1be1d678aSKris Buschelman 2ed3cc1f0SBarry Smith /* 3ed3cc1f0SBarry Smith Basic functions for basic parallel dense matrices. 4ed3cc1f0SBarry Smith */ 5ed3cc1f0SBarry Smith 6c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h> /*I "petscmat.h" I*/ 78949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h> 8baa3c1c6SHong Zhang #include <petscblaslapack.h> 98965ea79SLois Curfman McInnes 10ab92ecdeSBarry Smith /*@ 11ab92ecdeSBarry Smith 12ab92ecdeSBarry Smith MatDenseGetLocalMatrix - For a MATMPIDENSE or MATSEQDENSE matrix returns the sequential 13ab92ecdeSBarry Smith matrix that represents the operator. For sequential matrices it returns itself. 14ab92ecdeSBarry Smith 15ab92ecdeSBarry Smith Input Parameter: 16ab92ecdeSBarry Smith . A - the Seq or MPI dense matrix 17ab92ecdeSBarry Smith 18ab92ecdeSBarry Smith Output Parameter: 19ab92ecdeSBarry Smith . B - the inner matrix 20ab92ecdeSBarry Smith 218e6c10adSSatish Balay Level: intermediate 228e6c10adSSatish Balay 23ab92ecdeSBarry Smith @*/ 249371c9d4SSatish Balay PetscErrorCode MatDenseGetLocalMatrix(Mat A, Mat *B) { 25ab92ecdeSBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 26ace3abfcSBarry Smith PetscBool flg; 27ab92ecdeSBarry Smith 28ab92ecdeSBarry Smith PetscFunctionBegin; 29d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 30d5ea218eSStefano Zampini PetscValidPointer(B, 2); 319566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATMPIDENSE, &flg)); 322205254eSKarl Rupp if (flg) *B = mat->A; 33f140bc17SStefano Zampini else { 349566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATSEQDENSE, &flg)); 3528b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for matrix type %s", ((PetscObject)A)->type_name); 36f140bc17SStefano Zampini *B = A; 37f140bc17SStefano Zampini } 38ab92ecdeSBarry Smith PetscFunctionReturn(0); 39ab92ecdeSBarry Smith } 40ab92ecdeSBarry Smith 419371c9d4SSatish Balay PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s) { 42a76f77c3SStefano Zampini Mat_MPIDense *Amat = (Mat_MPIDense *)A->data; 43a76f77c3SStefano Zampini Mat_MPIDense *Bmat = (Mat_MPIDense *)B->data; 44a76f77c3SStefano Zampini 45a76f77c3SStefano Zampini PetscFunctionBegin; 469566063dSJacob Faibussowitsch PetscCall(MatCopy(Amat->A, Bmat->A, s)); 47a76f77c3SStefano Zampini PetscFunctionReturn(0); 48a76f77c3SStefano Zampini } 49a76f77c3SStefano Zampini 509371c9d4SSatish Balay PetscErrorCode MatShift_MPIDense(Mat A, PetscScalar alpha) { 512f605a99SJose E. Roman Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 522f605a99SJose E. Roman PetscInt j, lda, rstart = A->rmap->rstart, rend = A->rmap->rend, rend2; 532f605a99SJose E. Roman PetscScalar *v; 542f605a99SJose E. Roman 552f605a99SJose E. Roman PetscFunctionBegin; 562f605a99SJose E. Roman PetscCall(MatDenseGetArray(mat->A, &v)); 572f605a99SJose E. Roman PetscCall(MatDenseGetLDA(mat->A, &lda)); 582f605a99SJose E. Roman rend2 = PetscMin(rend, A->cmap->N); 592f605a99SJose E. Roman if (rend2 > rstart) { 602f605a99SJose E. Roman for (j = rstart; j < rend2; j++) v[j - rstart + j * lda] += alpha; 612f605a99SJose E. Roman PetscCall(PetscLogFlops(rend2 - rstart)); 622f605a99SJose E. Roman } 632f605a99SJose E. Roman PetscCall(MatDenseRestoreArray(mat->A, &v)); 642f605a99SJose E. Roman PetscFunctionReturn(0); 652f605a99SJose E. Roman } 662f605a99SJose E. Roman 679371c9d4SSatish Balay PetscErrorCode MatGetRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) { 68ba8c8a56SBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 69d0f46423SBarry Smith PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 70ba8c8a56SBarry Smith 71ba8c8a56SBarry Smith PetscFunctionBegin; 72aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 73ba8c8a56SBarry Smith lrow = row - rstart; 749566063dSJacob Faibussowitsch PetscCall(MatGetRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 75ba8c8a56SBarry Smith PetscFunctionReturn(0); 76ba8c8a56SBarry Smith } 77ba8c8a56SBarry Smith 789371c9d4SSatish Balay PetscErrorCode MatRestoreRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) { 79637a0070SStefano Zampini Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 80637a0070SStefano Zampini PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 81ba8c8a56SBarry Smith 82ba8c8a56SBarry Smith PetscFunctionBegin; 83aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 84637a0070SStefano Zampini lrow = row - rstart; 859566063dSJacob Faibussowitsch PetscCall(MatRestoreRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 86ba8c8a56SBarry Smith PetscFunctionReturn(0); 87ba8c8a56SBarry Smith } 88ba8c8a56SBarry Smith 899371c9d4SSatish Balay PetscErrorCode MatGetDiagonalBlock_MPIDense(Mat A, Mat *a) { 900de54da6SSatish Balay Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 91d0f46423SBarry Smith PetscInt m = A->rmap->n, rstart = A->rmap->rstart; 9287828ca2SBarry Smith PetscScalar *array; 930de54da6SSatish Balay MPI_Comm comm; 944b6ae80fSStefano Zampini PetscBool flg; 9511bd1e4dSLisandro Dalcin Mat B; 960de54da6SSatish Balay 970de54da6SSatish Balay PetscFunctionBegin; 989566063dSJacob Faibussowitsch PetscCall(MatHasCongruentLayouts(A, &flg)); 9928b400f6SJacob Faibussowitsch PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only square matrices supported."); 1009566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery((PetscObject)A, "DiagonalBlock", (PetscObject *)&B)); 101616b8fbbSStefano Zampini if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */ 1024b6ae80fSStefano Zampini 1039566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSECUDA, &flg)); 10428b400f6SJacob Faibussowitsch PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSECUDA); 1059566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)(mdn->A), &comm)); 1069566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &B)); 1079566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, m, m, m, m)); 1089566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)mdn->A)->type_name)); 1099566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, (const PetscScalar **)&array)); 1109566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(B, array + m * rstart)); 1119566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, (const PetscScalar **)&array)); 1129566063dSJacob Faibussowitsch PetscCall(PetscObjectCompose((PetscObject)A, "DiagonalBlock", (PetscObject)B)); 11311bd1e4dSLisandro Dalcin *a = B; 1149566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 1152205254eSKarl Rupp } else *a = B; 1160de54da6SSatish Balay PetscFunctionReturn(0); 1170de54da6SSatish Balay } 1180de54da6SSatish Balay 1199371c9d4SSatish Balay PetscErrorCode MatSetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv) { 12039b7565bSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)mat->data; 121d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 122ace3abfcSBarry Smith PetscBool roworiented = A->roworiented; 1238965ea79SLois Curfman McInnes 1243a40ed3dSBarry Smith PetscFunctionBegin; 1258965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 1265ef9f2a5SBarry Smith if (idxm[i] < 0) continue; 12708401ef6SPierre Jolivet PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 1288965ea79SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 1298965ea79SLois Curfman McInnes row = idxm[i] - rstart; 13039b7565bSBarry Smith if (roworiented) { 1319566063dSJacob Faibussowitsch PetscCall(MatSetValues(A->A, 1, &row, n, idxn, v + i * n, addv)); 1323a40ed3dSBarry Smith } else { 1338965ea79SLois Curfman McInnes for (j = 0; j < n; j++) { 1345ef9f2a5SBarry Smith if (idxn[j] < 0) continue; 13508401ef6SPierre Jolivet PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1369566063dSJacob Faibussowitsch PetscCall(MatSetValues(A->A, 1, &row, 1, &idxn[j], v + i + j * m, addv)); 13739b7565bSBarry Smith } 1388965ea79SLois Curfman McInnes } 1392205254eSKarl Rupp } else if (!A->donotstash) { 1405080c13bSMatthew G Knepley mat->assembled = PETSC_FALSE; 14139b7565bSBarry Smith if (roworiented) { 1429566063dSJacob Faibussowitsch PetscCall(MatStashValuesRow_Private(&mat->stash, idxm[i], n, idxn, v + i * n, PETSC_FALSE)); 143d36fbae8SSatish Balay } else { 1449566063dSJacob Faibussowitsch PetscCall(MatStashValuesCol_Private(&mat->stash, idxm[i], n, idxn, v + i, m, PETSC_FALSE)); 14539b7565bSBarry Smith } 146b49de8d1SLois Curfman McInnes } 147b49de8d1SLois Curfman McInnes } 1483a40ed3dSBarry Smith PetscFunctionReturn(0); 149b49de8d1SLois Curfman McInnes } 150b49de8d1SLois Curfman McInnes 1519371c9d4SSatish Balay PetscErrorCode MatGetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], PetscScalar v[]) { 152b49de8d1SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 153d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 154b49de8d1SLois Curfman McInnes 1553a40ed3dSBarry Smith PetscFunctionBegin; 156b49de8d1SLois Curfman McInnes for (i = 0; i < m; i++) { 15754c59aa7SJacob Faibussowitsch if (idxm[i] < 0) continue; /* negative row */ 15854c59aa7SJacob Faibussowitsch PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 159b49de8d1SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 160b49de8d1SLois Curfman McInnes row = idxm[i] - rstart; 161b49de8d1SLois Curfman McInnes for (j = 0; j < n; j++) { 16254c59aa7SJacob Faibussowitsch if (idxn[j] < 0) continue; /* negative column */ 16354c59aa7SJacob Faibussowitsch PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1649566063dSJacob Faibussowitsch PetscCall(MatGetValues(mdn->A, 1, &row, 1, &idxn[j], v + i * n + j)); 165b49de8d1SLois Curfman McInnes } 166e7e72b3dSBarry Smith } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Only local values currently supported"); 