xref: /petsc/src/mat/impls/dense/mpi/mpidense.c (revision 6f08ad05fa8d2c524312bc0b98d11f1d86a638dc)
1be1d678aSKris Buschelman 
2ed3cc1f0SBarry Smith /*
3ed3cc1f0SBarry Smith    Basic functions for basic parallel dense matrices.
4ed3cc1f0SBarry Smith */
5ed3cc1f0SBarry Smith 
6c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h>    /*I   "petscmat.h"  I*/
78949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h>
8baa3c1c6SHong Zhang #include <petscblaslapack.h>
98965ea79SLois Curfman McInnes 
10ab92ecdeSBarry Smith /*@
11ab92ecdeSBarry Smith 
12ab92ecdeSBarry Smith       MatDenseGetLocalMatrix - For a MATMPIDENSE or MATSEQDENSE matrix returns the sequential
13ab92ecdeSBarry Smith               matrix that represents the operator. For sequential matrices it returns itself.
14ab92ecdeSBarry Smith 
15ab92ecdeSBarry Smith     Input Parameter:
16ab92ecdeSBarry Smith .      A - the Seq or MPI dense matrix
17ab92ecdeSBarry Smith 
18ab92ecdeSBarry Smith     Output Parameter:
19ab92ecdeSBarry Smith .      B - the inner matrix
20ab92ecdeSBarry Smith 
218e6c10adSSatish Balay     Level: intermediate
228e6c10adSSatish Balay 
23ab92ecdeSBarry Smith @*/
24ab92ecdeSBarry Smith PetscErrorCode MatDenseGetLocalMatrix(Mat A,Mat *B)
25ab92ecdeSBarry Smith {
26ab92ecdeSBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
27ace3abfcSBarry Smith   PetscBool      flg;
28ab92ecdeSBarry Smith 
29ab92ecdeSBarry Smith   PetscFunctionBegin;
30d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
31d5ea218eSStefano Zampini   PetscValidPointer(B,2);
329566063dSJacob Faibussowitsch   PetscCall(PetscObjectBaseTypeCompare((PetscObject)A,MATMPIDENSE,&flg));
332205254eSKarl Rupp   if (flg) *B = mat->A;
34f140bc17SStefano Zampini   else {
359566063dSJacob Faibussowitsch     PetscCall(PetscObjectBaseTypeCompare((PetscObject)A,MATSEQDENSE,&flg));
3628b400f6SJacob Faibussowitsch     PetscCheck(flg,PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Not for matrix type %s",((PetscObject)A)->type_name);
37f140bc17SStefano Zampini     *B = A;
38f140bc17SStefano Zampini   }
39ab92ecdeSBarry Smith   PetscFunctionReturn(0);
40ab92ecdeSBarry Smith }
41ab92ecdeSBarry Smith 
42a76f77c3SStefano Zampini PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s)
43a76f77c3SStefano Zampini {
44a76f77c3SStefano Zampini   Mat_MPIDense   *Amat = (Mat_MPIDense*)A->data;
45a76f77c3SStefano Zampini   Mat_MPIDense   *Bmat = (Mat_MPIDense*)B->data;
46a76f77c3SStefano Zampini 
47a76f77c3SStefano Zampini   PetscFunctionBegin;
489566063dSJacob Faibussowitsch   PetscCall(MatCopy(Amat->A,Bmat->A,s));
49a76f77c3SStefano Zampini   PetscFunctionReturn(0);
50a76f77c3SStefano Zampini }
51a76f77c3SStefano Zampini 
52ba8c8a56SBarry Smith PetscErrorCode MatGetRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
53ba8c8a56SBarry Smith {
54ba8c8a56SBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
55d0f46423SBarry Smith   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
56ba8c8a56SBarry Smith 
57ba8c8a56SBarry Smith   PetscFunctionBegin;
582c71b3e2SJacob Faibussowitsch   PetscCheckFalse(row < rstart || row >= rend,PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
59ba8c8a56SBarry Smith   lrow = row - rstart;
609566063dSJacob Faibussowitsch   PetscCall(MatGetRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v));
61ba8c8a56SBarry Smith   PetscFunctionReturn(0);
62ba8c8a56SBarry Smith }
63ba8c8a56SBarry Smith 
64637a0070SStefano Zampini PetscErrorCode MatRestoreRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
65ba8c8a56SBarry Smith {
66637a0070SStefano Zampini   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
67637a0070SStefano Zampini   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
68ba8c8a56SBarry Smith 
69ba8c8a56SBarry Smith   PetscFunctionBegin;
702c71b3e2SJacob Faibussowitsch   PetscCheckFalse(row < rstart || row >= rend,PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
71637a0070SStefano Zampini   lrow = row - rstart;
729566063dSJacob Faibussowitsch   PetscCall(MatRestoreRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v));
73ba8c8a56SBarry Smith   PetscFunctionReturn(0);
74ba8c8a56SBarry Smith }
75ba8c8a56SBarry Smith 
7611bd1e4dSLisandro Dalcin PetscErrorCode  MatGetDiagonalBlock_MPIDense(Mat A,Mat *a)
770de54da6SSatish Balay {
780de54da6SSatish Balay   Mat_MPIDense   *mdn = (Mat_MPIDense*)A->data;
79d0f46423SBarry Smith   PetscInt       m = A->rmap->n,rstart = A->rmap->rstart;
8087828ca2SBarry Smith   PetscScalar    *array;
810de54da6SSatish Balay   MPI_Comm       comm;
824b6ae80fSStefano Zampini   PetscBool      flg;
8311bd1e4dSLisandro Dalcin   Mat            B;
840de54da6SSatish Balay 
850de54da6SSatish Balay   PetscFunctionBegin;
869566063dSJacob Faibussowitsch   PetscCall(MatHasCongruentLayouts(A,&flg));
8728b400f6SJacob Faibussowitsch   PetscCheck(flg,PETSC_COMM_SELF,PETSC_ERR_SUP,"Only square matrices supported.");
889566063dSJacob Faibussowitsch   PetscCall(PetscObjectQuery((PetscObject)A,"DiagonalBlock",(PetscObject*)&B));
89616b8fbbSStefano Zampini   if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */
904b6ae80fSStefano Zampini 
919566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A,MATSEQDENSECUDA,&flg));
9228b400f6SJacob Faibussowitsch     PetscCheck(!flg,PETSC_COMM_SELF,PETSC_ERR_SUP,"Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature",MATSEQDENSECUDA);
939566063dSJacob Faibussowitsch     PetscCall(PetscObjectGetComm((PetscObject)(mdn->A),&comm));
949566063dSJacob Faibussowitsch     PetscCall(MatCreate(comm,&B));
959566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B,m,m,m,m));
969566063dSJacob Faibussowitsch     PetscCall(MatSetType(B,((PetscObject)mdn->A)->type_name));
979566063dSJacob Faibussowitsch     PetscCall(MatDenseGetArrayRead(mdn->A,(const PetscScalar**)&array));
989566063dSJacob Faibussowitsch     PetscCall(MatSeqDenseSetPreallocation(B,array+m*rstart));
999566063dSJacob Faibussowitsch     PetscCall(MatDenseRestoreArrayRead(mdn->A,(const PetscScalar**)&array));
1009566063dSJacob Faibussowitsch     PetscCall(MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY));
1019566063dSJacob Faibussowitsch     PetscCall(MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY));
1029566063dSJacob Faibussowitsch     PetscCall(PetscObjectCompose((PetscObject)A,"DiagonalBlock",(PetscObject)B));
10311bd1e4dSLisandro Dalcin     *a   = B;
1049566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&B));
1052205254eSKarl Rupp   } else *a = B;
1060de54da6SSatish Balay   PetscFunctionReturn(0);
1070de54da6SSatish Balay }
1080de54da6SSatish Balay 
10913f74950SBarry Smith PetscErrorCode MatSetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],const PetscScalar v[],InsertMode addv)
1108965ea79SLois Curfman McInnes {
11139b7565bSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)mat->data;
112d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
113ace3abfcSBarry Smith   PetscBool      roworiented = A->roworiented;
1148965ea79SLois Curfman McInnes 
1153a40ed3dSBarry Smith   PetscFunctionBegin;
1168965ea79SLois Curfman McInnes   for (i=0; i<m; i++) {
1175ef9f2a5SBarry Smith     if (idxm[i] < 0) continue;
11808401ef6SPierre Jolivet     PetscCheck(idxm[i] < mat->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
1198965ea79SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
1208965ea79SLois Curfman McInnes       row = idxm[i] - rstart;
12139b7565bSBarry Smith       if (roworiented) {
1229566063dSJacob Faibussowitsch         PetscCall(MatSetValues(A->A,1,&row,n,idxn,v+i*n,addv));
1233a40ed3dSBarry Smith       } else {
1248965ea79SLois Curfman McInnes         for (j=0; j<n; j++) {
1255ef9f2a5SBarry Smith           if (idxn[j] < 0) continue;
12608401ef6SPierre Jolivet           PetscCheck(idxn[j] < mat->cmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
1279566063dSJacob Faibussowitsch           PetscCall(MatSetValues(A->A,1,&row,1,&idxn[j],v+i+j*m,addv));
12839b7565bSBarry Smith         }
1298965ea79SLois Curfman McInnes       }
1302205254eSKarl Rupp     } else if (!A->donotstash) {
1315080c13bSMatthew G Knepley       mat->assembled = PETSC_FALSE;
13239b7565bSBarry Smith       if (roworiented) {
1339566063dSJacob Faibussowitsch         PetscCall(MatStashValuesRow_Private(&mat->stash,idxm[i],n,idxn,v+i*n,PETSC_FALSE));
134d36fbae8SSatish Balay       } else {
1359566063dSJacob Faibussowitsch         PetscCall(MatStashValuesCol_Private(&mat->stash,idxm[i],n,idxn,v+i,m,PETSC_FALSE));
13639b7565bSBarry Smith       }
137b49de8d1SLois Curfman McInnes     }
138b49de8d1SLois Curfman McInnes   }
1393a40ed3dSBarry Smith   PetscFunctionReturn(0);
140b49de8d1SLois Curfman McInnes }
141b49de8d1SLois Curfman McInnes 
14213f74950SBarry Smith PetscErrorCode MatGetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],PetscScalar v[])
143b49de8d1SLois Curfman McInnes {
144b49de8d1SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
145d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
146b49de8d1SLois Curfman McInnes 
1473a40ed3dSBarry Smith   PetscFunctionBegin;
148b49de8d1SLois Curfman McInnes   for (i=0; i<m; i++) {
14954c59aa7SJacob Faibussowitsch     if (idxm[i] < 0) continue; /* negative row */
15054c59aa7SJacob Faibussowitsch     PetscCheck(idxm[i] < mat->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
151b49de8d1SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
152b49de8d1SLois Curfman McInnes       row = idxm[i] - rstart;
153b49de8d1SLois Curfman McInnes       for (j=0; j<n; j++) {
15454c59aa7SJacob Faibussowitsch         if (idxn[j] < 0) continue; /* negative column */
15554c59aa7SJacob Faibussowitsch         PetscCheck(idxn[j] < mat->cmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
1569566063dSJacob Faibussowitsch         PetscCall(MatGetValues(mdn->A,1,&row,1,&idxn[j],v+i*n+j));
157b49de8d1SLois Curfman McInnes       }
158e7e72b3dSBarry Smith     } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only local values currently supported");
1598965ea79SLois Curfman McInnes   }
1603a40ed3dSBarry Smith   PetscFunctionReturn(0);
1618965ea79SLois Curfman McInnes }
1628965ea79SLois Curfman McInnes 
16349a6ff4bSBarry Smith static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A,PetscInt *lda)
16449a6ff4bSBarry Smith {
16549a6ff4bSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
16649a6ff4bSBarry Smith 
16749a6ff4bSBarry Smith   PetscFunctionBegin;
1689566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,lda));
16949a6ff4bSBarry Smith   PetscFunctionReturn(0);
17049a6ff4bSBarry Smith }
17149a6ff4bSBarry Smith 
172ad16ce7aSStefano Zampini static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A,PetscInt lda)
173ad16ce7aSStefano Zampini {
174ad16ce7aSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17517359960SJose E. Roman   PetscBool      iscuda;
176ad16ce7aSStefano Zampini 
177ad16ce7aSStefano Zampini   PetscFunctionBegin;
17817359960SJose E. Roman   if (!a->A) {
17928b400f6SJacob Faibussowitsch     PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1809566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(A->rmap));
1819566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(A->cmap));
1829566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF,&a->A));
1839566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->A));
1849566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(a->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N));
1859566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda));
1869566063dSJacob Faibussowitsch     PetscCall(MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE));
18717359960SJose E. Roman   }
1889566063dSJacob Faibussowitsch   PetscCall(MatDenseSetLDA(a->A,lda));
189ad16ce7aSStefano Zampini   PetscFunctionReturn(0);
190ad16ce7aSStefano Zampini }
191ad16ce7aSStefano Zampini 
192637a0070SStefano Zampini static PetscErrorCode MatDenseGetArray_MPIDense(Mat A,PetscScalar **array)
193ff14e315SSatish Balay {
194ff14e315SSatish Balay   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
195ff14e315SSatish Balay 
1963a40ed3dSBarry Smith   PetscFunctionBegin;
19728b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1989566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(a->A,array));
1993a40ed3dSBarry Smith   PetscFunctionReturn(0);
200ff14e315SSatish Balay }
201ff14e315SSatish Balay 
202637a0070SStefano Zampini static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A,const PetscScalar **array)
2038572280aSBarry Smith {
2048572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2058572280aSBarry Smith 
2068572280aSBarry Smith   PetscFunctionBegin;
20728b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2089566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,array));
2098572280aSBarry Smith   PetscFunctionReturn(0);
2108572280aSBarry Smith }
2118572280aSBarry Smith 
2126947451fSStefano Zampini static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A,PetscScalar **array)
2136947451fSStefano Zampini {
2146947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2156947451fSStefano Zampini 
2166947451fSStefano Zampini   PetscFunctionBegin;
21728b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2189566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(a->A,array));
2196947451fSStefano Zampini   PetscFunctionReturn(0);
2206947451fSStefano Zampini }
2216947451fSStefano Zampini 
222637a0070SStefano Zampini static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A,const PetscScalar *array)
223d3042a70SBarry Smith {
224d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
225d3042a70SBarry Smith 
226d3042a70SBarry Smith   PetscFunctionBegin;
22728b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
22828b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2299566063dSJacob Faibussowitsch   PetscCall(MatDensePlaceArray(a->A,array));
230d3042a70SBarry Smith   PetscFunctionReturn(0);
231d3042a70SBarry Smith }
232d3042a70SBarry Smith 
233d3042a70SBarry Smith static PetscErrorCode MatDenseResetArray_MPIDense(Mat A)
234d3042a70SBarry Smith {
235d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
236d3042a70SBarry Smith 
237d3042a70SBarry Smith   PetscFunctionBegin;
23828b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
23928b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2409566063dSJacob Faibussowitsch   PetscCall(MatDenseResetArray(a->A));
241d3042a70SBarry Smith   PetscFunctionReturn(0);
242d3042a70SBarry Smith }
243d3042a70SBarry Smith 
244d5ea218eSStefano Zampini static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A,const PetscScalar *array)
245d5ea218eSStefano Zampini {
246d5ea218eSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
247d5ea218eSStefano Zampini 
248d5ea218eSStefano Zampini   PetscFunctionBegin;
24928b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
25028b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2519566063dSJacob Faibussowitsch   PetscCall(MatDenseReplaceArray(a->A,array));
252d5ea218eSStefano Zampini   PetscFunctionReturn(0);
253d5ea218eSStefano Zampini }
254d5ea218eSStefano Zampini 
2557dae84e0SHong Zhang static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B)
256ca3fa75bSLois Curfman McInnes {
257ca3fa75bSLois Curfman McInnes   Mat_MPIDense      *mat  = (Mat_MPIDense*)A->data,*newmatd;
258637a0070SStefano Zampini   PetscInt          lda,i,j,rstart,rend,nrows,ncols,Ncols,nlrows,nlcols;
2595d0c19d7SBarry Smith   const PetscInt    *irow,*icol;
260637a0070SStefano Zampini   const PetscScalar *v;
261637a0070SStefano Zampini   PetscScalar       *bv;
262ca3fa75bSLois Curfman McInnes   Mat               newmat;
2634aa3045dSJed Brown   IS                iscol_local;
26442a884f0SBarry Smith   MPI_Comm          comm_is,comm_mat;
265ca3fa75bSLois Curfman McInnes 
266ca3fa75bSLois Curfman McInnes   PetscFunctionBegin;
2679566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm_mat));
2689566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)iscol,&comm_is));
26908401ef6SPierre Jolivet   PetscCheck(comm_mat == comm_is,PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"IS communicator must match matrix communicator");
27042a884f0SBarry Smith 
2719566063dSJacob Faibussowitsch   PetscCall(ISAllGather(iscol,&iscol_local));
2729566063dSJacob Faibussowitsch   PetscCall(ISGetIndices(isrow,&irow));
2739566063dSJacob Faibussowitsch   PetscCall(ISGetIndices(iscol_local,&icol));
2749566063dSJacob Faibussowitsch   PetscCall(ISGetLocalSize(isrow,&nrows));
2759566063dSJacob Faibussowitsch   PetscCall(ISGetLocalSize(iscol,&ncols));
2769566063dSJacob Faibussowitsch   PetscCall(ISGetSize(iscol,&Ncols)); /* global number of columns, size of iscol_local */
277ca3fa75bSLois Curfman McInnes 
278ca3fa75bSLois Curfman McInnes   /* No parallel redistribution currently supported! Should really check each index set
2797eba5e9cSLois Curfman McInnes      to comfirm that it is OK.  ... Currently supports only submatrix same partitioning as
2807eba5e9cSLois Curfman McInnes      original matrix! */
281ca3fa75bSLois Curfman McInnes 
2829566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(A,&nlrows,&nlcols));
2839566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRange(A,&rstart,&rend));
284ca3fa75bSLois Curfman McInnes 
285ca3fa75bSLois Curfman McInnes   /* Check submatrix call */
286ca3fa75bSLois Curfman McInnes   if (scall == MAT_REUSE_MATRIX) {
287e32f2f54SBarry Smith     /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */
2887eba5e9cSLois Curfman McInnes     /* Really need to test rows and column sizes! */
289ca3fa75bSLois Curfman McInnes     newmat = *B;
290ca3fa75bSLois Curfman McInnes   } else {
291ca3fa75bSLois Curfman McInnes     /* Create and fill new matrix */
2929566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&newmat));
2939566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(newmat,nrows,ncols,PETSC_DECIDE,Ncols));
2949566063dSJacob Faibussowitsch     PetscCall(MatSetType(newmat,((PetscObject)A)->type_name));
2959566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(newmat,NULL));
296ca3fa75bSLois Curfman McInnes   }
297ca3fa75bSLois Curfman McInnes 
298ca3fa75bSLois Curfman McInnes   /* Now extract the data pointers and do the copy, column at a time */
299ca3fa75bSLois Curfman McInnes   newmatd = (Mat_MPIDense*)newmat->data;
3009566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(newmatd->A,&bv));
3019566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(mat->A,&v));
3029566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(mat->A,&lda));
3034aa3045dSJed Brown   for (i=0; i<Ncols; i++) {
304637a0070SStefano Zampini     const PetscScalar *av = v + lda*icol[i];
305ca3fa75bSLois Curfman McInnes     for (j=0; j<nrows; j++) {
3067eba5e9cSLois Curfman McInnes       *bv++ = av[irow[j] - rstart];
307ca3fa75bSLois Curfman McInnes     }
308ca3fa75bSLois Curfman McInnes   }
3099566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(mat->A,&v));
3109566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(newmatd->A,&bv));
311ca3fa75bSLois Curfman McInnes 
312ca3fa75bSLois Curfman McInnes   /* Assemble the matrices so that the correct flags are set */
3139566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(newmat,MAT_FINAL_ASSEMBLY));
3149566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(newmat,MAT_FINAL_ASSEMBLY));
315ca3fa75bSLois Curfman McInnes 
316ca3fa75bSLois Curfman McInnes   /* Free work space */
3179566063dSJacob Faibussowitsch   PetscCall(ISRestoreIndices(isrow,&irow));
3189566063dSJacob Faibussowitsch   PetscCall(ISRestoreIndices(iscol_local,&icol));
3199566063dSJacob Faibussowitsch   PetscCall(ISDestroy(&iscol_local));
320ca3fa75bSLois Curfman McInnes   *B   = newmat;
321ca3fa75bSLois Curfman McInnes   PetscFunctionReturn(0);
322ca3fa75bSLois Curfman McInnes }
323ca3fa75bSLois Curfman McInnes 
324637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A,PetscScalar **array)
325ff14e315SSatish Balay {
32673a71a0fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
32773a71a0fSBarry Smith 
3283a40ed3dSBarry Smith   PetscFunctionBegin;
3299566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(a->A,array));
3303a40ed3dSBarry Smith   PetscFunctionReturn(0);
331ff14e315SSatish Balay }
332ff14e315SSatish Balay 
333637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A,const PetscScalar **array)
3348572280aSBarry Smith {
3358572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3368572280aSBarry Smith 
3378572280aSBarry Smith   PetscFunctionBegin;
3389566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,array));
3398572280aSBarry Smith   PetscFunctionReturn(0);
3408572280aSBarry Smith }
3418572280aSBarry Smith 
3426947451fSStefano Zampini PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A,PetscScalar **array)
3436947451fSStefano Zampini {
3446947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3456947451fSStefano Zampini 
3466947451fSStefano Zampini   PetscFunctionBegin;
3479566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(a->A,array));
3486947451fSStefano Zampini   PetscFunctionReturn(0);
3496947451fSStefano Zampini }
3506947451fSStefano Zampini 
351dfbe8321SBarry Smith PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat,MatAssemblyType mode)
3528965ea79SLois Curfman McInnes {
35339ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
35413f74950SBarry Smith   PetscInt       nstash,reallocs;
3558965ea79SLois Curfman McInnes 
3563a40ed3dSBarry Smith   PetscFunctionBegin;
3574067683fSStefano Zampini   if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(0);
3588965ea79SLois Curfman McInnes 
3599566063dSJacob Faibussowitsch   PetscCall(MatStashScatterBegin_Private(mat,&mat->stash,mat->rmap->range));
3609566063dSJacob Faibussowitsch   PetscCall(MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs));
3619566063dSJacob Faibussowitsch   PetscCall(PetscInfo(mdn->A,"Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n",nstash,reallocs));
3623a40ed3dSBarry Smith   PetscFunctionReturn(0);
3638965ea79SLois Curfman McInnes }
3648965ea79SLois Curfman McInnes 
365dfbe8321SBarry Smith PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat,MatAssemblyType mode)
3668965ea79SLois Curfman McInnes {
36739ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn=(Mat_MPIDense*)mat->data;
36813f74950SBarry Smith   PetscInt       i,*row,*col,flg,j,rstart,ncols;
36913f74950SBarry Smith   PetscMPIInt    n;
37087828ca2SBarry Smith   PetscScalar    *val;
3718965ea79SLois Curfman McInnes 
3723a40ed3dSBarry Smith   PetscFunctionBegin;
373910cf402Sprj-   if (!mdn->donotstash && !mat->nooffprocentries) {
3748965ea79SLois Curfman McInnes     /*  wait on receives */
