1ed3cc1f0SBarry Smith /* 2ed3cc1f0SBarry Smith Basic functions for basic parallel dense matrices. 347d993e7Ssuyashtn Portions of this code are under: 447d993e7Ssuyashtn Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved. 5ed3cc1f0SBarry Smith */ 6ed3cc1f0SBarry Smith 7c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h> /*I "petscmat.h" I*/ 88949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h> 9baa3c1c6SHong Zhang #include <petscblaslapack.h> 104186a4bbSPierre Jolivet #include <petsc/private/vecimpl.h> 11d016bddeSToby Isaac #include <petscdevice.h> 12d016bddeSToby Isaac #include <petsc/private/deviceimpl.h> 138965ea79SLois Curfman McInnes 14ab92ecdeSBarry Smith /*@ 1511a5261eSBarry Smith MatDenseGetLocalMatrix - For a `MATMPIDENSE` or `MATSEQDENSE` matrix returns the sequential 16ab92ecdeSBarry Smith matrix that represents the operator. For sequential matrices it returns itself. 17ab92ecdeSBarry Smith 18ab92ecdeSBarry Smith Input Parameter: 192ef1f0ffSBarry Smith . A - the sequential or MPI `MATDENSE` matrix 20ab92ecdeSBarry Smith 21ab92ecdeSBarry Smith Output Parameter: 22ab92ecdeSBarry Smith . B - the inner matrix 23ab92ecdeSBarry Smith 248e6c10adSSatish Balay Level: intermediate 258e6c10adSSatish Balay 261cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MATMPIDENSE`, `MATSEQDENSE` 27ab92ecdeSBarry Smith @*/ 28d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetLocalMatrix(Mat A, Mat *B) 29d71ae5a4SJacob Faibussowitsch { 30ab92ecdeSBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 31ace3abfcSBarry Smith PetscBool flg; 32ab92ecdeSBarry Smith 33ab92ecdeSBarry Smith PetscFunctionBegin; 34d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 354f572ea9SToby Isaac PetscAssertPointer(B, 2); 369566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATMPIDENSE, &flg)); 372205254eSKarl Rupp if (flg) *B = mat->A; 38f140bc17SStefano Zampini else { 399566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATSEQDENSE, &flg)); 4028b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for matrix type %s", ((PetscObject)A)->type_name); 41f140bc17SStefano Zampini *B = A; 42f140bc17SStefano Zampini } 433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 44ab92ecdeSBarry Smith } 45ab92ecdeSBarry Smith 4666976f2fSJacob Faibussowitsch static PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s) 47d71ae5a4SJacob Faibussowitsch { 48a76f77c3SStefano Zampini Mat_MPIDense *Amat = (Mat_MPIDense *)A->data; 49a76f77c3SStefano Zampini Mat_MPIDense *Bmat = (Mat_MPIDense *)B->data; 50a76f77c3SStefano Zampini 51a76f77c3SStefano Zampini PetscFunctionBegin; 529566063dSJacob Faibussowitsch PetscCall(MatCopy(Amat->A, Bmat->A, s)); 533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 54a76f77c3SStefano Zampini } 55a76f77c3SStefano Zampini 56d71ae5a4SJacob Faibussowitsch PetscErrorCode MatShift_MPIDense(Mat A, PetscScalar alpha) 57d71ae5a4SJacob Faibussowitsch { 582f605a99SJose E. Roman Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 592f605a99SJose E. Roman PetscInt j, lda, rstart = A->rmap->rstart, rend = A->rmap->rend, rend2; 602f605a99SJose E. Roman PetscScalar *v; 612f605a99SJose E. Roman 622f605a99SJose E. Roman PetscFunctionBegin; 632f605a99SJose E. Roman PetscCall(MatDenseGetArray(mat->A, &v)); 642f605a99SJose E. Roman PetscCall(MatDenseGetLDA(mat->A, &lda)); 652f605a99SJose E. Roman rend2 = PetscMin(rend, A->cmap->N); 662f605a99SJose E. Roman if (rend2 > rstart) { 672f605a99SJose E. Roman for (j = rstart; j < rend2; j++) v[j - rstart + j * lda] += alpha; 682f605a99SJose E. Roman PetscCall(PetscLogFlops(rend2 - rstart)); 692f605a99SJose E. Roman } 702f605a99SJose E. Roman PetscCall(MatDenseRestoreArray(mat->A, &v)); 713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 722f605a99SJose E. Roman } 732f605a99SJose E. Roman 7466976f2fSJacob Faibussowitsch static PetscErrorCode MatGetRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 75d71ae5a4SJacob Faibussowitsch { 76ba8c8a56SBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 77d0f46423SBarry Smith PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 78ba8c8a56SBarry Smith 79ba8c8a56SBarry Smith PetscFunctionBegin; 80aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 81ba8c8a56SBarry Smith lrow = row - rstart; 829566063dSJacob Faibussowitsch PetscCall(MatGetRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 84ba8c8a56SBarry Smith } 85ba8c8a56SBarry Smith 8666976f2fSJacob Faibussowitsch static PetscErrorCode MatRestoreRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 87d71ae5a4SJacob Faibussowitsch { 88637a0070SStefano Zampini Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 89637a0070SStefano Zampini PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 90ba8c8a56SBarry Smith 91ba8c8a56SBarry Smith PetscFunctionBegin; 92aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 93637a0070SStefano Zampini lrow = row - rstart; 949566063dSJacob Faibussowitsch PetscCall(MatRestoreRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 96ba8c8a56SBarry Smith } 97ba8c8a56SBarry Smith 9866976f2fSJacob Faibussowitsch static PetscErrorCode MatGetDiagonalBlock_MPIDense(Mat A, Mat *a) 99d71ae5a4SJacob Faibussowitsch { 1000de54da6SSatish Balay Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 101d0f46423SBarry Smith PetscInt m = A->rmap->n, rstart = A->rmap->rstart; 10287828ca2SBarry Smith PetscScalar *array; 1030de54da6SSatish Balay MPI_Comm comm; 1044b6ae80fSStefano Zampini PetscBool flg; 10511bd1e4dSLisandro Dalcin Mat B; 1060de54da6SSatish Balay 1070de54da6SSatish Balay PetscFunctionBegin; 1089566063dSJacob Faibussowitsch PetscCall(MatHasCongruentLayouts(A, &flg)); 10928b400f6SJacob Faibussowitsch PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only square matrices supported."); 1109566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery((PetscObject)A, "DiagonalBlock", (PetscObject *)&B)); 111616b8fbbSStefano Zampini if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */ 112a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 1139566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSECUDA, &flg)); 11428b400f6SJacob Faibussowitsch PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSECUDA); 115a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 11647d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSEHIP, &flg)); 11747d993e7Ssuyashtn PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSEHIP); 11847d993e7Ssuyashtn #endif 119f4f49eeaSPierre Jolivet PetscCall(PetscObjectGetComm((PetscObject)mdn->A, &comm)); 1209566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &B)); 1219566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, m, m, m, m)); 1229566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)mdn->A)->type_name)); 1239566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, (const PetscScalar **)&array)); 1249566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(B, array + m * rstart)); 1259566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, (const PetscScalar **)&array)); 1269566063dSJacob Faibussowitsch PetscCall(PetscObjectCompose((PetscObject)A, "DiagonalBlock", (PetscObject)B)); 12711bd1e4dSLisandro Dalcin *a = B; 1289566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 1292205254eSKarl Rupp } else *a = B; 1303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1310de54da6SSatish Balay } 1320de54da6SSatish Balay 13366976f2fSJacob Faibussowitsch static PetscErrorCode MatSetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv) 134d71ae5a4SJacob Faibussowitsch { 13539b7565bSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)mat->data; 136d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 137ace3abfcSBarry Smith PetscBool roworiented = A->roworiented; 1388965ea79SLois Curfman McInnes 1393a40ed3dSBarry Smith PetscFunctionBegin; 1408965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 1415ef9f2a5SBarry Smith if (idxm[i] < 0) continue; 14208401ef6SPierre Jolivet PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 1438965ea79SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 1448965ea79SLois Curfman McInnes row = idxm[i] - rstart; 14539b7565bSBarry Smith if (roworiented) { 146de0a9f35SPierre Jolivet PetscCall(MatSetValues(A->A, 1, &row, n, idxn, PetscSafePointerPlusOffset(v, i * n), addv)); 1473a40ed3dSBarry Smith } else { 1488965ea79SLois Curfman McInnes for (j = 0; j < n; j++) { 1495ef9f2a5SBarry Smith if (idxn[j] < 0) continue; 15008401ef6SPierre Jolivet PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 151de0a9f35SPierre Jolivet PetscCall(MatSetValues(A->A, 1, &row, 1, &idxn[j], PetscSafePointerPlusOffset(v, i + j * m), addv)); 15239b7565bSBarry Smith } 1538965ea79SLois Curfman McInnes } 1542205254eSKarl Rupp } else if (!A->donotstash) { 1555080c13bSMatthew G Knepley mat->assembled = PETSC_FALSE; 15639b7565bSBarry Smith if (roworiented) { 157de0a9f35SPierre Jolivet PetscCall(MatStashValuesRow_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i * n), PETSC_FALSE)); 158d36fbae8SSatish Balay } else { 159de0a9f35SPierre Jolivet PetscCall(MatStashValuesCol_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i), m, PETSC_FALSE)); 16039b7565bSBarry Smith } 161b49de8d1SLois Curfman McInnes } 162b49de8d1SLois Curfman McInnes } 1633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 164b49de8d1SLois Curfman McInnes } 165b49de8d1SLois Curfman McInnes 16666976f2fSJacob Faibussowitsch static PetscErrorCode MatGetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], PetscScalar v[]) 167d71ae5a4SJacob Faibussowitsch { 168b49de8d1SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 169d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 170b49de8d1SLois Curfman McInnes 1713a40ed3dSBarry Smith PetscFunctionBegin; 172b49de8d1SLois Curfman McInnes for (i = 0; i < m; i++) { 17354c59aa7SJacob Faibussowitsch if (idxm[i] < 0) continue; /* negative row */ 17454c59aa7SJacob Faibussowitsch PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 175b49de8d1SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 176b49de8d1SLois Curfman McInnes row = idxm[i] - rstart; 177b49de8d1SLois Curfman McInnes for (j = 0; j < n; j++) { 17854c59aa7SJacob Faibussowitsch if (idxn[j] < 0) continue; /* negative column */ 17954c59aa7SJacob Faibussowitsch PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1809566063dSJacob Faibussowitsch PetscCall(MatGetValues(mdn->A, 1, &row, 1, &idxn[j], v + i * n + j)); 181b49de8d1SLois Curfman McInnes } 182e7e72b3dSBarry Smith } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Only local values currently supported"); 1838965ea79SLois Curfman McInnes } 1843ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1858965ea79SLois Curfman McInnes } 1868965ea79SLois Curfman McInnes 187d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A, PetscInt *lda) 188d71ae5a4SJacob Faibussowitsch { 18949a6ff4bSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 19049a6ff4bSBarry Smith 19149a6ff4bSBarry Smith PetscFunctionBegin; 1929566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, lda)); 1933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19449a6ff4bSBarry Smith } 19549a6ff4bSBarry Smith 196d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A, PetscInt lda) 197d71ae5a4SJacob Faibussowitsch { 198ad16ce7aSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 19947d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 200ad16ce7aSStefano Zampini 201ad16ce7aSStefano Zampini PetscFunctionBegin; 20217359960SJose E. Roman if (!a->A) { 20328b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2049566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 2059566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 2069566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 2079566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N)); 208a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 20947d993e7Ssuyashtn PetscBool iscuda; 2109566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda)); 21147d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 212a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 21347d993e7Ssuyashtn PetscBool iship; 21447d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSEHIP, &iship)); 21547d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 21647d993e7Ssuyashtn #endif 21747d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 21817359960SJose E. Roman } 2199566063dSJacob Faibussowitsch PetscCall(MatDenseSetLDA(a->A, lda)); 2203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 221ad16ce7aSStefano Zampini } 222ad16ce7aSStefano Zampini 223d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArray_MPIDense(Mat A, PetscScalar **array) 224d71ae5a4SJacob Faibussowitsch { 225ff14e315SSatish Balay Mat_MPIDense *a = (Mat_MPIDense *)A->data; 226ff14e315SSatish Balay 2273a40ed3dSBarry Smith PetscFunctionBegin; 22828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2299566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, array)); 2303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 231ff14e315SSatish Balay } 232ff14e315SSatish Balay 233f1e99121SPierre Jolivet static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A, PetscScalar **array) 234d71ae5a4SJacob Faibussowitsch { 2358572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2368572280aSBarry Smith 2378572280aSBarry Smith PetscFunctionBegin; 23828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 239f1e99121SPierre Jolivet PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)array)); 2403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2418572280aSBarry Smith } 2428572280aSBarry Smith 243d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A, PetscScalar **array) 244d71ae5a4SJacob Faibussowitsch { 2456947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2466947451fSStefano Zampini 2476947451fSStefano Zampini PetscFunctionBegin; 24828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2499566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, array)); 2503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2516947451fSStefano Zampini } 2526947451fSStefano Zampini 253d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A, const PetscScalar *array) 254d71ae5a4SJacob Faibussowitsch { 255d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 256d3042a70SBarry Smith 257d3042a70SBarry Smith PetscFunctionBegin; 25828b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 25928b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2609566063dSJacob Faibussowitsch PetscCall(MatDensePlaceArray(a->A, array)); 2613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 262d3042a70SBarry Smith } 263d3042a70SBarry Smith 264d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseResetArray_MPIDense(Mat A) 265d71ae5a4SJacob Faibussowitsch { 266d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 267d3042a70SBarry Smith 268d3042a70SBarry Smith PetscFunctionBegin; 26928b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 27028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2719566063dSJacob Faibussowitsch PetscCall(MatDenseResetArray(a->A)); 2723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 273d3042a70SBarry Smith } 274d3042a70SBarry Smith 275d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A, const PetscScalar *array) 276d71ae5a4SJacob Faibussowitsch { 277d5ea218eSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 278d5ea218eSStefano Zampini 279d5ea218eSStefano Zampini PetscFunctionBegin; 28028b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 28128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2829566063dSJacob Faibussowitsch PetscCall(MatDenseReplaceArray(a->A, array)); 2833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 284d5ea218eSStefano Zampini } 285d5ea218eSStefano Zampini 286d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A, IS isrow, IS iscol, MatReuse scall, Mat *B) 287d71ae5a4SJacob Faibussowitsch { 288ca3fa75bSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data, *newmatd; 289637a0070SStefano Zampini PetscInt lda, i, j, rstart, rend, nrows, ncols, Ncols, nlrows, nlcols; 2905d0c19d7SBarry Smith const PetscInt *irow, *icol; 291637a0070SStefano Zampini const PetscScalar *v; 292637a0070SStefano Zampini PetscScalar *bv; 293ca3fa75bSLois Curfman McInnes Mat newmat; 2944aa3045dSJed Brown IS iscol_local; 29542a884f0SBarry Smith MPI_Comm comm_is, comm_mat; 296ca3fa75bSLois Curfman McInnes 297ca3fa75bSLois Curfman McInnes PetscFunctionBegin; 2989566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm_mat)); 2999566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)iscol, &comm_is)); 30008401ef6SPierre Jolivet PetscCheck(comm_mat == comm_is, PETSC_COMM_SELF, PETSC_ERR_ARG_NOTSAMECOMM, "IS communicator must match matrix communicator"); 30142a884f0SBarry Smith 3029566063dSJacob Faibussowitsch PetscCall(ISAllGather(iscol, &iscol_local)); 3039566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &irow)); 3049566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol_local, &icol)); 3059566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(isrow, &nrows)); 3069566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(iscol, &ncols)); 3079566063dSJacob Faibussowitsch PetscCall(ISGetSize(iscol, &Ncols)); /* global number of columns, size of iscol_local */ 308ca3fa75bSLois Curfman McInnes 309ca3fa75bSLois Curfman McInnes /* No parallel redistribution currently supported! Should really check each index set 310da81f932SPierre Jolivet to confirm that it is OK. ... Currently supports only submatrix same partitioning as 3117eba5e9cSLois Curfman McInnes original matrix! */ 312ca3fa75bSLois Curfman McInnes 3139566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &nlrows, &nlcols)); 3149566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRange(A, &rstart, &rend)); 315ca3fa75bSLois Curfman McInnes 316ca3fa75bSLois Curfman McInnes /* Check submatrix call */ 317ca3fa75bSLois Curfman McInnes if (scall == MAT_REUSE_MATRIX) { 318e32f2f54SBarry Smith /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */ 3197eba5e9cSLois Curfman McInnes /* Really need to test rows and column sizes! */ 320ca3fa75bSLois Curfman McInnes newmat = *B; 321ca3fa75bSLois Curfman McInnes } else { 322ca3fa75bSLois Curfman McInnes /* Create and fill new matrix */ 3239566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &newmat)); 3249566063dSJacob Faibussowitsch PetscCall(MatSetSizes(newmat, nrows, ncols, PETSC_DECIDE, Ncols)); 3259566063dSJacob Faibussowitsch PetscCall(MatSetType(newmat, ((PetscObject)A)->type_name)); 3269566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(newmat, NULL)); 327ca3fa75bSLois Curfman McInnes } 328ca3fa75bSLois Curfman McInnes 329ca3fa75bSLois Curfman McInnes /* Now extract the data pointers and do the copy, column at a time */ 330ca3fa75bSLois Curfman McInnes newmatd = (Mat_MPIDense *)newmat->data; 3319566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(newmatd->A, &bv)); 3329566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mat->A, &v)); 3339566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mat->A, &lda)); 3344aa3045dSJed Brown for (i = 0; i < Ncols; i++) { 335637a0070SStefano Zampini const PetscScalar *av = v + lda * icol[i]; 336ad540459SPierre Jolivet for (j = 0; j < nrows; j++) *bv++ = av[irow[j] - rstart]; 337ca3fa75bSLois Curfman McInnes } 