e8d23SBlanca Mellado Pinto 559*459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTranspose_MPIDense(Mat A, Vec xx, Vec yy) 560*459e8d23SBlanca Mellado Pinto { 561*459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 562*459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_TRUE)); 563*459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 564*459e8d23SBlanca Mellado Pinto } 565*459e8d23SBlanca Mellado Pinto 566*459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 567*459e8d23SBlanca Mellado Pinto { 568*459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 569*459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_TRUE)); 570*459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 571*459e8d23SBlanca Mellado Pinto } 572*459e8d23SBlanca Mellado Pinto 573d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetDiagonal_MPIDense(Mat A, Vec v) 574d71ae5a4SJacob Faibussowitsch { 57539ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 57679560b15SJacob Faibussowitsch PetscInt lda, len, i, nl, ng, m = A->rmap->n, radd; 57779560b15SJacob Faibussowitsch PetscScalar *x; 578637a0070SStefano Zampini const PetscScalar *av; 579ed3cc1f0SBarry Smith 5803a40ed3dSBarry Smith PetscFunctionBegin; 5819566063dSJacob Faibussowitsch PetscCall(VecGetArray(v, &x)); 58279560b15SJacob Faibussowitsch PetscCall(VecGetSize(v, &ng)); 58379560b15SJacob Faibussowitsch PetscCheck(ng == A->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming mat and vec"); 58479560b15SJacob Faibussowitsch PetscCall(VecGetLocalSize(v, &nl)); 585d0f46423SBarry Smith len = PetscMin(a->A->rmap->n, a->A->cmap->n); 586d0f46423SBarry Smith radd = A->rmap->rstart * m; 5879566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 5889566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 589ad540459SPierre Jolivet for (i = 0; i < len; i++) x[i] = av[radd + i * lda + i]; 5909566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 59179560b15SJacob Faibussowitsch PetscCall(PetscArrayzero(x + i, nl - i)); 5929566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(v, &x)); 5933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5948965ea79SLois Curfman McInnes } 5958965ea79SLois Curfman McInnes 59666976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MPIDense(Mat mat) 597d71ae5a4SJacob Faibussowitsch { 5983501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 599ed3cc1f0SBarry Smith 6003a40ed3dSBarry Smith PetscFunctionBegin; 6013ba16761SJacob Faibussowitsch PetscCall(PetscLogObjectState((PetscObject)mat, "Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT, mat->rmap->N, mat->cmap->N)); 6029566063dSJacob Faibussowitsch PetscCall(MatStashDestroy_Private(&mat->stash)); 60328b400f6SJacob Faibussowitsch PetscCheck(!mdn->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 60428b400f6SJacob Faibussowitsch PetscCheck(!mdn->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 6059566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->A)); 6069566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->lvec)); 6079566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&mdn->Mvctx)); 6089566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->cvec)); 6099566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->cmat)); 61001b82886SBarry Smith 6119566063dSJacob Faibussowitsch PetscCall(PetscFree(mat->data)); 6129566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, NULL)); 6138baccfbdSHong Zhang 6149566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", NULL)); 6159566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", NULL)); 6169566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", NULL)); 6179566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", NULL)); 6189566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", NULL)); 6199566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", NULL)); 6209566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", NULL)); 6219566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", NULL)); 6229566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", NULL)); 6239566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", NULL)); 6249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", NULL)); 6259566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", NULL)); 6269566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", NULL)); 6278baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 6289566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", NULL)); 6298baccfbdSHong Zhang #endif 630d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 6319566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", NULL)); 632d24d4204SJose E. Roman #endif 6339566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", NULL)); 6349566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", NULL)); 6359566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", NULL)); 6366718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 6379566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", NULL)); 6389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", NULL)); 6392e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", NULL)); 6402e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensecuda_mpidense_C", NULL)); 6412e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL)); 6422e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL)); 6432e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL)); 6442e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL)); 6452e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArray_C", NULL)); 6462e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayRead_C", NULL)); 6472e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayWrite_C", NULL)); 6482e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArray_C", NULL)); 6492e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayRead_C", NULL)); 6502e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayWrite_C", NULL)); 6512e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAPlaceArray_C", NULL)); 6522e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAResetArray_C", NULL)); 6532e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAReplaceArray_C", NULL)); 6543d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDASetPreallocation_C", NULL)); 6556718818eSStefano Zampini #endif 65647d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 65747d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", NULL)); 65847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", NULL)); 65947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", NULL)); 66047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensehip_mpidense_C", NULL)); 66147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensehip_C", NULL)); 66247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidensehip_C", NULL)); 66347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaij_C", NULL)); 66447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaijhipsparse_C", NULL)); 66547d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArray_C", NULL)); 66647d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayRead_C", NULL)); 66747d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayWrite_C", NULL)); 66847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArray_C", NULL)); 66947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayRead_C", NULL)); 67047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayWrite_C", NULL)); 67147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPPlaceArray_C", NULL)); 67247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPResetArray_C", NULL)); 67347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPReplaceArray_C", NULL)); 6743d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPSetPreallocation_C", NULL)); 67547d993e7Ssuyashtn #endif 6769566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", NULL)); 6779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", NULL)); 6789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", NULL)); 6799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", NULL)); 6809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", NULL)); 6819566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", NULL)); 6829566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", NULL)); 6839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", NULL)); 6849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", NULL)); 6859566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", NULL)); 686f8103e6bSStefano Zampini 687f8103e6bSStefano Zampini PetscCall(PetscObjectCompose((PetscObject)mat, "DiagonalBlock", NULL)); 6883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6898965ea79SLois Curfman McInnes } 69039ddd567SLois Curfman McInnes 6919804daf3SBarry Smith #include <petscdraw.h> 692d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat, PetscViewer viewer) 693d71ae5a4SJacob Faibussowitsch { 69439ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 695616b8fbbSStefano Zampini PetscMPIInt rank; 69619fd82e9SBarry Smith PetscViewerType vtype; 697ace3abfcSBarry Smith PetscBool iascii, isdraw; 698b0a32e0cSBarry Smith PetscViewer sviewer; 699f3ef73ceSBarry Smith PetscViewerFormat format; 7008965ea79SLois Curfman McInnes 7013a40ed3dSBarry Smith PetscFunctionBegin; 7029566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat), &rank)); 7039566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 7049566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 70532077d6dSBarry Smith if (iascii) { 7069566063dSJacob Faibussowitsch PetscCall(PetscViewerGetType(viewer, &vtype)); 7079566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 708456192e2SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 7094e220ebcSLois Curfman McInnes MatInfo info; 7109566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mat, MAT_LOCAL, &info)); 7119566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 7129371c9d4SSatish Balay PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, " [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n", rank, mat->rmap->n, (PetscInt)info.nz_used, (PetscInt)info.nz_allocated, 7139371c9d4SSatish Balay (PetscInt)info.memory)); 7149566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 7159566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 7166f08ad05SPierre Jolivet if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx, viewer)); 7173ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 718fb9695e5SSatish Balay } else if (format == PETSC_VIEWER_ASCII_INFO) { 7193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7208965ea79SLois Curfman McInnes } 721f1af5d2fSBarry Smith } else if (isdraw) { 722b0a32e0cSBarry Smith PetscDraw draw; 723ace3abfcSBarry Smith PetscBool isnull; 724f1af5d2fSBarry Smith 7259566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw)); 7269566063dSJacob Faibussowitsch PetscCall(PetscDrawIsNull(draw, &isnull)); 7273ba16761SJacob Faibussowitsch if (isnull) PetscFunctionReturn(PETSC_SUCCESS); 728f1af5d2fSBarry Smith } 72977ed5343SBarry Smith 7307da1fb6eSBarry Smith { 7318965ea79SLois Curfman McInnes /* assemble the entire matrix onto first processor. */ 7328965ea79SLois Curfman McInnes Mat A; 733d0f46423SBarry Smith PetscInt M = mat->rmap->N, N = mat->cmap->N, m, row, i, nz; 734ba8c8a56SBarry Smith PetscInt *cols; 735ba8c8a56SBarry Smith PetscScalar *vals; 7368965ea79SLois Curfman McInnes 7379566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &A)); 738dd400576SPatrick Sanan if (rank == 0) { 7399566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, M, N, M, N)); 7403a40ed3dSBarry Smith } else { 7419566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, 0, 0, M, N)); 7428965ea79SLois Curfman McInnes } 7437adad957SLisandro Dalcin /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */ 7449566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATMPIDENSE)); 7459566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 7468965ea79SLois Curfman McInnes 74739ddd567SLois Curfman McInnes /* Copy the matrix ... This isn't the most efficient means, 74839ddd567SLois Curfman McInnes but it's quick for now */ 74951022da4SBarry Smith A->insertmode = INSERT_VALUES; 7502205254eSKarl Rupp 7512205254eSKarl Rupp row = mat->rmap->rstart; 7522205254eSKarl Rupp m = mdn->A->rmap->n; 7538965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 7549566063dSJacob Faibussowitsch PetscCall(MatGetRow_MPIDense(mat, row, &nz, &cols, &vals)); 7559566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(A, 1, &row, nz, cols, vals, INSERT_VALUES)); 7569566063dSJacob Faibussowitsch PetscCall(MatRestoreRow_MPIDense(mat, row, &nz, &cols, &vals)); 75739ddd567SLois Curfman McInnes row++; 7588965ea79SLois Curfman McInnes } 7598965ea79SLois Curfman McInnes 7609566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 7619566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 7629566063dSJacob Faibussowitsch PetscCall(PetscViewerGetSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 763dd400576SPatrick Sanan if (rank == 0) { 7649566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense *)(A->data))->A, ((PetscObject)mat)->name)); 7659566063dSJacob Faibussowitsch PetscCall(MatView_SeqDense(((Mat_MPIDense *)(A->data))->A, sviewer)); 7668965ea79SLois Curfman McInnes } 7679566063dSJacob Faibussowitsch PetscCall(PetscViewerRestoreSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 7689566063dSJacob Faibussowitsch PetscCall(MatDestroy(&A)); 7698965ea79SLois Curfman