3757ef1d9bdSSatish Balay     while (1) {
3769566063dSJacob Faibussowitsch       PetscCall(MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg));
3777ef1d9bdSSatish Balay       if (!flg) break;
3788965ea79SLois Curfman McInnes 
3797ef1d9bdSSatish Balay       for (i=0; i<n;) {
3807ef1d9bdSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
3812205254eSKarl Rupp         for (j=i,rstart=row[j]; j<n; j++) {
3822205254eSKarl Rupp           if (row[j] != rstart) break;
3832205254eSKarl Rupp         }
3847ef1d9bdSSatish Balay         if (j < n) ncols = j-i;
3857ef1d9bdSSatish Balay         else       ncols = n-i;
3867ef1d9bdSSatish Balay         /* Now assemble all these values with a single function call */
3879566063dSJacob Faibussowitsch         PetscCall(MatSetValues_MPIDense(mat,1,row+i,ncols,col+i,val+i,mat->insertmode));
3887ef1d9bdSSatish Balay         i    = j;
3898965ea79SLois Curfman McInnes       }
3907ef1d9bdSSatish Balay     }
3919566063dSJacob Faibussowitsch     PetscCall(MatStashScatterEnd_Private(&mat->stash));
392910cf402Sprj-   }
3938965ea79SLois Curfman McInnes 
3949566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(mdn->A,mode));
3959566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(mdn->A,mode));
3963a40ed3dSBarry Smith   PetscFunctionReturn(0);
3978965ea79SLois Curfman McInnes }
3988965ea79SLois Curfman McInnes 
399dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_MPIDense(Mat A)
4008965ea79SLois Curfman McInnes {
40139ddd567SLois Curfman McInnes   Mat_MPIDense   *l = (Mat_MPIDense*)A->data;
4023a40ed3dSBarry Smith 
4033a40ed3dSBarry Smith   PetscFunctionBegin;
4049566063dSJacob Faibussowitsch   PetscCall(MatZeroEntries(l->A));
4053a40ed3dSBarry Smith   PetscFunctionReturn(0);
4068965ea79SLois Curfman McInnes }
4078965ea79SLois Curfman McInnes 
408637a0070SStefano Zampini PetscErrorCode MatZeroRows_MPIDense(Mat A,PetscInt n,const PetscInt rows[],PetscScalar diag,Vec x,Vec b)
4098965ea79SLois Curfman McInnes {
41039ddd567SLois Curfman McInnes   Mat_MPIDense      *l = (Mat_MPIDense*)A->data;
411637a0070SStefano Zampini   PetscInt          i,len,*lrows;
412637a0070SStefano Zampini 
413637a0070SStefano Zampini   PetscFunctionBegin;
414637a0070SStefano Zampini   /* get locally owned rows */
4159566063dSJacob Faibussowitsch   PetscCall(PetscLayoutMapLocal(A->rmap,n,rows,&len,&lrows,NULL));
416637a0070SStefano Zampini   /* fix right hand side if needed */
417637a0070SStefano Zampini   if (x && b) {
41897b48c8fSBarry Smith     const PetscScalar *xx;
41997b48c8fSBarry Smith     PetscScalar       *bb;
4208965ea79SLois Curfman McInnes 
4219566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(x, &xx));
4229566063dSJacob Faibussowitsch     PetscCall(VecGetArrayWrite(b, &bb));
423637a0070SStefano Zampini     for (i=0;i<len;++i) bb[lrows[i]] = diag*xx[lrows[i]];
4249566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(x, &xx));
4259566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayWrite(b, &bb));
42697b48c8fSBarry Smith   }
4279566063dSJacob Faibussowitsch   PetscCall(MatZeroRows(l->A,len,lrows,0.0,NULL,NULL));
428e2eb51b1SBarry Smith   if (diag != 0.0) {
429637a0070SStefano Zampini     Vec d;
430b9679d65SBarry Smith 
4319566063dSJacob Faibussowitsch     PetscCall(MatCreateVecs(A,NULL,&d));
4329566063dSJacob Faibussowitsch     PetscCall(VecSet(d,diag));
4339566063dSJacob Faibussowitsch     PetscCall(MatDiagonalSet(A,d,INSERT_VALUES));
4349566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&d));
435b9679d65SBarry Smith   }
4369566063dSJacob Faibussowitsch   PetscCall(PetscFree(lrows));
4373a40ed3dSBarry Smith   PetscFunctionReturn(0);
4388965ea79SLois Curfman McInnes }
4398965ea79SLois Curfman McInnes 
440cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat,Vec,Vec);
441cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat,Vec,Vec,Vec);
442cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat,Vec,Vec);
443cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat,Vec,Vec,Vec);
444cc2e6a90SBarry Smith 
445dfbe8321SBarry Smith PetscErrorCode MatMult_MPIDense(Mat mat,Vec xx,Vec yy)
4468965ea79SLois Curfman McInnes {
44739ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
448637a0070SStefano Zampini   const PetscScalar *ax;
449637a0070SStefano Zampini   PetscScalar       *ay;
450d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
451c456f294SBarry Smith 
4523a40ed3dSBarry Smith   PetscFunctionBegin;
453*6f08ad05SPierre Jolivet   if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
4549566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(xx,&ax,&axmtype));
4559566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype));
4569566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE));
4579566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE));
4589566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(mdn->lvec,&ay));
4599566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(xx,&ax));
4609566063dSJacob Faibussowitsch   PetscCall((*mdn->A->ops->mult)(mdn->A,mdn->lvec,yy));
4613a40ed3dSBarry Smith   PetscFunctionReturn(0);
4628965ea79SLois Curfman McInnes }
4638965ea79SLois Curfman McInnes 
464dfbe8321SBarry Smith PetscErrorCode MatMultAdd_MPIDense(Mat mat,Vec xx,Vec yy,Vec zz)
4658965ea79SLois Curfman McInnes {
46639ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
467637a0070SStefano Zampini   const PetscScalar *ax;
468637a0070SStefano Zampini   PetscScalar       *ay;
469d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
470c456f294SBarry Smith 
4713a40ed3dSBarry Smith   PetscFunctionBegin;
472*6f08ad05SPierre Jolivet   if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
4739566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(xx,&ax,&axmtype));
4749566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype));
4759566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE));
4769566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE));
4779566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(mdn->lvec,&ay));
4789566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(xx,&ax));
4799566063dSJacob Faibussowitsch   PetscCall((*mdn->A->ops->multadd)(mdn->A,mdn->lvec,yy,zz));
4803a40ed3dSBarry Smith   PetscFunctionReturn(0);
4818965ea79SLois Curfman McInnes }
4828965ea79SLois Curfman McInnes 
483dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_MPIDense(Mat A,Vec xx,Vec yy)
484096963f5SLois Curfman McInnes {
485096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
486637a0070SStefano Zampini   const PetscScalar *ax;
487637a0070SStefano Zampini   PetscScalar       *ay;
488d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
489096963f5SLois Curfman McInnes 
4903a40ed3dSBarry Smith   PetscFunctionBegin;
491*6f08ad05SPierre Jolivet   if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
4929566063dSJacob Faibussowitsch   PetscCall(VecSet(yy,0.0));
4939566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->multtranspose)(a->A,xx,a->lvec));
4949566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype));
4959566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(yy,&ay,&aymtype));
4969566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM));
4979566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM));
4989566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(a->lvec,&ax));
4999566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(yy,&ay));
5003a40ed3dSBarry Smith   PetscFunctionReturn(0);
501096963f5SLois Curfman McInnes }
502096963f5SLois Curfman McInnes 
503dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A,Vec xx,Vec yy,Vec zz)
504096963f5SLois Curfman McInnes {
505096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
506637a0070SStefano Zampini   const PetscScalar *ax;
507637a0070SStefano Zampini   PetscScalar       *ay;
508d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
509096963f5SLois Curfman McInnes 
5103a40ed3dSBarry Smith   PetscFunctionBegin;
511*6f08ad05SPierre Jolivet   if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
5129566063dSJacob Faibussowitsch   PetscCall(VecCopy(yy,zz));
5139566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->multtranspose)(a->A,xx,a->lvec));
5149566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype));
5159566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(zz,&ay,&aymtype));
5169566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM));
5179566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM));
5189566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(a->lvec,&ax));
5199566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(zz,&ay));
5203a40ed3dSBarry Smith   PetscFunctionReturn(0);
521096963f5SLois Curfman McInnes }
522096963f5SLois Curfman McInnes 
523dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_MPIDense(Mat A,Vec v)
5248965ea79SLois Curfman McInnes {
52539ddd567SLois Curfman McInnes   Mat_MPIDense      *a    = (Mat_MPIDense*)A->data;
526637a0070SStefano Zampini   PetscInt          lda,len,i,n,m = A->rmap->n,radd;
52787828ca2SBarry Smith   PetscScalar       *x,zero = 0.0;
528637a0070SStefano Zampini   const PetscScalar *av;
529ed3cc1f0SBarry Smith 
5303a40ed3dSBarry Smith   PetscFunctionBegin;
5319566063dSJacob Faibussowitsch   PetscCall(VecSet(v,zero));
5329566063dSJacob Faibussowitsch   PetscCall(VecGetArray(v,&x));
5339566063dSJacob Faibussowitsch   PetscCall(VecGetSize(v,&n));
53408401ef6SPierre Jolivet   PetscCheck(n == A->rmap->N,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Nonconforming mat and vec");
535d0f46423SBarry Smith   len  = PetscMin(a->A->rmap->n,a->A->cmap->n);
536d0f46423SBarry Smith   radd = A->rmap->rstart*m;
5379566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&av));
5389566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
53944cd7ae7SLois Curfman McInnes   for (i=0; i<len; i++) {
540637a0070SStefano Zampini     x[i] = av[radd + i*lda + i];
541096963f5SLois Curfman McInnes   }
5429566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&av));
5439566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(v,&x));
5443a40ed3dSBarry Smith   PetscFunctionReturn(0);
5458965ea79SLois Curfman McInnes }
5468965ea79SLois Curfman McInnes 
547dfbe8321SBarry Smith PetscErrorCode MatDestroy_MPIDense(Mat mat)
5488965ea79SLois Curfman McInnes {
5493501a2bdSLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
550ed3cc1f0SBarry Smith 
5513a40ed3dSBarry Smith   PetscFunctionBegin;
552aa482453SBarry Smith #if defined(PETSC_USE_LOG)
553c0aa6a63SJacob Faibussowitsch   PetscLogObjectState((PetscObject)mat,"Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT,mat->rmap->N,mat->cmap->N);
5548965ea79SLois Curfman McInnes #endif
5559566063dSJacob Faibussowitsch   PetscCall(MatStashDestroy_Private(&mat->stash));
55628b400f6SJacob Faibussowitsch   PetscCheck(!mdn->vecinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
55728b400f6SJacob Faibussowitsch   PetscCheck(!mdn->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
5589566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&mdn->A));
5599566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&mdn->lvec));
5609566063dSJacob Faibussowitsch   PetscCall(PetscSFDestroy(&mdn->Mvctx));
5619566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&mdn->cvec));
5629566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&mdn->cmat));
56301b82886SBarry Smith 
5649566063dSJacob Faibussowitsch   PetscCall(PetscFree(mat->data));
5659566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)mat,NULL));
5668baccfbdSHong Zhang 
5679566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",NULL));
5689566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",NULL));
5699566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",NULL));
5709566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",NULL));
5719566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",NULL));
5729566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",NULL));
5739566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",NULL));
5749566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",NULL));
5759566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",NULL));
5769566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",NULL));
5779566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",NULL));
5789566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpiaij_mpidense_C",NULL));
5799566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpiaij_C",NULL));
5808baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
5819566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",NULL));
5828baccfbdSHong Zhang #endif
583d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
5849566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",NULL));
585d24d4204SJose E. Roman #endif
5869566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",NULL));
5879566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",NULL));
5889566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",NULL));
5896718818eSStefano Zampini #if defined (PETSC_HAVE_CUDA)
5909566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",NULL));
5919566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",NULL));
5926718818eSStefano Zampini #endif
5939566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",NULL));
5949566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",NULL));
5959566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",NULL));
5969566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",NULL));
5979566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",NULL));
5989566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",NULL));
5999566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",NULL));
6009566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",NULL));
6019566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",NULL));
6029566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",NULL));
6033a40ed3dSBarry Smith   PetscFunctionReturn(0);
6048965ea79SLois Curfman McInnes }
60539ddd567SLois Curfman McInnes 
60652c5f739Sprj- PETSC_INTERN PetscErrorCode MatView_SeqDense(Mat,PetscViewer);
60752c5f739Sprj- 
6089804daf3SBarry Smith #include <petscdraw.h>
6096849ba73SBarry Smith static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
6108965ea79SLois Curfman McInnes {
61139ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
612616b8fbbSStefano Zampini   PetscMPIInt       rank;
61319fd82e9SBarry Smith   PetscViewerType   vtype;
614ace3abfcSBarry Smith   PetscBool         iascii,isdraw;
615b0a32e0cSBarry Smith   PetscViewer       sviewer;
616f3ef73ceSBarry Smith   PetscViewerFormat format;
6178965ea79SLois Curfman McInnes 
6183a40ed3dSBarry Smith   PetscFunctionBegin;
6199566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat),&rank));
6209566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii));
6219566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw));
62232077d6dSBarry Smith   if (iascii) {
6239566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetType(viewer,&vtype));
6249566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetFormat(viewer,&format));
625456192e2SBarry Smith     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
6264e220ebcSLois Curfman McInnes       MatInfo info;
6279566063dSJacob Faibussowitsch       PetscCall(MatGetInfo(mat,MAT_LOCAL,&info));
6289566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPushSynchronized(viewer));
6299566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIISynchronizedPrintf(viewer,"  [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n",rank,mat->rmap->n,(PetscInt)info.nz_used,(PetscInt)info.nz_allocated,(PetscInt)info.memory));
6309566063dSJacob Faibussowitsch       PetscCall(PetscViewerFlush(viewer));
6319566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPopSynchronized(viewer));
632*6f08ad05SPierre Jolivet       if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx,viewer));
6333a40ed3dSBarry Smith       PetscFunctionReturn(0);
634fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
6353a40ed3dSBarry Smith       PetscFunctionReturn(0);
6368965ea79SLois Curfman McInnes     }
637f1af5d2fSBarry Smith   } else if (isdraw) {
638b0a32e0cSBarry Smith     PetscDraw draw;
639ace3abfcSBarry Smith     PetscBool isnull;
640f1af5d2fSBarry Smith 
6419566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawGetDraw(viewer,0,&draw));
6429566063dSJacob Faibussowitsch     PetscCall(PetscDrawIsNull(draw,&isnull));
643f1af5d2fSBarry Smith     if (isnull) PetscFunctionReturn(0);
644f1af5d2fSBarry Smith   }
64577ed5343SBarry Smith 
6467da1fb6eSBarry Smith   {
6478965ea79SLois Curfman McInnes     /* assemble the entire matrix onto first processor. */
6488965ea79SLois Curfman McInnes     Mat         A;
649d0f46423SBarry Smith     PetscInt    M = mat->rmap->N,N = mat->cmap->N,m,row,i,nz;
650ba8c8a56SBarry Smith     PetscInt    *cols;
651ba8c8a56SBarry Smith     PetscScalar *vals;
6528965ea79SLois Curfman McInnes 
6539566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)mat),&A));
654dd400576SPatrick Sanan     if (rank == 0) {
6559566063dSJacob Faibussowitsch       PetscCall(MatSetSizes(A,M,N,M,N));
6563a40ed3dSBarry Smith     } else {
6579566063dSJacob Faibussowitsch       PetscCall(MatSetSizes(A,0,0,M,N));
6588965ea79SLois Curfman McInnes     }
6597adad957SLisandro Dalcin     /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */
6609566063dSJacob Faibussowitsch     PetscCall(MatSetType(A,MATMPIDENSE));
6619566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(A,NULL));
6629566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)mat,(PetscObject)A));
6638965ea79SLois Curfman McInnes 
66439ddd567SLois Curfman McInnes     /* Copy the matrix ... This isn't the most efficient means,
66539ddd567SLois Curfman McInnes        but it's quick for now */
66651022da4SBarry Smith     A->insertmode = INSERT_VALUES;
6672205254eSKarl Rupp 
6682205254eSKarl Rupp     row = mat->rmap->rstart;
6692205254eSKarl Rupp     m   = mdn->A->rmap->n;
6708965ea79SLois Curfman McInnes     for (i=0; i<m; i++) {
6719566063dSJacob Faibussowitsch       PetscCall(MatGetRow_MPIDense(mat,row,&nz,&cols,&vals));
6729566063dSJacob Faibussowitsch       PetscCall(MatSetValues_MPIDense(A,1,&row,nz,cols,vals,INSERT_VALUES));
6739566063dSJacob Faibussowitsch       PetscCall(MatRestoreRow_MPIDense(mat,row,&nz,&cols,&vals));
67439ddd567SLois Curfman McInnes       row++;
6758965ea79SLois Curfman McInnes     }
6768965ea79SLois Curfman McInnes 
6779566063dSJacob Faibussowitsch     PetscCall(MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY));
6789566063dSJacob Faibussowitsch     PetscCall(MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY));
6799566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetSubViewer(viewer,PETSC_COMM_SELF,&sviewer));
680dd400576SPatrick Sanan     if (rank == 0) {
6819566063dSJacob Faibussowitsch       PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense*)(A->data))->A,((PetscObject)mat)->name));
6829566063dSJacob Faibussowitsch       PetscCall(MatView_SeqDense(((Mat_MPIDense*)(A->data))->A,sviewer));
6838965ea79SLois Curfman McInnes     }
6849566063dSJacob Faibussowitsch     PetscCall(PetscViewerRestoreSubViewer(viewer,PETSC_COMM_SELF,&sviewer));
6859566063dSJacob Faibussowitsch     PetscCall(PetscViewerFlush(viewer));
6869566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&A));
6878965ea79SLois Curfman McInnes   }
6883a40ed3dSBarry Smith   PetscFunctionReturn(0);
6898965ea79SLois Curfman McInnes }
6908965ea79SLois Curfman McInnes 
691dfbe8321SBarry Smith PetscErrorCode MatView_MPIDense(Mat mat,PetscViewer viewer)
6928965ea79SLois Curfman McInnes {
693ace3abfcSBarry Smith   PetscBool      iascii,isbinary,isdraw,issocket;
6948965ea79SLois Curfman McInnes 
695433994e6SBarry Smith   PetscFunctionBegin;
6969566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii));
6979566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary));
6989566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERSOCKET,&issocket));
6999566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw));
7000f5bd95cSBarry Smith 
70132077d6dSBarry Smith   if (iascii || issocket || isdraw) {
7029566063dSJacob Faibussowitsch     PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat,viewer));
7030f5bd95cSBarry Smith   } else if (isbinary) {
7049566063dSJacob Faibussowitsch     PetscCall(MatView_Dense_Binary(mat,viewer));
70511aeaf0aSBarry Smith   }
7063a40ed3dSBarry Smith   PetscFunctionReturn(0);
7078965ea79SLois Curfman McInnes }
7088965ea79SLois Curfman McInnes 
709dfbe8321SBarry Smith PetscErrorCode MatGetInfo_MPIDense(Mat A,MatInfoType flag,MatInfo *info)
7108965ea79SLois Curfman McInnes {
7113501a2bdSLois Curfman McInnes   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
7123501a2bdSLois Curfman McInnes   Mat            mdn  = mat->A;
7133966268fSBarry Smith   PetscLogDouble isend[5],irecv[5];
7148965ea79SLois Curfman McInnes 
7153a40ed3dSBarry Smith   PetscFunctionBegin;
7164e220ebcSLois Curfman McInnes   info->block_size = 1.0;
7172205254eSKarl Rupp 
7189566063dSJacob Faibussowitsch   PetscCall(MatGetInfo(mdn,MAT_LOCAL,info));
7192205254eSKarl Rupp 
7204e220ebcSLois Curfman McInnes   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
7214e220ebcSLois Curfman McInnes   isend[3] = info->memory;  isend[4] = info->mallocs;
7228965ea79SLois Curfman McInnes   if (flag == MAT_LOCAL) {
7234e220ebcSLois Curfman McInnes     info->nz_used      = isend[0];
7244e220ebcSLois Curfman McInnes     info->nz_allocated = isend[1];
7254e220ebcSLois Curfman McInnes     info->nz_unneeded  = isend[2];
7264e220ebcSLois Curfman McInnes     info->memory       = isend[3];
7274e220ebcSLois Curfman McInnes     info->mallocs      = isend[4];
7288965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_MAX) {
7291c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_MAX,PetscObjectComm((PetscObject)A)));
7302205254eSKarl Rupp 
7314e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7324e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7334e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7344e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7354e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7368965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_SUM) {
7371c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_SUM,PetscObjectComm((PetscObject)A)));
7382205254eSKarl Rupp 
7394e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7404e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7414e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7424e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7434e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7448965ea79SLois Curfman McInnes   }
