1ed3cc1f0SBarry Smith /* 2ed3cc1f0SBarry Smith Basic functions for basic parallel dense matrices. 347d993e7Ssuyashtn Portions of this code are under: 447d993e7Ssuyashtn Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved. 5ed3cc1f0SBarry Smith */ 6ed3cc1f0SBarry Smith 7c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h> /*I "petscmat.h" I*/ 88949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h> 9baa3c1c6SHong Zhang #include <petscblaslapack.h> 104186a4bbSPierre Jolivet #include <petsc/private/vecimpl.h> 11d016bddeSToby Isaac #include <petscdevice.h> 12d016bddeSToby Isaac #include <petsc/private/deviceimpl.h> 138965ea79SLois Curfman McInnes 14ab92ecdeSBarry Smith /*@ 1511a5261eSBarry Smith MatDenseGetLocalMatrix - For a `MATMPIDENSE` or `MATSEQDENSE` matrix returns the sequential 16ab92ecdeSBarry Smith matrix that represents the operator. For sequential matrices it returns itself. 17ab92ecdeSBarry Smith 18ab92ecdeSBarry Smith Input Parameter: 192ef1f0ffSBarry Smith . A - the sequential or MPI `MATDENSE` matrix 20ab92ecdeSBarry Smith 21ab92ecdeSBarry Smith Output Parameter: 22ab92ecdeSBarry Smith . B - the inner matrix 23ab92ecdeSBarry Smith 248e6c10adSSatish Balay Level: intermediate 258e6c10adSSatish Balay 261cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MATMPIDENSE`, `MATSEQDENSE` 27ab92ecdeSBarry Smith @*/ 28d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetLocalMatrix(Mat A, Mat *B) 29d71ae5a4SJacob Faibussowitsch { 30ab92ecdeSBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 31ace3abfcSBarry Smith PetscBool flg; 32ab92ecdeSBarry Smith 33ab92ecdeSBarry Smith PetscFunctionBegin; 34d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 354f572ea9SToby Isaac PetscAssertPointer(B, 2); 369566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATMPIDENSE, &flg)); 372205254eSKarl Rupp if (flg) *B = mat->A; 38f140bc17SStefano Zampini else { 399566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATSEQDENSE, &flg)); 4028b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for matrix type %s", ((PetscObject)A)->type_name); 41f140bc17SStefano Zampini *B = A; 42f140bc17SStefano Zampini } 433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 44ab92ecdeSBarry Smith } 45ab92ecdeSBarry Smith 4666976f2fSJacob Faibussowitsch static PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s) 47d71ae5a4SJacob Faibussowitsch { 48a76f77c3SStefano Zampini Mat_MPIDense *Amat = (Mat_MPIDense *)A->data; 49a76f77c3SStefano Zampini Mat_MPIDense *Bmat = (Mat_MPIDense *)B->data; 50a76f77c3SStefano Zampini 51a76f77c3SStefano Zampini PetscFunctionBegin; 529566063dSJacob Faibussowitsch PetscCall(MatCopy(Amat->A, Bmat->A, s)); 533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 54a76f77c3SStefano Zampini } 55a76f77c3SStefano Zampini 56d71ae5a4SJacob Faibussowitsch PetscErrorCode MatShift_MPIDense(Mat A, PetscScalar alpha) 57d71ae5a4SJacob Faibussowitsch { 582f605a99SJose E. Roman Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 592f605a99SJose E. Roman PetscInt j, lda, rstart = A->rmap->rstart, rend = A->rmap->rend, rend2; 602f605a99SJose E. Roman PetscScalar *v; 612f605a99SJose E. Roman 622f605a99SJose E. Roman PetscFunctionBegin; 632f605a99SJose E. Roman PetscCall(MatDenseGetArray(mat->A, &v)); 642f605a99SJose E. Roman PetscCall(MatDenseGetLDA(mat->A, &lda)); 652f605a99SJose E. Roman rend2 = PetscMin(rend, A->cmap->N); 662f605a99SJose E. Roman if (rend2 > rstart) { 672f605a99SJose E. Roman for (j = rstart; j < rend2; j++) v[j - rstart + j * lda] += alpha; 682f605a99SJose E. Roman PetscCall(PetscLogFlops(rend2 - rstart)); 692f605a99SJose E. Roman } 702f605a99SJose E. Roman PetscCall(MatDenseRestoreArray(mat->A, &v)); 713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 722f605a99SJose E. Roman } 732f605a99SJose E. Roman 7466976f2fSJacob Faibussowitsch static PetscErrorCode MatGetRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 75d71ae5a4SJacob Faibussowitsch { 76ba8c8a56SBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 77d0f46423SBarry Smith PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 78ba8c8a56SBarry Smith 79ba8c8a56SBarry Smith PetscFunctionBegin; 80aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 81ba8c8a56SBarry Smith lrow = row - rstart; 829566063dSJacob Faibussowitsch PetscCall(MatGetRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 84ba8c8a56SBarry Smith } 85ba8c8a56SBarry Smith 8666976f2fSJacob Faibussowitsch static PetscErrorCode MatRestoreRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 87d71ae5a4SJacob Faibussowitsch { 88637a0070SStefano Zampini Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 89637a0070SStefano Zampini PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 90ba8c8a56SBarry Smith 91ba8c8a56SBarry Smith PetscFunctionBegin; 92aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 93637a0070SStefano Zampini lrow = row - rstart; 949566063dSJacob Faibussowitsch PetscCall(MatRestoreRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 96ba8c8a56SBarry Smith } 97ba8c8a56SBarry Smith 9866976f2fSJacob Faibussowitsch static PetscErrorCode MatGetDiagonalBlock_MPIDense(Mat A, Mat *a) 99d71ae5a4SJacob Faibussowitsch { 1000de54da6SSatish Balay Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 101d0f46423SBarry Smith PetscInt m = A->rmap->n, rstart = A->rmap->rstart; 10287828ca2SBarry Smith PetscScalar *array; 1030de54da6SSatish Balay MPI_Comm comm; 1044b6ae80fSStefano Zampini PetscBool flg; 10511bd1e4dSLisandro Dalcin Mat B; 1060de54da6SSatish Balay 1070de54da6SSatish Balay PetscFunctionBegin; 1089566063dSJacob Faibussowitsch PetscCall(MatHasCongruentLayouts(A, &flg)); 10928b400f6SJacob Faibussowitsch PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only square matrices supported."); 1109566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery((PetscObject)A, "DiagonalBlock", (PetscObject *)&B)); 111616b8fbbSStefano Zampini if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */ 112a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 1139566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSECUDA, &flg)); 11428b400f6SJacob Faibussowitsch PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSECUDA); 115a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 11647d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSEHIP, &flg)); 11747d993e7Ssuyashtn PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSEHIP); 11847d993e7Ssuyashtn #endif 119f4f49eeaSPierre Jolivet PetscCall(PetscObjectGetComm((PetscObject)mdn->A, &comm)); 1209566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &B)); 1219566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, m, m, m, m)); 1229566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)mdn->A)->type_name)); 1239566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, (const PetscScalar **)&array)); 1249566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(B, array + m * rstart)); 1259566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, (const PetscScalar **)&array)); 1269566063dSJacob Faibussowitsch PetscCall(PetscObjectCompose((PetscObject)A, "DiagonalBlock", (PetscObject)B)); 12711bd1e4dSLisandro Dalcin *a = B; 1289566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 1292205254eSKarl Rupp } else *a = B; 1303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1310de54da6SSatish Balay } 1320de54da6SSatish Balay 13366976f2fSJacob Faibussowitsch static PetscErrorCode MatSetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv) 134d71ae5a4SJacob Faibussowitsch { 13539b7565bSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)mat->data; 136d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 137ace3abfcSBarry Smith PetscBool roworiented = A->roworiented; 1388965ea79SLois Curfman McInnes 1393a40ed3dSBarry Smith PetscFunctionBegin; 1408965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 1415ef9f2a5SBarry Smith if (idxm[i] < 0) continue; 14208401ef6SPierre Jolivet PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 1438965ea79SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 1448965ea79SLois Curfman McInnes row = idxm[i] - rstart; 14539b7565bSBarry Smith if (roworiented) { 146de0a9f35SPierre Jolivet PetscCall(MatSetValues(A->A, 1, &row, n, idxn, PetscSafePointerPlusOffset(v, i * n), addv)); 1473a40ed3dSBarry Smith } else { 1488965ea79SLois Curfman McInnes for (j = 0; j < n; j++) { 1495ef9f2a5SBarry Smith if (idxn[j] < 0) continue; 15008401ef6SPierre Jolivet PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 151de0a9f35SPierre Jolivet PetscCall(MatSetValues(A->A, 1, &row, 1, &idxn[j], PetscSafePointerPlusOffset(v, i + j * m), addv)); 15239b7565bSBarry Smith } 1538965ea79SLois Curfman McInnes } 1542205254eSKarl Rupp } else if (!A->donotstash) { 1555080c13bSMatthew G Knepley mat->assembled = PETSC_FALSE; 15639b7565bSBarry Smith if (roworiented) { 157de0a9f35SPierre Jolivet PetscCall(MatStashValuesRow_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i * n), PETSC_FALSE)); 158d36fbae8SSatish Balay } else { 159de0a9f35SPierre Jolivet PetscCall(MatStashValuesCol_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i), m, PETSC_FALSE)); 16039b7565bSBarry Smith } 161b49de8d1SLois Curfman McInnes } 162b49de8d1SLois Curfman McInnes } 1633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 164b49de8d1SLois Curfman McInnes } 165b49de8d1SLois Curfman McInnes 16666976f2fSJacob Faibussowitsch static PetscErrorCode MatGetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], PetscScalar v[]) 167d71ae5a4SJacob Faibussowitsch { 168b49de8d1SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 169d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 170b49de8d1SLois Curfman McInnes 1713a40ed3dSBarry Smith PetscFunctionBegin; 172b49de8d1SLois Curfman McInnes for (i = 0; i < m; i++) { 17354c59aa7SJacob Faibussowitsch if (idxm[i] < 0) continue; /* negative row */ 17454c59aa7SJacob Faibussowitsch PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 175966bd95aSPierre Jolivet PetscCheck(idxm[i] >= rstart && idxm[i] < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only local values currently supported"); 176b49de8d1SLois Curfman McInnes row = idxm[i] - rstart; 177b49de8d1SLois Curfman McInnes for (j = 0; j < n; j++) { 17854c59aa7SJacob Faibussowitsch if (idxn[j] < 0) continue; /* negative column */ 17954c59aa7SJacob Faibussowitsch PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1809566063dSJacob Faibussowitsch PetscCall(MatGetValues(mdn->A, 1, &row, 1, &idxn[j], v + i * n + j)); 181b49de8d1SLois Curfman McInnes } 1828965ea79SLois Curfman McInnes } 1833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1848965ea79SLois Curfman McInnes } 1858965ea79SLois Curfman McInnes 186d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A, PetscInt *lda) 187d71ae5a4SJacob Faibussowitsch { 18849a6ff4bSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 18949a6ff4bSBarry Smith 19049a6ff4bSBarry Smith PetscFunctionBegin; 1919566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, lda)); 1923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19349a6ff4bSBarry Smith } 19449a6ff4bSBarry Smith 195d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A, PetscInt lda) 196d71ae5a4SJacob Faibussowitsch { 197ad16ce7aSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 19847d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 199ad16ce7aSStefano Zampini 200ad16ce7aSStefano Zampini PetscFunctionBegin; 20117359960SJose E. Roman if (!a->A) { 20228b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2039566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 2049566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 2059566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 2069566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N)); 207a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 20847d993e7Ssuyashtn PetscBool iscuda; 2099566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda)); 21047d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 211a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 21247d993e7Ssuyashtn PetscBool iship; 21347d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSEHIP, &iship)); 21447d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 21547d993e7Ssuyashtn #endif 21647d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 21717359960SJose E. Roman } 2189566063dSJacob Faibussowitsch PetscCall(MatDenseSetLDA(a->A, lda)); 2193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 220ad16ce7aSStefano Zampini } 221ad16ce7aSStefano Zampini 222d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArray_MPIDense(Mat A, PetscScalar **array) 223d71ae5a4SJacob Faibussowitsch { 224ff14e315SSatish Balay Mat_MPIDense *a = (Mat_MPIDense *)A->data; 225ff14e315SSatish Balay 2263a40ed3dSBarry Smith PetscFunctionBegin; 22728b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2289566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, array)); 2293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 230ff14e315SSatish Balay } 231ff14e315SSatish Balay 232f1e99121SPierre Jolivet static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A, PetscScalar **array) 233d71ae5a4SJacob Faibussowitsch { 2348572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2358572280aSBarry Smith 2368572280aSBarry Smith PetscFunctionBegin; 23728b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 238f1e99121SPierre Jolivet PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)array)); 2393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2408572280aSBarry Smith } 2418572280aSBarry Smith 242d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A, PetscScalar **array) 243d71ae5a4SJacob Faibussowitsch { 2446947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2456947451fSStefano Zampini 2466947451fSStefano Zampini PetscFunctionBegin; 24728b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2489566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, array)); 2493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2506947451fSStefano Zampini } 2516947451fSStefano Zampini 252d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A, const PetscScalar *array) 253d71ae5a4SJacob Faibussowitsch { 254d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 255d3042a70SBarry Smith 256d3042a70SBarry Smith PetscFunctionBegin; 25728b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 25828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2599566063dSJacob Faibussowitsch PetscCall(MatDensePlaceArray(a->A, array)); 2603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 261d3042a70SBarry Smith } 262d3042a70SBarry Smith 263d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseResetArray_MPIDense(Mat A) 264d71ae5a4SJacob Faibussowitsch { 265d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 266d3042a70SBarry Smith 267d3042a70SBarry Smith PetscFunctionBegin; 26828b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 26928b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2709566063dSJacob Faibussowitsch PetscCall(MatDenseResetArray(a->A)); 2713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 272d3042a70SBarry Smith } 273d3042a70SBarry Smith 274d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A, const PetscScalar *array) 275d71ae5a4SJacob Faibussowitsch { 276d5ea218eSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 277d5ea218eSStefano Zampini 278d5ea218eSStefano Zampini PetscFunctionBegin; 27928b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 28028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2819566063dSJacob Faibussowitsch PetscCall(MatDenseReplaceArray(a->A, array)); 2823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 283d5ea218eSStefano Zampini } 284d5ea218eSStefano Zampini 285d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A, IS isrow, IS iscol, MatReuse scall, Mat *B) 286d71ae5a4SJacob Faibussowitsch { 287ca3fa75bSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data, *newmatd; 288637a0070SStefano Zampini PetscInt lda, i, j, rstart, rend, nrows, ncols, Ncols, nlrows, nlcols; 2895d0c19d7SBarry Smith const PetscInt *irow, *icol; 290637a0070SStefano Zampini const PetscScalar *v; 291637a0070SStefano Zampini PetscScalar *bv; 292ca3fa75bSLois Curfman McInnes Mat newmat; 2934aa3045dSJed Brown IS iscol_local; 29442a884f0SBarry Smith MPI_Comm comm_is, comm_mat; 295ca3fa75bSLois Curfman McInnes 296ca3fa75bSLois Curfman McInnes PetscFunctionBegin; 2979566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm_mat)); 2989566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)iscol, &comm_is)); 29908401ef6SPierre Jolivet PetscCheck(comm_mat == comm_is, PETSC_COMM_SELF, PETSC_ERR_ARG_NOTSAMECOMM, "IS communicator must match matrix communicator"); 30042a884f0SBarry Smith 3019566063dSJacob Faibussowitsch PetscCall(ISAllGather(iscol, &iscol_local)); 3029566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &irow)); 3039566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol_local, &icol)); 3049566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(isrow, &nrows)); 3059566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(iscol, &ncols)); 3069566063dSJacob Faibussowitsch PetscCall(ISGetSize(iscol, &Ncols)); /* global number of columns, size of iscol_local */ 307ca3fa75bSLois Curfman McInnes 308ca3fa75bSLois Curfman McInnes /* No parallel redistribution currently supported! Should really check each index set 309da81f932SPierre Jolivet to confirm that it is OK. ... Currently supports only submatrix same partitioning as 3107eba5e9cSLois Curfman McInnes original matrix! */ 311ca3fa75bSLois Curfman McInnes 3129566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &nlrows, &nlcols)); 3139566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRange(A, &rstart, &rend)); 314ca3fa75bSLois Curfman McInnes 315ca3fa75bSLois Curfman McInnes /* Check submatrix call */ 316ca3fa75bSLois Curfman McInnes if (scall == MAT_REUSE_MATRIX) { 317e32f2f54SBarry Smith /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */ 3187eba5e9cSLois Curfman McInnes /* Really need to test rows and column sizes! */ 319ca3fa75bSLois Curfman McInnes newmat = *B; 320ca3fa75bSLois Curfman McInnes } else { 321ca3fa75bSLois Curfman McInnes /* Create and fill new matrix */ 3229566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &newmat)); 3239566063dSJacob Faibussowitsch PetscCall(MatSetSizes(newmat, nrows, ncols, PETSC_DECIDE, Ncols)); 3249566063dSJacob Faibussowitsch PetscCall(MatSetType(newmat, ((PetscObject)A)->type_name)); 3259566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(newmat, NULL)); 326ca3fa75bSLois Curfman McInnes } 327ca3fa75bSLois Curfman McInnes 328ca3fa75bSLois Curfman McInnes /* Now extract the data pointers and do the copy, column at a time */ 329ca3fa75bSLois Curfman McInnes newmatd = (Mat_MPIDense *)newmat->data; 3309566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(newmatd->A, &bv)); 3319566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mat->A, &v)); 3329566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mat->A, &lda)); 3334aa3045dSJed Brown for (i = 0; i < Ncols; i++) { 334637a0070SStefano Zampini const PetscScalar *av = v + lda * icol[i]; 335ad540459SPierre Jolivet for (j = 0; j < nrows; j++) *bv++ = av[irow[j] - rstart]; 336ca3fa75bSLois Curfman McInnes } 3379566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mat->A, &v)); 