3389566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mat->A, &v)); 3399566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(newmatd->A, &bv)); 340ca3fa75bSLois Curfman McInnes 341ca3fa75bSLois Curfman McInnes /* Assemble the matrices so that the correct flags are set */ 3429566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(newmat, MAT_FINAL_ASSEMBLY)); 3439566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(newmat, MAT_FINAL_ASSEMBLY)); 344ca3fa75bSLois Curfman McInnes 345ca3fa75bSLois Curfman McInnes /* Free work space */ 3469566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &irow)); 3479566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol_local, &icol)); 3489566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iscol_local)); 349ca3fa75bSLois Curfman McInnes *B = newmat; 3503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 351ca3fa75bSLois Curfman McInnes } 352ca3fa75bSLois Curfman McInnes 35366976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A, PetscScalar **array) 354d71ae5a4SJacob Faibussowitsch { 35573a71a0fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 35673a71a0fSBarry Smith 3573a40ed3dSBarry Smith PetscFunctionBegin; 3589566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, array)); 3593ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 360ff14e315SSatish Balay } 361ff14e315SSatish Balay 362f1e99121SPierre Jolivet static PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A, PetscScalar **array) 363d71ae5a4SJacob Faibussowitsch { 3648572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3658572280aSBarry Smith 3668572280aSBarry Smith PetscFunctionBegin; 367f1e99121SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)array)); 3683ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3698572280aSBarry Smith } 3708572280aSBarry Smith 37166976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A, PetscScalar **array) 372d71ae5a4SJacob Faibussowitsch { 3736947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3746947451fSStefano Zampini 3756947451fSStefano Zampini PetscFunctionBegin; 3769566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, array)); 3773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3786947451fSStefano Zampini } 3796947451fSStefano Zampini 38066976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat, MatAssemblyType mode) 381d71ae5a4SJacob Faibussowitsch { 38239ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 38313f74950SBarry Smith PetscInt nstash, reallocs; 3848965ea79SLois Curfman McInnes 3853a40ed3dSBarry Smith PetscFunctionBegin; 3863ba16761SJacob Faibussowitsch if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(PETSC_SUCCESS); 3878965ea79SLois Curfman McInnes 3889566063dSJacob Faibussowitsch PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); 3899566063dSJacob Faibussowitsch PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); 3909566063dSJacob Faibussowitsch PetscCall(PetscInfo(mdn->A, "Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n", nstash, reallocs)); 3913ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3928965ea79SLois Curfman McInnes } 3938965ea79SLois Curfman McInnes 39466976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat, MatAssemblyType mode) 395d71ae5a4SJacob Faibussowitsch { 39639ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 39713f74950SBarry Smith PetscInt i, *row, *col, flg, j, rstart, ncols; 39813f74950SBarry Smith PetscMPIInt n; 39987828ca2SBarry Smith PetscScalar *val; 4008965ea79SLois Curfman McInnes 4013a40ed3dSBarry Smith PetscFunctionBegin; 402910cf402Sprj- if (!mdn->donotstash && !mat->nooffprocentries) { 4038965ea79SLois Curfman McInnes /* wait on receives */ 4047ef1d9bdSSatish Balay while (1) { 4059566063dSJacob Faibussowitsch PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); 4067ef1d9bdSSatish Balay if (!flg) break; 4078965ea79SLois Curfman McInnes 4087ef1d9bdSSatish Balay for (i = 0; i < n;) { 4097ef1d9bdSSatish Balay /* Now identify the consecutive vals belonging to the same row */ 4102205254eSKarl Rupp for (j = i, rstart = row[j]; j < n; j++) { 4112205254eSKarl Rupp if (row[j] != rstart) break; 4122205254eSKarl Rupp } 4137ef1d9bdSSatish Balay if (j < n) ncols = j - i; 4147ef1d9bdSSatish Balay else ncols = n - i; 4157ef1d9bdSSatish Balay /* Now assemble all these values with a single function call */ 4169566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(mat, 1, row + i, ncols, col + i, val + i, mat->insertmode)); 4177ef1d9bdSSatish Balay i = j; 4188965ea79SLois Curfman McInnes } 4197ef1d9bdSSatish Balay } 4209566063dSJacob Faibussowitsch PetscCall(MatStashScatterEnd_Private(&mat->stash)); 421910cf402Sprj- } 4228965ea79SLois Curfman McInnes 4239566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mdn->A, mode)); 4249566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mdn->A, mode)); 4253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4268965ea79SLois Curfman McInnes } 4278965ea79SLois Curfman McInnes 42866976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroEntries_MPIDense(Mat A) 429d71ae5a4SJacob Faibussowitsch { 43039ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 4313a40ed3dSBarry Smith 4323a40ed3dSBarry Smith PetscFunctionBegin; 4339566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(l->A)); 4343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4358965ea79SLois Curfman McInnes } 4368965ea79SLois Curfman McInnes 43766976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroRows_MPIDense(Mat A, PetscInt n, const PetscInt rows[], PetscScalar diag, Vec x, Vec b) 438d71ae5a4SJacob Faibussowitsch { 43939ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 440637a0070SStefano Zampini PetscInt i, len, *lrows; 441637a0070SStefano Zampini 442637a0070SStefano Zampini PetscFunctionBegin; 443637a0070SStefano Zampini /* get locally owned rows */ 4449566063dSJacob Faibussowitsch PetscCall(PetscLayoutMapLocal(A->rmap, n, rows, &len, &lrows, NULL)); 445dd8e379bSPierre Jolivet /* fix right-hand side if needed */ 446637a0070SStefano Zampini if (x && b) { 44797b48c8fSBarry Smith const PetscScalar *xx; 44897b48c8fSBarry Smith PetscScalar *bb; 4498965ea79SLois Curfman McInnes 4509566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(x, &xx)); 4519566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(b, &bb)); 452637a0070SStefano Zampini for (i = 0; i < len; ++i) bb[lrows[i]] = diag * xx[lrows[i]]; 4539566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(x, &xx)); 4549566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(b, &bb)); 45597b48c8fSBarry Smith } 4569566063dSJacob Faibussowitsch PetscCall(MatZeroRows(l->A, len, lrows, 0.0, NULL, NULL)); 457e2eb51b1SBarry Smith if (diag != 0.0) { 458637a0070SStefano Zampini Vec d; 459b9679d65SBarry Smith 4609566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A, NULL, &d)); 4619566063dSJacob Faibussowitsch PetscCall(VecSet(d, diag)); 4629566063dSJacob Faibussowitsch PetscCall(MatDiagonalSet(A, d, INSERT_VALUES)); 4639566063dSJacob Faibussowitsch PetscCall(VecDestroy(&d)); 464b9679d65SBarry Smith } 4659566063dSJacob Faibussowitsch PetscCall(PetscFree(lrows)); 4663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4678965ea79SLois Curfman McInnes } 4688965ea79SLois Curfman McInnes 4690be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat, Vec, Vec); 4700be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat, Vec, Vec, Vec); 4710be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat, Vec, Vec); 4720be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat, Vec, Vec, Vec); 4730be0d8bdSHansol Suh 474d016bddeSToby Isaac static PetscErrorCode MatMultColumnRange_MPIDense(Mat mat, Vec xx, Vec yy, PetscInt c_start, PetscInt c_end) 475d016bddeSToby Isaac { 476d016bddeSToby Isaac Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 477d016bddeSToby Isaac const PetscScalar *ax; 478d016bddeSToby Isaac PetscScalar *ay; 479d016bddeSToby Isaac PetscMemType axmtype, aymtype; 480d016bddeSToby Isaac 481d016bddeSToby Isaac PetscFunctionBegin; 482d016bddeSToby Isaac if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 483d016bddeSToby Isaac PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 484d016bddeSToby Isaac PetscCall(VecGetArrayWriteAndMemType(mdn->lvec, &ay, &aymtype)); 485d016bddeSToby Isaac PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 486d016bddeSToby Isaac PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 487d016bddeSToby Isaac PetscCall(VecRestoreArrayWriteAndMemType(mdn->lvec, &ay)); 488d016bddeSToby Isaac PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 489d016bddeSToby Isaac PetscUseMethod(mdn->A, "MatMultColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (mdn->A, mdn->lvec, yy, c_start, c_end)); 490d016bddeSToby Isaac PetscFunctionReturn(PETSC_SUCCESS); 491d016bddeSToby Isaac } 492d016bddeSToby Isaac 49366976f2fSJacob Faibussowitsch static PetscErrorCode MatMult_MPIDense(Mat mat, Vec xx, Vec yy) 494d71ae5a4SJacob Faibussowitsch { 49539ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 496637a0070SStefano Zampini const PetscScalar *ax; 497637a0070SStefano Zampini PetscScalar *ay; 498d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 499c456f294SBarry Smith 5003a40ed3dSBarry Smith PetscFunctionBegin; 5016f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5029566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 503d016bddeSToby Isaac PetscCall(VecGetArrayWriteAndMemType(mdn->lvec, &ay, &aymtype)); 5049566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5059566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 506d016bddeSToby Isaac PetscCall(VecRestoreArrayWriteAndMemType(mdn->lvec, &ay)); 5079566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5089566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->mult)(mdn->A, mdn->lvec, yy)); 5093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5108965ea79SLois Curfman McInnes } 5118965ea79SLois Curfman McInnes 5120be0d8bdSHansol Suh static PetscErrorCode MatMultAddColumnRange_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz, PetscInt c_start, PetscInt c_end) 5130be0d8bdSHansol Suh { 5140be0d8bdSHansol Suh Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 5150be0d8bdSHansol Suh const PetscScalar *ax; 5160be0d8bdSHansol Suh PetscScalar *ay; 5170be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 5180be0d8bdSHansol Suh 5190be0d8bdSHansol Suh PetscFunctionBegin; 5200be0d8bdSHansol Suh if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5210be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 5220be0d8bdSHansol Suh PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 5230be0d8bdSHansol Suh PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5240be0d8bdSHansol Suh PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 5250be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 5260be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5270be0d8bdSHansol Suh PetscUseMethod(mdn->A, "MatMultAddColumnRange_C", (Mat, Vec, Vec, Vec, PetscInt, PetscInt), (mdn->A, mdn->lvec, yy, zz, c_start, c_end)); 5280be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 5290be0d8bdSHansol Suh } 5300be0d8bdSHansol Suh 53166976f2fSJacob Faibussowitsch static PetscErrorCode MatMultAdd_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz) 532d71ae5a4SJacob Faibussowitsch { 53339ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 534637a0070SStefano Zampini const PetscScalar *ax; 535637a0070SStefano Zampini PetscScalar *ay; 536d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 537c456f294SBarry Smith 5383a40ed3dSBarry Smith PetscFunctionBegin; 5396f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5409566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 5419566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 5429566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5439566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 5449566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 5459566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5469566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->multadd)(mdn->A, mdn->lvec, yy, zz)); 5473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5488965ea79SLois Curfman McInnes } 5498965ea79SLois Curfman McInnes 5500be0d8bdSHansol Suh static PetscErrorCode MatMultHermitianTransposeColumnRange_MPIDense(Mat A, Vec xx, Vec yy, PetscInt c_start, PetscInt c_end) 5510be0d8bdSHansol Suh { 5520be0d8bdSHansol Suh Mat_MPIDense *a = (Mat_MPIDense *)A->data; 5530be0d8bdSHansol Suh const PetscScalar *ax; 5540be0d8bdSHansol Suh PetscScalar *ay; 5550be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 556d016bddeSToby Isaac PetscInt r_start, r_end; 557d016bddeSToby Isaac PetscInt c_start_local, c_end_local; 5580be0d8bdSHansol Suh 5590be0d8bdSHansol Suh PetscFunctionBegin; 5600be0d8bdSHansol Suh if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 561d016bddeSToby Isaac PetscCall(VecZeroEntries(a->lvec)); 562d016bddeSToby Isaac PetscCall(VecGetOwnershipRange(yy, &r_start, &r_end)); 563d016bddeSToby Isaac c_start_local = PetscMax(c_start, r_start); 564d016bddeSToby Isaac c_end_local = PetscMin(c_end, r_end); 565d016bddeSToby Isaac PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 566d016bddeSToby Isaac if (c_end_local > c_start_local) { 567d016bddeSToby Isaac if (PetscMemTypeHost(aymtype)) { 568d016bddeSToby Isaac PetscCall(PetscArrayzero(&ay[c_start_local], (size_t)(c_end_local - c_start_local))); 569d016bddeSToby Isaac } else { 570d016bddeSToby Isaac PetscCall(PetscDeviceRegisterMemory(ay, aymtype, sizeof(*ay) * ((size_t)(r_end - r_start)))); 571d016bddeSToby Isaac PetscCall(PetscDeviceArrayZero(NULL, &ay[c_start_local], (size_t)(c_end_local - c_start_local))); 572d016bddeSToby Isaac } 573d016bddeSToby Isaac } 5740be0d8bdSHansol Suh PetscUseMethod(a->A, "MatMultHermitianTransposeColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (a->A, xx, a->lvec, c_start, c_end)); 5750be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5760be0d8bdSHansol Suh PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5770be0d8bdSHansol Suh PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5780be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5790be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 5800be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 5810be0d8bdSHansol Suh } 5820be0d8bdSHansol Suh 583459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeKernel_MPIDense(Mat A, Vec xx, Vec yy, PetscBool herm) 584d71ae5a4SJacob Faibussowitsch { 585096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 586637a0070SStefano Zampini const PetscScalar *ax; 587637a0070SStefano Zampini PetscScalar *ay; 588d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 5894d86920dSPierre Jolivet 5903a40ed3dSBarry Smith PetscFunctionBegin; 5916f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 5929566063dSJacob Faibussowitsch PetscCall(VecSet(yy, 0.0)); 593459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 594459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 5959566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5969566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 5979566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5989566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5999566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 6009566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 6013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 602096963f5SLois Curfman McInnes } 603096963f5SLois Curfman McInnes 6040be0d8bdSHansol Suh static PetscErrorCode MatMultHermitianTransposeAddColumnRange_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscInt c_start, PetscInt c_end) 6050be0d8bdSHansol Suh { 6060be0d8bdSHansol Suh Mat_MPIDense *a = (Mat_MPIDense *)A->data; 6070be0d8bdSHansol Suh const PetscScalar *ax; 6080be0d8bdSHansol Suh PetscScalar *ay; 6090be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 6100be0d8bdSHansol Suh 6110be0d8bdSHansol Suh PetscFunctionBegin; 6120be0d8bdSHansol Suh if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 6130be0d8bdSHansol Suh PetscCall(VecCopy(yy, zz)); 614d016bddeSToby Isaac PetscCall(VecZeroEntries(a->lvec)); 6150be0d8bdSHansol Suh PetscUseMethod(a->A, "MatMultHermitianTransposeColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (a->A, xx, a->lvec, c_start, c_end)); 6160be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 6170be0d8bdSHansol Suh PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 6180be0d8bdSHansol Suh PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 6190be0d8bdSHansol Suh PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 6200be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 6210be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 6220be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 6230be0d8bdSHansol Suh } 6240be0d8bdSHansol Suh 625459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAddKernel_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscBool herm) 626d71ae5a4SJacob Faibussowitsch { 627096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 628637a0070SStefano Zampini const PetscScalar *ax; 629637a0070SStefano Zampini PetscScalar *ay; 630d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 631096963f5SLois Curfman McInnes 6323a40ed3dSBarry Smith PetscFunctionBegin; 6336f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 6349566063dSJacob Faibussowitsch PetscCall(VecCopy(yy, zz)); 635459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 636459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 6379566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 6389566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 6399566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 6409566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 6419566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 6429566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 6433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 644096963f5SLois Curfman McInnes } 645096963f5SLois Curfman McInnes 646459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTranspose_MPIDense(Mat A, Vec xx, Vec yy) 647459e8d23SBlanca Mellado Pinto { 648459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 649459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_FALSE)); 650459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 651459e8d23SBlanca Mellado Pinto } 652459e8d23SBlanca Mellado Pinto 653459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 654459e8d23SBlanca Mellado Pinto { 655459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 656459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_FALSE)); 657459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 658459e8d23SBlanca Mellado Pinto } 659459e8d23SBlanca Mellado Pinto 660459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTranspose_MPIDense(Mat A, Vec xx, Vec yy) 661459e8d23SBlanca Mellado Pinto { 662459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 663459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_TRUE)); 664459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 665459e8d23SBlanca Mellado Pinto } 666459e8d23SBlanca Mellado Pinto 667459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 668459e8d23SBlanca Mellado Pinto { 669459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 