McInnes } 7703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7718965ea79SLois Curfman McInnes } 7728965ea79SLois Curfman McInnes 77366976f2fSJacob Faibussowitsch static PetscErrorCode MatView_MPIDense(Mat mat, PetscViewer viewer) 774d71ae5a4SJacob Faibussowitsch { 775ace3abfcSBarry Smith PetscBool iascii, isbinary, isdraw, issocket; 7768965ea79SLois Curfman McInnes 777433994e6SBarry Smith PetscFunctionBegin; 7789566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 7799566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 7809566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSOCKET, &issocket)); 7819566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 7820f5bd95cSBarry Smith 78332077d6dSBarry Smith if (iascii || issocket || isdraw) { 7849566063dSJacob Faibussowitsch PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat, viewer)); 7851baa6e33SBarry Smith } else if (isbinary) PetscCall(MatView_Dense_Binary(mat, viewer)); 7863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7878965ea79SLois Curfman McInnes } 7888965ea79SLois Curfman McInnes 78966976f2fSJacob Faibussowitsch static PetscErrorCode MatGetInfo_MPIDense(Mat A, MatInfoType flag, MatInfo *info) 790d71ae5a4SJacob Faibussowitsch { 7913501a2bdSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 7923501a2bdSLois Curfman McInnes Mat mdn = mat->A; 7933966268fSBarry Smith PetscLogDouble isend[5], irecv[5]; 7948965ea79SLois Curfman McInnes 7953a40ed3dSBarry Smith PetscFunctionBegin; 7964e220ebcSLois Curfman McInnes info->block_size = 1.0; 7972205254eSKarl Rupp 7989566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mdn, MAT_LOCAL, info)); 7992205254eSKarl Rupp 8009371c9d4SSatish Balay isend[0] = info->nz_used; 8019371c9d4SSatish Balay isend[1] = info->nz_allocated; 8029371c9d4SSatish Balay isend[2] = info->nz_unneeded; 8039371c9d4SSatish Balay isend[3] = info->memory; 8049371c9d4SSatish Balay isend[4] = info->mallocs; 8058965ea79SLois Curfman McInnes if (flag == MAT_LOCAL) { 8064e220ebcSLois Curfman McInnes info->nz_used = isend[0]; 8074e220ebcSLois Curfman McInnes info->nz_allocated = isend[1]; 8084e220ebcSLois Curfman McInnes info->nz_unneeded = isend[2]; 8094e220ebcSLois Curfman McInnes info->memory = isend[3]; 8104e220ebcSLois Curfman McInnes info->mallocs = isend[4]; 8118965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_MAX) { 8121c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_MAX, PetscObjectComm((PetscObject)A))); 8132205254eSKarl Rupp 8144e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 8154e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 8164e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 8174e220ebcSLois Curfman McInnes info->memory = irecv[3]; 8184e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 8198965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_SUM) { 8201c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_SUM, PetscObjectComm((PetscObject)A))); 8212205254eSKarl Rupp 8224e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 8234e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 8244e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 8254e220ebcSLois Curfman McInnes info->memory = irecv[3]; 8264e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 8278965ea79SLois Curfman McInnes } 8284e220ebcSLois Curfman McInnes info->fill_ratio_given = 0; /* no parallel LU/ILU/Cholesky */ 8294e220ebcSLois Curfman McInnes info->fill_ratio_needed = 0; 8304e220ebcSLois Curfman McInnes info->factor_mallocs = 0; 8313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8328965ea79SLois Curfman McInnes } 8338965ea79SLois Curfman McInnes 83466976f2fSJacob Faibussowitsch static PetscErrorCode MatSetOption_MPIDense(Mat A, MatOption op, PetscBool flg) 835d71ae5a4SJacob Faibussowitsch { 83639ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 8378965ea79SLois Curfman McInnes 8383a40ed3dSBarry Smith PetscFunctionBegin; 83912c028f9SKris Buschelman switch (op) { 840512a5fc5SBarry Smith case MAT_NEW_NONZERO_LOCATIONS: 84112c028f9SKris Buschelman case MAT_NEW_NONZERO_LOCATION_ERR: 84212c028f9SKris Buschelman case MAT_NEW_NONZERO_ALLOCATION_ERR: 84343674050SBarry Smith MatCheckPreallocated(A, 1); 8449566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 84512c028f9SKris Buschelman break; 84612c028f9SKris Buschelman case MAT_ROW_ORIENTED: 84743674050SBarry Smith MatCheckPreallocated(A, 1); 8484e0d8c25SBarry Smith a->roworiented = flg; 8499566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 85012c028f9SKris Buschelman break; 8518c78258cSHong Zhang case MAT_FORCE_DIAGONAL_ENTRIES: 85213fa8e87SLisandro Dalcin case MAT_KEEP_NONZERO_PATTERN: 85312c028f9SKris Buschelman case MAT_USE_HASH_TABLE: 854d71ae5a4SJacob Faibussowitsch case MAT_SORTED_FULL: 855d71ae5a4SJacob Faibussowitsch PetscCall(PetscInfo(A, "Option %s ignored\n", MatOptions[op])); 856d71ae5a4SJacob Faibussowitsch break; 857d71ae5a4SJacob Faibussowitsch case MAT_IGNORE_OFF_PROC_ENTRIES: 858d71ae5a4SJacob Faibussowitsch a->donotstash = flg; 859d71ae5a4SJacob Faibussowitsch break; 86077e54ba9SKris Buschelman case MAT_SYMMETRIC: 86177e54ba9SKris Buschelman case MAT_STRUCTURALLY_SYMMETRIC: 8629a4540c5SBarry Smith case MAT_HERMITIAN: 8639a4540c5SBarry Smith case MAT_SYMMETRY_ETERNAL: 864b94d7dedSBarry Smith case MAT_STRUCTURAL_SYMMETRY_ETERNAL: 865b94d7dedSBarry Smith case MAT_SPD: 866600fe468SBarry Smith case MAT_IGNORE_LOWER_TRIANGULAR: 8675d7aebe8SStefano Zampini case MAT_IGNORE_ZERO_ENTRIES: 868b94d7dedSBarry Smith case MAT_SPD_ETERNAL: 869b94d7dedSBarry Smith /* if the diagonal matrix is square it inherits some of the properties above */ 8709566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Option %s ignored\n", MatOptions[op])); 87177e54ba9SKris Buschelman break; 872d71ae5a4SJacob Faibussowitsch default: 873d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "unknown option %s", MatOptions[op]); 8743a40ed3dSBarry Smith } 8753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8768965ea79SLois Curfman McInnes } 8778965ea79SLois Curfman McInnes 87866976f2fSJacob Faibussowitsch static PetscErrorCode MatDiagonalScale_MPIDense(Mat A, Vec ll, Vec rr) 879d71ae5a4SJacob Faibussowitsch { 8805b2fa520SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 881637a0070SStefano Zampini const PetscScalar *l; 882637a0070SStefano Zampini PetscScalar x, *v, *vv, *r; 883637a0070SStefano Zampini PetscInt i, j, s2a, s3a, s2, s3, m = mdn->A->rmap->n, n = mdn->A->cmap->n, lda; 8845b2fa520SLois Curfman McInnes 8855b2fa520SLois Curfman McInnes PetscFunctionBegin; 8869566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(mdn->A, &vv)); 8879566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mdn->A, &lda)); 8889566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &s2, &s3)); 8895b2fa520SLois Curfman McInnes if (ll) { 8909566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(ll, &s2a)); 89108401ef6SPierre Jolivet PetscCheck(s2a == s2, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2); 8929566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(ll, &l)); 8935b2fa520SLois Curfman McInnes for (i = 0; i < m; i++) { 8945b2fa520SLois Curfman McInnes x = l[i]; 895637a0070SStefano Zampini v = vv + i; 8969371c9d4SSatish Balay for (j = 0; j < n; j++) { 8979371c9d4SSatish Balay (*v) *= x; 8989371c9d4SSatish Balay v += lda; 8999371c9d4SSatish Balay } 9005b2fa520SLois Curfman McInnes } 9019566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(ll, &l)); 9029566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 9035b2fa520SLois Curfman McInnes } 9045b2fa520SLois Curfman McInnes if (rr) { 905637a0070SStefano Zampini const PetscScalar *ar; 906637a0070SStefano Zampini 9079566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(rr, &s3a)); 90808401ef6SPierre Jolivet PetscCheck(s3a == s3, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3); 9099566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(rr, &ar)); 9106f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 9119566063dSJacob Faibussowitsch PetscCall(VecGetArray(mdn->lvec, &r)); 9129566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 9139566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 9149566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(rr, &ar)); 9155b2fa520SLois Curfman McInnes for (i = 0; i < n; i++) { 9165b2fa520SLois Curfman McInnes x = r[i]; 917637a0070SStefano Zampini v = vv + i * lda; 9182205254eSKarl Rupp for (j = 0; j < m; j++) (*v++) *= x; 9195b2fa520SLois Curfman McInnes } 9209566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(mdn->lvec, &r)); 9219566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 9225b2fa520SLois Curfman McInnes } 9239566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(mdn->A, &vv)); 9243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9255b2fa520SLois Curfman McInnes } 9265b2fa520SLois Curfman McInnes 92766976f2fSJacob Faibussowitsch static PetscErrorCode MatNorm_MPIDense(Mat A, NormType type, PetscReal *nrm) 928d71ae5a4SJacob Faibussowitsch { 9293501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 93013f74950SBarry Smith PetscInt i, j; 931616b8fbbSStefano Zampini PetscMPIInt size; 932329f5518SBarry Smith PetscReal sum = 0.0; 933637a0070SStefano Zampini const PetscScalar *av, *v; 9343501a2bdSLois Curfman McInnes 9353a40ed3dSBarry Smith PetscFunctionBegin; 9369566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, &av)); 937637a0070SStefano Zampini v = av; 9389566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 939616b8fbbSStefano Zampini if (size == 1) { 9409566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, nrm)); 9413501a2bdSLois Curfman McInnes } else { 9423501a2bdSLois Curfman McInnes if (type == NORM_FROBENIUS) { 943d0f46423SBarry Smith for (i = 0; i < mdn->A->cmap->n * mdn->A->rmap->n; i++) { 9449371c9d4SSatish Balay sum += PetscRealPart(PetscConj(*v) * (*v)); 9459371c9d4SSatish Balay v++; 9463501a2bdSLois Curfman McInnes } 9471c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&sum, nrm, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 9488f1a2a5eSBarry Smith *nrm = PetscSqrtReal(*nrm); 9499566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * mdn->A->cmap->n * mdn->A->rmap->n)); 9503a40ed3dSBarry Smith } else if (type == NORM_1) { 951329f5518SBarry Smith PetscReal *tmp, *tmp2; 9529566063dSJacob Faibussowitsch PetscCall(PetscCalloc2(A->cmap->N, &tmp, A->cmap->N, &tmp2)); 953064f8208SBarry Smith *nrm = 0.0; 954637a0070SStefano Zampini v = av; 955d0f46423SBarry Smith for (j = 0; j < mdn->A->cmap->n; j++) { 956d0f46423SBarry Smith for (i = 0; i < mdn->A->rmap->n; i++) { 9579371c9d4SSatish Balay tmp[j] += PetscAbsScalar(*v); 9589371c9d4SSatish Balay v++; 9593501a2bdSLois Curfman McInnes } 9603501a2bdSLois Curfman McInnes } 9611c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(tmp, tmp2, A->cmap->N, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 962d0f46423SBarry Smith for (j = 0; j < A->cmap->N; j++) { 963064f8208SBarry Smith if (tmp2[j] > *nrm) *nrm = tmp2[j]; 9643501a2bdSLois Curfman McInnes } 9659566063dSJacob Faibussowitsch PetscCall(PetscFree2(tmp, tmp2)); 9669566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(A->cmap->n * A->rmap->n)); 9673a40ed3dSBarry Smith } else if (type == NORM_INFINITY) { /* max row norm */ 968329f5518SBarry Smith PetscReal ntemp; 9699566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, &ntemp)); 9701c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&ntemp, nrm, 1, MPIU_REAL, MPIU_MAX, PetscObjectComm((PetscObject)A))); 971ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for two norm"); 9723501a2bdSLois Curfman McInnes } 9739566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, &av)); 9743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9753501a2bdSLois Curfman McInnes } 9763501a2bdSLois Curfman McInnes 97766976f2fSJacob Faibussowitsch static PetscErrorCode MatTranspose_MPIDense(Mat A, MatReuse reuse, Mat *matout) 978d71ae5a4SJacob Faibussowitsch { 9793501a2bdSLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 9803501a2bdSLois Curfman McInnes Mat B; 981d0f46423SBarry Smith PetscInt M = A->rmap->N, N = A->cmap->N, m, n, *rwork, rstart = A->rmap->rstart; 982637a0070SStefano Zampini PetscInt j, i, lda; 98387828ca2SBarry Smith PetscScalar *v; 9843501a2bdSLois Curfman McInnes 9853a40ed3dSBarry Smith PetscFunctionBegin; 9867fb60732SBarry Smith if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *matout)); 987cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { 9889566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 9899566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->cmap->n, A->rmap->n, N, M)); 9909566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)A)->type_name)); 9919566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(B, NULL)); 992637a0070SStefano Zampini } else B = *matout; 9933501a2bdSLois Curfman McInnes 9949371c9d4SSatish Balay m = a->A->rmap->n; 9959371c9d4SSatish Balay n = a->A->cmap->n; 9969566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)&v)); 9979566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 9989566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &rwork)); 9993501a2bdSLois Curfman McInnes for (i = 0; i < m; i++) rwork[i] = rstart + i; 10001acff37aSSatish Balay for (j = 0; j < n; j++) { 10019566063dSJacob Faibussowitsch PetscCall(MatSetValues(B, 1, &j, m, rwork, v, INSERT_VALUES)); 10028e3a54c0SPierre Jolivet v = PetscSafePointerPlusOffset(v, lda); 10033501a2bdSLois Curfman McInnes } 