3389566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(newmatd->A, &bv)); 339ca3fa75bSLois Curfman McInnes 340ca3fa75bSLois Curfman McInnes /* Assemble the matrices so that the correct flags are set */ 3419566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(newmat, MAT_FINAL_ASSEMBLY)); 3429566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(newmat, MAT_FINAL_ASSEMBLY)); 343ca3fa75bSLois Curfman McInnes 344ca3fa75bSLois Curfman McInnes /* Free work space */ 3459566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &irow)); 3469566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol_local, &icol)); 3479566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iscol_local)); 348ca3fa75bSLois Curfman McInnes *B = newmat; 3493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 350ca3fa75bSLois Curfman McInnes } 351ca3fa75bSLois Curfman McInnes 35266976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A, PetscScalar **array) 353d71ae5a4SJacob Faibussowitsch { 35473a71a0fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 35573a71a0fSBarry Smith 3563a40ed3dSBarry Smith PetscFunctionBegin; 3579566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, array)); 3583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 359ff14e315SSatish Balay } 360ff14e315SSatish Balay 361f1e99121SPierre Jolivet static PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A, PetscScalar **array) 362d71ae5a4SJacob Faibussowitsch { 3638572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3648572280aSBarry Smith 3658572280aSBarry Smith PetscFunctionBegin; 366f1e99121SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)array)); 3673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3688572280aSBarry Smith } 3698572280aSBarry Smith 37066976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A, PetscScalar **array) 371d71ae5a4SJacob Faibussowitsch { 3726947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3736947451fSStefano Zampini 3746947451fSStefano Zampini PetscFunctionBegin; 3759566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, array)); 3763ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3776947451fSStefano Zampini } 3786947451fSStefano Zampini 37966976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat, MatAssemblyType mode) 380d71ae5a4SJacob Faibussowitsch { 38139ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 38213f74950SBarry Smith PetscInt nstash, reallocs; 3838965ea79SLois Curfman McInnes 3843a40ed3dSBarry Smith PetscFunctionBegin; 3853ba16761SJacob Faibussowitsch if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(PETSC_SUCCESS); 3868965ea79SLois Curfman McInnes 3879566063dSJacob Faibussowitsch PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); 3889566063dSJacob Faibussowitsch PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); 3899566063dSJacob Faibussowitsch PetscCall(PetscInfo(mdn->A, "Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n", nstash, reallocs)); 3903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3918965ea79SLois Curfman McInnes } 3928965ea79SLois Curfman McInnes 39366976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat, MatAssemblyType mode) 394d71ae5a4SJacob Faibussowitsch { 39539ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 39613f74950SBarry Smith PetscInt i, *row, *col, flg, j, rstart, ncols; 39713f74950SBarry Smith PetscMPIInt n; 39887828ca2SBarry Smith PetscScalar *val; 3998965ea79SLois Curfman McInnes 4003a40ed3dSBarry Smith PetscFunctionBegin; 401910cf402Sprj- if (!mdn->donotstash && !mat->nooffprocentries) { 4028965ea79SLois Curfman McInnes /* wait on receives */ 4037ef1d9bdSSatish Balay while (1) { 4049566063dSJacob Faibussowitsch PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); 4057ef1d9bdSSatish Balay if (!flg) break; 4068965ea79SLois Curfman McInnes 4077ef1d9bdSSatish Balay for (i = 0; i < n;) { 4087ef1d9bdSSatish Balay /* Now identify the consecutive vals belonging to the same row */ 4092205254eSKarl Rupp for (j = i, rstart = row[j]; j < n; j++) { 4102205254eSKarl Rupp if (row[j] != rstart) break; 4112205254eSKarl Rupp } 4127ef1d9bdSSatish Balay if (j < n) ncols = j - i; 4137ef1d9bdSSatish Balay else ncols = n - i; 4147ef1d9bdSSatish Balay /* Now assemble all these values with a single function call */ 4159566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(mat, 1, row + i, ncols, col + i, val + i, mat->insertmode)); 4167ef1d9bdSSatish Balay i = j; 4178965ea79SLois Curfman McInnes } 4187ef1d9bdSSatish Balay } 4199566063dSJacob Faibussowitsch PetscCall(MatStashScatterEnd_Private(&mat->stash)); 420910cf402Sprj- } 4218965ea79SLois Curfman McInnes 4229566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mdn->A, mode)); 4239566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mdn->A, mode)); 4243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4258965ea79SLois Curfman McInnes } 4268965ea79SLois Curfman McInnes 42766976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroEntries_MPIDense(Mat A) 428d71ae5a4SJacob Faibussowitsch { 42939ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 4303a40ed3dSBarry Smith 4313a40ed3dSBarry Smith PetscFunctionBegin; 4329566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(l->A)); 4333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4348965ea79SLois Curfman McInnes } 4358965ea79SLois Curfman McInnes 43666976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroRows_MPIDense(Mat A, PetscInt n, const PetscInt rows[], PetscScalar diag, Vec x, Vec b) 437d71ae5a4SJacob Faibussowitsch { 43839ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 439637a0070SStefano Zampini PetscInt i, len, *lrows; 440637a0070SStefano Zampini 441637a0070SStefano Zampini PetscFunctionBegin; 442637a0070SStefano Zampini /* get locally owned rows */ 4439566063dSJacob Faibussowitsch PetscCall(PetscLayoutMapLocal(A->rmap, n, rows, &len, &lrows, NULL)); 444dd8e379bSPierre Jolivet /* fix right-hand side if needed */ 445637a0070SStefano Zampini if (x && b) { 44697b48c8fSBarry Smith const PetscScalar *xx; 44797b48c8fSBarry Smith PetscScalar *bb; 4488965ea79SLois Curfman McInnes 4499566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(x, &xx)); 4509566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(b, &bb)); 451637a0070SStefano Zampini for (i = 0; i < len; ++i) bb[lrows[i]] = diag * xx[lrows[i]]; 4529566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(x, &xx)); 4539566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(b, &bb)); 45497b48c8fSBarry Smith } 4559566063dSJacob Faibussowitsch PetscCall(MatZeroRows(l->A, len, lrows, 0.0, NULL, NULL)); 456e2eb51b1SBarry Smith if (diag != 0.0) { 457637a0070SStefano Zampini Vec d; 458b9679d65SBarry Smith 4599566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A, NULL, &d)); 4609566063dSJacob Faibussowitsch PetscCall(VecSet(d, diag)); 4619566063dSJacob Faibussowitsch PetscCall(MatDiagonalSet(A, d, INSERT_VALUES)); 4629566063dSJacob Faibussowitsch PetscCall(VecDestroy(&d)); 463b9679d65SBarry Smith } 4649566063dSJacob Faibussowitsch PetscCall(PetscFree(lrows)); 4653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4668965ea79SLois Curfman McInnes } 4678965ea79SLois Curfman McInnes 4680be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat, Vec, Vec); 4690be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat, Vec, Vec, Vec); 4700be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat, Vec, Vec); 4710be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat, Vec, Vec, Vec); 4720be0d8bdSHansol Suh 473d016bddeSToby Isaac static PetscErrorCode MatMultColumnRange_MPIDense(Mat mat, Vec xx, Vec yy, PetscInt c_start, PetscInt c_end) 474d016bddeSToby Isaac { 475d016bddeSToby Isaac Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 476d016bddeSToby Isaac const PetscScalar *ax; 477d016bddeSToby Isaac PetscScalar *ay; 478d016bddeSToby Isaac PetscMemType axmtype, aymtype; 479d016bddeSToby Isaac 480d016bddeSToby Isaac PetscFunctionBegin; 481d016bddeSToby Isaac if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 482d016bddeSToby Isaac PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 483d016bddeSToby Isaac PetscCall(VecGetArrayWriteAndMemType(mdn->lvec, &ay, &aymtype)); 484d016bddeSToby Isaac PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 485d016bddeSToby Isaac PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 486d016bddeSToby Isaac PetscCall(VecRestoreArrayWriteAndMemType(mdn->lvec, &ay)); 487d016bddeSToby Isaac PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 488d016bddeSToby Isaac PetscUseMethod(mdn->A, "MatMultColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (mdn->A, mdn->lvec, yy, c_start, c_end)); 489d016bddeSToby Isaac PetscFunctionReturn(PETSC_SUCCESS); 490d016bddeSToby Isaac } 491d016bddeSToby Isaac 49266976f2fSJacob Faibussowitsch static PetscErrorCode MatMult_MPIDense(Mat mat, Vec xx, Vec yy) 493d71ae5a4SJacob Faibussowitsch { 49439ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 495637a0070SStefano Zampini const PetscScalar *ax; 496637a0070SStefano Zampini PetscScalar *ay; 497d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 498c456f294SBarry Smith 4993a40ed3dSBarry Smith PetscFunctionBegin; 5006f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5019566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 502d016bddeSToby Isaac PetscCall(VecGetArrayWriteAndMemType(mdn->lvec, &ay, &aymtype)); 5039566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5049566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 505d016bddeSToby Isaac PetscCall(VecRestoreArrayWriteAndMemType(mdn->lvec, &ay)); 5069566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5079566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->mult)(mdn->A, mdn->lvec, yy)); 5083ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5098965ea79SLois Curfman McInnes } 5108965ea79SLois Curfman McInnes 5110be0d8bdSHansol Suh static PetscErrorCode MatMultAddColumnRange_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz, PetscInt c_start, PetscInt c_end) 5120be0d8bdSHansol Suh { 5130be0d8bdSHansol Suh Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 5140be0d8bdSHansol Suh const PetscScalar *ax; 5150be0d8bdSHansol Suh PetscScalar *ay; 5160be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 5170be0d8bdSHansol Suh 5180be0d8bdSHansol Suh PetscFunctionBegin; 5190be0d8bdSHansol Suh if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5200be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 5210be0d8bdSHansol Suh PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 5220be0d8bdSHansol Suh PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5230be0d8bdSHansol Suh PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 5240be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 5250be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5260be0d8bdSHansol Suh PetscUseMethod(mdn->A, "MatMultAddColumnRange_C", (Mat, Vec, Vec, Vec, PetscInt, PetscInt), (mdn->A, mdn->lvec, yy, zz, c_start, c_end)); 5270be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 5280be0d8bdSHansol Suh } 5290be0d8bdSHansol Suh 53066976f2fSJacob Faibussowitsch static PetscErrorCode MatMultAdd_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz) 531d71ae5a4SJacob Faibussowitsch { 53239ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 533637a0070SStefano Zampini const PetscScalar *ax; 534637a0070SStefano Zampini PetscScalar *ay; 535d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 536c456f294SBarry Smith 5373a40ed3dSBarry Smith PetscFunctionBegin; 5386f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5399566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 5409566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 5419566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5429566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 5439566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 5449566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5459566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->multadd)(mdn->A, mdn->lvec, yy, zz)); 5463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5478965ea79SLois Curfman McInnes } 5488965ea79SLois Curfman McInnes 5490be0d8bdSHansol Suh static PetscErrorCode MatMultHermitianTransposeColumnRange_MPIDense(Mat A, Vec xx, Vec yy, PetscInt c_start, PetscInt c_end) 5500be0d8bdSHansol Suh { 5510be0d8bdSHansol Suh Mat_MPIDense *a = (Mat_MPIDense *)A->data; 5520be0d8bdSHansol Suh const PetscScalar *ax; 5530be0d8bdSHansol Suh PetscScalar *ay; 5540be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 555d016bddeSToby Isaac PetscInt r_start, r_end; 556d016bddeSToby Isaac PetscInt c_start_local, c_end_local; 5570be0d8bdSHansol Suh 5580be0d8bdSHansol Suh PetscFunctionBegin; 5590be0d8bdSHansol Suh if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 560d016bddeSToby Isaac PetscCall(VecZeroEntries(a->lvec)); 561d016bddeSToby Isaac PetscCall(VecGetOwnershipRange(yy, &r_start, &r_end)); 562d016bddeSToby Isaac c_start_local = PetscMax(c_start, r_start); 563d016bddeSToby Isaac c_end_local = PetscMin(c_end, r_end); 564d016bddeSToby Isaac PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 565d016bddeSToby Isaac if (c_end_local > c_start_local) { 566d016bddeSToby Isaac if (PetscMemTypeHost(aymtype)) { 567d016bddeSToby Isaac PetscCall(PetscArrayzero(&ay[c_start_local], (size_t)(c_end_local - c_start_local))); 568d016bddeSToby Isaac } else { 569d016bddeSToby Isaac PetscCall(PetscDeviceRegisterMemory(ay, aymtype, sizeof(*ay) * ((size_t)(r_end - r_start)))); 570d016bddeSToby Isaac PetscCall(PetscDeviceArrayZero(NULL, &ay[c_start_local], (size_t)(c_end_local - c_start_local))); 571d016bddeSToby Isaac } 572d016bddeSToby Isaac } 5730be0d8bdSHansol Suh PetscUseMethod(a->A, "MatMultHermitianTransposeColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (a->A, xx, a->lvec, c_start, c_end)); 5740be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5750be0d8bdSHansol Suh PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5760be0d8bdSHansol Suh PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5770be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5780be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 5790be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 5800be0d8bdSHansol Suh } 5810be0d8bdSHansol Suh 582459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeKernel_MPIDense(Mat A, Vec xx, Vec yy, PetscBool herm) 583d71ae5a4SJacob Faibussowitsch { 584096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 585637a0070SStefano Zampini const PetscScalar *ax; 586637a0070SStefano Zampini PetscScalar *ay; 587d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 5884d86920dSPierre Jolivet 5893a40ed3dSBarry Smith PetscFunctionBegin; 5906f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 5919566063dSJacob Faibussowitsch PetscCall(VecSet(yy, 0.0)); 592459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 593459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 5949566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5959566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 5969566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5979566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5989566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5999566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 6003ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 601096963f5SLois Curfman McInnes } 602096963f5SLois Curfman McInnes 6030be0d8bdSHansol Suh static PetscErrorCode MatMultHermitianTransposeAddColumnRange_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscInt c_start, PetscInt c_end) 6040be0d8bdSHansol Suh { 6050be0d8bdSHansol Suh Mat_MPIDense *a = (Mat_MPIDense *)A->data; 6060be0d8bdSHansol Suh const PetscScalar *ax; 6070be0d8bdSHansol Suh PetscScalar *ay; 6080be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 6090be0d8bdSHansol Suh 6100be0d8bdSHansol Suh PetscFunctionBegin; 6110be0d8bdSHansol Suh if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 6120be0d8bdSHansol Suh PetscCall(VecCopy(yy, zz)); 613d016bddeSToby Isaac PetscCall(VecZeroEntries(a->lvec)); 6140be0d8bdSHansol Suh PetscUseMethod(a->A, "MatMultHermitianTransposeColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (a->A, xx, a->lvec, c_start, c_end)); 6150be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 6160be0d8bdSHansol Suh PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 6170be0d8bdSHansol Suh PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 6180be0d8bdSHansol Suh PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 6190be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 6200be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 6210be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 6220be0d8bdSHansol Suh } 6230be0d8bdSHansol Suh 624459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAddKernel_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscBool herm) 625d71ae5a4SJacob Faibussowitsch { 626096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 627637a0070SStefano Zampini const PetscScalar *ax; 628637a0070SStefano Zampini PetscScalar *ay; 629d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 630096963f5SLois Curfman McInnes 6313a40ed3dSBarry Smith PetscFunctionBegin; 6326f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 6339566063dSJacob Faibussowitsch PetscCall(VecCopy(yy, zz)); 634459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 635459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 6369566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 6379566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 6389566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 6399566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 6409566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 6419566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 6423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 643096963f5SLois Curfman McInnes } 644096963f5SLois Curfman McInnes 645459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTranspose_MPIDense(Mat A, Vec xx, Vec yy) 646459e8d23SBlanca Mellado Pinto { 647459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 648459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_FALSE)); 649459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 650459e8d23SBlanca Mellado Pinto } 651459e8d23SBlanca Mellado Pinto 652459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 653459e8d23SBlanca Mellado Pinto { 654459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 655459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_FALSE)); 656459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 657459e8d23SBlanca Mellado Pinto } 658459e8d23SBlanca Mellado Pinto 659459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTranspose_MPIDense(Mat A, Vec xx, Vec yy) 660459e8d23SBlanca Mellado Pinto { 661459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 662459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_TRUE)); 663459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 664459e8d23SBlanca Mellado Pinto } 665459e8d23SBlanca Mellado Pinto 666459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 667459e8d23SBlanca Mellado Pinto { 668459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 669459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_TRUE)); 