670459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_TRUE)); 671459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 672459e8d23SBlanca Mellado Pinto } 673459e8d23SBlanca Mellado Pinto 674d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetDiagonal_MPIDense(Mat A, Vec v) 675d71ae5a4SJacob Faibussowitsch { 67639ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 67779560b15SJacob Faibussowitsch PetscInt lda, len, i, nl, ng, m = A->rmap->n, radd; 67879560b15SJacob Faibussowitsch PetscScalar *x; 679637a0070SStefano Zampini const PetscScalar *av; 680ed3cc1f0SBarry Smith 6813a40ed3dSBarry Smith PetscFunctionBegin; 6829566063dSJacob Faibussowitsch PetscCall(VecGetArray(v, &x)); 68379560b15SJacob Faibussowitsch PetscCall(VecGetSize(v, &ng)); 68479560b15SJacob Faibussowitsch PetscCheck(ng == A->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming mat and vec"); 68579560b15SJacob Faibussowitsch PetscCall(VecGetLocalSize(v, &nl)); 686d0f46423SBarry Smith len = PetscMin(a->A->rmap->n, a->A->cmap->n); 687d0f46423SBarry Smith radd = A->rmap->rstart * m; 6889566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 6899566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 690ad540459SPierre Jolivet for (i = 0; i < len; i++) x[i] = av[radd + i * lda + i]; 6919566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 6920be0d8bdSHansol Suh if (nl - i > 0) PetscCall(PetscArrayzero(x + i, nl - i)); 6939566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(v, &x)); 6943ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6958965ea79SLois Curfman McInnes } 6968965ea79SLois Curfman McInnes 69766976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MPIDense(Mat mat) 698d71ae5a4SJacob Faibussowitsch { 6993501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 700ed3cc1f0SBarry Smith 7013a40ed3dSBarry Smith PetscFunctionBegin; 7023ba16761SJacob Faibussowitsch PetscCall(PetscLogObjectState((PetscObject)mat, "Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT, mat->rmap->N, mat->cmap->N)); 7039566063dSJacob Faibussowitsch PetscCall(MatStashDestroy_Private(&mat->stash)); 70428b400f6SJacob Faibussowitsch PetscCheck(!mdn->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 70528b400f6SJacob Faibussowitsch PetscCheck(!mdn->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 7069566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->A)); 7079566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->lvec)); 7089566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&mdn->Mvctx)); 7099566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->cvec)); 7109566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->cmat)); 71101b82886SBarry Smith 7129566063dSJacob Faibussowitsch PetscCall(PetscFree(mat->data)); 7139566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, NULL)); 7148baccfbdSHong Zhang 7159566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", NULL)); 7169566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", NULL)); 7179566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", NULL)); 7189566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", NULL)); 7199566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", NULL)); 7209566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", NULL)); 7219566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", NULL)); 7229566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", NULL)); 7239566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", NULL)); 7249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", NULL)); 7259566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", NULL)); 7269566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", NULL)); 7279566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", NULL)); 7288baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 7299566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", NULL)); 7308baccfbdSHong Zhang #endif 731d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 7329566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", NULL)); 733d24d4204SJose E. Roman #endif 7349566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", NULL)); 7359566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", NULL)); 7369566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", NULL)); 7376718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 7389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", NULL)); 7399566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", NULL)); 7402e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", NULL)); 7412e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensecuda_mpidense_C", NULL)); 7422e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL)); 7432e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL)); 7442e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL)); 7452e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL)); 7462e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArray_C", NULL)); 7472e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayRead_C", NULL)); 7482e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayWrite_C", NULL)); 7492e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArray_C", NULL)); 7502e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayRead_C", NULL)); 7512e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayWrite_C", NULL)); 7522e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAPlaceArray_C", NULL)); 7532e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAResetArray_C", NULL)); 7542e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAReplaceArray_C", NULL)); 7553d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDASetPreallocation_C", NULL)); 7566718818eSStefano Zampini #endif 75747d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 75847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", NULL)); 75947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", NULL)); 76047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", NULL)); 76147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensehip_mpidense_C", NULL)); 76247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensehip_C", NULL)); 76347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidensehip_C", NULL)); 76447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaij_C", NULL)); 76547d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaijhipsparse_C", NULL)); 76647d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArray_C", NULL)); 76747d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayRead_C", NULL)); 76847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayWrite_C", NULL)); 76947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArray_C", NULL)); 77047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayRead_C", NULL)); 77147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayWrite_C", NULL)); 77247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPPlaceArray_C", NULL)); 77347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPResetArray_C", NULL)); 77447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPReplaceArray_C", NULL)); 7753d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPSetPreallocation_C", NULL)); 77647d993e7Ssuyashtn #endif 7779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", NULL)); 7789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", NULL)); 7799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", NULL)); 7809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", NULL)); 7819566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", NULL)); 7829566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", NULL)); 7839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", NULL)); 7849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", NULL)); 7859566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", NULL)); 7869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", NULL)); 787d016bddeSToby Isaac PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultColumnRange_C", NULL)); 7880be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultAddColumnRange_C", NULL)); 7890be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeColumnRange_C", NULL)); 7900be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeAddColumnRange_C", NULL)); 791f8103e6bSStefano Zampini 792f8103e6bSStefano Zampini PetscCall(PetscObjectCompose((PetscObject)mat, "DiagonalBlock", NULL)); 7933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7948965ea79SLois Curfman McInnes } 79539ddd567SLois Curfman McInnes 7969804daf3SBarry Smith #include <petscdraw.h> 797d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat, PetscViewer viewer) 798d71ae5a4SJacob Faibussowitsch { 79939ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 800616b8fbbSStefano Zampini PetscMPIInt rank; 80119fd82e9SBarry Smith PetscViewerType vtype; 802ace3abfcSBarry Smith PetscBool iascii, isdraw; 803b0a32e0cSBarry Smith PetscViewer sviewer; 804f3ef73ceSBarry Smith PetscViewerFormat format; 8058965ea79SLois Curfman McInnes 8063a40ed3dSBarry Smith PetscFunctionBegin; 8079566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat), &rank)); 8089566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 8099566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 81032077d6dSBarry Smith if (iascii) { 8119566063dSJacob Faibussowitsch PetscCall(PetscViewerGetType(viewer, &vtype)); 8129566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 813456192e2SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 8144e220ebcSLois Curfman McInnes MatInfo info; 8159566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mat, MAT_LOCAL, &info)); 8169566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 8179371c9d4SSatish Balay PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, " [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n", rank, mat->rmap->n, (PetscInt)info.nz_used, (PetscInt)info.nz_allocated, 8189371c9d4SSatish Balay (PetscInt)info.memory)); 8199566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 8209566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 8216f08ad05SPierre Jolivet if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx, viewer)); 8223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 823fb9695e5SSatish Balay } else if (format == PETSC_VIEWER_ASCII_INFO) { 8243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8258965ea79SLois Curfman McInnes } 826f1af5d2fSBarry Smith } else if (isdraw) { 827b0a32e0cSBarry Smith PetscDraw draw; 828ace3abfcSBarry Smith PetscBool isnull; 829f1af5d2fSBarry Smith 8309566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw)); 8319566063dSJacob Faibussowitsch PetscCall(PetscDrawIsNull(draw, &isnull)); 8323ba16761SJacob Faibussowitsch if (isnull) PetscFunctionReturn(PETSC_SUCCESS); 833f1af5d2fSBarry Smith } 83477ed5343SBarry Smith 8357da1fb6eSBarry Smith { 8368965ea79SLois Curfman McInnes /* assemble the entire matrix onto first processor. */ 8378965ea79SLois Curfman McInnes Mat A; 838d0f46423SBarry Smith PetscInt M = mat->rmap->N, N = mat->cmap->N, m, row, i, nz; 839ba8c8a56SBarry Smith PetscInt *cols; 840ba8c8a56SBarry Smith PetscScalar *vals; 8418965ea79SLois Curfman McInnes 8429566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &A)); 843dd400576SPatrick Sanan if (rank == 0) { 8449566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, M, N, M, N)); 8453a40ed3dSBarry Smith } else { 8469566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, 0, 0, M, N)); 8478965ea79SLois Curfman McInnes } 8487adad957SLisandro Dalcin /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */ 8499566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATMPIDENSE)); 8509566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 8518965ea79SLois Curfman McInnes 85239ddd567SLois Curfman McInnes /* Copy the matrix ... This isn't the most efficient means, 85339ddd567SLois Curfman McInnes but it's quick for now */ 85451022da4SBarry Smith A->insertmode = INSERT_VALUES; 8552205254eSKarl Rupp 8562205254eSKarl Rupp row = mat->rmap->rstart; 8572205254eSKarl Rupp m = mdn->A->rmap->n; 8588965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 8599566063dSJacob Faibussowitsch PetscCall(MatGetRow_MPIDense(mat, row, &nz, &cols, &vals)); 8609566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(A, 1, &row, nz, cols, vals, INSERT_VALUES)); 8619566063dSJacob Faibussowitsch PetscCall(MatRestoreRow_MPIDense(mat, row, &nz, &cols, &vals)); 86239ddd567SLois Curfman McInnes row++; 8638965ea79SLois Curfman McInnes } 8648965ea79SLois Curfman McInnes 8659566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 8669566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 8679566063dSJacob Faibussowitsch PetscCall(PetscViewerGetSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 868dd400576SPatrick Sanan if (rank == 0) { 869f4f49eeaSPierre Jolivet PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense *)A->data)->A, ((PetscObject)mat)->name)); 870f4f49eeaSPierre Jolivet PetscCall(MatView_SeqDense(((Mat_MPIDense *)A->data)->A, sviewer)); 8718965ea79SLois Curfman McInnes } 8729566063dSJacob Faibussowitsch PetscCall(PetscViewerRestoreSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 8739566063dSJacob Faibussowitsch PetscCall(MatDestroy(&A)); 8748965ea79SLois Curfman McInnes } 8753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8768965ea79SLois Curfman McInnes } 8778965ea79SLois Curfman McInnes 87866976f2fSJacob Faibussowitsch static PetscErrorCode MatView_MPIDense(Mat mat, PetscViewer viewer) 879d71ae5a4SJacob Faibussowitsch { 880ace3abfcSBarry Smith PetscBool iascii, isbinary, isdraw, issocket; 8818965ea79SLois Curfman McInnes 882433994e6SBarry Smith PetscFunctionBegin; 8839566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 8849566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 8859566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSOCKET, &issocket)); 8869566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 8870f5bd95cSBarry Smith 88832077d6dSBarry Smith if (iascii || issocket || isdraw) { 8899566063dSJacob Faibussowitsch PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat, viewer)); 8901baa6e33SBarry Smith } else if (isbinary) PetscCall(MatView_Dense_Binary(mat, viewer)); 8913ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8928965ea79SLois Curfman McInnes } 8938965ea79SLois Curfman McInnes 89466976f2fSJacob Faibussowitsch static PetscErrorCode MatGetInfo_MPIDense(Mat A, MatInfoType flag, MatInfo *info) 895d71ae5a4SJacob Faibussowitsch { 8963501a2bdSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 8973501a2bdSLois Curfman McInnes Mat mdn = mat->A; 8983966268fSBarry Smith PetscLogDouble isend[5], irecv[5]; 8998965ea79SLois Curfman McInnes 9003a40ed3dSBarry Smith PetscFunctionBegin; 9014e220ebcSLois Curfman McInnes info->block_size = 1.0; 9022205254eSKarl Rupp 9039566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mdn, MAT_LOCAL, info)); 9042205254eSKarl Rupp 9059371c9d4SSatish Balay isend[0] = info->nz_used; 9069371c9d4SSatish Balay isend[1] = info->nz_allocated; 9079371c9d4SSatish Balay isend[2] = info->nz_unneeded; 9089371c9d4SSatish Balay isend[3] = info->memory; 9099371c9d4SSatish Balay isend[4] = info->mallocs; 9108965ea79SLois Curfman McInnes if (flag == MAT_LOCAL) { 9114e220ebcSLois Curfman McInnes info->nz_used = isend[0]; 9124e220ebcSLois Curfman McInnes info->nz_allocated = isend[1]; 9134e220ebcSLois Curfman McInnes info->nz_unneeded = isend[2]; 9144e220ebcSLois Curfman McInnes info->memory = isend[3]; 9154e220ebcSLois Curfman McInnes info->mallocs = isend[4]; 9168965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_MAX) { 917462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_MAX, PetscObjectComm((PetscObject)A))); 9182205254eSKarl Rupp 9194e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 9204e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 9214e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 9224e220ebcSLois Curfman McInnes info->memory = irecv[3]; 9234e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 9248965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_SUM) { 925462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_SUM, PetscObjectComm((PetscObject)A))); 9262205254eSKarl Rupp 9274e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 9284e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 9294e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 9304e220ebcSLois Curfman McInnes info->memory = irecv[3]; 9314e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 9328965ea79SLois Curfman McInnes } 9334e220ebcSLois Curfman McInnes info->fill_ratio_given = 0; /* no parallel LU/ILU/Cholesky */ 9344e220ebcSLois Curfman McInnes info->fill_ratio_needed = 0; 9354e220ebcSLois Curfman McInnes info->factor_mallocs = 0; 9363ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9378965ea79SLois Curfman McInnes } 9388965ea79SLois Curfman McInnes 93966976f2fSJacob Faibussowitsch static PetscErrorCode MatSetOption_MPIDense(Mat A, MatOption op, PetscBool flg) 940d71ae5a4SJacob Faibussowitsch { 94139ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 9428965ea79SLois Curfman McInnes 9433a40ed3dSBarry Smith PetscFunctionBegin; 94412c028f9SKris Buschelman switch (op) { 945512a5fc5SBarry Smith case MAT_NEW_NONZERO_LOCATIONS: 94612c028f9SKris Buschelman case MAT_NEW_NONZERO_LOCATION_ERR: 94712c028f9SKris Buschelman case MAT_NEW_NONZERO_ALLOCATION_ERR: 94843674050SBarry Smith MatCheckPreallocated(A, 1); 9499566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 95012c028f9SKris Buschelman break; 95112c028f9SKris Buschelman case MAT_ROW_ORIENTED: 95243674050SBarry Smith MatCheckPreallocated(A, 1); 9534e0d8c25SBarry Smith a->roworiented = flg; 9549566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 95512c028f9SKris Buschelman break; 956d71ae5a4SJacob Faibussowitsch case MAT_IGNORE_OFF_PROC_ENTRIES: 957d71ae5a4SJacob Faibussowitsch a->donotstash = flg; 958d71ae5a4SJacob Faibussowitsch break; 95977e54ba9SKris Buschelman case MAT_SYMMETRIC: 96077e54ba9SKris Buschelman case MAT_STRUCTURALLY_SYMMETRIC: 9619a4540c5SBarry Smith case MAT_HERMITIAN: 9629a4540c5SBarry Smith case MAT_SYMMETRY_ETERNAL: 963b94d7dedSBarry Smith case MAT_STRUCTURAL_SYMMETRY_ETERNAL: 964b94d7dedSBarry Smith case MAT_SPD: 965b94d7dedSBarry Smith case MAT_SPD_ETERNAL: 966b94d7dedSBarry Smith /* if the diagonal matrix is square it inherits some of the properties above */ 9679725ddffSPierre Jolivet if (a->A && A->rmap->n == A->cmap->n) PetscCall(MatSetOption(a->A, op, flg)); 96877e54ba9SKris Buschelman break; 969d71ae5a4SJacob Faibussowitsch default: 970888c827cSStefano Zampini break; 9713a40ed3dSBarry Smith } 9723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9738965ea79SLois Curfman McInnes } 9748965ea79SLois Curfman McInnes 97566976f2fSJacob Faibussowitsch static PetscErrorCode MatDiagonalScale_MPIDense(Mat A, Vec ll, Vec rr) 976d71ae5a4SJacob Faibussowitsch { 9775b2fa520SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 978637a0070SStefano Zampini const PetscScalar *l; 979637a0070SStefano Zampini PetscScalar x, *v, *vv, *r; 980637a0070SStefano Zampini PetscInt i, j, s2a, s3a, s2, s3, m = mdn->A->rmap->n, n = mdn->A->cmap->n, lda; 9815b2fa520SLois Curfman McInnes 9825b2fa520SLois Curfman McInnes PetscFunctionBegin; 