1678965ea79SLois Curfman McInnes } 1683a40ed3dSBarry Smith PetscFunctionReturn(0); 1698965ea79SLois Curfman McInnes } 1708965ea79SLois Curfman McInnes 1719371c9d4SSatish Balay static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A, PetscInt *lda) { 17249a6ff4bSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 17349a6ff4bSBarry Smith 17449a6ff4bSBarry Smith PetscFunctionBegin; 1759566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, lda)); 17649a6ff4bSBarry Smith PetscFunctionReturn(0); 17749a6ff4bSBarry Smith } 17849a6ff4bSBarry Smith 1799371c9d4SSatish Balay static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A, PetscInt lda) { 180ad16ce7aSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 18117359960SJose E. Roman PetscBool iscuda; 182ad16ce7aSStefano Zampini 183ad16ce7aSStefano Zampini PetscFunctionBegin; 18417359960SJose E. Roman if (!a->A) { 18528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1869566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 1879566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 1889566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 1899566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->A)); 1909566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N)); 1919566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda)); 1929566063dSJacob Faibussowitsch PetscCall(MatSetType(a->A, iscuda ? MATSEQDENSECUDA : MATSEQDENSE)); 19317359960SJose E. Roman } 1949566063dSJacob Faibussowitsch PetscCall(MatDenseSetLDA(a->A, lda)); 195ad16ce7aSStefano Zampini PetscFunctionReturn(0); 196ad16ce7aSStefano Zampini } 197ad16ce7aSStefano Zampini 1989371c9d4SSatish Balay static PetscErrorCode MatDenseGetArray_MPIDense(Mat A, PetscScalar **array) { 199ff14e315SSatish Balay Mat_MPIDense *a = (Mat_MPIDense *)A->data; 200ff14e315SSatish Balay 2013a40ed3dSBarry Smith PetscFunctionBegin; 20228b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2039566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, array)); 2043a40ed3dSBarry Smith PetscFunctionReturn(0); 205ff14e315SSatish Balay } 206ff14e315SSatish Balay 2079371c9d4SSatish Balay static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A, const PetscScalar **array) { 2088572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2098572280aSBarry Smith 2108572280aSBarry Smith PetscFunctionBegin; 21128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2129566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, array)); 2138572280aSBarry Smith PetscFunctionReturn(0); 2148572280aSBarry Smith } 2158572280aSBarry Smith 2169371c9d4SSatish Balay static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A, PetscScalar **array) { 2176947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2186947451fSStefano Zampini 2196947451fSStefano Zampini PetscFunctionBegin; 22028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2219566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, array)); 2226947451fSStefano Zampini PetscFunctionReturn(0); 2236947451fSStefano Zampini } 2246947451fSStefano Zampini 2259371c9d4SSatish Balay static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A, const PetscScalar *array) { 226d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 227d3042a70SBarry Smith 228d3042a70SBarry Smith PetscFunctionBegin; 22928b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 23028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2319566063dSJacob Faibussowitsch PetscCall(MatDensePlaceArray(a->A, array)); 232d3042a70SBarry Smith PetscFunctionReturn(0); 233d3042a70SBarry Smith } 234d3042a70SBarry Smith 2359371c9d4SSatish Balay static PetscErrorCode MatDenseResetArray_MPIDense(Mat A) { 236d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 237d3042a70SBarry Smith 238d3042a70SBarry Smith PetscFunctionBegin; 23928b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 24028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2419566063dSJacob Faibussowitsch PetscCall(MatDenseResetArray(a->A)); 242d3042a70SBarry Smith PetscFunctionReturn(0); 243d3042a70SBarry Smith } 244d3042a70SBarry Smith 2459371c9d4SSatish Balay static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A, const PetscScalar *array) { 246d5ea218eSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 247d5ea218eSStefano Zampini 248d5ea218eSStefano Zampini PetscFunctionBegin; 24928b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 25028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2519566063dSJacob Faibussowitsch PetscCall(MatDenseReplaceArray(a->A, array)); 252d5ea218eSStefano Zampini PetscFunctionReturn(0); 253d5ea218eSStefano Zampini } 254d5ea218eSStefano Zampini 2559371c9d4SSatish Balay static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A, IS isrow, IS iscol, MatReuse scall, Mat *B) { 256ca3fa75bSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data, *newmatd; 257637a0070SStefano Zampini PetscInt lda, i, j, rstart, rend, nrows, ncols, Ncols, nlrows, nlcols; 2585d0c19d7SBarry Smith const PetscInt *irow, *icol; 259637a0070SStefano Zampini const PetscScalar *v; 260637a0070SStefano Zampini PetscScalar *bv; 261ca3fa75bSLois Curfman McInnes Mat newmat; 2624aa3045dSJed Brown IS iscol_local; 26342a884f0SBarry Smith MPI_Comm comm_is, comm_mat; 264ca3fa75bSLois Curfman McInnes 265ca3fa75bSLois Curfman McInnes PetscFunctionBegin; 2669566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm_mat)); 2679566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)iscol, &comm_is)); 26808401ef6SPierre Jolivet PetscCheck(comm_mat == comm_is, PETSC_COMM_SELF, PETSC_ERR_ARG_NOTSAMECOMM, "IS communicator must match matrix communicator"); 26942a884f0SBarry Smith 2709566063dSJacob Faibussowitsch PetscCall(ISAllGather(iscol, &iscol_local)); 2719566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &irow)); 2729566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol_local, &icol)); 2739566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(isrow, &nrows)); 2749566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(iscol, &ncols)); 2759566063dSJacob Faibussowitsch PetscCall(ISGetSize(iscol, &Ncols)); /* global number of columns, size of iscol_local */ 276ca3fa75bSLois Curfman McInnes 277ca3fa75bSLois Curfman McInnes /* No parallel redistribution currently supported! Should really check each index set 2787eba5e9cSLois Curfman McInnes to comfirm that it is OK. ... Currently supports only submatrix same partitioning as 2797eba5e9cSLois Curfman McInnes original matrix! */ 280ca3fa75bSLois Curfman McInnes 2819566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &nlrows, &nlcols)); 2829566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRange(A, &rstart, &rend)); 283ca3fa75bSLois Curfman McInnes 284ca3fa75bSLois Curfman McInnes /* Check submatrix call */ 285ca3fa75bSLois Curfman McInnes if (scall == MAT_REUSE_MATRIX) { 286e32f2f54SBarry Smith /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */ 2877eba5e9cSLois Curfman McInnes /* Really need to test rows and column sizes! */ 288ca3fa75bSLois Curfman McInnes newmat = *B; 289ca3fa75bSLois Curfman McInnes } else { 290ca3fa75bSLois Curfman McInnes /* Create and fill new matrix */ 2919566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &newmat)); 2929566063dSJacob Faibussowitsch PetscCall(MatSetSizes(newmat, nrows, ncols, PETSC_DECIDE, Ncols)); 2939566063dSJacob Faibussowitsch PetscCall(MatSetType(newmat, ((PetscObject)A)->type_name)); 2949566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(newmat, NULL)); 295ca3fa75bSLois Curfman McInnes } 296ca3fa75bSLois Curfman McInnes 297ca3fa75bSLois Curfman McInnes /* Now extract the data pointers and do the copy, column at a time */ 298ca3fa75bSLois Curfman McInnes newmatd = (Mat_MPIDense *)newmat->data; 2999566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(newmatd->A, &bv)); 3009566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mat->A, &v)); 3019566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mat->A, &lda)); 3024aa3045dSJed Brown for (i = 0; i < Ncols; i++) { 303637a0070SStefano Zampini const PetscScalar *av = v + lda * icol[i]; 304ad540459SPierre Jolivet for (j = 0; j < nrows; j++) *bv++ = av[irow[j] - rstart]; 305ca3fa75bSLois Curfman McInnes } 3069566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mat->A, &v)); 3079566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(newmatd->A, &bv)); 308ca3fa75bSLois Curfman McInnes 309ca3fa75bSLois Curfman McInnes /* Assemble the matrices so that the correct flags are set */ 3109566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(newmat, MAT_FINAL_ASSEMBLY)); 3119566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(newmat, MAT_FINAL_ASSEMBLY)); 312ca3fa75bSLois Curfman McInnes 313ca3fa75bSLois Curfman McInnes /* Free work space */ 3149566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &irow)); 3159566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol_local, &icol)); 3169566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iscol_local)); 317ca3fa75bSLois Curfman McInnes *B = newmat; 318ca3fa75bSLois Curfman McInnes PetscFunctionReturn(0); 319ca3fa75bSLois Curfman McInnes } 320ca3fa75bSLois Curfman McInnes 3219371c9d4SSatish Balay PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A, PetscScalar **array) { 32273a71a0fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 32373a71a0fSBarry Smith 3243a40ed3dSBarry Smith PetscFunctionBegin; 3259566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, array)); 3263a40ed3dSBarry Smith PetscFunctionReturn(0); 327ff14e315SSatish Balay } 328ff14e315SSatish Balay 3299371c9d4SSatish Balay PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A, const PetscScalar **array) { 3308572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3318572280aSBarry Smith 3328572280aSBarry Smith PetscFunctionBegin; 3339566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, array)); 3348572280aSBarry Smith PetscFunctionReturn(0); 3358572280aSBarry Smith } 3368572280aSBarry Smith 3379371c9d4SSatish Balay PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A, PetscScalar **array) { 3386947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3396947451fSStefano Zampini 3406947451fSStefano Zampini PetscFunctionBegin; 3419566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, array)); 3426947451fSStefano Zampini PetscFunctionReturn(0); 3436947451fSStefano Zampini } 3446947451fSStefano Zampini 3459371c9d4SSatish Balay PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat, MatAssemblyType mode) { 34639ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 34713f74950SBarry Smith PetscInt nstash, reallocs; 3488965ea79SLois Curfman McInnes 3493a40ed3dSBarry Smith PetscFunctionBegin; 3504067683fSStefano Zampini if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(0); 3518965ea79SLois Curfman McInnes 3529566063dSJacob Faibussowitsch PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); 3539566063dSJacob Faibussowitsch PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); 3549566063dSJacob Faibussowitsch PetscCall(PetscInfo(mdn->A, "Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n", nstash, reallocs)); 3553a40ed3dSBarry Smith PetscFunctionReturn(0); 3568965ea79SLois Curfman McInnes } 3578965ea79SLois Curfman McInnes 3589371c9d4SSatish Balay PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat, MatAssemblyType mode) { 35939ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 36013f74950SBarry Smith PetscInt i, *row, *col, flg, j, rstart, ncols; 36113f74950SBarry Smith PetscMPIInt n; 36287828ca2SBarry Smith PetscScalar *val; 3638965ea79SLois Curfman McInnes 3643a40ed3dSBarry Smith PetscFunctionBegin; 365910cf402Sprj- if (!mdn->donotstash && !mat->nooffprocentries) { 3668965ea79SLois Curfman McInnes /* wait on receives */ 3677ef1d9bdSSatish Balay while (1) { 3689566063dSJacob Faibussowitsch PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); 3697ef1d9bdSSatish Balay if (!flg) break; 3708965ea79SLois Curfman McInnes 3717ef1d9bdSSatish Balay for (i = 0; i < n;) { 3727ef1d9bdSSatish Balay /* Now identify the consecutive vals belonging to the same row */ 3732205254eSKarl Rupp for (j = i, rstart = row[j]; j < n; j++) { 3742205254eSKarl Rupp if (row[j] != rstart) break; 3752205254eSKarl Rupp } 3767ef1d9bdSSatish Balay if (j < n) ncols = j - i; 3777ef1d9bdSSatish Balay else ncols = n - i; 3787ef1d9bdSSatish Balay /* Now assemble all these values with a single function call */ 3799566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(mat, 1, row + i, ncols, col + i, val + i, mat->insertmode)); 3807ef1d9bdSSatish Balay i = j; 3818965ea79SLois Curfman McInnes } 3827ef1d9bdSSatish Balay } 3839566063dSJacob Faibussowitsch PetscCall(MatStashScatterEnd_Private(&mat->stash)); 384910cf402Sprj- } 3858965ea79SLois Curfman McInnes 3869566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mdn->A, mode)); 3879566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mdn->A, mode)); 3883a40ed3dSBarry Smith PetscFunctionReturn(0); 3898965ea79SLois Curfman McInnes } 3908965ea79SLois Curfman McInnes 3919371c9d4SSatish Balay PetscErrorCode MatZeroEntries_MPIDense(Mat A) { 39239ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 3933a40ed3dSBarry Smith 3943a40ed3dSBarry Smith PetscFunctionBegin; 3959566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(l->A)); 3963a40ed3dSBarry Smith PetscFunctionReturn(0); 3978965ea79SLois Curfman McInnes } 3988965ea79SLois Curfman McInnes 3999371c9d4SSatish Balay PetscErrorCode MatZeroRows_MPIDense(Mat A, PetscInt n, const PetscInt rows[], PetscScalar diag, Vec x, Vec b) { 40039ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 401637a0070SStefano Zampini PetscInt i, len, *lrows; 402637a0070SStefano Zampini 403637a0070SStefano Zampini PetscFunctionBegin; 404637a0070SStefano Zampini /* get locally owned rows */ 4059566063dSJacob Faibussowitsch PetscCall(PetscLayoutMapLocal(A->rmap, n, rows, &len, &lrows, NULL)); 406637a0070SStefano Zampini /* fix right hand side if needed */ 407637a0070SStefano Zampini if (x && b) { 40897b48c8fSBarry Smith const PetscScalar *xx; 40997b48c8fSBarry Smith PetscScalar *bb; 4108965ea79SLois Curfman McInnes 4119566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(x, &xx)); 4129566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(b, &bb)); 413637a0070SStefano Zampini for (i = 0; i < len; ++i) bb[lrows[i]] = diag * xx[lrows[i]]; 4149566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(x, &xx)); 4159566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(b, &bb)); 41697b48c8fSBarry Smith } 4179566063dSJacob Faibussowitsch PetscCall(MatZeroRows(l->A, len, lrows, 0.0, NULL, NULL)); 418e2eb51b1SBarry Smith if (diag != 0.0) { 419637a0070SStefano Zampini Vec d; 420b9679d65SBarry Smith 4219566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A, NULL, &d)); 4229566063dSJacob Faibussowitsch PetscCall(VecSet(d, diag)); 4239566063dSJacob Faibussowitsch PetscCall(MatDiagonalSet(A, d, INSERT_VALUES)); 4249566063dSJacob Faibussowitsch PetscCall(VecDestroy(&d)); 425b9679d65SBarry Smith } 4269566063dSJacob Faibussowitsch PetscCall(PetscFree(lrows)); 4273a40ed3dSBarry Smith PetscFunctionReturn(0); 4288965ea79SLois Curfman McInnes } 4298965ea79SLois Curfman McInnes 430cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat, Vec, Vec); 431cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat, Vec, Vec, Vec); 432cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat, Vec, Vec); 433cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat, Vec, Vec, Vec); 434cc2e6a90SBarry Smith 4359371c9d4SSatish Balay PetscErrorCode MatMult_MPIDense(Mat mat, Vec xx, Vec yy) { 43639ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 437637a0070SStefano Zampini const PetscScalar *ax; 438637a0070SStefano Zampini PetscScalar *ay; 439d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 440c456f294SBarry Smith 4413a40ed3dSBarry Smith PetscFunctionBegin; 4426f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 4439566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 4449566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 4459566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 4469566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 4479566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 4489566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 4499566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->mult)(mdn->A, mdn->lvec, yy)); 4503a40ed3dSBarry Smith PetscFunctionReturn(0); 4518965ea79SLois Curfman McInnes } 4528965ea79SLois Curfman McInnes 4539371c9d4SSatish Balay PetscErrorCode MatMultAdd_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz) { 45439ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 455637a0070SStefano Zampini const PetscScalar *ax; 456637a0070SStefano Zampini PetscScalar *ay; 457d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 458c456f294SBarry Smith 4593a40ed3dSBarry Smith PetscFunctionBegin; 4606f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 4619566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 4629566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 4639566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 4649566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 4659566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 4669566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 4679566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->multadd)(mdn->A, mdn->lvec, yy, zz)); 4683a40ed3dSBarry Smith PetscFunctionReturn(0); 4698965ea79SLois Curfman McInnes } 4708965ea79SLois Curfman McInnes 4719371c9d4SSatish Balay PetscErrorCode MatMultTranspose_MPIDense(Mat A, Vec xx, Vec yy) { 472096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 473637a0070SStefano Zampini const PetscScalar *ax; 474637a0070SStefano Zampini PetscScalar *ay; 475d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 476096963f5SLois Curfman McInnes 4773a40ed3dSBarry Smith PetscFunctionBegin; 4786f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 4799566063dSJacob Faibussowitsch PetscCall(VecSet(yy, 0.0)); 4809566063dSJacob Faibussowitsch PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 4819566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 4829566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 4839566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 4849566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 4859566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 4869566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 4873a40ed3dSBarry Smith PetscFunctionReturn(0); 488096963f5SLois Curfman McInnes } 489096963f5SLois Curfman McInnes 4909371c9d4SSatish Balay PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) { 491096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 492637a0070SStefano Zampini const PetscScalar *ax; 493637a0070SStefano Zampini PetscScalar *ay; 494d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 495096963f5SLois Curfman McInnes 4963a40ed3dSBarry Smith PetscFunctionBegin; 4976f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 4989566063dSJacob Faibussowitsch PetscCall(VecCopy(yy, zz)); 4999566063dSJacob Faibussowitsch PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 