7454e220ebcSLois Curfman McInnes   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
7464e220ebcSLois Curfman McInnes   info->fill_ratio_needed = 0;
7474e220ebcSLois Curfman McInnes   info->factor_mallocs    = 0;
7483a40ed3dSBarry Smith   PetscFunctionReturn(0);
7498965ea79SLois Curfman McInnes }
7508965ea79SLois Curfman McInnes 
751ace3abfcSBarry Smith PetscErrorCode MatSetOption_MPIDense(Mat A,MatOption op,PetscBool flg)
7528965ea79SLois Curfman McInnes {
75339ddd567SLois Curfman McInnes   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
7548965ea79SLois Curfman McInnes 
7553a40ed3dSBarry Smith   PetscFunctionBegin;
75612c028f9SKris Buschelman   switch (op) {
757512a5fc5SBarry Smith   case MAT_NEW_NONZERO_LOCATIONS:
75812c028f9SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
75912c028f9SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
76043674050SBarry Smith     MatCheckPreallocated(A,1);
7619566063dSJacob Faibussowitsch     PetscCall(MatSetOption(a->A,op,flg));
76212c028f9SKris Buschelman     break;
76312c028f9SKris Buschelman   case MAT_ROW_ORIENTED:
76443674050SBarry Smith     MatCheckPreallocated(A,1);
7654e0d8c25SBarry Smith     a->roworiented = flg;
7669566063dSJacob Faibussowitsch     PetscCall(MatSetOption(a->A,op,flg));
76712c028f9SKris Buschelman     break;
7688c78258cSHong Zhang   case MAT_FORCE_DIAGONAL_ENTRIES:
76913fa8e87SLisandro Dalcin   case MAT_KEEP_NONZERO_PATTERN:
77012c028f9SKris Buschelman   case MAT_USE_HASH_TABLE:
771071fcb05SBarry Smith   case MAT_SORTED_FULL:
7729566063dSJacob Faibussowitsch     PetscCall(PetscInfo(A,"Option %s ignored\n",MatOptions[op]));
77312c028f9SKris Buschelman     break;
77412c028f9SKris Buschelman   case MAT_IGNORE_OFF_PROC_ENTRIES:
7754e0d8c25SBarry Smith     a->donotstash = flg;
77612c028f9SKris Buschelman     break;
77777e54ba9SKris Buschelman   case MAT_SYMMETRIC:
77877e54ba9SKris Buschelman   case MAT_STRUCTURALLY_SYMMETRIC:
7799a4540c5SBarry Smith   case MAT_HERMITIAN:
7809a4540c5SBarry Smith   case MAT_SYMMETRY_ETERNAL:
781600fe468SBarry Smith   case MAT_IGNORE_LOWER_TRIANGULAR:
7825d7aebe8SStefano Zampini   case MAT_IGNORE_ZERO_ENTRIES:
7839566063dSJacob Faibussowitsch     PetscCall(PetscInfo(A,"Option %s ignored\n",MatOptions[op]));
78477e54ba9SKris Buschelman     break;
78512c028f9SKris Buschelman   default:
78698921bdaSJacob Faibussowitsch     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"unknown option %s",MatOptions[op]);
7873a40ed3dSBarry Smith   }
7883a40ed3dSBarry Smith   PetscFunctionReturn(0);
7898965ea79SLois Curfman McInnes }
7908965ea79SLois Curfman McInnes 
791dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_MPIDense(Mat A,Vec ll,Vec rr)
7925b2fa520SLois Curfman McInnes {
7935b2fa520SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
794637a0070SStefano Zampini   const PetscScalar *l;
795637a0070SStefano Zampini   PetscScalar       x,*v,*vv,*r;
796637a0070SStefano Zampini   PetscInt          i,j,s2a,s3a,s2,s3,m=mdn->A->rmap->n,n=mdn->A->cmap->n,lda;
7975b2fa520SLois Curfman McInnes 
7985b2fa520SLois Curfman McInnes   PetscFunctionBegin;
7999566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(mdn->A,&vv));
8009566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(mdn->A,&lda));
8019566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(A,&s2,&s3));
8025b2fa520SLois Curfman McInnes   if (ll) {
8039566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(ll,&s2a));
80408401ef6SPierre Jolivet     PetscCheck(s2a == s2,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2);
8059566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(ll,&l));
8065b2fa520SLois Curfman McInnes     for (i=0; i<m; i++) {
8075b2fa520SLois Curfman McInnes       x = l[i];
808637a0070SStefano Zampini       v = vv + i;
809637a0070SStefano Zampini       for (j=0; j<n; j++) { (*v) *= x; v+= lda;}
8105b2fa520SLois Curfman McInnes     }
8119566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(ll,&l));
8129566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(1.0*n*m));
8135b2fa520SLois Curfman McInnes   }
8145b2fa520SLois Curfman McInnes   if (rr) {
815637a0070SStefano Zampini     const PetscScalar *ar;
816637a0070SStefano Zampini 
8179566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(rr,&s3a));
81808401ef6SPierre Jolivet     PetscCheck(s3a == s3,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3);
8199566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(rr,&ar));
820*6f08ad05SPierre Jolivet     if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
8219566063dSJacob Faibussowitsch     PetscCall(VecGetArray(mdn->lvec,&r));
8229566063dSJacob Faibussowitsch     PetscCall(PetscSFBcastBegin(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE));
8239566063dSJacob Faibussowitsch     PetscCall(PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE));
8249566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(rr,&ar));
8255b2fa520SLois Curfman McInnes     for (i=0; i<n; i++) {
8265b2fa520SLois Curfman McInnes       x = r[i];
827637a0070SStefano Zampini       v = vv + i*lda;
8282205254eSKarl Rupp       for (j=0; j<m; j++) (*v++) *= x;
8295b2fa520SLois Curfman McInnes     }
8309566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(mdn->lvec,&r));
8319566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(1.0*n*m));
8325b2fa520SLois Curfman McInnes   }
8339566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(mdn->A,&vv));
8345b2fa520SLois Curfman McInnes   PetscFunctionReturn(0);
8355b2fa520SLois Curfman McInnes }
8365b2fa520SLois Curfman McInnes 
837dfbe8321SBarry Smith PetscErrorCode MatNorm_MPIDense(Mat A,NormType type,PetscReal *nrm)
838096963f5SLois Curfman McInnes {
8393501a2bdSLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
84013f74950SBarry Smith   PetscInt          i,j;
841616b8fbbSStefano Zampini   PetscMPIInt       size;
842329f5518SBarry Smith   PetscReal         sum = 0.0;
843637a0070SStefano Zampini   const PetscScalar *av,*v;
8443501a2bdSLois Curfman McInnes 
8453a40ed3dSBarry Smith   PetscFunctionBegin;
8469566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(mdn->A,&av));
847637a0070SStefano Zampini   v    = av;
8489566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A),&size));
849616b8fbbSStefano Zampini   if (size == 1) {
8509566063dSJacob Faibussowitsch     PetscCall(MatNorm(mdn->A,type,nrm));
8513501a2bdSLois Curfman McInnes   } else {
8523501a2bdSLois Curfman McInnes     if (type == NORM_FROBENIUS) {
853d0f46423SBarry Smith       for (i=0; i<mdn->A->cmap->n*mdn->A->rmap->n; i++) {
854329f5518SBarry Smith         sum += PetscRealPart(PetscConj(*v)*(*v)); v++;
8553501a2bdSLois Curfman McInnes       }
8561c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(&sum,nrm,1,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A)));
8578f1a2a5eSBarry Smith       *nrm = PetscSqrtReal(*nrm);
8589566063dSJacob Faibussowitsch       PetscCall(PetscLogFlops(2.0*mdn->A->cmap->n*mdn->A->rmap->n));
8593a40ed3dSBarry Smith     } else if (type == NORM_1) {
860329f5518SBarry Smith       PetscReal *tmp,*tmp2;
8619566063dSJacob Faibussowitsch       PetscCall(PetscCalloc2(A->cmap->N,&tmp,A->cmap->N,&tmp2));
862064f8208SBarry Smith       *nrm = 0.0;
863637a0070SStefano Zampini       v    = av;
864d0f46423SBarry Smith       for (j=0; j<mdn->A->cmap->n; j++) {
865d0f46423SBarry Smith         for (i=0; i<mdn->A->rmap->n; i++) {
86667e560aaSBarry Smith           tmp[j] += PetscAbsScalar(*v);  v++;
8673501a2bdSLois Curfman McInnes         }
8683501a2bdSLois Curfman McInnes       }
8691c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(tmp,tmp2,A->cmap->N,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A)));
870d0f46423SBarry Smith       for (j=0; j<A->cmap->N; j++) {
871064f8208SBarry Smith         if (tmp2[j] > *nrm) *nrm = tmp2[j];
8723501a2bdSLois Curfman McInnes       }
8739566063dSJacob Faibussowitsch       PetscCall(PetscFree2(tmp,tmp2));
8749566063dSJacob Faibussowitsch       PetscCall(PetscLogFlops(A->cmap->n*A->rmap->n));
8753a40ed3dSBarry Smith     } else if (type == NORM_INFINITY) { /* max row norm */
876329f5518SBarry Smith       PetscReal ntemp;
8779566063dSJacob Faibussowitsch       PetscCall(MatNorm(mdn->A,type,&ntemp));
8781c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(&ntemp,nrm,1,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)A)));
879ce94432eSBarry Smith     } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for two norm");
8803501a2bdSLois Curfman McInnes   }
8819566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(mdn->A,&av));
8823a40ed3dSBarry Smith   PetscFunctionReturn(0);
8833501a2bdSLois Curfman McInnes }
8843501a2bdSLois Curfman McInnes 
885fc4dec0aSBarry Smith PetscErrorCode MatTranspose_MPIDense(Mat A,MatReuse reuse,Mat *matout)
8863501a2bdSLois Curfman McInnes {
8873501a2bdSLois Curfman McInnes   Mat_MPIDense   *a    = (Mat_MPIDense*)A->data;
8883501a2bdSLois Curfman McInnes   Mat            B;
889d0f46423SBarry Smith   PetscInt       M = A->rmap->N,N = A->cmap->N,m,n,*rwork,rstart = A->rmap->rstart;
890637a0070SStefano Zampini   PetscInt       j,i,lda;
89187828ca2SBarry Smith   PetscScalar    *v;
8923501a2bdSLois Curfman McInnes 
8933a40ed3dSBarry Smith   PetscFunctionBegin;
894cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) {
8959566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&B));
8969566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B,A->cmap->n,A->rmap->n,N,M));
8979566063dSJacob Faibussowitsch     PetscCall(MatSetType(B,((PetscObject)A)->type_name));
8989566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(B,NULL));
899637a0070SStefano Zampini   } else B = *matout;
9003501a2bdSLois Curfman McInnes 
901637a0070SStefano Zampini   m    = a->A->rmap->n; n = a->A->cmap->n;
9029566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,(const PetscScalar**)&v));
9039566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
9049566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(m,&rwork));
9053501a2bdSLois Curfman McInnes   for (i=0; i<m; i++) rwork[i] = rstart + i;
9061acff37aSSatish Balay   for (j=0; j<n; j++) {
9079566063dSJacob Faibussowitsch     PetscCall(MatSetValues(B,1,&j,m,rwork,v,INSERT_VALUES));
908637a0070SStefano Zampini     v   += lda;
9093501a2bdSLois Curfman McInnes   }
9109566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,(const PetscScalar**)&v));
9119566063dSJacob Faibussowitsch   PetscCall(PetscFree(rwork));
9129566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY));
9139566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY));
914cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) {
9153501a2bdSLois Curfman McInnes     *matout = B;
9163501a2bdSLois Curfman McInnes   } else {
9179566063dSJacob Faibussowitsch     PetscCall(MatHeaderMerge(A,&B));
9183501a2bdSLois Curfman McInnes   }
9193a40ed3dSBarry Smith   PetscFunctionReturn(0);
920096963f5SLois Curfman McInnes }
921096963f5SLois Curfman McInnes 
9226849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat,MatDuplicateOption,Mat*);
92352c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat,PetscScalar);
9248965ea79SLois Curfman McInnes 
9254994cf47SJed Brown PetscErrorCode MatSetUp_MPIDense(Mat A)
926273d9f13SBarry Smith {
927273d9f13SBarry Smith   PetscFunctionBegin;
9289566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->rmap));
9299566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->cmap));
93018992e5dSStefano Zampini   if (!A->preallocated) {
9319566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(A,NULL));
93218992e5dSStefano Zampini   }
933273d9f13SBarry Smith   PetscFunctionReturn(0);
934273d9f13SBarry Smith }
935273d9f13SBarry Smith 
936488007eeSBarry Smith PetscErrorCode MatAXPY_MPIDense(Mat Y,PetscScalar alpha,Mat X,MatStructure str)
937488007eeSBarry Smith {
938488007eeSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)Y->data, *B = (Mat_MPIDense*)X->data;
939488007eeSBarry Smith 
940488007eeSBarry Smith   PetscFunctionBegin;
9419566063dSJacob Faibussowitsch   PetscCall(MatAXPY(A->A,alpha,B->A,str));
942488007eeSBarry Smith   PetscFunctionReturn(0);
943488007eeSBarry Smith }
944488007eeSBarry Smith 
9457087cfbeSBarry Smith PetscErrorCode MatConjugate_MPIDense(Mat mat)
946ba337c44SJed Brown {
947ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
948ba337c44SJed Brown 
949ba337c44SJed Brown   PetscFunctionBegin;
9509566063dSJacob Faibussowitsch   PetscCall(MatConjugate(a->A));
951ba337c44SJed Brown   PetscFunctionReturn(0);
952ba337c44SJed Brown }
953ba337c44SJed Brown 
954ba337c44SJed Brown PetscErrorCode MatRealPart_MPIDense(Mat A)
955ba337c44SJed Brown {
956ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
957ba337c44SJed Brown 
958ba337c44SJed Brown   PetscFunctionBegin;
9599566063dSJacob Faibussowitsch   PetscCall(MatRealPart(a->A));
960ba337c44SJed Brown   PetscFunctionReturn(0);
961ba337c44SJed Brown }
962ba337c44SJed Brown 
963ba337c44SJed Brown PetscErrorCode MatImaginaryPart_MPIDense(Mat A)
964ba337c44SJed Brown {
965ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
966ba337c44SJed Brown 
967ba337c44SJed Brown   PetscFunctionBegin;
9689566063dSJacob Faibussowitsch   PetscCall(MatImaginaryPart(a->A));
969ba337c44SJed Brown   PetscFunctionReturn(0);
970ba337c44SJed Brown }
971ba337c44SJed Brown 
97249a6ff4bSBarry Smith static PetscErrorCode MatGetColumnVector_MPIDense(Mat A,Vec v,PetscInt col)
97349a6ff4bSBarry Smith {
974637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
97549a6ff4bSBarry Smith 
97649a6ff4bSBarry Smith   PetscFunctionBegin;
97728b400f6SJacob Faibussowitsch   PetscCheck(a->A,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing local matrix");
97828b400f6SJacob Faibussowitsch   PetscCheck(a->A->ops->getcolumnvector,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing get column operation");
9799566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->getcolumnvector)(a->A,v,col));
98049a6ff4bSBarry Smith   PetscFunctionReturn(0);
98149a6ff4bSBarry Smith }
98249a6ff4bSBarry Smith 
983857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat,PetscInt,PetscReal*);
98452c5f739Sprj- 
985857cbf51SRichard Tran Mills PetscErrorCode MatGetColumnReductions_MPIDense(Mat A,PetscInt type,PetscReal *reductions)
9860716a85fSBarry Smith {
987a873a8cdSSam Reynolds   PetscInt       i,m,n;
9880716a85fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
9890716a85fSBarry Smith   PetscReal      *work;
9900716a85fSBarry Smith 
9910716a85fSBarry Smith   PetscFunctionBegin;
9929566063dSJacob Faibussowitsch   PetscCall(MatGetSize(A,&m,&n));
9939566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(n,&work));
994857cbf51SRichard Tran Mills   if (type == REDUCTION_MEAN_REALPART) {
9959566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A,(PetscInt)REDUCTION_SUM_REALPART,work));
996857cbf51SRichard Tran Mills   } else if (type == REDUCTION_MEAN_IMAGINARYPART) {
9979566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A,(PetscInt)REDUCTION_SUM_IMAGINARYPART,work));
998a873a8cdSSam Reynolds   } else {
9999566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A,type,work));
1000a873a8cdSSam Reynolds   }
1001857cbf51SRichard Tran Mills   if (type == NORM_2) {
10020716a85fSBarry Smith     for (i=0; i<n; i++) work[i] *= work[i];
10030716a85fSBarry Smith   }
1004857cbf51SRichard Tran Mills   if (type == NORM_INFINITY) {
10051c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(work,reductions,n,MPIU_REAL,MPIU_MAX,A->hdr.comm));
10060716a85fSBarry Smith   } else {
10071c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(work,reductions,n,MPIU_REAL,MPIU_SUM,A->hdr.comm));
10080716a85fSBarry Smith   }
10099566063dSJacob Faibussowitsch   PetscCall(PetscFree(work));
1010857cbf51SRichard Tran Mills   if (type == NORM_2) {
1011a873a8cdSSam Reynolds     for (i=0; i<n; i++) reductions[i] = PetscSqrtReal(reductions[i]);
1012857cbf51SRichard Tran Mills   } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) {
1013a873a8cdSSam Reynolds     for (i=0; i<n; i++) reductions[i] /= m;
10140716a85fSBarry Smith   }
10150716a85fSBarry Smith   PetscFunctionReturn(0);
10160716a85fSBarry Smith }
10170716a85fSBarry Smith 
1018637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
10196947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10206947451fSStefano Zampini {
10216947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10226947451fSStefano Zampini   PetscInt       lda;
10236947451fSStefano Zampini 
10246947451fSStefano Zampini   PetscFunctionBegin;
102528b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
102628b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10276947451fSStefano Zampini   if (!a->cvec) {
10289566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
10299566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
10306947451fSStefano Zampini   }
10316947451fSStefano Zampini   a->vecinuse = col + 1;
10329566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
10339566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArray(a->A,(PetscScalar**)&a->ptrinuse));
10349566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
10356947451fSStefano Zampini   *v   = a->cvec;
10366947451fSStefano Zampini   PetscFunctionReturn(0);
10376947451fSStefano Zampini }
10386947451fSStefano Zampini 
10396947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10406947451fSStefano Zampini {
10416947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10426947451fSStefano Zampini 
10436947451fSStefano Zampini   PetscFunctionBegin;
104428b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
104528b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
10466947451fSStefano Zampini   a->vecinuse = 0;
10479566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArray(a->A,(PetscScalar**)&a->ptrinuse));
10489566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
10496947451fSStefano Zampini   *v   = NULL;
10506947451fSStefano Zampini   PetscFunctionReturn(0);
10516947451fSStefano Zampini }
10526947451fSStefano Zampini 
10536947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10546947451fSStefano Zampini {
10556947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10566947451fSStefano Zampini   PetscInt       lda;
10576947451fSStefano Zampini 
10586947451fSStefano Zampini   PetscFunctionBegin;
105928b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
106028b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10616947451fSStefano Zampini   if (!a->cvec) {
10629566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
10639566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
10646947451fSStefano Zampini   }
10656947451fSStefano Zampini   a->vecinuse = col + 1;
10669566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
10679566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayRead(a->A,&a->ptrinuse));
10689566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
10699566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(a->cvec));
10706947451fSStefano Zampini   *v   = a->cvec;
10716947451fSStefano Zampini   PetscFunctionReturn(0);
10726947451fSStefano Zampini }
10736947451fSStefano Zampini 
10746947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10756947451fSStefano Zampini {
10766947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10776947451fSStefano Zampini 
10786947451fSStefano Zampini   PetscFunctionBegin;
107928b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
108028b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
10816947451fSStefano Zampini   a->vecinuse = 0;
10829566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayRead(a->A,&a->ptrinuse));
10839566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(a->cvec));
10849566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
10856947451fSStefano Zampini   *v   = NULL;
10866947451fSStefano Zampini   PetscFunctionReturn(0);
10876947451fSStefano Zampini }
10886947451fSStefano Zampini 
10896947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10906947451fSStefano Zampini {
10916947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10926947451fSStefano Zampini   PetscInt       lda;
10936947451fSStefano Zampini 
10946947451fSStefano Zampini   PetscFunctionBegin;
109528b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
109628b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10976947451fSStefano Zampini   if (!a->cvec) {
10989566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
10999566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec));
11006947451fSStefano Zampini   }
11016947451fSStefano Zampini   a->vecinuse = col + 1;
11029566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
11039566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
11049566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
11056947451fSStefano Zampini   *v   = a->cvec;
11066947451fSStefano Zampini   PetscFunctionReturn(0);
11076947451fSStefano Zampini }
11086947451fSStefano Zampini 
11096947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11106947451fSStefano Zampini {
11116947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11126947451fSStefano Zampini 
11136947451fSStefano Zampini   PetscFunctionBegin;
111428b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
111528b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
11166947451fSStefano Zampini   a->vecinuse = 0;
11179566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
11189566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
11196947451fSStefano Zampini   *v   = NULL;
11206947451fSStefano Zampini   PetscFunctionReturn(0);
11216947451fSStefano Zampini }
11226947451fSStefano Zampini 
1123637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAPlaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1124637a0070SStefano Zampini {
1125637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1126637a0070SStefano Zampini 
1127637a0070SStefano Zampini   PetscFunctionBegin;
112828b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
112928b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11309566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAPlaceArray(l->A,a));
1131637a0070SStefano Zampini   PetscFunctionReturn(0);
1132637a0070SStefano Zampini }
1133637a0070SStefano Zampini 
1134637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAResetArray_MPIDenseCUDA(Mat A)
1135637a0070SStefano Zampini {
1136637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1137637a0070SStefano Zampini 
1138637a0070SStefano Zampini   PetscFunctionBegin;
113928b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