9839566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(mdn->A, &vv)); 9849566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mdn->A, &lda)); 9859566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &s2, &s3)); 9865b2fa520SLois Curfman McInnes if (ll) { 9879566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(ll, &s2a)); 98808401ef6SPierre Jolivet PetscCheck(s2a == s2, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2); 9899566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(ll, &l)); 9905b2fa520SLois Curfman McInnes for (i = 0; i < m; i++) { 9915b2fa520SLois Curfman McInnes x = l[i]; 992637a0070SStefano Zampini v = vv + i; 9939371c9d4SSatish Balay for (j = 0; j < n; j++) { 9949371c9d4SSatish Balay (*v) *= x; 9959371c9d4SSatish Balay v += lda; 9969371c9d4SSatish Balay } 9975b2fa520SLois Curfman McInnes } 9989566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(ll, &l)); 9999566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 10005b2fa520SLois Curfman McInnes } 10015b2fa520SLois Curfman McInnes if (rr) { 1002637a0070SStefano Zampini const PetscScalar *ar; 1003637a0070SStefano Zampini 10049566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(rr, &s3a)); 100508401ef6SPierre Jolivet PetscCheck(s3a == s3, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3); 10069566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(rr, &ar)); 10076f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 10089566063dSJacob Faibussowitsch PetscCall(VecGetArray(mdn->lvec, &r)); 10099566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 10109566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 10119566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(rr, &ar)); 10125b2fa520SLois Curfman McInnes for (i = 0; i < n; i++) { 10135b2fa520SLois Curfman McInnes x = r[i]; 1014637a0070SStefano Zampini v = vv + i * lda; 10152205254eSKarl Rupp for (j = 0; j < m; j++) (*v++) *= x; 10165b2fa520SLois Curfman McInnes } 10179566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(mdn->lvec, &r)); 10189566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 10195b2fa520SLois Curfman McInnes } 10209566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(mdn->A, &vv)); 10213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10225b2fa520SLois Curfman McInnes } 10235b2fa520SLois Curfman McInnes 102466976f2fSJacob Faibussowitsch static PetscErrorCode MatNorm_MPIDense(Mat A, NormType type, PetscReal *nrm) 1025d71ae5a4SJacob Faibussowitsch { 10263501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 102713f74950SBarry Smith PetscInt i, j; 1028e91c04dfSPierre Jolivet PetscMPIInt size; 1029329f5518SBarry Smith PetscReal sum = 0.0; 1030637a0070SStefano Zampini const PetscScalar *av, *v; 10313501a2bdSLois Curfman McInnes 10323a40ed3dSBarry Smith PetscFunctionBegin; 10339566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, &av)); 1034637a0070SStefano Zampini v = av; 10359566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1036616b8fbbSStefano Zampini if (size == 1) { 10379566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, nrm)); 10383501a2bdSLois Curfman McInnes } else { 10393501a2bdSLois Curfman McInnes if (type == NORM_FROBENIUS) { 1040d0f46423SBarry Smith for (i = 0; i < mdn->A->cmap->n * mdn->A->rmap->n; i++) { 10419371c9d4SSatish Balay sum += PetscRealPart(PetscConj(*v) * (*v)); 10429371c9d4SSatish Balay v++; 10433501a2bdSLois Curfman McInnes } 1044462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(&sum, nrm, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 10458f1a2a5eSBarry Smith *nrm = PetscSqrtReal(*nrm); 10469566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * mdn->A->cmap->n * mdn->A->rmap->n)); 10473a40ed3dSBarry Smith } else if (type == NORM_1) { 1048e91c04dfSPierre Jolivet PetscReal *tmp; 1049e91c04dfSPierre Jolivet 1050e91c04dfSPierre Jolivet PetscCall(PetscCalloc1(A->cmap->N, &tmp)); 1051064f8208SBarry Smith *nrm = 0.0; 1052637a0070SStefano Zampini v = av; 1053d0f46423SBarry Smith for (j = 0; j < mdn->A->cmap->n; j++) { 1054d0f46423SBarry Smith for (i = 0; i < mdn->A->rmap->n; i++) { 10559371c9d4SSatish Balay tmp[j] += PetscAbsScalar(*v); 10569371c9d4SSatish Balay v++; 10573501a2bdSLois Curfman McInnes } 10583501a2bdSLois Curfman McInnes } 1059e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, tmp, A->cmap->N, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 1060d0f46423SBarry Smith for (j = 0; j < A->cmap->N; j++) { 1061e91c04dfSPierre Jolivet if (tmp[j] > *nrm) *nrm = tmp[j]; 10623501a2bdSLois Curfman McInnes } 1063e91c04dfSPierre Jolivet PetscCall(PetscFree(tmp)); 10649566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(A->cmap->n * A->rmap->n)); 10653a40ed3dSBarry Smith } else if (type == NORM_INFINITY) { /* max row norm */ 1066e91c04dfSPierre Jolivet PetscCall(MatNorm(mdn->A, type, nrm)); 1067e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, nrm, 1, MPIU_REAL, MPIU_MAX, PetscObjectComm((PetscObject)A))); 1068ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for two norm"); 10693501a2bdSLois Curfman McInnes } 10709566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, &av)); 10713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10723501a2bdSLois Curfman McInnes } 10733501a2bdSLois Curfman McInnes 107466976f2fSJacob Faibussowitsch static PetscErrorCode MatTranspose_MPIDense(Mat A, MatReuse reuse, Mat *matout) 1075d71ae5a4SJacob Faibussowitsch { 10763501a2bdSLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10773501a2bdSLois Curfman McInnes Mat B; 1078d0f46423SBarry Smith PetscInt M = A->rmap->N, N = A->cmap->N, m, n, *rwork, rstart = A->rmap->rstart; 1079637a0070SStefano Zampini PetscInt j, i, lda; 108087828ca2SBarry Smith PetscScalar *v; 10813501a2bdSLois Curfman McInnes 10823a40ed3dSBarry Smith PetscFunctionBegin; 10837fb60732SBarry Smith if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *matout)); 1084cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { 10859566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 10869566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->cmap->n, A->rmap->n, N, M)); 10879566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)A)->type_name)); 10889566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(B, NULL)); 1089637a0070SStefano Zampini } else B = *matout; 10903501a2bdSLois Curfman McInnes 10919371c9d4SSatish Balay m = a->A->rmap->n; 10929371c9d4SSatish Balay n = a->A->cmap->n; 10939566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)&v)); 10949566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 10959566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &rwork)); 10963501a2bdSLois Curfman McInnes for (i = 0; i < m; i++) rwork[i] = rstart + i; 10971acff37aSSatish Balay for (j = 0; j < n; j++) { 10989566063dSJacob Faibussowitsch PetscCall(MatSetValues(B, 1, &j, m, rwork, v, INSERT_VALUES)); 10998e3a54c0SPierre Jolivet v = PetscSafePointerPlusOffset(v, lda); 11003501a2bdSLois Curfman McInnes } 11019566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)&v)); 11029566063dSJacob Faibussowitsch PetscCall(PetscFree(rwork)); 11039566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 11049566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 1105cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) { 11063501a2bdSLois Curfman McInnes *matout = B; 11073501a2bdSLois Curfman McInnes } else { 11089566063dSJacob Faibussowitsch PetscCall(MatHeaderMerge(A, &B)); 11093501a2bdSLois Curfman McInnes } 11103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1111096963f5SLois Curfman McInnes } 1112096963f5SLois Curfman McInnes 11136849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat, MatDuplicateOption, Mat *); 111452c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat, PetscScalar); 11158965ea79SLois Curfman McInnes 111666976f2fSJacob Faibussowitsch static PetscErrorCode MatSetUp_MPIDense(Mat A) 1117d71ae5a4SJacob Faibussowitsch { 1118273d9f13SBarry Smith PetscFunctionBegin; 11199566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 11209566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 112148a46eb9SPierre Jolivet if (!A->preallocated) PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 11223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1123273d9f13SBarry Smith } 1124273d9f13SBarry Smith 112566976f2fSJacob Faibussowitsch static PetscErrorCode MatAXPY_MPIDense(Mat Y, PetscScalar alpha, Mat X, MatStructure str) 1126d71ae5a4SJacob Faibussowitsch { 1127488007eeSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)Y->data, *B = (Mat_MPIDense *)X->data; 1128488007eeSBarry Smith 1129488007eeSBarry Smith PetscFunctionBegin; 11309566063dSJacob Faibussowitsch PetscCall(MatAXPY(A->A, alpha, B->A, str)); 11313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1132488007eeSBarry Smith } 1133488007eeSBarry Smith 113466976f2fSJacob Faibussowitsch static PetscErrorCode MatConjugate_MPIDense(Mat mat) 1135d71ae5a4SJacob Faibussowitsch { 1136ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 1137ba337c44SJed Brown 1138ba337c44SJed Brown PetscFunctionBegin; 11399566063dSJacob Faibussowitsch PetscCall(MatConjugate(a->A)); 11403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1141ba337c44SJed Brown } 1142ba337c44SJed Brown 114366976f2fSJacob Faibussowitsch static PetscErrorCode MatRealPart_MPIDense(Mat A) 1144d71ae5a4SJacob Faibussowitsch { 1145ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1146ba337c44SJed Brown 1147ba337c44SJed Brown PetscFunctionBegin; 11489566063dSJacob Faibussowitsch PetscCall(MatRealPart(a->A)); 11493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1150ba337c44SJed Brown } 1151ba337c44SJed Brown 115266976f2fSJacob Faibussowitsch static PetscErrorCode MatImaginaryPart_MPIDense(Mat A) 1153d71ae5a4SJacob Faibussowitsch { 1154ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1155ba337c44SJed Brown 1156ba337c44SJed Brown PetscFunctionBegin; 11579566063dSJacob Faibussowitsch PetscCall(MatImaginaryPart(a->A)); 11583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1159ba337c44SJed Brown } 1160ba337c44SJed Brown 1161d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetColumnVector_MPIDense(Mat A, Vec v, PetscInt col) 1162d71ae5a4SJacob Faibussowitsch { 1163637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 116449a6ff4bSBarry Smith 116549a6ff4bSBarry Smith PetscFunctionBegin; 116628b400f6SJacob Faibussowitsch PetscCheck(a->A, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing local matrix"); 116728b400f6SJacob Faibussowitsch PetscCheck(a->A->ops->getcolumnvector, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing get column operation"); 11689566063dSJacob Faibussowitsch PetscCall((*a->A->ops->getcolumnvector)(a->A, v, col)); 11693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 117049a6ff4bSBarry Smith } 117149a6ff4bSBarry Smith 1172857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat, PetscInt, PetscReal *); 117352c5f739Sprj- 117466976f2fSJacob Faibussowitsch static PetscErrorCode MatGetColumnReductions_MPIDense(Mat A, PetscInt type, PetscReal *reductions) 1175d71ae5a4SJacob Faibussowitsch { 1176a873a8cdSSam Reynolds PetscInt i, m, n; 11770716a85fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 11780716a85fSBarry Smith 11790716a85fSBarry Smith PetscFunctionBegin; 11809566063dSJacob Faibussowitsch PetscCall(MatGetSize(A, &m, &n)); 1181857cbf51SRichard Tran Mills if (type == REDUCTION_MEAN_REALPART) { 1182e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_REALPART, reductions)); 1183857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_IMAGINARYPART) { 1184e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_IMAGINARYPART, reductions)); 1185a873a8cdSSam Reynolds } else { 1186e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, type, reductions)); 1187a873a8cdSSam Reynolds } 1188857cbf51SRichard Tran Mills if (type == NORM_2) { 1189e91c04dfSPierre Jolivet for (i = 0; i < n; i++) reductions[i] *= reductions[i]; 11900716a85fSBarry Smith } 1191857cbf51SRichard Tran Mills if (type == NORM_INFINITY) { 1192e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, reductions, n, MPIU_REAL, MPIU_MAX, A->hdr.comm)); 11930716a85fSBarry Smith } else { 1194e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, reductions, n, MPIU_REAL, MPIU_SUM, A->hdr.comm)); 11950716a85fSBarry Smith } 1196857cbf51SRichard Tran Mills if (type == NORM_2) { 1197a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] = PetscSqrtReal(reductions[i]); 1198857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) { 1199a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] /= m; 12000716a85fSBarry Smith } 12013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12020716a85fSBarry Smith } 12030716a85fSBarry Smith 1204d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetRandom_MPIDense(Mat x, PetscRandom rctx) 1205d71ae5a4SJacob Faibussowitsch { 120673a71a0fSBarry Smith Mat_MPIDense *d = (Mat_MPIDense *)x->data; 120773a71a0fSBarry Smith 120873a71a0fSBarry Smith PetscFunctionBegin; 12099566063dSJacob Faibussowitsch PetscCall(MatSetRandom(d->A, rctx)); 12103faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 12113faff063SStefano Zampini x->offloadmask = d->A->offloadmask; 12123faff063SStefano Zampini #endif 12133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 121473a71a0fSBarry Smith } 121573a71a0fSBarry Smith 1216d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A, PetscBool *missing, PetscInt *d) 1217d71ae5a4SJacob Faibussowitsch { 12183b49f96aSBarry Smith PetscFunctionBegin; 12193b49f96aSBarry Smith *missing = PETSC_FALSE; 12203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12213b49f96aSBarry Smith } 12223b49f96aSBarry Smith 12234222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1224cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12256718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1226a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12276718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat, Mat, PetscBool *); 12286718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat, PetscViewer); 12295d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat); 1230cc48ffa7SToby Isaac 123109dc0095SBarry Smith static struct _MatOps MatOps_Values = {MatSetValues_MPIDense, 123209dc0095SBarry Smith MatGetRow_MPIDense, 123309dc0095SBarry Smith MatRestoreRow_MPIDense, 123409dc0095SBarry Smith MatMult_MPIDense, 123597304618SKris Buschelman /* 4*/ MatMultAdd_MPIDense, 12367c922b88SBarry Smith MatMultTranspose_MPIDense, 12377c922b88SBarry Smith MatMultTransposeAdd_MPIDense, 1238f4259b30SLisandro Dalcin NULL, 1239f4259b30SLisandro Dalcin NULL, 1240f4259b30SLisandro Dalcin NULL, 1241f4259b30SLisandro Dalcin /* 10*/ NULL, 1242f4259b30SLisandro Dalcin NULL, 1243f4259b30SLisandro Dalcin NULL, 1244f4259b30SLisandro Dalcin NULL, 124509dc0095SBarry Smith MatTranspose_MPIDense, 124697304618SKris Buschelman /* 15*/ MatGetInfo_MPIDense, 12476e4ee0c6SHong Zhang MatEqual_MPIDense, 124809dc0095SBarry Smith MatGetDiagonal_MPIDense, 12495b2fa520SLois Curfman McInnes MatDiagonalScale_MPIDense, 125009dc0095SBarry Smith MatNorm_MPIDense, 125197304618SKris Buschelman /* 20*/ MatAssemblyBegin_MPIDense, 125209dc0095SBarry Smith MatAssemblyEnd_MPIDense, 125309dc0095SBarry Smith MatSetOption_MPIDense, 125409dc0095SBarry Smith MatZeroEntries_MPIDense, 1255d519adbfSMatthew Knepley /* 24*/ MatZeroRows_MPIDense, 1256f4259b30SLisandro Dalcin NULL, 1257f4259b30SLisandro Dalcin NULL, 1258f4259b30SLisandro Dalcin NULL, 1259f4259b30SLisandro Dalcin NULL, 12604994cf47SJed Brown /* 29*/ MatSetUp_MPIDense, 1261f4259b30SLisandro Dalcin NULL, 1262f4259b30SLisandro Dalcin NULL, 1263c56a70eeSBarry Smith MatGetDiagonalBlock_MPIDense, 1264f4259b30SLisandro Dalcin NULL, 1265d519adbfSMatthew Knepley /* 34*/ MatDuplicate_MPIDense, 1266f4259b30SLisandro Dalcin NULL, 1267f4259b30SLisandro Dalcin NULL, 1268f4259b30SLisandro Dalcin NULL, 1269f4259b30SLisandro Dalcin NULL, 1270d519adbfSMatthew Knepley /* 39*/ MatAXPY_MPIDense, 12717dae84e0SHong Zhang MatCreateSubMatrices_MPIDense, 1272f4259b30SLisandro Dalcin NULL, 127309dc0095SBarry Smith MatGetValues_MPIDense, 1274a76f77c3SStefano Zampini MatCopy_MPIDense, 1275f4259b30SLisandro Dalcin /* 44*/ NULL, 127609dc0095SBarry Smith MatScale_MPIDense, 12772f605a99SJose E. Roman MatShift_MPIDense, 1278f4259b30SLisandro Dalcin NULL, 1279f4259b30SLisandro Dalcin NULL, 128073a71a0fSBarry Smith /* 49*/ MatSetRandom_MPIDense, 1281f4259b30SLisandro Dalcin NULL, 1282f4259b30SLisandro Dalcin NULL, 1283f4259b30SLisandro Dalcin NULL, 1284f4259b30SLisandro Dalcin NULL, 1285f4259b30SLisandro Dalcin /* 54*/ NULL, 1286f4259b30SLisandro Dalcin NULL, 1287f4259b30SLisandro Dalcin NULL, 1288f4259b30SLisandro Dalcin NULL, 1289f4259b30SLisandro Dalcin NULL, 12907dae84e0SHong Zhang /* 59*/ MatCreateSubMatrix_MPIDense, 1291b9b97703SBarry Smith MatDestroy_MPIDense, 1292b9b97703SBarry Smith MatView_MPIDense, 1293f4259b30SLisandro Dalcin NULL, 1294f4259b30SLisandro Dalcin NULL, 1295f4259b30SLisandro Dalcin /* 64*/ NULL, 1296f4259b30SLisandro Dalcin NULL, 1297f4259b30SLisandro Dalcin NULL, 1298f4259b30SLisandro Dalcin NULL, 1299f4259b30SLisandro Dalcin NULL, 1300f4259b30SLisandro Dalcin /* 69*/ NULL, 1301f4259b30SLisandro Dalcin NULL, 1302f4259b30SLisandro Dalcin NULL, 1303f4259b30SLisandro Dalcin NULL, 1304f4259b30SLisandro Dalcin NULL, 1305f4259b30SLisandro Dalcin /* 74*/ NULL, 1306f4259b30SLisandro Dalcin NULL, 1307f4259b30SLisandro Dalcin NULL, 1308f4259b30SLisandro Dalcin NULL, 1309*8bb0f5c6SPierre Jolivet MatLoad_MPIDense, 1310f4259b30SLisandro Dalcin /* 79*/ NULL, 1311f4259b30SLisandro Dalcin NULL, 1312f4259b30SLisandro Dalcin NULL, 1313f4259b30SLisandro Dalcin NULL, 1314*8bb0f5c6SPierre Jolivet /* 83*/ NULL, 1315f4259b30SLisandro Dalcin NULL, 1316f4259b30SLisandro Dalcin NULL, 1317f4259b30SLisandro Dalcin NULL, 13186718818eSStefano Zampini MatMatTransposeMultSymbolic_MPIDense_MPIDense, 1319cc48ffa7SToby Isaac MatMatTransposeMultNumeric_MPIDense_MPIDense, 1320*8bb0f5c6SPierre Jolivet /* 89*/ NULL, 1321*8bb0f5c6SPierre Jolivet MatProductSetFromOptions_MPIDense, 1322f4259b30SLisandro Dalcin NULL, 1323f4259b30SLisandro Dalcin NULL, 1324ba337c44SJed Brown MatConjugate_MPIDense, 1325*8bb0f5c6SPierre Jolivet /* 94*/ NULL, 1326f4259b30SLisandro Dalcin NULL, 1327ba337c44SJed Brown MatRealPart_MPIDense, 1328ba337c44SJed Brown MatImaginaryPart_MPIDense, 1329f4259b30SLisandro Dalcin NULL, 1330*8bb0f5c6SPierre Jolivet /*99*/ NULL, 1331*8bb0f5c6SPierre Jolivet NULL, 1332*8bb0f5c6SPierre Jolivet NULL, 1333*8bb0f5c6SPierre Jolivet NULL, 1334*8bb0f5c6SPierre Jolivet MatGetColumnVector_MPIDense, 1335*8bb0f5c6SPierre Jolivet /*104*/ MatMissingDiagonal_MPIDense, 1336*8bb0f5c6SPierre Jolivet NULL, 1337*8bb0f5c6SPierre Jolivet NULL, 1338*8bb0f5c6SPierre Jolivet NULL, 1339f4259b30SLisandro Dalcin NULL, 1340f4259b30SLisandro Dalcin /*109*/ NULL, 1341f4259b30SLisandro Dalcin NULL, 1342f4259b30SLisandro Dalcin NULL, 1343459e8d23SBlanca Mellado Pinto MatMultHermitianTranspose_MPIDense, 1344459e8d23SBlanca Mellado Pinto MatMultHermitianTransposeAdd_MPIDense, 1345*8bb0f5c6SPierre Jolivet /*114*/ NULL, 1346*8bb0f5c6SPierre Jolivet NULL, 1347*8bb0f5c6SPierre Jolivet MatGetColumnReductions_MPIDense, 1348*8bb0f5c6SPierre Jolivet NULL, 1349*8bb0f5c6SPierre Jolivet NULL, 1350*8bb0f5c6SPierre Jolivet NULL, 1351*8bb0f5c6SPierre Jolivet /*120*/ NULL, 1352*8bb0f5c6SPierre Jolivet MatTransposeMatMultSymbolic_MPIDense_MPIDense, 1353*8bb0f5c6SPierre Jolivet MatTransposeMatMultNumeric_MPIDense_MPIDense, 1354f4259b30SLisandro Dalcin NULL, 1355f4259b30SLisandro Dalcin /*124*/ NULL, 1356*8bb0f5c6SPierre Jolivet NULL, 1357f4259b30SLisandro Dalcin NULL, 1358f4259b30SLisandro Dalcin NULL, 1359f4259b30SLisandro Dalcin NULL, 1360f4259b30SLisandro Dalcin /*129*/ NULL, 1361f4259b30SLisandro Dalcin NULL, 1362*8bb0f5c6SPierre Jolivet MatCreateMPIMatConcatenateSeqMat_MPIDense, 1363*8bb0f5c6SPierre Jolivet NULL, 1364f4259b30SLisandro Dalcin NULL, 1365f4259b30SLisandro Dalcin /*134*/ NULL, 1366f4259b30SLisandro Dalcin NULL, 1367f4259b30SLisandro Dalcin NULL, 1368f4259b30SLisandro Dalcin NULL, 1369f4259b30SLisandro Dalcin NULL, 1370f4259b30SLisandro Dalcin /*139*/ NULL, 1371f4259b30SLisandro Dalcin NULL, 1372f4259b30SLisandro Dalcin NULL, 1373dec0b466SHong Zhang NULL}; 13748965ea79SLois Curfman McInnes 137566976f2fSJacob Faibussowitsch static PetscErrorCode MatMPIDenseSetPreallocation_MPIDense(Mat mat, PetscScalar *data) 1376d71ae5a4SJacob Faibussowitsch { 1377637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 137847d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 1379a23d5eceSKris Buschelman 1380a23d5eceSKris Buschelman PetscFunctionBegin; 138128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 13829566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->rmap)); 13839566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->cmap)); 1384637a0070SStefano Zampini if (!a->A) { 13859566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 13869566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, mat->rmap->n, mat->cmap->N, mat->rmap->n, mat->cmap->N)); 1387637a0070SStefano Zampini } 138847d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 138947d993e7Ssuyashtn PetscBool iscuda; 13909566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSECUDA, &iscuda)); 139147d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 139247d993e7Ssuyashtn #endif 139347d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 139447d993e7Ssuyashtn PetscBool iship; 139547d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSEHIP, &iship)); 139647d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 139747d993e7Ssuyashtn #endif 139847d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 13999566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(a->A, data)); 140047d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 14013faff063SStefano Zampini mat->offloadmask = a->A->offloadmask; 14023faff063SStefano Zampini #endif 1403637a0070SStefano Zampini mat->preallocated = PETSC_TRUE; 14046f08ad05SPierre Jolivet mat->assembled = PETSC_TRUE; 14053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1406a23d5eceSKris Buschelman } 1407a23d5eceSKris Buschelman 1408d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1409d71ae5a4SJacob Faibussowitsch { 14104e29119aSPierre Jolivet Mat B, C; 14114e29119aSPierre Jolivet 14124e29119aSPierre Jolivet PetscFunctionBegin; 14139566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMat(A, MAT_INITIAL_MATRIX, &C)); 14149566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqDense(C, MATSEQDENSE, MAT_INITIAL_MATRIX, &B)); 14159566063dSJacob Faibussowitsch PetscCall(MatDestroy(&C)); 14164e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14174e29119aSPierre Jolivet C = *newmat; 14184e29119aSPierre Jolivet } else C = NULL; 14199566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14209566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 14214e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 14229566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 14234e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 14243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14254e29119aSPierre Jolivet } 14264e29119aSPierre Jolivet 142766976f2fSJacob Faibussowitsch static PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1428d71ae5a4SJacob Faibussowitsch { 14294e29119aSPierre Jolivet Mat B, C; 14304e29119aSPierre Jolivet 14314e29119aSPierre Jolivet PetscFunctionBegin; 14329566063dSJacob Faibussowitsch PetscCall(MatDenseGetLocalMatrix(A, &C)); 14339566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqDense_SeqAIJ(C, MATSEQAIJ, MAT_INITIAL_MATRIX, &B)); 14344e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14354e29119aSPierre Jolivet C = *newmat; 14364e29119aSPierre Jolivet } else C = NULL; 14379566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14389566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 14394e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 14409566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 14414e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 14423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14434e29119aSPierre Jolivet } 14444e29119aSPierre Jolivet 144565b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 1446d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1447d71ae5a4SJacob Faibussowitsch { 1448f709e8d7SPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14498ea901baSHong Zhang Mat mat_elemental; 145032d7a744SHong Zhang PetscScalar *v; 1451f709e8d7SPierre Jolivet PetscInt m = A->rmap->n, N = A->cmap->N, rstart = A->rmap->rstart, i, *rows, *cols, lda; 14528ea901baSHong Zhang 14538baccfbdSHong Zhang PetscFunctionBegin; 1454378336b6SHong Zhang if (reuse == MAT_REUSE_MATRIX) { 1455378336b6SHong Zhang mat_elemental = *newmat; 14569566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(*newmat)); 1457378336b6SHong Zhang } else { 14589566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental)); 14599566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat_elemental, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 14609566063dSJacob Faibussowitsch PetscCall(MatSetType(mat_elemental, MATELEMENTAL)); 14619566063dSJacob Faibussowitsch PetscCall(MatSetUp(mat_elemental)); 14629566063dSJacob Faibussowitsch PetscCall(MatSetOption(mat_elemental, MAT_ROW_ORIENTED, PETSC_FALSE)); 1463378336b6SHong Zhang } 1464378336b6SHong Zhang 14659566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &rows, N, &cols)); 146632d7a744SHong Zhang for (i = 0; i < N; i++) cols[i] = i; 146732d7a744SHong Zhang for (i = 0; i < m; i++) rows[i] = rstart + i; 14688ea901baSHong Zhang 1469637a0070SStefano Zampini /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */ 14709566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(A, &v)); 1471f709e8d7SPierre Jolivet PetscCall(MatDenseGetLDA(a->A, &lda)); 1472f709e8d7SPierre Jolivet if (lda == m) PetscCall(MatSetValues(mat_elemental, m, rows, N, cols, v, ADD_VALUES)); 1473f709e8d7SPierre Jolivet else { 1474f709e8d7SPierre Jolivet for (i = 0; i < N; i++) PetscCall(MatSetValues(mat_elemental, m, rows, 1, &i, v + lda * i, ADD_VALUES)); 1475f709e8d7SPierre Jolivet } 14769566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY)); 14779566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY)); 14789566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(A, &v)); 14799566063dSJacob Faibussowitsch PetscCall(PetscFree2(rows, cols)); 14808ea901baSHong Zhang 1481511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 14829566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &mat_elemental)); 14838ea901baSHong Zhang } else { 14848ea901baSHong Zhang *newmat = mat_elemental; 14858ea901baSHong Zhang } 14863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14878baccfbdSHong Zhang } 148865b80a83SHong Zhang #endif 14898baccfbdSHong Zhang 1490d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A, PetscInt col, PetscScalar **vals) 1491d71ae5a4SJacob Faibussowitsch { 149286aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 149386aefd0dSHong Zhang 149486aefd0dSHong Zhang PetscFunctionBegin; 14959566063dSJacob Faibussowitsch PetscCall(MatDenseGetColumn(mat->A, col, vals)); 14963ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 149786aefd0dSHong Zhang } 149886aefd0dSHong Zhang 1499d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A, PetscScalar **vals) 1500d71ae5a4SJacob Faibussowitsch { 150186aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 150286aefd0dSHong Zhang 150386aefd0dSHong Zhang PetscFunctionBegin; 15049566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreColumn(mat->A, vals)); 15053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 150686aefd0dSHong Zhang } 150786aefd0dSHong Zhang 1508d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm, Mat inmat, PetscInt n, MatReuse scall, Mat *outmat) 1509d71ae5a4SJacob Faibussowitsch { 151094e2cb23SJakub Kruzik Mat_MPIDense *mat; 151194e2cb23SJakub Kruzik PetscInt m, nloc, N; 151294e2cb23SJakub Kruzik 151394e2cb23SJakub Kruzik PetscFunctionBegin; 15149566063dSJacob Faibussowitsch PetscCall(MatGetSize(inmat, &m, &N)); 15159566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(inmat, NULL, &nloc)); 151694e2cb23SJakub Kruzik if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */ 151794e2cb23SJakub Kruzik PetscInt sum; 151894e2cb23SJakub Kruzik 151948a46eb9SPierre Jolivet if (n == PETSC_DECIDE) PetscCall(PetscSplitOwnership(comm, &n, &N)); 152094e2cb23SJakub Kruzik /* Check sum(n) = N */ 1521462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(&n, &sum, 1, MPIU_INT, MPI_SUM, comm)); 152208401ef6SPierre Jolivet PetscCheck(sum == N, PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT, sum, N); 152394e2cb23SJakub Kruzik 15249566063dSJacob Faibussowitsch PetscCall(MatCreateDense(comm, m, n, PETSC_DETERMINE, N, NULL, outmat)); 15259566063dSJacob Faibussowitsch PetscCall(MatSetOption(*outmat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 152694e2cb23SJakub Kruzik } 152794e2cb23SJakub Kruzik 152894e2cb23SJakub Kruzik /* numeric phase */ 152994e2cb23SJakub Kruzik mat = (Mat_MPIDense *)(*outmat)->data; 15309566063dSJacob Faibussowitsch PetscCall(MatCopy(inmat, mat->A, SAME_NONZERO_PATTERN)); 15313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 153294e2cb23SJakub Kruzik } 153394e2cb23SJakub Kruzik 1534d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1535d71ae5a4SJacob Faibussowitsch { 15366947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15376947451fSStefano Zampini PetscInt lda; 15386947451fSStefano Zampini 15396947451fSStefano Zampini PetscFunctionBegin; 154028b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 154128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1542d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 15436947451fSStefano Zampini a->vecinuse = col + 1; 15449566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 15459566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, (PetscScalar **)&a->ptrinuse)); 15468e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 15476947451fSStefano Zampini *v = a->cvec; 15483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15496947451fSStefano Zampini } 15506947451fSStefano Zampini 1551d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1552d71ae5a4SJacob Faibussowitsch { 15536947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15546947451fSStefano Zampini 15556947451fSStefano Zampini PetscFunctionBegin; 155628b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 155728b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector"); 15584186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 15596947451fSStefano Zampini a->vecinuse = 0; 15609566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, (PetscScalar **)&a->ptrinuse)); 15619566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1562742765d3SMatthew Knepley if (v) *v = NULL; 15633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15646947451fSStefano Zampini } 15656947451fSStefano Zampini 1566d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1567d71ae5a4SJacob Faibussowitsch { 15686947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15696947451fSStefano Zampini PetscInt lda; 15706947451fSStefano Zampini 15716947451fSStefano Zampini PetscFunctionBegin; 157228b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 157328b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1574d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 15756947451fSStefano Zampini a->vecinuse = col + 1; 15769566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 15779566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &a->ptrinuse)); 15788e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 15799566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(a->cvec)); 15806947451fSStefano Zampini *v = a->cvec; 15813ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15826947451fSStefano Zampini } 15836947451fSStefano Zampini 1584d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1585d71ae5a4SJacob Faibussowitsch { 15866947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15876947451fSStefano Zampini 15886947451fSStefano Zampini PetscFunctionBegin; 15895f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 15905f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 15914186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 15926947451fSStefano Zampini a->vecinuse = 0; 15939566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &a->ptrinuse)); 15949566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(a->cvec)); 15959566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1596742765d3SMatthew Knepley if (v) *v = NULL; 15973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15986947451fSStefano Zampini } 15996947451fSStefano Zampini 1600d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1601d71ae5a4SJacob Faibussowitsch { 16026947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16036947451fSStefano Zampini PetscInt lda; 16046947451fSStefano Zampini 16056947451fSStefano Zampini PetscFunctionBegin; 16065f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 16075f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1608d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 16096947451fSStefano Zampini a->vecinuse = col + 1; 16109566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 16119566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 16128e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 16136947451fSStefano Zampini *v = a->cvec; 16143ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16156947451fSStefano Zampini } 16166947451fSStefano Zampini 1617d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1618d71ae5a4SJacob Faibussowitsch { 16196947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16206947451fSStefano Zampini 16216947451fSStefano Zampini PetscFunctionBegin; 16225f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 16235f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 16244186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 16256947451fSStefano Zampini a->vecinuse = 0; 16269566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 16279566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1628742765d3SMatthew Knepley if (v) *v = NULL; 16293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16306947451fSStefano Zampini } 16316947451fSStefano Zampini 163266976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A, PetscInt rbegin, PetscInt rend, PetscInt cbegin, PetscInt cend, Mat *v) 1633d71ae5a4SJacob Faibussowitsch { 16345ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1635616b8fbbSStefano Zampini Mat_MPIDense *c; 1636616b8fbbSStefano Zampini MPI_Comm comm; 1637d016bddeSToby Isaac PetscInt prbegin, prend, pcbegin, pcend; 16385ea7661aSPierre Jolivet 16395ea7661aSPierre Jolivet PetscFunctionBegin; 16409566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 16415f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 16425f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1643d016bddeSToby Isaac prbegin = PetscMax(0, PetscMin(A->rmap->rend, rbegin) - A->rmap->rstart); 1644d016bddeSToby Isaac prend = PetscMin(A->rmap->n, PetscMax(0, rend - A->rmap->rstart)); 1645d016bddeSToby Isaac pcbegin = PetscMax(0, PetscMin(A->cmap->rend, cbegin) - A->cmap->rstart); 1646d016bddeSToby Isaac pcend = PetscMin(A->cmap->n, PetscMax(0, cend - A->cmap->rstart)); 16475ea7661aSPierre Jolivet if (!a->cmat) { 16489566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &a->cmat)); 16499566063dSJacob Faibussowitsch PetscCall(MatSetType(a->cmat, ((PetscObject)A)->type_name)); 1650a2748737SPierre Jolivet if (rend - rbegin == A->rmap->N) PetscCall(PetscLayoutReference(A->rmap, &a->cmat->rmap)); 1651a2748737SPierre Jolivet else { 1652d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, prend - prbegin)); 1653a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1654a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1655a2748737SPierre Jolivet } 1656d016bddeSToby Isaac if (cend - cbegin == A->cmap->N) PetscCall(PetscLayoutReference(A->cmap, &a->cmat->cmap)); 1657d016bddeSToby Isaac else { 1658d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->cmap, pcend - pcbegin)); 16599566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 16609566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1661a2748737SPierre Jolivet } 1662616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 1663d016bddeSToby Isaac c->sub_rbegin = rbegin; 1664d016bddeSToby Isaac c->sub_rend = rend; 1665d016bddeSToby Isaac c->sub_cbegin = cbegin; 1666d016bddeSToby Isaac c->sub_cend = cend; 1667d016bddeSToby Isaac } 1668d016bddeSToby Isaac c = (Mat_MPIDense *)a->cmat->data; 1669d016bddeSToby Isaac if (c->sub_rbegin != rbegin || c->sub_rend != rend) { 1670d016bddeSToby Isaac PetscCall(PetscLayoutDestroy(&a->cmat->rmap)); 1671d016bddeSToby Isaac PetscCall(PetscLayoutCreate(comm, &a->cmat->rmap)); 1672d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, prend - prbegin)); 1673d016bddeSToby Isaac PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1674d016bddeSToby Isaac PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1675d016bddeSToby Isaac c->sub_rbegin = rbegin; 1676d016bddeSToby Isaac c->sub_rend = rend; 1677d016bddeSToby Isaac } 1678d016bddeSToby Isaac if (c->sub_cbegin != cbegin || c->sub_cend != cend) { 1679d016bddeSToby Isaac // special optimization: check if all columns are owned by rank 0, in which case no communication is necessary 1680d016bddeSToby Isaac if ((cend - cbegin != a->cmat->cmap->N) || (A->cmap->range[1] != A->cmap->N)) { 1681d016bddeSToby Isaac PetscCall(PetscLayoutDestroy(&a->cmat->cmap)); 1682d016bddeSToby Isaac PetscCall(PetscLayoutCreate(comm, &a->cmat->cmap)); 1683d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->cmap, pcend - pcbegin)); 1684d016bddeSToby Isaac PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 1685d016bddeSToby Isaac PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1686d016bddeSToby Isaac PetscCall(VecDestroy(&c->lvec)); 1687d016bddeSToby Isaac PetscCall(PetscSFDestroy(&c->Mvctx)); 1688d016bddeSToby Isaac } 1689d016bddeSToby Isaac c->sub_cbegin = cbegin; 1690d016bddeSToby Isaac c->sub_cend = cend; 1691d016bddeSToby Isaac } 16925f80ce2aSJacob Faibussowitsch PetscCheck(!c->A, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1693d016bddeSToby Isaac PetscCall(MatDenseGetSubMatrix(a->A, prbegin, prend, cbegin, cend, &c->A)); 16943faff063SStefano Zampini 1695616b8fbbSStefano Zampini a->cmat->preallocated = PETSC_TRUE; 1696616b8fbbSStefano Zampini a->cmat->assembled = PETSC_TRUE; 16973faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 