670459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 671459e8d23SBlanca Mellado Pinto } 672459e8d23SBlanca Mellado Pinto 673d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetDiagonal_MPIDense(Mat A, Vec v) 674d71ae5a4SJacob Faibussowitsch { 67539ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 67679560b15SJacob Faibussowitsch PetscInt lda, len, i, nl, ng, m = A->rmap->n, radd; 67779560b15SJacob Faibussowitsch PetscScalar *x; 678637a0070SStefano Zampini const PetscScalar *av; 679ed3cc1f0SBarry Smith 6803a40ed3dSBarry Smith PetscFunctionBegin; 6819566063dSJacob Faibussowitsch PetscCall(VecGetArray(v, &x)); 68279560b15SJacob Faibussowitsch PetscCall(VecGetSize(v, &ng)); 68379560b15SJacob Faibussowitsch PetscCheck(ng == A->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming mat and vec"); 68479560b15SJacob Faibussowitsch PetscCall(VecGetLocalSize(v, &nl)); 685d0f46423SBarry Smith len = PetscMin(a->A->rmap->n, a->A->cmap->n); 686d0f46423SBarry Smith radd = A->rmap->rstart * m; 6879566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 6889566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 689ad540459SPierre Jolivet for (i = 0; i < len; i++) x[i] = av[radd + i * lda + i]; 6909566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 6910be0d8bdSHansol Suh if (nl - i > 0) PetscCall(PetscArrayzero(x + i, nl - i)); 6929566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(v, &x)); 6933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6948965ea79SLois Curfman McInnes } 6958965ea79SLois Curfman McInnes 69666976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MPIDense(Mat mat) 697d71ae5a4SJacob Faibussowitsch { 6983501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 699ed3cc1f0SBarry Smith 7003a40ed3dSBarry Smith PetscFunctionBegin; 7013ba16761SJacob Faibussowitsch PetscCall(PetscLogObjectState((PetscObject)mat, "Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT, mat->rmap->N, mat->cmap->N)); 7029566063dSJacob Faibussowitsch PetscCall(MatStashDestroy_Private(&mat->stash)); 70328b400f6SJacob Faibussowitsch PetscCheck(!mdn->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 70428b400f6SJacob Faibussowitsch PetscCheck(!mdn->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 7059566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->A)); 7069566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->lvec)); 7079566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&mdn->Mvctx)); 7089566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->cvec)); 7099566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->cmat)); 71001b82886SBarry Smith 7119566063dSJacob Faibussowitsch PetscCall(PetscFree(mat->data)); 7129566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, NULL)); 7138baccfbdSHong Zhang 7149566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", NULL)); 7159566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", NULL)); 7169566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", NULL)); 7179566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", NULL)); 7189566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", NULL)); 7199566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", NULL)); 7209566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", NULL)); 7219566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", NULL)); 7229566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", NULL)); 7239566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", NULL)); 7249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", NULL)); 7259566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", NULL)); 7269566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", NULL)); 7278baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 7289566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", NULL)); 7298baccfbdSHong Zhang #endif 730d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 7319566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", NULL)); 732d24d4204SJose E. Roman #endif 7339566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", NULL)); 7349566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", NULL)); 7359566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", NULL)); 7366718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 7379566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", NULL)); 7389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", NULL)); 7392e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", NULL)); 7402e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensecuda_mpidense_C", NULL)); 7412e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL)); 7422e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL)); 7432e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL)); 7442e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL)); 7452e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArray_C", NULL)); 7462e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayRead_C", NULL)); 7472e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayWrite_C", NULL)); 7482e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArray_C", NULL)); 7492e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayRead_C", NULL)); 7502e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayWrite_C", NULL)); 7512e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAPlaceArray_C", NULL)); 7522e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAResetArray_C", NULL)); 7532e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAReplaceArray_C", NULL)); 7543d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDASetPreallocation_C", NULL)); 7556718818eSStefano Zampini #endif 75647d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 75747d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", NULL)); 75847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", NULL)); 75947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", NULL)); 76047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensehip_mpidense_C", NULL)); 76147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensehip_C", NULL)); 76247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidensehip_C", NULL)); 76347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaij_C", NULL)); 76447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaijhipsparse_C", NULL)); 76547d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArray_C", NULL)); 76647d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayRead_C", NULL)); 76747d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayWrite_C", NULL)); 76847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArray_C", NULL)); 76947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayRead_C", NULL)); 77047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayWrite_C", NULL)); 77147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPPlaceArray_C", NULL)); 77247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPResetArray_C", NULL)); 77347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPReplaceArray_C", NULL)); 7743d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPSetPreallocation_C", NULL)); 77547d993e7Ssuyashtn #endif 7769566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", NULL)); 7779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", NULL)); 7789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", NULL)); 7799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", NULL)); 7809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", NULL)); 7819566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", NULL)); 7829566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", NULL)); 7839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", NULL)); 7849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", NULL)); 7859566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", NULL)); 786d016bddeSToby Isaac PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultColumnRange_C", NULL)); 7870be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultAddColumnRange_C", NULL)); 7880be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeColumnRange_C", NULL)); 7890be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeAddColumnRange_C", NULL)); 790f8103e6bSStefano Zampini 791f8103e6bSStefano Zampini PetscCall(PetscObjectCompose((PetscObject)mat, "DiagonalBlock", NULL)); 7923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7938965ea79SLois Curfman McInnes } 79439ddd567SLois Curfman McInnes 7959804daf3SBarry Smith #include <petscdraw.h> 796d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat, PetscViewer viewer) 797d71ae5a4SJacob Faibussowitsch { 79839ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 799616b8fbbSStefano Zampini PetscMPIInt rank; 80019fd82e9SBarry Smith PetscViewerType vtype; 8019f196a02SMartin Diehl PetscBool isascii, isdraw; 802b0a32e0cSBarry Smith PetscViewer sviewer; 803f3ef73ceSBarry Smith PetscViewerFormat format; 8048965ea79SLois Curfman McInnes 8053a40ed3dSBarry Smith PetscFunctionBegin; 8069566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat), &rank)); 8079f196a02SMartin Diehl PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isascii)); 8089566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 8099f196a02SMartin Diehl if (isascii) { 8109566063dSJacob Faibussowitsch PetscCall(PetscViewerGetType(viewer, &vtype)); 8119566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 812456192e2SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 8134e220ebcSLois Curfman McInnes MatInfo info; 8149566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mat, MAT_LOCAL, &info)); 8159566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 8169371c9d4SSatish Balay PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, " [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n", rank, mat->rmap->n, (PetscInt)info.nz_used, (PetscInt)info.nz_allocated, 8179371c9d4SSatish Balay (PetscInt)info.memory)); 8189566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 8199566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 8206f08ad05SPierre Jolivet if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx, viewer)); 8213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 822fb9695e5SSatish Balay } else if (format == PETSC_VIEWER_ASCII_INFO) { 8233ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8248965ea79SLois Curfman McInnes } 825f1af5d2fSBarry Smith } else if (isdraw) { 826b0a32e0cSBarry Smith PetscDraw draw; 827ace3abfcSBarry Smith PetscBool isnull; 828f1af5d2fSBarry Smith 8299566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw)); 8309566063dSJacob Faibussowitsch PetscCall(PetscDrawIsNull(draw, &isnull)); 8313ba16761SJacob Faibussowitsch if (isnull) PetscFunctionReturn(PETSC_SUCCESS); 832f1af5d2fSBarry Smith } 83377ed5343SBarry Smith 8347da1fb6eSBarry Smith { 8358965ea79SLois Curfman McInnes /* assemble the entire matrix onto first processor. */ 8368965ea79SLois Curfman McInnes Mat A; 837d0f46423SBarry Smith PetscInt M = mat->rmap->N, N = mat->cmap->N, m, row, i, nz; 838ba8c8a56SBarry Smith PetscInt *cols; 839ba8c8a56SBarry Smith PetscScalar *vals; 8408965ea79SLois Curfman McInnes 8419566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &A)); 842dd400576SPatrick Sanan if (rank == 0) { 8439566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, M, N, M, N)); 8443a40ed3dSBarry Smith } else { 8459566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, 0, 0, M, N)); 8468965ea79SLois Curfman McInnes } 8477adad957SLisandro Dalcin /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */ 8489566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATMPIDENSE)); 8499566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 8508965ea79SLois Curfman McInnes 85139ddd567SLois Curfman McInnes /* Copy the matrix ... This isn't the most efficient means, 85239ddd567SLois Curfman McInnes but it's quick for now */ 85351022da4SBarry Smith A->insertmode = INSERT_VALUES; 8542205254eSKarl Rupp 8552205254eSKarl Rupp row = mat->rmap->rstart; 8562205254eSKarl Rupp m = mdn->A->rmap->n; 8578965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 8589566063dSJacob Faibussowitsch PetscCall(MatGetRow_MPIDense(mat, row, &nz, &cols, &vals)); 8599566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(A, 1, &row, nz, cols, vals, INSERT_VALUES)); 8609566063dSJacob Faibussowitsch PetscCall(MatRestoreRow_MPIDense(mat, row, &nz, &cols, &vals)); 86139ddd567SLois Curfman McInnes row++; 8628965ea79SLois Curfman McInnes } 8638965ea79SLois Curfman McInnes 8649566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 8659566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 8669566063dSJacob Faibussowitsch PetscCall(PetscViewerGetSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 867dd400576SPatrick Sanan if (rank == 0) { 868f4f49eeaSPierre Jolivet PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense *)A->data)->A, ((PetscObject)mat)->name)); 869f4f49eeaSPierre Jolivet PetscCall(MatView_SeqDense(((Mat_MPIDense *)A->data)->A, sviewer)); 8708965ea79SLois Curfman McInnes } 8719566063dSJacob Faibussowitsch PetscCall(PetscViewerRestoreSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 8729566063dSJacob Faibussowitsch PetscCall(MatDestroy(&A)); 8738965ea79SLois Curfman McInnes } 8743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8758965ea79SLois Curfman McInnes } 8768965ea79SLois Curfman McInnes 87766976f2fSJacob Faibussowitsch static PetscErrorCode MatView_MPIDense(Mat mat, PetscViewer viewer) 878d71ae5a4SJacob Faibussowitsch { 8799f196a02SMartin Diehl PetscBool isascii, isbinary, isdraw, issocket; 8808965ea79SLois Curfman McInnes 881433994e6SBarry Smith PetscFunctionBegin; 8829f196a02SMartin Diehl PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isascii)); 8839566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 8849566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSOCKET, &issocket)); 8859566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 8860f5bd95cSBarry Smith 887ac530a7eSPierre Jolivet if (isascii || issocket || isdraw) PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat, viewer)); 888ac530a7eSPierre Jolivet else if (isbinary) PetscCall(MatView_Dense_Binary(mat, viewer)); 8893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8908965ea79SLois Curfman McInnes } 8918965ea79SLois Curfman McInnes 89266976f2fSJacob Faibussowitsch static PetscErrorCode MatGetInfo_MPIDense(Mat A, MatInfoType flag, MatInfo *info) 893d71ae5a4SJacob Faibussowitsch { 8943501a2bdSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 8953501a2bdSLois Curfman McInnes Mat mdn = mat->A; 8963966268fSBarry Smith PetscLogDouble isend[5], irecv[5]; 8978965ea79SLois Curfman McInnes 8983a40ed3dSBarry Smith PetscFunctionBegin; 8994e220ebcSLois Curfman McInnes info->block_size = 1.0; 9002205254eSKarl Rupp 9019566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mdn, MAT_LOCAL, info)); 9022205254eSKarl Rupp 9039371c9d4SSatish Balay isend[0] = info->nz_used; 9049371c9d4SSatish Balay isend[1] = info->nz_allocated; 9059371c9d4SSatish Balay isend[2] = info->nz_unneeded; 9069371c9d4SSatish Balay isend[3] = info->memory; 9079371c9d4SSatish Balay isend[4] = info->mallocs; 9088965ea79SLois Curfman McInnes if (flag == MAT_LOCAL) { 9094e220ebcSLois Curfman McInnes info->nz_used = isend[0]; 9104e220ebcSLois Curfman McInnes info->nz_allocated = isend[1]; 9114e220ebcSLois Curfman McInnes info->nz_unneeded = isend[2]; 9124e220ebcSLois Curfman McInnes info->memory = isend[3]; 9134e220ebcSLois Curfman McInnes info->mallocs = isend[4]; 9148965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_MAX) { 915462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_MAX, PetscObjectComm((PetscObject)A))); 9162205254eSKarl Rupp 9174e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 9184e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 9194e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 9204e220ebcSLois Curfman McInnes info->memory = irecv[3]; 9214e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 9228965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_SUM) { 923462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_SUM, PetscObjectComm((PetscObject)A))); 9242205254eSKarl Rupp 9254e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 9264e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 9274e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 9284e220ebcSLois Curfman McInnes info->memory = irecv[3]; 9294e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 9308965ea79SLois Curfman McInnes } 9314e220ebcSLois Curfman McInnes info->fill_ratio_given = 0; /* no parallel LU/ILU/Cholesky */ 9324e220ebcSLois Curfman McInnes info->fill_ratio_needed = 0; 9334e220ebcSLois Curfman McInnes info->factor_mallocs = 0; 9343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9358965ea79SLois Curfman McInnes } 9368965ea79SLois Curfman McInnes 93766976f2fSJacob Faibussowitsch static PetscErrorCode MatSetOption_MPIDense(Mat A, MatOption op, PetscBool flg) 938d71ae5a4SJacob Faibussowitsch { 93939ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 9408965ea79SLois Curfman McInnes 9413a40ed3dSBarry Smith PetscFunctionBegin; 94212c028f9SKris Buschelman switch (op) { 943512a5fc5SBarry Smith case MAT_NEW_NONZERO_LOCATIONS: 94412c028f9SKris Buschelman case MAT_NEW_NONZERO_LOCATION_ERR: 94512c028f9SKris Buschelman case MAT_NEW_NONZERO_ALLOCATION_ERR: 94643674050SBarry Smith MatCheckPreallocated(A, 1); 9479566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 94812c028f9SKris Buschelman break; 94912c028f9SKris Buschelman case MAT_ROW_ORIENTED: 95043674050SBarry Smith MatCheckPreallocated(A, 1); 9514e0d8c25SBarry Smith a->roworiented = flg; 9529566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 95312c028f9SKris Buschelman break; 954d71ae5a4SJacob Faibussowitsch case MAT_IGNORE_OFF_PROC_ENTRIES: 955d71ae5a4SJacob Faibussowitsch a->donotstash = flg; 956d71ae5a4SJacob Faibussowitsch break; 95777e54ba9SKris Buschelman case MAT_SYMMETRIC: 95877e54ba9SKris Buschelman case MAT_STRUCTURALLY_SYMMETRIC: 9599a4540c5SBarry Smith case MAT_HERMITIAN: 9609a4540c5SBarry Smith case MAT_SYMMETRY_ETERNAL: 961b94d7dedSBarry Smith case MAT_STRUCTURAL_SYMMETRY_ETERNAL: 962b94d7dedSBarry Smith case MAT_SPD: 963b94d7dedSBarry Smith case MAT_SPD_ETERNAL: 964b94d7dedSBarry Smith /* if the diagonal matrix is square it inherits some of the properties above */ 9659725ddffSPierre Jolivet if (a->A && A->rmap->n == A->cmap->n) PetscCall(MatSetOption(a->A, op, flg)); 96677e54ba9SKris Buschelman break; 967d71ae5a4SJacob Faibussowitsch default: 968888c827cSStefano Zampini break; 9693a40ed3dSBarry Smith } 9703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9718965ea79SLois Curfman McInnes } 9728965ea79SLois Curfman McInnes 97366976f2fSJacob Faibussowitsch static PetscErrorCode MatDiagonalScale_MPIDense(Mat A, Vec ll, Vec rr) 974d71ae5a4SJacob Faibussowitsch { 9755b2fa520SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 976637a0070SStefano Zampini const PetscScalar *l; 977637a0070SStefano Zampini PetscScalar x, *v, *vv, *r; 978637a0070SStefano Zampini PetscInt i, j, s2a, s3a, s2, s3, m = mdn->A->rmap->n, n = mdn->A->cmap->n, lda; 9795b2fa520SLois Curfman McInnes 9805b2fa520SLois Curfman McInnes PetscFunctionBegin; 9819566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(mdn->A, &vv)); 