114028b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11419566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAResetArray(l->A));
1142637a0070SStefano Zampini   PetscFunctionReturn(0);
1143637a0070SStefano Zampini }
1144637a0070SStefano Zampini 
1145d5ea218eSStefano Zampini static PetscErrorCode MatDenseCUDAReplaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1146d5ea218eSStefano Zampini {
1147d5ea218eSStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1148d5ea218eSStefano Zampini 
1149d5ea218eSStefano Zampini   PetscFunctionBegin;
115028b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
115128b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11529566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAReplaceArray(l->A,a));
1153d5ea218eSStefano Zampini   PetscFunctionReturn(0);
1154d5ea218eSStefano Zampini }
1155d5ea218eSStefano Zampini 
1156637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1157637a0070SStefano Zampini {
1158637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1159637a0070SStefano Zampini 
1160637a0070SStefano Zampini   PetscFunctionBegin;
11619566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayWrite(l->A,a));
1162637a0070SStefano Zampini   PetscFunctionReturn(0);
1163637a0070SStefano Zampini }
1164637a0070SStefano Zampini 
1165637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1166637a0070SStefano Zampini {
1167637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1168637a0070SStefano Zampini 
1169637a0070SStefano Zampini   PetscFunctionBegin;
11709566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayWrite(l->A,a));
1171637a0070SStefano Zampini   PetscFunctionReturn(0);
1172637a0070SStefano Zampini }
1173637a0070SStefano Zampini 
1174637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1175637a0070SStefano Zampini {
1176637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1177637a0070SStefano Zampini 
1178637a0070SStefano Zampini   PetscFunctionBegin;
11799566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayRead(l->A,a));
1180637a0070SStefano Zampini   PetscFunctionReturn(0);
1181637a0070SStefano Zampini }
1182637a0070SStefano Zampini 
1183637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1184637a0070SStefano Zampini {
1185637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1186637a0070SStefano Zampini 
1187637a0070SStefano Zampini   PetscFunctionBegin;
11889566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayRead(l->A,a));
1189637a0070SStefano Zampini   PetscFunctionReturn(0);
1190637a0070SStefano Zampini }
1191637a0070SStefano Zampini 
1192637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1193637a0070SStefano Zampini {
1194637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1195637a0070SStefano Zampini 
1196637a0070SStefano Zampini   PetscFunctionBegin;
11979566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArray(l->A,a));
1198637a0070SStefano Zampini   PetscFunctionReturn(0);
1199637a0070SStefano Zampini }
1200637a0070SStefano Zampini 
1201637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1202637a0070SStefano Zampini {
1203637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1204637a0070SStefano Zampini 
1205637a0070SStefano Zampini   PetscFunctionBegin;
12069566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArray(l->A,a));
1207637a0070SStefano Zampini   PetscFunctionReturn(0);
1208637a0070SStefano Zampini }
1209637a0070SStefano Zampini 
12106947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12116947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12126947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat,PetscInt,Vec*);
12136947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12146947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12156947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat,PetscInt,Vec*);
12165ea7661aSPierre Jolivet static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat,Mat*);
12176947451fSStefano Zampini 
1218637a0070SStefano Zampini static PetscErrorCode MatBindToCPU_MPIDenseCUDA(Mat mat,PetscBool bind)
1219637a0070SStefano Zampini {
1220637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)mat->data;
1221637a0070SStefano Zampini 
1222637a0070SStefano Zampini   PetscFunctionBegin;
122328b400f6SJacob Faibussowitsch   PetscCheck(!d->vecinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
122428b400f6SJacob Faibussowitsch   PetscCheck(!d->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1225637a0070SStefano Zampini   if (d->A) {
12269566063dSJacob Faibussowitsch     PetscCall(MatBindToCPU(d->A,bind));
1227637a0070SStefano Zampini   }
1228637a0070SStefano Zampini   mat->boundtocpu = bind;
12296947451fSStefano Zampini   if (!bind) {
12306947451fSStefano Zampini     PetscBool iscuda;
12316947451fSStefano Zampini 
12329566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)d->cvec,VECMPICUDA,&iscuda));
12336947451fSStefano Zampini     if (!iscuda) {
12349566063dSJacob Faibussowitsch       PetscCall(VecDestroy(&d->cvec));
1235616b8fbbSStefano Zampini     }
12369566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)d->cmat,MATMPIDENSECUDA,&iscuda));
1237616b8fbbSStefano Zampini     if (!iscuda) {
12389566063dSJacob Faibussowitsch       PetscCall(MatDestroy(&d->cmat));
12396947451fSStefano Zampini     }
12409566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDenseCUDA));
12419566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDenseCUDA));
12429566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDenseCUDA));
12439566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDenseCUDA));
12449566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDenseCUDA));
12459566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDenseCUDA));
12466947451fSStefano Zampini   } else {
12479566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense));
12489566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense));
12499566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense));
12509566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense));
12519566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense));
12529566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense));
1253616b8fbbSStefano Zampini   }
1254616b8fbbSStefano Zampini   if (d->cmat) {
12559566063dSJacob Faibussowitsch     PetscCall(MatBindToCPU(d->cmat,bind));
12566947451fSStefano Zampini   }
1257637a0070SStefano Zampini   PetscFunctionReturn(0);
1258637a0070SStefano Zampini }
1259637a0070SStefano Zampini 
1260637a0070SStefano Zampini PetscErrorCode MatMPIDenseCUDASetPreallocation(Mat A, PetscScalar *d_data)
1261637a0070SStefano Zampini {
1262637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)A->data;
1263637a0070SStefano Zampini   PetscBool      iscuda;
1264637a0070SStefano Zampini 
1265637a0070SStefano Zampini   PetscFunctionBegin;
1266d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
12679566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda));
1268637a0070SStefano Zampini   if (!iscuda) PetscFunctionReturn(0);
12699566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->rmap));
12709566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->cmap));
1271637a0070SStefano Zampini   if (!d->A) {
12729566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF,&d->A));
12739566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)d->A));
12749566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(d->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N));
1275637a0070SStefano Zampini   }
12769566063dSJacob Faibussowitsch   PetscCall(MatSetType(d->A,MATSEQDENSECUDA));
12779566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseCUDASetPreallocation(d->A,d_data));
1278637a0070SStefano Zampini   A->preallocated = PETSC_TRUE;
1279*6f08ad05SPierre Jolivet   A->assembled = PETSC_TRUE;
1280637a0070SStefano Zampini   PetscFunctionReturn(0);
1281637a0070SStefano Zampini }
1282637a0070SStefano Zampini #endif
1283637a0070SStefano Zampini 
128473a71a0fSBarry Smith static PetscErrorCode MatSetRandom_MPIDense(Mat x,PetscRandom rctx)
128573a71a0fSBarry Smith {
128673a71a0fSBarry Smith   Mat_MPIDense   *d = (Mat_MPIDense*)x->data;
128773a71a0fSBarry Smith 
128873a71a0fSBarry Smith   PetscFunctionBegin;
12899566063dSJacob Faibussowitsch   PetscCall(MatSetRandom(d->A,rctx));
129073a71a0fSBarry Smith   PetscFunctionReturn(0);
129173a71a0fSBarry Smith }
129273a71a0fSBarry Smith 
12933b49f96aSBarry Smith static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A,PetscBool  *missing,PetscInt *d)
12943b49f96aSBarry Smith {
12953b49f96aSBarry Smith   PetscFunctionBegin;
12963b49f96aSBarry Smith   *missing = PETSC_FALSE;
12973b49f96aSBarry Smith   PetscFunctionReturn(0);
12983b49f96aSBarry Smith }
12993b49f96aSBarry Smith 
13004222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1301cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13026718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1303a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13046718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat,Mat,PetscBool*);
13056718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat,PetscViewer);
1306cc48ffa7SToby Isaac 
13078965ea79SLois Curfman McInnes /* -------------------------------------------------------------------*/
130809dc0095SBarry Smith static struct _MatOps MatOps_Values = { MatSetValues_MPIDense,
130909dc0095SBarry Smith                                         MatGetRow_MPIDense,
131009dc0095SBarry Smith                                         MatRestoreRow_MPIDense,
131109dc0095SBarry Smith                                         MatMult_MPIDense,
131297304618SKris Buschelman                                 /*  4*/ MatMultAdd_MPIDense,
13137c922b88SBarry Smith                                         MatMultTranspose_MPIDense,
13147c922b88SBarry Smith                                         MatMultTransposeAdd_MPIDense,
1315f4259b30SLisandro Dalcin                                         NULL,
1316f4259b30SLisandro Dalcin                                         NULL,
1317f4259b30SLisandro Dalcin                                         NULL,
1318f4259b30SLisandro Dalcin                                 /* 10*/ NULL,
1319f4259b30SLisandro Dalcin                                         NULL,
1320f4259b30SLisandro Dalcin                                         NULL,
1321f4259b30SLisandro Dalcin                                         NULL,
132209dc0095SBarry Smith                                         MatTranspose_MPIDense,
132397304618SKris Buschelman                                 /* 15*/ MatGetInfo_MPIDense,
13246e4ee0c6SHong Zhang                                         MatEqual_MPIDense,
132509dc0095SBarry Smith                                         MatGetDiagonal_MPIDense,
13265b2fa520SLois Curfman McInnes                                         MatDiagonalScale_MPIDense,
132709dc0095SBarry Smith                                         MatNorm_MPIDense,
132897304618SKris Buschelman                                 /* 20*/ MatAssemblyBegin_MPIDense,
132909dc0095SBarry Smith                                         MatAssemblyEnd_MPIDense,
133009dc0095SBarry Smith                                         MatSetOption_MPIDense,
133109dc0095SBarry Smith                                         MatZeroEntries_MPIDense,
1332d519adbfSMatthew Knepley                                 /* 24*/ MatZeroRows_MPIDense,
1333f4259b30SLisandro Dalcin                                         NULL,
1334f4259b30SLisandro Dalcin                                         NULL,
1335f4259b30SLisandro Dalcin                                         NULL,
1336f4259b30SLisandro Dalcin                                         NULL,
13374994cf47SJed Brown                                 /* 29*/ MatSetUp_MPIDense,
1338f4259b30SLisandro Dalcin                                         NULL,
1339f4259b30SLisandro Dalcin                                         NULL,
1340c56a70eeSBarry Smith                                         MatGetDiagonalBlock_MPIDense,
1341f4259b30SLisandro Dalcin                                         NULL,
1342d519adbfSMatthew Knepley                                 /* 34*/ MatDuplicate_MPIDense,
1343f4259b30SLisandro Dalcin                                         NULL,
1344f4259b30SLisandro Dalcin                                         NULL,
1345f4259b30SLisandro Dalcin                                         NULL,
1346f4259b30SLisandro Dalcin                                         NULL,
1347d519adbfSMatthew Knepley                                 /* 39*/ MatAXPY_MPIDense,
13487dae84e0SHong Zhang                                         MatCreateSubMatrices_MPIDense,
1349f4259b30SLisandro Dalcin                                         NULL,
135009dc0095SBarry Smith                                         MatGetValues_MPIDense,
1351a76f77c3SStefano Zampini                                         MatCopy_MPIDense,
1352f4259b30SLisandro Dalcin                                 /* 44*/ NULL,
135309dc0095SBarry Smith                                         MatScale_MPIDense,
13547d68702bSBarry Smith                                         MatShift_Basic,
1355f4259b30SLisandro Dalcin                                         NULL,
1356f4259b30SLisandro Dalcin                                         NULL,
135773a71a0fSBarry Smith                                 /* 49*/ MatSetRandom_MPIDense,
1358f4259b30SLisandro Dalcin                                         NULL,
1359f4259b30SLisandro Dalcin                                         NULL,
1360f4259b30SLisandro Dalcin                                         NULL,
1361f4259b30SLisandro Dalcin                                         NULL,
1362f4259b30SLisandro Dalcin                                 /* 54*/ NULL,
1363f4259b30SLisandro Dalcin                                         NULL,
1364f4259b30SLisandro Dalcin                                         NULL,
1365f4259b30SLisandro Dalcin                                         NULL,
1366f4259b30SLisandro Dalcin                                         NULL,
13677dae84e0SHong Zhang                                 /* 59*/ MatCreateSubMatrix_MPIDense,
1368b9b97703SBarry Smith                                         MatDestroy_MPIDense,
1369b9b97703SBarry Smith                                         MatView_MPIDense,
1370f4259b30SLisandro Dalcin                                         NULL,
1371f4259b30SLisandro Dalcin                                         NULL,
1372f4259b30SLisandro Dalcin                                 /* 64*/ NULL,
1373f4259b30SLisandro Dalcin                                         NULL,
1374f4259b30SLisandro Dalcin                                         NULL,
1375f4259b30SLisandro Dalcin                                         NULL,
1376f4259b30SLisandro Dalcin                                         NULL,
1377f4259b30SLisandro Dalcin                                 /* 69*/ NULL,
1378f4259b30SLisandro Dalcin                                         NULL,
1379f4259b30SLisandro Dalcin                                         NULL,
1380f4259b30SLisandro Dalcin                                         NULL,
1381f4259b30SLisandro Dalcin                                         NULL,
1382f4259b30SLisandro Dalcin                                 /* 74*/ NULL,
1383f4259b30SLisandro Dalcin                                         NULL,
1384f4259b30SLisandro Dalcin                                         NULL,
1385f4259b30SLisandro Dalcin                                         NULL,
1386f4259b30SLisandro Dalcin                                         NULL,
1387f4259b30SLisandro Dalcin                                 /* 79*/ NULL,
1388f4259b30SLisandro Dalcin                                         NULL,
1389f4259b30SLisandro Dalcin                                         NULL,
1390f4259b30SLisandro Dalcin                                         NULL,
13915bba2384SShri Abhyankar                                 /* 83*/ MatLoad_MPIDense,
1392f4259b30SLisandro Dalcin                                         NULL,
1393f4259b30SLisandro Dalcin                                         NULL,
1394f4259b30SLisandro Dalcin                                         NULL,
1395f4259b30SLisandro Dalcin                                         NULL,
1396f4259b30SLisandro Dalcin                                         NULL,
1397f4259b30SLisandro Dalcin                                 /* 89*/ NULL,
1398f4259b30SLisandro Dalcin                                         NULL,
1399f4259b30SLisandro Dalcin                                         NULL,
1400f4259b30SLisandro Dalcin                                         NULL,
1401f4259b30SLisandro Dalcin                                         NULL,
1402f4259b30SLisandro Dalcin                                 /* 94*/ NULL,
1403f4259b30SLisandro Dalcin                                         NULL,
14046718818eSStefano Zampini                                         MatMatTransposeMultSymbolic_MPIDense_MPIDense,
1405cc48ffa7SToby Isaac                                         MatMatTransposeMultNumeric_MPIDense_MPIDense,
1406f4259b30SLisandro Dalcin                                         NULL,
14074222ddf1SHong Zhang                                 /* 99*/ MatProductSetFromOptions_MPIDense,
1408f4259b30SLisandro Dalcin                                         NULL,
1409f4259b30SLisandro Dalcin                                         NULL,
1410ba337c44SJed Brown                                         MatConjugate_MPIDense,
1411f4259b30SLisandro Dalcin                                         NULL,
1412f4259b30SLisandro Dalcin                                 /*104*/ NULL,
1413ba337c44SJed Brown                                         MatRealPart_MPIDense,
1414ba337c44SJed Brown                                         MatImaginaryPart_MPIDense,
1415f4259b30SLisandro Dalcin                                         NULL,
1416f4259b30SLisandro Dalcin                                         NULL,
1417f4259b30SLisandro Dalcin                                 /*109*/ NULL,
1418f4259b30SLisandro Dalcin                                         NULL,
1419f4259b30SLisandro Dalcin                                         NULL,
142049a6ff4bSBarry Smith                                         MatGetColumnVector_MPIDense,
14213b49f96aSBarry Smith                                         MatMissingDiagonal_MPIDense,
1422f4259b30SLisandro Dalcin                                 /*114*/ NULL,
1423f4259b30SLisandro Dalcin                                         NULL,
1424f4259b30SLisandro Dalcin                                         NULL,
1425f4259b30SLisandro Dalcin                                         NULL,
1426f4259b30SLisandro Dalcin                                         NULL,
1427f4259b30SLisandro Dalcin                                 /*119*/ NULL,
1428f4259b30SLisandro Dalcin                                         NULL,
1429f4259b30SLisandro Dalcin                                         NULL,
1430f4259b30SLisandro Dalcin                                         NULL,
1431f4259b30SLisandro Dalcin                                         NULL,
1432f4259b30SLisandro Dalcin                                 /*124*/ NULL,
1433a873a8cdSSam Reynolds                                         MatGetColumnReductions_MPIDense,
1434f4259b30SLisandro Dalcin                                         NULL,
1435f4259b30SLisandro Dalcin                                         NULL,
1436f4259b30SLisandro Dalcin                                         NULL,
1437f4259b30SLisandro Dalcin                                 /*129*/ NULL,
1438f4259b30SLisandro Dalcin                                         NULL,
14396718818eSStefano Zampini                                         MatTransposeMatMultSymbolic_MPIDense_MPIDense,
1440cb20be35SHong Zhang                                         MatTransposeMatMultNumeric_MPIDense_MPIDense,
1441f4259b30SLisandro Dalcin                                         NULL,
1442f4259b30SLisandro Dalcin                                 /*134*/ NULL,
1443f4259b30SLisandro Dalcin                                         NULL,
1444f4259b30SLisandro Dalcin                                         NULL,
1445f4259b30SLisandro Dalcin                                         NULL,
1446f4259b30SLisandro Dalcin                                         NULL,
1447f4259b30SLisandro Dalcin                                 /*139*/ NULL,
1448f4259b30SLisandro Dalcin                                         NULL,
1449f4259b30SLisandro Dalcin                                         NULL,
1450f4259b30SLisandro Dalcin                                         NULL,
1451f4259b30SLisandro Dalcin                                         NULL,
14524222ddf1SHong Zhang                                         MatCreateMPIMatConcatenateSeqMat_MPIDense,
1453f4259b30SLisandro Dalcin                                 /*145*/ NULL,
1454f4259b30SLisandro Dalcin                                         NULL,
1455f4259b30SLisandro Dalcin                                         NULL
1456ba337c44SJed Brown };
14578965ea79SLois Curfman McInnes 
14587087cfbeSBarry Smith PetscErrorCode  MatMPIDenseSetPreallocation_MPIDense(Mat mat,PetscScalar *data)
1459a23d5eceSKris Buschelman {
1460637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
1461637a0070SStefano Zampini   PetscBool      iscuda;
1462a23d5eceSKris Buschelman 
1463a23d5eceSKris Buschelman   PetscFunctionBegin;
146428b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
14659566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(mat->rmap));
14669566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(mat->cmap));
1467637a0070SStefano Zampini   if (!a->A) {
14689566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF,&a->A));
14699566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A));
14709566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(a->A,mat->rmap->n,mat->cmap->N,mat->rmap->n,mat->cmap->N));
1471637a0070SStefano Zampini   }
14729566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)mat,MATMPIDENSECUDA,&iscuda));
14739566063dSJacob Faibussowitsch   PetscCall(MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE));
14749566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseSetPreallocation(a->A,data));
1475637a0070SStefano Zampini   mat->preallocated = PETSC_TRUE;
1476*6f08ad05SPierre Jolivet   mat->assembled = PETSC_TRUE;
1477a23d5eceSKris Buschelman   PetscFunctionReturn(0);
1478a23d5eceSKris Buschelman }
1479a23d5eceSKris Buschelman 
14804e29119aSPierre Jolivet PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