16983faff063SStefano Zampini a->cmat->offloadmask = c->A->offloadmask; 16993faff063SStefano Zampini #endif 17005ea7661aSPierre Jolivet a->matinuse = cbegin + 1; 17015ea7661aSPierre Jolivet *v = a->cmat; 17023ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 17035ea7661aSPierre Jolivet } 17045ea7661aSPierre Jolivet 170566976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A, Mat *v) 1706d71ae5a4SJacob Faibussowitsch { 17075ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1708616b8fbbSStefano Zampini Mat_MPIDense *c; 17095ea7661aSPierre Jolivet 17105ea7661aSPierre Jolivet PetscFunctionBegin; 17115f80ce2aSJacob Faibussowitsch PetscCheck(a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetSubMatrix() first"); 17125f80ce2aSJacob Faibussowitsch PetscCheck(a->cmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal matrix"); 17135f80ce2aSJacob Faibussowitsch PetscCheck(*v == a->cmat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Not the matrix obtained from MatDenseGetSubMatrix()"); 17145ea7661aSPierre Jolivet a->matinuse = 0; 1715616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 17169566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreSubMatrix(a->A, &c->A)); 1717742765d3SMatthew Knepley if (v) *v = NULL; 17183faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 17193faff063SStefano Zampini A->offloadmask = a->A->offloadmask; 17203faff063SStefano Zampini #endif 17213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 17225ea7661aSPierre Jolivet } 17235ea7661aSPierre Jolivet 1724002bc6daSRichard Tran Mills /*MC 1725002bc6daSRichard Tran Mills MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices. 1726002bc6daSRichard Tran Mills 17272ef1f0ffSBarry Smith Options Database Key: 172811a5261eSBarry Smith . -mat_type mpidense - sets the matrix type to `MATMPIDENSE` during a call to `MatSetFromOptions()` 1729002bc6daSRichard Tran Mills 1730002bc6daSRichard Tran Mills Level: beginner 1731002bc6daSRichard Tran Mills 17321cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreateDense()`, `MATSEQDENSE`, `MATDENSE` 1733002bc6daSRichard Tran Mills M*/ 17344742e46bSJacob Faibussowitsch PetscErrorCode MatCreate_MPIDense(Mat mat) 1735d71ae5a4SJacob Faibussowitsch { 1736273d9f13SBarry Smith Mat_MPIDense *a; 1737273d9f13SBarry Smith 1738273d9f13SBarry Smith PetscFunctionBegin; 17394dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&a)); 1740b0a32e0cSBarry Smith mat->data = (void *)a; 1741aea10558SJacob Faibussowitsch mat->ops[0] = MatOps_Values; 1742273d9f13SBarry Smith 1743273d9f13SBarry Smith mat->insertmode = NOT_SET_VALUES; 1744273d9f13SBarry Smith 1745273d9f13SBarry Smith /* build cache for off array entries formed */ 1746273d9f13SBarry Smith a->donotstash = PETSC_FALSE; 17472205254eSKarl Rupp 17489566063dSJacob Faibussowitsch PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat), 1, &mat->stash)); 1749273d9f13SBarry Smith 1750273d9f13SBarry Smith /* stuff used for matrix vector multiply */ 1751f4259b30SLisandro Dalcin a->lvec = NULL; 1752f4259b30SLisandro Dalcin a->Mvctx = NULL; 1753273d9f13SBarry Smith a->roworiented = PETSC_TRUE; 1754273d9f13SBarry Smith 17559566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", MatDenseGetLDA_MPIDense)); 17569566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", MatDenseSetLDA_MPIDense)); 17579566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", MatDenseGetArray_MPIDense)); 17589566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", MatDenseRestoreArray_MPIDense)); 17599566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", MatDenseGetArrayRead_MPIDense)); 17609566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", MatDenseRestoreArrayRead_MPIDense)); 17619566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", MatDenseGetArrayWrite_MPIDense)); 17629566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", MatDenseRestoreArrayWrite_MPIDense)); 17639566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", MatDensePlaceArray_MPIDense)); 17649566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", MatDenseResetArray_MPIDense)); 17659566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", MatDenseReplaceArray_MPIDense)); 17669566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense)); 17679566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense)); 17689566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense)); 17699566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense)); 17709566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense)); 17719566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense)); 17729566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", MatDenseGetSubMatrix_MPIDense)); 17739566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", MatDenseRestoreSubMatrix_MPIDense)); 17749566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", MatConvert_MPIAIJ_MPIDense)); 17759566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", MatConvert_MPIDense_MPIAIJ)); 17768baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 17779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", MatConvert_MPIDense_Elemental)); 17788baccfbdSHong Zhang #endif 1779d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 17809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", MatConvert_Dense_ScaLAPACK)); 1781d24d4204SJose E. Roman #endif 1782637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 17839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", MatConvert_MPIDense_MPIDenseCUDA)); 1784637a0070SStefano Zampini #endif 17859566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", MatMPIDenseSetPreallocation_MPIDense)); 17869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 17879566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 17886718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 17899566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 17909566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 17916718818eSStefano Zampini #endif 179247d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 179347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", MatConvert_MPIDense_MPIDenseHIP)); 179447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 179547d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 179647d993e7Ssuyashtn #endif 17979566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", MatDenseGetColumn_MPIDense)); 17989566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", MatDenseRestoreColumn_MPIDense)); 1799d016bddeSToby Isaac PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultColumnRange_C", MatMultColumnRange_MPIDense)); 18000be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultAddColumnRange_C", MatMultAddColumnRange_MPIDense)); 18010be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeColumnRange_C", MatMultHermitianTransposeColumnRange_MPIDense)); 18020be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeAddColumnRange_C", MatMultHermitianTransposeAddColumnRange_MPIDense)); 18039566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATMPIDENSE)); 18043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1805273d9f13SBarry Smith } 1806273d9f13SBarry Smith 1807209238afSKris Buschelman /*MC 1808002d173eSKris Buschelman MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices. 1809209238afSKris Buschelman 181011a5261eSBarry Smith This matrix type is identical to `MATSEQDENSE` when constructed with a single process communicator, 181111a5261eSBarry Smith and `MATMPIDENSE` otherwise. 1812209238afSKris Buschelman 18132ef1f0ffSBarry Smith Options Database Key: 181411a5261eSBarry Smith . -mat_type dense - sets the matrix type to `MATDENSE` during a call to `MatSetFromOptions()` 1815209238afSKris Buschelman 1816209238afSKris Buschelman Level: beginner 1817209238afSKris Buschelman 18181cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATSEQDENSE`, `MATMPIDENSE`, `MATDENSECUDA`, `MATDENSEHIP` 18196947451fSStefano Zampini M*/ 18206947451fSStefano Zampini 18215d83a8b1SBarry Smith /*@ 1822273d9f13SBarry Smith MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries 1823273d9f13SBarry Smith 18248f490ea3SStefano Zampini Collective 1825273d9f13SBarry Smith 1826273d9f13SBarry Smith Input Parameters: 1827fe59aa6dSJacob Faibussowitsch + B - the matrix 18282ef1f0ffSBarry Smith - data - optional location of matrix data. Set to `NULL` for PETSc 1829273d9f13SBarry Smith to control all matrix memory allocation. 1830273d9f13SBarry Smith 18312ef1f0ffSBarry Smith Level: intermediate 18322ef1f0ffSBarry Smith 1833273d9f13SBarry Smith Notes: 18342ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 1835273d9f13SBarry Smith storage by columns. 1836273d9f13SBarry Smith 1837273d9f13SBarry Smith The data input variable is intended primarily for Fortran programmers 1838273d9f13SBarry Smith who wish to allocate their own matrix memory space. Most users should 18392ef1f0ffSBarry Smith set `data` to `NULL`. 1840273d9f13SBarry Smith 18411cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMPIDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 1842273d9f13SBarry Smith @*/ 1843d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMPIDenseSetPreallocation(Mat B, PetscScalar *data) 1844d71ae5a4SJacob Faibussowitsch { 1845273d9f13SBarry Smith PetscFunctionBegin; 1846d5ea218eSStefano Zampini PetscValidHeaderSpecific(B, MAT_CLASSID, 1); 1847cac4c232SBarry Smith PetscTryMethod(B, "MatMPIDenseSetPreallocation_C", (Mat, PetscScalar *), (B, data)); 18483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1849273d9f13SBarry Smith } 1850273d9f13SBarry Smith 1851d3042a70SBarry Smith /*@ 185211a5261eSBarry Smith MatDensePlaceArray - Allows one to replace the array in a `MATDENSE` matrix with an 1853d3042a70SBarry Smith array provided by the user. This is useful to avoid copying an array 1854d3042a70SBarry Smith into a matrix 1855d3042a70SBarry Smith 1856d3042a70SBarry Smith Not Collective 1857d3042a70SBarry Smith 1858d3042a70SBarry Smith Input Parameters: 1859d3042a70SBarry Smith + mat - the matrix 1860d3042a70SBarry Smith - array - the array in column major order 1861d3042a70SBarry Smith 18622ef1f0ffSBarry Smith Level: developer 18632ef1f0ffSBarry Smith 186411a5261eSBarry Smith Note: 18654d5500e8SJunchao Zhang Adding `const` to `array` was an oversight, see notes in `VecPlaceArray()`. 18664d5500e8SJunchao Zhang 186711a5261eSBarry Smith You can return to the original array with a call to `MatDenseResetArray()`. The user is responsible for freeing this array; it will not be 1868d3042a70SBarry Smith freed when the matrix is destroyed. 1869d3042a70SBarry Smith 18701cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`, 187111a5261eSBarry Smith `MatDenseReplaceArray()` 1872d3042a70SBarry Smith @*/ 1873d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDensePlaceArray(Mat mat, const PetscScalar *array) 1874d71ae5a4SJacob Faibussowitsch { 1875d3042a70SBarry Smith PetscFunctionBegin; 1876d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1877cac4c232SBarry Smith PetscUseMethod(mat, "MatDensePlaceArray_C", (Mat, const PetscScalar *), (mat, array)); 18789566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 187947d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1880637a0070SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1881637a0070SStefano Zampini #endif 18823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1883d3042a70SBarry Smith } 1884d3042a70SBarry Smith 1885d3042a70SBarry Smith /*@ 188611a5261eSBarry Smith MatDenseResetArray - Resets the matrix array to that it previously had before the call to `MatDensePlaceArray()` 1887d3042a70SBarry Smith 1888d3042a70SBarry Smith Not Collective 1889d3042a70SBarry Smith 18902fe279fdSBarry Smith Input Parameter: 1891d3042a70SBarry Smith . mat - the matrix 1892d3042a70SBarry Smith 18932ef1f0ffSBarry Smith Level: developer 18942ef1f0ffSBarry Smith 189511a5261eSBarry Smith Note: 189611a5261eSBarry Smith You can only call this after a call to `MatDensePlaceArray()` 1897d3042a70SBarry Smith 18981cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()` 1899d3042a70SBarry Smith @*/ 1900d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseResetArray(Mat mat) 1901d71ae5a4SJacob Faibussowitsch { 1902d3042a70SBarry Smith PetscFunctionBegin; 1903d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1904cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseResetArray_C", (Mat), (mat)); 19059566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 19063ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1907d3042a70SBarry Smith } 1908d3042a70SBarry Smith 1909d5ea218eSStefano Zampini /*@ 1910d5ea218eSStefano Zampini MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an 1911d5ea218eSStefano Zampini array provided by the user. This is useful to avoid copying an array 1912d5ea218eSStefano Zampini into a matrix 1913d5ea218eSStefano Zampini 1914d5ea218eSStefano Zampini Not Collective 1915d5ea218eSStefano Zampini 1916d5ea218eSStefano Zampini Input Parameters: 1917d5ea218eSStefano Zampini + mat - the matrix 1918d5ea218eSStefano Zampini - array - the array in column major order 1919d5ea218eSStefano Zampini 19202ef1f0ffSBarry Smith Level: developer 19212ef1f0ffSBarry Smith 192211a5261eSBarry Smith Note: 19234d5500e8SJunchao Zhang Adding `const` to `array` was an oversight, see notes in `VecPlaceArray()`. 19244d5500e8SJunchao Zhang 192511a5261eSBarry Smith The memory passed in MUST be obtained with `PetscMalloc()` and CANNOT be 1926d5ea218eSStefano Zampini freed by the user. It will be freed when the matrix is destroyed. 1927d5ea218eSStefano Zampini 19281cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatDensePlaceArray()`, `MatDenseGetArray()`, `VecReplaceArray()` 1929d5ea218eSStefano Zampini @*/ 1930d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseReplaceArray(Mat mat, const PetscScalar *array) 1931d71ae5a4SJacob Faibussowitsch { 1932d5ea218eSStefano Zampini PetscFunctionBegin; 1933d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1934cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseReplaceArray_C", (Mat, const PetscScalar *), (mat, array)); 19359566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 193647d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1937d5ea218eSStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1938d5ea218eSStefano Zampini #endif 19393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1940d5ea218eSStefano Zampini } 1941d5ea218eSStefano Zampini 19425d83a8b1SBarry Smith /*@ 194311a5261eSBarry Smith MatCreateDense - Creates a matrix in `MATDENSE` format. 19448965ea79SLois Curfman McInnes 1945d083f849SBarry Smith Collective 1946db81eaa0SLois Curfman McInnes 19478965ea79SLois Curfman McInnes Input Parameters: 1948db81eaa0SLois Curfman McInnes + comm - MPI communicator 19492ef1f0ffSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if `M` is given) 19502ef1f0ffSBarry Smith . n - number of local columns (or `PETSC_DECIDE` to have calculated if `N` is given) 19512ef1f0ffSBarry Smith . M - number of global rows (or `PETSC_DECIDE` to have calculated if `m` is given) 19522ef1f0ffSBarry Smith . N - number of global columns (or `PETSC_DECIDE` to have calculated if `n` is given) 19532ef1f0ffSBarry Smith - data - optional location of matrix data. Set data to `NULL` (`PETSC_NULL_SCALAR` for Fortran users) for PETSc 1954dfc5480cSLois Curfman McInnes to control all matrix memory allocation. 19558965ea79SLois Curfman McInnes 19568965ea79SLois Curfman McInnes Output Parameter: 1957477f1c0bSLois Curfman McInnes . A - the matrix 19588965ea79SLois Curfman McInnes 19592ef1f0ffSBarry Smith Level: intermediate 19602ef1f0ffSBarry Smith 1961b259b22eSLois Curfman McInnes Notes: 19622ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 196339ddd567SLois Curfman McInnes storage by columns. 196411a5261eSBarry Smith 196511a5261eSBarry Smith Although local portions of the matrix are stored in column-major 1966002bc6daSRichard Tran Mills order, the matrix is partitioned across MPI ranks by row. 19678965ea79SLois Curfman McInnes 196818f449edSLois Curfman McInnes The data input variable is intended primarily for Fortran programmers 196918f449edSLois Curfman McInnes who wish to allocate their own matrix memory space. Most users should 19702ef1f0ffSBarry Smith set `data` to `NULL` (`PETSC_NULL_SCALAR` for Fortran users). 197118f449edSLois Curfman McInnes 19728965ea79SLois Curfman McInnes The user MUST specify either the local or global matrix dimensions 19738965ea79SLois Curfman McInnes (possibly both). 