9829566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mdn->A, &lda)); 9839566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &s2, &s3)); 9845b2fa520SLois Curfman McInnes if (ll) { 9859566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(ll, &s2a)); 98608401ef6SPierre Jolivet PetscCheck(s2a == s2, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2); 9879566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(ll, &l)); 9885b2fa520SLois Curfman McInnes for (i = 0; i < m; i++) { 9895b2fa520SLois Curfman McInnes x = l[i]; 990637a0070SStefano Zampini v = vv + i; 9919371c9d4SSatish Balay for (j = 0; j < n; j++) { 9929371c9d4SSatish Balay (*v) *= x; 9939371c9d4SSatish Balay v += lda; 9949371c9d4SSatish Balay } 9955b2fa520SLois Curfman McInnes } 9969566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(ll, &l)); 9979566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 9985b2fa520SLois Curfman McInnes } 9995b2fa520SLois Curfman McInnes if (rr) { 1000637a0070SStefano Zampini const PetscScalar *ar; 1001637a0070SStefano Zampini 10029566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(rr, &s3a)); 100308401ef6SPierre Jolivet PetscCheck(s3a == s3, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3); 10049566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(rr, &ar)); 10056f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 10069566063dSJacob Faibussowitsch PetscCall(VecGetArray(mdn->lvec, &r)); 10079566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 10089566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 10099566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(rr, &ar)); 10105b2fa520SLois Curfman McInnes for (i = 0; i < n; i++) { 10115b2fa520SLois Curfman McInnes x = r[i]; 1012637a0070SStefano Zampini v = vv + i * lda; 10132205254eSKarl Rupp for (j = 0; j < m; j++) (*v++) *= x; 10145b2fa520SLois Curfman McInnes } 10159566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(mdn->lvec, &r)); 10169566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 10175b2fa520SLois Curfman McInnes } 10189566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(mdn->A, &vv)); 10193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10205b2fa520SLois Curfman McInnes } 10215b2fa520SLois Curfman McInnes 102266976f2fSJacob Faibussowitsch static PetscErrorCode MatNorm_MPIDense(Mat A, NormType type, PetscReal *nrm) 1023d71ae5a4SJacob Faibussowitsch { 10243501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 102513f74950SBarry Smith PetscInt i, j; 1026e91c04dfSPierre Jolivet PetscMPIInt size; 1027329f5518SBarry Smith PetscReal sum = 0.0; 1028637a0070SStefano Zampini const PetscScalar *av, *v; 10293501a2bdSLois Curfman McInnes 10303a40ed3dSBarry Smith PetscFunctionBegin; 10319566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, &av)); 1032637a0070SStefano Zampini v = av; 10339566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1034616b8fbbSStefano Zampini if (size == 1) { 10359566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, nrm)); 10363501a2bdSLois Curfman McInnes } else { 10373501a2bdSLois Curfman McInnes if (type == NORM_FROBENIUS) { 1038d0f46423SBarry Smith for (i = 0; i < mdn->A->cmap->n * mdn->A->rmap->n; i++) { 10399371c9d4SSatish Balay sum += PetscRealPart(PetscConj(*v) * (*v)); 10409371c9d4SSatish Balay v++; 10413501a2bdSLois Curfman McInnes } 1042462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(&sum, nrm, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 10438f1a2a5eSBarry Smith *nrm = PetscSqrtReal(*nrm); 10449566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * mdn->A->cmap->n * mdn->A->rmap->n)); 10453a40ed3dSBarry Smith } else if (type == NORM_1) { 1046e91c04dfSPierre Jolivet PetscReal *tmp; 1047e91c04dfSPierre Jolivet 1048e91c04dfSPierre Jolivet PetscCall(PetscCalloc1(A->cmap->N, &tmp)); 1049064f8208SBarry Smith *nrm = 0.0; 1050637a0070SStefano Zampini v = av; 1051d0f46423SBarry Smith for (j = 0; j < mdn->A->cmap->n; j++) { 1052d0f46423SBarry Smith for (i = 0; i < mdn->A->rmap->n; i++) { 10539371c9d4SSatish Balay tmp[j] += PetscAbsScalar(*v); 10549371c9d4SSatish Balay v++; 10553501a2bdSLois Curfman McInnes } 10563501a2bdSLois Curfman McInnes } 1057e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, tmp, A->cmap->N, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 1058d0f46423SBarry Smith for (j = 0; j < A->cmap->N; j++) { 1059e91c04dfSPierre Jolivet if (tmp[j] > *nrm) *nrm = tmp[j]; 10603501a2bdSLois Curfman McInnes } 1061e91c04dfSPierre Jolivet PetscCall(PetscFree(tmp)); 10629566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(A->cmap->n * A->rmap->n)); 10633a40ed3dSBarry Smith } else if (type == NORM_INFINITY) { /* max row norm */ 1064e91c04dfSPierre Jolivet PetscCall(MatNorm(mdn->A, type, nrm)); 1065e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, nrm, 1, MPIU_REAL, MPIU_MAX, PetscObjectComm((PetscObject)A))); 1066ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for two norm"); 10673501a2bdSLois Curfman McInnes } 10689566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, &av)); 10693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10703501a2bdSLois Curfman McInnes } 10713501a2bdSLois Curfman McInnes 107266976f2fSJacob Faibussowitsch static PetscErrorCode MatTranspose_MPIDense(Mat A, MatReuse reuse, Mat *matout) 1073d71ae5a4SJacob Faibussowitsch { 10743501a2bdSLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10753501a2bdSLois Curfman McInnes Mat B; 1076d0f46423SBarry Smith PetscInt M = A->rmap->N, N = A->cmap->N, m, n, *rwork, rstart = A->rmap->rstart; 1077637a0070SStefano Zampini PetscInt j, i, lda; 107887828ca2SBarry Smith PetscScalar *v; 10793501a2bdSLois Curfman McInnes 10803a40ed3dSBarry Smith PetscFunctionBegin; 10817fb60732SBarry Smith if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *matout)); 1082cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { 10839566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 10849566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->cmap->n, A->rmap->n, N, M)); 10859566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)A)->type_name)); 10869566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(B, NULL)); 1087637a0070SStefano Zampini } else B = *matout; 10883501a2bdSLois Curfman McInnes 10899371c9d4SSatish Balay m = a->A->rmap->n; 10909371c9d4SSatish Balay n = a->A->cmap->n; 10919566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)&v)); 10929566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 10939566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &rwork)); 10943501a2bdSLois Curfman McInnes for (i = 0; i < m; i++) rwork[i] = rstart + i; 10951acff37aSSatish Balay for (j = 0; j < n; j++) { 10969566063dSJacob Faibussowitsch PetscCall(MatSetValues(B, 1, &j, m, rwork, v, INSERT_VALUES)); 10978e3a54c0SPierre Jolivet v = PetscSafePointerPlusOffset(v, lda); 10983501a2bdSLois Curfman McInnes } 10999566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)&v)); 11009566063dSJacob Faibussowitsch PetscCall(PetscFree(rwork)); 11019566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 11029566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 1103cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) { 11043501a2bdSLois Curfman McInnes *matout = B; 11053501a2bdSLois Curfman McInnes } else { 11069566063dSJacob Faibussowitsch PetscCall(MatHeaderMerge(A, &B)); 11073501a2bdSLois Curfman McInnes } 11083ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1109096963f5SLois Curfman McInnes } 1110096963f5SLois Curfman McInnes 11116849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat, MatDuplicateOption, Mat *); 111252c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat, PetscScalar); 11138965ea79SLois Curfman McInnes 111466976f2fSJacob Faibussowitsch static PetscErrorCode MatSetUp_MPIDense(Mat A) 1115d71ae5a4SJacob Faibussowitsch { 1116273d9f13SBarry Smith PetscFunctionBegin; 11179566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 11189566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 111948a46eb9SPierre Jolivet if (!A->preallocated) PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 11203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1121273d9f13SBarry Smith } 1122273d9f13SBarry Smith 112366976f2fSJacob Faibussowitsch static PetscErrorCode MatAXPY_MPIDense(Mat Y, PetscScalar alpha, Mat X, MatStructure str) 1124d71ae5a4SJacob Faibussowitsch { 1125488007eeSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)Y->data, *B = (Mat_MPIDense *)X->data; 1126488007eeSBarry Smith 1127488007eeSBarry Smith PetscFunctionBegin; 11289566063dSJacob Faibussowitsch PetscCall(MatAXPY(A->A, alpha, B->A, str)); 11293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1130488007eeSBarry Smith } 1131488007eeSBarry Smith 113266976f2fSJacob Faibussowitsch static PetscErrorCode MatConjugate_MPIDense(Mat mat) 1133d71ae5a4SJacob Faibussowitsch { 1134ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 1135ba337c44SJed Brown 1136ba337c44SJed Brown PetscFunctionBegin; 11379566063dSJacob Faibussowitsch PetscCall(MatConjugate(a->A)); 11383ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1139ba337c44SJed Brown } 1140ba337c44SJed Brown 114166976f2fSJacob Faibussowitsch static PetscErrorCode MatRealPart_MPIDense(Mat A) 1142d71ae5a4SJacob Faibussowitsch { 1143ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1144ba337c44SJed Brown 1145ba337c44SJed Brown PetscFunctionBegin; 11469566063dSJacob Faibussowitsch PetscCall(MatRealPart(a->A)); 11473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1148ba337c44SJed Brown } 1149ba337c44SJed Brown 115066976f2fSJacob Faibussowitsch static PetscErrorCode MatImaginaryPart_MPIDense(Mat A) 1151d71ae5a4SJacob Faibussowitsch { 1152ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1153ba337c44SJed Brown 1154ba337c44SJed Brown PetscFunctionBegin; 11559566063dSJacob Faibussowitsch PetscCall(MatImaginaryPart(a->A)); 11563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1157ba337c44SJed Brown } 1158ba337c44SJed Brown 1159d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetColumnVector_MPIDense(Mat A, Vec v, PetscInt col) 1160d71ae5a4SJacob Faibussowitsch { 1161637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 116249a6ff4bSBarry Smith 116349a6ff4bSBarry Smith PetscFunctionBegin; 116428b400f6SJacob Faibussowitsch PetscCheck(a->A, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing local matrix"); 116528b400f6SJacob Faibussowitsch PetscCheck(a->A->ops->getcolumnvector, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing get column operation"); 11669566063dSJacob Faibussowitsch PetscCall((*a->A->ops->getcolumnvector)(a->A, v, col)); 11673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 116849a6ff4bSBarry Smith } 116949a6ff4bSBarry Smith 1170857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat, PetscInt, PetscReal *); 117152c5f739Sprj- 117266976f2fSJacob Faibussowitsch static PetscErrorCode MatGetColumnReductions_MPIDense(Mat A, PetscInt type, PetscReal *reductions) 1173d71ae5a4SJacob Faibussowitsch { 1174a873a8cdSSam Reynolds PetscInt i, m, n; 11750716a85fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 11760716a85fSBarry Smith 11770716a85fSBarry Smith PetscFunctionBegin; 11789566063dSJacob Faibussowitsch PetscCall(MatGetSize(A, &m, &n)); 1179857cbf51SRichard Tran Mills if (type == REDUCTION_MEAN_REALPART) { 1180e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_REALPART, reductions)); 1181857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_IMAGINARYPART) { 1182e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_IMAGINARYPART, reductions)); 1183a873a8cdSSam Reynolds } else { 1184e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, type, reductions)); 1185a873a8cdSSam Reynolds } 1186857cbf51SRichard Tran Mills if (type == NORM_2) { 1187e91c04dfSPierre Jolivet for (i = 0; i < n; i++) reductions[i] *= reductions[i]; 11880716a85fSBarry Smith } 1189857cbf51SRichard Tran Mills if (type == NORM_INFINITY) { 1190e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, reductions, n, MPIU_REAL, MPIU_MAX, A->hdr.comm)); 11910716a85fSBarry Smith } else { 1192e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, reductions, n, MPIU_REAL, MPIU_SUM, A->hdr.comm)); 11930716a85fSBarry Smith } 1194857cbf51SRichard Tran Mills if (type == NORM_2) { 1195a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] = PetscSqrtReal(reductions[i]); 1196857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) { 1197a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] /= m; 11980716a85fSBarry Smith } 11993ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12000716a85fSBarry Smith } 12010716a85fSBarry Smith 1202d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetRandom_MPIDense(Mat x, PetscRandom rctx) 1203d71ae5a4SJacob Faibussowitsch { 120473a71a0fSBarry Smith Mat_MPIDense *d = (Mat_MPIDense *)x->data; 120573a71a0fSBarry Smith 120673a71a0fSBarry Smith PetscFunctionBegin; 12079566063dSJacob Faibussowitsch PetscCall(MatSetRandom(d->A, rctx)); 12083faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 12093faff063SStefano Zampini x->offloadmask = d->A->offloadmask; 12103faff063SStefano Zampini #endif 12113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 121273a71a0fSBarry Smith } 121373a71a0fSBarry Smith 1214d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A, PetscBool *missing, PetscInt *d) 1215d71ae5a4SJacob Faibussowitsch { 12163b49f96aSBarry Smith PetscFunctionBegin; 12173b49f96aSBarry Smith *missing = PETSC_FALSE; 12183ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12193b49f96aSBarry Smith } 12203b49f96aSBarry Smith 12214222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1222cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12236718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1224a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12256718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat, Mat, PetscBool *); 12266718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat, PetscViewer); 12275d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat); 1228cc48ffa7SToby Isaac 122909dc0095SBarry Smith static struct _MatOps MatOps_Values = {MatSetValues_MPIDense, 123009dc0095SBarry Smith MatGetRow_MPIDense, 123109dc0095SBarry Smith MatRestoreRow_MPIDense, 123209dc0095SBarry Smith MatMult_MPIDense, 123397304618SKris Buschelman /* 4*/ MatMultAdd_MPIDense, 12347c922b88SBarry Smith MatMultTranspose_MPIDense, 12357c922b88SBarry Smith MatMultTransposeAdd_MPIDense, 1236f4259b30SLisandro Dalcin NULL, 1237f4259b30SLisandro Dalcin NULL, 1238f4259b30SLisandro Dalcin NULL, 1239f4259b30SLisandro Dalcin /* 10*/ NULL, 1240f4259b30SLisandro Dalcin NULL, 1241f4259b30SLisandro Dalcin NULL, 1242f4259b30SLisandro Dalcin NULL, 124309dc0095SBarry Smith MatTranspose_MPIDense, 124497304618SKris Buschelman /* 15*/ MatGetInfo_MPIDense, 12456e4ee0c6SHong Zhang MatEqual_MPIDense, 124609dc0095SBarry Smith MatGetDiagonal_MPIDense, 12475b2fa520SLois Curfman McInnes MatDiagonalScale_MPIDense, 124809dc0095SBarry Smith MatNorm_MPIDense, 124997304618SKris Buschelman /* 20*/ MatAssemblyBegin_MPIDense, 125009dc0095SBarry Smith MatAssemblyEnd_MPIDense, 125109dc0095SBarry Smith MatSetOption_MPIDense, 125209dc0095SBarry Smith MatZeroEntries_MPIDense, 1253d519adbfSMatthew Knepley /* 24*/ MatZeroRows_MPIDense, 1254f4259b30SLisandro Dalcin NULL, 1255f4259b30SLisandro Dalcin NULL, 1256f4259b30SLisandro Dalcin NULL, 1257f4259b30SLisandro Dalcin NULL, 12584994cf47SJed Brown /* 29*/ MatSetUp_MPIDense, 1259f4259b30SLisandro Dalcin NULL, 1260f4259b30SLisandro Dalcin NULL, 1261c56a70eeSBarry Smith MatGetDiagonalBlock_MPIDense, 1262f4259b30SLisandro Dalcin NULL, 1263d519adbfSMatthew Knepley /* 34*/ MatDuplicate_MPIDense, 1264f4259b30SLisandro Dalcin NULL, 1265f4259b30SLisandro Dalcin NULL, 1266f4259b30SLisandro Dalcin NULL, 1267f4259b30SLisandro Dalcin NULL, 1268d519adbfSMatthew Knepley /* 39*/ MatAXPY_MPIDense, 12697dae84e0SHong Zhang MatCreateSubMatrices_MPIDense, 1270f4259b30SLisandro Dalcin NULL, 127109dc0095SBarry Smith MatGetValues_MPIDense, 1272a76f77c3SStefano Zampini MatCopy_MPIDense, 1273f4259b30SLisandro Dalcin /* 44*/ NULL, 127409dc0095SBarry Smith MatScale_MPIDense, 12752f605a99SJose E. Roman MatShift_MPIDense, 1276f4259b30SLisandro Dalcin NULL, 1277f4259b30SLisandro Dalcin NULL, 127873a71a0fSBarry Smith /* 49*/ MatSetRandom_MPIDense, 1279f4259b30SLisandro Dalcin NULL, 1280f4259b30SLisandro Dalcin NULL, 1281f4259b30SLisandro Dalcin NULL, 1282f4259b30SLisandro Dalcin NULL, 1283f4259b30SLisandro Dalcin /* 54*/ NULL, 1284f4259b30SLisandro Dalcin NULL, 1285f4259b30SLisandro Dalcin NULL, 1286f4259b30SLisandro Dalcin NULL, 1287f4259b30SLisandro Dalcin NULL, 12887dae84e0SHong Zhang /* 59*/ MatCreateSubMatrix_MPIDense, 1289b9b97703SBarry Smith MatDestroy_MPIDense, 1290b9b97703SBarry Smith MatView_MPIDense, 1291f4259b30SLisandro Dalcin NULL, 1292f4259b30SLisandro Dalcin NULL, 1293f4259b30SLisandro Dalcin /* 64*/ NULL, 1294f4259b30SLisandro Dalcin NULL, 1295f4259b30SLisandro Dalcin NULL, 1296f4259b30SLisandro Dalcin NULL, 1297f4259b30SLisandro Dalcin NULL, 1298f4259b30SLisandro Dalcin /* 69*/ NULL, 1299f4259b30SLisandro Dalcin NULL, 1300f4259b30SLisandro Dalcin NULL, 1301f4259b30SLisandro Dalcin NULL, 1302f4259b30SLisandro Dalcin NULL, 1303f4259b30SLisandro Dalcin /* 74*/ NULL, 1304f4259b30SLisandro Dalcin NULL, 1305f4259b30SLisandro Dalcin NULL, 1306f4259b30SLisandro Dalcin NULL, 13078bb0f5c6SPierre Jolivet MatLoad_MPIDense, 1308f4259b30SLisandro Dalcin /* 79*/ NULL, 1309f4259b30SLisandro Dalcin NULL, 1310f4259b30SLisandro Dalcin NULL, 1311f4259b30SLisandro Dalcin NULL, 13128bb0f5c6SPierre Jolivet /* 83*/ NULL, 1313f4259b30SLisandro Dalcin NULL, 1314f4259b30SLisandro Dalcin NULL, 1315f4259b30SLisandro Dalcin NULL, 13166718818eSStefano Zampini MatMatTransposeMultSymbolic_MPIDense_MPIDense, 1317cc48ffa7SToby Isaac MatMatTransposeMultNumeric_MPIDense_MPIDense, 13188bb0f5c6SPierre Jolivet /* 89*/ NULL, 13198bb0f5c6SPierre Jolivet MatProductSetFromOptions_MPIDense, 1320f4259b30SLisandro Dalcin NULL, 1321f4259b30SLisandro Dalcin NULL, 1322ba337c44SJed Brown MatConjugate_MPIDense, 13238bb0f5c6SPierre Jolivet /* 94*/ NULL, 1324f4259b30SLisandro Dalcin NULL, 1325ba337c44SJed Brown MatRealPart_MPIDense, 1326ba337c44SJed Brown MatImaginaryPart_MPIDense, 1327f4259b30SLisandro Dalcin NULL, 13288bb0f5c6SPierre Jolivet /*99*/ NULL, 13298bb0f5c6SPierre Jolivet NULL, 13308bb0f5c6SPierre Jolivet NULL, 13318bb0f5c6SPierre Jolivet NULL, 13328bb0f5c6SPierre Jolivet MatGetColumnVector_MPIDense, 13338bb0f5c6SPierre Jolivet /*104*/ MatMissingDiagonal_MPIDense, 13348bb0f5c6SPierre Jolivet NULL, 13358bb0f5c6SPierre Jolivet NULL, 13368bb0f5c6SPierre Jolivet NULL, 1337f4259b30SLisandro Dalcin NULL, 1338f4259b30SLisandro Dalcin /*109*/ NULL, 1339f4259b30SLisandro Dalcin NULL, 1340f4259b30SLisandro Dalcin NULL, 1341459e8d23SBlanca Mellado Pinto MatMultHermitianTranspose_MPIDense, 1342459e8d23SBlanca Mellado Pinto MatMultHermitianTransposeAdd_MPIDense, 13438bb0f5c6SPierre Jolivet /*114*/ NULL, 13448bb0f5c6SPierre Jolivet NULL, 13458bb0f5c6SPierre Jolivet MatGetColumnReductions_MPIDense, 13468bb0f5c6SPierre Jolivet NULL, 13478bb0f5c6SPierre Jolivet NULL, 13488bb0f5c6SPierre Jolivet NULL, 13498bb0f5c6SPierre Jolivet /*120*/ NULL, 13508bb0f5c6SPierre Jolivet MatTransposeMatMultSymbolic_MPIDense_MPIDense, 