5009566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5019566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 5029566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5039566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5049566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5059566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 5063a40ed3dSBarry Smith PetscFunctionReturn(0); 507096963f5SLois Curfman McInnes } 508096963f5SLois Curfman McInnes 5099371c9d4SSatish Balay PetscErrorCode MatGetDiagonal_MPIDense(Mat A, Vec v) { 51039ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 511637a0070SStefano Zampini PetscInt lda, len, i, n, m = A->rmap->n, radd; 51287828ca2SBarry Smith PetscScalar *x, zero = 0.0; 513637a0070SStefano Zampini const PetscScalar *av; 514ed3cc1f0SBarry Smith 5153a40ed3dSBarry Smith PetscFunctionBegin; 5169566063dSJacob Faibussowitsch PetscCall(VecSet(v, zero)); 5179566063dSJacob Faibussowitsch PetscCall(VecGetArray(v, &x)); 5189566063dSJacob Faibussowitsch PetscCall(VecGetSize(v, &n)); 51908401ef6SPierre Jolivet PetscCheck(n == A->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming mat and vec"); 520d0f46423SBarry Smith len = PetscMin(a->A->rmap->n, a->A->cmap->n); 521d0f46423SBarry Smith radd = A->rmap->rstart * m; 5229566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 5239566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 524ad540459SPierre Jolivet for (i = 0; i < len; i++) x[i] = av[radd + i * lda + i]; 5259566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 5269566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(v, &x)); 5273a40ed3dSBarry Smith PetscFunctionReturn(0); 5288965ea79SLois Curfman McInnes } 5298965ea79SLois Curfman McInnes 5309371c9d4SSatish Balay PetscErrorCode MatDestroy_MPIDense(Mat mat) { 5313501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 532ed3cc1f0SBarry Smith 5333a40ed3dSBarry Smith PetscFunctionBegin; 534aa482453SBarry Smith #if defined(PETSC_USE_LOG) 535c0aa6a63SJacob Faibussowitsch PetscLogObjectState((PetscObject)mat, "Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT, mat->rmap->N, mat->cmap->N); 5368965ea79SLois Curfman McInnes #endif 5379566063dSJacob Faibussowitsch PetscCall(MatStashDestroy_Private(&mat->stash)); 53828b400f6SJacob Faibussowitsch PetscCheck(!mdn->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 53928b400f6SJacob Faibussowitsch PetscCheck(!mdn->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 5409566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->A)); 5419566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->lvec)); 5429566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&mdn->Mvctx)); 5439566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->cvec)); 5449566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->cmat)); 54501b82886SBarry Smith 5469566063dSJacob Faibussowitsch PetscCall(PetscFree(mat->data)); 5479566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, NULL)); 5488baccfbdSHong Zhang 5499566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", NULL)); 5509566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", NULL)); 5519566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", NULL)); 5529566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", NULL)); 5539566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", NULL)); 5549566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", NULL)); 5559566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", NULL)); 5569566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", NULL)); 5579566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", NULL)); 5589566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", NULL)); 5599566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", NULL)); 5609566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", NULL)); 5619566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", NULL)); 5628baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 5639566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", NULL)); 5648baccfbdSHong Zhang #endif 565d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 5669566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", NULL)); 567d24d4204SJose E. Roman #endif 5689566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", NULL)); 5699566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", NULL)); 5709566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", NULL)); 5716718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 5729566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", NULL)); 5739566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", NULL)); 5742e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", NULL)); 5752e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensecuda_mpidense_C", NULL)); 5762e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL)); 5772e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL)); 5782e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL)); 5792e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL)); 5802e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArray_C", NULL)); 5812e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayRead_C", NULL)); 5822e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayWrite_C", NULL)); 5832e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArray_C", NULL)); 5842e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayRead_C", NULL)); 5852e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayWrite_C", NULL)); 5862e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAPlaceArray_C", NULL)); 5872e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAResetArray_C", NULL)); 5882e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAReplaceArray_C", NULL)); 5896718818eSStefano Zampini #endif 5909566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", NULL)); 5919566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", NULL)); 5929566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", NULL)); 5939566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", NULL)); 5949566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", NULL)); 5959566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", NULL)); 5969566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", NULL)); 5979566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", NULL)); 5989566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", NULL)); 5999566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", NULL)); 600f8103e6bSStefano Zampini 601f8103e6bSStefano Zampini PetscCall(PetscObjectCompose((PetscObject)mat, "DiagonalBlock", NULL)); 6023a40ed3dSBarry Smith PetscFunctionReturn(0); 6038965ea79SLois Curfman McInnes } 60439ddd567SLois Curfman McInnes 60552c5f739Sprj- PETSC_INTERN PetscErrorCode MatView_SeqDense(Mat, PetscViewer); 60652c5f739Sprj- 6079804daf3SBarry Smith #include <petscdraw.h> 6089371c9d4SSatish Balay static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat, PetscViewer viewer) { 60939ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 610616b8fbbSStefano Zampini PetscMPIInt rank; 61119fd82e9SBarry Smith PetscViewerType vtype; 612ace3abfcSBarry Smith PetscBool iascii, isdraw; 613b0a32e0cSBarry Smith PetscViewer sviewer; 614f3ef73ceSBarry Smith PetscViewerFormat format; 6158965ea79SLois Curfman McInnes 6163a40ed3dSBarry Smith PetscFunctionBegin; 6179566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat), &rank)); 6189566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 6199566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 62032077d6dSBarry Smith if (iascii) { 6219566063dSJacob Faibussowitsch PetscCall(PetscViewerGetType(viewer, &vtype)); 6229566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 623456192e2SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 6244e220ebcSLois Curfman McInnes MatInfo info; 6259566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mat, MAT_LOCAL, &info)); 6269566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 6279371c9d4SSatish Balay PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, " [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n", rank, mat->rmap->n, (PetscInt)info.nz_used, (PetscInt)info.nz_allocated, 6289371c9d4SSatish Balay (PetscInt)info.memory)); 6299566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 6309566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 6316f08ad05SPierre Jolivet if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx, viewer)); 6323a40ed3dSBarry Smith PetscFunctionReturn(0); 633fb9695e5SSatish Balay } else if (format == PETSC_VIEWER_ASCII_INFO) { 6343a40ed3dSBarry Smith PetscFunctionReturn(0); 6358965ea79SLois Curfman McInnes } 636f1af5d2fSBarry Smith } else if (isdraw) { 637b0a32e0cSBarry Smith PetscDraw draw; 638ace3abfcSBarry Smith PetscBool isnull; 639f1af5d2fSBarry Smith 6409566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw)); 6419566063dSJacob Faibussowitsch PetscCall(PetscDrawIsNull(draw, &isnull)); 642f1af5d2fSBarry Smith if (isnull) PetscFunctionReturn(0); 643f1af5d2fSBarry Smith } 64477ed5343SBarry Smith 6457da1fb6eSBarry Smith { 6468965ea79SLois Curfman McInnes /* assemble the entire matrix onto first processor. */ 6478965ea79SLois Curfman McInnes Mat A; 648d0f46423SBarry Smith PetscInt M = mat->rmap->N, N = mat->cmap->N, m, row, i, nz; 649ba8c8a56SBarry Smith PetscInt *cols; 650ba8c8a56SBarry Smith PetscScalar *vals; 6518965ea79SLois Curfman McInnes 6529566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &A)); 653dd400576SPatrick Sanan if (rank == 0) { 6549566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, M, N, M, N)); 6553a40ed3dSBarry Smith } else { 6569566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, 0, 0, M, N)); 6578965ea79SLois Curfman McInnes } 6587adad957SLisandro Dalcin /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */ 6599566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATMPIDENSE)); 6609566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 6619566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)mat, (PetscObject)A)); 6628965ea79SLois Curfman McInnes 66339ddd567SLois Curfman McInnes /* Copy the matrix ... This isn't the most efficient means, 66439ddd567SLois Curfman McInnes but it's quick for now */ 66551022da4SBarry Smith A->insertmode = INSERT_VALUES; 6662205254eSKarl Rupp 6672205254eSKarl Rupp row = mat->rmap->rstart; 6682205254eSKarl Rupp m = mdn->A->rmap->n; 6698965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 6709566063dSJacob Faibussowitsch PetscCall(MatGetRow_MPIDense(mat, row, &nz, &cols, &vals)); 6719566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(A, 1, &row, nz, cols, vals, INSERT_VALUES)); 6729566063dSJacob Faibussowitsch PetscCall(MatRestoreRow_MPIDense(mat, row, &nz, &cols, &vals)); 67339ddd567SLois Curfman McInnes row++; 6748965ea79SLois Curfman McInnes } 6758965ea79SLois Curfman McInnes 6769566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 6779566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 6789566063dSJacob Faibussowitsch PetscCall(PetscViewerGetSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 679dd400576SPatrick Sanan if (rank == 0) { 6809566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense *)(A->data))->A, ((PetscObject)mat)->name)); 6819566063dSJacob Faibussowitsch PetscCall(MatView_SeqDense(((Mat_MPIDense *)(A->data))->A, sviewer)); 6828965ea79SLois Curfman McInnes } 6839566063dSJacob Faibussowitsch PetscCall(PetscViewerRestoreSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 6849566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 6859566063dSJacob Faibussowitsch PetscCall(MatDestroy(&A)); 6868965ea79SLois Curfman McInnes } 6873a40ed3dSBarry Smith PetscFunctionReturn(0); 6888965ea79SLois Curfman McInnes } 6898965ea79SLois Curfman McInnes 6909371c9d4SSatish Balay PetscErrorCode MatView_MPIDense(Mat mat, PetscViewer viewer) { 691ace3abfcSBarry Smith PetscBool iascii, isbinary, isdraw, issocket; 6928965ea79SLois Curfman McInnes 693433994e6SBarry Smith PetscFunctionBegin; 6949566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 6959566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 6969566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSOCKET, &issocket)); 6979566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 6980f5bd95cSBarry Smith 69932077d6dSBarry Smith if (iascii || issocket || isdraw) { 7009566063dSJacob Faibussowitsch PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat, viewer)); 7011baa6e33SBarry Smith } else if (isbinary) PetscCall(MatView_Dense_Binary(mat, viewer)); 7023a40ed3dSBarry Smith PetscFunctionReturn(0); 7038965ea79SLois Curfman McInnes } 7048965ea79SLois Curfman McInnes 7059371c9d4SSatish Balay PetscErrorCode MatGetInfo_MPIDense(Mat A, MatInfoType flag, MatInfo *info) { 7063501a2bdSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 7073501a2bdSLois Curfman McInnes Mat mdn = mat->A; 7083966268fSBarry Smith PetscLogDouble isend[5], irecv[5]; 7098965ea79SLois Curfman McInnes 7103a40ed3dSBarry Smith PetscFunctionBegin; 7114e220ebcSLois Curfman McInnes info->block_size = 1.0; 7122205254eSKarl Rupp 7139566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mdn, MAT_LOCAL, info)); 7142205254eSKarl Rupp 7159371c9d4SSatish Balay isend[0] = info->nz_used; 7169371c9d4SSatish Balay isend[1] = info->nz_allocated; 7179371c9d4SSatish Balay isend[2] = info->nz_unneeded; 7189371c9d4SSatish Balay isend[3] = info->memory; 7199371c9d4SSatish Balay isend[4] = info->mallocs; 7208965ea79SLois Curfman McInnes if (flag == MAT_LOCAL) { 7214e220ebcSLois Curfman McInnes info->nz_used = isend[0]; 7224e220ebcSLois Curfman McInnes info->nz_allocated = isend[1]; 7234e220ebcSLois Curfman McInnes info->nz_unneeded = isend[2]; 7244e220ebcSLois Curfman McInnes info->memory = isend[3]; 7254e220ebcSLois Curfman McInnes info->mallocs = isend[4]; 7268965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_MAX) { 7271c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_MAX, PetscObjectComm((PetscObject)A))); 7282205254eSKarl Rupp 7294e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 7304e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 7314e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 7324e220ebcSLois Curfman McInnes info->memory = irecv[3]; 7334e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 7348965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_SUM) { 7351c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_SUM, PetscObjectComm((PetscObject)A))); 7362205254eSKarl Rupp 7374e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 7384e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 7394e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 7404e220ebcSLois Curfman McInnes info->memory = irecv[3]; 7414e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 7428965ea79SLois Curfman McInnes } 7434e220ebcSLois Curfman McInnes info->fill_ratio_given = 0; /* no parallel LU/ILU/Cholesky */ 7444e220ebcSLois Curfman McInnes info->fill_ratio_needed = 0; 7454e220ebcSLois Curfman McInnes info->factor_mallocs = 0; 7463a40ed3dSBarry Smith PetscFunctionReturn(0); 7478965ea79SLois Curfman McInnes } 7488965ea79SLois Curfman McInnes 7499371c9d4SSatish Balay PetscErrorCode MatSetOption_MPIDense(Mat A, MatOption op, PetscBool flg) { 75039ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 7518965ea79SLois Curfman McInnes 7523a40ed3dSBarry Smith PetscFunctionBegin; 75312c028f9SKris Buschelman switch (op) { 754512a5fc5SBarry Smith case MAT_NEW_NONZERO_LOCATIONS: 75512c028f9SKris Buschelman case MAT_NEW_NONZERO_LOCATION_ERR: 75612c028f9SKris Buschelman case MAT_NEW_NONZERO_ALLOCATION_ERR: 75743674050SBarry Smith MatCheckPreallocated(A, 1); 7589566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 75912c028f9SKris Buschelman break; 76012c028f9SKris Buschelman case MAT_ROW_ORIENTED: 76143674050SBarry Smith MatCheckPreallocated(A, 1); 7624e0d8c25SBarry Smith a->roworiented = flg; 7639566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 76412c028f9SKris Buschelman break; 7658c78258cSHong Zhang case MAT_FORCE_DIAGONAL_ENTRIES: 76613fa8e87SLisandro Dalcin case MAT_KEEP_NONZERO_PATTERN: 76712c028f9SKris Buschelman case MAT_USE_HASH_TABLE: 7689371c9d4SSatish Balay case MAT_SORTED_FULL: PetscCall(PetscInfo(A, "Option %s ignored\n", MatOptions[op])); break; 7699371c9d4SSatish Balay case MAT_IGNORE_OFF_PROC_ENTRIES: a->donotstash = flg; break; 77077e54ba9SKris Buschelman case MAT_SYMMETRIC: 77177e54ba9SKris Buschelman case MAT_STRUCTURALLY_SYMMETRIC: 7729a4540c5SBarry Smith case MAT_HERMITIAN: 7739a4540c5SBarry Smith case MAT_SYMMETRY_ETERNAL: 774b94d7dedSBarry Smith case MAT_STRUCTURAL_SYMMETRY_ETERNAL: 775b94d7dedSBarry Smith case MAT_SPD: 776600fe468SBarry Smith case MAT_IGNORE_LOWER_TRIANGULAR: 7775d7aebe8SStefano Zampini case MAT_IGNORE_ZERO_ENTRIES: 778b94d7dedSBarry Smith case MAT_SPD_ETERNAL: 779b94d7dedSBarry Smith /* if the diagonal matrix is square it inherits some of the properties above */ 7809566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Option %s ignored\n", MatOptions[op])); 78177e54ba9SKris Buschelman break; 7829371c9d4SSatish Balay default: SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "unknown option %s", MatOptions[op]); 7833a40ed3dSBarry Smith } 7843a40ed3dSBarry Smith PetscFunctionReturn(0); 7858965ea79SLois Curfman McInnes } 7868965ea79SLois Curfman McInnes 7879371c9d4SSatish Balay PetscErrorCode MatDiagonalScale_MPIDense(Mat A, Vec ll, Vec rr) { 7885b2fa520SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 789637a0070SStefano Zampini const PetscScalar *l; 790637a0070SStefano Zampini PetscScalar x, *v, *vv, *r; 791637a0070SStefano Zampini PetscInt i, j, s2a, s3a, s2, s3, m = mdn->A->rmap->n, n = mdn->A->cmap->n, lda; 7925b2fa520SLois Curfman McInnes 7935b2fa520SLois Curfman McInnes PetscFunctionBegin; 7949566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(mdn->A, &vv)); 7959566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mdn->A, &lda)); 7969566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &s2, &s3)); 7975b2fa520SLois Curfman McInnes if (ll) { 7989566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(ll, &s2a)); 79908401ef6SPierre Jolivet PetscCheck(s2a == s2, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2); 8009566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(ll, &l)); 8015b2fa520SLois Curfman McInnes for (i = 0; i < m; i++) { 8025b2fa520SLois Curfman McInnes x = l[i]; 803637a0070SStefano Zampini v = vv + i; 8049371c9d4SSatish Balay for (j = 0; j < n; j++) { 8059371c9d4SSatish Balay (*v) *= x; 8069371c9d4SSatish Balay v += lda; 8079371c9d4SSatish Balay } 8085b2fa520SLois Curfman McInnes } 8099566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(ll, &l)); 8109566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 8115b2fa520SLois Curfman McInnes } 8125b2fa520SLois Curfman McInnes if (rr) { 813637a0070SStefano Zampini const PetscScalar *ar; 814637a0070SStefano Zampini 8159566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(rr, &s3a)); 81608401ef6SPierre Jolivet PetscCheck(s3a == s3, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3); 