19748965ea79SLois Curfman McInnes 19751cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 19768965ea79SLois Curfman McInnes @*/ 1977ce78bad3SBarry Smith PetscErrorCode MatCreateDense(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar data[], Mat *A) 1978d71ae5a4SJacob Faibussowitsch { 19793a40ed3dSBarry Smith PetscFunctionBegin; 19809566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 19819566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, M, N)); 19826f08ad05SPierre Jolivet PetscCall(MatSetType(*A, MATDENSE)); 19839566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(*A, data)); 19846f08ad05SPierre Jolivet PetscCall(MatMPIDenseSetPreallocation(*A, data)); 19853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19868965ea79SLois Curfman McInnes } 19878965ea79SLois Curfman McInnes 1988d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDuplicate_MPIDense(Mat A, MatDuplicateOption cpvalues, Mat *newmat) 1989d71ae5a4SJacob Faibussowitsch { 19908965ea79SLois Curfman McInnes Mat mat; 19913501a2bdSLois Curfman McInnes Mat_MPIDense *a, *oldmat = (Mat_MPIDense *)A->data; 19928965ea79SLois Curfman McInnes 19933a40ed3dSBarry Smith PetscFunctionBegin; 1994f4259b30SLisandro Dalcin *newmat = NULL; 19959566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat)); 19969566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 19979566063dSJacob Faibussowitsch PetscCall(MatSetType(mat, ((PetscObject)A)->type_name)); 1998834f8fabSBarry Smith a = (Mat_MPIDense *)mat->data; 19995aa7edbeSHong Zhang 2000d5f3da31SBarry Smith mat->factortype = A->factortype; 2001c456f294SBarry Smith mat->assembled = PETSC_TRUE; 2002273d9f13SBarry Smith mat->preallocated = PETSC_TRUE; 20038965ea79SLois Curfman McInnes 2004e0fa3b82SLois Curfman McInnes mat->insertmode = NOT_SET_VALUES; 20053782ba37SSatish Balay a->donotstash = oldmat->donotstash; 2006e04c1aa4SHong Zhang 20079566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->rmap, &mat->rmap)); 20089566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->cmap, &mat->cmap)); 20098965ea79SLois Curfman McInnes 20109566063dSJacob Faibussowitsch PetscCall(MatDuplicate(oldmat->A, cpvalues, &a->A)); 201101b82886SBarry Smith 20128965ea79SLois Curfman McInnes *newmat = mat; 20133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20148965ea79SLois Curfman McInnes } 20158965ea79SLois Curfman McInnes 201666976f2fSJacob Faibussowitsch static PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer) 2017d71ae5a4SJacob Faibussowitsch { 201887d5ce66SSatish Balay PetscBool isbinary; 201987d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 202087d5ce66SSatish Balay PetscBool ishdf5; 202187d5ce66SSatish Balay #endif 2022eb91f321SVaclav Hapla 2023eb91f321SVaclav Hapla PetscFunctionBegin; 2024eb91f321SVaclav Hapla PetscValidHeaderSpecific(newMat, MAT_CLASSID, 1); 2025eb91f321SVaclav Hapla PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 2026eb91f321SVaclav Hapla /* force binary viewer to load .info file if it has not yet done so */ 20279566063dSJacob Faibussowitsch PetscCall(PetscViewerSetUp(viewer)); 20289566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 202987d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 20309566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERHDF5, &ishdf5)); 203187d5ce66SSatish Balay #endif 2032eb91f321SVaclav Hapla if (isbinary) { 20339566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_Binary(newMat, viewer)); 2034eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5) 203587d5ce66SSatish Balay } else if (ishdf5) { 20369566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_HDF5(newMat, viewer)); 2037eb91f321SVaclav Hapla #endif 203898921bdaSJacob Faibussowitsch } else SETERRQ(PetscObjectComm((PetscObject)newMat), PETSC_ERR_SUP, "Viewer type %s not yet supported for reading %s matrices", ((PetscObject)viewer)->type_name, ((PetscObject)newMat)->type_name); 20393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2040eb91f321SVaclav Hapla } 2041eb91f321SVaclav Hapla 2042d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatEqual_MPIDense(Mat A, Mat B, PetscBool *flag) 2043d71ae5a4SJacob Faibussowitsch { 20446e4ee0c6SHong Zhang Mat_MPIDense *matB = (Mat_MPIDense *)B->data, *matA = (Mat_MPIDense *)A->data; 20456e4ee0c6SHong Zhang Mat a, b; 204690ace30eSBarry Smith 20476e4ee0c6SHong Zhang PetscFunctionBegin; 20486e4ee0c6SHong Zhang a = matA->A; 20496e4ee0c6SHong Zhang b = matB->A; 20502cf15c64SPierre Jolivet PetscCall(MatEqual(a, b, flag)); 2051462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, flag, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 20523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20536e4ee0c6SHong Zhang } 205490ace30eSBarry Smith 205566976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data) 2056d71ae5a4SJacob Faibussowitsch { 20576718818eSStefano Zampini Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data; 2058baa3c1c6SHong Zhang 2059baa3c1c6SHong Zhang PetscFunctionBegin; 20609566063dSJacob Faibussowitsch PetscCall(PetscFree2(atb->sendbuf, atb->recvcounts)); 20619566063dSJacob Faibussowitsch PetscCall(MatDestroy(&atb->atb)); 20629566063dSJacob Faibussowitsch PetscCall(PetscFree(atb)); 20633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2064baa3c1c6SHong Zhang } 2065baa3c1c6SHong Zhang 206666976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data) 2067d71ae5a4SJacob Faibussowitsch { 20686718818eSStefano Zampini Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data; 2069cc48ffa7SToby Isaac 2070cc48ffa7SToby Isaac PetscFunctionBegin; 20719566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->buf[0], abt->buf[1])); 20729566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->recvcounts, abt->recvdispls)); 20739566063dSJacob Faibussowitsch PetscCall(PetscFree(abt)); 20743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2075cc48ffa7SToby Isaac } 2076cc48ffa7SToby Isaac 2077d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2078d71ae5a4SJacob Faibussowitsch { 2079baa3c1c6SHong Zhang Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 20806718818eSStefano Zampini Mat_TransMatMultDense *atb; 2081cb20be35SHong Zhang MPI_Comm comm; 20826718818eSStefano Zampini PetscMPIInt size, *recvcounts; 20836718818eSStefano Zampini PetscScalar *carray, *sendbuf; 2084637a0070SStefano Zampini const PetscScalar *atbarray; 2085a1f9a5e6SStefano Zampini PetscInt i, cN = C->cmap->N, proc, k, j, lda; 2086e68c0b26SHong Zhang const PetscInt *ranges; 2087cb20be35SHong Zhang 2088cb20be35SHong Zhang PetscFunctionBegin; 20896718818eSStefano Zampini MatCheckProduct(C, 3); 20905f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 20916718818eSStefano Zampini atb = (Mat_TransMatMultDense *)C->product->data; 20926718818eSStefano Zampini recvcounts = atb->recvcounts; 20936718818eSStefano Zampini sendbuf = atb->sendbuf; 20946718818eSStefano Zampini 20959566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 20969566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 2097e68c0b26SHong Zhang 2098c5ef1628SHong Zhang /* compute atbarray = aseq^T * bseq */ 2099fb842aefSJose E. Roman PetscCall(MatTransposeMatMult(a->A, b->A, atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX, PETSC_DETERMINE, &atb->atb)); 2100cb20be35SHong Zhang 21019566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 2102cb20be35SHong Zhang 2103d016bddeSToby Isaac if (ranges[1] == C->rmap->N) { 2104d016bddeSToby Isaac /* all of the values are being reduced to rank 0: optimize this case to use MPI_Reduce and GPU aware MPI if available */ 2105d016bddeSToby Isaac PetscInt atb_lda, c_lda; 2106d016bddeSToby Isaac Mat atb_local = atb->atb; 2107d016bddeSToby Isaac Mat atb_alloc = NULL; 2108d016bddeSToby Isaac Mat c_local = c->A; 2109d016bddeSToby Isaac Mat c_alloc = NULL; 2110d016bddeSToby Isaac PetscMemType atb_memtype, c_memtype; 2111d016bddeSToby Isaac const PetscScalar *atb_array = NULL; 2112d016bddeSToby Isaac MPI_Datatype vector_type; 2113d016bddeSToby Isaac PetscScalar *c_array = NULL; 2114d016bddeSToby Isaac PetscMPIInt rank; 2115d016bddeSToby Isaac 2116d016bddeSToby Isaac PetscCallMPI(MPI_Comm_rank(comm, &rank)); 2117d016bddeSToby Isaac 2118d016bddeSToby Isaac PetscCall(MatDenseGetLDA(atb_local, &atb_lda)); 2119d016bddeSToby Isaac if (atb_lda != C->rmap->N) { 2120d016bddeSToby Isaac // copy atb to a matrix that will have lda == the number of rows 2121d016bddeSToby Isaac PetscCall(MatDuplicate(atb_local, MAT_DO_NOT_COPY_VALUES, &atb_alloc)); 2122d016bddeSToby Isaac PetscCall(MatCopy(atb_local, atb_alloc, DIFFERENT_NONZERO_PATTERN)); 2123d016bddeSToby Isaac atb_local = atb_alloc; 2124d016bddeSToby Isaac } 2125d016bddeSToby Isaac 2126d016bddeSToby Isaac if (rank == 0) { 2127d016bddeSToby Isaac PetscCall(MatDenseGetLDA(c_local, &c_lda)); 2128d016bddeSToby Isaac if (c_lda != C->rmap->N) { 2129d016bddeSToby Isaac // copy c to a matrix that will have lda == the number of rows 2130d016bddeSToby Isaac PetscCall(MatDuplicate(c_local, MAT_DO_NOT_COPY_VALUES, &c_alloc)); 2131d016bddeSToby Isaac c_local = c_alloc; 2132d016bddeSToby Isaac } 2133d016bddeSToby Isaac PetscCall(MatZeroEntries(c_local)); 2134d016bddeSToby Isaac } 2135d016bddeSToby Isaac /* atb_local and c_local have nrows = lda = A->cmap->N and ncols = 2136d016bddeSToby Isaac * B->cmap->N: use the a->Mvctx to use the best reduction method */ 2137d016bddeSToby Isaac if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 2138d016bddeSToby Isaac vector_type = MPIU_SCALAR; 2139d016bddeSToby Isaac if (B->cmap->N > 1) { 2140b682a77bSToby Isaac PetscMPIInt mpi_N; 2141b682a77bSToby Isaac 2142b682a77bSToby Isaac PetscCall(PetscMPIIntCast(B->cmap->N, &mpi_N)); 2143b682a77bSToby Isaac PetscCallMPI(MPI_Type_contiguous(mpi_N, MPIU_SCALAR, &vector_type)); 2144d016bddeSToby Isaac PetscCallMPI(MPI_Type_commit(&vector_type)); 2145d016bddeSToby Isaac } 2146d016bddeSToby Isaac PetscCall(MatDenseGetArrayReadAndMemType(atb_local, &atb_array, &atb_memtype)); 2147d016bddeSToby Isaac PetscCall(MatDenseGetArrayWriteAndMemType(c_local, &c_array, &c_memtype)); 2148d016bddeSToby Isaac PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, vector_type, atb_memtype, atb_array, c_memtype, c_array, MPIU_SUM)); 2149d016bddeSToby Isaac PetscCall(PetscSFReduceEnd(a->Mvctx, vector_type, atb_array, c_array, MPIU_SUM)); 2150d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayWriteAndMemType(c_local, &c_array)); 2151d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayReadAndMemType(atb_local, &atb_array)); 2152d016bddeSToby Isaac if (rank == 0 && c_local != c->A) PetscCall(MatCopy(c_local, c->A, DIFFERENT_NONZERO_PATTERN)); 2153d016bddeSToby Isaac if (B->cmap->N > 1) PetscCallMPI(MPI_Type_free(&vector_type)); 2154d016bddeSToby Isaac PetscCall(MatDestroy(&atb_alloc)); 2155d016bddeSToby Isaac PetscCall(MatDestroy(&c_alloc)); 2156d016bddeSToby Isaac PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 2157d016bddeSToby Isaac PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 2158d016bddeSToby Isaac PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 2159d016bddeSToby Isaac PetscFunctionReturn(PETSC_SUCCESS); 2160d016bddeSToby Isaac } 2161d016bddeSToby Isaac 2162660d5466SHong Zhang /* arrange atbarray into sendbuf */ 21639566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(atb->atb, &atbarray)); 21649566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(atb->atb, &lda)); 2165637a0070SStefano Zampini for (proc = 0, k = 0; proc < size; proc++) { 2166baa3c1c6SHong Zhang for (j = 0; j < cN; j++) { 2167a1f9a5e6SStefano Zampini for (i = ranges[proc]; i < ranges[proc + 1]; i++) sendbuf[k++] = atbarray[i + j * lda]; 2168cb20be35SHong Zhang } 2169cb20be35SHong Zhang } 21709566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(atb->atb, &atbarray)); 2171637a0070SStefano Zampini 2172c5ef1628SHong Zhang /* sum all atbarray to local values of C */ 21739566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &carray)); 21749566063dSJacob Faibussowitsch PetscCallMPI(MPI_Reduce_scatter(sendbuf, carray, recvcounts, MPIU_SCALAR, MPIU_SUM, comm)); 21759566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &carray)); 217667af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 21779566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 21789566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 21793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2180cb20be35SHong Zhang } 2181cb20be35SHong Zhang 2182d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2183d71ae5a4SJacob Faibussowitsch { 2184cb20be35SHong Zhang MPI_Comm comm; 2185baa3c1c6SHong Zhang PetscMPIInt size; 2186660d5466SHong Zhang PetscInt cm = A->cmap->n, cM, cN = B->cmap->N; 2187baa3c1c6SHong Zhang Mat_TransMatMultDense *atb; 218847d993e7Ssuyashtn PetscBool cisdense = PETSC_FALSE; 21890acaeb71SStefano Zampini const PetscInt *ranges; 2190cb20be35SHong Zhang 2191cb20be35SHong Zhang PetscFunctionBegin; 21928f83a4d9SJacob Faibussowitsch MatCheckProduct(C, 4); 21935f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 21949566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 2195cb20be35SHong Zhang if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) { 219698921bdaSJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2197cb20be35SHong Zhang } 2198cb20be35SHong Zhang 21994222ddf1SHong Zhang /* create matrix product C */ 22009566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, cm, B->cmap->n, A->cmap->N, B->cmap->N)); 220147d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 22029566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSECUDA, "")); 220347d993e7Ssuyashtn #endif 220447d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 220547d993e7Ssuyashtn PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSEHIP, "")); 220647d993e7Ssuyashtn #endif 220748a46eb9SPierre Jolivet if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)A)->type_name)); 22089566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2209baa3c1c6SHong Zhang 22104222ddf1SHong Zhang /* create data structure for reuse C */ 22119566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22129566063dSJacob Faibussowitsch PetscCall(PetscNew(&atb)); 22134222ddf1SHong Zhang cM = C->rmap->N; 22149566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(cM * cN, &atb->sendbuf, size, &atb->recvcounts)); 22159566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 22166497c311SBarry Smith for (PetscMPIInt i = 0; i < size; i++) PetscCall(PetscMPIIntCast((ranges[i + 1] - ranges[i]) * cN, &atb->recvcounts[i])); 22176718818eSStefano Zampini C->product->data = atb; 22186718818eSStefano Zampini C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense; 22193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2220cb20be35SHong Zhang } 2221cb20be35SHong Zhang 2222d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2223d71ae5a4SJacob Faibussowitsch { 2224cc48ffa7SToby Isaac MPI_Comm comm; 2225cc48ffa7SToby Isaac PetscMPIInt i, size; 2226cc48ffa7SToby Isaac PetscInt maxRows, bufsiz; 2227cc48ffa7SToby Isaac PetscMPIInt tag; 22284222ddf1SHong Zhang PetscInt alg; 2229cc48ffa7SToby Isaac Mat_MatTransMultDense *abt; 22304222ddf1SHong Zhang Mat_Product *product = C->product; 22314222ddf1SHong Zhang PetscBool flg; 2232cc48ffa7SToby Isaac 2233cc48ffa7SToby Isaac PetscFunctionBegin; 22346718818eSStefano Zampini MatCheckProduct(C, 4); 22355f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 22364222ddf1SHong Zhang /* check local size of A and B */ 22375f80ce2aSJacob Faibussowitsch PetscCheck(A->cmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")", A->cmap->n, B->cmap->n); 2238cc48ffa7SToby Isaac 22399566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "allgatherv", &flg)); 2240637a0070SStefano Zampini alg = flg ? 0 : 1; 2241cc48ffa7SToby Isaac 22424222ddf1SHong Zhang /* setup matrix product C */ 22439566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, A->rmap->n, B->rmap->n, A->rmap->N, B->rmap->N)); 22449566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATMPIDENSE)); 22459566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 22469566063dSJacob Faibussowitsch PetscCall(PetscObjectGetNewTag((PetscObject)C, &tag)); 22474222ddf1SHong Zhang 22484222ddf1SHong Zhang /* create data structure for reuse C */ 22499566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 22509566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22519566063dSJacob Faibussowitsch PetscCall(PetscNew(&abt)); 2252cc48ffa7SToby Isaac abt->tag = tag; 2253faa55883SToby Isaac abt->alg = alg; 2254faa55883SToby Isaac switch (alg) { 22554222ddf1SHong Zhang case 1: /* alg: "cyclic" */ 225657508eceSPierre Jolivet for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, B->rmap->range[i + 1] - B->rmap->range[i]); 2257cc48ffa7SToby Isaac bufsiz = A->cmap->N * maxRows; 2258f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(bufsiz, &abt->buf[0], bufsiz, &abt->buf[1])); 2259faa55883SToby Isaac break; 22604222ddf1SHong Zhang default: /* alg: "allgatherv" */ 2261f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &abt->buf[0], B->rmap->N * B->cmap->N, &abt->buf[1])); 2262f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(size, &abt->recvcounts, size + 1, &abt->recvdispls)); 22636497c311SBarry Smith for (i = 0; i <= size; i++) PetscCall(PetscMPIIntCast(B->rmap->range[i] * A->cmap->N, &abt->recvdispls[i])); 22646497c311SBarry Smith for (i = 0; i < size; i++) PetscCall(PetscMPIIntCast(abt->recvdispls[i + 1] - abt->recvdispls[i], &abt->recvcounts[i])); 2265faa55883SToby Isaac break; 2266faa55883SToby Isaac } 2267cc48ffa7SToby Isaac 22686718818eSStefano Zampini C->product->data = abt; 22696718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense; 22704222ddf1SHong Zhang C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense; 22713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2272cc48ffa7SToby Isaac } 2273cc48ffa7SToby Isaac 2274d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C) 2275d71ae5a4SJacob Faibussowitsch { 2276cc48ffa7SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 22776718818eSStefano Zampini Mat_MatTransMultDense *abt; 2278cc48ffa7SToby Isaac MPI_Comm comm; 22796497c311SBarry Smith PetscMPIInt rank, size, sendto, recvfrom, recvisfrom; 2280f4259b30SLisandro Dalcin PetscScalar *sendbuf, *recvbuf = NULL, *cv; 22816497c311SBarry Smith PetscInt i, cK = A->cmap->N, sendsiz, recvsiz, k, j, bn; 2282cc48ffa7SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2283637a0070SStefano Zampini const PetscScalar *av, *bv; 228423fff9afSBarry Smith PetscBLASInt cm, cn, ck, alda, blda = 0, clda; 2285cc48ffa7SToby Isaac MPI_Request reqs[2]; 2286cc48ffa7SToby Isaac const PetscInt *ranges; 2287cc48ffa7SToby Isaac 2288cc48ffa7SToby Isaac PetscFunctionBegin; 22896718818eSStefano Zampini MatCheckProduct(C, 3); 22905f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 22916718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 22929566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 22939566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 22949566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22959566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 22969566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 22979566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 22989566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 22999566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 23009566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &i)); 23019566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &blda)); 23029566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 23039566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 23049566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(B, &ranges)); 2305cc48ffa7SToby Isaac bn = B->rmap->n; 2306637a0070SStefano Zampini if (blda == bn) { 2307637a0070SStefano Zampini sendbuf = (PetscScalar *)bv; 2308cc48ffa7SToby Isaac } else { 2309cc48ffa7SToby Isaac sendbuf = abt->buf[0]; 2310cc48ffa7SToby Isaac for (k = 0, i = 0; i < cK; i++) { 2311ad540459SPierre Jolivet for (j = 0; j < bn; j++, k++) sendbuf[k] = bv[i * blda + j]; 2312cc48ffa7SToby Isaac } 2313cc48ffa7SToby Isaac } 2314cc48ffa7SToby Isaac if (size > 1) { 2315cc48ffa7SToby Isaac sendto = (rank + size - 1) % size; 2316cc48ffa7SToby Isaac recvfrom = (rank + size + 1) % size; 2317cc48ffa7SToby Isaac } else { 2318cc48ffa7SToby Isaac sendto = recvfrom = 0; 2319cc48ffa7SToby Isaac } 23209566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 23219566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 2322cc48ffa7SToby Isaac recvisfrom = rank; 2323cc48ffa7SToby Isaac for (i = 0; i < size; i++) { 2324cc48ffa7SToby Isaac /* we have finished receiving in sending, bufs can be read/modified */ 23256497c311SBarry Smith PetscMPIInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */ 2326cc48ffa7SToby Isaac PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom]; 2327cc48ffa7SToby Isaac 2328cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2329cc48ffa7SToby Isaac /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */ 2330cc48ffa7SToby Isaac sendsiz = cK * bn; 2331cc48ffa7SToby Isaac recvsiz = cK * nextbn; 2332cc48ffa7SToby Isaac recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1]; 23336497c311SBarry Smith PetscCallMPI(MPIU_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0])); 23346497c311SBarry Smith PetscCallMPI(MPIU_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1])); 2335cc48ffa7SToby Isaac } 2336cc48ffa7SToby Isaac 2337cc48ffa7SToby Isaac /* local aseq * sendbuf^T */ 23389566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn)); 2339792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "T", &cm, &cn, &ck, &_DOne, av, &alda, sendbuf, &cn, &_DZero, cv + clda * ranges[recvisfrom], &clda)); 2340cc48ffa7SToby Isaac 2341cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2342cc48ffa7SToby Isaac /* wait for the sends and receives to complete, swap sendbuf and recvbuf */ 23439566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE)); 2344cc48ffa7SToby Isaac } 2345cc48ffa7SToby Isaac bn = nextbn; 2346cc48ffa7SToby Isaac