xref: /petsc/src/mat/impls/dense/mpi/mpidense.c (revision 6718818e67c4802797f2feae43fc3d52878b6955)
1be1d678aSKris Buschelman 
2ed3cc1f0SBarry Smith /*
3ed3cc1f0SBarry Smith    Basic functions for basic parallel dense matrices.
4ed3cc1f0SBarry Smith */
5ed3cc1f0SBarry Smith 
6c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h>    /*I   "petscmat.h"  I*/
78949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h>
8baa3c1c6SHong Zhang #include <petscblaslapack.h>
98965ea79SLois Curfman McInnes 
10ab92ecdeSBarry Smith /*@
11ab92ecdeSBarry Smith 
12ab92ecdeSBarry Smith       MatDenseGetLocalMatrix - For a MATMPIDENSE or MATSEQDENSE matrix returns the sequential
13ab92ecdeSBarry Smith               matrix that represents the operator. For sequential matrices it returns itself.
14ab92ecdeSBarry Smith 
15ab92ecdeSBarry Smith     Input Parameter:
16ab92ecdeSBarry Smith .      A - the Seq or MPI dense matrix
17ab92ecdeSBarry Smith 
18ab92ecdeSBarry Smith     Output Parameter:
19ab92ecdeSBarry Smith .      B - the inner matrix
20ab92ecdeSBarry Smith 
218e6c10adSSatish Balay     Level: intermediate
228e6c10adSSatish Balay 
23ab92ecdeSBarry Smith @*/
24ab92ecdeSBarry Smith PetscErrorCode MatDenseGetLocalMatrix(Mat A,Mat *B)
25ab92ecdeSBarry Smith {
26ab92ecdeSBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
27ab92ecdeSBarry Smith   PetscErrorCode ierr;
28ace3abfcSBarry Smith   PetscBool      flg;
29ab92ecdeSBarry Smith 
30ab92ecdeSBarry Smith   PetscFunctionBegin;
31d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
32d5ea218eSStefano Zampini   PetscValidPointer(B,2);
33251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIDENSE,&flg);CHKERRQ(ierr);
342205254eSKarl Rupp   if (flg) *B = mat->A;
352205254eSKarl Rupp   else *B = A;
36ab92ecdeSBarry Smith   PetscFunctionReturn(0);
37ab92ecdeSBarry Smith }
38ab92ecdeSBarry Smith 
39ba8c8a56SBarry Smith PetscErrorCode MatGetRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
40ba8c8a56SBarry Smith {
41ba8c8a56SBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
42ba8c8a56SBarry Smith   PetscErrorCode ierr;
43d0f46423SBarry Smith   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
44ba8c8a56SBarry Smith 
45ba8c8a56SBarry Smith   PetscFunctionBegin;
46e7e72b3dSBarry Smith   if (row < rstart || row >= rend) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
47ba8c8a56SBarry Smith   lrow = row - rstart;
48ba8c8a56SBarry Smith   ierr = MatGetRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v);CHKERRQ(ierr);
49ba8c8a56SBarry Smith   PetscFunctionReturn(0);
50ba8c8a56SBarry Smith }
51ba8c8a56SBarry Smith 
52637a0070SStefano Zampini PetscErrorCode MatRestoreRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
53ba8c8a56SBarry Smith {
54637a0070SStefano Zampini   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
55ba8c8a56SBarry Smith   PetscErrorCode ierr;
56637a0070SStefano Zampini   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
57ba8c8a56SBarry Smith 
58ba8c8a56SBarry Smith   PetscFunctionBegin;
59637a0070SStefano Zampini   if (row < rstart || row >= rend) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
60637a0070SStefano Zampini   lrow = row - rstart;
61637a0070SStefano Zampini   ierr = MatRestoreRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v);CHKERRQ(ierr);
62ba8c8a56SBarry Smith   PetscFunctionReturn(0);
63ba8c8a56SBarry Smith }
64ba8c8a56SBarry Smith 
6511bd1e4dSLisandro Dalcin PetscErrorCode  MatGetDiagonalBlock_MPIDense(Mat A,Mat *a)
660de54da6SSatish Balay {
670de54da6SSatish Balay   Mat_MPIDense   *mdn = (Mat_MPIDense*)A->data;
686849ba73SBarry Smith   PetscErrorCode ierr;
69d0f46423SBarry Smith   PetscInt       m = A->rmap->n,rstart = A->rmap->rstart;
7087828ca2SBarry Smith   PetscScalar    *array;
710de54da6SSatish Balay   MPI_Comm       comm;
724b6ae80fSStefano Zampini   PetscBool      flg;
7311bd1e4dSLisandro Dalcin   Mat            B;
740de54da6SSatish Balay 
750de54da6SSatish Balay   PetscFunctionBegin;
764b6ae80fSStefano Zampini   ierr = MatHasCongruentLayouts(A,&flg);CHKERRQ(ierr);
774b6ae80fSStefano Zampini   if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only square matrices supported.");
7811bd1e4dSLisandro Dalcin   ierr = PetscObjectQuery((PetscObject)A,"DiagonalBlock",(PetscObject*)&B);CHKERRQ(ierr);
794b6ae80fSStefano Zampini   if (!B) { /* This should use a new function, e.g. MatDenseGetSubMatrix (not create) */
804b6ae80fSStefano Zampini 
814b6ae80fSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)mdn->A,MATSEQDENSECUDA,&flg);CHKERRQ(ierr);
824b6ae80fSStefano Zampini     if (flg) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature",MATSEQDENSECUDA);
830de54da6SSatish Balay     ierr = PetscObjectGetComm((PetscObject)(mdn->A),&comm);CHKERRQ(ierr);
8411bd1e4dSLisandro Dalcin     ierr = MatCreate(comm,&B);CHKERRQ(ierr);
8511bd1e4dSLisandro Dalcin     ierr = MatSetSizes(B,m,m,m,m);CHKERRQ(ierr);
8611bd1e4dSLisandro Dalcin     ierr = MatSetType(B,((PetscObject)mdn->A)->type_name);CHKERRQ(ierr);
874b6ae80fSStefano Zampini     ierr = MatDenseGetArrayRead(mdn->A,(const PetscScalar**)&array);CHKERRQ(ierr);
8811bd1e4dSLisandro Dalcin     ierr = MatSeqDenseSetPreallocation(B,array+m*rstart);CHKERRQ(ierr);
894b6ae80fSStefano Zampini     ierr = MatDenseRestoreArrayRead(mdn->A,(const PetscScalar**)&array);CHKERRQ(ierr);
9011bd1e4dSLisandro Dalcin     ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
9111bd1e4dSLisandro Dalcin     ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
9211bd1e4dSLisandro Dalcin     ierr = PetscObjectCompose((PetscObject)A,"DiagonalBlock",(PetscObject)B);CHKERRQ(ierr);
9311bd1e4dSLisandro Dalcin     *a   = B;
9411bd1e4dSLisandro Dalcin     ierr = MatDestroy(&B);CHKERRQ(ierr);
952205254eSKarl Rupp   } else *a = B;
960de54da6SSatish Balay   PetscFunctionReturn(0);
970de54da6SSatish Balay }
980de54da6SSatish Balay 
9913f74950SBarry Smith PetscErrorCode MatSetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],const PetscScalar v[],InsertMode addv)
1008965ea79SLois Curfman McInnes {
10139b7565bSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)mat->data;
102dfbe8321SBarry Smith   PetscErrorCode ierr;
103d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
104ace3abfcSBarry Smith   PetscBool      roworiented = A->roworiented;
1058965ea79SLois Curfman McInnes 
1063a40ed3dSBarry Smith   PetscFunctionBegin;
1078965ea79SLois Curfman McInnes   for (i=0; i<m; i++) {
1085ef9f2a5SBarry Smith     if (idxm[i] < 0) continue;
109e32f2f54SBarry Smith     if (idxm[i] >= mat->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
1108965ea79SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
1118965ea79SLois Curfman McInnes       row = idxm[i] - rstart;
11239b7565bSBarry Smith       if (roworiented) {
11339b7565bSBarry Smith         ierr = MatSetValues(A->A,1,&row,n,idxn,v+i*n,addv);CHKERRQ(ierr);
1143a40ed3dSBarry Smith       } else {
1158965ea79SLois Curfman McInnes         for (j=0; j<n; j++) {
1165ef9f2a5SBarry Smith           if (idxn[j] < 0) continue;
117e32f2f54SBarry Smith           if (idxn[j] >= mat->cmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
11839b7565bSBarry Smith           ierr = MatSetValues(A->A,1,&row,1,&idxn[j],v+i+j*m,addv);CHKERRQ(ierr);
11939b7565bSBarry Smith         }
1208965ea79SLois Curfman McInnes       }
1212205254eSKarl Rupp     } else if (!A->donotstash) {
1225080c13bSMatthew G Knepley       mat->assembled = PETSC_FALSE;
12339b7565bSBarry Smith       if (roworiented) {
124b400d20cSBarry Smith         ierr = MatStashValuesRow_Private(&mat->stash,idxm[i],n,idxn,v+i*n,PETSC_FALSE);CHKERRQ(ierr);
125d36fbae8SSatish Balay       } else {
126b400d20cSBarry Smith         ierr = MatStashValuesCol_Private(&mat->stash,idxm[i],n,idxn,v+i,m,PETSC_FALSE);CHKERRQ(ierr);
12739b7565bSBarry Smith       }
128b49de8d1SLois Curfman McInnes     }
129b49de8d1SLois Curfman McInnes   }
1303a40ed3dSBarry Smith   PetscFunctionReturn(0);
131b49de8d1SLois Curfman McInnes }
132b49de8d1SLois Curfman McInnes 
13313f74950SBarry Smith PetscErrorCode MatGetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],PetscScalar v[])
134b49de8d1SLois Curfman McInnes {
135b49de8d1SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
136dfbe8321SBarry Smith   PetscErrorCode ierr;
137d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
138b49de8d1SLois Curfman McInnes 
1393a40ed3dSBarry Smith   PetscFunctionBegin;
140b49de8d1SLois Curfman McInnes   for (i=0; i<m; i++) {
141e32f2f54SBarry Smith     if (idxm[i] < 0) continue; /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative row"); */
142e32f2f54SBarry Smith     if (idxm[i] >= mat->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
143b49de8d1SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
144b49de8d1SLois Curfman McInnes       row = idxm[i] - rstart;
145b49de8d1SLois Curfman McInnes       for (j=0; j<n; j++) {
146e32f2f54SBarry Smith         if (idxn[j] < 0) continue; /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative column"); */
147e7e72b3dSBarry Smith         if (idxn[j] >= mat->cmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
148b49de8d1SLois Curfman McInnes         ierr = MatGetValues(mdn->A,1,&row,1,&idxn[j],v+i*n+j);CHKERRQ(ierr);
149b49de8d1SLois Curfman McInnes       }
150e7e72b3dSBarry Smith     } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only local values currently supported");
1518965ea79SLois Curfman McInnes   }
1523a40ed3dSBarry Smith   PetscFunctionReturn(0);
1538965ea79SLois Curfman McInnes }
1548965ea79SLois Curfman McInnes 
15549a6ff4bSBarry Smith static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A,PetscInt *lda)
15649a6ff4bSBarry Smith {
15749a6ff4bSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
15849a6ff4bSBarry Smith   PetscErrorCode ierr;
15949a6ff4bSBarry Smith 
16049a6ff4bSBarry Smith   PetscFunctionBegin;
16149a6ff4bSBarry Smith   ierr = MatDenseGetLDA(a->A,lda);CHKERRQ(ierr);
16249a6ff4bSBarry Smith   PetscFunctionReturn(0);
16349a6ff4bSBarry Smith }
16449a6ff4bSBarry Smith 
165ad16ce7aSStefano Zampini static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A,PetscInt lda)
166ad16ce7aSStefano Zampini {
167ad16ce7aSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
168ad16ce7aSStefano Zampini   PetscErrorCode ierr;
169ad16ce7aSStefano Zampini 
170ad16ce7aSStefano Zampini   PetscFunctionBegin;
171ad16ce7aSStefano Zampini   ierr = MatDenseSetLDA(a->A,lda);CHKERRQ(ierr);
172ad16ce7aSStefano Zampini   PetscFunctionReturn(0);
173ad16ce7aSStefano Zampini }
174ad16ce7aSStefano Zampini 
175637a0070SStefano Zampini static PetscErrorCode MatDenseGetArray_MPIDense(Mat A,PetscScalar **array)
176ff14e315SSatish Balay {
177ff14e315SSatish Balay   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
178dfbe8321SBarry Smith   PetscErrorCode ierr;
179ff14e315SSatish Balay 
1803a40ed3dSBarry Smith   PetscFunctionBegin;
1818c778c55SBarry Smith   ierr = MatDenseGetArray(a->A,array);CHKERRQ(ierr);
1823a40ed3dSBarry Smith   PetscFunctionReturn(0);
183ff14e315SSatish Balay }
184ff14e315SSatish Balay 
185637a0070SStefano Zampini static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A,const PetscScalar **array)
1868572280aSBarry Smith {
1878572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
1888572280aSBarry Smith   PetscErrorCode ierr;
1898572280aSBarry Smith 
1908572280aSBarry Smith   PetscFunctionBegin;
1918572280aSBarry Smith   ierr = MatDenseGetArrayRead(a->A,array);CHKERRQ(ierr);
1928572280aSBarry Smith   PetscFunctionReturn(0);
1938572280aSBarry Smith }
1948572280aSBarry Smith 
1956947451fSStefano Zampini static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A,PetscScalar **array)
1966947451fSStefano Zampini {
1976947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
1986947451fSStefano Zampini   PetscErrorCode ierr;
1996947451fSStefano Zampini 
2006947451fSStefano Zampini   PetscFunctionBegin;
2016947451fSStefano Zampini   ierr = MatDenseGetArrayWrite(a->A,array);CHKERRQ(ierr);
2026947451fSStefano Zampini   PetscFunctionReturn(0);
2036947451fSStefano Zampini }
2046947451fSStefano Zampini 
205637a0070SStefano Zampini static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A,const PetscScalar *array)
206d3042a70SBarry Smith {
207d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
208d3042a70SBarry Smith   PetscErrorCode ierr;
209d3042a70SBarry Smith 
210d3042a70SBarry Smith   PetscFunctionBegin;
2116947451fSStefano Zampini   if (a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec first");
212d3042a70SBarry Smith   ierr = MatDensePlaceArray(a->A,array);CHKERRQ(ierr);
213d3042a70SBarry Smith   PetscFunctionReturn(0);
214d3042a70SBarry Smith }
215d3042a70SBarry Smith 
216d3042a70SBarry Smith static PetscErrorCode MatDenseResetArray_MPIDense(Mat A)
217d3042a70SBarry Smith {
218d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
219d3042a70SBarry Smith   PetscErrorCode ierr;
220d3042a70SBarry Smith 
221d3042a70SBarry Smith   PetscFunctionBegin;
2226947451fSStefano Zampini   if (a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec first");
223d3042a70SBarry Smith   ierr = MatDenseResetArray(a->A);CHKERRQ(ierr);
224d3042a70SBarry Smith   PetscFunctionReturn(0);
225d3042a70SBarry Smith }
226d3042a70SBarry Smith 
227d5ea218eSStefano Zampini static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A,const PetscScalar *array)
228d5ea218eSStefano Zampini {
229d5ea218eSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
230d5ea218eSStefano Zampini   PetscErrorCode ierr;
231d5ea218eSStefano Zampini 
232d5ea218eSStefano Zampini   PetscFunctionBegin;
233d5ea218eSStefano Zampini   if (a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec first");
234d5ea218eSStefano Zampini   ierr = MatDenseReplaceArray(a->A,array);CHKERRQ(ierr);
235d5ea218eSStefano Zampini   PetscFunctionReturn(0);
236d5ea218eSStefano Zampini }
237d5ea218eSStefano Zampini 
2387dae84e0SHong Zhang static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B)
239ca3fa75bSLois Curfman McInnes {
240ca3fa75bSLois Curfman McInnes   Mat_MPIDense      *mat  = (Mat_MPIDense*)A->data,*newmatd;
2416849ba73SBarry Smith   PetscErrorCode    ierr;
242637a0070SStefano Zampini   PetscInt          lda,i,j,rstart,rend,nrows,ncols,Ncols,nlrows,nlcols;
2435d0c19d7SBarry Smith   const PetscInt    *irow,*icol;
244637a0070SStefano Zampini   const PetscScalar *v;
245637a0070SStefano Zampini   PetscScalar       *bv;
246ca3fa75bSLois Curfman McInnes   Mat               newmat;
2474aa3045dSJed Brown   IS                iscol_local;
24842a884f0SBarry Smith   MPI_Comm          comm_is,comm_mat;
249ca3fa75bSLois Curfman McInnes 
250ca3fa75bSLois Curfman McInnes   PetscFunctionBegin;
25142a884f0SBarry Smith   ierr = PetscObjectGetComm((PetscObject)A,&comm_mat);CHKERRQ(ierr);
25242a884f0SBarry Smith   ierr = PetscObjectGetComm((PetscObject)iscol,&comm_is);CHKERRQ(ierr);
25342a884f0SBarry Smith   if (comm_mat != comm_is) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"IS communicator must match matrix communicator");
25442a884f0SBarry Smith 
2554aa3045dSJed Brown   ierr = ISAllGather(iscol,&iscol_local);CHKERRQ(ierr);
256ca3fa75bSLois Curfman McInnes   ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr);
2574aa3045dSJed Brown   ierr = ISGetIndices(iscol_local,&icol);CHKERRQ(ierr);
258b9b97703SBarry Smith   ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr);
259b9b97703SBarry Smith   ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr);
2604aa3045dSJed Brown   ierr = ISGetSize(iscol,&Ncols);CHKERRQ(ierr); /* global number of columns, size of iscol_local */
261ca3fa75bSLois Curfman McInnes 
262ca3fa75bSLois Curfman McInnes   /* No parallel redistribution currently supported! Should really check each index set
2637eba5e9cSLois Curfman McInnes      to comfirm that it is OK.  ... Currently supports only submatrix same partitioning as
2647eba5e9cSLois Curfman McInnes      original matrix! */
265ca3fa75bSLois Curfman McInnes 
266ca3fa75bSLois Curfman McInnes   ierr = MatGetLocalSize(A,&nlrows,&nlcols);CHKERRQ(ierr);
2677eba5e9cSLois Curfman McInnes   ierr = MatGetOwnershipRange(A,&rstart,&rend);CHKERRQ(ierr);
268ca3fa75bSLois Curfman McInnes 
269ca3fa75bSLois Curfman McInnes   /* Check submatrix call */
270ca3fa75bSLois Curfman McInnes   if (scall == MAT_REUSE_MATRIX) {
271e32f2f54SBarry Smith     /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */
2727eba5e9cSLois Curfman McInnes     /* Really need to test rows and column sizes! */
273ca3fa75bSLois Curfman McInnes     newmat = *B;
274ca3fa75bSLois Curfman McInnes   } else {
275ca3fa75bSLois Curfman McInnes     /* Create and fill new matrix */
276ce94432eSBarry Smith     ierr = MatCreate(PetscObjectComm((PetscObject)A),&newmat);CHKERRQ(ierr);
2774aa3045dSJed Brown     ierr = MatSetSizes(newmat,nrows,ncols,PETSC_DECIDE,Ncols);CHKERRQ(ierr);
2787adad957SLisandro Dalcin     ierr = MatSetType(newmat,((PetscObject)A)->type_name);CHKERRQ(ierr);
2790298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(newmat,NULL);CHKERRQ(ierr);
280ca3fa75bSLois Curfman McInnes   }
281ca3fa75bSLois Curfman McInnes 
282ca3fa75bSLois Curfman McInnes   /* Now extract the data pointers and do the copy, column at a time */
283ca3fa75bSLois Curfman McInnes   newmatd = (Mat_MPIDense*)newmat->data;
284637a0070SStefano Zampini   ierr = MatDenseGetArray(newmatd->A,&bv);CHKERRQ(ierr);
285637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(mat->A,&v);CHKERRQ(ierr);
286637a0070SStefano Zampini   ierr = MatDenseGetLDA(mat->A,&lda);CHKERRQ(ierr);
2874aa3045dSJed Brown   for (i=0; i<Ncols; i++) {
288637a0070SStefano Zampini     const PetscScalar *av = v + lda*icol[i];
289ca3fa75bSLois Curfman McInnes     for (j=0; j<nrows; j++) {
2907eba5e9cSLois Curfman McInnes       *bv++ = av[irow[j] - rstart];
291ca3fa75bSLois Curfman McInnes     }
292ca3fa75bSLois Curfman McInnes   }
293637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(mat->A,&v);CHKERRQ(ierr);
294637a0070SStefano Zampini   ierr = MatDenseRestoreArray(newmatd->A,&bv);CHKERRQ(ierr);
295ca3fa75bSLois Curfman McInnes 
296ca3fa75bSLois Curfman McInnes   /* Assemble the matrices so that the correct flags are set */
297ca3fa75bSLois Curfman McInnes   ierr = MatAssemblyBegin(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
298ca3fa75bSLois Curfman McInnes   ierr = MatAssemblyEnd(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
299ca3fa75bSLois Curfman McInnes 
300ca3fa75bSLois Curfman McInnes   /* Free work space */
301ca3fa75bSLois Curfman McInnes   ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr);
3025bdf786aSShri Abhyankar   ierr = ISRestoreIndices(iscol_local,&icol);CHKERRQ(ierr);
30332bb1f2dSLisandro Dalcin   ierr = ISDestroy(&iscol_local);CHKERRQ(ierr);
304ca3fa75bSLois Curfman McInnes   *B   = newmat;
305ca3fa75bSLois Curfman McInnes   PetscFunctionReturn(0);
306ca3fa75bSLois Curfman McInnes }
307ca3fa75bSLois Curfman McInnes 
308637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A,PetscScalar **array)
309ff14e315SSatish Balay {
31073a71a0fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
31173a71a0fSBarry Smith   PetscErrorCode ierr;
31273a71a0fSBarry Smith 
3133a40ed3dSBarry Smith   PetscFunctionBegin;
3148c778c55SBarry Smith   ierr = MatDenseRestoreArray(a->A,array);CHKERRQ(ierr);
3153a40ed3dSBarry Smith   PetscFunctionReturn(0);
316ff14e315SSatish Balay }
317ff14e315SSatish Balay 
318637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A,const PetscScalar **array)
3198572280aSBarry Smith {
3208572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3218572280aSBarry Smith   PetscErrorCode ierr;
3228572280aSBarry Smith 
3238572280aSBarry Smith   PetscFunctionBegin;
3248572280aSBarry Smith   ierr = MatDenseRestoreArrayRead(a->A,array);CHKERRQ(ierr);
3258572280aSBarry Smith   PetscFunctionReturn(0);
3268572280aSBarry Smith }
3278572280aSBarry Smith 
3286947451fSStefano Zampini PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A,PetscScalar **array)
3296947451fSStefano Zampini {
3306947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3316947451fSStefano Zampini   PetscErrorCode ierr;
3326947451fSStefano Zampini 
3336947451fSStefano Zampini   PetscFunctionBegin;
3346947451fSStefano Zampini   ierr = MatDenseRestoreArrayWrite(a->A,array);CHKERRQ(ierr);
3356947451fSStefano Zampini   PetscFunctionReturn(0);
3366947451fSStefano Zampini }
3376947451fSStefano Zampini 
338dfbe8321SBarry Smith PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat,MatAssemblyType mode)
3398965ea79SLois Curfman McInnes {
34039ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
341dfbe8321SBarry Smith   PetscErrorCode ierr;
34213f74950SBarry Smith   PetscInt       nstash,reallocs;
3438965ea79SLois Curfman McInnes 
3443a40ed3dSBarry Smith   PetscFunctionBegin;
345910cf402Sprj-   if (mdn->donotstash || mat->nooffprocentries) return(0);
3468965ea79SLois Curfman McInnes 
347d0f46423SBarry Smith   ierr = MatStashScatterBegin_Private(mat,&mat->stash,mat->rmap->range);CHKERRQ(ierr);
3488798bf22SSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
349ae15b995SBarry Smith   ierr = PetscInfo2(mdn->A,"Stash has %D entries, uses %D mallocs.\n",nstash,reallocs);CHKERRQ(ierr);
3503a40ed3dSBarry Smith   PetscFunctionReturn(0);
3518965ea79SLois Curfman McInnes }
3528965ea79SLois Curfman McInnes 
353dfbe8321SBarry Smith PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat,MatAssemblyType mode)
3548965ea79SLois Curfman McInnes {
35539ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn=(Mat_MPIDense*)mat->data;
3566849ba73SBarry Smith   PetscErrorCode ierr;
35713f74950SBarry Smith   PetscInt       i,*row,*col,flg,j,rstart,ncols;
35813f74950SBarry Smith   PetscMPIInt    n;
35987828ca2SBarry Smith   PetscScalar    *val;
3608965ea79SLois Curfman McInnes 
3613a40ed3dSBarry Smith   PetscFunctionBegin;
362910cf402Sprj-   if (!mdn->donotstash && !mat->nooffprocentries) {
3638965ea79SLois Curfman McInnes     /*  wait on receives */
3647ef1d9bdSSatish Balay     while (1) {
3658798bf22SSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
3667ef1d9bdSSatish Balay       if (!flg) break;
3678965ea79SLois Curfman McInnes 
3687ef1d9bdSSatish Balay       for (i=0; i<n;) {
3697ef1d9bdSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
3702205254eSKarl Rupp         for (j=i,rstart=row[j]; j<n; j++) {
3712205254eSKarl Rupp           if (row[j] != rstart) break;
3722205254eSKarl Rupp         }
3737ef1d9bdSSatish Balay         if (j < n) ncols = j-i;
3747ef1d9bdSSatish Balay         else       ncols = n-i;
3757ef1d9bdSSatish Balay         /* Now assemble all these values with a single function call */
3764b4eb8d3SJed Brown         ierr = MatSetValues_MPIDense(mat,1,row+i,ncols,col+i,val+i,mat->insertmode);CHKERRQ(ierr);