10049566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)&v)); 10059566063dSJacob Faibussowitsch PetscCall(PetscFree(rwork)); 10069566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 10079566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 1008cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) { 10093501a2bdSLois Curfman McInnes *matout = B; 10103501a2bdSLois Curfman McInnes } else { 10119566063dSJacob Faibussowitsch PetscCall(MatHeaderMerge(A, &B)); 10123501a2bdSLois Curfman McInnes } 10133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1014096963f5SLois Curfman McInnes } 1015096963f5SLois Curfman McInnes 10166849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat, MatDuplicateOption, Mat *); 101752c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat, PetscScalar); 10188965ea79SLois Curfman McInnes 101966976f2fSJacob Faibussowitsch static PetscErrorCode MatSetUp_MPIDense(Mat A) 1020d71ae5a4SJacob Faibussowitsch { 1021273d9f13SBarry Smith PetscFunctionBegin; 10229566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 10239566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 102448a46eb9SPierre Jolivet if (!A->preallocated) PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 10253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1026273d9f13SBarry Smith } 1027273d9f13SBarry Smith 102866976f2fSJacob Faibussowitsch static PetscErrorCode MatAXPY_MPIDense(Mat Y, PetscScalar alpha, Mat X, MatStructure str) 1029d71ae5a4SJacob Faibussowitsch { 1030488007eeSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)Y->data, *B = (Mat_MPIDense *)X->data; 1031488007eeSBarry Smith 1032488007eeSBarry Smith PetscFunctionBegin; 10339566063dSJacob Faibussowitsch PetscCall(MatAXPY(A->A, alpha, B->A, str)); 10343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1035488007eeSBarry Smith } 1036488007eeSBarry Smith 103766976f2fSJacob Faibussowitsch static PetscErrorCode MatConjugate_MPIDense(Mat mat) 1038d71ae5a4SJacob Faibussowitsch { 1039ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 1040ba337c44SJed Brown 1041ba337c44SJed Brown PetscFunctionBegin; 10429566063dSJacob Faibussowitsch PetscCall(MatConjugate(a->A)); 10433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1044ba337c44SJed Brown } 1045ba337c44SJed Brown 104666976f2fSJacob Faibussowitsch static PetscErrorCode MatRealPart_MPIDense(Mat A) 1047d71ae5a4SJacob Faibussowitsch { 1048ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1049ba337c44SJed Brown 1050ba337c44SJed Brown PetscFunctionBegin; 10519566063dSJacob Faibussowitsch PetscCall(MatRealPart(a->A)); 10523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1053ba337c44SJed Brown } 1054ba337c44SJed Brown 105566976f2fSJacob Faibussowitsch static PetscErrorCode MatImaginaryPart_MPIDense(Mat A) 1056d71ae5a4SJacob Faibussowitsch { 1057ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1058ba337c44SJed Brown 1059ba337c44SJed Brown PetscFunctionBegin; 10609566063dSJacob Faibussowitsch PetscCall(MatImaginaryPart(a->A)); 10613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1062ba337c44SJed Brown } 1063ba337c44SJed Brown 1064d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetColumnVector_MPIDense(Mat A, Vec v, PetscInt col) 1065d71ae5a4SJacob Faibussowitsch { 1066637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 106749a6ff4bSBarry Smith 106849a6ff4bSBarry Smith PetscFunctionBegin; 106928b400f6SJacob Faibussowitsch PetscCheck(a->A, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing local matrix"); 107028b400f6SJacob Faibussowitsch PetscCheck(a->A->ops->getcolumnvector, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing get column operation"); 10719566063dSJacob Faibussowitsch PetscCall((*a->A->ops->getcolumnvector)(a->A, v, col)); 10723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 107349a6ff4bSBarry Smith } 107449a6ff4bSBarry Smith 1075857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat, PetscInt, PetscReal *); 107652c5f739Sprj- 107766976f2fSJacob Faibussowitsch static PetscErrorCode MatGetColumnReductions_MPIDense(Mat A, PetscInt type, PetscReal *reductions) 1078d71ae5a4SJacob Faibussowitsch { 1079a873a8cdSSam Reynolds PetscInt i, m, n; 10800716a85fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10810716a85fSBarry Smith PetscReal *work; 10820716a85fSBarry Smith 10830716a85fSBarry Smith PetscFunctionBegin; 10849566063dSJacob Faibussowitsch PetscCall(MatGetSize(A, &m, &n)); 10859566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &work)); 1086857cbf51SRichard Tran Mills if (type == REDUCTION_MEAN_REALPART) { 10879566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_REALPART, work)); 1088857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_IMAGINARYPART) { 10899566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_IMAGINARYPART, work)); 1090a873a8cdSSam Reynolds } else { 10919566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, type, work)); 1092a873a8cdSSam Reynolds } 1093857cbf51SRichard Tran Mills if (type == NORM_2) { 10940716a85fSBarry Smith for (i = 0; i < n; i++) work[i] *= work[i]; 10950716a85fSBarry Smith } 1096857cbf51SRichard Tran Mills if (type == NORM_INFINITY) { 10971c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(work, reductions, n, MPIU_REAL, MPIU_MAX, A->hdr.comm)); 10980716a85fSBarry Smith } else { 10991c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(work, reductions, n, MPIU_REAL, MPIU_SUM, A->hdr.comm)); 11000716a85fSBarry Smith } 11019566063dSJacob Faibussowitsch PetscCall(PetscFree(work)); 1102857cbf51SRichard Tran Mills if (type == NORM_2) { 1103a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] = PetscSqrtReal(reductions[i]); 1104857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) { 1105a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] /= m; 11060716a85fSBarry Smith } 11073ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 11080716a85fSBarry Smith } 11090716a85fSBarry Smith 1110d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetRandom_MPIDense(Mat x, PetscRandom rctx) 1111d71ae5a4SJacob Faibussowitsch { 111273a71a0fSBarry Smith Mat_MPIDense *d = (Mat_MPIDense *)x->data; 111373a71a0fSBarry Smith 111473a71a0fSBarry Smith PetscFunctionBegin; 11159566063dSJacob Faibussowitsch PetscCall(MatSetRandom(d->A, rctx)); 11163faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 11173faff063SStefano Zampini x->offloadmask = d->A->offloadmask; 11183faff063SStefano Zampini #endif 11193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 112073a71a0fSBarry Smith } 112173a71a0fSBarry Smith 1122d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A, PetscBool *missing, PetscInt *d) 1123d71ae5a4SJacob Faibussowitsch { 11243b49f96aSBarry Smith PetscFunctionBegin; 11253b49f96aSBarry Smith *missing = PETSC_FALSE; 11263ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 11273b49f96aSBarry Smith } 11283b49f96aSBarry Smith 11294222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1130cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 11316718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1132a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 11336718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat, Mat, PetscBool *); 11346718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat, PetscViewer); 11355d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat); 1136cc48ffa7SToby Isaac 113709dc0095SBarry Smith static struct _MatOps MatOps_Values = {MatSetValues_MPIDense, 113809dc0095SBarry Smith MatGetRow_MPIDense, 113909dc0095SBarry Smith MatRestoreRow_MPIDense, 114009dc0095SBarry Smith MatMult_MPIDense, 114197304618SKris Buschelman /* 4*/ MatMultAdd_MPIDense, 11427c922b88SBarry Smith MatMultTranspose_MPIDense, 11437c922b88SBarry Smith MatMultTransposeAdd_MPIDense, 1144f4259b30SLisandro Dalcin NULL, 1145f4259b30SLisandro Dalcin NULL, 1146f4259b30SLisandro Dalcin NULL, 1147f4259b30SLisandro Dalcin /* 10*/ NULL, 1148f4259b30SLisandro Dalcin NULL, 1149f4259b30SLisandro Dalcin NULL, 1150f4259b30SLisandro Dalcin NULL, 115109dc0095SBarry Smith MatTranspose_MPIDense, 115297304618SKris Buschelman /* 15*/ MatGetInfo_MPIDense, 11536e4ee0c6SHong Zhang MatEqual_MPIDense, 115409dc0095SBarry Smith MatGetDiagonal_MPIDense, 11555b2fa520SLois Curfman McInnes MatDiagonalScale_MPIDense, 115609dc0095SBarry Smith MatNorm_MPIDense, 115797304618SKris Buschelman /* 20*/ MatAssemblyBegin_MPIDense, 115809dc0095SBarry Smith MatAssemblyEnd_MPIDense, 115909dc0095SBarry Smith MatSetOption_MPIDense, 116009dc0095SBarry Smith MatZeroEntries_MPIDense, 1161d519adbfSMatthew Knepley /* 24*/ MatZeroRows_MPIDense, 1162f4259b30SLisandro Dalcin NULL, 1163f4259b30SLisandro Dalcin NULL, 1164f4259b30SLisandro Dalcin NULL, 1165f4259b30SLisandro Dalcin NULL, 11664994cf47SJed Brown /* 29*/ MatSetUp_MPIDense, 1167f4259b30SLisandro Dalcin NULL, 1168f4259b30SLisandro Dalcin NULL, 1169c56a70eeSBarry Smith MatGetDiagonalBlock_MPIDense, 1170f4259b30SLisandro Dalcin NULL, 1171d519adbfSMatthew Knepley /* 34*/ MatDuplicate_MPIDense, 1172f4259b30SLisandro Dalcin NULL, 1173f4259b30SLisandro Dalcin NULL, 1174f4259b30SLisandro Dalcin NULL, 1175f4259b30SLisandro Dalcin NULL, 1176d519adbfSMatthew Knepley /* 39*/ MatAXPY_MPIDense, 11777dae84e0SHong Zhang MatCreateSubMatrices_MPIDense, 1178f4259b30SLisandro Dalcin NULL, 117909dc0095SBarry Smith MatGetValues_MPIDense, 1180a76f77c3SStefano Zampini MatCopy_MPIDense, 1181f4259b30SLisandro Dalcin /* 44*/ NULL, 118209dc0095SBarry Smith MatScale_MPIDense, 11832f605a99SJose E. Roman MatShift_MPIDense, 1184f4259b30SLisandro Dalcin NULL, 1185f4259b30SLisandro Dalcin NULL, 118673a71a0fSBarry Smith /* 49*/ MatSetRandom_MPIDense, 1187f4259b30SLisandro Dalcin NULL, 1188f4259b30SLisandro Dalcin NULL, 1189f4259b30SLisandro Dalcin NULL, 1190f4259b30SLisandro Dalcin NULL, 1191f4259b30SLisandro Dalcin /* 54*/ NULL, 1192f4259b30SLisandro Dalcin NULL, 1193f4259b30SLisandro Dalcin NULL, 1194f4259b30SLisandro Dalcin NULL, 1195f4259b30SLisandro Dalcin NULL, 11967dae84e0SHong Zhang /* 59*/ MatCreateSubMatrix_MPIDense, 1197b9b97703SBarry Smith MatDestroy_MPIDense, 1198b9b97703SBarry Smith MatView_MPIDense, 1199f4259b30SLisandro Dalcin NULL, 1200f4259b30SLisandro Dalcin NULL, 1201f4259b30SLisandro Dalcin /* 64*/ NULL, 1202f4259b30SLisandro Dalcin NULL, 1203f4259b30SLisandro Dalcin NULL, 1204f4259b30SLisandro Dalcin NULL, 1205f4259b30SLisandro Dalcin NULL, 1206f4259b30SLisandro Dalcin /* 69*/ NULL, 1207f4259b30SLisandro Dalcin NULL, 1208f4259b30SLisandro Dalcin NULL, 1209f4259b30SLisandro Dalcin NULL, 1210f4259b30SLisandro Dalcin NULL, 1211f4259b30SLisandro Dalcin /* 74*/ NULL, 1212f4259b30SLisandro Dalcin NULL, 1213f4259b30SLisandro Dalcin NULL, 1214f4259b30SLisandro Dalcin NULL, 1215f4259b30SLisandro Dalcin NULL, 1216f4259b30SLisandro Dalcin /* 79*/ NULL, 1217f4259b30SLisandro Dalcin NULL, 1218f4259b30SLisandro Dalcin NULL, 1219f4259b30SLisandro Dalcin NULL, 12205bba2384SShri Abhyankar /* 83*/ MatLoad_MPIDense, 1221f4259b30SLisandro Dalcin NULL, 1222f4259b30SLisandro Dalcin NULL, 1223f4259b30SLisandro Dalcin NULL, 1224f4259b30SLisandro Dalcin NULL, 1225f4259b30SLisandro Dalcin NULL, 1226f4259b30SLisandro Dalcin /* 89*/ NULL, 1227f4259b30SLisandro Dalcin NULL, 1228f4259b30SLisandro Dalcin NULL, 1229f4259b30SLisandro Dalcin NULL, 1230f4259b30SLisandro Dalcin NULL, 1231f4259b30SLisandro Dalcin /* 94*/ NULL, 1232f4259b30SLisandro Dalcin NULL, 12336718818eSStefano Zampini MatMatTransposeMultSymbolic_MPIDense_MPIDense, 1234cc48ffa7SToby Isaac MatMatTransposeMultNumeric_MPIDense_MPIDense, 1235f4259b30SLisandro Dalcin NULL, 12364222ddf1SHong Zhang /* 99*/ MatProductSetFromOptions_MPIDense, 1237f4259b30SLisandro Dalcin NULL, 1238f4259b30SLisandro Dalcin NULL, 1239ba337c44SJed Brown MatConjugate_MPIDense, 1240f4259b30SLisandro Dalcin NULL, 1241f4259b30SLisandro Dalcin /*104*/ NULL, 1242ba337c44SJed Brown MatRealPart_MPIDense, 1243ba337c44SJed Brown MatImaginaryPart_MPIDense, 1244f4259b30SLisandro Dalcin NULL, 1245f4259b30SLisandro Dalcin NULL, 1246f4259b30SLisandro Dalcin /*109*/ NULL, 1247f4259b30SLisandro Dalcin NULL, 1248f4259b30SLisandro Dalcin NULL, 124949a6ff4bSBarry Smith MatGetColumnVector_MPIDense, 12503b49f96aSBarry Smith MatMissingDiagonal_MPIDense, 1251f4259b30SLisandro Dalcin /*114*/ NULL, 1252f4259b30SLisandro Dalcin NULL, 1253f4259b30SLisandro Dalcin NULL, 1254f4259b30SLisandro Dalcin NULL, 1255f4259b30SLisandro Dalcin NULL, 1256f4259b30SLisandro Dalcin /*119*/ NULL, 1257f4259b30SLisandro Dalcin NULL, 1258*459e8d23SBlanca Mellado Pinto MatMultHermitianTranspose_MPIDense, 1259*459e8d23SBlanca Mellado Pinto MatMultHermitianTransposeAdd_MPIDense, 1260f4259b30SLisandro Dalcin NULL, 1261f4259b30SLisandro Dalcin /*124*/ NULL, 1262a873a8cdSSam Reynolds MatGetColumnReductions_MPIDense, 1263f4259b30SLisandro Dalcin NULL, 1264f4259b30SLisandro Dalcin NULL, 1265f4259b30SLisandro Dalcin NULL, 1266f4259b30SLisandro Dalcin /*129*/ NULL, 1267f4259b30SLisandro Dalcin NULL, 12686718818eSStefano Zampini MatTransposeMatMultSymbolic_MPIDense_MPIDense, 1269cb20be35SHong Zhang MatTransposeMatMultNumeric_MPIDense_MPIDense, 1270f4259b30SLisandro Dalcin NULL, 1271f4259b30SLisandro Dalcin /*134*/ NULL, 1272f4259b30SLisandro Dalcin NULL, 1273f4259b30SLisandro Dalcin NULL, 1274f4259b30SLisandro Dalcin NULL, 1275f4259b30SLisandro Dalcin NULL, 1276f4259b30SLisandro Dalcin /*139*/ NULL, 1277f4259b30SLisandro Dalcin NULL, 1278f4259b30SLisandro Dalcin NULL, 1279f4259b30SLisandro Dalcin NULL, 1280f4259b30SLisandro Dalcin NULL, 12814222ddf1SHong Zhang MatCreateMPIMatConcatenateSeqMat_MPIDense, 