recvisfrom = nextrecvisfrom; 2347cc48ffa7SToby Isaac sendbuf = recvbuf; 2348cc48ffa7SToby Isaac } 23499566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 23509566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 23519566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 235267af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 23539566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 23549566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 23553ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2356cc48ffa7SToby Isaac } 2357cc48ffa7SToby Isaac 2358d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C) 2359d71ae5a4SJacob Faibussowitsch { 2360faa55883SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 23616718818eSStefano Zampini Mat_MatTransMultDense *abt; 2362faa55883SToby Isaac MPI_Comm comm; 23636497c311SBarry Smith PetscMPIInt size, ibn; 2364637a0070SStefano Zampini PetscScalar *cv, *sendbuf, *recvbuf; 2365637a0070SStefano Zampini const PetscScalar *av, *bv; 2366637a0070SStefano Zampini PetscInt blda, i, cK = A->cmap->N, k, j, bn; 2367faa55883SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2368637a0070SStefano Zampini PetscBLASInt cm, cn, ck, alda, clda; 2369faa55883SToby Isaac 2370faa55883SToby Isaac PetscFunctionBegin; 23716718818eSStefano Zampini MatCheckProduct(C, 3); 23725f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 23736718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 23749566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 23759566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 23769566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 23779566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 23789566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 23799566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 23809566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 23819566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &blda)); 23829566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 23839566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 2384faa55883SToby Isaac /* copy transpose of B into buf[0] */ 2385faa55883SToby Isaac bn = B->rmap->n; 2386faa55883SToby Isaac sendbuf = abt->buf[0]; 2387faa55883SToby Isaac recvbuf = abt->buf[1]; 2388faa55883SToby Isaac for (k = 0, j = 0; j < bn; j++) { 2389ad540459SPierre Jolivet for (i = 0; i < cK; i++, k++) sendbuf[k] = bv[i * blda + j]; 2390faa55883SToby Isaac } 23919566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 23926497c311SBarry Smith PetscCall(PetscMPIIntCast(bn * cK, &ibn)); 23936497c311SBarry Smith PetscCallMPI(MPI_Allgatherv(sendbuf, ibn, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm)); 23949566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 23959566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 23969566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->cmap->n, &cn)); 2397792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "N", &cm, &cn, &ck, &_DOne, av, &alda, recvbuf, &ck, &_DZero, cv, &clda)); 23989566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 23999566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 24009566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 240167af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 24029566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 24039566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 24043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2405faa55883SToby Isaac } 2406faa55883SToby Isaac 2407d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2408d71ae5a4SJacob Faibussowitsch { 24096718818eSStefano Zampini Mat_MatTransMultDense *abt; 2410faa55883SToby Isaac 2411faa55883SToby Isaac PetscFunctionBegin; 24126718818eSStefano Zampini MatCheckProduct(C, 3); 24135f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 24146718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 2415faa55883SToby Isaac switch (abt->alg) { 2416d71ae5a4SJacob Faibussowitsch case 1: 2417d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C)); 2418d71ae5a4SJacob Faibussowitsch break; 2419d71ae5a4SJacob Faibussowitsch default: 2420d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C)); 2421d71ae5a4SJacob Faibussowitsch break; 2422faa55883SToby Isaac } 24233ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2424faa55883SToby Isaac } 2425faa55883SToby Isaac 242666976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data) 2427d71ae5a4SJacob Faibussowitsch { 24286718818eSStefano Zampini Mat_MatMultDense *ab = (Mat_MatMultDense *)data; 2429320f2790SHong Zhang 2430320f2790SHong Zhang PetscFunctionBegin; 24319566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ce)); 24329566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ae)); 24339566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Be)); 24349566063dSJacob Faibussowitsch PetscCall(PetscFree(ab)); 24353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2436320f2790SHong Zhang } 2437320f2790SHong Zhang 24385d8c7819SPierre Jolivet static PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2439d71ae5a4SJacob Faibussowitsch { 24406718818eSStefano Zampini Mat_MatMultDense *ab; 24415d8c7819SPierre Jolivet Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 2442d016bddeSToby Isaac Mat_MPIDense *b = (Mat_MPIDense *)B->data; 2443320f2790SHong Zhang 2444320f2790SHong Zhang PetscFunctionBegin; 24456718818eSStefano Zampini MatCheckProduct(C, 3); 24465f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Missing product data"); 24476718818eSStefano Zampini ab = (Mat_MatMultDense *)C->product->data; 24485d8c7819SPierre Jolivet if (ab->Ae && ab->Ce) { 24495d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 24509566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(A, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Ae)); 24519566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(B, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Be)); 24529566063dSJacob Faibussowitsch PetscCall(MatMatMultNumeric_Elemental(ab->Ae, ab->Be, ab->Ce)); 24539566063dSJacob Faibussowitsch PetscCall(MatConvert(ab->Ce, MATMPIDENSE, MAT_REUSE_MATRIX, &C)); 24545d8c7819SPierre Jolivet #else 24555d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 24565d8c7819SPierre Jolivet #endif 24575d8c7819SPierre Jolivet } else { 2458d016bddeSToby Isaac MPI_Comm comm; 24595d8c7819SPierre Jolivet const PetscScalar *read; 24605d8c7819SPierre Jolivet PetscScalar *write; 24615d8c7819SPierre Jolivet PetscInt lda; 2462d016bddeSToby Isaac const PetscInt *ranges; 2463d016bddeSToby Isaac PetscMPIInt size; 24645d8c7819SPierre Jolivet 2465d016bddeSToby Isaac if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); /* cannot be done during the symbolic phase because of possible calls to MatProductReplaceMats() */ 2466d016bddeSToby Isaac comm = PetscObjectComm((PetscObject)B); 2467d016bddeSToby Isaac PetscCallMPI(MPI_Comm_size(comm, &size)); 2468d016bddeSToby Isaac PetscCall(PetscLayoutGetRanges(B->rmap, &ranges)); 2469d016bddeSToby Isaac if (ranges[1] == ranges[size]) { 2470d016bddeSToby Isaac // optimize for the case where the B matrix is broadcast from rank 0 2471d016bddeSToby Isaac PetscInt b_lda, be_lda; 2472d016bddeSToby Isaac Mat b_local = b->A; 2473d016bddeSToby Isaac Mat b_alloc = NULL; 2474d016bddeSToby Isaac Mat be_local = ab->Be; 2475d016bddeSToby Isaac Mat be_alloc = NULL; 2476d016bddeSToby Isaac PetscMemType b_memtype, be_memtype; 2477d016bddeSToby Isaac const PetscScalar *b_array = NULL; 2478d016bddeSToby Isaac MPI_Datatype vector_type; 2479d016bddeSToby Isaac PetscScalar *be_array = NULL; 2480d016bddeSToby Isaac PetscMPIInt rank; 2481d016bddeSToby Isaac 2482d016bddeSToby Isaac PetscCallMPI(MPI_Comm_rank(comm, &rank)); 2483d016bddeSToby Isaac PetscCall(MatDenseGetLDA(be_local, &be_lda)); 2484d016bddeSToby Isaac if (be_lda != B->rmap->N) { 2485d016bddeSToby Isaac PetscCall(MatDuplicate(be_local, MAT_DO_NOT_COPY_VALUES, &be_alloc)); 2486d016bddeSToby Isaac be_local = be_alloc; 2487d016bddeSToby Isaac } 2488d016bddeSToby Isaac 2489d016bddeSToby Isaac if (rank == 0) { 2490d016bddeSToby Isaac PetscCall(MatDenseGetLDA(b_local, &b_lda)); 2491d016bddeSToby Isaac if (b_lda != B->rmap->N) { 2492d016bddeSToby Isaac PetscCall(MatDuplicate(b_local, MAT_DO_NOT_COPY_VALUES, &b_alloc)); 2493d016bddeSToby Isaac PetscCall(MatCopy(b_local, b_alloc, DIFFERENT_NONZERO_PATTERN)); 2494d016bddeSToby Isaac b_local = b_alloc; 2495d016bddeSToby Isaac } 2496d016bddeSToby Isaac } 2497b682a77bSToby Isaac vector_type = MPIU_SCALAR; 2498b682a77bSToby Isaac if (B->cmap->N > 1) { 2499b682a77bSToby Isaac PetscMPIInt mpi_N; 2500b682a77bSToby Isaac 2501b682a77bSToby Isaac PetscCall(PetscMPIIntCast(B->cmap->N, &mpi_N)); 2502b682a77bSToby Isaac PetscCallMPI(MPI_Type_contiguous(mpi_N, MPIU_SCALAR, &vector_type)); 2503d016bddeSToby Isaac PetscCallMPI(MPI_Type_commit(&vector_type)); 2504b682a77bSToby Isaac } 2505d016bddeSToby Isaac PetscCall(MatDenseGetArrayReadAndMemType(b_local, &b_array, &b_memtype)); 2506d016bddeSToby Isaac PetscCall(MatDenseGetArrayWriteAndMemType(be_local, &be_array, &be_memtype)); 2507d016bddeSToby Isaac PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, vector_type, b_memtype, b_array, be_memtype, be_array, MPI_REPLACE)); 2508d016bddeSToby Isaac PetscCall(PetscSFBcastEnd(mdn->Mvctx, vector_type, b_array, be_array, MPI_REPLACE)); 2509d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayWriteAndMemType(be_local, &be_array)); 2510d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayReadAndMemType(b_local, &b_array)); 2511d016bddeSToby Isaac if (be_local != ab->Be) PetscCall(MatCopy(be_local, ab->Be, DIFFERENT_NONZERO_PATTERN)); 2512b682a77bSToby Isaac if (B->cmap->N > 1) PetscCallMPI(MPI_Type_free(&vector_type)); 2513d016bddeSToby Isaac PetscCall(MatDestroy(&be_alloc)); 2514d016bddeSToby Isaac PetscCall(MatDestroy(&b_alloc)); 2515d016bddeSToby Isaac } else { 25165d8c7819SPierre Jolivet PetscCall(MatDenseGetLDA(B, &lda)); 25175d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayRead(B, &read)); 25185d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayWrite(ab->Be, &write)); 25195d8c7819SPierre Jolivet for (PetscInt i = 0; i < C->cmap->N; ++i) { 25205d8c7819SPierre Jolivet PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 25215d8c7819SPierre Jolivet PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 25225d8c7819SPierre Jolivet } 25235d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayWrite(ab->Be, &write)); 25245d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(B, &read)); 2525d016bddeSToby Isaac } 2526f4f49eeaSPierre Jolivet PetscCall(MatMatMultNumeric_SeqDense_SeqDense(((Mat_MPIDense *)A->data)->A, ab->Be, ((Mat_MPIDense *)C->data)->A)); 25275d8c7819SPierre Jolivet } 25283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2529320f2790SHong Zhang } 2530320f2790SHong Zhang 2531d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2532d71ae5a4SJacob Faibussowitsch { 25335d8c7819SPierre Jolivet Mat_Product *product = C->product; 25345d8c7819SPierre Jolivet PetscInt alg; 2535320f2790SHong Zhang Mat_MatMultDense *ab; 25365d8c7819SPierre Jolivet PetscBool flg; 2537320f2790SHong Zhang 2538320f2790SHong Zhang PetscFunctionBegin; 25396718818eSStefano Zampini MatCheckProduct(C, 4); 25405f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 25414222ddf1SHong Zhang /* check local size of A and B */ 25425d8c7819SPierre Jolivet PetscCheck(A->cmap->rstart == B->rmap->rstart && A->cmap->rend == B->rmap->rend, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ", %" PetscInt_FMT ")", 25435d8c7819SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2544320f2790SHong Zhang 25455d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "petsc", &flg)); 25465d8c7819SPierre Jolivet alg = flg ? 0 : 1; 25474222ddf1SHong Zhang 25484222ddf1SHong Zhang /* setup C */ 25495d8c7819SPierre Jolivet PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, A->rmap->N, B->cmap->N)); 25505d8c7819SPierre Jolivet PetscCall(MatSetType(C, MATMPIDENSE)); 25519566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2552320f2790SHong Zhang 2553320f2790SHong Zhang /* create data structure for reuse Cdense */ 25549566063dSJacob Faibussowitsch PetscCall(PetscNew(&ab)); 25555d8c7819SPierre Jolivet 25565d8c7819SPierre Jolivet switch (alg) { 25575d8c7819SPierre Jolivet case 1: /* alg: "elemental" */ 25585d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 25595d8c7819SPierre Jolivet /* create elemental matrices Ae and Be */ 25605d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &ab->Ae)); 25615d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Ae, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 25625d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Ae, MATELEMENTAL)); 25635d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Ae)); 25645d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Ae, MAT_ROW_ORIENTED, PETSC_FALSE)); 25655d8c7819SPierre Jolivet 25665d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &ab->Be)); 25675d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Be, PETSC_DECIDE, PETSC_DECIDE, B->rmap->N, B->cmap->N)); 25685d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Be, MATELEMENTAL)); 25695d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Be)); 25705d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Be, MAT_ROW_ORIENTED, PETSC_FALSE)); 25715d8c7819SPierre Jolivet 25725d8c7819SPierre Jolivet /* compute symbolic Ce = Ae*Be */ 25735d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)C), &ab->Ce)); 25745d8c7819SPierre Jolivet PetscCall(MatMatMultSymbolic_Elemental(ab->Ae, ab->Be, fill, ab->Ce)); 25755d8c7819SPierre Jolivet #else 25765d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 25775d8c7819SPierre Jolivet #endif 25785d8c7819SPierre Jolivet break; 25795d8c7819SPierre Jolivet default: /* alg: "petsc" */ 25805d8c7819SPierre Jolivet ab->Ae = NULL; 25815d8c7819SPierre Jolivet PetscCall(MatCreateSeqDense(PETSC_COMM_SELF, A->cmap->N, B->cmap->N, NULL, &ab->Be)); 25825d8c7819SPierre Jolivet ab->Ce = NULL; 25835d8c7819SPierre Jolivet break; 25845d8c7819SPierre Jolivet } 25856718818eSStefano Zampini 25866718818eSStefano Zampini C->product->data = ab; 25876718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense; 25884222ddf1SHong Zhang C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense; 25893ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2590320f2790SHong Zhang } 25912ef1f0ffSBarry Smith 2592d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C) 2593d71ae5a4SJacob Faibussowitsch { 25945d8c7819SPierre Jolivet Mat_Product *product = C->product; 25955d8c7819SPierre Jolivet const char *algTypes[2] = {"petsc", "elemental"}; 25965d8c7819SPierre Jolivet PetscInt alg, nalg = PetscDefined(HAVE_ELEMENTAL) ? 2 : 1; 25975d8c7819SPierre Jolivet PetscBool flg = PETSC_FALSE; 25985d8c7819SPierre Jolivet 25994d86920dSPierre Jolivet PetscFunctionBegin; 26005d8c7819SPierre Jolivet /* Set default algorithm */ 2601f0b74427SPierre Jolivet alg = 0; /* default is PETSc */ 26025d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "default", &flg)); 2603835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26045d8c7819SPierre Jolivet 26055d8c7819SPierre Jolivet /* Get runtime option */ 26065d8c7819SPierre Jolivet PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_AB", "Mat"); 26075d8c7819SPierre Jolivet PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_AB", algTypes, nalg, algTypes[alg], &alg, &flg)); 26085d8c7819SPierre Jolivet PetscOptionsEnd(); 2609835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26105d8c7819SPierre Jolivet 26114222ddf1SHong Zhang C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense; 26124222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_AB; 26133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2614320f2790SHong Zhang } 261586aefd0dSHong Zhang 2616d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C) 2617d71ae5a4SJacob Faibussowitsch { 26184222ddf1SHong Zhang Mat_Product *product = C->product; 26194222ddf1SHong Zhang Mat A = product->A, B = product->B; 26204222ddf1SHong Zhang 26214222ddf1SHong Zhang PetscFunctionBegin; 262207e90273SPierre Jolivet PetscCheck(A->rmap->rstart == B->rmap->rstart && A->rmap->rend == B->rmap->rend, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")", 262307e90273SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 26246718818eSStefano Zampini C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense; 26256718818eSStefano Zampini C->ops->productsymbolic = MatProductSymbolic_AtB; 26263ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26274222ddf1SHong Zhang } 26284222ddf1SHong Zhang 2629d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C) 2630d71ae5a4SJacob Faibussowitsch { 26314222ddf1SHong Zhang Mat_Product *product = C->product; 26324222ddf1SHong Zhang const char *algTypes[2] = {"allgatherv", "cyclic"}; 26334222ddf1SHong Zhang PetscInt alg, nalg = 2; 26344222ddf1SHong Zhang PetscBool flg = PETSC_FALSE; 26354222ddf1SHong Zhang 26364222ddf1SHong Zhang PetscFunctionBegin; 26374222ddf1SHong Zhang /* Set default algorithm */ 26384222ddf1SHong Zhang alg = 0; /* default is allgatherv */ 26399566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "default", &flg)); 2640835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26414222ddf1SHong Zhang 26424222ddf1SHong Zhang /* Get runtime option */ 26434222ddf1SHong Zhang if (product->api_user) { 2644d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatMatTransposeMult", "Mat"); 26459566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via", "Algorithmic approach", "MatMatTransposeMult", algTypes, nalg, algTypes[alg], &alg, &flg)); 2646d0609cedSBarry Smith PetscOptionsEnd(); 26474222ddf1SHong Zhang } else { 2648d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_ABt", "Mat"); 26499566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_ABt", algTypes, nalg, algTypes[alg], &alg, &flg)); 2650d0609cedSBarry Smith PetscOptionsEnd(); 26514222ddf1SHong Zhang } 2652835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26534222ddf1SHong Zhang 26544222ddf1SHong Zhang C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense; 26554222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_ABt; 26563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26574222ddf1SHong Zhang } 26584222ddf1SHong Zhang 26595d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C) 2660d71ae5a4SJacob Faibussowitsch { 26614222ddf1SHong Zhang Mat_Product *product = C->product; 26624222ddf1SHong Zhang 26634222ddf1SHong Zhang PetscFunctionBegin; 26644222ddf1SHong Zhang switch (product->type) { 2665d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AB: 2666d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AB(C)); 2667d71ae5a4SJacob Faibussowitsch break; 2668d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AtB: 2669d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AtB(C)); 2670d71ae5a4SJacob Faibussowitsch break; 2671d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABt: 2672d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_ABt(C)); 2673d71ae5a4SJacob Faibussowitsch break; 2674d71ae5a4SJacob Faibussowitsch default: 2675d71ae5a4SJacob Faibussowitsch break; 26764222ddf1SHong Zhang } 26773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26784222ddf1SHong Zhang } 2679