14814e29119aSPierre Jolivet {
14824e29119aSPierre Jolivet   Mat            B,C;
14834e29119aSPierre Jolivet 
14844e29119aSPierre Jolivet   PetscFunctionBegin;
14859566063dSJacob Faibussowitsch   PetscCall(MatMPIAIJGetLocalMat(A,MAT_INITIAL_MATRIX,&C));
14869566063dSJacob Faibussowitsch   PetscCall(MatConvert_SeqAIJ_SeqDense(C,MATSEQDENSE,MAT_INITIAL_MATRIX,&B));
14879566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&C));
14884e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
14894e29119aSPierre Jolivet     C = *newmat;
14904e29119aSPierre Jolivet   } else C = NULL;
14919566063dSJacob Faibussowitsch   PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A),B,A->cmap->n,!C?MAT_INITIAL_MATRIX:MAT_REUSE_MATRIX,&C));
14929566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&B));
14934e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
14949566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A,&C));
14954e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
14964e29119aSPierre Jolivet   PetscFunctionReturn(0);
14974e29119aSPierre Jolivet }
14984e29119aSPierre Jolivet 
14994e29119aSPierre Jolivet PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15004e29119aSPierre Jolivet {
15014e29119aSPierre Jolivet   Mat            B,C;
15024e29119aSPierre Jolivet 
15034e29119aSPierre Jolivet   PetscFunctionBegin;
15049566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLocalMatrix(A,&C));
15059566063dSJacob Faibussowitsch   PetscCall(MatConvert_SeqDense_SeqAIJ(C,MATSEQAIJ,MAT_INITIAL_MATRIX,&B));
15064e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
15074e29119aSPierre Jolivet     C = *newmat;
15084e29119aSPierre Jolivet   } else C = NULL;
15099566063dSJacob Faibussowitsch   PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A),B,A->cmap->n,!C?MAT_INITIAL_MATRIX:MAT_REUSE_MATRIX,&C));
15109566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&B));
15114e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
15129566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A,&C));
15134e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
15144e29119aSPierre Jolivet   PetscFunctionReturn(0);
15154e29119aSPierre Jolivet }
15164e29119aSPierre Jolivet 
151765b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
1518cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15198baccfbdSHong Zhang {
15208ea901baSHong Zhang   Mat            mat_elemental;
152132d7a744SHong Zhang   PetscScalar    *v;
152232d7a744SHong Zhang   PetscInt       m=A->rmap->n,N=A->cmap->N,rstart=A->rmap->rstart,i,*rows,*cols;
15238ea901baSHong Zhang 
15248baccfbdSHong Zhang   PetscFunctionBegin;
1525378336b6SHong Zhang   if (reuse == MAT_REUSE_MATRIX) {
1526378336b6SHong Zhang     mat_elemental = *newmat;
15279566063dSJacob Faibussowitsch     PetscCall(MatZeroEntries(*newmat));
1528378336b6SHong Zhang   } else {
15299566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental));
15309566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(mat_elemental,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N));
15319566063dSJacob Faibussowitsch     PetscCall(MatSetType(mat_elemental,MATELEMENTAL));
15329566063dSJacob Faibussowitsch     PetscCall(MatSetUp(mat_elemental));
15339566063dSJacob Faibussowitsch     PetscCall(MatSetOption(mat_elemental,MAT_ROW_ORIENTED,PETSC_FALSE));
1534378336b6SHong Zhang   }
1535378336b6SHong Zhang 
15369566063dSJacob Faibussowitsch   PetscCall(PetscMalloc2(m,&rows,N,&cols));
153732d7a744SHong Zhang   for (i=0; i<N; i++) cols[i] = i;
153832d7a744SHong Zhang   for (i=0; i<m; i++) rows[i] = rstart + i;
15398ea901baSHong Zhang 
1540637a0070SStefano Zampini   /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */
15419566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(A,&v));
15429566063dSJacob Faibussowitsch   PetscCall(MatSetValues(mat_elemental,m,rows,N,cols,v,ADD_VALUES));
15439566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY));
15449566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY));
15459566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(A,&v));
15469566063dSJacob Faibussowitsch   PetscCall(PetscFree2(rows,cols));
15478ea901baSHong Zhang 
1548511c6705SHong Zhang   if (reuse == MAT_INPLACE_MATRIX) {
15499566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A,&mat_elemental));
15508ea901baSHong Zhang   } else {
15518ea901baSHong Zhang     *newmat = mat_elemental;
15528ea901baSHong Zhang   }
15538baccfbdSHong Zhang   PetscFunctionReturn(0);
15548baccfbdSHong Zhang }
155565b80a83SHong Zhang #endif
15568baccfbdSHong Zhang 
1557af53bab2SHong Zhang static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A,PetscInt col,PetscScalar **vals)
155886aefd0dSHong Zhang {
155986aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
156086aefd0dSHong Zhang 
156186aefd0dSHong Zhang   PetscFunctionBegin;
15629566063dSJacob Faibussowitsch   PetscCall(MatDenseGetColumn(mat->A,col,vals));
156386aefd0dSHong Zhang   PetscFunctionReturn(0);
156486aefd0dSHong Zhang }
156586aefd0dSHong Zhang 
1566af53bab2SHong Zhang static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A,PetscScalar **vals)
156786aefd0dSHong Zhang {
156886aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
156986aefd0dSHong Zhang 
157086aefd0dSHong Zhang   PetscFunctionBegin;
15719566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreColumn(mat->A,vals));
157286aefd0dSHong Zhang   PetscFunctionReturn(0);
157386aefd0dSHong Zhang }
157486aefd0dSHong Zhang 
157594e2cb23SJakub Kruzik PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm,Mat inmat,PetscInt n,MatReuse scall,Mat *outmat)
157694e2cb23SJakub Kruzik {
157794e2cb23SJakub Kruzik   Mat_MPIDense   *mat;
157894e2cb23SJakub Kruzik   PetscInt       m,nloc,N;
157994e2cb23SJakub Kruzik 
158094e2cb23SJakub Kruzik   PetscFunctionBegin;
15819566063dSJacob Faibussowitsch   PetscCall(MatGetSize(inmat,&m,&N));
15829566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(inmat,NULL,&nloc));
158394e2cb23SJakub Kruzik   if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */
158494e2cb23SJakub Kruzik     PetscInt sum;
158594e2cb23SJakub Kruzik 
158694e2cb23SJakub Kruzik     if (n == PETSC_DECIDE) {
15879566063dSJacob Faibussowitsch       PetscCall(PetscSplitOwnership(comm,&n,&N));
158894e2cb23SJakub Kruzik     }
158994e2cb23SJakub Kruzik     /* Check sum(n) = N */
15901c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(&n,&sum,1,MPIU_INT,MPI_SUM,comm));
159108401ef6SPierre Jolivet     PetscCheck(sum == N,PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT,sum,N);
159294e2cb23SJakub Kruzik 
15939566063dSJacob Faibussowitsch     PetscCall(MatCreateDense(comm,m,n,PETSC_DETERMINE,N,NULL,outmat));
15949566063dSJacob Faibussowitsch     PetscCall(MatSetOption(*outmat,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE));
159594e2cb23SJakub Kruzik   }
159694e2cb23SJakub Kruzik 
159794e2cb23SJakub Kruzik   /* numeric phase */
159894e2cb23SJakub Kruzik   mat = (Mat_MPIDense*)(*outmat)->data;
15999566063dSJacob Faibussowitsch   PetscCall(MatCopy(inmat,mat->A,SAME_NONZERO_PATTERN));
16009566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(*outmat,MAT_FINAL_ASSEMBLY));
16019566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(*outmat,MAT_FINAL_ASSEMBLY));
160294e2cb23SJakub Kruzik   PetscFunctionReturn(0);
160394e2cb23SJakub Kruzik }
160494e2cb23SJakub Kruzik 
1605637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1606637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDenseCUDA_MPIDense(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1607637a0070SStefano Zampini {
1608637a0070SStefano Zampini   Mat            B;
1609637a0070SStefano Zampini   Mat_MPIDense   *m;
1610637a0070SStefano Zampini 
1611637a0070SStefano Zampini   PetscFunctionBegin;
1612637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
16139566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(M,MAT_COPY_VALUES,newmat));
1614637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
16159566063dSJacob Faibussowitsch     PetscCall(MatCopy(M,*newmat,SAME_NONZERO_PATTERN));
1616637a0070SStefano Zampini   }
1617637a0070SStefano Zampini 
1618637a0070SStefano Zampini   B    = *newmat;
16199566063dSJacob Faibussowitsch   PetscCall(MatBindToCPU_MPIDenseCUDA(B,PETSC_TRUE));
16209566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->defaultvectype));
16219566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(VECSTANDARD,&B->defaultvectype));
16229566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSE));
16239566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",NULL));
16249566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",NULL));
16259566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",NULL));
16269566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",NULL));
16279566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",NULL));
16289566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",NULL));
16299566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",NULL));
16309566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",NULL));
16319566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",NULL));
16329566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",NULL));
16339566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",NULL));
16349566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",NULL));
16359566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",NULL));
16369566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",NULL));
1637637a0070SStefano Zampini   m    = (Mat_MPIDense*)(B)->data;
1638637a0070SStefano Zampini   if (m->A) {
16399566063dSJacob Faibussowitsch     PetscCall(MatConvert(m->A,MATSEQDENSE,MAT_INPLACE_MATRIX,&m->A));
1640637a0070SStefano Zampini   }
1641637a0070SStefano Zampini   B->ops->bindtocpu = NULL;
1642637a0070SStefano Zampini   B->offloadmask    = PETSC_OFFLOAD_CPU;
1643637a0070SStefano Zampini   PetscFunctionReturn(0);
1644637a0070SStefano Zampini }
1645637a0070SStefano Zampini 
1646637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDense_MPIDenseCUDA(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1647637a0070SStefano Zampini {
1648637a0070SStefano Zampini   Mat            B;
1649637a0070SStefano Zampini   Mat_MPIDense   *m;
1650637a0070SStefano Zampini 
1651637a0070SStefano Zampini   PetscFunctionBegin;
1652637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
16539566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(M,MAT_COPY_VALUES,newmat));
1654637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
16559566063dSJacob Faibussowitsch     PetscCall(MatCopy(M,*newmat,SAME_NONZERO_PATTERN));
1656637a0070SStefano Zampini   }
1657637a0070SStefano Zampini 
1658637a0070SStefano Zampini   B    = *newmat;
16599566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->defaultvectype));
16609566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(VECCUDA,&B->defaultvectype));
16619566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSECUDA));
16629566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",                    MatConvert_MPIDenseCUDA_MPIDense));
16639566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",        MatProductSetFromOptions_MPIAIJ_MPIDense));
16649566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
16659566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",        MatProductSetFromOptions_MPIDense_MPIAIJ));
16669566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
16679566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",                                MatDenseCUDAGetArray_MPIDenseCUDA));
16689566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",                            MatDenseCUDAGetArrayRead_MPIDenseCUDA));
16699566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",                           MatDenseCUDAGetArrayWrite_MPIDenseCUDA));
16709566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",                            MatDenseCUDARestoreArray_MPIDenseCUDA));
16719566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",                        MatDenseCUDARestoreArrayRead_MPIDenseCUDA));
16729566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",                       MatDenseCUDARestoreArrayWrite_MPIDenseCUDA));
16739566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",                              MatDenseCUDAPlaceArray_MPIDenseCUDA));
16749566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",                              MatDenseCUDAResetArray_MPIDenseCUDA));
16759566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",                            MatDenseCUDAReplaceArray_MPIDenseCUDA));
1676f5ff9c66SStefano Zampini   m    = (Mat_MPIDense*)(B->data);
1677637a0070SStefano Zampini   if (m->A) {
16789566063dSJacob Faibussowitsch     PetscCall(MatConvert(m->A,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&m->A));
1679637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_BOTH;
1680637a0070SStefano Zampini   } else {
1681637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_UNALLOCATED;
1682637a0070SStefano Zampini   }
16839566063dSJacob Faibussowitsch   PetscCall(MatBindToCPU_MPIDenseCUDA(B,PETSC_FALSE));
1684637a0070SStefano Zampini 
1685637a0070SStefano Zampini   B->ops->bindtocpu = MatBindToCPU_MPIDenseCUDA;
1686637a0070SStefano Zampini   PetscFunctionReturn(0);
1687637a0070SStefano Zampini }
1688637a0070SStefano Zampini #endif
1689637a0070SStefano Zampini 
16906947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
16916947451fSStefano Zampini {
16926947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
16936947451fSStefano Zampini   PetscInt       lda;
16946947451fSStefano Zampini 
16956947451fSStefano Zampini   PetscFunctionBegin;
169628b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
169728b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
16986947451fSStefano Zampini   if (!a->cvec) {
16999566063dSJacob Faibussowitsch     PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
17006947451fSStefano Zampini   }
17016947451fSStefano Zampini   a->vecinuse = col + 1;
17029566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
17039566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(a->A,(PetscScalar**)&a->ptrinuse));
17049566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
17056947451fSStefano Zampini   *v   = a->cvec;
17066947451fSStefano Zampini   PetscFunctionReturn(0);
17076947451fSStefano Zampini }
17086947451fSStefano Zampini 
17096947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
17106947451fSStefano Zampini {
17116947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17126947451fSStefano Zampini 
17136947451fSStefano Zampini   PetscFunctionBegin;
171428b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse,PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
171528b400f6SJacob Faibussowitsch   PetscCheck(a->cvec,PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
17166947451fSStefano Zampini   a->vecinuse = 0;
17179566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(a->A,(PetscScalar**)&a->ptrinuse));
17189566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
17196947451fSStefano Zampini   *v   = NULL;
17206947451fSStefano Zampini   PetscFunctionReturn(0);
17216947451fSStefano Zampini }
17226947451fSStefano Zampini 
17236947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
17246947451fSStefano Zampini {
17256947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17266947451fSStefano Zampini   PetscInt       lda;
17276947451fSStefano Zampini 
17286947451fSStefano Zampini   PetscFunctionBegin;
172928b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
173028b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17316947451fSStefano Zampini   if (!a->cvec) {
17329566063dSJacob Faibussowitsch     PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
17336947451fSStefano Zampini   }
17346947451fSStefano Zampini   a->vecinuse = col + 1;
17359566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
17369566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&a->ptrinuse));
17379566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
17389566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(a->cvec));
17396947451fSStefano Zampini   *v   = a->cvec;
17406947451fSStefano Zampini   PetscFunctionReturn(0);
17416947451fSStefano Zampini }
17426947451fSStefano Zampini 
17436947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
17446947451fSStefano Zampini {
17456947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17466947451fSStefano Zampini 
17476947451fSStefano Zampini   PetscFunctionBegin;
17485f80ce2aSJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
17495f80ce2aSJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
17506947451fSStefano Zampini   a->vecinuse = 0;
17519566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&a->ptrinuse));
17529566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(a->cvec));
17539566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
17546947451fSStefano Zampini   *v   = NULL;
17556947451fSStefano Zampini   PetscFunctionReturn(0);
17566947451fSStefano Zampini }
17576947451fSStefano Zampini 
17586947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
17596947451fSStefano Zampini {
17606947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17616947451fSStefano Zampini   PetscInt       lda;
17626947451fSStefano Zampini 
17636947451fSStefano Zampini   PetscFunctionBegin;
17645f80ce2aSJacob Faibussowitsch   PetscCheck(!a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
17655f80ce2aSJacob Faibussowitsch   PetscCheck(!a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17666947451fSStefano Zampini   if (!a->cvec) {
17679566063dSJacob Faibussowitsch     PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec));
17686947451fSStefano Zampini   }
17696947451fSStefano Zampini   a->vecinuse = col + 1;
17709566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&lda));
17719566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
17729566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda));
17736947451fSStefano Zampini   *v   = a->cvec;
17746947451fSStefano Zampini   PetscFunctionReturn(0);
17756947451fSStefano Zampini }
17766947451fSStefano Zampini 
17776947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
17786947451fSStefano Zampini {
17796947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
17806947451fSStefano Zampini 
17816947451fSStefano Zampini   PetscFunctionBegin;
17825f80ce2aSJacob Faibussowitsch   PetscCheck(a->vecinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
17835f80ce2aSJacob Faibussowitsch   PetscCheck(a->cvec,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
17846947451fSStefano Zampini   a->vecinuse = 0;
17859566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse));
17869566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
17876947451fSStefano Zampini   *v   = NULL;
17886947451fSStefano Zampini   PetscFunctionReturn(0);
17896947451fSStefano Zampini }
17906947451fSStefano Zampini 
17915ea7661aSPierre Jolivet PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A,PetscInt cbegin,PetscInt cend,Mat *v)
17925ea7661aSPierre Jolivet {
17935ea7661aSPierre Jolivet   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
1794616b8fbbSStefano Zampini   Mat_MPIDense *c;
1795616b8fbbSStefano Zampini   MPI_Comm     comm;
17965ea7661aSPierre Jolivet 
17975ea7661aSPierre Jolivet   PetscFunctionBegin;
17989566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
17995f80ce2aSJacob Faibussowitsch   PetscCheck(!a->vecinuse,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
18005f80ce2aSJacob Faibussowitsch   PetscCheck(!a->matinuse,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18015ea7661aSPierre Jolivet   if (!a->cmat) {
18029566063dSJacob Faibussowitsch     PetscCall(MatCreate(comm,&a->cmat));
18039566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A,(PetscObject)a->cmat));
18049566063dSJacob Faibussowitsch     PetscCall(MatSetType(a->cmat,((PetscObject)A)->type_name));
18059566063dSJacob Faibussowitsch     PetscCall(PetscLayoutReference(A->rmap,&a->cmat->rmap));
18069566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetSize(a->cmat->cmap,cend-cbegin));
18079566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(a->cmat->cmap));
1808616b8fbbSStefano Zampini   } else if (cend-cbegin != a->cmat->cmap->N) {
18099566063dSJacob Faibussowitsch     PetscCall(PetscLayoutDestroy(&a->cmat->cmap));
18109566063dSJacob Faibussowitsch     PetscCall(PetscLayoutCreate(comm,&a->cmat->cmap));
18119566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetSize(a->cmat->cmap,cend-cbegin));
18129566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(a->cmat->cmap));
18135ea7661aSPierre Jolivet   }
1814616b8fbbSStefano Zampini   c = (Mat_MPIDense*)a->cmat->data;
18155f80ce2aSJacob Faibussowitsch   PetscCheck(!c->A,comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18169566063dSJacob Faibussowitsch   PetscCall(MatDenseGetSubMatrix(a->A,cbegin,cend,&c->A));
1817616b8fbbSStefano Zampini   a->cmat->preallocated = PETSC_TRUE;
1818616b8fbbSStefano Zampini   a->cmat->assembled = PETSC_TRUE;
18195ea7661aSPierre Jolivet   a->matinuse = cbegin + 1;
18205ea7661aSPierre Jolivet   *v = a->cmat;
18215ea7661aSPierre Jolivet   PetscFunctionReturn(0);
18225ea7661aSPierre Jolivet }
18235ea7661aSPierre Jolivet 
18245ea7661aSPierre Jolivet PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A,Mat *v)
18255ea7661aSPierre Jolivet {
18265ea7661aSPierre Jolivet   Mat_MPIDense *a = (Mat_MPIDense*)A->data;
1827616b8fbbSStefano Zampini   Mat_MPIDense *c;
18285ea7661aSPierre Jolivet 
18295ea7661aSPierre Jolivet   PetscFunctionBegin;
18305f80ce2aSJacob Faibussowitsch   PetscCheck(a->matinuse,PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetSubMatrix() first");
18315f80ce2aSJacob Faibussowitsch   PetscCheck(a->cmat,PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal matrix");
18325f80ce2aSJacob Faibussowitsch   PetscCheck(*v == a->cmat,PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Not the matrix obtained from MatDenseGetSubMatrix()");
18335ea7661aSPierre Jolivet   a->matinuse = 0;
1834616b8fbbSStefano Zampini   c    = (Mat_MPIDense*)a->cmat->data;
18359566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreSubMatrix(a->A,&c->A));
18365ea7661aSPierre Jolivet   *v   = NULL;
18375ea7661aSPierre Jolivet   PetscFunctionReturn(0);
18385ea7661aSPierre Jolivet }
18395ea7661aSPierre Jolivet 
1840002bc6daSRichard Tran Mills /*MC
1841002bc6daSRichard Tran Mills    MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices.