13518bb0f5c6SPierre Jolivet MatTransposeMatMultNumeric_MPIDense_MPIDense, 1352f4259b30SLisandro Dalcin NULL, 1353f4259b30SLisandro Dalcin /*124*/ NULL, 13548bb0f5c6SPierre Jolivet NULL, 1355f4259b30SLisandro Dalcin NULL, 1356f4259b30SLisandro Dalcin NULL, 1357f4259b30SLisandro Dalcin NULL, 1358f4259b30SLisandro Dalcin /*129*/ NULL, 1359f4259b30SLisandro Dalcin NULL, 13608bb0f5c6SPierre Jolivet MatCreateMPIMatConcatenateSeqMat_MPIDense, 13618bb0f5c6SPierre Jolivet NULL, 1362f4259b30SLisandro Dalcin NULL, 1363f4259b30SLisandro Dalcin /*134*/ NULL, 1364f4259b30SLisandro Dalcin NULL, 1365f4259b30SLisandro Dalcin NULL, 1366f4259b30SLisandro Dalcin NULL, 1367f4259b30SLisandro Dalcin NULL, 1368f4259b30SLisandro Dalcin /*139*/ NULL, 1369f4259b30SLisandro Dalcin NULL, 1370f4259b30SLisandro Dalcin NULL, 137103db1824SAlex Lindsay NULL, 1372dec0b466SHong Zhang NULL}; 13738965ea79SLois Curfman McInnes 137466976f2fSJacob Faibussowitsch static PetscErrorCode MatMPIDenseSetPreallocation_MPIDense(Mat mat, PetscScalar *data) 1375d71ae5a4SJacob Faibussowitsch { 1376637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 137747d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 1378a23d5eceSKris Buschelman 1379a23d5eceSKris Buschelman PetscFunctionBegin; 138028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 13819566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->rmap)); 13829566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->cmap)); 1383637a0070SStefano Zampini if (!a->A) { 13849566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 13859566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, mat->rmap->n, mat->cmap->N, mat->rmap->n, mat->cmap->N)); 1386637a0070SStefano Zampini } 138747d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 138847d993e7Ssuyashtn PetscBool iscuda; 13899566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSECUDA, &iscuda)); 139047d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 139147d993e7Ssuyashtn #endif 139247d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 139347d993e7Ssuyashtn PetscBool iship; 139447d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSEHIP, &iship)); 139547d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 139647d993e7Ssuyashtn #endif 139747d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 13989566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(a->A, data)); 139947d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 14003faff063SStefano Zampini mat->offloadmask = a->A->offloadmask; 14013faff063SStefano Zampini #endif 1402637a0070SStefano Zampini mat->preallocated = PETSC_TRUE; 14036f08ad05SPierre Jolivet mat->assembled = PETSC_TRUE; 14043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1405a23d5eceSKris Buschelman } 1406a23d5eceSKris Buschelman 1407d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1408d71ae5a4SJacob Faibussowitsch { 14094e29119aSPierre Jolivet Mat B, C; 14104e29119aSPierre Jolivet 14114e29119aSPierre Jolivet PetscFunctionBegin; 14129566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMat(A, MAT_INITIAL_MATRIX, &C)); 14139566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqDense(C, MATSEQDENSE, MAT_INITIAL_MATRIX, &B)); 14149566063dSJacob Faibussowitsch PetscCall(MatDestroy(&C)); 14154e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14164e29119aSPierre Jolivet C = *newmat; 14174e29119aSPierre Jolivet } else C = NULL; 14189566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14199566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 1420ac530a7eSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) PetscCall(MatHeaderReplace(A, &C)); 1421ac530a7eSPierre Jolivet else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 14223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14234e29119aSPierre Jolivet } 14244e29119aSPierre Jolivet 142566976f2fSJacob Faibussowitsch static PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1426d71ae5a4SJacob Faibussowitsch { 14274e29119aSPierre Jolivet Mat B, C; 14284e29119aSPierre Jolivet 14294e29119aSPierre Jolivet PetscFunctionBegin; 14309566063dSJacob Faibussowitsch PetscCall(MatDenseGetLocalMatrix(A, &C)); 14319566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqDense_SeqAIJ(C, MATSEQAIJ, MAT_INITIAL_MATRIX, &B)); 14324e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14334e29119aSPierre Jolivet C = *newmat; 14344e29119aSPierre Jolivet } else C = NULL; 14359566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14369566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 1437ac530a7eSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) PetscCall(MatHeaderReplace(A, &C)); 1438ac530a7eSPierre Jolivet else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 14393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14404e29119aSPierre Jolivet } 14414e29119aSPierre Jolivet 144265b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 1443d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1444d71ae5a4SJacob Faibussowitsch { 1445f709e8d7SPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14468ea901baSHong Zhang Mat mat_elemental; 144732d7a744SHong Zhang PetscScalar *v; 1448f709e8d7SPierre Jolivet PetscInt m = A->rmap->n, N = A->cmap->N, rstart = A->rmap->rstart, i, *rows, *cols, lda; 14498ea901baSHong Zhang 14508baccfbdSHong Zhang PetscFunctionBegin; 1451378336b6SHong Zhang if (reuse == MAT_REUSE_MATRIX) { 1452378336b6SHong Zhang mat_elemental = *newmat; 14539566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(*newmat)); 1454378336b6SHong Zhang } else { 14559566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental)); 14569566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat_elemental, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 14579566063dSJacob Faibussowitsch PetscCall(MatSetType(mat_elemental, MATELEMENTAL)); 14589566063dSJacob Faibussowitsch PetscCall(MatSetUp(mat_elemental)); 14599566063dSJacob Faibussowitsch PetscCall(MatSetOption(mat_elemental, MAT_ROW_ORIENTED, PETSC_FALSE)); 1460378336b6SHong Zhang } 1461378336b6SHong Zhang 14629566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &rows, N, &cols)); 146332d7a744SHong Zhang for (i = 0; i < N; i++) cols[i] = i; 146432d7a744SHong Zhang for (i = 0; i < m; i++) rows[i] = rstart + i; 14658ea901baSHong Zhang 1466637a0070SStefano Zampini /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */ 14679566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(A, &v)); 1468f709e8d7SPierre Jolivet PetscCall(MatDenseGetLDA(a->A, &lda)); 1469f709e8d7SPierre Jolivet if (lda == m) PetscCall(MatSetValues(mat_elemental, m, rows, N, cols, v, ADD_VALUES)); 1470f709e8d7SPierre Jolivet else { 1471f709e8d7SPierre Jolivet for (i = 0; i < N; i++) PetscCall(MatSetValues(mat_elemental, m, rows, 1, &i, v + lda * i, ADD_VALUES)); 1472f709e8d7SPierre Jolivet } 14739566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY)); 14749566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY)); 14759566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(A, &v)); 14769566063dSJacob Faibussowitsch PetscCall(PetscFree2(rows, cols)); 14778ea901baSHong Zhang 1478511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 14799566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &mat_elemental)); 14808ea901baSHong Zhang } else { 14818ea901baSHong Zhang *newmat = mat_elemental; 14828ea901baSHong Zhang } 14833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14848baccfbdSHong Zhang } 148565b80a83SHong Zhang #endif 14868baccfbdSHong Zhang 1487d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A, PetscInt col, PetscScalar **vals) 1488d71ae5a4SJacob Faibussowitsch { 148986aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 149086aefd0dSHong Zhang 149186aefd0dSHong Zhang PetscFunctionBegin; 14929566063dSJacob Faibussowitsch PetscCall(MatDenseGetColumn(mat->A, col, vals)); 14933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 149486aefd0dSHong Zhang } 149586aefd0dSHong Zhang 1496d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A, PetscScalar **vals) 1497d71ae5a4SJacob Faibussowitsch { 149886aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 149986aefd0dSHong Zhang 150086aefd0dSHong Zhang PetscFunctionBegin; 15019566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreColumn(mat->A, vals)); 15023ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 150386aefd0dSHong Zhang } 150486aefd0dSHong Zhang 1505d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm, Mat inmat, PetscInt n, MatReuse scall, Mat *outmat) 1506d71ae5a4SJacob Faibussowitsch { 150794e2cb23SJakub Kruzik Mat_MPIDense *mat; 150894e2cb23SJakub Kruzik PetscInt m, nloc, N; 150994e2cb23SJakub Kruzik 151094e2cb23SJakub Kruzik PetscFunctionBegin; 15119566063dSJacob Faibussowitsch PetscCall(MatGetSize(inmat, &m, &N)); 15129566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(inmat, NULL, &nloc)); 151394e2cb23SJakub Kruzik if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */ 151494e2cb23SJakub Kruzik PetscInt sum; 151594e2cb23SJakub Kruzik 151648a46eb9SPierre Jolivet if (n == PETSC_DECIDE) PetscCall(PetscSplitOwnership(comm, &n, &N)); 151794e2cb23SJakub Kruzik /* Check sum(n) = N */ 1518462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(&n, &sum, 1, MPIU_INT, MPI_SUM, comm)); 151908401ef6SPierre Jolivet PetscCheck(sum == N, PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT, sum, N); 152094e2cb23SJakub Kruzik 15219566063dSJacob Faibussowitsch PetscCall(MatCreateDense(comm, m, n, PETSC_DETERMINE, N, NULL, outmat)); 15229566063dSJacob Faibussowitsch PetscCall(MatSetOption(*outmat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 152394e2cb23SJakub Kruzik } 152494e2cb23SJakub Kruzik 152594e2cb23SJakub Kruzik /* numeric phase */ 152694e2cb23SJakub Kruzik mat = (Mat_MPIDense *)(*outmat)->data; 15279566063dSJacob Faibussowitsch PetscCall(MatCopy(inmat, mat->A, SAME_NONZERO_PATTERN)); 15283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 152994e2cb23SJakub Kruzik } 153094e2cb23SJakub Kruzik 1531d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1532d71ae5a4SJacob Faibussowitsch { 15336947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15346947451fSStefano Zampini PetscInt lda; 15356947451fSStefano Zampini 15366947451fSStefano Zampini PetscFunctionBegin; 153728b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 153828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1539d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 15406947451fSStefano Zampini a->vecinuse = col + 1; 15419566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 15429566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, (PetscScalar **)&a->ptrinuse)); 15438e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 15446947451fSStefano Zampini *v = a->cvec; 15453ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15466947451fSStefano Zampini } 15476947451fSStefano Zampini 1548d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1549d71ae5a4SJacob Faibussowitsch { 15506947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15516947451fSStefano Zampini 15526947451fSStefano Zampini PetscFunctionBegin; 155328b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 155428b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector"); 15554186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 15566947451fSStefano Zampini a->vecinuse = 0; 15579566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, (PetscScalar **)&a->ptrinuse)); 15589566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1559742765d3SMatthew Knepley if (v) *v = NULL; 15603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15616947451fSStefano Zampini } 15626947451fSStefano Zampini 1563d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1564d71ae5a4SJacob Faibussowitsch { 15656947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15666947451fSStefano Zampini PetscInt lda; 15676947451fSStefano Zampini 15686947451fSStefano Zampini PetscFunctionBegin; 156928b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 157028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1571d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 15726947451fSStefano Zampini a->vecinuse = col + 1; 15739566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 15749566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &a->ptrinuse)); 15758e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 15769566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(a->cvec)); 15776947451fSStefano Zampini *v = a->cvec; 15783ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15796947451fSStefano Zampini } 15806947451fSStefano Zampini 1581d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1582d71ae5a4SJacob Faibussowitsch { 15836947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15846947451fSStefano Zampini 15856947451fSStefano Zampini PetscFunctionBegin; 15865f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 15875f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 15884186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 15896947451fSStefano Zampini a->vecinuse = 0; 15909566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &a->ptrinuse)); 15919566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(a->cvec)); 15929566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1593742765d3SMatthew Knepley if (v) *v = NULL; 15943ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15956947451fSStefano Zampini } 15966947451fSStefano Zampini 1597d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1598d71ae5a4SJacob Faibussowitsch { 15996947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16006947451fSStefano Zampini PetscInt lda; 16016947451fSStefano Zampini 16026947451fSStefano Zampini PetscFunctionBegin; 16035f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 16045f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1605d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 16066947451fSStefano Zampini a->vecinuse = col + 1; 16079566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 16089566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 16098e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 16106947451fSStefano Zampini *v = a->cvec; 16113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16126947451fSStefano Zampini } 16136947451fSStefano Zampini 1614d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1615d71ae5a4SJacob Faibussowitsch { 16166947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16176947451fSStefano Zampini 16186947451fSStefano Zampini PetscFunctionBegin; 16195f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 16205f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 16214186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 16226947451fSStefano Zampini a->vecinuse = 0; 16239566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 16249566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1625742765d3SMatthew Knepley if (v) *v = NULL; 16263ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16276947451fSStefano Zampini } 16286947451fSStefano Zampini 162966976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A, PetscInt rbegin, PetscInt rend, PetscInt cbegin, PetscInt cend, Mat *v) 1630d71ae5a4SJacob Faibussowitsch { 16315ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1632616b8fbbSStefano Zampini Mat_MPIDense *c; 1633616b8fbbSStefano Zampini MPI_Comm comm; 1634d016bddeSToby Isaac PetscInt prbegin, prend, pcbegin, pcend; 16355ea7661aSPierre Jolivet 16365ea7661aSPierre Jolivet PetscFunctionBegin; 16379566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 16385f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 16395f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1640d016bddeSToby Isaac prbegin = PetscMax(0, PetscMin(A->rmap->rend, rbegin) - A->rmap->rstart); 1641d016bddeSToby Isaac prend = PetscMin(A->rmap->n, PetscMax(0, rend - A->rmap->rstart)); 1642d016bddeSToby Isaac pcbegin = PetscMax(0, PetscMin(A->cmap->rend, cbegin) - A->cmap->rstart); 1643d016bddeSToby Isaac pcend = PetscMin(A->cmap->n, PetscMax(0, cend - A->cmap->rstart)); 16445ea7661aSPierre Jolivet if (!a->cmat) { 16459566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &a->cmat)); 16469566063dSJacob Faibussowitsch PetscCall(MatSetType(a->cmat, ((PetscObject)A)->type_name)); 1647a2748737SPierre Jolivet if (rend - rbegin == A->rmap->N) PetscCall(PetscLayoutReference(A->rmap, &a->cmat->rmap)); 1648a2748737SPierre Jolivet else { 1649d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, prend - prbegin)); 1650a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1651a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1652a2748737SPierre Jolivet } 1653d016bddeSToby Isaac if (cend - cbegin == A->cmap->N) PetscCall(PetscLayoutReference(A->cmap, &a->cmat->cmap)); 1654d016bddeSToby Isaac else { 1655d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->cmap, pcend - pcbegin)); 16569566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 16579566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1658a2748737SPierre Jolivet } 1659616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 1660d016bddeSToby Isaac c->sub_rbegin = rbegin; 1661d016bddeSToby Isaac c->sub_rend = rend; 1662d016bddeSToby Isaac c->sub_cbegin = cbegin; 1663d016bddeSToby Isaac c->sub_cend = cend; 1664d016bddeSToby Isaac } 1665d016bddeSToby Isaac c = (Mat_MPIDense *)a->cmat->data; 1666d016bddeSToby Isaac if (c->sub_rbegin != rbegin || c->sub_rend != rend) { 1667d016bddeSToby Isaac PetscCall(PetscLayoutDestroy(&a->cmat->rmap)); 1668d016bddeSToby Isaac PetscCall(PetscLayoutCreate(comm, &a->cmat->rmap)); 1669d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, prend - prbegin)); 1670d016bddeSToby Isaac PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1671d016bddeSToby Isaac PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1672d016bddeSToby Isaac c->sub_rbegin = rbegin; 1673d016bddeSToby Isaac c->sub_rend = rend; 1674d016bddeSToby Isaac } 1675d016bddeSToby Isaac if (c->sub_cbegin != cbegin || c->sub_cend != cend) { 1676d016bddeSToby Isaac // special optimization: check if all columns are owned by rank 0, in which case no communication is necessary 1677d016bddeSToby Isaac if ((cend - cbegin != a->cmat->cmap->N) || (A->cmap->range[1] != A->cmap->N)) { 1678d016bddeSToby Isaac PetscCall(PetscLayoutDestroy(&a->cmat->cmap)); 1679d016bddeSToby Isaac PetscCall(PetscLayoutCreate(comm, &a->cmat->cmap)); 1680d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->cmap, pcend - pcbegin)); 1681d016bddeSToby Isaac PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 1682d016bddeSToby Isaac PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1683d016bddeSToby Isaac PetscCall(VecDestroy(&c->lvec)); 1684d016bddeSToby Isaac PetscCall(PetscSFDestroy(&c->Mvctx)); 1685d016bddeSToby Isaac } 1686d016bddeSToby Isaac c->sub_cbegin = cbegin; 1687d016bddeSToby Isaac c->sub_cend = cend; 1688d016bddeSToby Isaac } 16895f80ce2aSJacob Faibussowitsch PetscCheck(!c->A, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1690d016bddeSToby Isaac PetscCall(MatDenseGetSubMatrix(a->A, prbegin, prend, cbegin, cend, &c->A)); 16913faff063SStefano Zampini 1692616b8fbbSStefano Zampini a->cmat->preallocated = PETSC_TRUE; 1693616b8fbbSStefano Zampini a->cmat->assembled = PETSC_TRUE; 16943faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 16953faff063SStefano Zampini