8179566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(rr, &ar)); 8186f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 8199566063dSJacob Faibussowitsch PetscCall(VecGetArray(mdn->lvec, &r)); 8209566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 8219566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 8229566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(rr, &ar)); 8235b2fa520SLois Curfman McInnes for (i = 0; i < n; i++) { 8245b2fa520SLois Curfman McInnes x = r[i]; 825637a0070SStefano Zampini v = vv + i * lda; 8262205254eSKarl Rupp for (j = 0; j < m; j++) (*v++) *= x; 8275b2fa520SLois Curfman McInnes } 8289566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(mdn->lvec, &r)); 8299566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 8305b2fa520SLois Curfman McInnes } 8319566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(mdn->A, &vv)); 8325b2fa520SLois Curfman McInnes PetscFunctionReturn(0); 8335b2fa520SLois Curfman McInnes } 8345b2fa520SLois Curfman McInnes 8359371c9d4SSatish Balay PetscErrorCode MatNorm_MPIDense(Mat A, NormType type, PetscReal *nrm) { 8363501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 83713f74950SBarry Smith PetscInt i, j; 838616b8fbbSStefano Zampini PetscMPIInt size; 839329f5518SBarry Smith PetscReal sum = 0.0; 840637a0070SStefano Zampini const PetscScalar *av, *v; 8413501a2bdSLois Curfman McInnes 8423a40ed3dSBarry Smith PetscFunctionBegin; 8439566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, &av)); 844637a0070SStefano Zampini v = av; 8459566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 846616b8fbbSStefano Zampini if (size == 1) { 8479566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, nrm)); 8483501a2bdSLois Curfman McInnes } else { 8493501a2bdSLois Curfman McInnes if (type == NORM_FROBENIUS) { 850d0f46423SBarry Smith for (i = 0; i < mdn->A->cmap->n * mdn->A->rmap->n; i++) { 8519371c9d4SSatish Balay sum += PetscRealPart(PetscConj(*v) * (*v)); 8529371c9d4SSatish Balay v++; 8533501a2bdSLois Curfman McInnes } 8541c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&sum, nrm, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 8558f1a2a5eSBarry Smith *nrm = PetscSqrtReal(*nrm); 8569566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * mdn->A->cmap->n * mdn->A->rmap->n)); 8573a40ed3dSBarry Smith } else if (type == NORM_1) { 858329f5518SBarry Smith PetscReal *tmp, *tmp2; 8599566063dSJacob Faibussowitsch PetscCall(PetscCalloc2(A->cmap->N, &tmp, A->cmap->N, &tmp2)); 860064f8208SBarry Smith *nrm = 0.0; 861637a0070SStefano Zampini v = av; 862d0f46423SBarry Smith for (j = 0; j < mdn->A->cmap->n; j++) { 863d0f46423SBarry Smith for (i = 0; i < mdn->A->rmap->n; i++) { 8649371c9d4SSatish Balay tmp[j] += PetscAbsScalar(*v); 8659371c9d4SSatish Balay v++; 8663501a2bdSLois Curfman McInnes } 8673501a2bdSLois Curfman McInnes } 8681c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(tmp, tmp2, A->cmap->N, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 869d0f46423SBarry Smith for (j = 0; j < A->cmap->N; j++) { 870064f8208SBarry Smith if (tmp2[j] > *nrm) *nrm = tmp2[j]; 8713501a2bdSLois Curfman McInnes } 8729566063dSJacob Faibussowitsch PetscCall(PetscFree2(tmp, tmp2)); 8739566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(A->cmap->n * A->rmap->n)); 8743a40ed3dSBarry Smith } else if (type == NORM_INFINITY) { /* max row norm */ 875329f5518SBarry Smith PetscReal ntemp; 8769566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, &ntemp)); 8771c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&ntemp, nrm, 1, MPIU_REAL, MPIU_MAX, PetscObjectComm((PetscObject)A))); 878ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for two norm"); 8793501a2bdSLois Curfman McInnes } 8809566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, &av)); 8813a40ed3dSBarry Smith PetscFunctionReturn(0); 8823501a2bdSLois Curfman McInnes } 8833501a2bdSLois Curfman McInnes 8849371c9d4SSatish Balay PetscErrorCode MatTranspose_MPIDense(Mat A, MatReuse reuse, Mat *matout) { 8853501a2bdSLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 8863501a2bdSLois Curfman McInnes Mat B; 887d0f46423SBarry Smith PetscInt M = A->rmap->N, N = A->cmap->N, m, n, *rwork, rstart = A->rmap->rstart; 888637a0070SStefano Zampini PetscInt j, i, lda; 88987828ca2SBarry Smith PetscScalar *v; 8903501a2bdSLois Curfman McInnes 8913a40ed3dSBarry Smith PetscFunctionBegin; 8927fb60732SBarry Smith if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *matout)); 893cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { 8949566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 8959566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->cmap->n, A->rmap->n, N, M)); 8969566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)A)->type_name)); 8979566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(B, NULL)); 898637a0070SStefano Zampini } else B = *matout; 8993501a2bdSLois Curfman McInnes 9009371c9d4SSatish Balay m = a->A->rmap->n; 9019371c9d4SSatish Balay n = a->A->cmap->n; 9029566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)&v)); 9039566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 9049566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &rwork)); 9053501a2bdSLois Curfman McInnes for (i = 0; i < m; i++) rwork[i] = rstart + i; 9061acff37aSSatish Balay for (j = 0; j < n; j++) { 9079566063dSJacob Faibussowitsch PetscCall(MatSetValues(B, 1, &j, m, rwork, v, INSERT_VALUES)); 908637a0070SStefano Zampini v += lda; 9093501a2bdSLois Curfman McInnes } 9109566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)&v)); 9119566063dSJacob Faibussowitsch PetscCall(PetscFree(rwork)); 9129566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 9139566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 914cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) { 9153501a2bdSLois Curfman McInnes *matout = B; 9163501a2bdSLois Curfman McInnes } else { 9179566063dSJacob Faibussowitsch PetscCall(MatHeaderMerge(A, &B)); 9183501a2bdSLois Curfman McInnes } 9193a40ed3dSBarry Smith PetscFunctionReturn(0); 920096963f5SLois Curfman McInnes } 921096963f5SLois Curfman McInnes 9226849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat, MatDuplicateOption, Mat *); 92352c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat, PetscScalar); 9248965ea79SLois Curfman McInnes 9259371c9d4SSatish Balay PetscErrorCode MatSetUp_MPIDense(Mat A) { 926273d9f13SBarry Smith PetscFunctionBegin; 9279566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 9289566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 92948a46eb9SPierre Jolivet if (!A->preallocated) PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 930273d9f13SBarry Smith PetscFunctionReturn(0); 931273d9f13SBarry Smith } 932273d9f13SBarry Smith 9339371c9d4SSatish Balay PetscErrorCode MatAXPY_MPIDense(Mat Y, PetscScalar alpha, Mat X, MatStructure str) { 934488007eeSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)Y->data, *B = (Mat_MPIDense *)X->data; 935488007eeSBarry Smith 936488007eeSBarry Smith PetscFunctionBegin; 9379566063dSJacob Faibussowitsch PetscCall(MatAXPY(A->A, alpha, B->A, str)); 938488007eeSBarry Smith PetscFunctionReturn(0); 939488007eeSBarry Smith } 940488007eeSBarry Smith 9419371c9d4SSatish Balay PetscErrorCode MatConjugate_MPIDense(Mat mat) { 942ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 943ba337c44SJed Brown 944ba337c44SJed Brown PetscFunctionBegin; 9459566063dSJacob Faibussowitsch PetscCall(MatConjugate(a->A)); 946ba337c44SJed Brown PetscFunctionReturn(0); 947ba337c44SJed Brown } 948ba337c44SJed Brown 9499371c9d4SSatish Balay PetscErrorCode MatRealPart_MPIDense(Mat A) { 950ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 951ba337c44SJed Brown 952ba337c44SJed Brown PetscFunctionBegin; 9539566063dSJacob Faibussowitsch PetscCall(MatRealPart(a->A)); 954ba337c44SJed Brown PetscFunctionReturn(0); 955ba337c44SJed Brown } 956ba337c44SJed Brown 9579371c9d4SSatish Balay PetscErrorCode MatImaginaryPart_MPIDense(Mat A) { 958ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 959ba337c44SJed Brown 960ba337c44SJed Brown PetscFunctionBegin; 9619566063dSJacob Faibussowitsch PetscCall(MatImaginaryPart(a->A)); 962ba337c44SJed Brown PetscFunctionReturn(0); 963ba337c44SJed Brown } 964ba337c44SJed Brown 9659371c9d4SSatish Balay static PetscErrorCode MatGetColumnVector_MPIDense(Mat A, Vec v, PetscInt col) { 966637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 96749a6ff4bSBarry Smith 96849a6ff4bSBarry Smith PetscFunctionBegin; 96928b400f6SJacob Faibussowitsch PetscCheck(a->A, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing local matrix"); 97028b400f6SJacob Faibussowitsch PetscCheck(a->A->ops->getcolumnvector, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing get column operation"); 9719566063dSJacob Faibussowitsch PetscCall((*a->A->ops->getcolumnvector)(a->A, v, col)); 97249a6ff4bSBarry Smith PetscFunctionReturn(0); 97349a6ff4bSBarry Smith } 97449a6ff4bSBarry Smith 975857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat, PetscInt, PetscReal *); 97652c5f739Sprj- 9779371c9d4SSatish Balay PetscErrorCode MatGetColumnReductions_MPIDense(Mat A, PetscInt type, PetscReal *reductions) { 978a873a8cdSSam Reynolds PetscInt i, m, n; 9790716a85fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 9800716a85fSBarry Smith PetscReal *work; 9810716a85fSBarry Smith 9820716a85fSBarry Smith PetscFunctionBegin; 9839566063dSJacob Faibussowitsch PetscCall(MatGetSize(A, &m, &n)); 9849566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &work)); 985857cbf51SRichard Tran Mills if (type == REDUCTION_MEAN_REALPART) { 9869566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_REALPART, work)); 987857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_IMAGINARYPART) { 9889566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_IMAGINARYPART, work)); 989a873a8cdSSam Reynolds } else { 9909566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, type, work)); 991a873a8cdSSam Reynolds } 992857cbf51SRichard Tran Mills if (type == NORM_2) { 9930716a85fSBarry Smith for (i = 0; i < n; i++) work[i] *= work[i]; 9940716a85fSBarry Smith } 995857cbf51SRichard Tran Mills if (type == NORM_INFINITY) { 9961c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(work, reductions, n, MPIU_REAL, MPIU_MAX, A->hdr.comm)); 9970716a85fSBarry Smith } else { 9981c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(work, reductions, n, MPIU_REAL, MPIU_SUM, A->hdr.comm)); 9990716a85fSBarry Smith } 10009566063dSJacob Faibussowitsch PetscCall(PetscFree(work)); 1001857cbf51SRichard Tran Mills if (type == NORM_2) { 1002a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] = PetscSqrtReal(reductions[i]); 1003857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) { 1004a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] /= m; 10050716a85fSBarry Smith } 10060716a85fSBarry Smith PetscFunctionReturn(0); 10070716a85fSBarry Smith } 10080716a85fSBarry Smith 1009637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 10109371c9d4SSatish Balay PetscErrorCode MatShift_MPIDenseCUDA(Mat A, PetscScalar alpha) { 1011126e4e93SJose E. Roman PetscScalar *da; 1012126e4e93SJose E. Roman PetscInt lda; 1013126e4e93SJose E. Roman 1014126e4e93SJose E. Roman PetscFunctionBegin; 1015126e4e93SJose E. Roman PetscCall(MatDenseCUDAGetArray(A, &da)); 1016126e4e93SJose E. Roman PetscCall(MatDenseGetLDA(A, &lda)); 1017126e4e93SJose E. Roman PetscCall(PetscInfo(A, "Performing Shift on backend\n")); 1018126e4e93SJose E. Roman PetscCall(MatShift_DenseCUDA_Private(da, alpha, lda, A->rmap->rstart, A->rmap->rend, A->cmap->N)); 1019126e4e93SJose E. Roman PetscCall(MatDenseCUDARestoreArray(A, &da)); 1020126e4e93SJose E. Roman PetscFunctionReturn(0); 1021126e4e93SJose E. Roman } 1022126e4e93SJose E. Roman 10239371c9d4SSatish Balay static PetscErrorCode MatDenseGetColumnVec_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) { 10246947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10256947451fSStefano Zampini PetscInt lda; 10266947451fSStefano Zampini 10276947451fSStefano Zampini PetscFunctionBegin; 102828b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 102928b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 10306947451fSStefano Zampini if (!a->cvec) { 10319566063dSJacob Faibussowitsch PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec)); 10329566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->cvec)); 10336947451fSStefano Zampini } 10346947451fSStefano Zampini a->vecinuse = col + 1; 10359566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 10369566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArray(a->A, (PetscScalar **)&a->ptrinuse)); 10379566063dSJacob Faibussowitsch PetscCall(VecCUDAPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda)); 10386947451fSStefano Zampini *v = a->cvec; 10396947451fSStefano Zampini PetscFunctionReturn(0); 10406947451fSStefano Zampini } 10416947451fSStefano Zampini 10429371c9d4SSatish Balay static PetscErrorCode MatDenseRestoreColumnVec_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) { 10436947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10446947451fSStefano Zampini 10456947451fSStefano Zampini PetscFunctionBegin; 104628b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 104728b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector"); 10486947451fSStefano Zampini a->vecinuse = 0; 10499566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArray(a->A, (PetscScalar **)&a->ptrinuse)); 10509566063dSJacob Faibussowitsch PetscCall(VecCUDAResetArray(a->cvec)); 1051742765d3SMatthew Knepley if (v) *v = NULL; 10526947451fSStefano Zampini PetscFunctionReturn(0); 10536947451fSStefano Zampini } 10546947451fSStefano Zampini 10559371c9d4SSatish Balay static PetscErrorCode MatDenseGetColumnVecRead_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) { 10566947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10576947451fSStefano Zampini PetscInt lda; 10586947451fSStefano Zampini 10596947451fSStefano Zampini PetscFunctionBegin; 106028b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 106128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 10626947451fSStefano Zampini if (!a->cvec) { 10639566063dSJacob Faibussowitsch PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec)); 10649566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->cvec)); 10656947451fSStefano Zampini } 10666947451fSStefano Zampini a->vecinuse = col + 1; 10679566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 10689566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArrayRead(a->A, &a->ptrinuse)); 10699566063dSJacob Faibussowitsch PetscCall(VecCUDAPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda)); 10709566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(a->cvec)); 10716947451fSStefano Zampini *v = a->cvec; 10726947451fSStefano Zampini PetscFunctionReturn(0); 10736947451fSStefano Zampini } 10746947451fSStefano Zampini 10759371c9d4SSatish Balay static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) { 10766947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10776947451fSStefano Zampini 10786947451fSStefano Zampini PetscFunctionBegin; 107928b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 108028b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 10816947451fSStefano Zampini a->vecinuse = 0; 10829566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArrayRead(a->A, &a->ptrinuse)); 10839566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(a->cvec)); 10849566063dSJacob Faibussowitsch PetscCall(VecCUDAResetArray(a->cvec)); 1085742765d3SMatthew Knepley if (v) *v = NULL; 10866947451fSStefano Zampini PetscFunctionReturn(0); 10876947451fSStefano Zampini } 10886947451fSStefano Zampini 10899371c9d4SSatish Balay static PetscErrorCode MatDenseGetColumnVecWrite_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) { 10906947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10916947451fSStefano Zampini PetscInt lda; 10926947451fSStefano Zampini 10936947451fSStefano Zampini PetscFunctionBegin; 109428b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 109528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 10966947451fSStefano Zampini if (!a->cvec) { 10979566063dSJacob Faibussowitsch PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec)); 10989566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->cvec)); 10996947451fSStefano Zampini } 11006947451fSStefano Zampini a->vecinuse = col + 1; 11019566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 11029566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 11039566063dSJacob Faibussowitsch PetscCall(VecCUDAPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda)); 11046947451fSStefano Zampini *v = a->cvec; 11056947451fSStefano Zampini PetscFunctionReturn(0); 11066947451fSStefano Zampini } 11076947451fSStefano Zampini 11089371c9d4SSatish Balay static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) { 11096947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 11106947451fSStefano Zampini 11116947451fSStefano Zampini PetscFunctionBegin; 111228b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 111328b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 11146947451fSStefano Zampini a->vecinuse = 0; 11159566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 11169566063dSJacob Faibussowitsch PetscCall(VecCUDAResetArray(a->cvec)); 1117742765d3SMatthew Knepley if (v) *v = NULL; 11186947451fSStefano Zampini PetscFunctionReturn(0); 11196947451fSStefano Zampini } 11206947451fSStefano Zampini 11219371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAPlaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a) { 1122637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1123637a0070SStefano Zampini 1124637a0070SStefano Zampini PetscFunctionBegin; 112528b400f6SJacob Faibussowitsch PetscCheck(!l->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 112628b400f6SJacob Faibussowitsch PetscCheck(!l->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 11279566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAPlaceArray(l->A, a)); 1128637a0070SStefano Zampini PetscFunctionReturn(0); 1129637a0070SStefano Zampini } 1130637a0070SStefano Zampini 11319371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAResetArray_MPIDenseCUDA(Mat A) { 1132637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1133637a0070SStefano Zampini 1134637a0070SStefano Zampini PetscFunctionBegin; 113528b400f6SJacob Faibussowitsch PetscCheck(!l->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 113628b400f6SJacob Faibussowitsch PetscCheck(!l->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 11379566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAResetArray(l->A)); 1138637a0070SStefano Zampini PetscFunctionReturn(0); 1139637a0070SStefano Zampini } 1140637a0070SStefano Zampini 11419371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAReplaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a) { 1142d5ea218eSStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1143d5ea218eSStefano Zampini 1144d5ea218eSStefano Zampini PetscFunctionBegin; 114528b400f6SJacob Faibussowitsch PetscCheck(!l->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 