1842002bc6daSRichard Tran Mills 
1843002bc6daSRichard Tran Mills    Options Database Keys:
1844002bc6daSRichard Tran Mills . -mat_type mpidense - sets the matrix type to "mpidense" during a call to MatSetFromOptions()
1845002bc6daSRichard Tran Mills 
1846002bc6daSRichard Tran Mills   Level: beginner
1847002bc6daSRichard Tran Mills 
1848002bc6daSRichard Tran Mills .seealso: MatCreateDense()
1849002bc6daSRichard Tran Mills 
1850002bc6daSRichard Tran Mills M*/
18518cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreate_MPIDense(Mat mat)
1852273d9f13SBarry Smith {
1853273d9f13SBarry Smith   Mat_MPIDense   *a;
1854273d9f13SBarry Smith 
1855273d9f13SBarry Smith   PetscFunctionBegin;
18569566063dSJacob Faibussowitsch   PetscCall(PetscNewLog(mat,&a));
1857b0a32e0cSBarry Smith   mat->data = (void*)a;
18589566063dSJacob Faibussowitsch   PetscCall(PetscMemcpy(mat->ops,&MatOps_Values,sizeof(struct _MatOps)));
1859273d9f13SBarry Smith 
1860273d9f13SBarry Smith   mat->insertmode = NOT_SET_VALUES;
1861273d9f13SBarry Smith 
1862273d9f13SBarry Smith   /* build cache for off array entries formed */
1863273d9f13SBarry Smith   a->donotstash = PETSC_FALSE;
18642205254eSKarl Rupp 
18659566063dSJacob Faibussowitsch   PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat),1,&mat->stash));
1866273d9f13SBarry Smith 
1867273d9f13SBarry Smith   /* stuff used for matrix vector multiply */
1868f4259b30SLisandro Dalcin   a->lvec        = NULL;
1869f4259b30SLisandro Dalcin   a->Mvctx       = NULL;
1870273d9f13SBarry Smith   a->roworiented = PETSC_TRUE;
1871273d9f13SBarry Smith 
18729566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",MatDenseGetLDA_MPIDense));
18739566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",MatDenseSetLDA_MPIDense));
18749566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",MatDenseGetArray_MPIDense));
18759566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",MatDenseRestoreArray_MPIDense));
18769566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",MatDenseGetArrayRead_MPIDense));
18779566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",MatDenseRestoreArrayRead_MPIDense));
18789566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",MatDenseGetArrayWrite_MPIDense));
18799566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",MatDenseRestoreArrayWrite_MPIDense));
18809566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",MatDensePlaceArray_MPIDense));
18819566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",MatDenseResetArray_MPIDense));
18829566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",MatDenseReplaceArray_MPIDense));
18839566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense));
18849566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense));
18859566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense));
18869566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense));
18879566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense));
18889566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense));
18899566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",MatDenseGetSubMatrix_MPIDense));
18909566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",MatDenseRestoreSubMatrix_MPIDense));
18919566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpiaij_mpidense_C",MatConvert_MPIAIJ_MPIDense));
18929566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpiaij_C",MatConvert_MPIDense_MPIAIJ));
18938baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
18949566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",MatConvert_MPIDense_Elemental));
18958baccfbdSHong Zhang #endif
1896d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
18979566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",MatConvert_Dense_ScaLAPACK));
1898d24d4204SJose E. Roman #endif
1899637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
19009566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpidensecuda_C",MatConvert_MPIDense_MPIDenseCUDA));
1901637a0070SStefano Zampini #endif
19029566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",MatMPIDenseSetPreallocation_MPIDense));
19039566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
19049566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
19056718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
19069566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense));
19079566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ));
19086718818eSStefano Zampini #endif
19098949adfdSHong Zhang 
19109566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",MatDenseGetColumn_MPIDense));
19119566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",MatDenseRestoreColumn_MPIDense));
19129566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)mat,MATMPIDENSE));
1913273d9f13SBarry Smith   PetscFunctionReturn(0);
1914273d9f13SBarry Smith }
1915273d9f13SBarry Smith 
1916209238afSKris Buschelman /*MC
1917637a0070SStefano Zampini    MATMPIDENSECUDA - MATMPIDENSECUDA = "mpidensecuda" - A matrix type to be used for distributed dense matrices on GPUs.
1918637a0070SStefano Zampini 
1919637a0070SStefano Zampini    Options Database Keys:
1920637a0070SStefano Zampini . -mat_type mpidensecuda - sets the matrix type to "mpidensecuda" during a call to MatSetFromOptions()
1921637a0070SStefano Zampini 
1922637a0070SStefano Zampini   Level: beginner
1923637a0070SStefano Zampini 
1924637a0070SStefano Zampini .seealso:
1925637a0070SStefano Zampini 
1926637a0070SStefano Zampini M*/
1927637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1928a4af0ceeSJacob Faibussowitsch #include <petsc/private/deviceimpl.h>
1929637a0070SStefano Zampini PETSC_EXTERN PetscErrorCode MatCreate_MPIDenseCUDA(Mat B)
1930637a0070SStefano Zampini {
1931637a0070SStefano Zampini   PetscFunctionBegin;
19329566063dSJacob Faibussowitsch   PetscCall(PetscDeviceInitialize(PETSC_DEVICE_CUDA));
19339566063dSJacob Faibussowitsch   PetscCall(MatCreate_MPIDense(B));
19349566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_MPIDenseCUDA(B,MATMPIDENSECUDA,MAT_INPLACE_MATRIX,&B));
1935637a0070SStefano Zampini   PetscFunctionReturn(0);
1936637a0070SStefano Zampini }
1937637a0070SStefano Zampini #endif
1938637a0070SStefano Zampini 
1939637a0070SStefano Zampini /*MC
1940002d173eSKris Buschelman    MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices.
1941209238afSKris Buschelman 
1942209238afSKris Buschelman    This matrix type is identical to MATSEQDENSE when constructed with a single process communicator,
1943209238afSKris Buschelman    and MATMPIDENSE otherwise.
1944209238afSKris Buschelman 
1945209238afSKris Buschelman    Options Database Keys:
1946209238afSKris Buschelman . -mat_type dense - sets the matrix type to "dense" during a call to MatSetFromOptions()
1947209238afSKris Buschelman 
1948209238afSKris Buschelman   Level: beginner
1949209238afSKris Buschelman 
19506947451fSStefano Zampini .seealso: MATSEQDENSE,MATMPIDENSE,MATDENSECUDA
19516947451fSStefano Zampini M*/
19526947451fSStefano Zampini 
19536947451fSStefano Zampini /*MC
19546947451fSStefano Zampini    MATDENSECUDA - MATDENSECUDA = "densecuda" - A matrix type to be used for dense matrices on GPUs.
19556947451fSStefano Zampini 
19566947451fSStefano Zampini    This matrix type is identical to MATSEQDENSECUDA when constructed with a single process communicator,
19576947451fSStefano Zampini    and MATMPIDENSECUDA otherwise.
19586947451fSStefano Zampini 
19596947451fSStefano Zampini    Options Database Keys:
19606947451fSStefano Zampini . -mat_type densecuda - sets the matrix type to "densecuda" during a call to MatSetFromOptions()
19616947451fSStefano Zampini 
19626947451fSStefano Zampini   Level: beginner
19636947451fSStefano Zampini 
19646947451fSStefano Zampini .seealso: MATSEQDENSECUDA,MATMPIDENSECUDA,MATDENSE
1965209238afSKris Buschelman M*/
1966209238afSKris Buschelman 
1967273d9f13SBarry Smith /*@C
1968273d9f13SBarry Smith    MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries
1969273d9f13SBarry Smith 
19708f490ea3SStefano Zampini    Collective
1971273d9f13SBarry Smith 
1972273d9f13SBarry Smith    Input Parameters:
19731c4f3114SJed Brown .  B - the matrix
19740298fd71SBarry Smith -  data - optional location of matrix data.  Set data=NULL for PETSc
1975273d9f13SBarry Smith    to control all matrix memory allocation.
1976273d9f13SBarry Smith 
1977273d9f13SBarry Smith    Notes:
1978273d9f13SBarry Smith    The dense format is fully compatible with standard Fortran 77
1979273d9f13SBarry Smith    storage by columns.
1980273d9f13SBarry Smith 
1981273d9f13SBarry Smith    The data input variable is intended primarily for Fortran programmers
1982273d9f13SBarry Smith    who wish to allocate their own matrix memory space.  Most users should
19830298fd71SBarry Smith    set data=NULL.
1984273d9f13SBarry Smith 
1985273d9f13SBarry Smith    Level: intermediate
1986273d9f13SBarry Smith 
1987273d9f13SBarry Smith .seealso: MatCreate(), MatCreateSeqDense(), MatSetValues()
1988273d9f13SBarry Smith @*/
19891c4f3114SJed Brown PetscErrorCode  MatMPIDenseSetPreallocation(Mat B,PetscScalar *data)
1990273d9f13SBarry Smith {
1991273d9f13SBarry Smith   PetscFunctionBegin;
1992d5ea218eSStefano Zampini   PetscValidHeaderSpecific(B,MAT_CLASSID,1);
1993cac4c232SBarry Smith   PetscTryMethod(B,"MatMPIDenseSetPreallocation_C",(Mat,PetscScalar*),(B,data));
1994273d9f13SBarry Smith   PetscFunctionReturn(0);
1995273d9f13SBarry Smith }
1996273d9f13SBarry Smith 
1997d3042a70SBarry Smith /*@
1998637a0070SStefano Zampini    MatDensePlaceArray - Allows one to replace the array in a dense matrix with an
1999d3042a70SBarry Smith    array provided by the user. This is useful to avoid copying an array
2000d3042a70SBarry Smith    into a matrix
2001d3042a70SBarry Smith 
2002d3042a70SBarry Smith    Not Collective
2003d3042a70SBarry Smith 
2004d3042a70SBarry Smith    Input Parameters:
2005d3042a70SBarry Smith +  mat - the matrix
2006d3042a70SBarry Smith -  array - the array in column major order
2007d3042a70SBarry Smith 
2008d3042a70SBarry Smith    Notes:
2009d3042a70SBarry Smith    You can return to the original array with a call to MatDenseResetArray(). The user is responsible for freeing this array; it will not be
2010d3042a70SBarry Smith    freed when the matrix is destroyed.
2011d3042a70SBarry Smith 
2012d3042a70SBarry Smith    Level: developer
2013d3042a70SBarry Smith 
2014d3042a70SBarry Smith .seealso: MatDenseGetArray(), MatDenseResetArray(), VecPlaceArray(), VecGetArray(), VecRestoreArray(), VecReplaceArray(), VecResetArray()
2015d3042a70SBarry Smith 
2016d3042a70SBarry Smith @*/
2017637a0070SStefano Zampini PetscErrorCode  MatDensePlaceArray(Mat mat,const PetscScalar *array)
2018d3042a70SBarry Smith {
2019d3042a70SBarry Smith   PetscFunctionBegin;
2020d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2021cac4c232SBarry Smith   PetscUseMethod(mat,"MatDensePlaceArray_C",(Mat,const PetscScalar*),(mat,array));
20229566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2023637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2024637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2025637a0070SStefano Zampini #endif
2026d3042a70SBarry Smith   PetscFunctionReturn(0);
2027d3042a70SBarry Smith }
2028d3042a70SBarry Smith 
2029d3042a70SBarry Smith /*@
2030d3042a70SBarry Smith    MatDenseResetArray - Resets the matrix array to that it previously had before the call to MatDensePlaceArray()
2031d3042a70SBarry Smith 
2032d3042a70SBarry Smith    Not Collective
2033d3042a70SBarry Smith 
2034d3042a70SBarry Smith    Input Parameters:
2035d3042a70SBarry Smith .  mat - the matrix
2036d3042a70SBarry Smith 
2037d3042a70SBarry Smith    Notes:
2038d3042a70SBarry Smith    You can only call this after a call to MatDensePlaceArray()
2039d3042a70SBarry Smith 
2040d3042a70SBarry Smith    Level: developer
2041d3042a70SBarry Smith 
2042d3042a70SBarry Smith .seealso: MatDenseGetArray(), MatDensePlaceArray(), VecPlaceArray(), VecGetArray(), VecRestoreArray(), VecReplaceArray(), VecResetArray()
2043d3042a70SBarry Smith 
2044d3042a70SBarry Smith @*/
2045d3042a70SBarry Smith PetscErrorCode  MatDenseResetArray(Mat mat)
2046d3042a70SBarry Smith {
2047d3042a70SBarry Smith   PetscFunctionBegin;
2048d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2049cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseResetArray_C",(Mat),(mat));
20509566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2051d3042a70SBarry Smith   PetscFunctionReturn(0);
2052d3042a70SBarry Smith }
2053d3042a70SBarry Smith 
2054d5ea218eSStefano Zampini /*@
2055d5ea218eSStefano Zampini    MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an
2056d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2057d5ea218eSStefano Zampini    into a matrix
2058d5ea218eSStefano Zampini 
2059d5ea218eSStefano Zampini    Not Collective
2060d5ea218eSStefano Zampini 
2061d5ea218eSStefano Zampini    Input Parameters:
2062d5ea218eSStefano Zampini +  mat - the matrix
2063d5ea218eSStefano Zampini -  array - the array in column major order
2064d5ea218eSStefano Zampini 
2065d5ea218eSStefano Zampini    Notes:
2066d5ea218eSStefano Zampini    The memory passed in MUST be obtained with PetscMalloc() and CANNOT be
2067d5ea218eSStefano Zampini    freed by the user. It will be freed when the matrix is destroyed.
2068d5ea218eSStefano Zampini 
2069d5ea218eSStefano Zampini    Level: developer
2070d5ea218eSStefano Zampini 
2071d5ea218eSStefano Zampini .seealso: MatDenseGetArray(), VecReplaceArray()
2072d5ea218eSStefano Zampini @*/
2073d5ea218eSStefano Zampini PetscErrorCode  MatDenseReplaceArray(Mat mat,const PetscScalar *array)
2074d5ea218eSStefano Zampini {
2075d5ea218eSStefano Zampini   PetscFunctionBegin;
2076d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2077cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseReplaceArray_C",(Mat,const PetscScalar*),(mat,array));
20789566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2079d5ea218eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
2080d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2081d5ea218eSStefano Zampini #endif
2082d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2083d5ea218eSStefano Zampini }
2084d5ea218eSStefano Zampini 
2085637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
20868965ea79SLois Curfman McInnes /*@C
2087637a0070SStefano Zampini    MatDenseCUDAPlaceArray - Allows one to replace the GPU array in a dense matrix with an
2088637a0070SStefano Zampini    array provided by the user. This is useful to avoid copying an array
2089637a0070SStefano Zampini    into a matrix
2090637a0070SStefano Zampini 
2091637a0070SStefano Zampini    Not Collective
2092637a0070SStefano Zampini 
2093637a0070SStefano Zampini    Input Parameters:
2094637a0070SStefano Zampini +  mat - the matrix
2095637a0070SStefano Zampini -  array - the array in column major order
2096637a0070SStefano Zampini 
2097637a0070SStefano Zampini    Notes:
2098637a0070SStefano Zampini    You can return to the original array with a call to MatDenseCUDAResetArray(). The user is responsible for freeing this array; it will not be
2099637a0070SStefano Zampini    freed when the matrix is destroyed. The array must have been allocated with cudaMalloc().
2100637a0070SStefano Zampini 
2101637a0070SStefano Zampini    Level: developer
2102637a0070SStefano Zampini 
2103637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAResetArray()
2104637a0070SStefano Zampini @*/
2105637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAPlaceArray(Mat mat,const PetscScalar *array)
2106637a0070SStefano Zampini {
2107637a0070SStefano Zampini   PetscFunctionBegin;
2108d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2109cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseCUDAPlaceArray_C",(Mat,const PetscScalar*),(mat,array));
21109566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2111637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2112637a0070SStefano Zampini   PetscFunctionReturn(0);
2113637a0070SStefano Zampini }
2114637a0070SStefano Zampini 
2115637a0070SStefano Zampini /*@C
2116637a0070SStefano Zampini    MatDenseCUDAResetArray - Resets the matrix array to that it previously had before the call to MatDenseCUDAPlaceArray()
2117637a0070SStefano Zampini 
2118637a0070SStefano Zampini    Not Collective
2119637a0070SStefano Zampini 
2120637a0070SStefano Zampini    Input Parameters:
2121637a0070SStefano Zampini .  mat - the matrix
2122637a0070SStefano Zampini 
2123637a0070SStefano Zampini    Notes:
2124637a0070SStefano Zampini    You can only call this after a call to MatDenseCUDAPlaceArray()
2125637a0070SStefano Zampini 
2126637a0070SStefano Zampini    Level: developer
2127637a0070SStefano Zampini 
2128637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAPlaceArray()
2129637a0070SStefano Zampini 
2130637a0070SStefano Zampini @*/
2131637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAResetArray(Mat mat)
2132637a0070SStefano Zampini {
2133637a0070SStefano Zampini   PetscFunctionBegin;
2134d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2135cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseCUDAResetArray_C",(Mat),(mat));
21369566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2137637a0070SStefano Zampini   PetscFunctionReturn(0);
2138637a0070SStefano Zampini }
2139637a0070SStefano Zampini 
2140637a0070SStefano Zampini /*@C
2141d5ea218eSStefano Zampini    MatDenseCUDAReplaceArray - Allows one to replace the GPU array in a dense matrix with an
2142d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2143d5ea218eSStefano Zampini    into a matrix
2144d5ea218eSStefano Zampini 
2145d5ea218eSStefano Zampini    Not Collective
2146d5ea218eSStefano Zampini 
2147d5ea218eSStefano Zampini    Input Parameters:
2148d5ea218eSStefano Zampini +  mat - the matrix
2149d5ea218eSStefano Zampini -  array - the array in column major order
2150d5ea218eSStefano Zampini 
2151d5ea218eSStefano Zampini    Notes:
2152d5ea218eSStefano Zampini    This permanently replaces the GPU array and frees the memory associated with the old GPU array.
2153d5ea218eSStefano Zampini    The memory passed in CANNOT be freed by the user. It will be freed
2154d5ea218eSStefano Zampini    when the matrix is destroyed. The array should respect the matrix leading dimension.
2155d5ea218eSStefano Zampini 
2156d5ea218eSStefano Zampini    Level: developer
2157d5ea218eSStefano Zampini 
2158d5ea218eSStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAPlaceArray(), MatDenseCUDAResetArray()
2159d5ea218eSStefano Zampini @*/
2160d5ea218eSStefano Zampini PetscErrorCode  MatDenseCUDAReplaceArray(Mat mat,const PetscScalar *array)
2161d5ea218eSStefano Zampini {
2162d5ea218eSStefano Zampini   PetscFunctionBegin;
2163d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2164cac4c232SBarry Smith   PetscUseMethod(mat,"MatDenseCUDAReplaceArray_C",(Mat,const PetscScalar*),(mat,array));
21659566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2166d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2167d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2168d5ea218eSStefano Zampini }
2169d5ea218eSStefano Zampini 
2170d5ea218eSStefano Zampini /*@C
2171637a0070SStefano Zampini    MatDenseCUDAGetArrayWrite - Provides write access to the CUDA buffer inside a dense matrix.
2172637a0070SStefano Zampini 
2173637a0070SStefano Zampini    Not Collective
2174637a0070SStefano Zampini 
2175637a0070SStefano Zampini    Input Parameters:
2176637a0070SStefano Zampini .  A - the matrix
2177637a0070SStefano Zampini 
2178637a0070SStefano Zampini    Output Parameters
2179637a0070SStefano Zampini .  array - the GPU array in column major order
2180637a0070SStefano Zampini 
2181637a0070SStefano Zampini    Notes:
2182637a0070SStefano Zampini    The data on the GPU may not be updated due to operations done on the CPU. If you need updated data, use MatDenseCUDAGetArray(). The array must be restored with MatDenseCUDARestoreArrayWrite() when no longer needed.
2183637a0070SStefano Zampini 
2184637a0070SStefano Zampini    Level: developer
2185637a0070SStefano Zampini 
2186637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayRead(), MatDenseCUDARestoreArrayRead()
2187637a0070SStefano Zampini @*/
2188637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayWrite(Mat A, PetscScalar **a)
2189637a0070SStefano Zampini {
2190637a0070SStefano Zampini   PetscFunctionBegin;
2191d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2192cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDAGetArrayWrite_C",(Mat,PetscScalar**),(A,a));
21939566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2194637a0070SStefano Zampini   PetscFunctionReturn(0);
2195637a0070SStefano Zampini }
2196637a0070SStefano Zampini 
2197637a0070SStefano Zampini /*@C
2198637a0070SStefano Zampini    MatDenseCUDARestoreArrayWrite - Restore write access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArrayWrite().