a->cmat->offloadmask = c->A->offloadmask; 16963faff063SStefano Zampini #endif 16975ea7661aSPierre Jolivet a->matinuse = cbegin + 1; 16985ea7661aSPierre Jolivet *v = a->cmat; 16993ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 17005ea7661aSPierre Jolivet } 17015ea7661aSPierre Jolivet 170266976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A, Mat *v) 1703d71ae5a4SJacob Faibussowitsch { 17045ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1705616b8fbbSStefano Zampini Mat_MPIDense *c; 17065ea7661aSPierre Jolivet 17075ea7661aSPierre Jolivet PetscFunctionBegin; 17085f80ce2aSJacob Faibussowitsch PetscCheck(a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetSubMatrix() first"); 17095f80ce2aSJacob Faibussowitsch PetscCheck(a->cmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal matrix"); 17105f80ce2aSJacob Faibussowitsch PetscCheck(*v == a->cmat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Not the matrix obtained from MatDenseGetSubMatrix()"); 17115ea7661aSPierre Jolivet a->matinuse = 0; 1712616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 17139566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreSubMatrix(a->A, &c->A)); 1714742765d3SMatthew Knepley if (v) *v = NULL; 17153faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 17163faff063SStefano Zampini A->offloadmask = a->A->offloadmask; 17173faff063SStefano Zampini #endif 17183ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 17195ea7661aSPierre Jolivet } 17205ea7661aSPierre Jolivet 1721002bc6daSRichard Tran Mills /*MC 1722002bc6daSRichard Tran Mills MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices. 1723002bc6daSRichard Tran Mills 17242ef1f0ffSBarry Smith Options Database Key: 172511a5261eSBarry Smith . -mat_type mpidense - sets the matrix type to `MATMPIDENSE` during a call to `MatSetFromOptions()` 1726002bc6daSRichard Tran Mills 1727002bc6daSRichard Tran Mills Level: beginner 1728002bc6daSRichard Tran Mills 17291cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreateDense()`, `MATSEQDENSE`, `MATDENSE` 1730002bc6daSRichard Tran Mills M*/ 17314742e46bSJacob Faibussowitsch PetscErrorCode MatCreate_MPIDense(Mat mat) 1732d71ae5a4SJacob Faibussowitsch { 1733273d9f13SBarry Smith Mat_MPIDense *a; 1734273d9f13SBarry Smith 1735273d9f13SBarry Smith PetscFunctionBegin; 17364dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&a)); 1737b0a32e0cSBarry Smith mat->data = (void *)a; 1738aea10558SJacob Faibussowitsch mat->ops[0] = MatOps_Values; 1739273d9f13SBarry Smith 1740273d9f13SBarry Smith mat->insertmode = NOT_SET_VALUES; 1741273d9f13SBarry Smith 1742273d9f13SBarry Smith /* build cache for off array entries formed */ 1743273d9f13SBarry Smith a->donotstash = PETSC_FALSE; 17442205254eSKarl Rupp 17459566063dSJacob Faibussowitsch PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat), 1, &mat->stash)); 1746273d9f13SBarry Smith 1747273d9f13SBarry Smith /* stuff used for matrix vector multiply */ 1748f4259b30SLisandro Dalcin a->lvec = NULL; 1749f4259b30SLisandro Dalcin a->Mvctx = NULL; 1750273d9f13SBarry Smith a->roworiented = PETSC_TRUE; 1751273d9f13SBarry Smith 17529566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", MatDenseGetLDA_MPIDense)); 17539566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", MatDenseSetLDA_MPIDense)); 17549566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", MatDenseGetArray_MPIDense)); 17559566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", MatDenseRestoreArray_MPIDense)); 17569566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", MatDenseGetArrayRead_MPIDense)); 17579566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", MatDenseRestoreArrayRead_MPIDense)); 17589566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", MatDenseGetArrayWrite_MPIDense)); 17599566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", MatDenseRestoreArrayWrite_MPIDense)); 17609566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", MatDensePlaceArray_MPIDense)); 17619566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", MatDenseResetArray_MPIDense)); 17629566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", MatDenseReplaceArray_MPIDense)); 17639566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense)); 17649566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense)); 17659566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense)); 17669566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense)); 17679566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense)); 17689566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense)); 17699566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", MatDenseGetSubMatrix_MPIDense)); 17709566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", MatDenseRestoreSubMatrix_MPIDense)); 17719566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", MatConvert_MPIAIJ_MPIDense)); 17729566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", MatConvert_MPIDense_MPIAIJ)); 17738baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 17749566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", MatConvert_MPIDense_Elemental)); 17758baccfbdSHong Zhang #endif 1776d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 17779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", MatConvert_Dense_ScaLAPACK)); 1778d24d4204SJose E. Roman #endif 1779637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 17809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", MatConvert_MPIDense_MPIDenseCUDA)); 1781637a0070SStefano Zampini #endif 17829566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", MatMPIDenseSetPreallocation_MPIDense)); 17839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 17849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 17856718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 17869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 17879566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 17886718818eSStefano Zampini #endif 178947d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 179047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", MatConvert_MPIDense_MPIDenseHIP)); 179147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 179247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 179347d993e7Ssuyashtn #endif 17949566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", MatDenseGetColumn_MPIDense)); 17959566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", MatDenseRestoreColumn_MPIDense)); 1796d016bddeSToby Isaac PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultColumnRange_C", MatMultColumnRange_MPIDense)); 17970be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultAddColumnRange_C", MatMultAddColumnRange_MPIDense)); 17980be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeColumnRange_C", MatMultHermitianTransposeColumnRange_MPIDense)); 17990be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeAddColumnRange_C", MatMultHermitianTransposeAddColumnRange_MPIDense)); 18009566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATMPIDENSE)); 18013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1802273d9f13SBarry Smith } 1803273d9f13SBarry Smith 1804209238afSKris Buschelman /*MC 1805002d173eSKris Buschelman MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices. 1806209238afSKris Buschelman 180711a5261eSBarry Smith This matrix type is identical to `MATSEQDENSE` when constructed with a single process communicator, 180811a5261eSBarry Smith and `MATMPIDENSE` otherwise. 1809209238afSKris Buschelman 18102ef1f0ffSBarry Smith Options Database Key: 181111a5261eSBarry Smith . -mat_type dense - sets the matrix type to `MATDENSE` during a call to `MatSetFromOptions()` 1812209238afSKris Buschelman 1813209238afSKris Buschelman Level: beginner 1814209238afSKris Buschelman 18151cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATSEQDENSE`, `MATMPIDENSE`, `MATDENSECUDA`, `MATDENSEHIP` 18166947451fSStefano Zampini M*/ 18176947451fSStefano Zampini 18185d83a8b1SBarry Smith /*@ 1819273d9f13SBarry Smith MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries 1820273d9f13SBarry Smith 18218f490ea3SStefano Zampini Collective 1822273d9f13SBarry Smith 1823273d9f13SBarry Smith Input Parameters: 1824fe59aa6dSJacob Faibussowitsch + B - the matrix 18252ef1f0ffSBarry Smith - data - optional location of matrix data. Set to `NULL` for PETSc 1826273d9f13SBarry Smith to control all matrix memory allocation. 1827273d9f13SBarry Smith 18282ef1f0ffSBarry Smith Level: intermediate 18292ef1f0ffSBarry Smith 1830273d9f13SBarry Smith Notes: 18312ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 1832273d9f13SBarry Smith storage by columns. 1833273d9f13SBarry Smith 1834273d9f13SBarry Smith The data input variable is intended primarily for Fortran programmers 1835273d9f13SBarry Smith who wish to allocate their own matrix memory space. Most users should 18362ef1f0ffSBarry Smith set `data` to `NULL`. 1837273d9f13SBarry Smith 18381cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMPIDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 1839273d9f13SBarry Smith @*/ 1840d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMPIDenseSetPreallocation(Mat B, PetscScalar *data) 1841d71ae5a4SJacob Faibussowitsch { 1842273d9f13SBarry Smith PetscFunctionBegin; 1843d5ea218eSStefano Zampini PetscValidHeaderSpecific(B, MAT_CLASSID, 1); 1844cac4c232SBarry Smith PetscTryMethod(B, "MatMPIDenseSetPreallocation_C", (Mat, PetscScalar *), (B, data)); 18453ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1846273d9f13SBarry Smith } 1847273d9f13SBarry Smith 1848d3042a70SBarry Smith /*@ 184911a5261eSBarry Smith MatDensePlaceArray - Allows one to replace the array in a `MATDENSE` matrix with an 1850d3042a70SBarry Smith array provided by the user. This is useful to avoid copying an array 1851d3042a70SBarry Smith into a matrix 1852d3042a70SBarry Smith 1853d3042a70SBarry Smith Not Collective 1854d3042a70SBarry Smith 1855d3042a70SBarry Smith Input Parameters: 1856d3042a70SBarry Smith + mat - the matrix 1857d3042a70SBarry Smith - array - the array in column major order 1858d3042a70SBarry Smith 18592ef1f0ffSBarry Smith Level: developer 18602ef1f0ffSBarry Smith 186111a5261eSBarry Smith Note: 18624d5500e8SJunchao Zhang Adding `const` to `array` was an oversight, see notes in `VecPlaceArray()`. 18634d5500e8SJunchao Zhang 186411a5261eSBarry Smith You can return to the original array with a call to `MatDenseResetArray()`. The user is responsible for freeing this array; it will not be 1865d3042a70SBarry Smith freed when the matrix is destroyed. 1866d3042a70SBarry Smith 18671cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`, 186811a5261eSBarry Smith `MatDenseReplaceArray()` 1869d3042a70SBarry Smith @*/ 1870d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDensePlaceArray(Mat mat, const PetscScalar *array) 1871d71ae5a4SJacob Faibussowitsch { 1872d3042a70SBarry Smith PetscFunctionBegin; 1873d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1874cac4c232SBarry Smith PetscUseMethod(mat, "MatDensePlaceArray_C", (Mat, const PetscScalar *), (mat, array)); 18759566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 187647d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1877637a0070SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1878637a0070SStefano Zampini #endif 18793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1880d3042a70SBarry Smith } 1881d3042a70SBarry Smith 1882d3042a70SBarry Smith /*@ 188311a5261eSBarry Smith MatDenseResetArray - Resets the matrix array to that it previously had before the call to `MatDensePlaceArray()` 1884d3042a70SBarry Smith 1885d3042a70SBarry Smith Not Collective 1886d3042a70SBarry Smith 18872fe279fdSBarry Smith Input Parameter: 1888d3042a70SBarry Smith . mat - the matrix 1889d3042a70SBarry Smith 18902ef1f0ffSBarry Smith Level: developer 18912ef1f0ffSBarry Smith 189211a5261eSBarry Smith Note: 189311a5261eSBarry Smith You can only call this after a call to `MatDensePlaceArray()` 1894d3042a70SBarry Smith 18951cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()` 1896d3042a70SBarry Smith @*/ 1897d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseResetArray(Mat mat) 1898d71ae5a4SJacob Faibussowitsch { 1899d3042a70SBarry Smith PetscFunctionBegin; 1900d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1901cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseResetArray_C", (Mat), (mat)); 19029566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 19033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1904d3042a70SBarry Smith } 1905d3042a70SBarry Smith 1906d5ea218eSStefano Zampini /*@ 1907d5ea218eSStefano Zampini MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an 1908d5ea218eSStefano Zampini array provided by the user. This is useful to avoid copying an array 1909d5ea218eSStefano Zampini into a matrix 1910d5ea218eSStefano Zampini 1911d5ea218eSStefano Zampini Not Collective 1912d5ea218eSStefano Zampini 1913d5ea218eSStefano Zampini Input Parameters: 1914d5ea218eSStefano Zampini + mat - the matrix 1915d5ea218eSStefano Zampini - array - the array in column major order 1916d5ea218eSStefano Zampini 19172ef1f0ffSBarry Smith Level: developer 19182ef1f0ffSBarry Smith 191911a5261eSBarry Smith Note: 19204d5500e8SJunchao Zhang Adding `const` to `array` was an oversight, see notes in `VecPlaceArray()`. 19214d5500e8SJunchao Zhang 192211a5261eSBarry Smith The memory passed in MUST be obtained with `PetscMalloc()` and CANNOT be 1923d5ea218eSStefano Zampini freed by the user. It will be freed when the matrix is destroyed. 1924d5ea218eSStefano Zampini 19251cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatDensePlaceArray()`, `MatDenseGetArray()`, `VecReplaceArray()` 1926d5ea218eSStefano Zampini @*/ 1927d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseReplaceArray(Mat mat, const PetscScalar *array) 1928d71ae5a4SJacob Faibussowitsch { 1929d5ea218eSStefano Zampini PetscFunctionBegin; 1930d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1931cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseReplaceArray_C", (Mat, const PetscScalar *), (mat, array)); 19329566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 193347d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1934d5ea218eSStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1935d5ea218eSStefano Zampini #endif 19363ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1937d5ea218eSStefano Zampini } 1938d5ea218eSStefano Zampini 19395d83a8b1SBarry Smith /*@ 194011a5261eSBarry Smith MatCreateDense - Creates a matrix in `MATDENSE` format. 19418965ea79SLois Curfman McInnes 1942d083f849SBarry Smith Collective 1943db81eaa0SLois Curfman McInnes 19448965ea79SLois Curfman McInnes Input Parameters: 1945db81eaa0SLois Curfman McInnes + comm - MPI communicator 19462ef1f0ffSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if `M` is given) 19472ef1f0ffSBarry Smith . n - number of local columns (or `PETSC_DECIDE` to have calculated if `N` is given) 19482ef1f0ffSBarry Smith . M - number of global rows (or `PETSC_DECIDE` to have calculated if `m` is given) 19492ef1f0ffSBarry Smith . N - number of global columns (or `PETSC_DECIDE` to have calculated if `n` is given) 19502c5cda21SPierre Jolivet - data - optional location of matrix data. Set data to `NULL` (`PETSC_NULL_SCALAR_ARRAY` for Fortran users) for PETSc 1951dfc5480cSLois Curfman McInnes to control all matrix memory allocation. 19528965ea79SLois Curfman McInnes 19538965ea79SLois Curfman McInnes Output Parameter: 1954477f1c0bSLois Curfman McInnes . A - the matrix 19558965ea79SLois Curfman McInnes 19562ef1f0ffSBarry Smith Level: intermediate 19572ef1f0ffSBarry Smith 1958b259b22eSLois Curfman McInnes Notes: 19592ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 196039ddd567SLois Curfman McInnes storage by columns. 196111a5261eSBarry Smith 196211a5261eSBarry Smith Although local portions of the matrix are stored in column-major 1963002bc6daSRichard Tran Mills order, the matrix is partitioned across MPI ranks by row. 19648965ea79SLois Curfman McInnes 196518f449edSLois Curfman McInnes The data input variable is intended primarily for Fortran programmers 196618f449edSLois Curfman McInnes who wish to allocate their own matrix memory space. Most users should 19672c5cda21SPierre Jolivet set `data` to `NULL` (`PETSC_NULL_SCALAR_ARRAY` for Fortran users). 196818f449edSLois Curfman McInnes 19698965ea79SLois Curfman McInnes The user MUST specify either the local or global matrix dimensions 19708965ea79SLois Curfman McInnes (possibly both). 