3777ef1d9bdSSatish Balay         i    = j;
3788965ea79SLois Curfman McInnes       }
3797ef1d9bdSSatish Balay     }
3808798bf22SSatish Balay     ierr = MatStashScatterEnd_Private(&mat->stash);CHKERRQ(ierr);
381910cf402Sprj-   }
3828965ea79SLois Curfman McInnes 
38339ddd567SLois Curfman McInnes   ierr = MatAssemblyBegin(mdn->A,mode);CHKERRQ(ierr);
38439ddd567SLois Curfman McInnes   ierr = MatAssemblyEnd(mdn->A,mode);CHKERRQ(ierr);
3858965ea79SLois Curfman McInnes 
3866d4a8577SBarry Smith   if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) {
38739ddd567SLois Curfman McInnes     ierr = MatSetUpMultiply_MPIDense(mat);CHKERRQ(ierr);
3888965ea79SLois Curfman McInnes   }
3893a40ed3dSBarry Smith   PetscFunctionReturn(0);
3908965ea79SLois Curfman McInnes }
3918965ea79SLois Curfman McInnes 
392dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_MPIDense(Mat A)
3938965ea79SLois Curfman McInnes {
394dfbe8321SBarry Smith   PetscErrorCode ierr;
39539ddd567SLois Curfman McInnes   Mat_MPIDense   *l = (Mat_MPIDense*)A->data;
3963a40ed3dSBarry Smith 
3973a40ed3dSBarry Smith   PetscFunctionBegin;
3983a40ed3dSBarry Smith   ierr = MatZeroEntries(l->A);CHKERRQ(ierr);
3993a40ed3dSBarry Smith   PetscFunctionReturn(0);
4008965ea79SLois Curfman McInnes }
4018965ea79SLois Curfman McInnes 
402637a0070SStefano Zampini PetscErrorCode MatZeroRows_MPIDense(Mat A,PetscInt n,const PetscInt rows[],PetscScalar diag,Vec x,Vec b)
4038965ea79SLois Curfman McInnes {
40439ddd567SLois Curfman McInnes   Mat_MPIDense      *l = (Mat_MPIDense*)A->data;
4056849ba73SBarry Smith   PetscErrorCode    ierr;
406637a0070SStefano Zampini   PetscInt          i,len,*lrows;
407637a0070SStefano Zampini 
408637a0070SStefano Zampini   PetscFunctionBegin;
409637a0070SStefano Zampini   /* get locally owned rows */
410637a0070SStefano Zampini   ierr = PetscLayoutMapLocal(A->rmap,n,rows,&len,&lrows,NULL);CHKERRQ(ierr);
411637a0070SStefano Zampini   /* fix right hand side if needed */
412637a0070SStefano Zampini   if (x && b) {
41397b48c8fSBarry Smith     const PetscScalar *xx;
41497b48c8fSBarry Smith     PetscScalar       *bb;
4158965ea79SLois Curfman McInnes 
41697b48c8fSBarry Smith     ierr = VecGetArrayRead(x, &xx);CHKERRQ(ierr);
417637a0070SStefano Zampini     ierr = VecGetArrayWrite(b, &bb);CHKERRQ(ierr);
418637a0070SStefano Zampini     for (i=0;i<len;++i) bb[lrows[i]] = diag*xx[lrows[i]];
41997b48c8fSBarry Smith     ierr = VecRestoreArrayRead(x, &xx);CHKERRQ(ierr);
420637a0070SStefano Zampini     ierr = VecRestoreArrayWrite(b, &bb);CHKERRQ(ierr);
42197b48c8fSBarry Smith   }
422637a0070SStefano Zampini   ierr = MatZeroRows(l->A,len,lrows,0.0,NULL,NULL);CHKERRQ(ierr);
423e2eb51b1SBarry Smith   if (diag != 0.0) {
424637a0070SStefano Zampini     Vec d;
425b9679d65SBarry Smith 
426637a0070SStefano Zampini     ierr = MatCreateVecs(A,NULL,&d);CHKERRQ(ierr);
427637a0070SStefano Zampini     ierr = VecSet(d,diag);CHKERRQ(ierr);
428637a0070SStefano Zampini     ierr = MatDiagonalSet(A,d,INSERT_VALUES);CHKERRQ(ierr);
429637a0070SStefano Zampini     ierr = VecDestroy(&d);CHKERRQ(ierr);
430b9679d65SBarry Smith   }
431606d414cSSatish Balay   ierr = PetscFree(lrows);CHKERRQ(ierr);
4323a40ed3dSBarry Smith   PetscFunctionReturn(0);
4338965ea79SLois Curfman McInnes }
4348965ea79SLois Curfman McInnes 
435cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat,Vec,Vec);
436cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat,Vec,Vec,Vec);
437cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat,Vec,Vec);
438cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat,Vec,Vec,Vec);
439cc2e6a90SBarry Smith 
440dfbe8321SBarry Smith PetscErrorCode MatMult_MPIDense(Mat mat,Vec xx,Vec yy)
4418965ea79SLois Curfman McInnes {
44239ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
443dfbe8321SBarry Smith   PetscErrorCode    ierr;
444637a0070SStefano Zampini   const PetscScalar *ax;
445637a0070SStefano Zampini   PetscScalar       *ay;
446c456f294SBarry Smith 
4473a40ed3dSBarry Smith   PetscFunctionBegin;
448637a0070SStefano Zampini   ierr = VecGetArrayReadInPlace(xx,&ax);CHKERRQ(ierr);
449637a0070SStefano Zampini   ierr = VecGetArrayInPlace(mdn->lvec,&ay);CHKERRQ(ierr);
450637a0070SStefano Zampini   ierr = PetscSFBcastBegin(mdn->Mvctx,MPIU_SCALAR,ax,ay);CHKERRQ(ierr);
451637a0070SStefano Zampini   ierr = PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay);CHKERRQ(ierr);
452637a0070SStefano Zampini   ierr = VecRestoreArrayInPlace(mdn->lvec,&ay);CHKERRQ(ierr);
453637a0070SStefano Zampini   ierr = VecRestoreArrayReadInPlace(xx,&ax);CHKERRQ(ierr);
454637a0070SStefano Zampini   ierr = (*mdn->A->ops->mult)(mdn->A,mdn->lvec,yy);CHKERRQ(ierr);
4553a40ed3dSBarry Smith   PetscFunctionReturn(0);
4568965ea79SLois Curfman McInnes }
4578965ea79SLois Curfman McInnes 
458dfbe8321SBarry Smith PetscErrorCode MatMultAdd_MPIDense(Mat mat,Vec xx,Vec yy,Vec zz)
4598965ea79SLois Curfman McInnes {
46039ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
461dfbe8321SBarry Smith   PetscErrorCode    ierr;
462637a0070SStefano Zampini   const PetscScalar *ax;
463637a0070SStefano Zampini   PetscScalar       *ay;
464c456f294SBarry Smith 
4653a40ed3dSBarry Smith   PetscFunctionBegin;
466637a0070SStefano Zampini   ierr = VecGetArrayReadInPlace(xx,&ax);CHKERRQ(ierr);
467637a0070SStefano Zampini   ierr = VecGetArrayInPlace(mdn->lvec,&ay);CHKERRQ(ierr);
468637a0070SStefano Zampini   ierr = PetscSFBcastBegin(mdn->Mvctx,MPIU_SCALAR,ax,ay);CHKERRQ(ierr);
469637a0070SStefano Zampini   ierr = PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay);CHKERRQ(ierr);
470637a0070SStefano Zampini   ierr = VecRestoreArrayInPlace(mdn->lvec,&ay);CHKERRQ(ierr);
471637a0070SStefano Zampini   ierr = VecRestoreArrayReadInPlace(xx,&ax);CHKERRQ(ierr);
472637a0070SStefano Zampini   ierr = (*mdn->A->ops->multadd)(mdn->A,mdn->lvec,yy,zz);CHKERRQ(ierr);
4733a40ed3dSBarry Smith   PetscFunctionReturn(0);
4748965ea79SLois Curfman McInnes }
4758965ea79SLois Curfman McInnes 
476dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_MPIDense(Mat A,Vec xx,Vec yy)
477096963f5SLois Curfman McInnes {
478096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
479dfbe8321SBarry Smith   PetscErrorCode    ierr;
480637a0070SStefano Zampini   const PetscScalar *ax;
481637a0070SStefano Zampini   PetscScalar       *ay;
482096963f5SLois Curfman McInnes 
4833a40ed3dSBarry Smith   PetscFunctionBegin;
484637a0070SStefano Zampini   ierr = VecSet(yy,0.0);CHKERRQ(ierr);
485637a0070SStefano Zampini   ierr = (*a->A->ops->multtranspose)(a->A,xx,a->lvec);CHKERRQ(ierr);
486637a0070SStefano Zampini   ierr = VecGetArrayReadInPlace(a->lvec,&ax);CHKERRQ(ierr);
487637a0070SStefano Zampini   ierr = VecGetArrayInPlace(yy,&ay);CHKERRQ(ierr);
488637a0070SStefano Zampini   ierr = PetscSFReduceBegin(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM);CHKERRQ(ierr);
489637a0070SStefano Zampini   ierr = PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM);CHKERRQ(ierr);
490637a0070SStefano Zampini   ierr = VecRestoreArrayReadInPlace(a->lvec,&ax);CHKERRQ(ierr);
491637a0070SStefano Zampini   ierr = VecRestoreArrayInPlace(yy,&ay);CHKERRQ(ierr);
4923a40ed3dSBarry Smith   PetscFunctionReturn(0);
493096963f5SLois Curfman McInnes }
494096963f5SLois Curfman McInnes 
495dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A,Vec xx,Vec yy,Vec zz)
496096963f5SLois Curfman McInnes {
497096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
498dfbe8321SBarry Smith   PetscErrorCode    ierr;
499637a0070SStefano Zampini   const PetscScalar *ax;
500637a0070SStefano Zampini   PetscScalar       *ay;
501096963f5SLois Curfman McInnes 
5023a40ed3dSBarry Smith   PetscFunctionBegin;
5033501a2bdSLois Curfman McInnes   ierr = VecCopy(yy,zz);CHKERRQ(ierr);
504637a0070SStefano Zampini   ierr = (*a->A->ops->multtranspose)(a->A,xx,a->lvec);CHKERRQ(ierr);
505637a0070SStefano Zampini   ierr = VecGetArrayReadInPlace(a->lvec,&ax);CHKERRQ(ierr);
506637a0070SStefano Zampini   ierr = VecGetArrayInPlace(zz,&ay);CHKERRQ(ierr);
507637a0070SStefano Zampini   ierr = PetscSFReduceBegin(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM);CHKERRQ(ierr);
508637a0070SStefano Zampini   ierr = PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM);CHKERRQ(ierr);
509637a0070SStefano Zampini   ierr = VecRestoreArrayReadInPlace(a->lvec,&ax);CHKERRQ(ierr);
510637a0070SStefano Zampini   ierr = VecRestoreArrayInPlace(zz,&ay);CHKERRQ(ierr);
5113a40ed3dSBarry Smith   PetscFunctionReturn(0);
512096963f5SLois Curfman McInnes }
513096963f5SLois Curfman McInnes 
514dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_MPIDense(Mat A,Vec v)
5158965ea79SLois Curfman McInnes {
51639ddd567SLois Curfman McInnes   Mat_MPIDense      *a    = (Mat_MPIDense*)A->data;
517dfbe8321SBarry Smith   PetscErrorCode    ierr;
518637a0070SStefano Zampini   PetscInt          lda,len,i,n,m = A->rmap->n,radd;
51987828ca2SBarry Smith   PetscScalar       *x,zero = 0.0;
520637a0070SStefano Zampini   const PetscScalar *av;
521ed3cc1f0SBarry Smith 
5223a40ed3dSBarry Smith   PetscFunctionBegin;
5232dcb1b2aSMatthew Knepley   ierr = VecSet(v,zero);CHKERRQ(ierr);
5241ebc52fbSHong Zhang   ierr = VecGetArray(v,&x);CHKERRQ(ierr);
525096963f5SLois Curfman McInnes   ierr = VecGetSize(v,&n);CHKERRQ(ierr);
526e32f2f54SBarry Smith   if (n != A->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Nonconforming mat and vec");
527d0f46423SBarry Smith   len  = PetscMin(a->A->rmap->n,a->A->cmap->n);
528d0f46423SBarry Smith   radd = A->rmap->rstart*m;
529637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(a->A,&av);CHKERRQ(ierr);
530637a0070SStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
53144cd7ae7SLois Curfman McInnes   for (i=0; i<len; i++) {
532637a0070SStefano Zampini     x[i] = av[radd + i*lda + i];
533096963f5SLois Curfman McInnes   }
534637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,&av);CHKERRQ(ierr);
5351ebc52fbSHong Zhang   ierr = VecRestoreArray(v,&x);CHKERRQ(ierr);
5363a40ed3dSBarry Smith   PetscFunctionReturn(0);
5378965ea79SLois Curfman McInnes }
5388965ea79SLois Curfman McInnes 
539dfbe8321SBarry Smith PetscErrorCode MatDestroy_MPIDense(Mat mat)
5408965ea79SLois Curfman McInnes {
5413501a2bdSLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
542dfbe8321SBarry Smith   PetscErrorCode ierr;
543ed3cc1f0SBarry Smith 
5443a40ed3dSBarry Smith   PetscFunctionBegin;
545aa482453SBarry Smith #if defined(PETSC_USE_LOG)
546d0f46423SBarry Smith   PetscLogObjectState((PetscObject)mat,"Rows=%D, Cols=%D",mat->rmap->N,mat->cmap->N);
5478965ea79SLois Curfman McInnes #endif
5488798bf22SSatish Balay   ierr = MatStashDestroy_Private(&mat->stash);CHKERRQ(ierr);
5496bf464f9SBarry Smith   ierr = MatDestroy(&mdn->A);CHKERRQ(ierr);
5506bf464f9SBarry Smith   ierr = VecDestroy(&mdn->lvec);CHKERRQ(ierr);
551637a0070SStefano Zampini   ierr = PetscSFDestroy(&mdn->Mvctx);CHKERRQ(ierr);
5526947451fSStefano Zampini   ierr = VecDestroy(&mdn->cvec);CHKERRQ(ierr);
55301b82886SBarry Smith 
554bf0cc555SLisandro Dalcin   ierr = PetscFree(mat->data);CHKERRQ(ierr);
555dbd8c25aSHong Zhang   ierr = PetscObjectChangeTypeName((PetscObject)mat,0);CHKERRQ(ierr);
5568baccfbdSHong Zhang 
55749a6ff4bSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",NULL);CHKERRQ(ierr);
558ad16ce7aSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",NULL);CHKERRQ(ierr);
5598baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",NULL);CHKERRQ(ierr);
5608572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",NULL);CHKERRQ(ierr);
5618572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",NULL);CHKERRQ(ierr);
5628572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",NULL);CHKERRQ(ierr);
5636947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",NULL);CHKERRQ(ierr);
5646947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",NULL);CHKERRQ(ierr);
565d3042a70SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",NULL);CHKERRQ(ierr);
566d3042a70SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",NULL);CHKERRQ(ierr);
567d5ea218eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",NULL);CHKERRQ(ierr);
5688baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
5698baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",NULL);CHKERRQ(ierr);
5708baccfbdSHong Zhang #endif
571bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",NULL);CHKERRQ(ierr);
5724222ddf1SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",NULL);CHKERRQ(ierr);
5734222ddf1SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",NULL);CHKERRQ(ierr);
574*6718818eSStefano Zampini #if defined (PETSC_HAVE_CUDA)
575*6718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",NULL);CHKERRQ(ierr);
576*6718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",NULL);CHKERRQ(ierr);
577*6718818eSStefano Zampini #endif
57886aefd0dSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",NULL);CHKERRQ(ierr);
57986aefd0dSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",NULL);CHKERRQ(ierr);
5806947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",NULL);CHKERRQ(ierr);
5816947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",NULL);CHKERRQ(ierr);
5826947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",NULL);CHKERRQ(ierr);
5836947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",NULL);CHKERRQ(ierr);
5846947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",NULL);CHKERRQ(ierr);
5856947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",NULL);CHKERRQ(ierr);
5863a40ed3dSBarry Smith   PetscFunctionReturn(0);
5878965ea79SLois Curfman McInnes }
58839ddd567SLois Curfman McInnes 
58952c5f739Sprj- PETSC_INTERN PetscErrorCode MatView_SeqDense(Mat,PetscViewer);
59052c5f739Sprj- 
5919804daf3SBarry Smith #include <petscdraw.h>
5926849ba73SBarry Smith static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
5938965ea79SLois Curfman McInnes {
59439ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
595dfbe8321SBarry Smith   PetscErrorCode    ierr;
5967da1fb6eSBarry Smith   PetscMPIInt       rank = mdn->rank;
59719fd82e9SBarry Smith   PetscViewerType   vtype;
598ace3abfcSBarry Smith   PetscBool         iascii,isdraw;
599b0a32e0cSBarry Smith   PetscViewer       sviewer;
600f3ef73ceSBarry Smith   PetscViewerFormat format;
6018965ea79SLois Curfman McInnes 
6023a40ed3dSBarry Smith   PetscFunctionBegin;
603251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
604251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr);
60532077d6dSBarry Smith   if (iascii) {
606b0a32e0cSBarry Smith     ierr = PetscViewerGetType(viewer,&vtype);CHKERRQ(ierr);
607b0a32e0cSBarry Smith     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
608456192e2SBarry Smith     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
6094e220ebcSLois Curfman McInnes       MatInfo info;
610888f2ed8SSatish Balay       ierr = MatGetInfo(mat,MAT_LOCAL,&info);CHKERRQ(ierr);
6111575c14dSBarry Smith       ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr);
6127b23a99aSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"  [%d] local rows %D nz %D nz alloced %D mem %D \n",rank,mat->rmap->n,(PetscInt)info.nz_used,(PetscInt)info.nz_allocated,(PetscInt)info.memory);CHKERRQ(ierr);
613b0a32e0cSBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
6141575c14dSBarry Smith       ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr);
615637a0070SStefano Zampini       ierr = PetscSFView(mdn->Mvctx,viewer);CHKERRQ(ierr);
6163a40ed3dSBarry Smith       PetscFunctionReturn(0);
617fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
6183a40ed3dSBarry Smith       PetscFunctionReturn(0);
6198965ea79SLois Curfman McInnes     }
620f1af5d2fSBarry Smith   } else if (isdraw) {
621b0a32e0cSBarry Smith     PetscDraw draw;
622ace3abfcSBarry Smith     PetscBool isnull;
623f1af5d2fSBarry Smith 
624b0a32e0cSBarry Smith     ierr = PetscViewerDrawGetDraw(viewer,0,&draw);CHKERRQ(ierr);
625b0a32e0cSBarry Smith     ierr = PetscDrawIsNull(draw,&isnull);CHKERRQ(ierr);
626f1af5d2fSBarry Smith     if (isnull) PetscFunctionReturn(0);
627f1af5d2fSBarry Smith   }
62877ed5343SBarry Smith 
6297da1fb6eSBarry Smith   {
6308965ea79SLois Curfman McInnes     /* assemble the entire matrix onto first processor. */
6318965ea79SLois Curfman McInnes     Mat         A;
632d0f46423SBarry Smith     PetscInt    M = mat->rmap->N,N = mat->cmap->N,m,row,i,nz;
633ba8c8a56SBarry Smith     PetscInt    *cols;
634ba8c8a56SBarry Smith     PetscScalar *vals;
6358965ea79SLois Curfman McInnes 
636ce94432eSBarry Smith     ierr = MatCreate(PetscObjectComm((PetscObject)mat),&A);CHKERRQ(ierr);
6378965ea79SLois Curfman McInnes     if (!rank) {
638f69a0ea3SMatthew Knepley       ierr = MatSetSizes(A,M,N,M,N);CHKERRQ(ierr);
6393a40ed3dSBarry Smith     } else {
640f69a0ea3SMatthew Knepley       ierr = MatSetSizes(A,0,0,M,N);CHKERRQ(ierr);
6418965ea79SLois Curfman McInnes     }
6427adad957SLisandro Dalcin     /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */
643878740d9SKris Buschelman     ierr = MatSetType(A,MATMPIDENSE);CHKERRQ(ierr);
6440298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(A,NULL);CHKERRQ(ierr);
6453bb1ff40SBarry Smith     ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)A);CHKERRQ(ierr);
6468965ea79SLois Curfman McInnes 
64739ddd567SLois Curfman McInnes     /* Copy the matrix ... This isn't the most efficient means,
64839ddd567SLois Curfman McInnes        but it's quick for now */
64951022da4SBarry Smith     A->insertmode = INSERT_VALUES;
6502205254eSKarl Rupp 
6512205254eSKarl Rupp     row = mat->rmap->rstart;
6522205254eSKarl Rupp     m   = mdn->A->rmap->n;
6538965ea79SLois Curfman McInnes     for (i=0; i<m; i++) {
654ba8c8a56SBarry Smith       ierr = MatGetRow_MPIDense(mat,row,&nz,&cols,&vals);CHKERRQ(ierr);
655ba8c8a56SBarry Smith       ierr = MatSetValues_MPIDense(A,1,&row,nz,cols,vals,INSERT_VALUES);CHKERRQ(ierr);
656ba8c8a56SBarry Smith       ierr = MatRestoreRow_MPIDense(mat,row,&nz,&cols,&vals);CHKERRQ(ierr);
65739ddd567SLois Curfman McInnes       row++;
6588965ea79SLois Curfman McInnes     }
6598965ea79SLois Curfman McInnes 
6606d4a8577SBarry Smith     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
6616d4a8577SBarry Smith     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
6623f08860eSBarry Smith     ierr = PetscViewerGetSubViewer(viewer,PETSC_COMM_SELF,&sviewer);CHKERRQ(ierr);
663b9b97703SBarry Smith     if (!rank) {
6641a9d3c3cSBarry Smith       ierr = PetscObjectSetName((PetscObject)((Mat_MPIDense*)(A->data))->A,((PetscObject)mat)->name);CHKERRQ(ierr);
6657da1fb6eSBarry Smith       ierr = MatView_SeqDense(((Mat_MPIDense*)(A->data))->A,sviewer);CHKERRQ(ierr);
6668965ea79SLois Curfman McInnes     }
6673f08860eSBarry Smith     ierr = PetscViewerRestoreSubViewer(viewer,PETSC_COMM_SELF,&sviewer);CHKERRQ(ierr);
668b0a32e0cSBarry Smith     ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
6696bf464f9SBarry Smith     ierr = MatDestroy(&A);CHKERRQ(ierr);
6708965ea79SLois Curfman McInnes   }
6713a40ed3dSBarry Smith   PetscFunctionReturn(0);
6728965ea79SLois Curfman McInnes }
6738965ea79SLois Curfman McInnes 
674dfbe8321SBarry Smith PetscErrorCode MatView_MPIDense(Mat mat,PetscViewer viewer)
6758965ea79SLois Curfman McInnes {
676dfbe8321SBarry Smith   PetscErrorCode ierr;
677ace3abfcSBarry Smith   PetscBool      iascii,isbinary,isdraw,issocket;
6788965ea79SLois Curfman McInnes 
679433994e6SBarry Smith   PetscFunctionBegin;
680251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
681251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr);
682251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERSOCKET,&issocket);CHKERRQ(ierr);
683251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr);
6840f5bd95cSBarry Smith 
68532077d6dSBarry Smith   if (iascii || issocket || isdraw) {
686f1af5d2fSBarry Smith     ierr = MatView_MPIDense_ASCIIorDraworSocket(mat,viewer);CHKERRQ(ierr);
6870f5bd95cSBarry Smith   } else if (isbinary) {
6888491ab44SLisandro Dalcin     ierr = MatView_Dense_Binary(mat,viewer);CHKERRQ(ierr);
68911aeaf0aSBarry Smith   }
6903a40ed3dSBarry Smith   PetscFunctionReturn(0);
6918965ea79SLois Curfman McInnes }
6928965ea79SLois Curfman McInnes 
693dfbe8321SBarry Smith PetscErrorCode MatGetInfo_MPIDense(Mat A,MatInfoType flag,MatInfo *info)
6948965ea79SLois Curfman McInnes {
6953501a2bdSLois Curfman McInnes   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
6963501a2bdSLois Curfman McInnes   Mat            mdn  = mat->A;
697dfbe8321SBarry Smith   PetscErrorCode ierr;
6983966268fSBarry Smith   PetscLogDouble isend[5],irecv[5];
6998965ea79SLois Curfman McInnes 
7003a40ed3dSBarry Smith   PetscFunctionBegin;
7014e220ebcSLois Curfman McInnes   info->block_size = 1.0;
7022205254eSKarl Rupp 
7034e220ebcSLois Curfman McInnes   ierr = MatGetInfo(mdn,MAT_LOCAL,info);CHKERRQ(ierr);
7042205254eSKarl Rupp 
7054e220ebcSLois Curfman McInnes   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
7064e220ebcSLois Curfman McInnes   isend[3] = info->memory;  isend[4] = info->mallocs;
7078965ea79SLois Curfman McInnes   if (flag == MAT_LOCAL) {
7084e220ebcSLois Curfman McInnes     info->nz_used      = isend[0];
7094e220ebcSLois Curfman McInnes     info->nz_allocated = isend[1];
7104e220ebcSLois Curfman McInnes     info->nz_unneeded  = isend[2];
7114e220ebcSLois Curfman McInnes     info->memory       = isend[3];
7124e220ebcSLois Curfman McInnes     info->mallocs      = isend[4];
7138965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_MAX) {
7143966268fSBarry Smith     ierr = MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_MAX,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
7152205254eSKarl Rupp 
7164e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7174e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7184e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7194e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7204e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7218965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_SUM) {
7223966268fSBarry Smith     ierr = MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
7232205254eSKarl Rupp 
7244e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7254e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7264e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7274e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7284e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7298965ea79SLois Curfman McInnes   }
7304e220ebcSLois Curfman McInnes   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
7314e220ebcSLois Curfman McInnes   info->fill_ratio_needed = 0;
7324e220ebcSLois Curfman McInnes   info->factor_mallocs    = 0;
7333a40ed3dSBarry Smith   PetscFunctionReturn(0);
7348965ea79SLois Curfman McInnes }
7358965ea79SLois Curfman McInnes 