1282f4259b30SLisandro Dalcin /*145*/ NULL, 1283f4259b30SLisandro Dalcin NULL, 128499a7f59eSMark Adams NULL, 128599a7f59eSMark Adams NULL, 12867fb60732SBarry Smith NULL, 1287dec0b466SHong Zhang /*150*/ NULL, 1288dec0b466SHong Zhang NULL}; 12898965ea79SLois Curfman McInnes 129066976f2fSJacob Faibussowitsch static PetscErrorCode MatMPIDenseSetPreallocation_MPIDense(Mat mat, PetscScalar *data) 1291d71ae5a4SJacob Faibussowitsch { 1292637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 129347d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 1294a23d5eceSKris Buschelman 1295a23d5eceSKris Buschelman PetscFunctionBegin; 129628b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 12979566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->rmap)); 12989566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->cmap)); 1299637a0070SStefano Zampini if (!a->A) { 13009566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 13019566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, mat->rmap->n, mat->cmap->N, mat->rmap->n, mat->cmap->N)); 1302637a0070SStefano Zampini } 130347d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 130447d993e7Ssuyashtn PetscBool iscuda; 13059566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSECUDA, &iscuda)); 130647d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 130747d993e7Ssuyashtn #endif 130847d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 130947d993e7Ssuyashtn PetscBool iship; 131047d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSEHIP, &iship)); 131147d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 131247d993e7Ssuyashtn #endif 131347d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 13149566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(a->A, data)); 131547d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 13163faff063SStefano Zampini mat->offloadmask = a->A->offloadmask; 13173faff063SStefano Zampini #endif 1318637a0070SStefano Zampini mat->preallocated = PETSC_TRUE; 13196f08ad05SPierre Jolivet mat->assembled = PETSC_TRUE; 13203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1321a23d5eceSKris Buschelman } 1322a23d5eceSKris Buschelman 1323d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1324d71ae5a4SJacob Faibussowitsch { 13254e29119aSPierre Jolivet Mat B, C; 13264e29119aSPierre Jolivet 13274e29119aSPierre Jolivet PetscFunctionBegin; 13289566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMat(A, MAT_INITIAL_MATRIX, &C)); 13299566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqDense(C, MATSEQDENSE, MAT_INITIAL_MATRIX, &B)); 13309566063dSJacob Faibussowitsch PetscCall(MatDestroy(&C)); 13314e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 13324e29119aSPierre Jolivet C = *newmat; 13334e29119aSPierre Jolivet } else C = NULL; 13349566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 13359566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 13364e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 13379566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 13384e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 13393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 13404e29119aSPierre Jolivet } 13414e29119aSPierre Jolivet 134266976f2fSJacob Faibussowitsch static PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1343d71ae5a4SJacob Faibussowitsch { 13444e29119aSPierre Jolivet Mat B, C; 13454e29119aSPierre Jolivet 13464e29119aSPierre Jolivet PetscFunctionBegin; 13479566063dSJacob Faibussowitsch PetscCall(MatDenseGetLocalMatrix(A, &C)); 13489566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqDense_SeqAIJ(C, MATSEQAIJ, MAT_INITIAL_MATRIX, &B)); 13494e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 13504e29119aSPierre Jolivet C = *newmat; 13514e29119aSPierre Jolivet } else C = NULL; 13529566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 13539566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 13544e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 13559566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 13564e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 13573ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 13584e29119aSPierre Jolivet } 13594e29119aSPierre Jolivet 136065b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 1361d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1362d71ae5a4SJacob Faibussowitsch { 1363f709e8d7SPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 13648ea901baSHong Zhang Mat mat_elemental; 136532d7a744SHong Zhang PetscScalar *v; 1366f709e8d7SPierre Jolivet PetscInt m = A->rmap->n, N = A->cmap->N, rstart = A->rmap->rstart, i, *rows, *cols, lda; 13678ea901baSHong Zhang 13688baccfbdSHong Zhang PetscFunctionBegin; 1369378336b6SHong Zhang if (reuse == MAT_REUSE_MATRIX) { 1370378336b6SHong Zhang mat_elemental = *newmat; 13719566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(*newmat)); 1372378336b6SHong Zhang } else { 13739566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental)); 13749566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat_elemental, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 13759566063dSJacob Faibussowitsch PetscCall(MatSetType(mat_elemental, MATELEMENTAL)); 13769566063dSJacob Faibussowitsch PetscCall(MatSetUp(mat_elemental)); 13779566063dSJacob Faibussowitsch PetscCall(MatSetOption(mat_elemental, MAT_ROW_ORIENTED, PETSC_FALSE)); 1378378336b6SHong Zhang } 1379378336b6SHong Zhang 13809566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &rows, N, &cols)); 138132d7a744SHong Zhang for (i = 0; i < N; i++) cols[i] = i; 138232d7a744SHong Zhang for (i = 0; i < m; i++) rows[i] = rstart + i; 13838ea901baSHong Zhang 1384637a0070SStefano Zampini /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */ 13859566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(A, &v)); 1386f709e8d7SPierre Jolivet PetscCall(MatDenseGetLDA(a->A, &lda)); 1387f709e8d7SPierre Jolivet if (lda == m) PetscCall(MatSetValues(mat_elemental, m, rows, N, cols, v, ADD_VALUES)); 1388f709e8d7SPierre Jolivet else { 1389f709e8d7SPierre Jolivet for (i = 0; i < N; i++) PetscCall(MatSetValues(mat_elemental, m, rows, 1, &i, v + lda * i, ADD_VALUES)); 1390f709e8d7SPierre Jolivet } 13919566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY)); 13929566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY)); 13939566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(A, &v)); 13949566063dSJacob Faibussowitsch PetscCall(PetscFree2(rows, cols)); 13958ea901baSHong Zhang 1396511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 13979566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &mat_elemental)); 13988ea901baSHong Zhang } else { 13998ea901baSHong Zhang *newmat = mat_elemental; 14008ea901baSHong Zhang } 14013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14028baccfbdSHong Zhang } 140365b80a83SHong Zhang #endif 14048baccfbdSHong Zhang 1405d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A, PetscInt col, PetscScalar **vals) 1406d71ae5a4SJacob Faibussowitsch { 140786aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 140886aefd0dSHong Zhang 140986aefd0dSHong Zhang PetscFunctionBegin; 14109566063dSJacob Faibussowitsch PetscCall(MatDenseGetColumn(mat->A, col, vals)); 14113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 141286aefd0dSHong Zhang } 141386aefd0dSHong Zhang 1414d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A, PetscScalar **vals) 1415d71ae5a4SJacob Faibussowitsch { 141686aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 141786aefd0dSHong Zhang 141886aefd0dSHong Zhang PetscFunctionBegin; 14199566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreColumn(mat->A, vals)); 14203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 142186aefd0dSHong Zhang } 142286aefd0dSHong Zhang 1423d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm, Mat inmat, PetscInt n, MatReuse scall, Mat *outmat) 1424d71ae5a4SJacob Faibussowitsch { 142594e2cb23SJakub Kruzik Mat_MPIDense *mat; 142694e2cb23SJakub Kruzik PetscInt m, nloc, N; 142794e2cb23SJakub Kruzik 142894e2cb23SJakub Kruzik PetscFunctionBegin; 14299566063dSJacob Faibussowitsch PetscCall(MatGetSize(inmat, &m, &N)); 14309566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(inmat, NULL, &nloc)); 143194e2cb23SJakub Kruzik if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */ 143294e2cb23SJakub Kruzik PetscInt sum; 143394e2cb23SJakub Kruzik 143448a46eb9SPierre Jolivet if (n == PETSC_DECIDE) PetscCall(PetscSplitOwnership(comm, &n, &N)); 143594e2cb23SJakub Kruzik /* Check sum(n) = N */ 14361c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&n, &sum, 1, MPIU_INT, MPI_SUM, comm)); 143708401ef6SPierre Jolivet PetscCheck(sum == N, PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT, sum, N); 143894e2cb23SJakub Kruzik 14399566063dSJacob Faibussowitsch PetscCall(MatCreateDense(comm, m, n, PETSC_DETERMINE, N, NULL, outmat)); 14409566063dSJacob Faibussowitsch PetscCall(MatSetOption(*outmat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 144194e2cb23SJakub Kruzik } 144294e2cb23SJakub Kruzik 144394e2cb23SJakub Kruzik /* numeric phase */ 144494e2cb23SJakub Kruzik mat = (Mat_MPIDense *)(*outmat)->data; 14459566063dSJacob Faibussowitsch PetscCall(MatCopy(inmat, mat->A, SAME_NONZERO_PATTERN)); 14463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 144794e2cb23SJakub Kruzik } 144894e2cb23SJakub Kruzik 1449d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1450d71ae5a4SJacob Faibussowitsch { 14516947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14526947451fSStefano Zampini PetscInt lda; 14536947451fSStefano Zampini 14546947451fSStefano Zampini PetscFunctionBegin; 145528b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 145628b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1457d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 14586947451fSStefano Zampini a->vecinuse = col + 1; 14599566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 14609566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, (PetscScalar **)&a->ptrinuse)); 14618e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 14626947451fSStefano Zampini *v = a->cvec; 14633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14646947451fSStefano Zampini } 14656947451fSStefano Zampini 1466d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1467d71ae5a4SJacob Faibussowitsch { 14686947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14696947451fSStefano Zampini 14706947451fSStefano Zampini PetscFunctionBegin; 147128b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 147228b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector"); 14736947451fSStefano Zampini a->vecinuse = 0; 14749566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, (PetscScalar **)&a->ptrinuse)); 14759566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1476742765d3SMatthew Knepley if (v) *v = NULL; 14773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14786947451fSStefano Zampini } 14796947451fSStefano Zampini 1480d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1481d71ae5a4SJacob Faibussowitsch { 14826947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14836947451fSStefano Zampini PetscInt lda; 14846947451fSStefano Zampini 14856947451fSStefano Zampini PetscFunctionBegin; 148628b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 148728b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1488d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 14896947451fSStefano Zampini a->vecinuse = col + 1; 14909566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 14919566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &a->ptrinuse)); 14928e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 14939566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(a->cvec)); 14946947451fSStefano Zampini *v = a->cvec; 14953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14966947451fSStefano Zampini } 14976947451fSStefano Zampini 1498d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1499d71ae5a4SJacob Faibussowitsch { 15006947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15016947451fSStefano Zampini 15026947451fSStefano Zampini PetscFunctionBegin; 15035f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 15045f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 15056947451fSStefano Zampini a->vecinuse = 0; 15069566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &a->ptrinuse)); 15079566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(a->cvec)); 15089566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1509742765d3SMatthew Knepley if (v) *v = NULL; 15103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15116947451fSStefano Zampini } 15126947451fSStefano Zampini 1513d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1514d71ae5a4SJacob Faibussowitsch { 15156947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15166947451fSStefano Zampini PetscInt lda; 15176947451fSStefano Zampini 15186947451fSStefano Zampini PetscFunctionBegin; 15195f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 15205f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1521d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 15226947451fSStefano Zampini a->vecinuse = col + 1; 15239566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 15249566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 15258e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 15266947451fSStefano Zampini *v = a->cvec; 15273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15286947451fSStefano Zampini } 15296947451fSStefano Zampini 1530d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1531d71ae5a4SJacob Faibussowitsch { 15326947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15336947451fSStefano Zampini 15346947451fSStefano Zampini PetscFunctionBegin; 15355f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 15365f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 15376947451fSStefano Zampini a->vecinuse = 0; 15389566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 15399566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1540742765d3SMatthew Knepley if (v) *v = NULL; 15413ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15426947451fSStefano Zampini } 15436947451fSStefano Zampini 154466976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A, PetscInt rbegin, PetscInt rend, PetscInt cbegin, PetscInt cend, Mat *v) 1545d71ae5a4SJacob Faibussowitsch { 15465ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1547616b8fbbSStefano Zampini Mat_MPIDense *c; 1548616b8fbbSStefano Zampini MPI_Comm comm; 1549a2748737SPierre Jolivet PetscInt pbegin, pend; 15505ea7661aSPierre Jolivet 15515ea7661aSPierre Jolivet PetscFunctionBegin; 15529566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 15535f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 15545f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1555a2748737SPierre Jolivet pbegin = PetscMax(0, PetscMin(A->rmap->rend, rbegin) - A->rmap->rstart); 1556a2748737SPierre Jolivet pend = PetscMin(A->rmap->n, PetscMax(0, rend - A->rmap->rstart)); 15575ea7661aSPierre Jolivet if (!a->cmat) { 15589566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &a->cmat)); 15599566063dSJacob Faibussowitsch PetscCall(MatSetType(a->cmat, ((PetscObject)A)->type_name)); 1560a2748737SPierre Jolivet if (rend - rbegin == A->rmap->N) PetscCall(PetscLayoutReference(A->rmap, &a->cmat->rmap)); 1561a2748737SPierre Jolivet else { 1562a2748737SPierre Jolivet PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, pend - pbegin)); 1563a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1564a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1565a2748737SPierre Jolivet } 15669566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 15679566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1568a2748737SPierre Jolivet } else { 1569a2748737SPierre Jolivet PetscBool same = (PetscBool)(rend - rbegin == a->cmat->rmap->N); 1570a2748737SPierre Jolivet if (same && a->cmat->rmap->N != A->rmap->N) { 1571a2748737SPierre Jolivet same = (PetscBool)(pend - pbegin == a->cmat->rmap->n); 1572a2748737SPierre Jolivet PetscCall(MPIU_Allreduce(MPI_IN_PLACE, &same, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 1573a2748737SPierre Jolivet } 1574a2748737SPierre Jolivet if (!same) { 1575a2748737SPierre Jolivet PetscCall(PetscLayoutDestroy(&a->cmat->rmap)); 1576a2748737SPierre Jolivet PetscCall(PetscLayoutCreate(comm, &a->cmat->rmap)); 1577a2748737SPierre Jolivet PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, pend - pbegin)); 1578a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1579a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1580a2748737SPierre Jolivet } 1581a2748737SPierre Jolivet if (cend - cbegin != a->cmat->cmap->N) { 15829566063dSJacob Faibussowitsch PetscCall(PetscLayoutDestroy(&a->cmat->cmap)); 15839566063dSJacob Faibussowitsch PetscCall(PetscLayoutCreate(comm, &a->cmat->cmap)); 15849566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 15859566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 15865ea7661aSPierre Jolivet } 1587a2748737SPierre Jolivet } 1588616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 15895f80ce2aSJacob Faibussowitsch PetscCheck(!c->A, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1590a2748737SPierre Jolivet PetscCall(MatDenseGetSubMatrix(a->A, pbegin, pend, cbegin, cend, &c->A)); 15913faff063SStefano Zampini 1592616b8fbbSStefano Zampini a->cmat->preallocated = PETSC_TRUE; 1593616b8fbbSStefano Zampini a->cmat->assembled = PETSC_TRUE; 15943faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 15953faff063SStefano Zampini a->cmat->offloadmask = c->A->offloadmask; 15963faff063SStefano Zampini #endif 15975ea7661aSPierre Jolivet a->matinuse = cbegin + 1; 15985ea7661aSPierre Jolivet *v = a->cmat; 15993ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16005ea7661aSPierre Jolivet } 16015ea7661aSPierre Jolivet 160266976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A, Mat *v) 1603d71ae5a4SJacob Faibussowitsch { 16045ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1605616b8fbbSStefano Zampini Mat_MPIDense *c; 16065ea7661aSPierre Jolivet 16075ea7661aSPierre Jolivet PetscFunctionBegin; 16085f80ce2aSJacob Faibussowitsch PetscCheck(a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetSubMatrix() first"); 16095f80ce2aSJacob Faibussowitsch PetscCheck(a->cmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal matrix"); 16105f80ce2aSJacob Faibussowitsch PetscCheck(*v == a->cmat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Not the matrix obtained from MatDenseGetSubMatrix()"); 16115ea7661aSPierre Jolivet a->matinuse = 0; 1612616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 16139566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreSubMatrix(a->A, &c->A)); 1614742765d3SMatthew Knepley if (v) *v = NULL; 16153faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 16163faff063SStefano Zampini A->offloadmask = a->A->offloadmask; 16173faff063SStefano Zampini #endif 16183ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16195ea7661aSPierre Jolivet } 16205ea7661aSPierre Jolivet 1621002bc6daSRichard Tran Mills /*MC 1622002bc6daSRichard Tran Mills MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices. 1623002bc6daSRichard Tran Mills 16242ef1f0ffSBarry Smith Options Database Key: 162511a5261eSBarry Smith . -mat_type mpidense - sets the matrix type to `MATMPIDENSE` during a call to `MatSetFromOptions()` 1626002bc6daSRichard Tran Mills 1627002bc6daSRichard Tran Mills Level: beginner 1628002bc6daSRichard Tran Mills 16291cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreateDense()`, `MATSEQDENSE`, `MATDENSE` 1630002bc6daSRichard Tran Mills M*/ 16314742e46bSJacob Faibussowitsch PetscErrorCode MatCreate_MPIDense(Mat mat) 1632d71ae5a4SJacob Faibussowitsch { 1633273d9f13SBarry Smith Mat_MPIDense *a; 1634273d9f13SBarry Smith 1635273d9f13SBarry Smith PetscFunctionBegin; 16364dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&a)); 1637b0a32e0cSBarry Smith mat->data = (void *)a; 1638aea10558SJacob Faibussowitsch mat->ops[0] = MatOps_Values; 1639273d9f13SBarry Smith 1640273d9f13SBarry Smith mat->insertmode = NOT_SET_VALUES; 1641273d9f13SBarry Smith 1642273d9f13SBarry Smith /* build cache for off array entries formed */ 1643273d9f13SBarry Smith a->donotstash = PETSC_FALSE; 16442205254eSKarl Rupp 16459566063dSJacob Faibussowitsch PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat), 1, &mat->stash)); 1646273d9f13SBarry Smith 1647273d9f13SBarry Smith /* stuff used for matrix vector multiply */ 1648f4259b30SLisandro Dalcin a->lvec = NULL; 1649f4259b30SLisandro Dalcin a->Mvctx = NULL; 1650273d9f13SBarry Smith a->roworiented = PETSC_TRUE; 1651273d9f13SBarry Smith 16529566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", MatDenseGetLDA_MPIDense)); 16539566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", MatDenseSetLDA_MPIDense)); 16549566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", MatDenseGetArray_MPIDense)); 16559566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", MatDenseRestoreArray_MPIDense)); 16569566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", MatDenseGetArrayRead_MPIDense)); 16579566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", MatDenseRestoreArrayRead_MPIDense)); 16589566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", MatDenseGetArrayWrite_MPIDense)); 16599566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", MatDenseRestoreArrayWrite_MPIDense)); 16609566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", MatDensePlaceArray_MPIDense)); 16619566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", MatDenseResetArray_MPIDense)); 16629566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", MatDenseReplaceArray_MPIDense)); 16639566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense)); 16649566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense)); 16659566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense)); 16669566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense)); 16679566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense)); 16689566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense)); 16699566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", MatDenseGetSubMatrix_MPIDense)); 16709566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", MatDenseRestoreSubMatrix_MPIDense)); 16719566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", MatConvert_MPIAIJ_MPIDense)); 16729566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", MatConvert_MPIDense_MPIAIJ)); 16738baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 16749566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", MatConvert_MPIDense_Elemental)); 16758baccfbdSHong Zhang #endif 1676d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 16779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", MatConvert_Dense_ScaLAPACK)); 1678d24d4204SJose E. Roman #endif 1679637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 16809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", MatConvert_MPIDense_MPIDenseCUDA)); 1681637a0070SStefano Zampini #endif 16829566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", MatMPIDenseSetPreallocation_MPIDense)); 16839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 16849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 16856718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 16869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 16879566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 16886718818eSStefano Zampini #endif 168947d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 169047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", MatConvert_MPIDense_MPIDenseHIP)); 169147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 169247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 169347d993e7Ssuyashtn #endif 16949566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", MatDenseGetColumn_MPIDense)); 16959566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", MatDenseRestoreColumn_MPIDense)); 16969566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATMPIDENSE)); 16973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1698273d9f13SBarry Smith } 1699273d9f13SBarry Smith 1700209238afSKris Buschelman /*MC 1701002d173eSKris Buschelman MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices. 1702209238afSKris Buschelman 170311a5261eSBarry Smith This matrix type is identical to `MATSEQDENSE` when constructed with a single process communicator, 170411a5261eSBarry Smith and `MATMPIDENSE` otherwise. 1705209238afSKris Buschelman 17062ef1f0ffSBarry Smith Options Database Key: 170711a5261eSBarry Smith . -mat_type dense - sets the matrix type to `MATDENSE` during a call to `MatSetFromOptions()` 1708209238afSKris Buschelman 1709209238afSKris Buschelman Level: beginner 1710209238afSKris Buschelman 17111cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATSEQDENSE`, `MATMPIDENSE`, `MATDENSECUDA`, `MATDENSEHIP` 17126947451fSStefano Zampini M*/ 17136947451fSStefano Zampini 1714273d9f13SBarry Smith /*@C 1715273d9f13SBarry Smith MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries 1716273d9f13SBarry Smith 17178f490ea3SStefano Zampini Collective 1718273d9f13SBarry Smith 1719273d9f13SBarry Smith Input Parameters: 1720fe59aa6dSJacob Faibussowitsch + B - the matrix 17212ef1f0ffSBarry Smith - data - optional location of matrix data. Set to `NULL` for PETSc 1722273d9f13SBarry Smith to control all matrix memory allocation. 1723273d9f13SBarry Smith 17242ef1f0ffSBarry Smith Level: intermediate 17252ef1f0ffSBarry Smith 1726273d9f13SBarry Smith Notes: 17272ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 1728273d9f13SBarry Smith storage by columns. 1729273d9f13SBarry Smith 1730273d9f13SBarry Smith The data input variable is intended primarily for Fortran programmers 1731273d9f13SBarry Smith who wish to allocate their own matrix memory space. Most users should 17322ef1f0ffSBarry Smith set `data` to `NULL`. 1733273d9f13SBarry Smith 17341cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMPIDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 1735273d9f13SBarry Smith @*/ 1736d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMPIDenseSetPreallocation(Mat B, PetscScalar *data) 1737d71ae5a4SJacob Faibussowitsch { 1738273d9f13SBarry Smith PetscFunctionBegin; 1739d5ea218eSStefano Zampini PetscValidHeaderSpecific(B, MAT_CLASSID, 1); 1740cac4c232SBarry Smith PetscTryMethod(B, "MatMPIDenseSetPreallocation_C", (Mat, PetscScalar *), (B, data)); 17413ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1742273d9f13SBarry Smith } 1743273d9f13SBarry Smith 1744d3042a70SBarry Smith /*@ 174511a5261eSBarry Smith MatDensePlaceArray - Allows one to replace the array in a `MATDENSE` matrix with an 1746d3042a70SBarry Smith array provided by the user. This is useful to avoid copying an array 1747d3042a70SBarry Smith into a matrix 1748d3042a70SBarry Smith 1749d3042a70SBarry Smith Not Collective 1750d3042a70SBarry Smith 1751d3042a70SBarry Smith Input Parameters: 1752d3042a70SBarry Smith + mat - the matrix 1753d3042a70SBarry Smith - array - the array in column major order 1754d3042a70SBarry Smith 17552ef1f0ffSBarry Smith Level: developer 17562ef1f0ffSBarry Smith 175711a5261eSBarry Smith Note: 175811a5261eSBarry Smith You can return to the original array with a call to `MatDenseResetArray()`. The user is responsible for freeing this array; it will not be 1759d3042a70SBarry Smith freed when the matrix is destroyed. 