19718965ea79SLois Curfman McInnes 19721cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 19738965ea79SLois Curfman McInnes @*/ 1974ce78bad3SBarry Smith PetscErrorCode MatCreateDense(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar data[], Mat *A) 1975d71ae5a4SJacob Faibussowitsch { 19763a40ed3dSBarry Smith PetscFunctionBegin; 19779566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 19789566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, M, N)); 19796f08ad05SPierre Jolivet PetscCall(MatSetType(*A, MATDENSE)); 19809566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(*A, data)); 19816f08ad05SPierre Jolivet PetscCall(MatMPIDenseSetPreallocation(*A, data)); 19823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19838965ea79SLois Curfman McInnes } 19848965ea79SLois Curfman McInnes 1985d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDuplicate_MPIDense(Mat A, MatDuplicateOption cpvalues, Mat *newmat) 1986d71ae5a4SJacob Faibussowitsch { 19878965ea79SLois Curfman McInnes Mat mat; 19883501a2bdSLois Curfman McInnes Mat_MPIDense *a, *oldmat = (Mat_MPIDense *)A->data; 19898965ea79SLois Curfman McInnes 19903a40ed3dSBarry Smith PetscFunctionBegin; 1991f4259b30SLisandro Dalcin *newmat = NULL; 19929566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat)); 19939566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 19949566063dSJacob Faibussowitsch PetscCall(MatSetType(mat, ((PetscObject)A)->type_name)); 1995834f8fabSBarry Smith a = (Mat_MPIDense *)mat->data; 19965aa7edbeSHong Zhang 1997d5f3da31SBarry Smith mat->factortype = A->factortype; 1998c456f294SBarry Smith mat->assembled = PETSC_TRUE; 1999273d9f13SBarry Smith mat->preallocated = PETSC_TRUE; 20008965ea79SLois Curfman McInnes 2001e0fa3b82SLois Curfman McInnes mat->insertmode = NOT_SET_VALUES; 20023782ba37SSatish Balay a->donotstash = oldmat->donotstash; 2003e04c1aa4SHong Zhang 20049566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->rmap, &mat->rmap)); 20059566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->cmap, &mat->cmap)); 20068965ea79SLois Curfman McInnes 20079566063dSJacob Faibussowitsch PetscCall(MatDuplicate(oldmat->A, cpvalues, &a->A)); 200801b82886SBarry Smith 20098965ea79SLois Curfman McInnes *newmat = mat; 20103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20118965ea79SLois Curfman McInnes } 20128965ea79SLois Curfman McInnes 201366976f2fSJacob Faibussowitsch static PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer) 2014d71ae5a4SJacob Faibussowitsch { 201587d5ce66SSatish Balay PetscBool isbinary; 201687d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 201787d5ce66SSatish Balay PetscBool ishdf5; 201887d5ce66SSatish Balay #endif 2019eb91f321SVaclav Hapla 2020eb91f321SVaclav Hapla PetscFunctionBegin; 2021eb91f321SVaclav Hapla PetscValidHeaderSpecific(newMat, MAT_CLASSID, 1); 2022eb91f321SVaclav Hapla PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 2023eb91f321SVaclav Hapla /* force binary viewer to load .info file if it has not yet done so */ 20249566063dSJacob Faibussowitsch PetscCall(PetscViewerSetUp(viewer)); 20259566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 202687d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 20279566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERHDF5, &ishdf5)); 202887d5ce66SSatish Balay #endif 2029eb91f321SVaclav Hapla if (isbinary) { 20309566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_Binary(newMat, viewer)); 2031eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5) 203287d5ce66SSatish Balay } else if (ishdf5) { 20339566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_HDF5(newMat, viewer)); 2034eb91f321SVaclav Hapla #endif 203598921bdaSJacob Faibussowitsch } else SETERRQ(PetscObjectComm((PetscObject)newMat), PETSC_ERR_SUP, "Viewer type %s not yet supported for reading %s matrices", ((PetscObject)viewer)->type_name, ((PetscObject)newMat)->type_name); 20363ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2037eb91f321SVaclav Hapla } 2038eb91f321SVaclav Hapla 2039d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatEqual_MPIDense(Mat A, Mat B, PetscBool *flag) 2040d71ae5a4SJacob Faibussowitsch { 20416e4ee0c6SHong Zhang Mat_MPIDense *matB = (Mat_MPIDense *)B->data, *matA = (Mat_MPIDense *)A->data; 20426e4ee0c6SHong Zhang Mat a, b; 204390ace30eSBarry Smith 20446e4ee0c6SHong Zhang PetscFunctionBegin; 20456e4ee0c6SHong Zhang a = matA->A; 20466e4ee0c6SHong Zhang b = matB->A; 20472cf15c64SPierre Jolivet PetscCall(MatEqual(a, b, flag)); 2048*5440e5dcSBarry Smith PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, flag, 1, MPI_C_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 20493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20506e4ee0c6SHong Zhang } 205190ace30eSBarry Smith 205266976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data) 2053d71ae5a4SJacob Faibussowitsch { 20546718818eSStefano Zampini Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data; 2055baa3c1c6SHong Zhang 2056baa3c1c6SHong Zhang PetscFunctionBegin; 20579566063dSJacob Faibussowitsch PetscCall(PetscFree2(atb->sendbuf, atb->recvcounts)); 20589566063dSJacob Faibussowitsch PetscCall(MatDestroy(&atb->atb)); 20599566063dSJacob Faibussowitsch PetscCall(PetscFree(atb)); 20603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2061baa3c1c6SHong Zhang } 2062baa3c1c6SHong Zhang 206366976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data) 2064d71ae5a4SJacob Faibussowitsch { 20656718818eSStefano Zampini Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data; 2066cc48ffa7SToby Isaac 2067cc48ffa7SToby Isaac PetscFunctionBegin; 20689566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->buf[0], abt->buf[1])); 20699566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->recvcounts, abt->recvdispls)); 20709566063dSJacob Faibussowitsch PetscCall(PetscFree(abt)); 20713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2072cc48ffa7SToby Isaac } 2073cc48ffa7SToby Isaac 2074d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2075d71ae5a4SJacob Faibussowitsch { 2076baa3c1c6SHong Zhang Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 20776718818eSStefano Zampini Mat_TransMatMultDense *atb; 2078cb20be35SHong Zhang MPI_Comm comm; 20796718818eSStefano Zampini PetscMPIInt size, *recvcounts; 20806718818eSStefano Zampini PetscScalar *carray, *sendbuf; 2081637a0070SStefano Zampini const PetscScalar *atbarray; 2082a1f9a5e6SStefano Zampini PetscInt i, cN = C->cmap->N, proc, k, j, lda; 2083e68c0b26SHong Zhang const PetscInt *ranges; 2084cb20be35SHong Zhang 2085cb20be35SHong Zhang PetscFunctionBegin; 20866718818eSStefano Zampini MatCheckProduct(C, 3); 20875f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 20886718818eSStefano Zampini atb = (Mat_TransMatMultDense *)C->product->data; 20896718818eSStefano Zampini recvcounts = atb->recvcounts; 20906718818eSStefano Zampini sendbuf = atb->sendbuf; 20916718818eSStefano Zampini 20929566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 20939566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 2094e68c0b26SHong Zhang 2095c5ef1628SHong Zhang /* compute atbarray = aseq^T * bseq */ 2096fb842aefSJose E. Roman PetscCall(MatTransposeMatMult(a->A, b->A, atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX, PETSC_DETERMINE, &atb->atb)); 2097cb20be35SHong Zhang 20989566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 2099cb20be35SHong Zhang 2100d016bddeSToby Isaac if (ranges[1] == C->rmap->N) { 2101d016bddeSToby Isaac /* all of the values are being reduced to rank 0: optimize this case to use MPI_Reduce and GPU aware MPI if available */ 2102d016bddeSToby Isaac PetscInt atb_lda, c_lda; 2103d016bddeSToby Isaac Mat atb_local = atb->atb; 2104d016bddeSToby Isaac Mat atb_alloc = NULL; 2105d016bddeSToby Isaac Mat c_local = c->A; 2106d016bddeSToby Isaac Mat c_alloc = NULL; 2107d016bddeSToby Isaac PetscMemType atb_memtype, c_memtype; 2108d016bddeSToby Isaac const PetscScalar *atb_array = NULL; 2109d016bddeSToby Isaac MPI_Datatype vector_type; 2110d016bddeSToby Isaac PetscScalar *c_array = NULL; 2111d016bddeSToby Isaac PetscMPIInt rank; 2112d016bddeSToby Isaac 2113d016bddeSToby Isaac PetscCallMPI(MPI_Comm_rank(comm, &rank)); 2114d016bddeSToby Isaac 2115d016bddeSToby Isaac PetscCall(MatDenseGetLDA(atb_local, &atb_lda)); 2116d016bddeSToby Isaac if (atb_lda != C->rmap->N) { 2117d016bddeSToby Isaac // copy atb to a matrix that will have lda == the number of rows 2118d016bddeSToby Isaac PetscCall(MatDuplicate(atb_local, MAT_DO_NOT_COPY_VALUES, &atb_alloc)); 2119d016bddeSToby Isaac PetscCall(MatCopy(atb_local, atb_alloc, DIFFERENT_NONZERO_PATTERN)); 2120d016bddeSToby Isaac atb_local = atb_alloc; 2121d016bddeSToby Isaac } 2122d016bddeSToby Isaac 2123d016bddeSToby Isaac if (rank == 0) { 2124d016bddeSToby Isaac PetscCall(MatDenseGetLDA(c_local, &c_lda)); 2125d016bddeSToby Isaac if (c_lda != C->rmap->N) { 2126d016bddeSToby Isaac // copy c to a matrix that will have lda == the number of rows 2127d016bddeSToby Isaac PetscCall(MatDuplicate(c_local, MAT_DO_NOT_COPY_VALUES, &c_alloc)); 2128d016bddeSToby Isaac c_local = c_alloc; 2129d016bddeSToby Isaac } 2130d016bddeSToby Isaac PetscCall(MatZeroEntries(c_local)); 2131d016bddeSToby Isaac } 2132d016bddeSToby Isaac /* atb_local and c_local have nrows = lda = A->cmap->N and ncols = 2133d016bddeSToby Isaac * B->cmap->N: use the a->Mvctx to use the best reduction method */ 2134d016bddeSToby Isaac if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 2135d016bddeSToby Isaac vector_type = MPIU_SCALAR; 2136d016bddeSToby Isaac if (B->cmap->N > 1) { 2137b682a77bSToby Isaac PetscMPIInt mpi_N; 2138b682a77bSToby Isaac 2139b682a77bSToby Isaac PetscCall(PetscMPIIntCast(B->cmap->N, &mpi_N)); 2140b682a77bSToby Isaac PetscCallMPI(MPI_Type_contiguous(mpi_N, MPIU_SCALAR, &vector_type)); 2141d016bddeSToby Isaac PetscCallMPI(MPI_Type_commit(&vector_type)); 2142d016bddeSToby Isaac } 2143d016bddeSToby Isaac PetscCall(MatDenseGetArrayReadAndMemType(atb_local, &atb_array, &atb_memtype)); 2144d016bddeSToby Isaac PetscCall(MatDenseGetArrayWriteAndMemType(c_local, &c_array, &c_memtype)); 2145d016bddeSToby Isaac PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, vector_type, atb_memtype, atb_array, c_memtype, c_array, MPIU_SUM)); 2146d016bddeSToby Isaac PetscCall(PetscSFReduceEnd(a->Mvctx, vector_type, atb_array, c_array, MPIU_SUM)); 2147d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayWriteAndMemType(c_local, &c_array)); 2148d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayReadAndMemType(atb_local, &atb_array)); 2149d016bddeSToby Isaac if (rank == 0 && c_local != c->A) PetscCall(MatCopy(c_local, c->A, DIFFERENT_NONZERO_PATTERN)); 2150d016bddeSToby Isaac if (B->cmap->N > 1) PetscCallMPI(MPI_Type_free(&vector_type)); 2151d016bddeSToby Isaac PetscCall(MatDestroy(&atb_alloc)); 2152d016bddeSToby Isaac PetscCall(MatDestroy(&c_alloc)); 2153d016bddeSToby Isaac PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 2154d016bddeSToby Isaac PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 2155d016bddeSToby Isaac PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 2156d016bddeSToby Isaac PetscFunctionReturn(PETSC_SUCCESS); 2157d016bddeSToby Isaac } 2158d016bddeSToby Isaac 2159660d5466SHong Zhang /* arrange atbarray into sendbuf */ 21609566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(atb->atb, &atbarray)); 21619566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(atb->atb, &lda)); 2162637a0070SStefano Zampini for (proc = 0, k = 0; proc < size; proc++) { 2163baa3c1c6SHong Zhang for (j = 0; j < cN; j++) { 2164a1f9a5e6SStefano Zampini for (i = ranges[proc]; i < ranges[proc + 1]; i++) sendbuf[k++] = atbarray[i + j * lda]; 2165cb20be35SHong Zhang } 2166cb20be35SHong Zhang } 21679566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(atb->atb, &atbarray)); 2168637a0070SStefano Zampini 2169c5ef1628SHong Zhang /* sum all atbarray to local values of C */ 21709566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &carray)); 21719566063dSJacob Faibussowitsch PetscCallMPI(MPI_Reduce_scatter(sendbuf, carray, recvcounts, MPIU_SCALAR, MPIU_SUM, comm)); 21729566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &carray)); 217367af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 21749566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 21759566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 21763ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2177cb20be35SHong Zhang } 2178cb20be35SHong Zhang 2179d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2180d71ae5a4SJacob Faibussowitsch { 2181cb20be35SHong Zhang MPI_Comm comm; 2182baa3c1c6SHong Zhang PetscMPIInt size; 2183660d5466SHong Zhang PetscInt cm = A->cmap->n, cM, cN = B->cmap->N; 2184baa3c1c6SHong Zhang Mat_TransMatMultDense *atb; 218547d993e7Ssuyashtn PetscBool cisdense = PETSC_FALSE; 21860acaeb71SStefano Zampini const PetscInt *ranges; 2187cb20be35SHong Zhang 2188cb20be35SHong Zhang PetscFunctionBegin; 21898f83a4d9SJacob Faibussowitsch MatCheckProduct(C, 4); 21905f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 21919566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 2192966bd95aSPierre Jolivet PetscCheck(A->rmap->rstart == B->rmap->rstart && A->rmap->rend == B->rmap->rend, comm, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, 2193966bd95aSPierre Jolivet A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2194cb20be35SHong Zhang 21954222ddf1SHong Zhang /* create matrix product C */ 21969566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, cm, B->cmap->n, A->cmap->N, B->cmap->N)); 219747d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 21989566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSECUDA, "")); 219947d993e7Ssuyashtn #endif 220047d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 220147d993e7Ssuyashtn PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSEHIP, "")); 220247d993e7Ssuyashtn #endif 220348a46eb9SPierre Jolivet if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)A)->type_name)); 22049566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2205baa3c1c6SHong Zhang 22064222ddf1SHong Zhang /* create data structure for reuse C */ 22079566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22089566063dSJacob Faibussowitsch PetscCall(PetscNew(&atb)); 22094222ddf1SHong Zhang cM = C->rmap->N; 22109566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(cM * cN, &atb->sendbuf, size, &atb->recvcounts)); 22119566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 22126497c311SBarry Smith for (PetscMPIInt i = 0; i < size; i++) PetscCall(PetscMPIIntCast((ranges[i + 1] - ranges[i]) * cN, &atb->recvcounts[i])); 22136718818eSStefano Zampini C->product->data = atb; 22146718818eSStefano Zampini C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense; 22153ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2216cb20be35SHong Zhang } 2217cb20be35SHong Zhang 2218d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2219d71ae5a4SJacob Faibussowitsch { 2220cc48ffa7SToby Isaac MPI_Comm comm; 2221cc48ffa7SToby Isaac PetscMPIInt i, size; 2222cc48ffa7SToby Isaac PetscInt maxRows, bufsiz; 2223cc48ffa7SToby Isaac PetscMPIInt tag; 22244222ddf1SHong Zhang PetscInt alg; 2225cc48ffa7SToby Isaac Mat_MatTransMultDense *abt; 22264222ddf1SHong Zhang Mat_Product *product = C->product; 22274222ddf1SHong Zhang PetscBool flg; 2228cc48ffa7SToby Isaac 2229cc48ffa7SToby Isaac PetscFunctionBegin; 22306718818eSStefano Zampini MatCheckProduct(C, 4); 22315f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 22324222ddf1SHong Zhang /* check local size of A and B */ 22335f80ce2aSJacob Faibussowitsch PetscCheck(A->cmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")", A->cmap->n, B->cmap->n); 2234cc48ffa7SToby Isaac 22359566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "allgatherv", &flg)); 2236637a0070SStefano Zampini alg = flg ? 0 : 1; 2237cc48ffa7SToby Isaac 22384222ddf1SHong Zhang /* setup matrix product C */ 22399566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, A->rmap->n, B->rmap->n, A->rmap->N, B->rmap->N)); 22409566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATMPIDENSE)); 22419566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 22429566063dSJacob Faibussowitsch PetscCall(PetscObjectGetNewTag((PetscObject)C, &tag)); 22434222ddf1SHong Zhang 22444222ddf1SHong Zhang /* create data structure for reuse C */ 22459566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 22469566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22479566063dSJacob Faibussowitsch PetscCall(PetscNew(&abt)); 2248cc48ffa7SToby Isaac abt->tag = tag; 2249faa55883SToby Isaac abt->alg = alg; 2250faa55883SToby Isaac switch (alg) { 22514222ddf1SHong Zhang case 1: /* alg: "cyclic" */ 225257508eceSPierre Jolivet for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, B->rmap->range[i + 1] - B->rmap->range[i]); 2253cc48ffa7SToby Isaac bufsiz = A->cmap->N * maxRows; 2254f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(bufsiz, &abt->buf[0], bufsiz, &abt->buf[1])); 2255faa55883SToby Isaac break; 22564222ddf1SHong Zhang default: /* alg: "allgatherv" */ 2257f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &abt->buf[0], B->rmap->N * B->cmap->N, &abt->buf[1])); 2258f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(size, &abt->recvcounts, size + 1, &abt->recvdispls)); 22596497c311SBarry Smith for (i = 0; i <= size; i++) PetscCall(PetscMPIIntCast(B->rmap->range[i] * A->cmap->N, &abt->recvdispls[i])); 22606497c311SBarry Smith for (i = 0; i < size; i++) PetscCall(PetscMPIIntCast(abt->recvdispls[i + 1] - abt->recvdispls[i], &abt->recvcounts[i])); 2261faa55883SToby Isaac break; 2262faa55883SToby Isaac } 2263cc48ffa7SToby Isaac 22646718818eSStefano Zampini C->product->data = abt; 22656718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense; 22664222ddf1SHong Zhang C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense; 22673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2268cc48ffa7SToby Isaac } 2269cc48ffa7SToby Isaac 2270d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C) 2271d71ae5a4SJacob Faibussowitsch { 2272cc48ffa7SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 22736718818eSStefano Zampini Mat_MatTransMultDense *abt; 2274cc48ffa7SToby Isaac MPI_Comm comm; 22756497c311SBarry Smith PetscMPIInt rank, size, sendto, recvfrom, recvisfrom; 2276f4259b30SLisandro Dalcin PetscScalar *sendbuf, *recvbuf = NULL, *cv; 22776497c311SBarry Smith PetscInt i, cK = A->cmap->N, sendsiz, recvsiz, k, j, bn; 2278cc48ffa7SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2279637a0070SStefano Zampini const PetscScalar *av, *bv; 228023fff9afSBarry Smith PetscBLASInt cm, cn, ck, alda, blda = 0, clda; 2281cc48ffa7SToby Isaac MPI_Request reqs[2]; 2282cc48ffa7SToby Isaac const PetscInt *ranges; 2283cc48ffa7SToby Isaac 2284cc48ffa7SToby Isaac PetscFunctionBegin; 22856718818eSStefano Zampini MatCheckProduct(C, 3); 22865f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 22876718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 22889566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 22899566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 22909566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22919566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 22929566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 22939566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 22949566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 22959566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 22969566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &i)); 22979566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &blda)); 22989566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 22999566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 23009566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(B, &ranges)); 2301cc48ffa7SToby Isaac bn = B->rmap->n; 2302637a0070SStefano Zampini if (blda == bn) { 2303637a0070SStefano Zampini sendbuf = (PetscScalar *)bv; 2304cc48ffa7SToby Isaac } else { 2305cc48ffa7SToby Isaac sendbuf = abt->buf[0]; 2306cc48ffa7SToby Isaac for (k = 0, i = 0; i < cK; i++) { 2307ad540459SPierre Jolivet for (j = 0; j < bn; j++, k++) sendbuf[k] = bv[i * blda + j]; 2308cc48ffa7SToby Isaac } 2309cc48ffa7SToby Isaac } 2310cc48ffa7SToby Isaac if (size > 1) { 2311cc48ffa7SToby Isaac sendto = (rank + size - 1) % size; 2312cc48ffa7SToby Isaac recvfrom = (rank + size + 1) % size; 2313cc48ffa7SToby Isaac } else { 2314cc48ffa7SToby Isaac sendto = recvfrom = 0; 2315cc48ffa7SToby Isaac } 23169566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 23179566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 2318cc48ffa7SToby Isaac recvisfrom = rank; 2319cc48ffa7SToby Isaac for (i = 0; i < size; i++) { 2320cc48ffa7SToby Isaac /* we have finished receiving in sending, bufs can be read/modified */ 23216497c311SBarry Smith PetscMPIInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */ 2322cc48ffa7SToby Isaac PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom]; 2323cc48ffa7SToby Isaac 2324cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2325cc48ffa7SToby Isaac /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */ 2326cc48ffa7SToby Isaac sendsiz = cK * bn; 2327cc48ffa7SToby Isaac recvsiz = cK * nextbn; 2328cc48ffa7SToby Isaac recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1]; 23296497c311SBarry Smith PetscCallMPI(MPIU_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0])); 23306497c311SBarry Smith PetscCallMPI(MPIU_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1])); 2331cc48ffa7SToby Isaac } 2332cc48ffa7SToby Isaac 2333cc48ffa7SToby Isaac /* local aseq * sendbuf^T */ 23349566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn)); 2335792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "T", &cm, &cn, &ck, &_DOne, av, &alda, sendbuf, &cn, &_DZero, cv + clda * ranges[recvisfrom], &clda)); 2336cc48ffa7SToby Isaac 2337cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2338cc48ffa7SToby Isaac /* wait for the sends and receives to complete, swap sendbuf and recvbuf */ 23399566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE)); 2340cc48ffa7SToby Isaac } 2341cc48ffa7SToby Isaac bn = nextbn; 