736ace3abfcSBarry Smith PetscErrorCode MatSetOption_MPIDense(Mat A,MatOption op,PetscBool flg)
7378965ea79SLois Curfman McInnes {
73839ddd567SLois Curfman McInnes   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
739dfbe8321SBarry Smith   PetscErrorCode ierr;
7408965ea79SLois Curfman McInnes 
7413a40ed3dSBarry Smith   PetscFunctionBegin;
74212c028f9SKris Buschelman   switch (op) {
743512a5fc5SBarry Smith   case MAT_NEW_NONZERO_LOCATIONS:
74412c028f9SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
74512c028f9SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
74643674050SBarry Smith     MatCheckPreallocated(A,1);
7474e0d8c25SBarry Smith     ierr = MatSetOption(a->A,op,flg);CHKERRQ(ierr);
74812c028f9SKris Buschelman     break;
74912c028f9SKris Buschelman   case MAT_ROW_ORIENTED:
75043674050SBarry Smith     MatCheckPreallocated(A,1);
7514e0d8c25SBarry Smith     a->roworiented = flg;
7524e0d8c25SBarry Smith     ierr = MatSetOption(a->A,op,flg);CHKERRQ(ierr);
75312c028f9SKris Buschelman     break;
7544e0d8c25SBarry Smith   case MAT_NEW_DIAGONALS:
75513fa8e87SLisandro Dalcin   case MAT_KEEP_NONZERO_PATTERN:
75612c028f9SKris Buschelman   case MAT_USE_HASH_TABLE:
757071fcb05SBarry Smith   case MAT_SORTED_FULL:
758290bbb0aSBarry Smith     ierr = PetscInfo1(A,"Option %s ignored\n",MatOptions[op]);CHKERRQ(ierr);
75912c028f9SKris Buschelman     break;
76012c028f9SKris Buschelman   case MAT_IGNORE_OFF_PROC_ENTRIES:
7614e0d8c25SBarry Smith     a->donotstash = flg;
76212c028f9SKris Buschelman     break;
76377e54ba9SKris Buschelman   case MAT_SYMMETRIC:
76477e54ba9SKris Buschelman   case MAT_STRUCTURALLY_SYMMETRIC:
7659a4540c5SBarry Smith   case MAT_HERMITIAN:
7669a4540c5SBarry Smith   case MAT_SYMMETRY_ETERNAL:
767600fe468SBarry Smith   case MAT_IGNORE_LOWER_TRIANGULAR:
7685d7aebe8SStefano Zampini   case MAT_IGNORE_ZERO_ENTRIES:
769290bbb0aSBarry Smith     ierr = PetscInfo1(A,"Option %s ignored\n",MatOptions[op]);CHKERRQ(ierr);
77077e54ba9SKris Buschelman     break;
77112c028f9SKris Buschelman   default:
772e32f2f54SBarry Smith     SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"unknown option %s",MatOptions[op]);
7733a40ed3dSBarry Smith   }
7743a40ed3dSBarry Smith   PetscFunctionReturn(0);
7758965ea79SLois Curfman McInnes }
7768965ea79SLois Curfman McInnes 
777dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_MPIDense(Mat A,Vec ll,Vec rr)
7785b2fa520SLois Curfman McInnes {
7795b2fa520SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
780637a0070SStefano Zampini   const PetscScalar *l;
781637a0070SStefano Zampini   PetscScalar       x,*v,*vv,*r;
782dfbe8321SBarry Smith   PetscErrorCode    ierr;
783637a0070SStefano Zampini   PetscInt          i,j,s2a,s3a,s2,s3,m=mdn->A->rmap->n,n=mdn->A->cmap->n,lda;
7845b2fa520SLois Curfman McInnes 
7855b2fa520SLois Curfman McInnes   PetscFunctionBegin;
786637a0070SStefano Zampini   ierr = MatDenseGetArray(mdn->A,&vv);CHKERRQ(ierr);
787637a0070SStefano Zampini   ierr = MatDenseGetLDA(mdn->A,&lda);CHKERRQ(ierr);
78872d926a5SLois Curfman McInnes   ierr = MatGetLocalSize(A,&s2,&s3);CHKERRQ(ierr);
7895b2fa520SLois Curfman McInnes   if (ll) {
79072d926a5SLois Curfman McInnes     ierr = VecGetLocalSize(ll,&s2a);CHKERRQ(ierr);
791637a0070SStefano Zampini     if (s2a != s2) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Left scaling vector non-conforming local size, %D != %D", s2a, s2);
792bca11509SBarry Smith     ierr = VecGetArrayRead(ll,&l);CHKERRQ(ierr);
7935b2fa520SLois Curfman McInnes     for (i=0; i<m; i++) {
7945b2fa520SLois Curfman McInnes       x = l[i];
795637a0070SStefano Zampini       v = vv + i;
796637a0070SStefano Zampini       for (j=0; j<n; j++) { (*v) *= x; v+= lda;}
7975b2fa520SLois Curfman McInnes     }
798bca11509SBarry Smith     ierr = VecRestoreArrayRead(ll,&l);CHKERRQ(ierr);
799637a0070SStefano Zampini     ierr = PetscLogFlops(1.0*n*m);CHKERRQ(ierr);
8005b2fa520SLois Curfman McInnes   }
8015b2fa520SLois Curfman McInnes   if (rr) {
802637a0070SStefano Zampini     const PetscScalar *ar;
803637a0070SStefano Zampini 
804175be7b4SMatthew Knepley     ierr = VecGetLocalSize(rr,&s3a);CHKERRQ(ierr);
805e32f2f54SBarry Smith     if (s3a != s3) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Right scaling vec non-conforming local size, %d != %d.", s3a, s3);
806637a0070SStefano Zampini     ierr = VecGetArrayRead(rr,&ar);CHKERRQ(ierr);
807637a0070SStefano Zampini     ierr = VecGetArray(mdn->lvec,&r);CHKERRQ(ierr);
808637a0070SStefano Zampini     ierr = PetscSFBcastBegin(mdn->Mvctx,MPIU_SCALAR,ar,r);CHKERRQ(ierr);
809637a0070SStefano Zampini     ierr = PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ar,r);CHKERRQ(ierr);
810637a0070SStefano Zampini     ierr = VecRestoreArrayRead(rr,&ar);CHKERRQ(ierr);
8115b2fa520SLois Curfman McInnes     for (i=0; i<n; i++) {
8125b2fa520SLois Curfman McInnes       x = r[i];
813637a0070SStefano Zampini       v = vv + i*lda;
8142205254eSKarl Rupp       for (j=0; j<m; j++) (*v++) *= x;
8155b2fa520SLois Curfman McInnes     }
816637a0070SStefano Zampini     ierr = VecRestoreArray(mdn->lvec,&r);CHKERRQ(ierr);
817637a0070SStefano Zampini     ierr = PetscLogFlops(1.0*n*m);CHKERRQ(ierr);
8185b2fa520SLois Curfman McInnes   }
819637a0070SStefano Zampini   ierr = MatDenseRestoreArray(mdn->A,&vv);CHKERRQ(ierr);
8205b2fa520SLois Curfman McInnes   PetscFunctionReturn(0);
8215b2fa520SLois Curfman McInnes }
8225b2fa520SLois Curfman McInnes 
823dfbe8321SBarry Smith PetscErrorCode MatNorm_MPIDense(Mat A,NormType type,PetscReal *nrm)
824096963f5SLois Curfman McInnes {
8253501a2bdSLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
826dfbe8321SBarry Smith   PetscErrorCode    ierr;
82713f74950SBarry Smith   PetscInt          i,j;
828329f5518SBarry Smith   PetscReal         sum = 0.0;
829637a0070SStefano Zampini   const PetscScalar *av,*v;
8303501a2bdSLois Curfman McInnes 
8313a40ed3dSBarry Smith   PetscFunctionBegin;
832637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(mdn->A,&av);CHKERRQ(ierr);
833637a0070SStefano Zampini   v    = av;
8343501a2bdSLois Curfman McInnes   if (mdn->size == 1) {
835064f8208SBarry Smith     ierr =  MatNorm(mdn->A,type,nrm);CHKERRQ(ierr);
8363501a2bdSLois Curfman McInnes   } else {
8373501a2bdSLois Curfman McInnes     if (type == NORM_FROBENIUS) {
838d0f46423SBarry Smith       for (i=0; i<mdn->A->cmap->n*mdn->A->rmap->n; i++) {
839329f5518SBarry Smith         sum += PetscRealPart(PetscConj(*v)*(*v)); v++;
8403501a2bdSLois Curfman McInnes       }
841b2566f29SBarry Smith       ierr = MPIU_Allreduce(&sum,nrm,1,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
8428f1a2a5eSBarry Smith       *nrm = PetscSqrtReal(*nrm);
843dc0b31edSSatish Balay       ierr = PetscLogFlops(2.0*mdn->A->cmap->n*mdn->A->rmap->n);CHKERRQ(ierr);
8443a40ed3dSBarry Smith     } else if (type == NORM_1) {
845329f5518SBarry Smith       PetscReal *tmp,*tmp2;
846580bdb30SBarry Smith       ierr = PetscCalloc2(A->cmap->N,&tmp,A->cmap->N,&tmp2);CHKERRQ(ierr);
847064f8208SBarry Smith       *nrm = 0.0;
848637a0070SStefano Zampini       v    = av;
849d0f46423SBarry Smith       for (j=0; j<mdn->A->cmap->n; j++) {
850d0f46423SBarry Smith         for (i=0; i<mdn->A->rmap->n; i++) {
85167e560aaSBarry Smith           tmp[j] += PetscAbsScalar(*v);  v++;
8523501a2bdSLois Curfman McInnes         }
8533501a2bdSLois Curfman McInnes       }
854b2566f29SBarry Smith       ierr = MPIU_Allreduce(tmp,tmp2,A->cmap->N,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
855d0f46423SBarry Smith       for (j=0; j<A->cmap->N; j++) {
856064f8208SBarry Smith         if (tmp2[j] > *nrm) *nrm = tmp2[j];
8573501a2bdSLois Curfman McInnes       }
8588627564fSBarry Smith       ierr = PetscFree2(tmp,tmp2);CHKERRQ(ierr);
859d0f46423SBarry Smith       ierr = PetscLogFlops(A->cmap->n*A->rmap->n);CHKERRQ(ierr);
8603a40ed3dSBarry Smith     } else if (type == NORM_INFINITY) { /* max row norm */
861329f5518SBarry Smith       PetscReal ntemp;
8623501a2bdSLois Curfman McInnes       ierr = MatNorm(mdn->A,type,&ntemp);CHKERRQ(ierr);
863b2566f29SBarry Smith       ierr = MPIU_Allreduce(&ntemp,nrm,1,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
864ce94432eSBarry Smith     } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for two norm");
8653501a2bdSLois Curfman McInnes   }
866637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(mdn->A,&av);CHKERRQ(ierr);
8673a40ed3dSBarry Smith   PetscFunctionReturn(0);
8683501a2bdSLois Curfman McInnes }
8693501a2bdSLois Curfman McInnes 
870fc4dec0aSBarry Smith PetscErrorCode MatTranspose_MPIDense(Mat A,MatReuse reuse,Mat *matout)
8713501a2bdSLois Curfman McInnes {
8723501a2bdSLois Curfman McInnes   Mat_MPIDense   *a    = (Mat_MPIDense*)A->data;
8733501a2bdSLois Curfman McInnes   Mat            B;
874d0f46423SBarry Smith   PetscInt       M = A->rmap->N,N = A->cmap->N,m,n,*rwork,rstart = A->rmap->rstart;
8756849ba73SBarry Smith   PetscErrorCode ierr;
876637a0070SStefano Zampini   PetscInt       j,i,lda;
87787828ca2SBarry Smith   PetscScalar    *v;
8783501a2bdSLois Curfman McInnes 
8793a40ed3dSBarry Smith   PetscFunctionBegin;
880cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) {
881ce94432eSBarry Smith     ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
882d0f46423SBarry Smith     ierr = MatSetSizes(B,A->cmap->n,A->rmap->n,N,M);CHKERRQ(ierr);
8837adad957SLisandro Dalcin     ierr = MatSetType(B,((PetscObject)A)->type_name);CHKERRQ(ierr);
8840298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(B,NULL);CHKERRQ(ierr);
885637a0070SStefano Zampini   } else B = *matout;
8863501a2bdSLois Curfman McInnes 
887637a0070SStefano Zampini   m    = a->A->rmap->n; n = a->A->cmap->n;
888637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(a->A,(const PetscScalar**)&v);CHKERRQ(ierr);
889637a0070SStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
890785e854fSJed Brown   ierr = PetscMalloc1(m,&rwork);CHKERRQ(ierr);
8913501a2bdSLois Curfman McInnes   for (i=0; i<m; i++) rwork[i] = rstart + i;
8921acff37aSSatish Balay   for (j=0; j<n; j++) {
8933501a2bdSLois Curfman McInnes     ierr = MatSetValues(B,1,&j,m,rwork,v,INSERT_VALUES);CHKERRQ(ierr);
894637a0070SStefano Zampini     v   += lda;
8953501a2bdSLois Curfman McInnes   }
896637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,(const PetscScalar**)&v);CHKERRQ(ierr);
897606d414cSSatish Balay   ierr = PetscFree(rwork);CHKERRQ(ierr);
8986d4a8577SBarry Smith   ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
8996d4a8577SBarry Smith   ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
900cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) {
9013501a2bdSLois Curfman McInnes     *matout = B;
9023501a2bdSLois Curfman McInnes   } else {
90328be2f97SBarry Smith     ierr = MatHeaderMerge(A,&B);CHKERRQ(ierr);
9043501a2bdSLois Curfman McInnes   }
9053a40ed3dSBarry Smith   PetscFunctionReturn(0);
906096963f5SLois Curfman McInnes }
907096963f5SLois Curfman McInnes 
9086849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat,MatDuplicateOption,Mat*);
90952c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat,PetscScalar);
9108965ea79SLois Curfman McInnes 
9114994cf47SJed Brown PetscErrorCode MatSetUp_MPIDense(Mat A)
912273d9f13SBarry Smith {
913dfbe8321SBarry Smith   PetscErrorCode ierr;
914273d9f13SBarry Smith 
915273d9f13SBarry Smith   PetscFunctionBegin;
91618992e5dSStefano Zampini   ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr);
91718992e5dSStefano Zampini   ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr);
91818992e5dSStefano Zampini   if (!A->preallocated) {
919273d9f13SBarry Smith     ierr = MatMPIDenseSetPreallocation(A,0);CHKERRQ(ierr);
92018992e5dSStefano Zampini   }
921273d9f13SBarry Smith   PetscFunctionReturn(0);
922273d9f13SBarry Smith }
923273d9f13SBarry Smith 
924488007eeSBarry Smith PetscErrorCode MatAXPY_MPIDense(Mat Y,PetscScalar alpha,Mat X,MatStructure str)
925488007eeSBarry Smith {
926488007eeSBarry Smith   PetscErrorCode ierr;
927488007eeSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)Y->data, *B = (Mat_MPIDense*)X->data;
928488007eeSBarry Smith 
929488007eeSBarry Smith   PetscFunctionBegin;
930488007eeSBarry Smith   ierr = MatAXPY(A->A,alpha,B->A,str);CHKERRQ(ierr);
931488007eeSBarry Smith   PetscFunctionReturn(0);
932488007eeSBarry Smith }
933488007eeSBarry Smith 
9347087cfbeSBarry Smith PetscErrorCode MatConjugate_MPIDense(Mat mat)
935ba337c44SJed Brown {
936ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
937ba337c44SJed Brown   PetscErrorCode ierr;
938ba337c44SJed Brown 
939ba337c44SJed Brown   PetscFunctionBegin;
940ba337c44SJed Brown   ierr = MatConjugate(a->A);CHKERRQ(ierr);
941ba337c44SJed Brown   PetscFunctionReturn(0);
942ba337c44SJed Brown }
943ba337c44SJed Brown 
944ba337c44SJed Brown PetscErrorCode MatRealPart_MPIDense(Mat A)
945ba337c44SJed Brown {
946ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
947ba337c44SJed Brown   PetscErrorCode ierr;
948ba337c44SJed Brown 
949ba337c44SJed Brown   PetscFunctionBegin;
950ba337c44SJed Brown   ierr = MatRealPart(a->A);CHKERRQ(ierr);
951ba337c44SJed Brown   PetscFunctionReturn(0);
952ba337c44SJed Brown }
953ba337c44SJed Brown 
954ba337c44SJed Brown PetscErrorCode MatImaginaryPart_MPIDense(Mat A)
955ba337c44SJed Brown {
956ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
957ba337c44SJed Brown   PetscErrorCode ierr;
958ba337c44SJed Brown 
959ba337c44SJed Brown   PetscFunctionBegin;
960ba337c44SJed Brown   ierr = MatImaginaryPart(a->A);CHKERRQ(ierr);
961ba337c44SJed Brown   PetscFunctionReturn(0);
962ba337c44SJed Brown }
963ba337c44SJed Brown 
96449a6ff4bSBarry Smith static PetscErrorCode MatGetColumnVector_MPIDense(Mat A,Vec v,PetscInt col)
96549a6ff4bSBarry Smith {
96649a6ff4bSBarry Smith   PetscErrorCode ierr;
967637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
96849a6ff4bSBarry Smith 
96949a6ff4bSBarry Smith   PetscFunctionBegin;
970637a0070SStefano Zampini   if (!a->A) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing local matrix");
971637a0070SStefano Zampini   if (!a->A->ops->getcolumnvector) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing get column operation");
972637a0070SStefano Zampini   ierr = (*a->A->ops->getcolumnvector)(a->A,v,col);CHKERRQ(ierr);
97349a6ff4bSBarry Smith   PetscFunctionReturn(0);
97449a6ff4bSBarry Smith }
97549a6ff4bSBarry Smith 
97652c5f739Sprj- PETSC_INTERN PetscErrorCode MatGetColumnNorms_SeqDense(Mat,NormType,PetscReal*);
97752c5f739Sprj- 
9780716a85fSBarry Smith PetscErrorCode MatGetColumnNorms_MPIDense(Mat A,NormType type,PetscReal *norms)
9790716a85fSBarry Smith {
9800716a85fSBarry Smith   PetscErrorCode ierr;
9810716a85fSBarry Smith   PetscInt       i,n;
9820716a85fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
9830716a85fSBarry Smith   PetscReal      *work;
9840716a85fSBarry Smith 
9850716a85fSBarry Smith   PetscFunctionBegin;
9860298fd71SBarry Smith   ierr = MatGetSize(A,NULL,&n);CHKERRQ(ierr);
987785e854fSJed Brown   ierr = PetscMalloc1(n,&work);CHKERRQ(ierr);
9880716a85fSBarry Smith   ierr = MatGetColumnNorms_SeqDense(a->A,type,work);CHKERRQ(ierr);
9890716a85fSBarry Smith   if (type == NORM_2) {
9900716a85fSBarry Smith     for (i=0; i<n; i++) work[i] *= work[i];
9910716a85fSBarry Smith   }
9920716a85fSBarry Smith   if (type == NORM_INFINITY) {
993b2566f29SBarry Smith     ierr = MPIU_Allreduce(work,norms,n,MPIU_REAL,MPIU_MAX,A->hdr.comm);CHKERRQ(ierr);
9940716a85fSBarry Smith   } else {
995b2566f29SBarry Smith     ierr = MPIU_Allreduce(work,norms,n,MPIU_REAL,MPIU_SUM,A->hdr.comm);CHKERRQ(ierr);
9960716a85fSBarry Smith   }
9970716a85fSBarry Smith   ierr = PetscFree(work);CHKERRQ(ierr);
9980716a85fSBarry Smith   if (type == NORM_2) {
9998f1a2a5eSBarry Smith     for (i=0; i<n; i++) norms[i] = PetscSqrtReal(norms[i]);
10000716a85fSBarry Smith   }
10010716a85fSBarry Smith   PetscFunctionReturn(0);
10020716a85fSBarry Smith }
10030716a85fSBarry Smith 
1004637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
10056947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10066947451fSStefano Zampini {
10076947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10086947451fSStefano Zampini   PetscErrorCode ierr;
10096947451fSStefano Zampini   PetscInt       lda;
10106947451fSStefano Zampini 
10116947451fSStefano Zampini   PetscFunctionBegin;
10126947451fSStefano Zampini   if (a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec first");
10136947451fSStefano Zampini   if (!a->cvec) {
10146947451fSStefano Zampini     ierr = VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
10156947451fSStefano Zampini   }
10166947451fSStefano Zampini   a->vecinuse = col + 1;
10176947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
10186947451fSStefano Zampini   ierr = MatDenseCUDAGetArray(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
10196947451fSStefano Zampini   ierr = VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
10206947451fSStefano Zampini   *v   = a->cvec;
10216947451fSStefano Zampini   PetscFunctionReturn(0);
10226947451fSStefano Zampini }
10236947451fSStefano Zampini 
10246947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10256947451fSStefano Zampini {
10266947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10276947451fSStefano Zampini   PetscErrorCode ierr;
10286947451fSStefano Zampini 
10296947451fSStefano Zampini   PetscFunctionBegin;
10306947451fSStefano Zampini   if (!a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec first");
10316947451fSStefano Zampini   if (!a->cvec) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
10326947451fSStefano Zampini   a->vecinuse = 0;
10336947451fSStefano Zampini   ierr = MatDenseCUDARestoreArray(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
10346947451fSStefano Zampini   ierr = VecCUDAResetArray(a->cvec);CHKERRQ(ierr);
10356947451fSStefano Zampini   *v   = NULL;
10366947451fSStefano Zampini   PetscFunctionReturn(0);
10376947451fSStefano Zampini }
10386947451fSStefano Zampini 
10396947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10406947451fSStefano Zampini {
10416947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10426947451fSStefano Zampini   PetscInt       lda;
10436947451fSStefano Zampini   PetscErrorCode ierr;
10446947451fSStefano Zampini 
10456947451fSStefano Zampini   PetscFunctionBegin;
10466947451fSStefano Zampini   if (a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec first");
10476947451fSStefano Zampini   if (!a->cvec) {
10486947451fSStefano Zampini     ierr = VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
10496947451fSStefano Zampini   }
10506947451fSStefano Zampini   a->vecinuse = col + 1;
10516947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
10526947451fSStefano Zampini   ierr = MatDenseCUDAGetArrayRead(a->A,&a->ptrinuse);CHKERRQ(ierr);
10536947451fSStefano Zampini   ierr = VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
10546947451fSStefano Zampini   ierr = VecLockReadPush(a->cvec);CHKERRQ(ierr);
10556947451fSStefano Zampini   *v   = a->cvec;
10566947451fSStefano Zampini   PetscFunctionReturn(0);
10576947451fSStefano Zampini }
10586947451fSStefano Zampini 
10596947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10606947451fSStefano Zampini {
10616947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10626947451fSStefano Zampini   PetscErrorCode ierr;
10636947451fSStefano Zampini 
10646947451fSStefano Zampini   PetscFunctionBegin;
10656947451fSStefano Zampini   if (!a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec first");
10666947451fSStefano Zampini   if (!a->cvec) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
10676947451fSStefano Zampini   a->vecinuse = 0;
10686947451fSStefano Zampini   ierr = MatDenseCUDARestoreArrayRead(a->A,&a->ptrinuse);CHKERRQ(ierr);
10696947451fSStefano Zampini   ierr = VecLockReadPop(a->cvec);CHKERRQ(ierr);
10706947451fSStefano Zampini   ierr = VecCUDAResetArray(a->cvec);CHKERRQ(ierr);
10716947451fSStefano Zampini   *v   = NULL;
10726947451fSStefano Zampini   PetscFunctionReturn(0);
10736947451fSStefano Zampini }
10746947451fSStefano Zampini 
10756947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10766947451fSStefano Zampini {
10776947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10786947451fSStefano Zampini   PetscErrorCode ierr;
10796947451fSStefano Zampini   PetscInt       lda;
10806947451fSStefano Zampini 
10816947451fSStefano Zampini   PetscFunctionBegin;
10826947451fSStefano Zampini   if (a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec first");
10836947451fSStefano Zampini   if (!a->cvec) {
10846947451fSStefano Zampini     ierr = VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
10856947451fSStefano Zampini   }
10866947451fSStefano Zampini   a->vecinuse = col + 1;
10876947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
10886947451fSStefano Zampini   ierr = MatDenseCUDAGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
10896947451fSStefano Zampini   ierr = VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
10906947451fSStefano Zampini   *v   = a->cvec;
10916947451fSStefano Zampini   PetscFunctionReturn(0);
10926947451fSStefano Zampini }
10936947451fSStefano Zampini 
10946947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10956947451fSStefano Zampini {
10966947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10976947451fSStefano Zampini   PetscErrorCode ierr;
10986947451fSStefano Zampini 
10996947451fSStefano Zampini   PetscFunctionBegin;
11006947451fSStefano Zampini   if (!a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec first");
11016947451fSStefano Zampini   if (!a->cvec) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
11026947451fSStefano Zampini   a->vecinuse = 0;
11036947451fSStefano Zampini   ierr = MatDenseCUDARestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
11046947451fSStefano Zampini   ierr = VecCUDAResetArray(a->cvec);CHKERRQ(ierr);
11056947451fSStefano Zampini   *v   = NULL;
11066947451fSStefano Zampini   PetscFunctionReturn(0);
11076947451fSStefano Zampini }
11086947451fSStefano Zampini 
1109637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAPlaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1110637a0070SStefano Zampini {
1111637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1112637a0070SStefano Zampini   PetscErrorCode ierr;
1113637a0070SStefano Zampini 
1114637a0070SStefano Zampini   PetscFunctionBegin;
11156947451fSStefano Zampini   if (l->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec first");
1116637a0070SStefano Zampini   ierr = MatDenseCUDAPlaceArray(l->A,a);CHKERRQ(ierr);
1117637a0070SStefano Zampini   PetscFunctionReturn(0);
1118637a0070SStefano Zampini }
1119637a0070SStefano Zampini 
1120637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAResetArray_MPIDenseCUDA(Mat A)
1121637a0070SStefano Zampini {