2199637a0070SStefano Zampini 
2200637a0070SStefano Zampini    Not Collective
2201637a0070SStefano Zampini 
2202637a0070SStefano Zampini    Input Parameters:
2203637a0070SStefano Zampini +  A - the matrix
2204637a0070SStefano Zampini -  array - the GPU array in column major order
2205637a0070SStefano Zampini 
2206637a0070SStefano Zampini    Notes:
2207637a0070SStefano Zampini 
2208637a0070SStefano Zampini    Level: developer
2209637a0070SStefano Zampini 
2210637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead(), MatDenseCUDAGetArrayRead()
2211637a0070SStefano Zampini @*/
2212637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayWrite(Mat A, PetscScalar **a)
2213637a0070SStefano Zampini {
2214637a0070SStefano Zampini   PetscFunctionBegin;
2215d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2216cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDARestoreArrayWrite_C",(Mat,PetscScalar**),(A,a));
22179566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2218637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2219637a0070SStefano Zampini   PetscFunctionReturn(0);
2220637a0070SStefano Zampini }
2221637a0070SStefano Zampini 
2222637a0070SStefano Zampini /*@C
2223637a0070SStefano Zampini    MatDenseCUDAGetArrayRead - Provides read-only access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArrayRead() when no longer needed.
2224637a0070SStefano Zampini 
2225637a0070SStefano Zampini    Not Collective
2226637a0070SStefano Zampini 
2227637a0070SStefano Zampini    Input Parameters:
2228637a0070SStefano Zampini .  A - the matrix
2229637a0070SStefano Zampini 
2230637a0070SStefano Zampini    Output Parameters
2231637a0070SStefano Zampini .  array - the GPU array in column major order
2232637a0070SStefano Zampini 
2233637a0070SStefano Zampini    Notes:
2234637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2235637a0070SStefano Zampini 
2236637a0070SStefano Zampini    Level: developer
2237637a0070SStefano Zampini 
2238637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead()
2239637a0070SStefano Zampini @*/
2240637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayRead(Mat A, const PetscScalar **a)
2241637a0070SStefano Zampini {
2242637a0070SStefano Zampini   PetscFunctionBegin;
2243d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2244cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDAGetArrayRead_C",(Mat,const PetscScalar**),(A,a));
2245637a0070SStefano Zampini   PetscFunctionReturn(0);
2246637a0070SStefano Zampini }
2247637a0070SStefano Zampini 
2248637a0070SStefano Zampini /*@C
2249637a0070SStefano Zampini    MatDenseCUDARestoreArrayRead - Restore read-only access to the CUDA buffer inside a dense matrix previously obtained with a call to MatDenseCUDAGetArrayRead().
2250637a0070SStefano Zampini 
2251637a0070SStefano Zampini    Not Collective
2252637a0070SStefano Zampini 
2253637a0070SStefano Zampini    Input Parameters:
2254637a0070SStefano Zampini +  A - the matrix
2255637a0070SStefano Zampini -  array - the GPU array in column major order
2256637a0070SStefano Zampini 
2257637a0070SStefano Zampini    Notes:
2258637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2259637a0070SStefano Zampini 
2260637a0070SStefano Zampini    Level: developer
2261637a0070SStefano Zampini 
2262637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDAGetArrayRead()
2263637a0070SStefano Zampini @*/
2264637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayRead(Mat A, const PetscScalar **a)
2265637a0070SStefano Zampini {
2266637a0070SStefano Zampini   PetscFunctionBegin;
2267cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDARestoreArrayRead_C",(Mat,const PetscScalar**),(A,a));
2268637a0070SStefano Zampini   PetscFunctionReturn(0);
2269637a0070SStefano Zampini }
2270637a0070SStefano Zampini 
2271637a0070SStefano Zampini /*@C
2272637a0070SStefano Zampini    MatDenseCUDAGetArray - Provides access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArray() when no longer needed.
2273637a0070SStefano Zampini 
2274637a0070SStefano Zampini    Not Collective
2275637a0070SStefano Zampini 
2276637a0070SStefano Zampini    Input Parameters:
2277637a0070SStefano Zampini .  A - the matrix
2278637a0070SStefano Zampini 
2279637a0070SStefano Zampini    Output Parameters
2280637a0070SStefano Zampini .  array - the GPU array in column major order
2281637a0070SStefano Zampini 
2282637a0070SStefano Zampini    Notes:
2283637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite(). For read-only access, use MatDenseCUDAGetArrayRead().
2284637a0070SStefano Zampini 
2285637a0070SStefano Zampini    Level: developer
2286637a0070SStefano Zampini 
2287637a0070SStefano Zampini .seealso: MatDenseCUDAGetArrayRead(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead()
2288637a0070SStefano Zampini @*/
2289637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArray(Mat A, PetscScalar **a)
2290637a0070SStefano Zampini {
2291637a0070SStefano Zampini   PetscFunctionBegin;
2292d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2293cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDAGetArray_C",(Mat,PetscScalar**),(A,a));
22949566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2295637a0070SStefano Zampini   PetscFunctionReturn(0);
2296637a0070SStefano Zampini }
2297637a0070SStefano Zampini 
2298637a0070SStefano Zampini /*@C
2299637a0070SStefano Zampini    MatDenseCUDARestoreArray - Restore access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArray().
2300637a0070SStefano Zampini 
2301637a0070SStefano Zampini    Not Collective
2302637a0070SStefano Zampini 
2303637a0070SStefano Zampini    Input Parameters:
2304637a0070SStefano Zampini +  A - the matrix
2305637a0070SStefano Zampini -  array - the GPU array in column major order
2306637a0070SStefano Zampini 
2307637a0070SStefano Zampini    Notes:
2308637a0070SStefano Zampini 
2309637a0070SStefano Zampini    Level: developer
2310637a0070SStefano Zampini 
2311637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead(), MatDenseCUDAGetArrayRead()
2312637a0070SStefano Zampini @*/
2313637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArray(Mat A, PetscScalar **a)
2314637a0070SStefano Zampini {
2315637a0070SStefano Zampini   PetscFunctionBegin;
2316d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2317cac4c232SBarry Smith   PetscUseMethod(A,"MatDenseCUDARestoreArray_C",(Mat,PetscScalar**),(A,a));
23189566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2319637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2320637a0070SStefano Zampini   PetscFunctionReturn(0);
2321637a0070SStefano Zampini }
2322637a0070SStefano Zampini #endif
2323637a0070SStefano Zampini 
2324637a0070SStefano Zampini /*@C
2325637a0070SStefano Zampini    MatCreateDense - Creates a matrix in dense format.
23268965ea79SLois Curfman McInnes 
2327d083f849SBarry Smith    Collective
2328db81eaa0SLois Curfman McInnes 
23298965ea79SLois Curfman McInnes    Input Parameters:
2330db81eaa0SLois Curfman McInnes +  comm - MPI communicator
23318965ea79SLois Curfman McInnes .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2332db81eaa0SLois Curfman McInnes .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
23338965ea79SLois Curfman McInnes .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2334db81eaa0SLois Curfman McInnes .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
23356cfe35ddSJose E. Roman -  data - optional location of matrix data.  Set data=NULL (PETSC_NULL_SCALAR for Fortran users) for PETSc
2336dfc5480cSLois Curfman McInnes    to control all matrix memory allocation.
23378965ea79SLois Curfman McInnes 
23388965ea79SLois Curfman McInnes    Output Parameter:
2339477f1c0bSLois Curfman McInnes .  A - the matrix
23408965ea79SLois Curfman McInnes 
2341b259b22eSLois Curfman McInnes    Notes:
234239ddd567SLois Curfman McInnes    The dense format is fully compatible with standard Fortran 77
234339ddd567SLois Curfman McInnes    storage by columns.
2344002bc6daSRichard Tran Mills    Note that, although local portions of the matrix are stored in column-major
2345002bc6daSRichard Tran Mills    order, the matrix is partitioned across MPI ranks by row.
23468965ea79SLois Curfman McInnes 
234718f449edSLois Curfman McInnes    The data input variable is intended primarily for Fortran programmers
234818f449edSLois Curfman McInnes    who wish to allocate their own matrix memory space.  Most users should
23496cfe35ddSJose E. Roman    set data=NULL (PETSC_NULL_SCALAR for Fortran users).
235018f449edSLois Curfman McInnes 
23518965ea79SLois Curfman McInnes    The user MUST specify either the local or global matrix dimensions
23528965ea79SLois Curfman McInnes    (possibly both).
23538965ea79SLois Curfman McInnes 
2354027ccd11SLois Curfman McInnes    Level: intermediate
2355027ccd11SLois Curfman McInnes 
235639ddd567SLois Curfman McInnes .seealso: MatCreate(), MatCreateSeqDense(), MatSetValues()
23578965ea79SLois Curfman McInnes @*/
235869b1f4b7SBarry Smith PetscErrorCode  MatCreateDense(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
23598965ea79SLois Curfman McInnes {
23603a40ed3dSBarry Smith   PetscFunctionBegin;
23619566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm,A));
23629566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A,m,n,M,N));
2363*6f08ad05SPierre Jolivet   PetscCall(MatSetType(*A,MATDENSE));
23649566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseSetPreallocation(*A,data));
2365*6f08ad05SPierre Jolivet   PetscCall(MatMPIDenseSetPreallocation(*A,data));
23663a40ed3dSBarry Smith   PetscFunctionReturn(0);
23678965ea79SLois Curfman McInnes }
23688965ea79SLois Curfman McInnes 
2369637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2370637a0070SStefano Zampini /*@C
2371637a0070SStefano Zampini    MatCreateDenseCUDA - Creates a matrix in dense format using CUDA.
2372637a0070SStefano Zampini 
2373637a0070SStefano Zampini    Collective
2374637a0070SStefano Zampini 
2375637a0070SStefano Zampini    Input Parameters:
2376637a0070SStefano Zampini +  comm - MPI communicator
2377637a0070SStefano Zampini .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2378637a0070SStefano Zampini .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
2379637a0070SStefano Zampini .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2380637a0070SStefano Zampini .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
2381637a0070SStefano Zampini -  data - optional location of GPU matrix data.  Set data=NULL for PETSc
2382637a0070SStefano Zampini    to control matrix memory allocation.
2383637a0070SStefano Zampini 
2384637a0070SStefano Zampini    Output Parameter:
2385637a0070SStefano Zampini .  A - the matrix
2386637a0070SStefano Zampini 
2387637a0070SStefano Zampini    Notes:
2388637a0070SStefano Zampini 
2389637a0070SStefano Zampini    Level: intermediate
2390637a0070SStefano Zampini 
2391637a0070SStefano Zampini .seealso: MatCreate(), MatCreateDense()
2392637a0070SStefano Zampini @*/
2393637a0070SStefano Zampini PetscErrorCode  MatCreateDenseCUDA(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
2394637a0070SStefano Zampini {
2395637a0070SStefano Zampini   PetscFunctionBegin;
23969566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm,A));
2397637a0070SStefano Zampini   PetscValidLogicalCollectiveBool(*A,!!data,6);
23989566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A,m,n,M,N));
2399*6f08ad05SPierre Jolivet   PetscCall(MatSetType(*A,MATDENSECUDA));
24009566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseCUDASetPreallocation(*A,data));
2401*6f08ad05SPierre Jolivet   PetscCall(MatMPIDenseCUDASetPreallocation(*A,data));
2402637a0070SStefano Zampini   PetscFunctionReturn(0);
2403637a0070SStefano Zampini }
2404637a0070SStefano Zampini #endif
2405637a0070SStefano Zampini 
24066849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat A,MatDuplicateOption cpvalues,Mat *newmat)
24078965ea79SLois Curfman McInnes {
24088965ea79SLois Curfman McInnes   Mat            mat;
24093501a2bdSLois Curfman McInnes   Mat_MPIDense   *a,*oldmat = (Mat_MPIDense*)A->data;
24108965ea79SLois Curfman McInnes 
24113a40ed3dSBarry Smith   PetscFunctionBegin;
2412f4259b30SLisandro Dalcin   *newmat = NULL;
24139566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A),&mat));
24149566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(mat,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N));
24159566063dSJacob Faibussowitsch   PetscCall(MatSetType(mat,((PetscObject)A)->type_name));
2416834f8fabSBarry Smith   a       = (Mat_MPIDense*)mat->data;
24175aa7edbeSHong Zhang 
2418d5f3da31SBarry Smith   mat->factortype   = A->factortype;
2419c456f294SBarry Smith   mat->assembled    = PETSC_TRUE;
2420273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
24218965ea79SLois Curfman McInnes 
2422e0fa3b82SLois Curfman McInnes   mat->insertmode = NOT_SET_VALUES;
24233782ba37SSatish Balay   a->donotstash   = oldmat->donotstash;
2424e04c1aa4SHong Zhang 
24259566063dSJacob Faibussowitsch   PetscCall(PetscLayoutReference(A->rmap,&mat->rmap));
24269566063dSJacob Faibussowitsch   PetscCall(PetscLayoutReference(A->cmap,&mat->cmap));
24278965ea79SLois Curfman McInnes 
24289566063dSJacob Faibussowitsch   PetscCall(MatDuplicate(oldmat->A,cpvalues,&a->A));
24299566063dSJacob Faibussowitsch   PetscCall(PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A));
243001b82886SBarry Smith 
24318965ea79SLois Curfman McInnes   *newmat = mat;
24323a40ed3dSBarry Smith   PetscFunctionReturn(0);
24338965ea79SLois Curfman McInnes }
24348965ea79SLois Curfman McInnes 
2435eb91f321SVaclav Hapla PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer)
2436eb91f321SVaclav Hapla {
243787d5ce66SSatish Balay   PetscBool      isbinary;
243887d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
243987d5ce66SSatish Balay   PetscBool      ishdf5;
244087d5ce66SSatish Balay #endif
2441eb91f321SVaclav Hapla 
2442eb91f321SVaclav Hapla   PetscFunctionBegin;
2443eb91f321SVaclav Hapla   PetscValidHeaderSpecific(newMat,MAT_CLASSID,1);
2444eb91f321SVaclav Hapla   PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2);
2445eb91f321SVaclav Hapla   /* force binary viewer to load .info file if it has not yet done so */
24469566063dSJacob Faibussowitsch   PetscCall(PetscViewerSetUp(viewer));
24479566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary));
244887d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
24499566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERHDF5,  &ishdf5));
245087d5ce66SSatish Balay #endif
2451eb91f321SVaclav Hapla   if (isbinary) {
24529566063dSJacob Faibussowitsch     PetscCall(MatLoad_Dense_Binary(newMat,viewer));
2453eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5)
245487d5ce66SSatish Balay   } else if (ishdf5) {
24559566063dSJacob Faibussowitsch     PetscCall(MatLoad_Dense_HDF5(newMat,viewer));
2456eb91f321SVaclav Hapla #endif
245798921bdaSJacob Faibussowitsch   } else SETERRQ(PetscObjectComm((PetscObject)newMat),PETSC_ERR_SUP,"Viewer type %s not yet supported for reading %s matrices",((PetscObject)viewer)->type_name,((PetscObject)newMat)->type_name);
2458eb91f321SVaclav Hapla   PetscFunctionReturn(0);
2459eb91f321SVaclav Hapla }
2460eb91f321SVaclav Hapla 
24616718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat A,Mat B,PetscBool  *flag)
24626e4ee0c6SHong Zhang {
24636e4ee0c6SHong Zhang   Mat_MPIDense   *matB = (Mat_MPIDense*)B->data,*matA = (Mat_MPIDense*)A->data;
24646e4ee0c6SHong Zhang   Mat            a,b;
2465ace3abfcSBarry Smith   PetscBool      flg;
246690ace30eSBarry Smith 
24676e4ee0c6SHong Zhang   PetscFunctionBegin;
24686e4ee0c6SHong Zhang   a    = matA->A;
24696e4ee0c6SHong Zhang   b    = matB->A;
24709566063dSJacob Faibussowitsch   PetscCall(MatEqual(a,b,&flg));
24711c2dc1cbSBarry Smith   PetscCall(MPIU_Allreduce(&flg,flag,1,MPIU_BOOL,MPI_LAND,PetscObjectComm((PetscObject)A)));
24726e4ee0c6SHong Zhang   PetscFunctionReturn(0);
24736e4ee0c6SHong Zhang }
247490ace30eSBarry Smith 
24756718818eSStefano Zampini PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data)
2476baa3c1c6SHong Zhang {
24776718818eSStefano Zampini   Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data;
2478baa3c1c6SHong Zhang 
2479baa3c1c6SHong Zhang   PetscFunctionBegin;
24809566063dSJacob Faibussowitsch   PetscCall(PetscFree2(atb->sendbuf,atb->recvcounts));
24819566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&atb->atb));
24829566063dSJacob Faibussowitsch   PetscCall(PetscFree(atb));
2483baa3c1c6SHong Zhang   PetscFunctionReturn(0);
2484baa3c1c6SHong Zhang }
2485baa3c1c6SHong Zhang 
24866718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data)
2487cc48ffa7SToby Isaac {
24886718818eSStefano Zampini   Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data;
2489cc48ffa7SToby Isaac 
2490cc48ffa7SToby Isaac   PetscFunctionBegin;
24919566063dSJacob Faibussowitsch   PetscCall(PetscFree2(abt->buf[0],abt->buf[1]));
24929566063dSJacob Faibussowitsch   PetscCall(PetscFree2(abt->recvcounts,abt->recvdispls));
24939566063dSJacob Faibussowitsch   PetscCall(PetscFree(abt));
2494cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2495cc48ffa7SToby Isaac }
2496cc48ffa7SToby Isaac 
24976718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2498cb20be35SHong Zhang {
2499baa3c1c6SHong Zhang   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
25006718818eSStefano Zampini   Mat_TransMatMultDense *atb;
2501cb20be35SHong Zhang   MPI_Comm              comm;
25026718818eSStefano Zampini   PetscMPIInt           size,*recvcounts;
25036718818eSStefano Zampini   PetscScalar           *carray,*sendbuf;
2504637a0070SStefano Zampini   const PetscScalar     *atbarray;
2505a1f9a5e6SStefano Zampini   PetscInt              i,cN=C->cmap->N,proc,k,j,lda;
2506e68c0b26SHong Zhang   const PetscInt        *ranges;
2507cb20be35SHong Zhang 
2508cb20be35SHong Zhang   PetscFunctionBegin;
25096718818eSStefano Zampini   MatCheckProduct(C,3);
25105f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
25116718818eSStefano Zampini   atb = (Mat_TransMatMultDense *)C->product->data;
25126718818eSStefano Zampini   recvcounts = atb->recvcounts;
25136718818eSStefano Zampini   sendbuf = atb->sendbuf;
25146718818eSStefano Zampini 
25159566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
25169566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
2517e68c0b26SHong Zhang 
2518c5ef1628SHong Zhang   /* compute atbarray = aseq^T * bseq */
25199566063dSJacob Faibussowitsch   PetscCall(MatTransposeMatMult(a->A,b->A,atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX,PETSC_DEFAULT,&atb->atb));
2520cb20be35SHong Zhang 
25219566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(C,&ranges));
2522cb20be35SHong Zhang 
2523660d5466SHong Zhang   /* arrange atbarray into sendbuf */
25249566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(atb->atb,&atbarray));
25259566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(atb->atb,&lda));
2526637a0070SStefano Zampini   for (proc=0, k=0; proc<size; proc++) {
2527baa3c1c6SHong Zhang     for (j=0; j<cN; j++) {
2528a1f9a5e6SStefano Zampini       for (i=ranges[proc]; i<ranges[proc+1]; i++) sendbuf[k++] = atbarray[i+j*lda];
2529cb20be35SHong Zhang     }
2530cb20be35SHong Zhang   }
25319566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(atb->atb,&atbarray));
2532637a0070SStefano Zampini 
2533c5ef1628SHong Zhang   /* sum all atbarray to local values of C */
25349566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A,&carray));
25359566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Reduce_scatter(sendbuf,carray,recvcounts,MPIU_SCALAR,MPIU_SUM,comm));
25369566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A,&carray));
25379566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
25389566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2539cb20be35SHong Zhang   PetscFunctionReturn(0);
2540cb20be35SHong Zhang }
2541cb20be35SHong Zhang 
25426718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2543cb20be35SHong Zhang {
2544cb20be35SHong Zhang   MPI_Comm              comm;
2545baa3c1c6SHong Zhang   PetscMPIInt           size;
2546660d5466SHong Zhang   PetscInt              cm=A->cmap->n,cM,cN=B->cmap->N;
2547baa3c1c6SHong Zhang   Mat_TransMatMultDense *atb;
25486718818eSStefano Zampini   PetscBool             cisdense;
25490acaeb71SStefano Zampini   PetscInt              i;
25500acaeb71SStefano Zampini   const PetscInt        *ranges;
2551cb20be35SHong Zhang 
2552cb20be35SHong Zhang   PetscFunctionBegin;
25536718818eSStefano Zampini   MatCheckProduct(C,3);
25545f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
25559566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
2556cb20be35SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) {
255798921bdaSJacob Faibussowitsch     SETERRQ(comm,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2558cb20be35SHong Zhang   }
2559cb20be35SHong Zhang 
25604222ddf1SHong Zhang   /* create matrix product C */
25619566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C,cm,B->cmap->n,A->cmap->N,B->cmap->N));
25629566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompareAny((PetscObject)C,&cisdense,MATMPIDENSE,MATMPIDENSECUDA,""));
25636718818eSStefano Zampini   if (!cisdense) {
25649566063dSJacob Faibussowitsch     PetscCall(MatSetType(C,((PetscObject)A)->type_name));
25656718818eSStefano Zampini   }
25669566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
2567baa3c1c6SHong Zhang 
25684222ddf1SHong Zhang   /* create data structure for reuse C */
25699566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
25709566063dSJacob Faibussowitsch   PetscCall(PetscNew(&atb));
25714222ddf1SHong Zhang   cM   = C->rmap->N;
25729566063dSJacob Faibussowitsch   PetscCall(PetscMalloc2(cM*cN,&atb->sendbuf,size,&atb->recvcounts));
25739566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(C,&ranges));