1760d3042a70SBarry Smith 17611cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`, 176211a5261eSBarry Smith `MatDenseReplaceArray()` 1763d3042a70SBarry Smith @*/ 1764d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDensePlaceArray(Mat mat, const PetscScalar *array) 1765d71ae5a4SJacob Faibussowitsch { 1766d3042a70SBarry Smith PetscFunctionBegin; 1767d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1768cac4c232SBarry Smith PetscUseMethod(mat, "MatDensePlaceArray_C", (Mat, const PetscScalar *), (mat, array)); 17699566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 177047d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1771637a0070SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1772637a0070SStefano Zampini #endif 17733ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1774d3042a70SBarry Smith } 1775d3042a70SBarry Smith 1776d3042a70SBarry Smith /*@ 177711a5261eSBarry Smith MatDenseResetArray - Resets the matrix array to that it previously had before the call to `MatDensePlaceArray()` 1778d3042a70SBarry Smith 1779d3042a70SBarry Smith Not Collective 1780d3042a70SBarry Smith 17812fe279fdSBarry Smith Input Parameter: 1782d3042a70SBarry Smith . mat - the matrix 1783d3042a70SBarry Smith 17842ef1f0ffSBarry Smith Level: developer 17852ef1f0ffSBarry Smith 178611a5261eSBarry Smith Note: 178711a5261eSBarry Smith You can only call this after a call to `MatDensePlaceArray()` 1788d3042a70SBarry Smith 17891cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()` 1790d3042a70SBarry Smith @*/ 1791d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseResetArray(Mat mat) 1792d71ae5a4SJacob Faibussowitsch { 1793d3042a70SBarry Smith PetscFunctionBegin; 1794d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1795cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseResetArray_C", (Mat), (mat)); 17969566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 17973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1798d3042a70SBarry Smith } 1799d3042a70SBarry Smith 1800d5ea218eSStefano Zampini /*@ 1801d5ea218eSStefano Zampini MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an 1802d5ea218eSStefano Zampini array provided by the user. This is useful to avoid copying an array 1803d5ea218eSStefano Zampini into a matrix 1804d5ea218eSStefano Zampini 1805d5ea218eSStefano Zampini Not Collective 1806d5ea218eSStefano Zampini 1807d5ea218eSStefano Zampini Input Parameters: 1808d5ea218eSStefano Zampini + mat - the matrix 1809d5ea218eSStefano Zampini - array - the array in column major order 1810d5ea218eSStefano Zampini 18112ef1f0ffSBarry Smith Level: developer 18122ef1f0ffSBarry Smith 181311a5261eSBarry Smith Note: 181411a5261eSBarry Smith The memory passed in MUST be obtained with `PetscMalloc()` and CANNOT be 1815d5ea218eSStefano Zampini freed by the user. It will be freed when the matrix is destroyed. 1816d5ea218eSStefano Zampini 18171cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatDensePlaceArray()`, `MatDenseGetArray()`, `VecReplaceArray()` 1818d5ea218eSStefano Zampini @*/ 1819d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseReplaceArray(Mat mat, const PetscScalar *array) 1820d71ae5a4SJacob Faibussowitsch { 1821d5ea218eSStefano Zampini PetscFunctionBegin; 1822d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1823cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseReplaceArray_C", (Mat, const PetscScalar *), (mat, array)); 18249566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 182547d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1826d5ea218eSStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1827d5ea218eSStefano Zampini #endif 18283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1829d5ea218eSStefano Zampini } 1830d5ea218eSStefano Zampini 1831637a0070SStefano Zampini /*@C 183211a5261eSBarry Smith MatCreateDense - Creates a matrix in `MATDENSE` format. 18338965ea79SLois Curfman McInnes 1834d083f849SBarry Smith Collective 1835db81eaa0SLois Curfman McInnes 18368965ea79SLois Curfman McInnes Input Parameters: 1837db81eaa0SLois Curfman McInnes + comm - MPI communicator 18382ef1f0ffSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if `M` is given) 18392ef1f0ffSBarry Smith . n - number of local columns (or `PETSC_DECIDE` to have calculated if `N` is given) 18402ef1f0ffSBarry Smith . M - number of global rows (or `PETSC_DECIDE` to have calculated if `m` is given) 18412ef1f0ffSBarry Smith . N - number of global columns (or `PETSC_DECIDE` to have calculated if `n` is given) 18422ef1f0ffSBarry Smith - data - optional location of matrix data. Set data to `NULL` (`PETSC_NULL_SCALAR` for Fortran users) for PETSc 1843dfc5480cSLois Curfman McInnes to control all matrix memory allocation. 18448965ea79SLois Curfman McInnes 18458965ea79SLois Curfman McInnes Output Parameter: 1846477f1c0bSLois Curfman McInnes . A - the matrix 18478965ea79SLois Curfman McInnes 18482ef1f0ffSBarry Smith Level: intermediate 18492ef1f0ffSBarry Smith 1850b259b22eSLois Curfman McInnes Notes: 18512ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 185239ddd567SLois Curfman McInnes storage by columns. 185311a5261eSBarry Smith 185411a5261eSBarry Smith Although local portions of the matrix are stored in column-major 1855002bc6daSRichard Tran Mills order, the matrix is partitioned across MPI ranks by row. 18568965ea79SLois Curfman McInnes 185718f449edSLois Curfman McInnes The data input variable is intended primarily for Fortran programmers 185818f449edSLois Curfman McInnes who wish to allocate their own matrix memory space. Most users should 18592ef1f0ffSBarry Smith set `data` to `NULL` (`PETSC_NULL_SCALAR` for Fortran users). 186018f449edSLois Curfman McInnes 18618965ea79SLois Curfman McInnes The user MUST specify either the local or global matrix dimensions 18628965ea79SLois Curfman McInnes (possibly both). 18638965ea79SLois Curfman McInnes 18641cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 18658965ea79SLois Curfman McInnes @*/ 1866d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateDense(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar *data, Mat *A) 1867d71ae5a4SJacob Faibussowitsch { 18683a40ed3dSBarry Smith PetscFunctionBegin; 18699566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 18709566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, M, N)); 18716f08ad05SPierre Jolivet PetscCall(MatSetType(*A, MATDENSE)); 18729566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(*A, data)); 18736f08ad05SPierre Jolivet PetscCall(MatMPIDenseSetPreallocation(*A, data)); 18743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 18758965ea79SLois Curfman McInnes } 18768965ea79SLois Curfman McInnes 1877d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDuplicate_MPIDense(Mat A, MatDuplicateOption cpvalues, Mat *newmat) 1878d71ae5a4SJacob Faibussowitsch { 18798965ea79SLois Curfman McInnes Mat mat; 18803501a2bdSLois Curfman McInnes Mat_MPIDense *a, *oldmat = (Mat_MPIDense *)A->data; 18818965ea79SLois Curfman McInnes 18823a40ed3dSBarry Smith PetscFunctionBegin; 1883f4259b30SLisandro Dalcin *newmat = NULL; 18849566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat)); 18859566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 18869566063dSJacob Faibussowitsch PetscCall(MatSetType(mat, ((PetscObject)A)->type_name)); 1887834f8fabSBarry Smith a = (Mat_MPIDense *)mat->data; 18885aa7edbeSHong Zhang 1889d5f3da31SBarry Smith mat->factortype = A->factortype; 1890c456f294SBarry Smith mat->assembled = PETSC_TRUE; 1891273d9f13SBarry Smith mat->preallocated = PETSC_TRUE; 18928965ea79SLois Curfman McInnes 1893e0fa3b82SLois Curfman McInnes mat->insertmode = NOT_SET_VALUES; 18943782ba37SSatish Balay a->donotstash = oldmat->donotstash; 1895e04c1aa4SHong Zhang 18969566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->rmap, &mat->rmap)); 18979566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->cmap, &mat->cmap)); 18988965ea79SLois Curfman McInnes 18999566063dSJacob Faibussowitsch PetscCall(MatDuplicate(oldmat->A, cpvalues, &a->A)); 190001b82886SBarry Smith 19018965ea79SLois Curfman McInnes *newmat = mat; 19023ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19038965ea79SLois Curfman McInnes } 19048965ea79SLois Curfman McInnes 190566976f2fSJacob Faibussowitsch static PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer) 1906d71ae5a4SJacob Faibussowitsch { 190787d5ce66SSatish Balay PetscBool isbinary; 190887d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 190987d5ce66SSatish Balay PetscBool ishdf5; 191087d5ce66SSatish Balay #endif 1911eb91f321SVaclav Hapla 1912eb91f321SVaclav Hapla PetscFunctionBegin; 1913eb91f321SVaclav Hapla PetscValidHeaderSpecific(newMat, MAT_CLASSID, 1); 1914eb91f321SVaclav Hapla PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 1915eb91f321SVaclav Hapla /* force binary viewer to load .info file if it has not yet done so */ 19169566063dSJacob Faibussowitsch PetscCall(PetscViewerSetUp(viewer)); 19179566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 191887d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 19199566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERHDF5, &ishdf5)); 192087d5ce66SSatish Balay #endif 1921eb91f321SVaclav Hapla if (isbinary) { 19229566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_Binary(newMat, viewer)); 1923eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5) 192487d5ce66SSatish Balay } else if (ishdf5) { 19259566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_HDF5(newMat, viewer)); 1926eb91f321SVaclav Hapla #endif 192798921bdaSJacob Faibussowitsch } else SETERRQ(PetscObjectComm((PetscObject)newMat), PETSC_ERR_SUP, "Viewer type %s not yet supported for reading %s matrices", ((PetscObject)viewer)->type_name, ((PetscObject)newMat)->type_name); 19283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1929eb91f321SVaclav Hapla } 1930eb91f321SVaclav Hapla 1931d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatEqual_MPIDense(Mat A, Mat B, PetscBool *flag) 1932d71ae5a4SJacob Faibussowitsch { 19336e4ee0c6SHong Zhang Mat_MPIDense *matB = (Mat_MPIDense *)B->data, *matA = (Mat_MPIDense *)A->data; 19346e4ee0c6SHong Zhang Mat a, b; 193590ace30eSBarry Smith 19366e4ee0c6SHong Zhang PetscFunctionBegin; 19376e4ee0c6SHong Zhang a = matA->A; 19386e4ee0c6SHong Zhang b = matB->A; 19392cf15c64SPierre Jolivet PetscCall(MatEqual(a, b, flag)); 19402cf15c64SPierre Jolivet PetscCall(MPIU_Allreduce(MPI_IN_PLACE, flag, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 19413ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19426e4ee0c6SHong Zhang } 194390ace30eSBarry Smith 194466976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data) 1945d71ae5a4SJacob Faibussowitsch { 19466718818eSStefano Zampini Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data; 1947baa3c1c6SHong Zhang 1948baa3c1c6SHong Zhang PetscFunctionBegin; 19499566063dSJacob Faibussowitsch PetscCall(PetscFree2(atb->sendbuf, atb->recvcounts)); 19509566063dSJacob Faibussowitsch PetscCall(MatDestroy(&atb->atb)); 19519566063dSJacob Faibussowitsch PetscCall(PetscFree(atb)); 19523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1953baa3c1c6SHong Zhang } 1954baa3c1c6SHong Zhang 195566976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data) 1956d71ae5a4SJacob Faibussowitsch { 19576718818eSStefano Zampini Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data; 1958cc48ffa7SToby Isaac 1959cc48ffa7SToby Isaac PetscFunctionBegin; 19609566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->buf[0], abt->buf[1])); 19619566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->recvcounts, abt->recvdispls)); 19629566063dSJacob Faibussowitsch PetscCall(PetscFree(abt)); 19633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1964cc48ffa7SToby Isaac } 1965cc48ffa7SToby Isaac 1966d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 1967d71ae5a4SJacob Faibussowitsch { 1968baa3c1c6SHong Zhang Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 19696718818eSStefano Zampini Mat_TransMatMultDense *atb; 1970cb20be35SHong Zhang MPI_Comm comm; 19716718818eSStefano Zampini PetscMPIInt size, *recvcounts; 19726718818eSStefano Zampini PetscScalar *carray, *sendbuf; 1973637a0070SStefano Zampini const PetscScalar *atbarray; 1974a1f9a5e6SStefano Zampini PetscInt i, cN = C->cmap->N, proc, k, j, lda; 1975e68c0b26SHong Zhang const PetscInt *ranges; 1976cb20be35SHong Zhang 1977cb20be35SHong Zhang PetscFunctionBegin; 19786718818eSStefano Zampini MatCheckProduct(C, 3); 19795f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 19806718818eSStefano Zampini atb = (Mat_TransMatMultDense *)C->product->data; 19816718818eSStefano Zampini recvcounts = atb->recvcounts; 19826718818eSStefano Zampini sendbuf = atb->sendbuf; 19836718818eSStefano Zampini 19849566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 19859566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 1986e68c0b26SHong Zhang 1987c5ef1628SHong Zhang /* compute atbarray = aseq^T * bseq */ 19889566063dSJacob Faibussowitsch