1122637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1123637a0070SStefano Zampini   PetscErrorCode ierr;
1124637a0070SStefano Zampini 
1125637a0070SStefano Zampini   PetscFunctionBegin;
11266947451fSStefano Zampini   if (l->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec first");
1127637a0070SStefano Zampini   ierr = MatDenseCUDAResetArray(l->A);CHKERRQ(ierr);
1128637a0070SStefano Zampini   PetscFunctionReturn(0);
1129637a0070SStefano Zampini }
1130637a0070SStefano Zampini 
1131d5ea218eSStefano Zampini static PetscErrorCode MatDenseCUDAReplaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1132d5ea218eSStefano Zampini {
1133d5ea218eSStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1134d5ea218eSStefano Zampini   PetscErrorCode ierr;
1135d5ea218eSStefano Zampini 
1136d5ea218eSStefano Zampini   PetscFunctionBegin;
1137d5ea218eSStefano Zampini   if (l->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec first");
1138d5ea218eSStefano Zampini   ierr = MatDenseCUDAReplaceArray(l->A,a);CHKERRQ(ierr);
1139d5ea218eSStefano Zampini   PetscFunctionReturn(0);
1140d5ea218eSStefano Zampini }
1141d5ea218eSStefano Zampini 
1142637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1143637a0070SStefano Zampini {
1144637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1145637a0070SStefano Zampini   PetscErrorCode ierr;
1146637a0070SStefano Zampini 
1147637a0070SStefano Zampini   PetscFunctionBegin;
1148637a0070SStefano Zampini   ierr = MatDenseCUDAGetArrayWrite(l->A,a);CHKERRQ(ierr);
1149637a0070SStefano Zampini   PetscFunctionReturn(0);
1150637a0070SStefano Zampini }
1151637a0070SStefano Zampini 
1152637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1153637a0070SStefano Zampini {
1154637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1155637a0070SStefano Zampini   PetscErrorCode ierr;
1156637a0070SStefano Zampini 
1157637a0070SStefano Zampini   PetscFunctionBegin;
1158637a0070SStefano Zampini   ierr = MatDenseCUDARestoreArrayWrite(l->A,a);CHKERRQ(ierr);
1159637a0070SStefano Zampini   PetscFunctionReturn(0);
1160637a0070SStefano Zampini }
1161637a0070SStefano Zampini 
1162637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1163637a0070SStefano Zampini {
1164637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1165637a0070SStefano Zampini   PetscErrorCode ierr;
1166637a0070SStefano Zampini 
1167637a0070SStefano Zampini   PetscFunctionBegin;
1168637a0070SStefano Zampini   ierr = MatDenseCUDAGetArrayRead(l->A,a);CHKERRQ(ierr);
1169637a0070SStefano Zampini   PetscFunctionReturn(0);
1170637a0070SStefano Zampini }
1171637a0070SStefano Zampini 
1172637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1173637a0070SStefano Zampini {
1174637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1175637a0070SStefano Zampini   PetscErrorCode ierr;
1176637a0070SStefano Zampini 
1177637a0070SStefano Zampini   PetscFunctionBegin;
1178637a0070SStefano Zampini   ierr = MatDenseCUDARestoreArrayRead(l->A,a);CHKERRQ(ierr);
1179637a0070SStefano Zampini   PetscFunctionReturn(0);
1180637a0070SStefano Zampini }
1181637a0070SStefano Zampini 
1182637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1183637a0070SStefano Zampini {
1184637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1185637a0070SStefano Zampini   PetscErrorCode ierr;
1186637a0070SStefano Zampini 
1187637a0070SStefano Zampini   PetscFunctionBegin;
1188637a0070SStefano Zampini   ierr = MatDenseCUDAGetArray(l->A,a);CHKERRQ(ierr);
1189637a0070SStefano Zampini   PetscFunctionReturn(0);
1190637a0070SStefano Zampini }
1191637a0070SStefano Zampini 
1192637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1193637a0070SStefano Zampini {
1194637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1195637a0070SStefano Zampini   PetscErrorCode ierr;
1196637a0070SStefano Zampini 
1197637a0070SStefano Zampini   PetscFunctionBegin;
1198637a0070SStefano Zampini   ierr = MatDenseCUDARestoreArray(l->A,a);CHKERRQ(ierr);
1199637a0070SStefano Zampini   PetscFunctionReturn(0);
1200637a0070SStefano Zampini }
1201637a0070SStefano Zampini 
12026947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12036947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12046947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat,PetscInt,Vec*);
12056947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12066947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12076947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat,PetscInt,Vec*);
12086947451fSStefano Zampini 
1209637a0070SStefano Zampini static PetscErrorCode MatBindToCPU_MPIDenseCUDA(Mat mat,PetscBool bind)
1210637a0070SStefano Zampini {
1211637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)mat->data;
1212637a0070SStefano Zampini   PetscErrorCode ierr;
1213637a0070SStefano Zampini 
1214637a0070SStefano Zampini   PetscFunctionBegin;
12156947451fSStefano Zampini   if (d->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec first");
1216637a0070SStefano Zampini   if (d->A) {
1217637a0070SStefano Zampini     ierr = MatBindToCPU(d->A,bind);CHKERRQ(ierr);
1218637a0070SStefano Zampini   }
1219637a0070SStefano Zampini   mat->boundtocpu = bind;
12206947451fSStefano Zampini   if (!bind) {
12216947451fSStefano Zampini     PetscBool iscuda;
12226947451fSStefano Zampini 
12236947451fSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)d->cvec,VECMPICUDA,&iscuda);CHKERRQ(ierr);
12246947451fSStefano Zampini     if (!iscuda) {
12256947451fSStefano Zampini       ierr = VecDestroy(&d->cvec);CHKERRQ(ierr);
12266947451fSStefano Zampini     }
12276947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDenseCUDA);CHKERRQ(ierr);
12286947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDenseCUDA);CHKERRQ(ierr);
12296947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDenseCUDA);CHKERRQ(ierr);
12306947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDenseCUDA);CHKERRQ(ierr);
12316947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDenseCUDA);CHKERRQ(ierr);
12326947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDenseCUDA);CHKERRQ(ierr);
12336947451fSStefano Zampini   } else {
12346947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense);CHKERRQ(ierr);
12356947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense);CHKERRQ(ierr);
12366947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense);CHKERRQ(ierr);
12376947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense);CHKERRQ(ierr);
12386947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense);CHKERRQ(ierr);
12396947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense);CHKERRQ(ierr);
12406947451fSStefano Zampini   }
1241637a0070SStefano Zampini   PetscFunctionReturn(0);
1242637a0070SStefano Zampini }
1243637a0070SStefano Zampini 
1244637a0070SStefano Zampini PetscErrorCode MatMPIDenseCUDASetPreallocation(Mat A, PetscScalar *d_data)
1245637a0070SStefano Zampini {
1246637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)A->data;
1247637a0070SStefano Zampini   PetscErrorCode ierr;
1248637a0070SStefano Zampini   PetscBool      iscuda;
1249637a0070SStefano Zampini 
1250637a0070SStefano Zampini   PetscFunctionBegin;
1251d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
1252637a0070SStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda);CHKERRQ(ierr);
1253637a0070SStefano Zampini   if (!iscuda) PetscFunctionReturn(0);
1254637a0070SStefano Zampini   ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr);
1255637a0070SStefano Zampini   ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr);
1256637a0070SStefano Zampini   if (!d->A) {
1257637a0070SStefano Zampini     ierr = MatCreate(PETSC_COMM_SELF,&d->A);CHKERRQ(ierr);
1258637a0070SStefano Zampini     ierr = PetscLogObjectParent((PetscObject)A,(PetscObject)d->A);CHKERRQ(ierr);
1259637a0070SStefano Zampini     ierr = MatSetSizes(d->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N);CHKERRQ(ierr);
1260637a0070SStefano Zampini   }
1261637a0070SStefano Zampini   ierr = MatSetType(d->A,MATSEQDENSECUDA);CHKERRQ(ierr);
1262637a0070SStefano Zampini   ierr = MatSeqDenseCUDASetPreallocation(d->A,d_data);CHKERRQ(ierr);
1263637a0070SStefano Zampini   A->preallocated = PETSC_TRUE;
1264637a0070SStefano Zampini   PetscFunctionReturn(0);
1265637a0070SStefano Zampini }
1266637a0070SStefano Zampini #endif
1267637a0070SStefano Zampini 
126873a71a0fSBarry Smith static PetscErrorCode MatSetRandom_MPIDense(Mat x,PetscRandom rctx)
126973a71a0fSBarry Smith {
127073a71a0fSBarry Smith   Mat_MPIDense   *d = (Mat_MPIDense*)x->data;
127173a71a0fSBarry Smith   PetscErrorCode ierr;
127273a71a0fSBarry Smith 
127373a71a0fSBarry Smith   PetscFunctionBegin;
1274637a0070SStefano Zampini   ierr = MatSetRandom(d->A,rctx);CHKERRQ(ierr);
127573a71a0fSBarry Smith   PetscFunctionReturn(0);
127673a71a0fSBarry Smith }
127773a71a0fSBarry Smith 
12783b49f96aSBarry Smith static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A,PetscBool  *missing,PetscInt *d)
12793b49f96aSBarry Smith {
12803b49f96aSBarry Smith   PetscFunctionBegin;
12813b49f96aSBarry Smith   *missing = PETSC_FALSE;
12823b49f96aSBarry Smith   PetscFunctionReturn(0);
12833b49f96aSBarry Smith }
12843b49f96aSBarry Smith 
12854222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1286cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
1287*6718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
1288*6718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1289*6718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat,Mat,PetscBool*);
1290*6718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat,PetscViewer);
1291cc48ffa7SToby Isaac 
12928965ea79SLois Curfman McInnes /* -------------------------------------------------------------------*/
129309dc0095SBarry Smith static struct _MatOps MatOps_Values = { MatSetValues_MPIDense,
129409dc0095SBarry Smith                                         MatGetRow_MPIDense,
129509dc0095SBarry Smith                                         MatRestoreRow_MPIDense,
129609dc0095SBarry Smith                                         MatMult_MPIDense,
129797304618SKris Buschelman                                 /*  4*/ MatMultAdd_MPIDense,
12987c922b88SBarry Smith                                         MatMultTranspose_MPIDense,
12997c922b88SBarry Smith                                         MatMultTransposeAdd_MPIDense,
13008965ea79SLois Curfman McInnes                                         0,
130109dc0095SBarry Smith                                         0,
130209dc0095SBarry Smith                                         0,
130397304618SKris Buschelman                                 /* 10*/ 0,
130409dc0095SBarry Smith                                         0,
130509dc0095SBarry Smith                                         0,
130609dc0095SBarry Smith                                         0,
130709dc0095SBarry Smith                                         MatTranspose_MPIDense,
130897304618SKris Buschelman                                 /* 15*/ MatGetInfo_MPIDense,
13096e4ee0c6SHong Zhang                                         MatEqual_MPIDense,
131009dc0095SBarry Smith                                         MatGetDiagonal_MPIDense,
13115b2fa520SLois Curfman McInnes                                         MatDiagonalScale_MPIDense,
131209dc0095SBarry Smith                                         MatNorm_MPIDense,
131397304618SKris Buschelman                                 /* 20*/ MatAssemblyBegin_MPIDense,
131409dc0095SBarry Smith                                         MatAssemblyEnd_MPIDense,
131509dc0095SBarry Smith                                         MatSetOption_MPIDense,
131609dc0095SBarry Smith                                         MatZeroEntries_MPIDense,
1317d519adbfSMatthew Knepley                                 /* 24*/ MatZeroRows_MPIDense,
1318919b68f7SBarry Smith                                         0,
131901b82886SBarry Smith                                         0,
132001b82886SBarry Smith                                         0,
132101b82886SBarry Smith                                         0,
13224994cf47SJed Brown                                 /* 29*/ MatSetUp_MPIDense,
1323273d9f13SBarry Smith                                         0,
132409dc0095SBarry Smith                                         0,
1325c56a70eeSBarry Smith                                         MatGetDiagonalBlock_MPIDense,
13268c778c55SBarry Smith                                         0,
1327d519adbfSMatthew Knepley                                 /* 34*/ MatDuplicate_MPIDense,
132809dc0095SBarry Smith                                         0,
132909dc0095SBarry Smith                                         0,
133009dc0095SBarry Smith                                         0,
133109dc0095SBarry Smith                                         0,
1332d519adbfSMatthew Knepley                                 /* 39*/ MatAXPY_MPIDense,
13337dae84e0SHong Zhang                                         MatCreateSubMatrices_MPIDense,
133409dc0095SBarry Smith                                         0,
133509dc0095SBarry Smith                                         MatGetValues_MPIDense,
133609dc0095SBarry Smith                                         0,
1337d519adbfSMatthew Knepley                                 /* 44*/ 0,
133809dc0095SBarry Smith                                         MatScale_MPIDense,
13397d68702bSBarry Smith                                         MatShift_Basic,
134009dc0095SBarry Smith                                         0,
134109dc0095SBarry Smith                                         0,
134273a71a0fSBarry Smith                                 /* 49*/ MatSetRandom_MPIDense,
134309dc0095SBarry Smith                                         0,
134409dc0095SBarry Smith                                         0,
134509dc0095SBarry Smith                                         0,
134609dc0095SBarry Smith                                         0,
1347d519adbfSMatthew Knepley                                 /* 54*/ 0,
134809dc0095SBarry Smith                                         0,
134909dc0095SBarry Smith                                         0,
135009dc0095SBarry Smith                                         0,
135109dc0095SBarry Smith                                         0,
13527dae84e0SHong Zhang                                 /* 59*/ MatCreateSubMatrix_MPIDense,
1353b9b97703SBarry Smith                                         MatDestroy_MPIDense,
1354b9b97703SBarry Smith                                         MatView_MPIDense,
1355357abbc8SBarry Smith                                         0,
135697304618SKris Buschelman                                         0,
1357d519adbfSMatthew Knepley                                 /* 64*/ 0,
135897304618SKris Buschelman                                         0,
135997304618SKris Buschelman                                         0,
136097304618SKris Buschelman                                         0,
136197304618SKris Buschelman                                         0,
1362d519adbfSMatthew Knepley                                 /* 69*/ 0,
136397304618SKris Buschelman                                         0,
136497304618SKris Buschelman                                         0,
136597304618SKris Buschelman                                         0,
136697304618SKris Buschelman                                         0,
1367d519adbfSMatthew Knepley                                 /* 74*/ 0,
136897304618SKris Buschelman                                         0,
136997304618SKris Buschelman                                         0,
137097304618SKris Buschelman                                         0,
137197304618SKris Buschelman                                         0,
1372d519adbfSMatthew Knepley                                 /* 79*/ 0,
137397304618SKris Buschelman                                         0,
137497304618SKris Buschelman                                         0,
137597304618SKris Buschelman                                         0,
13765bba2384SShri Abhyankar                                 /* 83*/ MatLoad_MPIDense,
1377865e5f61SKris Buschelman                                         0,
1378865e5f61SKris Buschelman                                         0,
1379865e5f61SKris Buschelman                                         0,
1380865e5f61SKris Buschelman                                         0,
1381865e5f61SKris Buschelman                                         0,
13824222ddf1SHong Zhang                                 /* 89*/ 0,
13834222ddf1SHong Zhang                                         0,
1384*6718818eSStefano Zampini                                         0,
13852fbe02b9SBarry Smith                                         0,
1386ba337c44SJed Brown                                         0,
1387d519adbfSMatthew Knepley                                 /* 94*/ 0,
13884222ddf1SHong Zhang                                         0,
1389*6718818eSStefano Zampini                                         MatMatTransposeMultSymbolic_MPIDense_MPIDense,
1390cc48ffa7SToby Isaac                                         MatMatTransposeMultNumeric_MPIDense_MPIDense,
1391ba337c44SJed Brown                                         0,
13924222ddf1SHong Zhang                                 /* 99*/ MatProductSetFromOptions_MPIDense,
1393ba337c44SJed Brown                                         0,
1394ba337c44SJed Brown                                         0,
1395ba337c44SJed Brown                                         MatConjugate_MPIDense,
1396ba337c44SJed Brown                                         0,
1397ba337c44SJed Brown                                 /*104*/ 0,
1398ba337c44SJed Brown                                         MatRealPart_MPIDense,
1399ba337c44SJed Brown                                         MatImaginaryPart_MPIDense,
140086d161a7SShri Abhyankar                                         0,
140186d161a7SShri Abhyankar                                         0,
140286d161a7SShri Abhyankar                                 /*109*/ 0,
140386d161a7SShri Abhyankar                                         0,
140486d161a7SShri Abhyankar                                         0,
140549a6ff4bSBarry Smith                                         MatGetColumnVector_MPIDense,
14063b49f96aSBarry Smith                                         MatMissingDiagonal_MPIDense,
140786d161a7SShri Abhyankar                                 /*114*/ 0,
140886d161a7SShri Abhyankar                                         0,
140986d161a7SShri Abhyankar                                         0,
141086d161a7SShri Abhyankar                                         0,
141186d161a7SShri Abhyankar                                         0,
141286d161a7SShri Abhyankar                                 /*119*/ 0,
141386d161a7SShri Abhyankar                                         0,
141486d161a7SShri Abhyankar                                         0,
14150716a85fSBarry Smith                                         0,
14160716a85fSBarry Smith                                         0,
14170716a85fSBarry Smith                                 /*124*/ 0,
14183964eb88SJed Brown                                         MatGetColumnNorms_MPIDense,
14193964eb88SJed Brown                                         0,
14203964eb88SJed Brown                                         0,
14213964eb88SJed Brown                                         0,
14223964eb88SJed Brown                                 /*129*/ 0,
14234222ddf1SHong Zhang                                         0,
1424*6718818eSStefano Zampini                                         MatTransposeMatMultSymbolic_MPIDense_MPIDense,
1425cb20be35SHong Zhang                                         MatTransposeMatMultNumeric_MPIDense_MPIDense,
14263964eb88SJed Brown                                         0,
14273964eb88SJed Brown                                 /*134*/ 0,
14283964eb88SJed Brown                                         0,
14293964eb88SJed Brown                                         0,
14303964eb88SJed Brown                                         0,
14313964eb88SJed Brown                                         0,
14323964eb88SJed Brown                                 /*139*/ 0,
1433f9426fe0SMark Adams                                         0,
143494e2cb23SJakub Kruzik                                         0,
143594e2cb23SJakub Kruzik                                         0,
143694e2cb23SJakub Kruzik                                         0,
14374222ddf1SHong Zhang                                         MatCreateMPIMatConcatenateSeqMat_MPIDense,
14384222ddf1SHong Zhang                                 /*145*/ 0,
14394222ddf1SHong Zhang                                         0,
14404222ddf1SHong Zhang                                         0
1441ba337c44SJed Brown };
14428965ea79SLois Curfman McInnes 
14437087cfbeSBarry Smith PetscErrorCode  MatMPIDenseSetPreallocation_MPIDense(Mat mat,PetscScalar *data)
1444a23d5eceSKris Buschelman {
1445637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
1446637a0070SStefano Zampini   PetscBool      iscuda;
1447dfbe8321SBarry Smith   PetscErrorCode ierr;
1448a23d5eceSKris Buschelman 
1449a23d5eceSKris Buschelman   PetscFunctionBegin;
145034ef9618SShri Abhyankar   ierr = PetscLayoutSetUp(mat->rmap);CHKERRQ(ierr);
145134ef9618SShri Abhyankar   ierr = PetscLayoutSetUp(mat->cmap);CHKERRQ(ierr);
1452637a0070SStefano Zampini   if (!a->A) {
1453f69a0ea3SMatthew Knepley     ierr = MatCreate(PETSC_COMM_SELF,&a->A);CHKERRQ(ierr);
14543bb1ff40SBarry Smith     ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A);CHKERRQ(ierr);
1455637a0070SStefano Zampini     ierr = MatSetSizes(a->A,mat->rmap->n,mat->cmap->N,mat->rmap->n,mat->cmap->N);CHKERRQ(ierr);
1456637a0070SStefano Zampini   }
1457637a0070SStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)mat,MATMPIDENSECUDA,&iscuda);CHKERRQ(ierr);
1458637a0070SStefano Zampini   ierr = MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE);CHKERRQ(ierr);
1459637a0070SStefano Zampini   ierr = MatSeqDenseSetPreallocation(a->A,data);CHKERRQ(ierr);
1460637a0070SStefano Zampini   mat->preallocated = PETSC_TRUE;
1461a23d5eceSKris Buschelman   PetscFunctionReturn(0);
1462a23d5eceSKris Buschelman }
1463a23d5eceSKris Buschelman 
146465b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
1465cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
14668baccfbdSHong Zhang {
14678ea901baSHong Zhang   Mat            mat_elemental;
14688ea901baSHong Zhang   PetscErrorCode ierr;
146932d7a744SHong Zhang   PetscScalar    *v;