2342cc48ffa7SToby Isaac recvisfrom = nextrecvisfrom; 2343cc48ffa7SToby Isaac sendbuf = recvbuf; 2344cc48ffa7SToby Isaac } 23459566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 23469566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 23479566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 234867af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 23499566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 23509566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 23513ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2352cc48ffa7SToby Isaac } 2353cc48ffa7SToby Isaac 2354d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C) 2355d71ae5a4SJacob Faibussowitsch { 2356faa55883SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 23576718818eSStefano Zampini Mat_MatTransMultDense *abt; 2358faa55883SToby Isaac MPI_Comm comm; 23596497c311SBarry Smith PetscMPIInt size, ibn; 2360637a0070SStefano Zampini PetscScalar *cv, *sendbuf, *recvbuf; 2361637a0070SStefano Zampini const PetscScalar *av, *bv; 2362637a0070SStefano Zampini PetscInt blda, i, cK = A->cmap->N, k, j, bn; 2363faa55883SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2364637a0070SStefano Zampini PetscBLASInt cm, cn, ck, alda, clda; 2365faa55883SToby Isaac 2366faa55883SToby Isaac PetscFunctionBegin; 23676718818eSStefano Zampini MatCheckProduct(C, 3); 23685f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 23696718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 23709566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 23719566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 23729566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 23739566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 23749566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 23759566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 23769566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 23779566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &blda)); 23789566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 23799566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 2380faa55883SToby Isaac /* copy transpose of B into buf[0] */ 2381faa55883SToby Isaac bn = B->rmap->n; 2382faa55883SToby Isaac sendbuf = abt->buf[0]; 2383faa55883SToby Isaac recvbuf = abt->buf[1]; 2384faa55883SToby Isaac for (k = 0, j = 0; j < bn; j++) { 2385ad540459SPierre Jolivet for (i = 0; i < cK; i++, k++) sendbuf[k] = bv[i * blda + j]; 2386faa55883SToby Isaac } 23879566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 23886497c311SBarry Smith PetscCall(PetscMPIIntCast(bn * cK, &ibn)); 23896497c311SBarry Smith PetscCallMPI(MPI_Allgatherv(sendbuf, ibn, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm)); 23909566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 23919566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 23929566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->cmap->n, &cn)); 2393792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "N", &cm, &cn, &ck, &_DOne, av, &alda, recvbuf, &ck, &_DZero, cv, &clda)); 23949566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 23959566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 23969566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 239767af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 23989566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 23999566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 24003ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2401faa55883SToby Isaac } 2402faa55883SToby Isaac 2403d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2404d71ae5a4SJacob Faibussowitsch { 24056718818eSStefano Zampini Mat_MatTransMultDense *abt; 2406faa55883SToby Isaac 2407faa55883SToby Isaac PetscFunctionBegin; 24086718818eSStefano Zampini MatCheckProduct(C, 3); 24095f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 24106718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 2411faa55883SToby Isaac switch (abt->alg) { 2412d71ae5a4SJacob Faibussowitsch case 1: 2413d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C)); 2414d71ae5a4SJacob Faibussowitsch break; 2415d71ae5a4SJacob Faibussowitsch default: 2416d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C)); 2417d71ae5a4SJacob Faibussowitsch break; 2418faa55883SToby Isaac } 24193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2420faa55883SToby Isaac } 2421faa55883SToby Isaac 242266976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data) 2423d71ae5a4SJacob Faibussowitsch { 24246718818eSStefano Zampini Mat_MatMultDense *ab = (Mat_MatMultDense *)data; 2425320f2790SHong Zhang 2426320f2790SHong Zhang PetscFunctionBegin; 24279566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ce)); 24289566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ae)); 24299566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Be)); 24309566063dSJacob Faibussowitsch PetscCall(PetscFree(ab)); 24313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2432320f2790SHong Zhang } 2433320f2790SHong Zhang 24345d8c7819SPierre Jolivet static PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2435d71ae5a4SJacob Faibussowitsch { 24366718818eSStefano Zampini Mat_MatMultDense *ab; 24375d8c7819SPierre Jolivet Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 2438d016bddeSToby Isaac Mat_MPIDense *b = (Mat_MPIDense *)B->data; 2439320f2790SHong Zhang 2440320f2790SHong Zhang PetscFunctionBegin; 24416718818eSStefano Zampini MatCheckProduct(C, 3); 24425f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Missing product data"); 24436718818eSStefano Zampini ab = (Mat_MatMultDense *)C->product->data; 24445d8c7819SPierre Jolivet if (ab->Ae && ab->Ce) { 24455d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 24469566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(A, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Ae)); 24479566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(B, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Be)); 24489566063dSJacob Faibussowitsch PetscCall(MatMatMultNumeric_Elemental(ab->Ae, ab->Be, ab->Ce)); 24499566063dSJacob Faibussowitsch PetscCall(MatConvert(ab->Ce, MATMPIDENSE, MAT_REUSE_MATRIX, &C)); 24505d8c7819SPierre Jolivet #else 24515d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 24525d8c7819SPierre Jolivet #endif 24535d8c7819SPierre Jolivet } else { 2454d016bddeSToby Isaac MPI_Comm comm; 24555d8c7819SPierre Jolivet const PetscScalar *read; 24565d8c7819SPierre Jolivet PetscScalar *write; 24575d8c7819SPierre Jolivet PetscInt lda; 2458d016bddeSToby Isaac const PetscInt *ranges; 2459d016bddeSToby Isaac PetscMPIInt size; 24605d8c7819SPierre Jolivet 2461d016bddeSToby Isaac if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); /* cannot be done during the symbolic phase because of possible calls to MatProductReplaceMats() */ 2462d016bddeSToby Isaac comm = PetscObjectComm((PetscObject)B); 2463d016bddeSToby Isaac PetscCallMPI(MPI_Comm_size(comm, &size)); 2464d016bddeSToby Isaac PetscCall(PetscLayoutGetRanges(B->rmap, &ranges)); 2465d016bddeSToby Isaac if (ranges[1] == ranges[size]) { 2466d016bddeSToby Isaac // optimize for the case where the B matrix is broadcast from rank 0 2467d016bddeSToby Isaac PetscInt b_lda, be_lda; 2468d016bddeSToby Isaac Mat b_local = b->A; 2469d016bddeSToby Isaac Mat b_alloc = NULL; 2470d016bddeSToby Isaac Mat be_local = ab->Be; 2471d016bddeSToby Isaac Mat be_alloc = NULL; 2472d016bddeSToby Isaac PetscMemType b_memtype, be_memtype; 2473d016bddeSToby Isaac const PetscScalar *b_array = NULL; 2474d016bddeSToby Isaac MPI_Datatype vector_type; 2475d016bddeSToby Isaac PetscScalar *be_array = NULL; 2476d016bddeSToby Isaac PetscMPIInt rank; 2477d016bddeSToby Isaac 2478d016bddeSToby Isaac PetscCallMPI(MPI_Comm_rank(comm, &rank)); 2479d016bddeSToby Isaac PetscCall(MatDenseGetLDA(be_local, &be_lda)); 2480d016bddeSToby Isaac if (be_lda != B->rmap->N) { 2481d016bddeSToby Isaac PetscCall(MatDuplicate(be_local, MAT_DO_NOT_COPY_VALUES, &be_alloc)); 2482d016bddeSToby Isaac be_local = be_alloc; 2483d016bddeSToby Isaac } 2484d016bddeSToby Isaac 2485d016bddeSToby Isaac if (rank == 0) { 2486d016bddeSToby Isaac PetscCall(MatDenseGetLDA(b_local, &b_lda)); 2487d016bddeSToby Isaac if (b_lda != B->rmap->N) { 2488d016bddeSToby Isaac PetscCall(MatDuplicate(b_local, MAT_DO_NOT_COPY_VALUES, &b_alloc)); 2489d016bddeSToby Isaac PetscCall(MatCopy(b_local, b_alloc, DIFFERENT_NONZERO_PATTERN)); 2490d016bddeSToby Isaac b_local = b_alloc; 2491d016bddeSToby Isaac } 2492d016bddeSToby Isaac } 2493b682a77bSToby Isaac vector_type = MPIU_SCALAR; 2494b682a77bSToby Isaac if (B->cmap->N > 1) { 2495b682a77bSToby Isaac PetscMPIInt mpi_N; 2496b682a77bSToby Isaac 2497b682a77bSToby Isaac PetscCall(PetscMPIIntCast(B->cmap->N, &mpi_N)); 2498b682a77bSToby Isaac PetscCallMPI(MPI_Type_contiguous(mpi_N, MPIU_SCALAR, &vector_type)); 2499d016bddeSToby Isaac PetscCallMPI(MPI_Type_commit(&vector_type)); 2500b682a77bSToby Isaac } 2501d016bddeSToby Isaac PetscCall(MatDenseGetArrayReadAndMemType(b_local, &b_array, &b_memtype)); 2502d016bddeSToby Isaac PetscCall(MatDenseGetArrayWriteAndMemType(be_local, &be_array, &be_memtype)); 2503d016bddeSToby Isaac PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, vector_type, b_memtype, b_array, be_memtype, be_array, MPI_REPLACE)); 2504d016bddeSToby Isaac PetscCall(PetscSFBcastEnd(mdn->Mvctx, vector_type, b_array, be_array, MPI_REPLACE)); 2505d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayWriteAndMemType(be_local, &be_array)); 2506d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayReadAndMemType(b_local, &b_array)); 2507d016bddeSToby Isaac if (be_local != ab->Be) PetscCall(MatCopy(be_local, ab->Be, DIFFERENT_NONZERO_PATTERN)); 2508b682a77bSToby Isaac if (B->cmap->N > 1) PetscCallMPI(MPI_Type_free(&vector_type)); 2509d016bddeSToby Isaac PetscCall(MatDestroy(&be_alloc)); 2510d016bddeSToby Isaac PetscCall(MatDestroy(&b_alloc)); 2511d016bddeSToby Isaac } else { 25125d8c7819SPierre Jolivet PetscCall(MatDenseGetLDA(B, &lda)); 25135d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayRead(B, &read)); 25145d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayWrite(ab->Be, &write)); 25155d8c7819SPierre Jolivet for (PetscInt i = 0; i < C->cmap->N; ++i) { 25165d8c7819SPierre Jolivet PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 25175d8c7819SPierre Jolivet PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 25185d8c7819SPierre Jolivet } 25195d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayWrite(ab->Be, &write)); 25205d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(B, &read)); 2521d016bddeSToby Isaac } 2522f4f49eeaSPierre Jolivet PetscCall(MatMatMultNumeric_SeqDense_SeqDense(((Mat_MPIDense *)A->data)->A, ab->Be, ((Mat_MPIDense *)C->data)->A)); 25235d8c7819SPierre Jolivet } 25243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2525320f2790SHong Zhang } 2526320f2790SHong Zhang 2527d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2528d71ae5a4SJacob Faibussowitsch { 25295d8c7819SPierre Jolivet Mat_Product *product = C->product; 25305d8c7819SPierre Jolivet PetscInt alg; 2531320f2790SHong Zhang Mat_MatMultDense *ab; 25325d8c7819SPierre Jolivet PetscBool flg; 2533320f2790SHong Zhang 2534320f2790SHong Zhang PetscFunctionBegin; 25356718818eSStefano Zampini MatCheckProduct(C, 4); 25365f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 25374222ddf1SHong Zhang /* check local size of A and B */ 25385d8c7819SPierre Jolivet PetscCheck(A->cmap->rstart == B->rmap->rstart && A->cmap->rend == B->rmap->rend, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ", %" PetscInt_FMT ")", 25395d8c7819SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2540320f2790SHong Zhang 25415d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "petsc", &flg)); 25425d8c7819SPierre Jolivet alg = flg ? 0 : 1; 25434222ddf1SHong Zhang 25444222ddf1SHong Zhang /* setup C */ 25455d8c7819SPierre Jolivet PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, A->rmap->N, B->cmap->N)); 25465d8c7819SPierre Jolivet PetscCall(MatSetType(C, MATMPIDENSE)); 25479566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2548320f2790SHong Zhang 2549320f2790SHong Zhang /* create data structure for reuse Cdense */ 25509566063dSJacob Faibussowitsch PetscCall(PetscNew(&ab)); 25515d8c7819SPierre Jolivet 25525d8c7819SPierre Jolivet switch (alg) { 25535d8c7819SPierre Jolivet case 1: /* alg: "elemental" */ 25545d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 25555d8c7819SPierre Jolivet /* create elemental matrices Ae and Be */ 25565d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &ab->Ae)); 25575d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Ae, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 25585d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Ae, MATELEMENTAL)); 25595d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Ae)); 25605d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Ae, MAT_ROW_ORIENTED, PETSC_FALSE)); 25615d8c7819SPierre Jolivet 25625d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &ab->Be)); 25635d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Be, PETSC_DECIDE, PETSC_DECIDE, B->rmap->N, B->cmap->N)); 25645d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Be, MATELEMENTAL)); 25655d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Be)); 25665d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Be, MAT_ROW_ORIENTED, PETSC_FALSE)); 25675d8c7819SPierre Jolivet 25685d8c7819SPierre Jolivet /* compute symbolic Ce = Ae*Be */ 25695d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)C), &ab->Ce)); 25705d8c7819SPierre Jolivet PetscCall(MatMatMultSymbolic_Elemental(ab->Ae, ab->Be, fill, ab->Ce)); 25715d8c7819SPierre Jolivet #else 25725d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 25735d8c7819SPierre Jolivet #endif 25745d8c7819SPierre Jolivet break; 25755d8c7819SPierre Jolivet default: /* alg: "petsc" */ 25765d8c7819SPierre Jolivet ab->Ae = NULL; 25775d8c7819SPierre Jolivet PetscCall(MatCreateSeqDense(PETSC_COMM_SELF, A->cmap->N, B->cmap->N, NULL, &ab->Be)); 25785d8c7819SPierre Jolivet ab->Ce = NULL; 25795d8c7819SPierre Jolivet break; 25805d8c7819SPierre Jolivet } 25816718818eSStefano Zampini 25826718818eSStefano Zampini C->product->data = ab; 25836718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense; 25844222ddf1SHong Zhang C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense; 25853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2586320f2790SHong Zhang } 25872ef1f0ffSBarry Smith 2588d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C) 2589d71ae5a4SJacob Faibussowitsch { 25905d8c7819SPierre Jolivet Mat_Product *product = C->product; 25915d8c7819SPierre Jolivet const char *algTypes[2] = {"petsc", "elemental"}; 25925d8c7819SPierre Jolivet PetscInt alg, nalg = PetscDefined(HAVE_ELEMENTAL) ? 2 : 1; 25935d8c7819SPierre Jolivet PetscBool flg = PETSC_FALSE; 25945d8c7819SPierre Jolivet 25954d86920dSPierre Jolivet PetscFunctionBegin; 25965d8c7819SPierre Jolivet /* Set default algorithm */ 2597f0b74427SPierre Jolivet alg = 0; /* default is PETSc */ 25985d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "default", &flg)); 2599835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26005d8c7819SPierre Jolivet 26015d8c7819SPierre Jolivet /* Get runtime option */ 26025d8c7819SPierre Jolivet PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_AB", "Mat"); 26035d8c7819SPierre Jolivet PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_AB", algTypes, nalg, algTypes[alg], &alg, &flg)); 26045d8c7819SPierre Jolivet PetscOptionsEnd(); 2605835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26065d8c7819SPierre Jolivet 26074222ddf1SHong Zhang C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense; 26084222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_AB; 26093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2610320f2790SHong Zhang } 261186aefd0dSHong Zhang 2612d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C) 2613d71ae5a4SJacob Faibussowitsch { 26144222ddf1SHong Zhang Mat_Product *product = C->product; 26154222ddf1SHong Zhang Mat A = product->A, B = product->B; 26164222ddf1SHong Zhang 26174222ddf1SHong Zhang PetscFunctionBegin; 261807e90273SPierre Jolivet PetscCheck(A->rmap->rstart == B->rmap->rstart && A->rmap->rend == B->rmap->rend, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")", 261907e90273SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 26206718818eSStefano Zampini C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense; 26216718818eSStefano Zampini C->ops->productsymbolic = MatProductSymbolic_AtB; 26223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26234222ddf1SHong Zhang } 26244222ddf1SHong Zhang 2625d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C) 2626d71ae5a4SJacob Faibussowitsch { 26274222ddf1SHong Zhang Mat_Product *product = C->product; 26284222ddf1SHong Zhang const char *algTypes[2] = {"allgatherv", "cyclic"}; 26294222ddf1SHong Zhang PetscInt alg, nalg = 2; 26304222ddf1SHong Zhang PetscBool flg = PETSC_FALSE; 26314222ddf1SHong Zhang 26324222ddf1SHong Zhang PetscFunctionBegin; 26334222ddf1SHong Zhang /* Set default algorithm */ 26344222ddf1SHong Zhang alg = 0; /* default is allgatherv */ 26359566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "default", &flg)); 2636835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26374222ddf1SHong Zhang 26384222ddf1SHong Zhang /* Get runtime option */ 26394222ddf1SHong Zhang if (product->api_user) { 2640d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatMatTransposeMult", "Mat"); 26419566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via", "Algorithmic approach", "MatMatTransposeMult", algTypes, nalg, algTypes[alg], &alg, &flg)); 2642d0609cedSBarry Smith PetscOptionsEnd(); 26434222ddf1SHong Zhang } else { 2644d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_ABt", "Mat"); 26459566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_ABt", algTypes, nalg, algTypes[alg], &alg, &flg)); 2646d0609cedSBarry Smith PetscOptionsEnd(); 26474222ddf1SHong Zhang } 2648835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26494222ddf1SHong Zhang 26504222ddf1SHong Zhang C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense; 26514222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_ABt; 26523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26534222ddf1SHong Zhang } 26544222ddf1SHong Zhang 26555d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C) 2656d71ae5a4SJacob Faibussowitsch { 26574222ddf1SHong Zhang Mat_Product *product = C->product; 26584222ddf1SHong Zhang 26594222ddf1SHong Zhang PetscFunctionBegin; 26604222ddf1SHong Zhang switch (product->type) { 2661d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AB: 2662d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AB(C)); 2663d71ae5a4SJacob Faibussowitsch break; 2664d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AtB: 2665d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AtB(C)); 2666d71ae5a4SJacob Faibussowitsch break; 2667d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABt: 2668d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_ABt(C)); 2669d71ae5a4SJacob Faibussowitsch break; 2670d71ae5a4SJacob Faibussowitsch default: 2671d71ae5a4SJacob Faibussowitsch break; 26724222ddf1SHong Zhang } 26733ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26744222ddf1SHong Zhang } 2675