PetscCall(MatTransposeMatMult(a->A, b->A, atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX, PETSC_DEFAULT, &atb->atb)); 1989cb20be35SHong Zhang 19909566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 1991cb20be35SHong Zhang 1992660d5466SHong Zhang /* arrange atbarray into sendbuf */ 19939566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(atb->atb, &atbarray)); 19949566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(atb->atb, &lda)); 1995637a0070SStefano Zampini for (proc = 0, k = 0; proc < size; proc++) { 1996baa3c1c6SHong Zhang for (j = 0; j < cN; j++) { 1997a1f9a5e6SStefano Zampini for (i = ranges[proc]; i < ranges[proc + 1]; i++) sendbuf[k++] = atbarray[i + j * lda]; 1998cb20be35SHong Zhang } 1999cb20be35SHong Zhang } 20009566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(atb->atb, &atbarray)); 2001637a0070SStefano Zampini 2002c5ef1628SHong Zhang /* sum all atbarray to local values of C */ 20039566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &carray)); 20049566063dSJacob Faibussowitsch PetscCallMPI(MPI_Reduce_scatter(sendbuf, carray, recvcounts, MPIU_SCALAR, MPIU_SUM, comm)); 20059566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &carray)); 200667af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 20079566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 20089566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 20093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2010cb20be35SHong Zhang } 2011cb20be35SHong Zhang 2012d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2013d71ae5a4SJacob Faibussowitsch { 2014cb20be35SHong Zhang MPI_Comm comm; 2015baa3c1c6SHong Zhang PetscMPIInt size; 2016660d5466SHong Zhang PetscInt cm = A->cmap->n, cM, cN = B->cmap->N; 2017baa3c1c6SHong Zhang Mat_TransMatMultDense *atb; 201847d993e7Ssuyashtn PetscBool cisdense = PETSC_FALSE; 20190acaeb71SStefano Zampini PetscInt i; 20200acaeb71SStefano Zampini const PetscInt *ranges; 2021cb20be35SHong Zhang 2022cb20be35SHong Zhang PetscFunctionBegin; 20238f83a4d9SJacob Faibussowitsch MatCheckProduct(C, 4); 20245f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 20259566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 2026cb20be35SHong Zhang if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) { 202798921bdaSJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2028cb20be35SHong Zhang } 2029cb20be35SHong Zhang 20304222ddf1SHong Zhang /* create matrix product C */ 20319566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, cm, B->cmap->n, A->cmap->N, B->cmap->N)); 203247d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 20339566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSECUDA, "")); 203447d993e7Ssuyashtn #endif 203547d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 203647d993e7Ssuyashtn PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSEHIP, "")); 203747d993e7Ssuyashtn #endif 203848a46eb9SPierre Jolivet if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)A)->type_name)); 20399566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2040baa3c1c6SHong Zhang 20414222ddf1SHong Zhang /* create data structure for reuse C */ 20429566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 20439566063dSJacob Faibussowitsch PetscCall(PetscNew(&atb)); 20444222ddf1SHong Zhang cM = C->rmap->N; 20459566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(cM * cN, &atb->sendbuf, size, &atb->recvcounts)); 20469566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 20470acaeb71SStefano Zampini for (i = 0; i < size; i++) atb->recvcounts[i] = (ranges[i + 1] - ranges[i]) * cN; 2048baa3c1c6SHong Zhang 20496718818eSStefano Zampini C->product->data = atb; 20506718818eSStefano Zampini C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense; 20513ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2052cb20be35SHong Zhang } 2053cb20be35SHong Zhang 2054d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2055d71ae5a4SJacob Faibussowitsch { 2056cc48ffa7SToby Isaac MPI_Comm comm; 2057cc48ffa7SToby Isaac PetscMPIInt i, size; 2058cc48ffa7SToby Isaac PetscInt maxRows, bufsiz; 2059cc48ffa7SToby Isaac PetscMPIInt tag; 20604222ddf1SHong Zhang PetscInt alg; 2061cc48ffa7SToby Isaac Mat_MatTransMultDense *abt; 20624222ddf1SHong Zhang Mat_Product *product = C->product; 20634222ddf1SHong Zhang PetscBool flg; 2064cc48ffa7SToby Isaac 2065cc48ffa7SToby Isaac PetscFunctionBegin; 20666718818eSStefano Zampini MatCheckProduct(C, 4); 20675f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 20684222ddf1SHong Zhang /* check local size of A and B */ 20695f80ce2aSJacob Faibussowitsch PetscCheck(A->cmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")", A->cmap->n, B->cmap->n); 2070cc48ffa7SToby Isaac 20719566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "allgatherv", &flg)); 2072637a0070SStefano Zampini alg = flg ? 0 : 1; 2073cc48ffa7SToby Isaac 20744222ddf1SHong Zhang /* setup matrix product C */ 20759566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, A->rmap->n, B->rmap->n, A->rmap->N, B->rmap->N)); 20769566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATMPIDENSE)); 20779566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 20789566063dSJacob Faibussowitsch PetscCall(PetscObjectGetNewTag((PetscObject)C, &tag)); 20794222ddf1SHong Zhang 20804222ddf1SHong Zhang /* create data structure for reuse C */ 20819566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 20829566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 20839566063dSJacob Faibussowitsch PetscCall(PetscNew(&abt)); 2084cc48ffa7SToby Isaac abt->tag = tag; 2085faa55883SToby Isaac abt->alg = alg; 2086faa55883SToby Isaac switch (alg) { 20874222ddf1SHong Zhang case 1: /* alg: "cyclic" */ 2088cc48ffa7SToby Isaac for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i])); 2089cc48ffa7SToby Isaac bufsiz = A->cmap->N * maxRows; 20909566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(bufsiz, &(abt->buf[0]), bufsiz, &(abt->buf[1]))); 2091faa55883SToby Isaac break; 20924222ddf1SHong Zhang default: /* alg: "allgatherv" */ 20939566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &(abt->buf[0]), B->rmap->N * B->cmap->N, &(abt->buf[1]))); 20949566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(size, &(abt->recvcounts), size + 1, &(abt->recvdispls))); 2095faa55883SToby Isaac for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N; 2096faa55883SToby Isaac for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i]; 2097faa55883SToby Isaac break; 2098faa55883SToby Isaac } 2099cc48ffa7SToby Isaac 21006718818eSStefano Zampini C->product->data = abt; 21016718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense; 21024222ddf1SHong Zhang C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense; 21033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2104cc48ffa7SToby Isaac } 2105cc48ffa7SToby Isaac 2106d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C) 2107d71ae5a4SJacob Faibussowitsch { 2108cc48ffa7SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 21096718818eSStefano Zampini Mat_MatTransMultDense *abt; 2110cc48ffa7SToby Isaac MPI_Comm comm; 2111cc48ffa7SToby Isaac PetscMPIInt rank, size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom; 2112f4259b30SLisandro Dalcin PetscScalar *sendbuf, *recvbuf = NULL, *cv; 2113cc48ffa7SToby Isaac PetscInt i, cK = A->cmap->N, k, j, bn; 2114cc48ffa7SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2115637a0070SStefano Zampini const PetscScalar *av, *bv; 211623fff9afSBarry Smith PetscBLASInt cm, cn, ck, alda, blda = 0, clda; 2117cc48ffa7SToby Isaac MPI_Request reqs[2]; 2118cc48ffa7SToby Isaac const PetscInt *ranges; 2119cc48ffa7SToby Isaac 2120cc48ffa7SToby Isaac PetscFunctionBegin; 21216718818eSStefano Zampini MatCheckProduct(C, 3); 21225f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 21236718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 21249566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 21259566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 21269566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 21279566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 21289566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 21299566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 21309566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 21319566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 21329566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &i)); 21339566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &blda)); 21349566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 21359566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 21369566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(B, &ranges)); 2137cc48ffa7SToby Isaac bn = B->rmap->n; 2138637a0070SStefano Zampini if (blda == bn) { 2139637a0070SStefano Zampini sendbuf = (PetscScalar *)bv; 2140cc48ffa7SToby Isaac } else { 2141cc48ffa7SToby Isaac sendbuf = abt->buf[0]; 2142cc48ffa7SToby Isaac for (k = 0, i = 0; i < cK; i++) { 2143ad540459SPierre Jolivet for (j = 0; j < bn; j++, k++) sendbuf[k] = bv[i * blda + j]; 2144cc48ffa7SToby Isaac } 2145cc48ffa7SToby Isaac } 2146cc48ffa7SToby Isaac if (size > 1) { 2147cc48ffa7SToby Isaac sendto = (rank + size - 1) % size; 2148cc48ffa7SToby Isaac recvfrom = (rank + size + 1) % size; 2149cc48ffa7SToby Isaac } else { 2150cc48ffa7SToby Isaac sendto = recvfrom = 0; 2151cc48ffa7SToby Isaac } 21529566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 21539566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 2154cc48ffa7SToby Isaac recvisfrom = rank; 2155cc48ffa7SToby Isaac for (i = 0; i < size; i++) { 2156cc48ffa7SToby Isaac /* we have finished receiving in sending, bufs can be read/modified */ 2157cc48ffa7SToby Isaac PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */ 2158cc48ffa7SToby Isaac PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom]; 2159cc48ffa7SToby Isaac 2160cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2161cc48ffa7SToby Isaac /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */ 2162cc48ffa7SToby Isaac sendsiz = cK * bn; 2163cc48ffa7SToby Isaac recvsiz = cK * nextbn; 2164cc48ffa7SToby Isaac recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1]; 21659566063dSJacob Faibussowitsch PetscCallMPI(MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0])); 21669566063dSJacob Faibussowitsch PetscCallMPI(MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1])); 2167cc48ffa7SToby Isaac } 2168cc48ffa7SToby Isaac 2169cc48ffa7SToby Isaac /* local aseq * sendbuf^T */ 21709566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn)); 2171792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "T", &cm, &cn, &ck, &_DOne, av, &alda, sendbuf, &cn, &_DZero, cv + clda * ranges[recvisfrom], &clda)); 2172cc48ffa7SToby Isaac 2173cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2174cc48ffa7SToby Isaac /* wait for the sends and receives to complete, swap sendbuf and recvbuf */ 21759566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE)); 2176cc48ffa7SToby Isaac } 2177cc48ffa7SToby Isaac bn = nextbn; 2178cc48ffa7SToby Isaac recvisfrom = nextrecvisfrom; 2179cc48ffa7SToby Isaac sendbuf = recvbuf; 2180cc48ffa7SToby Isaac } 21819566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 21829566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 21839566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 218467af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 21859566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 21869566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 21873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2188cc48ffa7SToby Isaac } 2189cc48ffa7SToby Isaac 2190d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C) 2191d71ae5a4SJacob Faibussowitsch { 2192faa55883SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 21936718818eSStefano Zampini Mat_MatTransMultDense *abt; 2194faa55883SToby Isaac MPI_Comm comm; 2195637a0070SStefano Zampini PetscMPIInt size; 2196637a0070SStefano Zampini PetscScalar *cv, *sendbuf, *recvbuf; 2197637a0070SStefano Zampini const PetscScalar *av, *bv; 2198637a0070SStefano Zampini PetscInt blda, i, cK = A->cmap->N, k, j, bn; 2199faa55883SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2200637a0070SStefano Zampini PetscBLASInt cm, cn, ck, alda, clda; 2201faa55883SToby Isaac 2202faa55883SToby Isaac PetscFunctionBegin; 22036718818eSStefano Zampini MatCheckProduct(C, 3); 22045f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 22056718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 22069566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 22079566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22089566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 22099566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 22109566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 22119566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 22129566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 22139566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &blda)); 22149566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 22159566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 2216faa55883SToby Isaac /* copy transpose of B into buf[0] */ 2217faa55883SToby Isaac bn = B->rmap->n; 2218faa55883SToby Isaac sendbuf = abt->buf[0]; 2219faa55883SToby Isaac recvbuf = abt->buf[1]; 2220faa55883SToby Isaac for (k = 0, j = 0; j < bn; j++) { 2221ad540459SPierre Jolivet for (i = 0; i < cK; i++, k++) sendbuf[k] = bv[i * blda + j]; 2222faa55883SToby Isaac } 22239566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 22249566063dSJacob Faibussowitsch PetscCallMPI(MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm)); 22259566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 22269566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 22279566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->cmap->n, &cn)); 2228792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "N", &cm, &cn, &ck, &_DOne, av, &alda, recvbuf, &ck, &_DZero, cv, &clda)); 22299566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 22309566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 22319566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 223267af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 22339566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 22349566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 22353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2236faa55883SToby Isaac } 2237faa55883SToby Isaac 2238d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2239d71ae5a4SJacob Faibussowitsch { 22406718818eSStefano Zampini Mat_MatTransMultDense *abt; 2241faa55883SToby Isaac 2242faa55883SToby Isaac PetscFunctionBegin; 22436718818eSStefano Zampini MatCheckProduct(C, 3); 22445f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 22456718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 2246faa55883SToby Isaac switch (abt->alg) { 2247d71ae5a4SJacob Faibussowitsch case 1: 2248d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C)); 2249d71ae5a4SJacob Faibussowitsch break; 2250d71ae5a4SJacob Faibussowitsch default: 2251d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C)); 2252d71ae5a4SJacob Faibussowitsch break; 2253faa55883SToby Isaac } 22543ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2255faa55883SToby Isaac } 2256faa55883SToby Isaac 225766976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data) 2258d71ae5a4SJacob Faibussowitsch { 22596718818eSStefano Zampini Mat_MatMultDense *ab = (Mat_MatMultDense *)data; 2260320f2790SHong Zhang 2261320f2790SHong Zhang PetscFunctionBegin; 22629566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ce)); 22639566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ae)); 22649566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Be)); 22659566063dSJacob Faibussowitsch PetscCall(PetscFree(ab)); 22663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2267320f2790SHong Zhang } 2268320f2790SHong Zhang 22695d8c7819SPierre Jolivet static PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2270d71ae5a4SJacob Faibussowitsch { 22716718818eSStefano Zampini Mat_MatMultDense *ab; 22725d8c7819SPierre Jolivet Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 2273320f2790SHong Zhang 2274320f2790SHong Zhang PetscFunctionBegin; 22756718818eSStefano Zampini MatCheckProduct(C, 3); 22765f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Missing product data"); 22776718818eSStefano Zampini ab = (Mat_MatMultDense *)C->product->data; 22785d8c7819SPierre Jolivet if (ab->Ae && ab->Ce) { 22795d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 22809566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(A, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Ae)); 22819566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(B, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Be)); 22829566063dSJacob Faibussowitsch PetscCall(MatMatMultNumeric_Elemental(ab->Ae, ab->Be, ab->Ce)); 22839566063dSJacob Faibussowitsch PetscCall(MatConvert(ab->Ce, MATMPIDENSE, MAT_REUSE_MATRIX, &C)); 22845d8c7819SPierre Jolivet #else 22855d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 22865d8c7819SPierre Jolivet #endif 22875d8c7819SPierre Jolivet } else { 22885d8c7819SPierre Jolivet const PetscScalar *read; 22895d8c7819SPierre Jolivet PetscScalar *write; 22905d8c7819SPierre Jolivet PetscInt lda; 22915d8c7819SPierre Jolivet 22925d8c7819SPierre Jolivet PetscCall(MatDenseGetLDA(B, &lda)); 22935d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayRead(B, &read)); 22945d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayWrite(ab->Be, &write)); 22955d8c7819SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); /* cannot be done during the symbolic phase because of possible calls to MatProductReplaceMats() */ 22965d8c7819SPierre Jolivet for (PetscInt i = 0; i < C->cmap->N; ++i) { 22975d8c7819SPierre Jolivet PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 22985d8c7819SPierre Jolivet PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 22995d8c7819SPierre Jolivet } 23005d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayWrite(ab->Be, &write)); 23015d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(B, &read)); 23025d8c7819SPierre Jolivet PetscCall(MatMatMultNumeric_SeqDense_SeqDense(((Mat_MPIDense *)(A->data))->A, ab->Be, ((Mat_MPIDense *)(C->data))->A)); 23035d8c7819SPierre Jolivet } 23043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2305320f2790SHong Zhang } 2306320f2790SHong Zhang 2307d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2308d71ae5a4SJacob Faibussowitsch { 23095d8c7819SPierre Jolivet Mat_Product *product = C->product; 23105d8c7819SPierre Jolivet PetscInt alg; 2311320f2790SHong Zhang Mat_MatMultDense *ab; 23125d8c7819SPierre Jolivet PetscBool flg; 2313320f2790SHong Zhang 2314320f2790SHong Zhang PetscFunctionBegin; 23156718818eSStefano Zampini MatCheckProduct(C, 4); 23165f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 23174222ddf1SHong Zhang /* check local size of A and B */ 23185d8c7819SPierre Jolivet PetscCheck(A->cmap->rstart == B->rmap->rstart && A->cmap->rend == B->rmap->rend, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ", %" PetscInt_FMT ")", 23195d8c7819SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2320320f2790SHong Zhang 23215d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "petsc", &flg)); 23225d8c7819SPierre Jolivet alg = flg ? 0 : 1; 23234222ddf1SHong Zhang 23244222ddf1SHong Zhang /* setup C */ 23255d8c7819SPierre Jolivet PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, A->rmap->N, B->cmap->N)); 23265d8c7819SPierre Jolivet PetscCall(MatSetType(C, MATMPIDENSE)); 23279566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2328320f2790SHong Zhang 2329320f2790SHong Zhang /* create data structure for reuse Cdense */ 23309566063dSJacob Faibussowitsch PetscCall(PetscNew(&ab)); 23315d8c7819SPierre Jolivet 23325d8c7819SPierre Jolivet switch (alg) { 23335d8c7819SPierre Jolivet case 1: /* alg: "elemental" */ 23345d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 23355d8c7819SPierre Jolivet /* create elemental matrices Ae and Be */ 23365d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &ab->Ae)); 23375d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Ae, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 23385d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Ae, MATELEMENTAL)); 23395d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Ae)); 23405d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Ae, MAT_ROW_ORIENTED, PETSC_FALSE)); 23415d8c7819SPierre Jolivet 23425d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &ab->Be)); 23435d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Be, PETSC_DECIDE, PETSC_DECIDE, B->rmap->N, B->cmap->N)); 23445d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Be, MATELEMENTAL)); 23455d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Be)); 23465d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Be, MAT_ROW_ORIENTED, PETSC_FALSE)); 23475d8c7819SPierre Jolivet 23485d8c7819SPierre Jolivet /* compute symbolic Ce = Ae*Be */ 23495d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)C), &ab->Ce)); 23505d8c7819SPierre Jolivet PetscCall(MatMatMultSymbolic_Elemental(ab->Ae, ab->Be, fill, ab->Ce)); 23515d8c7819SPierre Jolivet #else 23525d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 23535d8c7819SPierre Jolivet #endif 23545d8c7819SPierre Jolivet break; 23555d8c7819SPierre Jolivet default: /* alg: "petsc" */ 23565d8c7819SPierre Jolivet ab->Ae = NULL; 23575d8c7819SPierre Jolivet PetscCall(MatCreateSeqDense(PETSC_COMM_SELF, A->cmap->N, B->cmap->N, NULL, &ab->Be)); 23585d8c7819SPierre Jolivet ab->Ce = NULL; 23595d8c7819SPierre Jolivet break; 23605d8c7819SPierre Jolivet } 23616718818eSStefano Zampini 23626718818eSStefano Zampini C->product->data = ab; 23636718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense; 23644222ddf1SHong Zhang C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense; 23653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2366320f2790SHong Zhang } 23672ef1f0ffSBarry Smith 2368d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C) 2369d71ae5a4SJacob Faibussowitsch { 23705d8c7819SPierre Jolivet Mat_Product *product = C->product; 23715d8c7819SPierre Jolivet const char *algTypes[2] = {"petsc", "elemental"}; 23725d8c7819SPierre Jolivet PetscInt alg, nalg = PetscDefined(HAVE_ELEMENTAL) ? 2 : 1; 23735d8c7819SPierre Jolivet PetscBool flg = PETSC_FALSE; 2374320f2790SHong Zhang PetscFunctionBegin; 23755d8c7819SPierre Jolivet 23765d8c7819SPierre Jolivet /* Set default algorithm */ 23775d8c7819SPierre Jolivet alg = 0; /* default is petsc */ 23785d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "default", &flg)); 23795d8c7819SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 23805d8c7819SPierre Jolivet 23815d8c7819SPierre Jolivet /* Get runtime option */ 23825d8c7819SPierre Jolivet PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_AB", "Mat"); 23835d8c7819SPierre Jolivet PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_AB", algTypes, nalg, algTypes[alg], &alg, &flg)); 23845d8c7819SPierre Jolivet PetscOptionsEnd(); 23855d8c7819SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 23865d8c7819SPierre Jolivet 23874222ddf1SHong Zhang C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense; 23884222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_AB; 23893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2390320f2790SHong Zhang } 239186aefd0dSHong Zhang 2392d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C) 2393d71ae5a4SJacob Faibussowitsch { 23944222ddf1SHong Zhang Mat_Product *product = C->product; 23954222ddf1SHong Zhang Mat A = product->A, B = product->B; 23964222ddf1SHong Zhang 23974222ddf1SHong Zhang PetscFunctionBegin; 239807e90273SPierre Jolivet PetscCheck(A->rmap->rstart == B->rmap->rstart && A->rmap->rend == B->rmap->rend, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")", 239907e90273SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 24006718818eSStefano Zampini C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense; 24016718818eSStefano Zampini C->ops->productsymbolic = MatProductSymbolic_AtB; 24023ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 24034222ddf1SHong Zhang } 24044222ddf1SHong Zhang 2405d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C) 2406d71ae5a4SJacob Faibussowitsch { 24074222ddf1SHong Zhang Mat_Product *product = C->product; 24084222ddf1SHong Zhang const char *algTypes[2] = {"allgatherv", "cyclic"}; 24094222ddf1SHong Zhang PetscInt alg, nalg = 2; 24104222ddf1SHong Zhang PetscBool flg = PETSC_FALSE; 24114222ddf1SHong Zhang 24124222ddf1SHong Zhang PetscFunctionBegin; 24134222ddf1SHong Zhang /* Set default algorithm */ 24144222ddf1SHong Zhang alg = 0; /* default is allgatherv */ 24159566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "default", &flg)); 241648a46eb9SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 24174222ddf1SHong Zhang 24184222ddf1SHong Zhang /* Get runtime option */ 24194222ddf1SHong Zhang if (product->api_user) { 2420d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatMatTransposeMult", "Mat"); 24219566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via", "Algorithmic approach", "MatMatTransposeMult", algTypes, nalg, algTypes[alg], &alg, &flg)); 2422d0609cedSBarry Smith PetscOptionsEnd(); 24234222ddf1SHong Zhang } else { 2424d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_ABt", "Mat"); 24259566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_ABt", algTypes, nalg, algTypes[alg], &alg, &flg)); 2426d0609cedSBarry Smith PetscOptionsEnd(); 24274222ddf1SHong Zhang } 242848a46eb9SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 24294222ddf1SHong Zhang 24304222ddf1SHong Zhang C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense; 24314222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_ABt; 24323ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 24334222ddf1SHong Zhang } 24344222ddf1SHong Zhang 24355d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C) 2436d71ae5a4SJacob Faibussowitsch { 24374222ddf1SHong Zhang Mat_Product *product = C->product; 24384222ddf1SHong Zhang 24394222ddf1SHong Zhang PetscFunctionBegin; 24404222ddf1SHong Zhang switch (product->type) { 2441d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AB: 2442d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AB(C)); 2443d71ae5a4SJacob Faibussowitsch break; 2444d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AtB: 2445d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AtB(C)); 2446d71ae5a4SJacob Faibussowitsch break; 2447d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABt: 2448d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_ABt(C)); 2449d71ae5a4SJacob Faibussowitsch break; 2450d71ae5a4SJacob Faibussowitsch default: 2451d71ae5a4SJacob Faibussowitsch break; 24524222ddf1SHong Zhang } 24533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 24544222ddf1SHong Zhang } 2455