147032d7a744SHong Zhang   PetscInt       m=A->rmap->n,N=A->cmap->N,rstart=A->rmap->rstart,i,*rows,*cols;
14718ea901baSHong Zhang 
14728baccfbdSHong Zhang   PetscFunctionBegin;
1473378336b6SHong Zhang   if (reuse == MAT_REUSE_MATRIX) {
1474378336b6SHong Zhang     mat_elemental = *newmat;
1475378336b6SHong Zhang     ierr = MatZeroEntries(*newmat);CHKERRQ(ierr);
1476378336b6SHong Zhang   } else {
1477378336b6SHong Zhang     ierr = MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental);CHKERRQ(ierr);
1478378336b6SHong Zhang     ierr = MatSetSizes(mat_elemental,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
1479378336b6SHong Zhang     ierr = MatSetType(mat_elemental,MATELEMENTAL);CHKERRQ(ierr);
1480378336b6SHong Zhang     ierr = MatSetUp(mat_elemental);CHKERRQ(ierr);
148132d7a744SHong Zhang     ierr = MatSetOption(mat_elemental,MAT_ROW_ORIENTED,PETSC_FALSE);CHKERRQ(ierr);
1482378336b6SHong Zhang   }
1483378336b6SHong Zhang 
148432d7a744SHong Zhang   ierr = PetscMalloc2(m,&rows,N,&cols);CHKERRQ(ierr);
148532d7a744SHong Zhang   for (i=0; i<N; i++) cols[i] = i;
148632d7a744SHong Zhang   for (i=0; i<m; i++) rows[i] = rstart + i;
14878ea901baSHong Zhang 
1488637a0070SStefano Zampini   /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */
148932d7a744SHong Zhang   ierr = MatDenseGetArray(A,&v);CHKERRQ(ierr);
149032d7a744SHong Zhang   ierr = MatSetValues(mat_elemental,m,rows,N,cols,v,ADD_VALUES);CHKERRQ(ierr);
14918ea901baSHong Zhang   ierr = MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
14928ea901baSHong Zhang   ierr = MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
149332d7a744SHong Zhang   ierr = MatDenseRestoreArray(A,&v);CHKERRQ(ierr);
149432d7a744SHong Zhang   ierr = PetscFree2(rows,cols);CHKERRQ(ierr);
14958ea901baSHong Zhang 
1496511c6705SHong Zhang   if (reuse == MAT_INPLACE_MATRIX) {
149728be2f97SBarry Smith     ierr = MatHeaderReplace(A,&mat_elemental);CHKERRQ(ierr);
14988ea901baSHong Zhang   } else {
14998ea901baSHong Zhang     *newmat = mat_elemental;
15008ea901baSHong Zhang   }
15018baccfbdSHong Zhang   PetscFunctionReturn(0);
15028baccfbdSHong Zhang }
150365b80a83SHong Zhang #endif
15048baccfbdSHong Zhang 
1505af53bab2SHong Zhang static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A,PetscInt col,PetscScalar **vals)
150686aefd0dSHong Zhang {
150786aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
150886aefd0dSHong Zhang   PetscErrorCode ierr;
150986aefd0dSHong Zhang 
151086aefd0dSHong Zhang   PetscFunctionBegin;
151186aefd0dSHong Zhang   ierr = MatDenseGetColumn(mat->A,col,vals);CHKERRQ(ierr);
151286aefd0dSHong Zhang   PetscFunctionReturn(0);
151386aefd0dSHong Zhang }
151486aefd0dSHong Zhang 
1515af53bab2SHong Zhang static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A,PetscScalar **vals)
151686aefd0dSHong Zhang {
151786aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
151886aefd0dSHong Zhang   PetscErrorCode ierr;
151986aefd0dSHong Zhang 
152086aefd0dSHong Zhang   PetscFunctionBegin;
152186aefd0dSHong Zhang   ierr = MatDenseRestoreColumn(mat->A,vals);CHKERRQ(ierr);
152286aefd0dSHong Zhang   PetscFunctionReturn(0);
152386aefd0dSHong Zhang }
152486aefd0dSHong Zhang 
152594e2cb23SJakub Kruzik PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm,Mat inmat,PetscInt n,MatReuse scall,Mat *outmat)
152694e2cb23SJakub Kruzik {
152794e2cb23SJakub Kruzik   PetscErrorCode ierr;
152894e2cb23SJakub Kruzik   Mat_MPIDense   *mat;
152994e2cb23SJakub Kruzik   PetscInt       m,nloc,N;
153094e2cb23SJakub Kruzik 
153194e2cb23SJakub Kruzik   PetscFunctionBegin;
153294e2cb23SJakub Kruzik   ierr = MatGetSize(inmat,&m,&N);CHKERRQ(ierr);
153394e2cb23SJakub Kruzik   ierr = MatGetLocalSize(inmat,NULL,&nloc);CHKERRQ(ierr);
153494e2cb23SJakub Kruzik   if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */
153594e2cb23SJakub Kruzik     PetscInt sum;
153694e2cb23SJakub Kruzik 
153794e2cb23SJakub Kruzik     if (n == PETSC_DECIDE) {
153894e2cb23SJakub Kruzik       ierr = PetscSplitOwnership(comm,&n,&N);CHKERRQ(ierr);
153994e2cb23SJakub Kruzik     }
154094e2cb23SJakub Kruzik     /* Check sum(n) = N */
154194e2cb23SJakub Kruzik     ierr = MPIU_Allreduce(&n,&sum,1,MPIU_INT,MPI_SUM,comm);CHKERRQ(ierr);
154294e2cb23SJakub Kruzik     if (sum != N) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Sum of local columns %D != global columns %D",sum,N);
154394e2cb23SJakub Kruzik 
154494e2cb23SJakub Kruzik     ierr = MatCreateDense(comm,m,n,PETSC_DETERMINE,N,NULL,outmat);CHKERRQ(ierr);
154594e2cb23SJakub Kruzik   }
154694e2cb23SJakub Kruzik 
154794e2cb23SJakub Kruzik   /* numeric phase */
154894e2cb23SJakub Kruzik   mat = (Mat_MPIDense*)(*outmat)->data;
154994e2cb23SJakub Kruzik   ierr = MatCopy(inmat,mat->A,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
155094e2cb23SJakub Kruzik   ierr = MatAssemblyBegin(*outmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
155194e2cb23SJakub Kruzik   ierr = MatAssemblyEnd(*outmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
155294e2cb23SJakub Kruzik   PetscFunctionReturn(0);
155394e2cb23SJakub Kruzik }
155494e2cb23SJakub Kruzik 
1555637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1556637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDenseCUDA_MPIDense(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1557637a0070SStefano Zampini {
1558637a0070SStefano Zampini   Mat            B;
1559637a0070SStefano Zampini   Mat_MPIDense   *m;
1560637a0070SStefano Zampini   PetscErrorCode ierr;
1561637a0070SStefano Zampini 
1562637a0070SStefano Zampini   PetscFunctionBegin;
1563637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
1564637a0070SStefano Zampini     ierr = MatDuplicate(M,MAT_COPY_VALUES,newmat);CHKERRQ(ierr);
1565637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
1566637a0070SStefano Zampini     ierr = MatCopy(M,*newmat,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
1567637a0070SStefano Zampini   }
1568637a0070SStefano Zampini 
1569637a0070SStefano Zampini   B    = *newmat;
1570637a0070SStefano Zampini   ierr = MatBindToCPU_MPIDenseCUDA(B,PETSC_TRUE);CHKERRQ(ierr);
1571637a0070SStefano Zampini   ierr = PetscFree(B->defaultvectype);CHKERRQ(ierr);
1572637a0070SStefano Zampini   ierr = PetscStrallocpy(VECSTANDARD,&B->defaultvectype);CHKERRQ(ierr);
1573637a0070SStefano Zampini   ierr = PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSE);CHKERRQ(ierr);
1574637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",NULL);CHKERRQ(ierr);
1575637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",NULL);CHKERRQ(ierr);
1576*6718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",NULL);CHKERRQ(ierr);
1577637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",NULL);CHKERRQ(ierr);
1578*6718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",NULL);CHKERRQ(ierr);
1579637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",NULL);CHKERRQ(ierr);
1580637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",NULL);CHKERRQ(ierr);
1581637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",NULL);CHKERRQ(ierr);
1582637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",NULL);CHKERRQ(ierr);
1583637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",NULL);CHKERRQ(ierr);
1584637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",NULL);CHKERRQ(ierr);
1585637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",NULL);CHKERRQ(ierr);
1586637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",NULL);CHKERRQ(ierr);
1587d5ea218eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",NULL);CHKERRQ(ierr);
1588637a0070SStefano Zampini   m    = (Mat_MPIDense*)(B)->data;
1589637a0070SStefano Zampini   if (m->A) {
1590637a0070SStefano Zampini     ierr = MatConvert(m->A,MATSEQDENSE,MAT_INPLACE_MATRIX,&m->A);CHKERRQ(ierr);
1591637a0070SStefano Zampini     ierr = MatSetUpMultiply_MPIDense(B);CHKERRQ(ierr);
1592637a0070SStefano Zampini   }
1593637a0070SStefano Zampini   B->ops->bindtocpu = NULL;
1594637a0070SStefano Zampini   B->offloadmask    = PETSC_OFFLOAD_CPU;
1595637a0070SStefano Zampini   PetscFunctionReturn(0);
1596637a0070SStefano Zampini }
1597637a0070SStefano Zampini 
1598637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDense_MPIDenseCUDA(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1599637a0070SStefano Zampini {
1600637a0070SStefano Zampini   Mat            B;
1601637a0070SStefano Zampini   Mat_MPIDense   *m;
1602637a0070SStefano Zampini   PetscErrorCode ierr;
1603637a0070SStefano Zampini 
1604637a0070SStefano Zampini   PetscFunctionBegin;
1605637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
1606637a0070SStefano Zampini     ierr = MatDuplicate(M,MAT_COPY_VALUES,newmat);CHKERRQ(ierr);
1607637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
1608637a0070SStefano Zampini     ierr = MatCopy(M,*newmat,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
1609637a0070SStefano Zampini   }
1610637a0070SStefano Zampini 
1611637a0070SStefano Zampini   B    = *newmat;
1612637a0070SStefano Zampini   ierr = PetscFree(B->defaultvectype);CHKERRQ(ierr);
1613637a0070SStefano Zampini   ierr = PetscStrallocpy(VECCUDA,&B->defaultvectype);CHKERRQ(ierr);
1614637a0070SStefano Zampini   ierr = PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSECUDA);CHKERRQ(ierr);
1615637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",                    MatConvert_MPIDenseCUDA_MPIDense);CHKERRQ(ierr);
1616637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",        MatProductSetFromOptions_MPIAIJ_MPIDense);CHKERRQ(ierr);
1617*6718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",MatProductSetFromOptions_MPIAIJ_MPIDense);CHKERRQ(ierr);
1618637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",        MatProductSetFromOptions_MPIDense_MPIAIJ);CHKERRQ(ierr);
1619*6718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ);CHKERRQ(ierr);
1620637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",                                MatDenseCUDAGetArray_MPIDenseCUDA);CHKERRQ(ierr);
1621637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",                            MatDenseCUDAGetArrayRead_MPIDenseCUDA);CHKERRQ(ierr);
1622637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",                           MatDenseCUDAGetArrayWrite_MPIDenseCUDA);CHKERRQ(ierr);
1623637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",                            MatDenseCUDARestoreArray_MPIDenseCUDA);CHKERRQ(ierr);
1624637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",                        MatDenseCUDARestoreArrayRead_MPIDenseCUDA);CHKERRQ(ierr);
1625637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",                       MatDenseCUDARestoreArrayWrite_MPIDenseCUDA);CHKERRQ(ierr);
1626637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",                              MatDenseCUDAPlaceArray_MPIDenseCUDA);CHKERRQ(ierr);
1627637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",                              MatDenseCUDAResetArray_MPIDenseCUDA);CHKERRQ(ierr);
1628d5ea218eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",                            MatDenseCUDAReplaceArray_MPIDenseCUDA);CHKERRQ(ierr);
1629637a0070SStefano Zampini   m    = (Mat_MPIDense*)(B)->data;
1630637a0070SStefano Zampini   if (m->A) {
1631637a0070SStefano Zampini     ierr = MatConvert(m->A,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&m->A);CHKERRQ(ierr);
1632637a0070SStefano Zampini     ierr = MatSetUpMultiply_MPIDense(B);CHKERRQ(ierr);
1633637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_BOTH;
1634637a0070SStefano Zampini   } else {
1635637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_UNALLOCATED;
1636637a0070SStefano Zampini   }
1637637a0070SStefano Zampini   ierr = MatBindToCPU_MPIDenseCUDA(B,PETSC_FALSE);CHKERRQ(ierr);
1638637a0070SStefano Zampini 
1639637a0070SStefano Zampini   B->ops->bindtocpu = MatBindToCPU_MPIDenseCUDA;
1640637a0070SStefano Zampini   PetscFunctionReturn(0);
1641637a0070SStefano Zampini }
1642637a0070SStefano Zampini #endif
1643637a0070SStefano Zampini 
16446947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
16456947451fSStefano Zampini {
16466947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
16476947451fSStefano Zampini   PetscErrorCode ierr;
16486947451fSStefano Zampini   PetscInt       lda;
16496947451fSStefano Zampini 
16506947451fSStefano Zampini   PetscFunctionBegin;
16516947451fSStefano Zampini   if (a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec first");
16526947451fSStefano Zampini   if (!a->cvec) {
16536947451fSStefano Zampini     ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
16546947451fSStefano Zampini   }
16556947451fSStefano Zampini   a->vecinuse = col + 1;
16566947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
16576947451fSStefano Zampini   ierr = MatDenseGetArray(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
16586947451fSStefano Zampini   ierr = VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
16596947451fSStefano Zampini   *v   = a->cvec;
16606947451fSStefano Zampini   PetscFunctionReturn(0);
16616947451fSStefano Zampini }
16626947451fSStefano Zampini 
16636947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
16646947451fSStefano Zampini {
16656947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
16666947451fSStefano Zampini   PetscErrorCode ierr;
16676947451fSStefano Zampini 
16686947451fSStefano Zampini   PetscFunctionBegin;
16696947451fSStefano Zampini   if (!a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec first");
16706947451fSStefano Zampini   if (!a->cvec) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
16716947451fSStefano Zampini   a->vecinuse = 0;
16726947451fSStefano Zampini   ierr = MatDenseRestoreArray(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
16736947451fSStefano Zampini   ierr = VecResetArray(a->cvec);CHKERRQ(ierr);
16746947451fSStefano Zampini   *v   = NULL;
16756947451fSStefano Zampini   PetscFunctionReturn(0);
16766947451fSStefano Zampini }
16776947451fSStefano Zampini 
16786947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
16796947451fSStefano Zampini {
16806947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
16816947451fSStefano Zampini   PetscErrorCode ierr;
16826947451fSStefano Zampini   PetscInt       lda;
16836947451fSStefano Zampini 
16846947451fSStefano Zampini   PetscFunctionBegin;
16856947451fSStefano Zampini   if (a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec first");
16866947451fSStefano Zampini   if (!a->cvec) {
16876947451fSStefano Zampini     ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
16886947451fSStefano Zampini   }
16896947451fSStefano Zampini   a->vecinuse = col + 1;
16906947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
16916947451fSStefano Zampini   ierr = MatDenseGetArrayRead(a->A,&a->ptrinuse);CHKERRQ(ierr);
16926947451fSStefano Zampini   ierr = VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
16936947451fSStefano Zampini   ierr = VecLockReadPush(a->cvec);CHKERRQ(ierr);
16946947451fSStefano Zampini   *v   = a->cvec;
16956947451fSStefano Zampini   PetscFunctionReturn(0);
16966947451fSStefano Zampini }
16976947451fSStefano Zampini 
16986947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
16996947451fSStefano Zampini {
17006947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17016947451fSStefano Zampini   PetscErrorCode ierr;
17026947451fSStefano Zampini 
17036947451fSStefano Zampini   PetscFunctionBegin;
17046947451fSStefano Zampini   if (!a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec first");
17056947451fSStefano Zampini   if (!a->cvec) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
17066947451fSStefano Zampini   a->vecinuse = 0;
17076947451fSStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,&a->ptrinuse);CHKERRQ(ierr);
17086947451fSStefano Zampini   ierr = VecLockReadPop(a->cvec);CHKERRQ(ierr);
17096947451fSStefano Zampini   ierr = VecResetArray(a->cvec);CHKERRQ(ierr);
17106947451fSStefano Zampini   *v   = NULL;
17116947451fSStefano Zampini   PetscFunctionReturn(0);
17126947451fSStefano Zampini }
17136947451fSStefano Zampini 
17146947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
17156947451fSStefano Zampini {
17166947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17176947451fSStefano Zampini   PetscErrorCode ierr;
17186947451fSStefano Zampini   PetscInt       lda;
17196947451fSStefano Zampini 
17206947451fSStefano Zampini   PetscFunctionBegin;
17216947451fSStefano Zampini   if (a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec first");
17226947451fSStefano Zampini   if (!a->cvec) {
17236947451fSStefano Zampini     ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
17246947451fSStefano Zampini   }
17256947451fSStefano Zampini   a->vecinuse = col + 1;
17266947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
17276947451fSStefano Zampini   ierr = MatDenseGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
17286947451fSStefano Zampini   ierr = VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
17296947451fSStefano Zampini   *v   = a->cvec;
17306947451fSStefano Zampini   PetscFunctionReturn(0);
17316947451fSStefano Zampini }
17326947451fSStefano Zampini 
17336947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
17346947451fSStefano Zampini {
17356947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17366947451fSStefano Zampini   PetscErrorCode ierr;
17376947451fSStefano Zampini 
17386947451fSStefano Zampini   PetscFunctionBegin;
17396947451fSStefano Zampini   if (!a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec first");
17406947451fSStefano Zampini   if (!a->cvec) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
17416947451fSStefano Zampini   a->vecinuse = 0;
17426947451fSStefano Zampini   ierr = MatDenseRestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
17436947451fSStefano Zampini   ierr = VecResetArray(a->cvec);CHKERRQ(ierr);
17446947451fSStefano Zampini   *v   = NULL;
17456947451fSStefano Zampini   PetscFunctionReturn(0);
17466947451fSStefano Zampini }
17476947451fSStefano Zampini 
17488cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreate_MPIDense(Mat mat)
1749273d9f13SBarry Smith {
1750273d9f13SBarry Smith   Mat_MPIDense   *a;
1751dfbe8321SBarry Smith   PetscErrorCode ierr;
1752273d9f13SBarry Smith 
1753273d9f13SBarry Smith   PetscFunctionBegin;
1754b00a9115SJed Brown   ierr      = PetscNewLog(mat,&a);CHKERRQ(ierr);
1755b0a32e0cSBarry Smith   mat->data = (void*)a;
1756273d9f13SBarry Smith   ierr      = PetscMemcpy(mat->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1757273d9f13SBarry Smith 
1758273d9f13SBarry Smith   mat->insertmode = NOT_SET_VALUES;
1759ce94432eSBarry Smith   ierr            = MPI_Comm_rank(PetscObjectComm((PetscObject)mat),&a->rank);CHKERRQ(ierr);
1760ce94432eSBarry Smith   ierr            = MPI_Comm_size(PetscObjectComm((PetscObject)mat),&a->size);CHKERRQ(ierr);
1761273d9f13SBarry Smith 
1762273d9f13SBarry Smith   /* build cache for off array entries formed */
1763273d9f13SBarry Smith   a->donotstash = PETSC_FALSE;
17642205254eSKarl Rupp 
1765ce94432eSBarry Smith   ierr = MatStashCreate_Private(PetscObjectComm((PetscObject)mat),1,&mat->stash);CHKERRQ(ierr);
1766273d9f13SBarry Smith 
1767273d9f13SBarry Smith   /* stuff used for matrix vector multiply */
1768273d9f13SBarry Smith   a->lvec        = 0;
1769273d9f13SBarry Smith   a->Mvctx       = 0;
1770273d9f13SBarry Smith   a->roworiented = PETSC_TRUE;
1771273d9f13SBarry Smith 
177249a6ff4bSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",MatDenseGetLDA_MPIDense);CHKERRQ(ierr);
1773ad16ce7aSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",MatDenseSetLDA_MPIDense);CHKERRQ(ierr);
1774bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",MatDenseGetArray_MPIDense);CHKERRQ(ierr);
17758572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",MatDenseRestoreArray_MPIDense);CHKERRQ(ierr);
17768572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",MatDenseGetArrayRead_MPIDense);CHKERRQ(ierr);
17778572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",MatDenseRestoreArrayRead_MPIDense);CHKERRQ(ierr);
17786947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",MatDenseGetArrayWrite_MPIDense);CHKERRQ(ierr);
17796947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",MatDenseRestoreArrayWrite_MPIDense);CHKERRQ(ierr);
1780d3042a70SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",MatDensePlaceArray_MPIDense);CHKERRQ(ierr);
1781d3042a70SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",MatDenseResetArray_MPIDense);CHKERRQ(ierr);
1782d5ea218eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",MatDenseReplaceArray_MPIDense);CHKERRQ(ierr);
17836947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense);CHKERRQ(ierr);
17846947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense);CHKERRQ(ierr);
17856947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense);CHKERRQ(ierr);
17866947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense);CHKERRQ(ierr);
17876947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense);CHKERRQ(ierr);
17886947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense);CHKERRQ(ierr);
17898baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
17908baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",MatConvert_MPIDense_Elemental);CHKERRQ(ierr);
17918baccfbdSHong Zhang #endif
1792637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1793637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpidensecuda_C",MatConvert_MPIDense_MPIDenseCUDA);CHKERRQ(ierr);
1794637a0070SStefano Zampini #endif
1795bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",MatMPIDenseSetPreallocation_MPIDense);CHKERRQ(ierr);
17964222ddf1SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense);CHKERRQ(ierr);
17974222ddf1SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",MatProductSetFromOptions_MPIDense_MPIAIJ);CHKERRQ(ierr);
1798*6718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
1799*6718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense);CHKERRQ(ierr);
1800*6718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ);CHKERRQ(ierr);
1801*6718818eSStefano Zampini #endif
18028949adfdSHong Zhang 
1803af53bab2SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",MatDenseGetColumn_MPIDense);CHKERRQ(ierr);
1804af53bab2SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",MatDenseRestoreColumn_MPIDense);CHKERRQ(ierr);
180538aed534SBarry Smith   ierr = PetscObjectChangeTypeName((PetscObject)mat,MATMPIDENSE);CHKERRQ(ierr);
1806273d9f13SBarry Smith   PetscFunctionReturn(0);
1807273d9f13SBarry Smith }
1808273d9f13SBarry Smith 
1809209238afSKris Buschelman /*MC
1810637a0070SStefano Zampini    MATMPIDENSECUDA - MATMPIDENSECUDA = "mpidensecuda" - A matrix type to be used for distributed dense matrices on GPUs.