25740acaeb71SStefano Zampini   for (i=0; i<size; i++) atb->recvcounts[i] = (ranges[i+1] - ranges[i])*cN;
2575baa3c1c6SHong Zhang 
25766718818eSStefano Zampini   C->product->data    = atb;
25776718818eSStefano Zampini   C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense;
2578cb20be35SHong Zhang   PetscFunctionReturn(0);
2579cb20be35SHong Zhang }
2580cb20be35SHong Zhang 
25814222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C)
2582cb20be35SHong Zhang {
2583cc48ffa7SToby Isaac   MPI_Comm              comm;
2584cc48ffa7SToby Isaac   PetscMPIInt           i, size;
2585cc48ffa7SToby Isaac   PetscInt              maxRows, bufsiz;
2586cc48ffa7SToby Isaac   PetscMPIInt           tag;
25874222ddf1SHong Zhang   PetscInt              alg;
2588cc48ffa7SToby Isaac   Mat_MatTransMultDense *abt;
25894222ddf1SHong Zhang   Mat_Product           *product = C->product;
25904222ddf1SHong Zhang   PetscBool             flg;
2591cc48ffa7SToby Isaac 
2592cc48ffa7SToby Isaac   PetscFunctionBegin;
25936718818eSStefano Zampini   MatCheckProduct(C,4);
25945f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
25954222ddf1SHong Zhang   /* check local size of A and B */
25965f80ce2aSJacob Faibussowitsch   PetscCheck(A->cmap->n == B->cmap->n,PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")",A->cmap->n,B->cmap->n);
2597cc48ffa7SToby Isaac 
25989566063dSJacob Faibussowitsch   PetscCall(PetscStrcmp(product->alg,"allgatherv",&flg));
2599637a0070SStefano Zampini   alg  = flg ? 0 : 1;
2600cc48ffa7SToby Isaac 
26014222ddf1SHong Zhang   /* setup matrix product C */
26029566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C,A->rmap->n,B->rmap->n,A->rmap->N,B->rmap->N));
26039566063dSJacob Faibussowitsch   PetscCall(MatSetType(C,MATMPIDENSE));
26049566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
26059566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetNewTag((PetscObject)C,&tag));
26064222ddf1SHong Zhang 
26074222ddf1SHong Zhang   /* create data structure for reuse C */
26089566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)C,&comm));
26099566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
26109566063dSJacob Faibussowitsch   PetscCall(PetscNew(&abt));
2611cc48ffa7SToby Isaac   abt->tag = tag;
2612faa55883SToby Isaac   abt->alg = alg;
2613faa55883SToby Isaac   switch (alg) {
26144222ddf1SHong Zhang   case 1: /* alg: "cyclic" */
2615cc48ffa7SToby Isaac     for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i]));
2616cc48ffa7SToby Isaac     bufsiz = A->cmap->N * maxRows;
26179566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(bufsiz,&(abt->buf[0]),bufsiz,&(abt->buf[1])));
2618faa55883SToby Isaac     break;
26194222ddf1SHong Zhang   default: /* alg: "allgatherv" */
26209566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &(abt->buf[0]), B->rmap->N * B->cmap->N, &(abt->buf[1])));
26219566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(size,&(abt->recvcounts),size+1,&(abt->recvdispls)));
2622faa55883SToby Isaac     for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N;
2623faa55883SToby Isaac     for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i];
2624faa55883SToby Isaac     break;
2625faa55883SToby Isaac   }
2626cc48ffa7SToby Isaac 
26276718818eSStefano Zampini   C->product->data    = abt;
26286718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense;
26294222ddf1SHong Zhang   C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense;
2630cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2631cc48ffa7SToby Isaac }
2632cc48ffa7SToby Isaac 
2633faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C)
2634cc48ffa7SToby Isaac {
2635cc48ffa7SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
26366718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2637cc48ffa7SToby Isaac   MPI_Comm              comm;
2638cc48ffa7SToby Isaac   PetscMPIInt           rank,size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom;
2639f4259b30SLisandro Dalcin   PetscScalar           *sendbuf, *recvbuf=NULL, *cv;
2640cc48ffa7SToby Isaac   PetscInt              i,cK=A->cmap->N,k,j,bn;
2641cc48ffa7SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2642637a0070SStefano Zampini   const PetscScalar     *av,*bv;
264323fff9afSBarry Smith   PetscBLASInt          cm, cn, ck, alda, blda = 0, clda;
2644cc48ffa7SToby Isaac   MPI_Request           reqs[2];
2645cc48ffa7SToby Isaac   const PetscInt        *ranges;
2646cc48ffa7SToby Isaac 
2647cc48ffa7SToby Isaac   PetscFunctionBegin;
26486718818eSStefano Zampini   MatCheckProduct(C,3);
26495f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
26506718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
26519566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)C,&comm));
26529566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_rank(comm,&rank));
26539566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
26549566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&av));
26559566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(b->A,&bv));
26569566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A,&cv));
26579566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&i));
26589566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&alda));
26599566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(b->A,&i));
26609566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&blda));
26619566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(c->A,&i));
26629566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&clda));
26639566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(B,&ranges));
2664cc48ffa7SToby Isaac   bn   = B->rmap->n;
2665637a0070SStefano Zampini   if (blda == bn) {
2666637a0070SStefano Zampini     sendbuf = (PetscScalar*)bv;
2667cc48ffa7SToby Isaac   } else {
2668cc48ffa7SToby Isaac     sendbuf = abt->buf[0];
2669cc48ffa7SToby Isaac     for (k = 0, i = 0; i < cK; i++) {
2670cc48ffa7SToby Isaac       for (j = 0; j < bn; j++, k++) {
2671637a0070SStefano Zampini         sendbuf[k] = bv[i * blda + j];
2672cc48ffa7SToby Isaac       }
2673cc48ffa7SToby Isaac     }
2674cc48ffa7SToby Isaac   }
2675cc48ffa7SToby Isaac   if (size > 1) {
2676cc48ffa7SToby Isaac     sendto = (rank + size - 1) % size;
2677cc48ffa7SToby Isaac     recvfrom = (rank + size + 1) % size;
2678cc48ffa7SToby Isaac   } else {
2679cc48ffa7SToby Isaac     sendto = recvfrom = 0;
2680cc48ffa7SToby Isaac   }
26819566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(cK,&ck));
26829566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->rmap->n,&cm));
2683cc48ffa7SToby Isaac   recvisfrom = rank;
2684cc48ffa7SToby Isaac   for (i = 0; i < size; i++) {
2685cc48ffa7SToby Isaac     /* we have finished receiving in sending, bufs can be read/modified */
2686cc48ffa7SToby Isaac     PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */
2687cc48ffa7SToby Isaac     PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom];
2688cc48ffa7SToby Isaac 
2689cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2690cc48ffa7SToby Isaac       /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */
2691cc48ffa7SToby Isaac       sendsiz = cK * bn;
2692cc48ffa7SToby Isaac       recvsiz = cK * nextbn;
2693cc48ffa7SToby Isaac       recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1];
26949566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0]));
26959566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1]));
2696cc48ffa7SToby Isaac     }
2697cc48ffa7SToby Isaac 
2698cc48ffa7SToby Isaac     /* local aseq * sendbuf^T */
26999566063dSJacob Faibussowitsch     PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn));
270050ce3c9cSStefano Zampini     if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","T",&cm,&cn,&ck,&_DOne,av,&alda,sendbuf,&cn,&_DZero,cv + clda * ranges[recvisfrom],&clda));
2701cc48ffa7SToby Isaac 
2702cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2703cc48ffa7SToby Isaac       /* wait for the sends and receives to complete, swap sendbuf and recvbuf */
27049566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE));
2705cc48ffa7SToby Isaac     }
2706cc48ffa7SToby Isaac     bn = nextbn;
2707cc48ffa7SToby Isaac     recvisfrom = nextrecvisfrom;
2708cc48ffa7SToby Isaac     sendbuf = recvbuf;
2709cc48ffa7SToby Isaac   }
27109566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&av));
27119566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A,&bv));
27129566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A,&cv));
27139566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
27149566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2715cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2716cc48ffa7SToby Isaac }
2717cc48ffa7SToby Isaac 
2718faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C)
2719faa55883SToby Isaac {
2720faa55883SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
27216718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2722faa55883SToby Isaac   MPI_Comm              comm;
2723637a0070SStefano Zampini   PetscMPIInt           size;
2724637a0070SStefano Zampini   PetscScalar           *cv, *sendbuf, *recvbuf;
2725637a0070SStefano Zampini   const PetscScalar     *av,*bv;
2726637a0070SStefano Zampini   PetscInt              blda,i,cK=A->cmap->N,k,j,bn;
2727faa55883SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2728637a0070SStefano Zampini   PetscBLASInt          cm, cn, ck, alda, clda;
2729faa55883SToby Isaac 
2730faa55883SToby Isaac   PetscFunctionBegin;
27316718818eSStefano Zampini   MatCheckProduct(C,3);
27325f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
27336718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
27349566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A,&comm));
27359566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm,&size));
27369566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A,&av));
27379566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(b->A,&bv));
27389566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A,&cv));
27399566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A,&i));
27409566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&alda));
27419566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(b->A,&blda));
27429566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(c->A,&i));
27439566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i,&clda));
2744faa55883SToby Isaac   /* copy transpose of B into buf[0] */
2745faa55883SToby Isaac   bn      = B->rmap->n;
2746faa55883SToby Isaac   sendbuf = abt->buf[0];
2747faa55883SToby Isaac   recvbuf = abt->buf[1];
2748faa55883SToby Isaac   for (k = 0, j = 0; j < bn; j++) {
2749faa55883SToby Isaac     for (i = 0; i < cK; i++, k++) {
2750637a0070SStefano Zampini       sendbuf[k] = bv[i * blda + j];
2751faa55883SToby Isaac     }
2752faa55883SToby Isaac   }
27539566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A,&bv));
27549566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm));
27559566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(cK,&ck));
27569566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->rmap->n,&cm));
27579566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->cmap->n,&cn));
275850ce3c9cSStefano Zampini   if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","N",&cm,&cn,&ck,&_DOne,av,&alda,recvbuf,&ck,&_DZero,cv,&clda));
27599566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A,&av));
27609566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A,&bv));
27619566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A,&cv));
27629566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY));
27639566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY));
2764faa55883SToby Isaac   PetscFunctionReturn(0);
2765faa55883SToby Isaac }
2766faa55883SToby Isaac 
2767faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C)
2768faa55883SToby Isaac {
27696718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2770faa55883SToby Isaac 
2771faa55883SToby Isaac   PetscFunctionBegin;
27726718818eSStefano Zampini   MatCheckProduct(C,3);
27735f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
27746718818eSStefano Zampini   abt = (Mat_MatTransMultDense*)C->product->data;
2775faa55883SToby Isaac   switch (abt->alg) {
2776faa55883SToby Isaac   case 1:
27779566063dSJacob Faibussowitsch     PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C));
2778faa55883SToby Isaac     break;
2779faa55883SToby Isaac   default:
27809566063dSJacob Faibussowitsch     PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C));
2781faa55883SToby Isaac     break;
2782faa55883SToby Isaac   }
2783faa55883SToby Isaac   PetscFunctionReturn(0);
2784faa55883SToby Isaac }
2785faa55883SToby Isaac 
27866718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data)
2787320f2790SHong Zhang {
27886718818eSStefano Zampini   Mat_MatMultDense *ab = (Mat_MatMultDense*)data;
2789320f2790SHong Zhang 
2790320f2790SHong Zhang   PetscFunctionBegin;
27919566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Ce));
27929566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Ae));
27939566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Be));
27949566063dSJacob Faibussowitsch   PetscCall(PetscFree(ab));
2795320f2790SHong Zhang   PetscFunctionReturn(0);
2796320f2790SHong Zhang }
2797320f2790SHong Zhang 
27985242a7b1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
2799320f2790SHong Zhang PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2800320f2790SHong Zhang {
28016718818eSStefano Zampini   Mat_MatMultDense *ab;
2802320f2790SHong Zhang 
2803320f2790SHong Zhang   PetscFunctionBegin;
28046718818eSStefano Zampini   MatCheckProduct(C,3);
28055f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing product data");
28066718818eSStefano Zampini   ab   = (Mat_MatMultDense*)C->product->data;
28079566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_Elemental(A,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Ae));
28089566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_Elemental(B,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Be));
28099566063dSJacob Faibussowitsch   PetscCall(MatMatMultNumeric_Elemental(ab->Ae,ab->Be,ab->Ce));
28109566063dSJacob Faibussowitsch   PetscCall(MatConvert(ab->Ce,MATMPIDENSE,MAT_REUSE_MATRIX,&C));
2811320f2790SHong Zhang   PetscFunctionReturn(0);
2812320f2790SHong Zhang }
2813320f2790SHong Zhang 
28146718818eSStefano Zampini static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2815320f2790SHong Zhang {
2816320f2790SHong Zhang   Mat              Ae,Be,Ce;
2817320f2790SHong Zhang   Mat_MatMultDense *ab;
2818320f2790SHong Zhang 
2819320f2790SHong Zhang   PetscFunctionBegin;
28206718818eSStefano Zampini   MatCheckProduct(C,4);
28215f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data,PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
28224222ddf1SHong Zhang   /* check local size of A and B */
2823320f2790SHong Zhang   if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend) {
282498921bdaSJacob Faibussowitsch     SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2825320f2790SHong Zhang   }
2826320f2790SHong Zhang 
28274222ddf1SHong Zhang   /* create elemental matrices Ae and Be */
28289566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &Ae));
28299566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(Ae,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N));
28309566063dSJacob Faibussowitsch   PetscCall(MatSetType(Ae,MATELEMENTAL));
28319566063dSJacob Faibussowitsch   PetscCall(MatSetUp(Ae));
28329566063dSJacob Faibussowitsch   PetscCall(MatSetOption(Ae,MAT_ROW_ORIENTED,PETSC_FALSE));
2833320f2790SHong Zhang 
28349566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &Be));
28359566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(Be,PETSC_DECIDE,PETSC_DECIDE,B->rmap->N,B->cmap->N));
28369566063dSJacob Faibussowitsch   PetscCall(MatSetType(Be,MATELEMENTAL));
28379566063dSJacob Faibussowitsch   PetscCall(MatSetUp(Be));
28389566063dSJacob Faibussowitsch   PetscCall(MatSetOption(Be,MAT_ROW_ORIENTED,PETSC_FALSE));
2839320f2790SHong Zhang 
28404222ddf1SHong Zhang   /* compute symbolic Ce = Ae*Be */
28419566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)C),&Ce));
28429566063dSJacob Faibussowitsch   PetscCall(MatMatMultSymbolic_Elemental(Ae,Be,fill,Ce));
28434222ddf1SHong Zhang 
28444222ddf1SHong Zhang   /* setup C */
28459566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C,A->rmap->n,B->cmap->n,PETSC_DECIDE,PETSC_DECIDE));
28469566063dSJacob Faibussowitsch   PetscCall(MatSetType(C,MATDENSE));
28479566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
2848320f2790SHong Zhang 
2849320f2790SHong Zhang   /* create data structure for reuse Cdense */
28509566063dSJacob Faibussowitsch   PetscCall(PetscNew(&ab));
2851320f2790SHong Zhang   ab->Ae = Ae;
2852320f2790SHong Zhang   ab->Be = Be;
2853320f2790SHong Zhang   ab->Ce = Ce;
28546718818eSStefano Zampini 
28556718818eSStefano Zampini   C->product->data    = ab;
28566718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense;
28574222ddf1SHong Zhang   C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense;
2858320f2790SHong Zhang   PetscFunctionReturn(0);
2859320f2790SHong Zhang }
28604222ddf1SHong Zhang #endif
28614222ddf1SHong Zhang /* ----------------------------------------------- */
28624222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
28634222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C)
2864320f2790SHong Zhang {
2865320f2790SHong Zhang   PetscFunctionBegin;
28664222ddf1SHong Zhang   C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense;
28674222ddf1SHong Zhang   C->ops->productsymbolic = MatProductSymbolic_AB;
2868320f2790SHong Zhang   PetscFunctionReturn(0);
2869320f2790SHong Zhang }
28705242a7b1SHong Zhang #endif
287186aefd0dSHong Zhang 
28724222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C)
28734222ddf1SHong Zhang {
28744222ddf1SHong Zhang   Mat_Product *product = C->product;
28754222ddf1SHong Zhang   Mat         A = product->A,B=product->B;
28764222ddf1SHong Zhang 
28774222ddf1SHong Zhang   PetscFunctionBegin;
28784222ddf1SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend)
287998921bdaSJacob Faibussowitsch     SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
28806718818eSStefano Zampini   C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense;
28816718818eSStefano Zampini   C->ops->productsymbolic = MatProductSymbolic_AtB;
28824222ddf1SHong Zhang   PetscFunctionReturn(0);
28834222ddf1SHong Zhang }
28844222ddf1SHong Zhang 
28854222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C)
28864222ddf1SHong Zhang {
28874222ddf1SHong Zhang   Mat_Product    *product = C->product;
28884222ddf1SHong Zhang   const char     *algTypes[2] = {"allgatherv","cyclic"};
28894222ddf1SHong Zhang   PetscInt       alg,nalg = 2;
28904222ddf1SHong Zhang   PetscBool      flg = PETSC_FALSE;
28914222ddf1SHong Zhang 
28924222ddf1SHong Zhang   PetscFunctionBegin;
28934222ddf1SHong Zhang   /* Set default algorithm */
28944222ddf1SHong Zhang   alg = 0; /* default is allgatherv */
28959566063dSJacob Faibussowitsch   PetscCall(PetscStrcmp(product->alg,"default",&flg));
28964222ddf1SHong Zhang   if (flg) {
28979566063dSJacob Faibussowitsch     PetscCall(MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]));
28984222ddf1SHong Zhang   }
28994222ddf1SHong Zhang 
29004222ddf1SHong Zhang   /* Get runtime option */
29014222ddf1SHong Zhang   if (product->api_user) {
2902d0609cedSBarry Smith     PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatMatTransposeMult","Mat");
29039566063dSJacob Faibussowitsch     PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via","Algorithmic approach","MatMatTransposeMult",algTypes,nalg,algTypes[alg],&alg,&flg));
2904d0609cedSBarry Smith     PetscOptionsEnd();
29054222ddf1SHong Zhang   } else {
2906d0609cedSBarry Smith     PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatProduct_ABt","Mat");
29079566063dSJacob Faibussowitsch     PetscCall(PetscOptionsEList("-mat_product_algorithm","Algorithmic approach","MatProduct_ABt",algTypes,nalg,algTypes[alg],&alg,&flg));
2908d0609cedSBarry Smith     PetscOptionsEnd();
29094222ddf1SHong Zhang   }
29104222ddf1SHong Zhang   if (flg) {
29119566063dSJacob Faibussowitsch     PetscCall(MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]));
29124222ddf1SHong Zhang   }
29134222ddf1SHong Zhang 
29144222ddf1SHong Zhang   C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense;
29154222ddf1SHong Zhang   C->ops->productsymbolic          = MatProductSymbolic_ABt;
29164222ddf1SHong Zhang   PetscFunctionReturn(0);
29174222ddf1SHong Zhang }
29184222ddf1SHong Zhang 
29194222ddf1SHong Zhang PETSC_INTERN PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C)
29204222ddf1SHong Zhang {
29214222ddf1SHong Zhang   Mat_Product    *product = C->product;
29224222ddf1SHong Zhang 
29234222ddf1SHong Zhang   PetscFunctionBegin;
29244222ddf1SHong Zhang   switch (product->type) {
29254222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
29264222ddf1SHong Zhang   case MATPRODUCT_AB:
29279566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_MPIDense_AB(C));
29284222ddf1SHong Zhang     break;
29294222ddf1SHong Zhang #endif
29304222ddf1SHong Zhang   case MATPRODUCT_AtB:
29319566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_MPIDense_AtB(C));
29324222ddf1SHong Zhang     break;
29334222ddf1SHong Zhang   case MATPRODUCT_ABt:
29349566063dSJacob Faibussowitsch     PetscCall(MatProductSetFromOptions_MPIDense_ABt(C));
29354222ddf1SHong Zhang     break;
29366718818eSStefano Zampini   default:
29376718818eSStefano Zampini     break;
29384222ddf1SHong Zhang   }
29394222ddf1SHong Zhang   PetscFunctionReturn(0);
29404222ddf1SHong Zhang }
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