1811637a0070SStefano Zampini 
1812637a0070SStefano Zampini    Options Database Keys:
1813637a0070SStefano Zampini . -mat_type mpidensecuda - sets the matrix type to "mpidensecuda" during a call to MatSetFromOptions()
1814637a0070SStefano Zampini 
1815637a0070SStefano Zampini   Level: beginner
1816637a0070SStefano Zampini 
1817637a0070SStefano Zampini .seealso:
1818637a0070SStefano Zampini 
1819637a0070SStefano Zampini M*/
1820637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1821637a0070SStefano Zampini PETSC_EXTERN PetscErrorCode MatCreate_MPIDenseCUDA(Mat B)
1822637a0070SStefano Zampini {
1823637a0070SStefano Zampini   PetscErrorCode ierr;
1824637a0070SStefano Zampini 
1825637a0070SStefano Zampini   PetscFunctionBegin;
1826637a0070SStefano Zampini   ierr = MatCreate_MPIDense(B);CHKERRQ(ierr);
1827637a0070SStefano Zampini   ierr = MatConvert_MPIDense_MPIDenseCUDA(B,MATMPIDENSECUDA,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr);
1828637a0070SStefano Zampini   PetscFunctionReturn(0);
1829637a0070SStefano Zampini }
1830637a0070SStefano Zampini #endif
1831637a0070SStefano Zampini 
1832637a0070SStefano Zampini /*MC
1833002d173eSKris Buschelman    MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices.
1834209238afSKris Buschelman 
1835209238afSKris Buschelman    This matrix type is identical to MATSEQDENSE when constructed with a single process communicator,
1836209238afSKris Buschelman    and MATMPIDENSE otherwise.
1837209238afSKris Buschelman 
1838209238afSKris Buschelman    Options Database Keys:
1839209238afSKris Buschelman . -mat_type dense - sets the matrix type to "dense" during a call to MatSetFromOptions()
1840209238afSKris Buschelman 
1841209238afSKris Buschelman   Level: beginner
1842209238afSKris Buschelman 
184301b82886SBarry Smith 
18446947451fSStefano Zampini .seealso: MATSEQDENSE,MATMPIDENSE,MATDENSECUDA
18456947451fSStefano Zampini M*/
18466947451fSStefano Zampini 
18476947451fSStefano Zampini /*MC
18486947451fSStefano Zampini    MATDENSECUDA - MATDENSECUDA = "densecuda" - A matrix type to be used for dense matrices on GPUs.
18496947451fSStefano Zampini 
18506947451fSStefano Zampini    This matrix type is identical to MATSEQDENSECUDA when constructed with a single process communicator,
18516947451fSStefano Zampini    and MATMPIDENSECUDA otherwise.
18526947451fSStefano Zampini 
18536947451fSStefano Zampini    Options Database Keys:
18546947451fSStefano Zampini . -mat_type densecuda - sets the matrix type to "densecuda" during a call to MatSetFromOptions()
18556947451fSStefano Zampini 
18566947451fSStefano Zampini   Level: beginner
18576947451fSStefano Zampini 
18586947451fSStefano Zampini .seealso: MATSEQDENSECUDA,MATMPIDENSECUDA,MATDENSE
1859209238afSKris Buschelman M*/
1860209238afSKris Buschelman 
1861273d9f13SBarry Smith /*@C
1862273d9f13SBarry Smith    MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries
1863273d9f13SBarry Smith 
1864273d9f13SBarry Smith    Not collective
1865273d9f13SBarry Smith 
1866273d9f13SBarry Smith    Input Parameters:
18671c4f3114SJed Brown .  B - the matrix
18680298fd71SBarry Smith -  data - optional location of matrix data.  Set data=NULL for PETSc
1869273d9f13SBarry Smith    to control all matrix memory allocation.
1870273d9f13SBarry Smith 
1871273d9f13SBarry Smith    Notes:
1872273d9f13SBarry Smith    The dense format is fully compatible with standard Fortran 77
1873273d9f13SBarry Smith    storage by columns.
1874273d9f13SBarry Smith 
1875273d9f13SBarry Smith    The data input variable is intended primarily for Fortran programmers
1876273d9f13SBarry Smith    who wish to allocate their own matrix memory space.  Most users should
18770298fd71SBarry Smith    set data=NULL.
1878273d9f13SBarry Smith 
1879273d9f13SBarry Smith    Level: intermediate
1880273d9f13SBarry Smith 
1881273d9f13SBarry Smith .seealso: MatCreate(), MatCreateSeqDense(), MatSetValues()
1882273d9f13SBarry Smith @*/
18831c4f3114SJed Brown PetscErrorCode  MatMPIDenseSetPreallocation(Mat B,PetscScalar *data)
1884273d9f13SBarry Smith {
18854ac538c5SBarry Smith   PetscErrorCode ierr;
1886273d9f13SBarry Smith 
1887273d9f13SBarry Smith   PetscFunctionBegin;
1888d5ea218eSStefano Zampini   PetscValidHeaderSpecific(B,MAT_CLASSID,1);
18891c4f3114SJed Brown   ierr = PetscTryMethod(B,"MatMPIDenseSetPreallocation_C",(Mat,PetscScalar*),(B,data));CHKERRQ(ierr);
1890273d9f13SBarry Smith   PetscFunctionReturn(0);
1891273d9f13SBarry Smith }
1892273d9f13SBarry Smith 
1893d3042a70SBarry Smith /*@
1894637a0070SStefano Zampini    MatDensePlaceArray - Allows one to replace the array in a dense matrix with an
1895d3042a70SBarry Smith    array provided by the user. This is useful to avoid copying an array
1896d3042a70SBarry Smith    into a matrix
1897d3042a70SBarry Smith 
1898d3042a70SBarry Smith    Not Collective
1899d3042a70SBarry Smith 
1900d3042a70SBarry Smith    Input Parameters:
1901d3042a70SBarry Smith +  mat - the matrix
1902d3042a70SBarry Smith -  array - the array in column major order
1903d3042a70SBarry Smith 
1904d3042a70SBarry Smith    Notes:
1905d3042a70SBarry Smith    You can return to the original array with a call to MatDenseResetArray(). The user is responsible for freeing this array; it will not be
1906d3042a70SBarry Smith    freed when the matrix is destroyed.
1907d3042a70SBarry Smith 
1908d3042a70SBarry Smith    Level: developer
1909d3042a70SBarry Smith 
1910d3042a70SBarry Smith .seealso: MatDenseGetArray(), MatDenseResetArray(), VecPlaceArray(), VecGetArray(), VecRestoreArray(), VecReplaceArray(), VecResetArray()
1911d3042a70SBarry Smith 
1912d3042a70SBarry Smith @*/
1913637a0070SStefano Zampini PetscErrorCode  MatDensePlaceArray(Mat mat,const PetscScalar *array)
1914d3042a70SBarry Smith {
1915d3042a70SBarry Smith   PetscErrorCode ierr;
1916637a0070SStefano Zampini 
1917d3042a70SBarry Smith   PetscFunctionBegin;
1918d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
1919d3042a70SBarry Smith   ierr = PetscUseMethod(mat,"MatDensePlaceArray_C",(Mat,const PetscScalar*),(mat,array));CHKERRQ(ierr);
1920d3042a70SBarry Smith   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
1921637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1922637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
1923637a0070SStefano Zampini #endif
1924d3042a70SBarry Smith   PetscFunctionReturn(0);
1925d3042a70SBarry Smith }
1926d3042a70SBarry Smith 
1927d3042a70SBarry Smith /*@
1928d3042a70SBarry Smith    MatDenseResetArray - Resets the matrix array to that it previously had before the call to MatDensePlaceArray()
1929d3042a70SBarry Smith 
1930d3042a70SBarry Smith    Not Collective
1931d3042a70SBarry Smith 
1932d3042a70SBarry Smith    Input Parameters:
1933d3042a70SBarry Smith .  mat - the matrix
1934d3042a70SBarry Smith 
1935d3042a70SBarry Smith    Notes:
1936d3042a70SBarry Smith    You can only call this after a call to MatDensePlaceArray()
1937d3042a70SBarry Smith 
1938d3042a70SBarry Smith    Level: developer
1939d3042a70SBarry Smith 
1940d3042a70SBarry Smith .seealso: MatDenseGetArray(), MatDensePlaceArray(), VecPlaceArray(), VecGetArray(), VecRestoreArray(), VecReplaceArray(), VecResetArray()
1941d3042a70SBarry Smith 
1942d3042a70SBarry Smith @*/
1943d3042a70SBarry Smith PetscErrorCode  MatDenseResetArray(Mat mat)
1944d3042a70SBarry Smith {
1945d3042a70SBarry Smith   PetscErrorCode ierr;
1946637a0070SStefano Zampini 
1947d3042a70SBarry Smith   PetscFunctionBegin;
1948d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
1949d3042a70SBarry Smith   ierr = PetscUseMethod(mat,"MatDenseResetArray_C",(Mat),(mat));CHKERRQ(ierr);
1950d3042a70SBarry Smith   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
1951d3042a70SBarry Smith   PetscFunctionReturn(0);
1952d3042a70SBarry Smith }
1953d3042a70SBarry Smith 
1954d5ea218eSStefano Zampini /*@
1955d5ea218eSStefano Zampini    MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an
1956d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
1957d5ea218eSStefano Zampini    into a matrix
1958d5ea218eSStefano Zampini 
1959d5ea218eSStefano Zampini    Not Collective
1960d5ea218eSStefano Zampini 
1961d5ea218eSStefano Zampini    Input Parameters:
1962d5ea218eSStefano Zampini +  mat - the matrix
1963d5ea218eSStefano Zampini -  array - the array in column major order
1964d5ea218eSStefano Zampini 
1965d5ea218eSStefano Zampini    Notes:
1966d5ea218eSStefano Zampini    The memory passed in MUST be obtained with PetscMalloc() and CANNOT be
1967d5ea218eSStefano Zampini    freed by the user. It will be freed when the matrix is destroyed.
1968d5ea218eSStefano Zampini 
1969d5ea218eSStefano Zampini    Level: developer
1970d5ea218eSStefano Zampini 
1971d5ea218eSStefano Zampini .seealso: MatDenseGetArray(), VecReplaceArray()
1972d5ea218eSStefano Zampini @*/
1973d5ea218eSStefano Zampini PetscErrorCode  MatDenseReplaceArray(Mat mat,const PetscScalar *array)
1974d5ea218eSStefano Zampini {
1975d5ea218eSStefano Zampini   PetscErrorCode ierr;
1976d5ea218eSStefano Zampini 
1977d5ea218eSStefano Zampini   PetscFunctionBegin;
1978d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
1979d5ea218eSStefano Zampini   ierr = PetscUseMethod(mat,"MatDenseReplaceArray_C",(Mat,const PetscScalar*),(mat,array));CHKERRQ(ierr);
1980d5ea218eSStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
1981d5ea218eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
1982d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
1983d5ea218eSStefano Zampini #endif
1984d5ea218eSStefano Zampini   PetscFunctionReturn(0);
1985d5ea218eSStefano Zampini }
1986d5ea218eSStefano Zampini 
1987637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
19888965ea79SLois Curfman McInnes /*@C
1989637a0070SStefano Zampini    MatDenseCUDAPlaceArray - Allows one to replace the GPU array in a dense matrix with an
1990637a0070SStefano Zampini    array provided by the user. This is useful to avoid copying an array
1991637a0070SStefano Zampini    into a matrix
1992637a0070SStefano Zampini 
1993637a0070SStefano Zampini    Not Collective
1994637a0070SStefano Zampini 
1995637a0070SStefano Zampini    Input Parameters:
1996637a0070SStefano Zampini +  mat - the matrix
1997637a0070SStefano Zampini -  array - the array in column major order
1998637a0070SStefano Zampini 
1999637a0070SStefano Zampini    Notes:
2000637a0070SStefano Zampini    You can return to the original array with a call to MatDenseCUDAResetArray(). The user is responsible for freeing this array; it will not be
2001637a0070SStefano Zampini    freed when the matrix is destroyed. The array must have been allocated with cudaMalloc().
2002637a0070SStefano Zampini 
2003637a0070SStefano Zampini    Level: developer
2004637a0070SStefano Zampini 
2005637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAResetArray()
2006637a0070SStefano Zampini @*/
2007637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAPlaceArray(Mat mat,const PetscScalar *array)
2008637a0070SStefano Zampini {
2009637a0070SStefano Zampini   PetscErrorCode ierr;
2010637a0070SStefano Zampini 
2011637a0070SStefano Zampini   PetscFunctionBegin;
2012d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2013637a0070SStefano Zampini   ierr = PetscUseMethod(mat,"MatDenseCUDAPlaceArray_C",(Mat,const PetscScalar*),(mat,array));CHKERRQ(ierr);
2014637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2015637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2016637a0070SStefano Zampini   PetscFunctionReturn(0);
2017637a0070SStefano Zampini }
2018637a0070SStefano Zampini 
2019637a0070SStefano Zampini /*@C
2020637a0070SStefano Zampini    MatDenseCUDAResetArray - Resets the matrix array to that it previously had before the call to MatDenseCUDAPlaceArray()
2021637a0070SStefano Zampini 
2022637a0070SStefano Zampini    Not Collective
2023637a0070SStefano Zampini 
2024637a0070SStefano Zampini    Input Parameters:
2025637a0070SStefano Zampini .  mat - the matrix
2026637a0070SStefano Zampini 
2027637a0070SStefano Zampini    Notes:
2028637a0070SStefano Zampini    You can only call this after a call to MatDenseCUDAPlaceArray()
2029637a0070SStefano Zampini 
2030637a0070SStefano Zampini    Level: developer
2031637a0070SStefano Zampini 
2032637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAPlaceArray()
2033637a0070SStefano Zampini 
2034637a0070SStefano Zampini @*/
2035637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAResetArray(Mat mat)
2036637a0070SStefano Zampini {
2037637a0070SStefano Zampini   PetscErrorCode ierr;
2038637a0070SStefano Zampini 
2039637a0070SStefano Zampini   PetscFunctionBegin;
2040d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2041637a0070SStefano Zampini   ierr = PetscUseMethod(mat,"MatDenseCUDAResetArray_C",(Mat),(mat));CHKERRQ(ierr);
2042637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2043637a0070SStefano Zampini   PetscFunctionReturn(0);
2044637a0070SStefano Zampini }
2045637a0070SStefano Zampini 
2046637a0070SStefano Zampini /*@C
2047d5ea218eSStefano Zampini    MatDenseCUDAReplaceArray - Allows one to replace the GPU array in a dense matrix with an
2048d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2049d5ea218eSStefano Zampini    into a matrix
2050d5ea218eSStefano Zampini 
2051d5ea218eSStefano Zampini    Not Collective
2052d5ea218eSStefano Zampini 
2053d5ea218eSStefano Zampini    Input Parameters:
2054d5ea218eSStefano Zampini +  mat - the matrix
2055d5ea218eSStefano Zampini -  array - the array in column major order
2056d5ea218eSStefano Zampini 
2057d5ea218eSStefano Zampini    Notes:
2058d5ea218eSStefano Zampini    This permanently replaces the GPU array and frees the memory associated with the old GPU array.
2059d5ea218eSStefano Zampini    The memory passed in CANNOT be freed by the user. It will be freed
2060d5ea218eSStefano Zampini    when the matrix is destroyed. The array should respect the matrix leading dimension.
2061d5ea218eSStefano Zampini 
2062d5ea218eSStefano Zampini    Level: developer
2063d5ea218eSStefano Zampini 
2064d5ea218eSStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAPlaceArray(), MatDenseCUDAResetArray()
2065d5ea218eSStefano Zampini @*/
2066d5ea218eSStefano Zampini PetscErrorCode  MatDenseCUDAReplaceArray(Mat mat,const PetscScalar *array)
2067d5ea218eSStefano Zampini {
2068d5ea218eSStefano Zampini   PetscErrorCode ierr;
2069d5ea218eSStefano Zampini 
2070d5ea218eSStefano Zampini   PetscFunctionBegin;
2071d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2072d5ea218eSStefano Zampini   ierr = PetscUseMethod(mat,"MatDenseCUDAReplaceArray_C",(Mat,const PetscScalar*),(mat,array));CHKERRQ(ierr);
2073d5ea218eSStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2074d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2075d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2076d5ea218eSStefano Zampini }
2077d5ea218eSStefano Zampini 
2078d5ea218eSStefano Zampini /*@C
2079637a0070SStefano Zampini    MatDenseCUDAGetArrayWrite - Provides write access to the CUDA buffer inside a dense matrix.
2080637a0070SStefano Zampini 
2081637a0070SStefano Zampini    Not Collective
2082637a0070SStefano Zampini 
2083637a0070SStefano Zampini    Input Parameters:
2084637a0070SStefano Zampini .  A - the matrix
2085637a0070SStefano Zampini 
2086637a0070SStefano Zampini    Output Parameters
2087637a0070SStefano Zampini .  array - the GPU array in column major order
2088637a0070SStefano Zampini 
2089637a0070SStefano Zampini    Notes:
2090637a0070SStefano Zampini    The data on the GPU may not be updated due to operations done on the CPU. If you need updated data, use MatDenseCUDAGetArray(). The array must be restored with MatDenseCUDARestoreArrayWrite() when no longer needed.
2091637a0070SStefano Zampini 
2092637a0070SStefano Zampini    Level: developer
2093637a0070SStefano Zampini 
2094637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayRead(), MatDenseCUDARestoreArrayRead()
2095637a0070SStefano Zampini @*/
2096637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayWrite(Mat A, PetscScalar **a)
2097637a0070SStefano Zampini {
2098637a0070SStefano Zampini   PetscErrorCode ierr;
2099637a0070SStefano Zampini 
2100637a0070SStefano Zampini   PetscFunctionBegin;
2101d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2102637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDAGetArrayWrite_C",(Mat,PetscScalar**),(A,a));CHKERRQ(ierr);
2103637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr);
2104637a0070SStefano Zampini   PetscFunctionReturn(0);
2105637a0070SStefano Zampini }
2106637a0070SStefano Zampini 
2107637a0070SStefano Zampini /*@C
2108637a0070SStefano Zampini    MatDenseCUDARestoreArrayWrite - Restore write access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArrayWrite().
2109637a0070SStefano Zampini 
2110637a0070SStefano Zampini    Not Collective
2111637a0070SStefano Zampini 
2112637a0070SStefano Zampini    Input Parameters:
2113637a0070SStefano Zampini +  A - the matrix
2114637a0070SStefano Zampini -  array - the GPU array in column major order
2115637a0070SStefano Zampini 
2116637a0070SStefano Zampini    Notes:
2117637a0070SStefano Zampini 
2118637a0070SStefano Zampini    Level: developer
2119637a0070SStefano Zampini 
2120637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead(), MatDenseCUDAGetArrayRead()
2121637a0070SStefano Zampini @*/
2122637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayWrite(Mat A, PetscScalar **a)
2123637a0070SStefano Zampini {
2124637a0070SStefano Zampini   PetscErrorCode ierr;
2125637a0070SStefano Zampini 
2126637a0070SStefano Zampini   PetscFunctionBegin;
2127d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2128637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDARestoreArrayWrite_C",(Mat,PetscScalar**),(A,a));CHKERRQ(ierr);
2129637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr);
2130637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2131637a0070SStefano Zampini   PetscFunctionReturn(0);
2132637a0070SStefano Zampini }
2133637a0070SStefano Zampini 
2134637a0070SStefano Zampini /*@C
2135637a0070SStefano Zampini    MatDenseCUDAGetArrayRead - Provides read-only access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArrayRead() when no longer needed.
2136637a0070SStefano Zampini 
2137637a0070SStefano Zampini    Not Collective
2138637a0070SStefano Zampini 
2139637a0070SStefano Zampini    Input Parameters:
2140637a0070SStefano Zampini .  A - the matrix
2141637a0070SStefano Zampini 
2142637a0070SStefano Zampini    Output Parameters
2143637a0070SStefano Zampini .  array - the GPU array in column major order
2144637a0070SStefano Zampini 
2145637a0070SStefano Zampini    Notes:
2146637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2147637a0070SStefano Zampini 
2148637a0070SStefano Zampini    Level: developer
2149637a0070SStefano Zampini 
2150637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead()
2151637a0070SStefano Zampini @*/
2152637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayRead(Mat A, const PetscScalar **a)
2153637a0070SStefano Zampini {
2154637a0070SStefano Zampini   PetscErrorCode ierr;
2155637a0070SStefano Zampini 
2156637a0070SStefano Zampini   PetscFunctionBegin;
2157d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2158637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDAGetArrayRead_C",(Mat,const PetscScalar**),(A,a));CHKERRQ(ierr);
2159637a0070SStefano Zampini   PetscFunctionReturn(0);
2160637a0070SStefano Zampini }
2161637a0070SStefano Zampini 
2162637a0070SStefano Zampini /*@C
2163637a0070SStefano Zampini    MatDenseCUDARestoreArrayRead - Restore read-only access to the CUDA buffer inside a dense matrix previously obtained with a call to MatDenseCUDAGetArrayRead().
2164637a0070SStefano Zampini 
2165637a0070SStefano Zampini    Not Collective
2166637a0070SStefano Zampini 
2167637a0070SStefano Zampini    Input Parameters:
2168637a0070SStefano Zampini +  A - the matrix
2169637a0070SStefano Zampini -  array - the GPU array in column major order
2170637a0070SStefano Zampini 
2171637a0070SStefano Zampini    Notes:
2172637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2173637a0070SStefano Zampini 
2174637a0070SStefano Zampini    Level: developer
2175637a0070SStefano Zampini 
2176637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDAGetArrayRead()
2177637a0070SStefano Zampini @*/
2178637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayRead(Mat A, const PetscScalar **a)
2179637a0070SStefano Zampini {
2180637a0070SStefano Zampini   PetscErrorCode ierr;
2181637a0070SStefano Zampini 
2182637a0070SStefano Zampini   PetscFunctionBegin;
2183637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDARestoreArrayRead_C",(Mat,const PetscScalar**),(A,a));CHKERRQ(ierr);
2184637a0070SStefano Zampini   PetscFunctionReturn(0);
2185637a0070SStefano Zampini }
2186637a0070SStefano Zampini 
2187637a0070SStefano Zampini /*@C
2188637a0070SStefano Zampini    MatDenseCUDAGetArray - Provides access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArray() when no longer needed.
2189637a0070SStefano Zampini 
2190637a0070SStefano Zampini    Not Collective
2191637a0070SStefano Zampini 
2192637a0070SStefano Zampini    Input Parameters:
2193637a0070SStefano Zampini .  A - the matrix
2194637a0070SStefano Zampini 
2195637a0070SStefano Zampini    Output Parameters
2196637a0070SStefano Zampini .  array - the GPU array in column major order
2197637a0070SStefano Zampini 
2198637a0070SStefano Zampini    Notes:
2199637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite(). For read-only access, use MatDenseCUDAGetArrayRead().
2200637a0070SStefano Zampini 
2201637a0070SStefano Zampini    Level: developer
2202637a0070SStefano Zampini 
2203637a0070SStefano Zampini .seealso: MatDenseCUDAGetArrayRead(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead()
2204637a0070SStefano Zampini @*/
2205637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArray(Mat A, PetscScalar **a)
2206637a0070SStefano Zampini {
2207637a0070SStefano Zampini   PetscErrorCode ierr;
2208637a0070SStefano Zampini 
2209637a0070SStefano Zampini   PetscFunctionBegin;
2210d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2211637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDAGetArray_C",(Mat,PetscScalar**),(A,a));CHKERRQ(ierr);
2212637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr);
2213637a0070SStefano Zampini   PetscFunctionReturn(0);
2214637a0070SStefano Zampini }
2215637a0070SStefano Zampini 
2216637a0070SStefano Zampini /*@C
2217637a0070SStefano Zampini    MatDenseCUDARestoreArray - Restore access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArray().
2218637a0070SStefano Zampini 
2219637a0070SStefano Zampini    Not Collective
2220637a0070SStefano Zampini 
2221637a0070SStefano Zampini    Input Parameters:
2222637a0070SStefano Zampini +  A - the matrix
2223637a0070SStefano Zampini -  array - the GPU array in column major order
2224637a0070SStefano Zampini 
2225637a0070SStefano Zampini    Notes:
2226637a0070SStefano Zampini 
2227637a0070SStefano Zampini    Level: developer
2228637a0070SStefano Zampini 
2229637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead(), MatDenseCUDAGetArrayRead()
2230637a0070SStefano Zampini @*/
2231637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArray(Mat A, PetscScalar **a)
2232637a0070SStefano Zampini {
2233637a0070SStefano Zampini   PetscErrorCode ierr;
2234637a0070SStefano Zampini 
2235637a0070SStefano Zampini   PetscFunctionBegin;
2236d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2237637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDARestoreArray_C",(Mat,PetscScalar**),(A,a));CHKERRQ(ierr);
2238637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr);
2239637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2240637a0070SStefano Zampini   PetscFunctionReturn(0);
2241637a0070SStefano Zampini }
2242637a0070SStefano Zampini #endif
2243637a0070SStefano Zampini 
2244637a0070SStefano Zampini /*@C
2245637a0070SStefano Zampini    MatCreateDense - Creates a matrix in dense format.
22468965ea79SLois Curfman McInnes 
2247d083f849SBarry Smith    Collective
2248db81eaa0SLois Curfman McInnes 
22498965ea79SLois Curfman McInnes    Input Parameters:
2250db81eaa0SLois Curfman McInnes +  comm - MPI communicator
22518965ea79SLois Curfman McInnes .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2252db81eaa0SLois Curfman McInnes .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
22538965ea79SLois Curfman McInnes .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2254db81eaa0SLois Curfman McInnes .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
22556cfe35ddSJose E. Roman -  data - optional location of matrix data.  Set data=NULL (PETSC_NULL_SCALAR for Fortran users) for PETSc
2256dfc5480cSLois Curfman McInnes    to control all matrix memory allocation.
22578965ea79SLois Curfman McInnes 
22588965ea79SLois Curfman McInnes    Output Parameter:
2259477f1c0bSLois Curfman McInnes .  A - the matrix
22608965ea79SLois Curfman McInnes 
2261b259b22eSLois Curfman McInnes    Notes:
226239ddd567SLois Curfman McInnes    The dense format is fully compatible with standard Fortran 77
226339ddd567SLois Curfman McInnes    storage by columns.
22648965ea79SLois Curfman McInnes 
226518f449edSLois Curfman McInnes    The data input variable is intended primarily for Fortran programmers
226618f449edSLois Curfman McInnes    who wish to allocate their own matrix memory space.  Most users should
22676cfe35ddSJose E. Roman    set data=NULL (PETSC_NULL_SCALAR for Fortran users).
226818f449edSLois Curfman McInnes 
22698965ea79SLois Curfman McInnes    The user MUST specify either the local or global matrix dimensions
22708965ea79SLois Curfman McInnes    (possibly both).
22718965ea79SLois Curfman McInnes 
2272027ccd11SLois Curfman McInnes    Level: intermediate
2273027ccd11SLois Curfman McInnes 
227439ddd567SLois Curfman McInnes .seealso: MatCreate(), MatCreateSeqDense(), MatSetValues()
22758965ea79SLois Curfman McInnes @*/
227669b1f4b7SBarry Smith PetscErrorCode  MatCreateDense(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
22778965ea79SLois Curfman McInnes {
22786849ba73SBarry Smith   PetscErrorCode ierr;
227913f74950SBarry Smith   PetscMPIInt    size;
22808965ea79SLois Curfman McInnes 
22813a40ed3dSBarry Smith   PetscFunctionBegin;
2282f69a0ea3SMatthew Knepley   ierr = MatCreate(comm,A);CHKERRQ(ierr);
22838491ab44SLisandro Dalcin   PetscValidLogicalCollectiveBool(*A,!!data,6);
2284f69a0ea3SMatthew Knepley   ierr = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr);
2285273d9f13SBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
2286273d9f13SBarry Smith   if (size > 1) {
2287273d9f13SBarry Smith     ierr = MatSetType(*A,MATMPIDENSE);CHKERRQ(ierr);
2288273d9f13SBarry Smith     ierr = MatMPIDenseSetPreallocation(*A,data);CHKERRQ(ierr);
22896cfe35ddSJose E. Roman     if (data) {  /* user provided data array, so no need to assemble */
22906cfe35ddSJose E. Roman       ierr = MatSetUpMultiply_MPIDense(*A);CHKERRQ(ierr);
22916cfe35ddSJose E. Roman       (*A)->assembled = PETSC_TRUE;
22926cfe35ddSJose E. Roman     }
2293273d9f13SBarry Smith   } else {
2294273d9f13SBarry Smith     ierr = MatSetType(*A,MATSEQDENSE);CHKERRQ(ierr);
2295273d9f13SBarry Smith     ierr = MatSeqDenseSetPreallocation(*A,data);CHKERRQ(ierr);
22968c469469SLois Curfman McInnes   }
22973a40ed3dSBarry Smith   PetscFunctionReturn(0);
22988965ea79SLois Curfman McInnes }
22998965ea79SLois Curfman McInnes 
2300637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2301637a0070SStefano Zampini /*@C
2302637a0070SStefano Zampini    MatCreateDenseCUDA - Creates a matrix in dense format using CUDA.
2303637a0070SStefano Zampini 
2304637a0070SStefano Zampini    Collective
2305637a0070SStefano Zampini 
2306637a0070SStefano Zampini    Input Parameters:
2307637a0070SStefano Zampini +  comm - MPI communicator
2308637a0070SStefano Zampini .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2309637a0070SStefano Zampini .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
2310637a0070SStefano Zampini .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2311637a0070SStefano Zampini .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
2312637a0070SStefano Zampini -  data - optional location of GPU matrix data.  Set data=NULL for PETSc
2313637a0070SStefano Zampini    to control matrix memory allocation.
2314637a0070SStefano Zampini 
2315637a0070SStefano Zampini    Output Parameter:
2316637a0070SStefano Zampini .  A - the matrix
2317637a0070SStefano Zampini 
2318637a0070SStefano Zampini    Notes:
2319637a0070SStefano Zampini 
2320637a0070SStefano Zampini    Level: intermediate
2321637a0070SStefano Zampini 
2322637a0070SStefano Zampini .seealso: MatCreate(), MatCreateDense()
2323637a0070SStefano Zampini @*/
2324637a0070SStefano Zampini PetscErrorCode  MatCreateDenseCUDA(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
2325637a0070SStefano Zampini {
2326637a0070SStefano Zampini   PetscErrorCode ierr;
2327637a0070SStefano Zampini   PetscMPIInt    size;
2328637a0070SStefano Zampini 
2329637a0070SStefano Zampini   PetscFunctionBegin;
2330637a0070SStefano Zampini   ierr = MatCreate(comm,A);CHKERRQ(ierr);
2331637a0070SStefano Zampini   PetscValidLogicalCollectiveBool(*A,!!data,6);
2332637a0070SStefano Zampini   ierr = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr);
2333637a0070SStefano Zampini   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
2334637a0070SStefano Zampini   if (size > 1) {
2335637a0070SStefano Zampini     ierr = MatSetType(*A,MATMPIDENSECUDA);CHKERRQ(ierr);
2336637a0070SStefano Zampini     ierr = MatMPIDenseCUDASetPreallocation(*A,data);CHKERRQ(ierr);
2337637a0070SStefano Zampini     if (data) {  /* user provided data array, so no need to assemble */
2338637a0070SStefano Zampini       ierr = MatSetUpMultiply_MPIDense(*A);CHKERRQ(ierr);
2339637a0070SStefano Zampini       (*A)->assembled = PETSC_TRUE;
2340637a0070SStefano Zampini     }
2341637a0070SStefano Zampini   } else {
2342637a0070SStefano Zampini     ierr = MatSetType(*A,MATSEQDENSECUDA);CHKERRQ(ierr);
2343637a0070SStefano Zampini     ierr = MatSeqDenseCUDASetPreallocation(*A,data);CHKERRQ(ierr);
2344637a0070SStefano Zampini   }
2345637a0070SStefano Zampini   PetscFunctionReturn(0);
2346637a0070SStefano Zampini }
2347637a0070SStefano Zampini #endif
2348637a0070SStefano Zampini 
23496849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat A,MatDuplicateOption cpvalues,Mat *newmat)
23508965ea79SLois Curfman McInnes {
23518965ea79SLois Curfman McInnes   Mat            mat;
23523501a2bdSLois Curfman McInnes   Mat_MPIDense   *a,*oldmat = (Mat_MPIDense*)A->data;
2353dfbe8321SBarry Smith   PetscErrorCode ierr;
23548965ea79SLois Curfman McInnes 
23553a40ed3dSBarry Smith   PetscFunctionBegin;
23568965ea79SLois Curfman McInnes   *newmat = 0;
2357ce94432eSBarry Smith   ierr    = MatCreate(PetscObjectComm((PetscObject)A),&mat);CHKERRQ(ierr);
2358d0f46423SBarry Smith   ierr    = MatSetSizes(mat,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
23597adad957SLisandro Dalcin   ierr    = MatSetType(mat,((PetscObject)A)->type_name);CHKERRQ(ierr);
2360834f8fabSBarry Smith   a       = (Mat_MPIDense*)mat->data;
23615aa7edbeSHong Zhang 
2362d5f3da31SBarry Smith   mat->factortype   = A->factortype;
2363c456f294SBarry Smith   mat->assembled    = PETSC_TRUE;
2364273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
23658965ea79SLois Curfman McInnes 
23668965ea79SLois Curfman McInnes   a->size         = oldmat->size;
23678965ea79SLois Curfman McInnes   a->rank         = oldmat->rank;
2368e0fa3b82SLois Curfman McInnes   mat->insertmode = NOT_SET_VALUES;
23693782ba37SSatish Balay   a->donotstash   = oldmat->donotstash;
2370e04c1aa4SHong Zhang 
23711e1e43feSBarry Smith   ierr = PetscLayoutReference(A->rmap,&mat->rmap);CHKERRQ(ierr);
23721e1e43feSBarry Smith   ierr = PetscLayoutReference(A->cmap,&mat->cmap);CHKERRQ(ierr);
23738965ea79SLois Curfman McInnes 
23745609ef8eSBarry Smith   ierr = MatDuplicate(oldmat->A,cpvalues,&a->A);CHKERRQ(ierr);
23753bb1ff40SBarry Smith   ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A);CHKERRQ(ierr);
2376637a0070SStefano Zampini   ierr = MatSetUpMultiply_MPIDense(mat);CHKERRQ(ierr);
237701b82886SBarry Smith 
23788965ea79SLois Curfman McInnes   *newmat = mat;
23793a40ed3dSBarry Smith   PetscFunctionReturn(0);
23808965ea79SLois Curfman McInnes }
23818965ea79SLois Curfman McInnes 
2382eb91f321SVaclav Hapla PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer)
2383eb91f321SVaclav Hapla {
2384eb91f321SVaclav Hapla   PetscErrorCode ierr;
238587d5ce66SSatish Balay   PetscBool      isbinary;
238687d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
238787d5ce66SSatish Balay   PetscBool      ishdf5;
238887d5ce66SSatish Balay #endif
2389eb91f321SVaclav Hapla 
2390eb91f321SVaclav Hapla   PetscFunctionBegin;
2391eb91f321SVaclav Hapla   PetscValidHeaderSpecific(newMat,MAT_CLASSID,1);
2392eb91f321SVaclav Hapla   PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2);
2393eb91f321SVaclav Hapla   /* force binary viewer to load .info file if it has not yet done so */
2394eb91f321SVaclav Hapla   ierr = PetscViewerSetUp(viewer);CHKERRQ(ierr);
2395eb91f321SVaclav Hapla   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr);
239687d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
2397eb91f321SVaclav Hapla   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERHDF5,  &ishdf5);CHKERRQ(ierr);
239887d5ce66SSatish Balay #endif
2399eb91f321SVaclav Hapla   if (isbinary) {
24008491ab44SLisandro Dalcin     ierr = MatLoad_Dense_Binary(newMat,viewer);CHKERRQ(ierr);
2401eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5)
240287d5ce66SSatish Balay   } else if (ishdf5) {
2403eb91f321SVaclav Hapla     ierr = MatLoad_Dense_HDF5(newMat,viewer);CHKERRQ(ierr);
2404eb91f321SVaclav Hapla #endif
240587d5ce66SSatish Balay   } else SETERRQ2(PetscObjectComm((PetscObject)newMat),PETSC_ERR_SUP,"Viewer type %s not yet supported for reading %s matrices",((PetscObject)viewer)->type_name,((PetscObject)newMat)->type_name);
2406eb91f321SVaclav Hapla   PetscFunctionReturn(0);
2407eb91f321SVaclav Hapla }
2408eb91f321SVaclav Hapla 
2409*6718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat A,Mat B,PetscBool  *flag)
24106e4ee0c6SHong Zhang {
24116e4ee0c6SHong Zhang   Mat_MPIDense   *matB = (Mat_MPIDense*)B->data,*matA = (Mat_MPIDense*)A->data;
24126e4ee0c6SHong Zhang   Mat            a,b;
2413ace3abfcSBarry Smith   PetscBool      flg;
24146e4ee0c6SHong Zhang   PetscErrorCode ierr;
241590ace30eSBarry Smith 
24166e4ee0c6SHong Zhang   PetscFunctionBegin;
24176e4ee0c6SHong Zhang   a    = matA->A;
24186e4ee0c6SHong Zhang   b    = matB->A;
24196e4ee0c6SHong Zhang   ierr = MatEqual(a,b,&flg);CHKERRQ(ierr);
2420b2566f29SBarry Smith   ierr = MPIU_Allreduce(&flg,flag,1,MPIU_BOOL,MPI_LAND,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
24216e4ee0c6SHong Zhang   PetscFunctionReturn(0);
24226e4ee0c6SHong Zhang }
242390ace30eSBarry Smith 
2424*6718818eSStefano Zampini PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data)
2425baa3c1c6SHong Zhang {
2426baa3c1c6SHong Zhang   PetscErrorCode        ierr;
2427*6718818eSStefano Zampini   Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data;
2428baa3c1c6SHong Zhang 
2429baa3c1c6SHong Zhang   PetscFunctionBegin;
2430637a0070SStefano Zampini   ierr = PetscFree2(atb->sendbuf,atb->recvcounts);CHKERRQ(ierr);
2431637a0070SStefano Zampini   ierr = MatDestroy(&atb->atb);CHKERRQ(ierr);
2432baa3c1c6SHong Zhang   ierr = PetscFree(atb);CHKERRQ(ierr);
2433baa3c1c6SHong Zhang   PetscFunctionReturn(0);
2434baa3c1c6SHong Zhang }
2435baa3c1c6SHong Zhang 
2436*6718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data)
2437cc48ffa7SToby Isaac {
2438cc48ffa7SToby Isaac   PetscErrorCode        ierr;
2439*6718818eSStefano Zampini   Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data;
2440cc48ffa7SToby Isaac 
2441cc48ffa7SToby Isaac   PetscFunctionBegin;
2442cc48ffa7SToby Isaac   ierr = PetscFree2(abt->buf[0],abt->buf[1]);CHKERRQ(ierr);
2443faa55883SToby Isaac   ierr = PetscFree2(abt->recvcounts,abt->recvdispls);CHKERRQ(ierr);
2444cc48ffa7SToby Isaac   ierr = PetscFree(abt);CHKERRQ(ierr);
2445cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2446cc48ffa7SToby Isaac }
2447cc48ffa7SToby Isaac 
2448*6718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2449cb20be35SHong Zhang {
2450baa3c1c6SHong Zhang   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
2451*6718818eSStefano Zampini   Mat_TransMatMultDense *atb;
2452cb20be35SHong Zhang   PetscErrorCode        ierr;
2453cb20be35SHong Zhang   MPI_Comm              comm;
2454*6718818eSStefano Zampini   PetscMPIInt           size,*recvcounts;
2455*6718818eSStefano Zampini   PetscScalar           *carray,*sendbuf;
2456637a0070SStefano Zampini   const PetscScalar     *atbarray;
2457d5017740SHong Zhang   PetscInt              i,cN=C->cmap->N,cM=C->rmap->N,proc,k,j;
2458e68c0b26SHong Zhang   const PetscInt        *ranges;
2459cb20be35SHong Zhang 
2460cb20be35SHong Zhang   PetscFunctionBegin;
2461*6718818eSStefano Zampini   MatCheckProduct(C,3);
2462*6718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
2463*6718818eSStefano Zampini   atb = (Mat_TransMatMultDense *)C->product->data;
2464*6718818eSStefano Zampini   recvcounts = atb->recvcounts;
2465*6718818eSStefano Zampini   sendbuf = atb->sendbuf;
2466*6718818eSStefano Zampini 
2467cb20be35SHong Zhang   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
2468cb20be35SHong Zhang   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
2469e68c0b26SHong Zhang 
2470c5ef1628SHong Zhang   /* compute atbarray = aseq^T * bseq */
2471637a0070SStefano Zampini   ierr = MatTransposeMatMult(a->A,b->A,atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX,PETSC_DEFAULT,&atb->atb);CHKERRQ(ierr);
2472cb20be35SHong Zhang 
2473cb20be35SHong Zhang   ierr = MatGetOwnershipRanges(C,&ranges);CHKERRQ(ierr);
2474c5ef1628SHong Zhang   for (i=0; i<size; i++) recvcounts[i] = (ranges[i+1] - ranges[i])*cN;
2475cb20be35SHong Zhang 
2476660d5466SHong Zhang   /* arrange atbarray into sendbuf */
2477637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(atb->atb,&atbarray);CHKERRQ(ierr);
2478637a0070SStefano Zampini   for (proc=0, k=0; proc<size; proc++) {
2479baa3c1c6SHong Zhang     for (j=0; j<cN; j++) {
2480c5ef1628SHong Zhang       for (i=ranges[proc]; i<ranges[proc+1]; i++) sendbuf[k++] = atbarray[i+j*cM];
2481cb20be35SHong Zhang     }
2482cb20be35SHong Zhang   }
2483637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(atb->atb,&atbarray);CHKERRQ(ierr);
2484637a0070SStefano Zampini 
2485c5ef1628SHong Zhang   /* sum all atbarray to local values of C */
2486660d5466SHong Zhang   ierr = MatDenseGetArray(c->A,&carray);CHKERRQ(ierr);
24873462b7efSHong Zhang   ierr = MPI_Reduce_scatter(sendbuf,carray,recvcounts,MPIU_SCALAR,MPIU_SUM,comm);CHKERRQ(ierr);
2488660d5466SHong Zhang   ierr = MatDenseRestoreArray(c->A,&carray);CHKERRQ(ierr);
2489cb20be35SHong Zhang   PetscFunctionReturn(0);
2490cb20be35SHong Zhang }
2491cb20be35SHong Zhang 
2492*6718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2493cb20be35SHong Zhang {
2494cb20be35SHong Zhang   PetscErrorCode        ierr;
2495cb20be35SHong Zhang   MPI_Comm              comm;
2496baa3c1c6SHong Zhang   PetscMPIInt           size;
2497660d5466SHong Zhang   PetscInt              cm=A->cmap->n,cM,cN=B->cmap->N;
2498baa3c1c6SHong Zhang   Mat_TransMatMultDense *atb;
2499*6718818eSStefano Zampini   PetscBool             cisdense;
2500cb20be35SHong Zhang 
2501cb20be35SHong Zhang   PetscFunctionBegin;
2502*6718818eSStefano Zampini   MatCheckProduct(C,3);
2503*6718818eSStefano Zampini   if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
2504baa3c1c6SHong Zhang   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
2505cb20be35SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) {
2506cb20be35SHong Zhang     SETERRQ4(comm,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%D, %D) != B (%D,%D)",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2507cb20be35SHong Zhang   }
2508cb20be35SHong Zhang 
25094222ddf1SHong Zhang   /* create matrix product C */
2510*6718818eSStefano Zampini   ierr = MatSetSizes(C,cm,B->cmap->n,A->cmap->N,B->cmap->N);CHKERRQ(ierr);
2511*6718818eSStefano Zampini   ierr = PetscObjectTypeCompareAny((PetscObject)C,&cisdense,MATMPIDENSE,MATMPIDENSECUDA,"");CHKERRQ(ierr);
2512*6718818eSStefano Zampini   if (!cisdense) {
2513*6718818eSStefano Zampini     ierr = MatSetType(C,((PetscObject)A)->type_name);CHKERRQ(ierr);
2514*6718818eSStefano Zampini   }
251518992e5dSStefano Zampini   ierr = MatSetUp(C);CHKERRQ(ierr);
25164222ddf1SHong Zhang   ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
25174222ddf1SHong Zhang   ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2518baa3c1c6SHong Zhang 
25194222ddf1SHong Zhang   /* create data structure for reuse C */
2520baa3c1c6SHong Zhang   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
2521baa3c1c6SHong Zhang   ierr = PetscNew(&atb);CHKERRQ(ierr);
25224222ddf1SHong Zhang   cM   = C->rmap->N;
2523*6718818eSStefano Zampini   ierr = PetscMalloc2((size_t)cM*(size_t)cN,&atb->sendbuf,size,&atb->recvcounts);CHKERRQ(ierr);
2524baa3c1c6SHong Zhang 
2525*6718818eSStefano Zampini   C->product->data    = atb;
2526*6718818eSStefano Zampini   C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense;
2527cb20be35SHong Zhang   PetscFunctionReturn(0);
2528cb20be35SHong Zhang }
2529cb20be35SHong Zhang 
25304222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C)
2531cb20be35SHong Zhang {
2532cb20be35SHong Zhang   PetscErrorCode        ierr;
2533cc48ffa7SToby Isaac   MPI_Comm              comm;
2534cc48ffa7SToby Isaac   PetscMPIInt           i, size;
2535cc48ffa7SToby Isaac   PetscInt              maxRows, bufsiz;
2536cc48ffa7SToby Isaac   PetscMPIInt           tag;
25374222ddf1SHong Zhang   PetscInt              alg;
2538cc48ffa7SToby Isaac   Mat_MatTransMultDense *abt;
25394222ddf1SHong Zhang   Mat_Product           *product = C->product;
25404222ddf1SHong Zhang   PetscBool             flg;
2541cc48ffa7SToby Isaac 
2542cc48ffa7SToby Isaac   PetscFunctionBegin;
2543*6718818eSStefano Zampini   MatCheckProduct(C,4);
2544*6718818eSStefano Zampini   if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
25454222ddf1SHong Zhang   /* check local size of A and B */
2546637a0070SStefano Zampini   if (A->cmap->n != B->cmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local column dimensions are incompatible, A (%D) != B (%D)",A->cmap->n,B->cmap->n);
2547cc48ffa7SToby Isaac 
25484222ddf1SHong Zhang   ierr = PetscStrcmp(product->alg,"allgatherv",&flg);CHKERRQ(ierr);
2549637a0070SStefano Zampini   alg  = flg ? 0 : 1;
2550cc48ffa7SToby Isaac 
25514222ddf1SHong Zhang   /* setup matrix product C */
25524222ddf1SHong Zhang   ierr = MatSetSizes(C,A->rmap->n,B->rmap->n,A->rmap->N,B->rmap->N);CHKERRQ(ierr);
25534222ddf1SHong Zhang   ierr = MatSetType(C,MATMPIDENSE);CHKERRQ(ierr);
255418992e5dSStefano Zampini   ierr = MatSetUp(C);CHKERRQ(ierr);
25554222ddf1SHong Zhang   ierr = PetscObjectGetNewTag((PetscObject)C,&tag);CHKERRQ(ierr);
25564222ddf1SHong Zhang   ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
25574222ddf1SHong Zhang   ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
25584222ddf1SHong Zhang 
25594222ddf1SHong Zhang   /* create data structure for reuse C */
25604222ddf1SHong Zhang   ierr = PetscObjectGetComm((PetscObject)C,&comm);CHKERRQ(ierr);
2561cc48ffa7SToby Isaac   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
2562cc48ffa7SToby Isaac   ierr = PetscNew(&abt);CHKERRQ(ierr);
2563cc48ffa7SToby Isaac   abt->tag = tag;
2564faa55883SToby Isaac   abt->alg = alg;
2565faa55883SToby Isaac   switch (alg) {
25664222ddf1SHong Zhang   case 1: /* alg: "cyclic" */
2567cc48ffa7SToby Isaac     for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i]));
2568cc48ffa7SToby Isaac     bufsiz = A->cmap->N * maxRows;
2569cc48ffa7SToby Isaac     ierr = PetscMalloc2(bufsiz,&(abt->buf[0]),bufsiz,&(abt->buf[1]));CHKERRQ(ierr);
2570faa55883SToby Isaac     break;
25714222ddf1SHong Zhang   default: /* alg: "allgatherv" */
2572faa55883SToby Isaac     ierr = PetscMalloc2(B->rmap->n * B->cmap->N, &(abt->buf[0]), B->rmap->N * B->cmap->N, &(abt->buf[1]));CHKERRQ(ierr);
2573faa55883SToby Isaac     ierr = PetscMalloc2(size,&(abt->recvcounts),size+1,&(abt->recvdispls));CHKERRQ(ierr);
2574faa55883SToby Isaac     for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N;
2575faa55883SToby Isaac     for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i];
2576faa55883SToby Isaac     break;
2577faa55883SToby Isaac   }
2578cc48ffa7SToby Isaac 
2579*6718818eSStefano Zampini   C->product->data    = abt;
2580*6718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense;
25814222ddf1SHong Zhang   C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense;
2582cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2583cc48ffa7SToby Isaac }
2584cc48ffa7SToby Isaac 
2585faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C)
2586cc48ffa7SToby Isaac {
2587cc48ffa7SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
2588*6718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2589cc48ffa7SToby Isaac   PetscErrorCode        ierr;
2590cc48ffa7SToby Isaac   MPI_Comm              comm;
2591cc48ffa7SToby Isaac   PetscMPIInt           rank,size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom;
2592637a0070SStefano Zampini   PetscScalar           *sendbuf, *recvbuf=0, *cv;
2593cc48ffa7SToby Isaac   PetscInt              i,cK=A->cmap->N,k,j,bn;
2594cc48ffa7SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2595637a0070SStefano Zampini   const PetscScalar     *av,*bv;
2596637a0070SStefano Zampini   PetscBLASInt          cm, cn, ck, alda, blda, clda;
2597cc48ffa7SToby Isaac   MPI_Request           reqs[2];
2598cc48ffa7SToby Isaac   const PetscInt        *ranges;
2599cc48ffa7SToby Isaac 
2600cc48ffa7SToby Isaac   PetscFunctionBegin;
2601*6718818eSStefano Zampini   MatCheckProduct(C,3);
2602*6718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
2603*6718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
2604*6718818eSStefano Zampini   ierr = PetscObjectGetComm((PetscObject)C,&comm);CHKERRQ(ierr);
2605cc48ffa7SToby Isaac   ierr = MPI_Comm_rank(comm,&rank);CHKERRQ(ierr);
2606cc48ffa7SToby Isaac   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
2607637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(a->A,&av);CHKERRQ(ierr);
2608637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(b->A,&bv);CHKERRQ(ierr);
2609637a0070SStefano Zampini   ierr = MatDenseGetArray(c->A,&cv);CHKERRQ(ierr);
2610637a0070SStefano Zampini   ierr = MatDenseGetLDA(a->A,&i);CHKERRQ(ierr);
2611637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&alda);CHKERRQ(ierr);
2612637a0070SStefano Zampini   ierr = MatDenseGetLDA(b->A,&i);CHKERRQ(ierr);
2613637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&blda);CHKERRQ(ierr);
2614637a0070SStefano Zampini   ierr = MatDenseGetLDA(c->A,&i);CHKERRQ(ierr);
2615637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&clda);CHKERRQ(ierr);
2616cc48ffa7SToby Isaac   ierr = MatGetOwnershipRanges(B,&ranges);CHKERRQ(ierr);
2617cc48ffa7SToby Isaac   bn   = B->rmap->n;
2618637a0070SStefano Zampini   if (blda == bn) {
2619637a0070SStefano Zampini     sendbuf = (PetscScalar*)bv;
2620cc48ffa7SToby Isaac   } else {
2621cc48ffa7SToby Isaac     sendbuf = abt->buf[0];
2622cc48ffa7SToby Isaac     for (k = 0, i = 0; i < cK; i++) {
2623cc48ffa7SToby Isaac       for (j = 0; j < bn; j++, k++) {
2624637a0070SStefano Zampini         sendbuf[k] = bv[i * blda + j];
2625cc48ffa7SToby Isaac       }
2626cc48ffa7SToby Isaac     }
2627cc48ffa7SToby Isaac   }
2628cc48ffa7SToby Isaac   if (size > 1) {
2629cc48ffa7SToby Isaac     sendto = (rank + size - 1) % size;
2630cc48ffa7SToby Isaac     recvfrom = (rank + size + 1) % size;
2631cc48ffa7SToby Isaac   } else {
2632cc48ffa7SToby Isaac     sendto = recvfrom = 0;
2633cc48ffa7SToby Isaac   }
2634cc48ffa7SToby Isaac   ierr = PetscBLASIntCast(cK,&ck);CHKERRQ(ierr);
2635cc48ffa7SToby Isaac   ierr = PetscBLASIntCast(c->A->rmap->n,&cm);CHKERRQ(ierr);
2636cc48ffa7SToby Isaac   recvisfrom = rank;
2637cc48ffa7SToby Isaac   for (i = 0; i < size; i++) {
2638cc48ffa7SToby Isaac     /* we have finished receiving in sending, bufs can be read/modified */
2639cc48ffa7SToby Isaac     PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */
2640cc48ffa7SToby Isaac     PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom];
2641cc48ffa7SToby Isaac 
2642cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2643cc48ffa7SToby Isaac       /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */
2644cc48ffa7SToby Isaac       sendsiz = cK * bn;
2645cc48ffa7SToby Isaac       recvsiz = cK * nextbn;
2646cc48ffa7SToby Isaac       recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1];
2647cc48ffa7SToby Isaac       ierr = MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0]);CHKERRQ(ierr);
2648cc48ffa7SToby Isaac       ierr = MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1]);CHKERRQ(ierr);
2649cc48ffa7SToby Isaac     }
2650cc48ffa7SToby Isaac 
2651cc48ffa7SToby Isaac     /* local aseq * sendbuf^T */
2652cc48ffa7SToby Isaac     ierr = PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn);CHKERRQ(ierr);
265350ce3c9cSStefano Zampini     if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","T",&cm,&cn,&ck,&_DOne,av,&alda,sendbuf,&cn,&_DZero,cv + clda * ranges[recvisfrom],&clda));
2654cc48ffa7SToby Isaac 
2655cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2656cc48ffa7SToby Isaac       /* wait for the sends and receives to complete, swap sendbuf and recvbuf */
2657cc48ffa7SToby Isaac       ierr = MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE);CHKERRQ(ierr);
2658cc48ffa7SToby Isaac     }
2659cc48ffa7SToby Isaac     bn = nextbn;
2660cc48ffa7SToby Isaac     recvisfrom = nextrecvisfrom;
2661cc48ffa7SToby Isaac     sendbuf = recvbuf;
2662cc48ffa7SToby Isaac   }
2663637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,&av);CHKERRQ(ierr);
2664637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(b->A,&bv);CHKERRQ(ierr);
2665637a0070SStefano Zampini   ierr = MatDenseRestoreArray(c->A,&cv);CHKERRQ(ierr);
2666cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2667cc48ffa7SToby Isaac }
2668cc48ffa7SToby Isaac 
2669faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C)
2670faa55883SToby Isaac {
2671faa55883SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
2672*6718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2673faa55883SToby Isaac   PetscErrorCode        ierr;
2674faa55883SToby Isaac   MPI_Comm              comm;
2675637a0070SStefano Zampini   PetscMPIInt           size;
2676637a0070SStefano Zampini   PetscScalar           *cv, *sendbuf, *recvbuf;
2677637a0070SStefano Zampini   const PetscScalar     *av,*bv;
2678637a0070SStefano Zampini   PetscInt              blda,i,cK=A->cmap->N,k,j,bn;
2679faa55883SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2680637a0070SStefano Zampini   PetscBLASInt          cm, cn, ck, alda, clda;
2681faa55883SToby Isaac 
2682faa55883SToby Isaac   PetscFunctionBegin;
2683*6718818eSStefano Zampini   MatCheckProduct(C,3);
2684*6718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
2685*6718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
2686faa55883SToby Isaac   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
2687faa55883SToby Isaac   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
2688637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(a->A,&av);CHKERRQ(ierr);
2689637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(b->A,&bv);CHKERRQ(ierr);
2690637a0070SStefano Zampini   ierr = MatDenseGetArray(c->A,&cv);CHKERRQ(ierr);
2691637a0070SStefano Zampini   ierr = MatDenseGetLDA(a->A,&i);CHKERRQ(ierr);
2692637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&alda);CHKERRQ(ierr);
2693637a0070SStefano Zampini   ierr = MatDenseGetLDA(b->A,&blda);CHKERRQ(ierr);
2694637a0070SStefano Zampini   ierr = MatDenseGetLDA(c->A,&i);CHKERRQ(ierr);
2695637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&clda);CHKERRQ(ierr);
2696faa55883SToby Isaac   /* copy transpose of B into buf[0] */
2697faa55883SToby Isaac   bn      = B->rmap->n;
2698faa55883SToby Isaac   sendbuf = abt->buf[0];
2699faa55883SToby Isaac   recvbuf = abt->buf[1];
2700faa55883SToby Isaac   for (k = 0, j = 0; j < bn; j++) {
2701faa55883SToby Isaac     for (i = 0; i < cK; i++, k++) {
2702637a0070SStefano Zampini       sendbuf[k] = bv[i * blda + j];
2703faa55883SToby Isaac     }
2704faa55883SToby Isaac   }
2705637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(b->A,&bv);CHKERRQ(ierr);
2706faa55883SToby Isaac   ierr = MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm);CHKERRQ(ierr);
2707faa55883SToby Isaac   ierr = PetscBLASIntCast(cK,&ck);CHKERRQ(ierr);
2708faa55883SToby Isaac   ierr = PetscBLASIntCast(c->A->rmap->n,&cm);CHKERRQ(ierr);
2709faa55883SToby Isaac   ierr = PetscBLASIntCast(c->A->cmap->n,&cn);CHKERRQ(ierr);
271050ce3c9cSStefano Zampini   if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","N",&cm,&cn,&ck,&_DOne,av,&alda,recvbuf,&ck,&_DZero,cv,&clda));
2711637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,&av);CHKERRQ(ierr);
2712637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(b->A,&bv);CHKERRQ(ierr);
2713637a0070SStefano Zampini   ierr = MatDenseRestoreArray(c->A,&cv);CHKERRQ(ierr);
2714faa55883SToby Isaac   PetscFunctionReturn(0);
2715faa55883SToby Isaac }
2716faa55883SToby Isaac 
2717faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C)
2718faa55883SToby Isaac {
2719*6718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2720faa55883SToby Isaac   PetscErrorCode        ierr;
2721faa55883SToby Isaac 
2722faa55883SToby Isaac   PetscFunctionBegin;
2723*6718818eSStefano Zampini   MatCheckProduct(C,3);
2724*6718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
2725*6718818eSStefano Zampini   abt = (Mat_MatTransMultDense*)C->product->data;
2726faa55883SToby Isaac   switch (abt->alg) {
2727faa55883SToby Isaac   case 1:
2728faa55883SToby Isaac     ierr = MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C);CHKERRQ(ierr);
2729faa55883SToby Isaac     break;
2730faa55883SToby Isaac   default:
2731faa55883SToby Isaac     ierr = MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C);CHKERRQ(ierr);
2732faa55883SToby Isaac     break;
2733faa55883SToby Isaac   }
2734faa55883SToby Isaac   PetscFunctionReturn(0);
2735faa55883SToby Isaac }
2736faa55883SToby Isaac 
2737*6718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data)
2738320f2790SHong Zhang {
2739320f2790SHong Zhang   PetscErrorCode   ierr;
2740*6718818eSStefano Zampini   Mat_MatMultDense *ab = (Mat_MatMultDense*)data;
2741320f2790SHong Zhang 
2742320f2790SHong Zhang   PetscFunctionBegin;
2743320f2790SHong Zhang   ierr = MatDestroy(&ab->Ce);CHKERRQ(ierr);
2744320f2790SHong Zhang   ierr = MatDestroy(&ab->Ae);CHKERRQ(ierr);
2745320f2790SHong Zhang   ierr = MatDestroy(&ab->Be);CHKERRQ(ierr);
2746320f2790SHong Zhang   ierr = PetscFree(ab);CHKERRQ(ierr);
2747320f2790SHong Zhang   PetscFunctionReturn(0);
2748320f2790SHong Zhang }
2749320f2790SHong Zhang 
27505242a7b1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
2751320f2790SHong Zhang PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2752320f2790SHong Zhang {
2753320f2790SHong Zhang   PetscErrorCode   ierr;
2754*6718818eSStefano Zampini   Mat_MatMultDense *ab;
2755320f2790SHong Zhang 
2756320f2790SHong Zhang   PetscFunctionBegin;
2757*6718818eSStefano Zampini   MatCheckProduct(C,3);
2758*6718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing product data");
2759*6718818eSStefano Zampini   ab   = (Mat_MatMultDense*)C->product->data;
2760de0a22f0SHong Zhang   ierr = MatConvert_MPIDense_Elemental(A,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Ae);CHKERRQ(ierr);
2761de0a22f0SHong Zhang   ierr = MatConvert_MPIDense_Elemental(B,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Be);CHKERRQ(ierr);
27624222ddf1SHong Zhang   ierr = MatMatMultNumeric_Elemental(ab->Ae,ab->Be,ab->Ce);CHKERRQ(ierr);
2763de0a22f0SHong Zhang   ierr = MatConvert(ab->Ce,MATMPIDENSE,MAT_REUSE_MATRIX,&C);CHKERRQ(ierr);
2764320f2790SHong Zhang   PetscFunctionReturn(0);
2765320f2790SHong Zhang }
2766320f2790SHong Zhang 
2767*6718818eSStefano Zampini static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2768320f2790SHong Zhang {
2769320f2790SHong Zhang   PetscErrorCode   ierr;
2770320f2790SHong Zhang   Mat              Ae,Be,Ce;
2771320f2790SHong Zhang   Mat_MatMultDense *ab;
2772320f2790SHong Zhang 
2773320f2790SHong Zhang   PetscFunctionBegin;
2774*6718818eSStefano Zampini   MatCheckProduct(C,4);
2775*6718818eSStefano Zampini   if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
27764222ddf1SHong Zhang   /* check local size of A and B */
2777320f2790SHong Zhang   if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend) {
2778378336b6SHong Zhang     SETERRQ4(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%D, %D) != B (%D,%D)",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2779320f2790SHong Zhang   }
2780320f2790SHong Zhang 
27814222ddf1SHong Zhang   /* create elemental matrices Ae and Be */
27824222ddf1SHong Zhang   ierr = MatCreate(PetscObjectComm((PetscObject)A), &Ae);CHKERRQ(ierr);
27834222ddf1SHong Zhang   ierr = MatSetSizes(Ae,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
27844222ddf1SHong Zhang   ierr = MatSetType(Ae,MATELEMENTAL);CHKERRQ(ierr);
27854222ddf1SHong Zhang   ierr = MatSetUp(Ae);CHKERRQ(ierr);
27864222ddf1SHong Zhang   ierr = MatSetOption(Ae,MAT_ROW_ORIENTED,PETSC_FALSE);CHKERRQ(ierr);
2787320f2790SHong Zhang 
27884222ddf1SHong Zhang   ierr = MatCreate(PetscObjectComm((PetscObject)B), &Be);CHKERRQ(ierr);
27894222ddf1SHong Zhang   ierr = MatSetSizes(Be,PETSC_DECIDE,PETSC_DECIDE,B->rmap->N,B->cmap->N);CHKERRQ(ierr);
27904222ddf1SHong Zhang   ierr = MatSetType(Be,MATELEMENTAL);CHKERRQ(ierr);
27914222ddf1SHong Zhang   ierr = MatSetUp(Be);CHKERRQ(ierr);
27924222ddf1SHong Zhang   ierr = MatSetOption(Be,MAT_ROW_ORIENTED,PETSC_FALSE);CHKERRQ(ierr);
2793320f2790SHong Zhang 
27944222ddf1SHong Zhang   /* compute symbolic Ce = Ae*Be */
27954222ddf1SHong Zhang   ierr = MatCreate(PetscObjectComm((PetscObject)C),&Ce);CHKERRQ(ierr);
27964222ddf1SHong Zhang   ierr = MatMatMultSymbolic_Elemental(Ae,Be,fill,Ce);CHKERRQ(ierr);
27974222ddf1SHong Zhang 
27984222ddf1SHong Zhang   /* setup C */
27994222ddf1SHong Zhang   ierr = MatSetSizes(C,A->rmap->n,B->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
28004222ddf1SHong Zhang   ierr = MatSetType(C,MATDENSE);CHKERRQ(ierr);
28014222ddf1SHong Zhang   ierr = MatSetUp(C);CHKERRQ(ierr);
2802320f2790SHong Zhang 
2803320f2790SHong Zhang   /* create data structure for reuse Cdense */
2804320f2790SHong Zhang   ierr = PetscNew(&ab);CHKERRQ(ierr);
2805320f2790SHong Zhang   ab->Ae = Ae;
2806320f2790SHong Zhang   ab->Be = Be;
2807320f2790SHong Zhang   ab->Ce = Ce;
2808*6718818eSStefano Zampini 
2809*6718818eSStefano Zampini   C->product->data    = ab;
2810*6718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense;
28114222ddf1SHong Zhang   C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense;
2812320f2790SHong Zhang   PetscFunctionReturn(0);
2813320f2790SHong Zhang }
28144222ddf1SHong Zhang #endif
28154222ddf1SHong Zhang /* ----------------------------------------------- */
28164222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
28174222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C)
2818320f2790SHong Zhang {
2819320f2790SHong Zhang   PetscFunctionBegin;
28204222ddf1SHong Zhang   C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense;
28214222ddf1SHong Zhang   C->ops->productsymbolic = MatProductSymbolic_AB;
2822320f2790SHong Zhang   PetscFunctionReturn(0);
2823320f2790SHong Zhang }
28245242a7b1SHong Zhang #endif
282586aefd0dSHong Zhang 
28264222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C)
28274222ddf1SHong Zhang {
28284222ddf1SHong Zhang   Mat_Product *product = C->product;
28294222ddf1SHong Zhang   Mat         A = product->A,B=product->B;
28304222ddf1SHong Zhang 
28314222ddf1SHong Zhang   PetscFunctionBegin;
28324222ddf1SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend)
28334222ddf1SHong Zhang     SETERRQ4(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%D, %D) != (%D,%D)",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2834*6718818eSStefano Zampini   C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense;
2835*6718818eSStefano Zampini   C->ops->productsymbolic = MatProductSymbolic_AtB;
28364222ddf1SHong Zhang   PetscFunctionReturn(0);
28374222ddf1SHong Zhang }
28384222ddf1SHong Zhang 
28394222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C)
28404222ddf1SHong Zhang {
28414222ddf1SHong Zhang   PetscErrorCode ierr;
28424222ddf1SHong Zhang   Mat_Product    *product = C->product;
28434222ddf1SHong Zhang   const char     *algTypes[2] = {"allgatherv","cyclic"};
28444222ddf1SHong Zhang   PetscInt       alg,nalg = 2;
28454222ddf1SHong Zhang   PetscBool      flg = PETSC_FALSE;
28464222ddf1SHong Zhang 
28474222ddf1SHong Zhang   PetscFunctionBegin;
28484222ddf1SHong Zhang   /* Set default algorithm */
28494222ddf1SHong Zhang   alg = 0; /* default is allgatherv */
28504222ddf1SHong Zhang   ierr = PetscStrcmp(product->alg,"default",&flg);CHKERRQ(ierr);
28514222ddf1SHong Zhang   if (flg) {
28524222ddf1SHong Zhang     ierr = MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]);CHKERRQ(ierr);
28534222ddf1SHong Zhang   }
28544222ddf1SHong Zhang 
28554222ddf1SHong Zhang   /* Get runtime option */
28564222ddf1SHong Zhang   if (product->api_user) {
28574222ddf1SHong Zhang     ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatMatTransposeMult","Mat");CHKERRQ(ierr);
28584222ddf1SHong Zhang     ierr = PetscOptionsEList("-matmattransmult_mpidense_mpidense_via","Algorithmic approach","MatMatTransposeMult",algTypes,nalg,algTypes[alg],&alg,&flg);CHKERRQ(ierr);
28594222ddf1SHong Zhang     ierr = PetscOptionsEnd();CHKERRQ(ierr);
28604222ddf1SHong Zhang   } else {
28614222ddf1SHong Zhang     ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatProduct_ABt","Mat");CHKERRQ(ierr);
28624222ddf1SHong Zhang     ierr = PetscOptionsEList("-matproduct_abt_mpidense_mpidense_via","Algorithmic approach","MatProduct_ABt",algTypes,nalg,algTypes[alg],&alg,&flg);CHKERRQ(ierr);
28634222ddf1SHong Zhang     ierr = PetscOptionsEnd();CHKERRQ(ierr);
28644222ddf1SHong Zhang   }
28654222ddf1SHong Zhang   if (flg) {
28664222ddf1SHong Zhang     ierr = MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]);CHKERRQ(ierr);
28674222ddf1SHong Zhang   }
28684222ddf1SHong Zhang 
28694222ddf1SHong Zhang   C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense;
28704222ddf1SHong Zhang   C->ops->productsymbolic          = MatProductSymbolic_ABt;
28714222ddf1SHong Zhang   PetscFunctionReturn(0);
28724222ddf1SHong Zhang }
28734222ddf1SHong Zhang 
28744222ddf1SHong Zhang PETSC_INTERN PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C)
28754222ddf1SHong Zhang {
28764222ddf1SHong Zhang   PetscErrorCode ierr;
28774222ddf1SHong Zhang   Mat_Product    *product = C->product;
28784222ddf1SHong Zhang 
28794222ddf1SHong Zhang   PetscFunctionBegin;
28804222ddf1SHong Zhang   switch (product->type) {
28814222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
28824222ddf1SHong Zhang   case MATPRODUCT_AB:
28834222ddf1SHong Zhang     ierr = MatProductSetFromOptions_MPIDense_AB(C);CHKERRQ(ierr);
28844222ddf1SHong Zhang     break;
28854222ddf1SHong Zhang #endif
28864222ddf1SHong Zhang   case MATPRODUCT_AtB:
28874222ddf1SHong Zhang     ierr = MatProductSetFromOptions_MPIDense_AtB(C);CHKERRQ(ierr);
28884222ddf1SHong Zhang     break;
28894222ddf1SHong Zhang   case MATPRODUCT_ABt:
28904222ddf1SHong Zhang     ierr = MatProductSetFromOptions_MPIDense_ABt(C);CHKERRQ(ierr);
28914222ddf1SHong Zhang     break;
2892*6718818eSStefano Zampini   default:
2893*6718818eSStefano Zampini     break;
28944222ddf1SHong Zhang   }
28954222ddf1SHong Zhang   PetscFunctionReturn(0);
28964222ddf1SHong Zhang }
2897