114628b400f6SJacob Faibussowitsch PetscCheck(!l->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 11479566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAReplaceArray(l->A, a)); 1148d5ea218eSStefano Zampini PetscFunctionReturn(0); 1149d5ea218eSStefano Zampini } 1150d5ea218eSStefano Zampini 11519371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAGetArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a) { 1152637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1153637a0070SStefano Zampini 1154637a0070SStefano Zampini PetscFunctionBegin; 11559566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArrayWrite(l->A, a)); 1156637a0070SStefano Zampini PetscFunctionReturn(0); 1157637a0070SStefano Zampini } 1158637a0070SStefano Zampini 11599371c9d4SSatish Balay static PetscErrorCode MatDenseCUDARestoreArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a) { 1160637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1161637a0070SStefano Zampini 1162637a0070SStefano Zampini PetscFunctionBegin; 11639566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArrayWrite(l->A, a)); 1164637a0070SStefano Zampini PetscFunctionReturn(0); 1165637a0070SStefano Zampini } 1166637a0070SStefano Zampini 11679371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAGetArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a) { 1168637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1169637a0070SStefano Zampini 1170637a0070SStefano Zampini PetscFunctionBegin; 11719566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArrayRead(l->A, a)); 1172637a0070SStefano Zampini PetscFunctionReturn(0); 1173637a0070SStefano Zampini } 1174637a0070SStefano Zampini 11759371c9d4SSatish Balay static PetscErrorCode MatDenseCUDARestoreArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a) { 1176637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1177637a0070SStefano Zampini 1178637a0070SStefano Zampini PetscFunctionBegin; 11799566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArrayRead(l->A, a)); 1180637a0070SStefano Zampini PetscFunctionReturn(0); 1181637a0070SStefano Zampini } 1182637a0070SStefano Zampini 11839371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAGetArray_MPIDenseCUDA(Mat A, PetscScalar **a) { 1184637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1185637a0070SStefano Zampini 1186637a0070SStefano Zampini PetscFunctionBegin; 11879566063dSJacob Faibussowitsch PetscCall(MatDenseCUDAGetArray(l->A, a)); 1188637a0070SStefano Zampini PetscFunctionReturn(0); 1189637a0070SStefano Zampini } 1190637a0070SStefano Zampini 11919371c9d4SSatish Balay static PetscErrorCode MatDenseCUDARestoreArray_MPIDenseCUDA(Mat A, PetscScalar **a) { 1192637a0070SStefano Zampini Mat_MPIDense *l = (Mat_MPIDense *)A->data; 1193637a0070SStefano Zampini 1194637a0070SStefano Zampini PetscFunctionBegin; 11959566063dSJacob Faibussowitsch PetscCall(MatDenseCUDARestoreArray(l->A, a)); 1196637a0070SStefano Zampini PetscFunctionReturn(0); 1197637a0070SStefano Zampini } 1198637a0070SStefano Zampini 11996947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat, PetscInt, Vec *); 12006947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat, PetscInt, Vec *); 12016947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat, PetscInt, Vec *); 12026947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat, PetscInt, Vec *); 12036947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat, PetscInt, Vec *); 12046947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat, PetscInt, Vec *); 12055ea7661aSPierre Jolivet static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat, Mat *); 12066947451fSStefano Zampini 12079371c9d4SSatish Balay static PetscErrorCode MatBindToCPU_MPIDenseCUDA(Mat mat, PetscBool bind) { 1208637a0070SStefano Zampini Mat_MPIDense *d = (Mat_MPIDense *)mat->data; 1209637a0070SStefano Zampini 1210637a0070SStefano Zampini PetscFunctionBegin; 121128b400f6SJacob Faibussowitsch PetscCheck(!d->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 121228b400f6SJacob Faibussowitsch PetscCheck(!d->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 12131baa6e33SBarry Smith if (d->A) PetscCall(MatBindToCPU(d->A, bind)); 1214637a0070SStefano Zampini mat->boundtocpu = bind; 12156947451fSStefano Zampini if (!bind) { 12166947451fSStefano Zampini PetscBool iscuda; 12176947451fSStefano Zampini 12189566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)d->cvec, VECMPICUDA, &iscuda)); 121948a46eb9SPierre Jolivet if (!iscuda) PetscCall(VecDestroy(&d->cvec)); 12209566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)d->cmat, MATMPIDENSECUDA, &iscuda)); 122148a46eb9SPierre Jolivet if (!iscuda) PetscCall(MatDestroy(&d->cmat)); 12229566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDenseCUDA)); 12239566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDenseCUDA)); 12249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDenseCUDA)); 12259566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDenseCUDA)); 12269566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDenseCUDA)); 12279566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDenseCUDA)); 1228126e4e93SJose E. Roman mat->ops->shift = MatShift_MPIDenseCUDA; 12296947451fSStefano Zampini } else { 12309566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense)); 12319566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense)); 12329566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense)); 12339566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense)); 12349566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense)); 12359566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense)); 1236126e4e93SJose E. Roman mat->ops->shift = MatShift_MPIDense; 1237616b8fbbSStefano Zampini } 12381baa6e33SBarry Smith if (d->cmat) PetscCall(MatBindToCPU(d->cmat, bind)); 1239637a0070SStefano Zampini PetscFunctionReturn(0); 1240637a0070SStefano Zampini } 1241637a0070SStefano Zampini 12429371c9d4SSatish Balay PetscErrorCode MatMPIDenseCUDASetPreallocation(Mat A, PetscScalar *d_data) { 1243637a0070SStefano Zampini Mat_MPIDense *d = (Mat_MPIDense *)A->data; 1244637a0070SStefano Zampini PetscBool iscuda; 1245637a0070SStefano Zampini 1246637a0070SStefano Zampini PetscFunctionBegin; 1247d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 12489566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda)); 1249637a0070SStefano Zampini if (!iscuda) PetscFunctionReturn(0); 12509566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 12519566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 1252637a0070SStefano Zampini if (!d->A) { 12539566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &d->A)); 12549566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)d->A)); 12559566063dSJacob Faibussowitsch PetscCall(MatSetSizes(d->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N)); 1256637a0070SStefano Zampini } 12579566063dSJacob Faibussowitsch PetscCall(MatSetType(d->A, MATSEQDENSECUDA)); 12589566063dSJacob Faibussowitsch PetscCall(MatSeqDenseCUDASetPreallocation(d->A, d_data)); 1259637a0070SStefano Zampini A->preallocated = PETSC_TRUE; 12606f08ad05SPierre Jolivet A->assembled = PETSC_TRUE; 1261637a0070SStefano Zampini PetscFunctionReturn(0); 1262637a0070SStefano Zampini } 1263637a0070SStefano Zampini #endif 1264637a0070SStefano Zampini 12659371c9d4SSatish Balay static PetscErrorCode MatSetRandom_MPIDense(Mat x, PetscRandom rctx) { 126673a71a0fSBarry Smith Mat_MPIDense *d = (Mat_MPIDense *)x->data; 126773a71a0fSBarry Smith 126873a71a0fSBarry Smith PetscFunctionBegin; 12699566063dSJacob Faibussowitsch PetscCall(MatSetRandom(d->A, rctx)); 127073a71a0fSBarry Smith PetscFunctionReturn(0); 127173a71a0fSBarry Smith } 127273a71a0fSBarry Smith 12739371c9d4SSatish Balay static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A, PetscBool *missing, PetscInt *d) { 12743b49f96aSBarry Smith PetscFunctionBegin; 12753b49f96aSBarry Smith *missing = PETSC_FALSE; 12763b49f96aSBarry Smith PetscFunctionReturn(0); 12773b49f96aSBarry Smith } 12783b49f96aSBarry Smith 12794222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1280cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12816718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1282a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12836718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat, Mat, PetscBool *); 12846718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat, PetscViewer); 1285cc48ffa7SToby Isaac 12868965ea79SLois Curfman McInnes /* -------------------------------------------------------------------*/ 128709dc0095SBarry Smith static struct _MatOps MatOps_Values = {MatSetValues_MPIDense, 128809dc0095SBarry Smith MatGetRow_MPIDense, 128909dc0095SBarry Smith MatRestoreRow_MPIDense, 129009dc0095SBarry Smith MatMult_MPIDense, 129197304618SKris Buschelman /* 4*/ MatMultAdd_MPIDense, 12927c922b88SBarry Smith MatMultTranspose_MPIDense, 12937c922b88SBarry Smith MatMultTransposeAdd_MPIDense, 1294f4259b30SLisandro Dalcin NULL, 1295f4259b30SLisandro Dalcin NULL, 1296f4259b30SLisandro Dalcin NULL, 1297f4259b30SLisandro Dalcin /* 10*/ NULL, 1298f4259b30SLisandro Dalcin NULL, 1299f4259b30SLisandro Dalcin NULL, 1300f4259b30SLisandro Dalcin NULL, 130109dc0095SBarry Smith MatTranspose_MPIDense, 130297304618SKris Buschelman /* 15*/ MatGetInfo_MPIDense, 13036e4ee0c6SHong Zhang MatEqual_MPIDense, 130409dc0095SBarry Smith MatGetDiagonal_MPIDense, 13055b2fa520SLois Curfman McInnes MatDiagonalScale_MPIDense, 130609dc0095SBarry Smith MatNorm_MPIDense, 130797304618SKris Buschelman /* 20*/ MatAssemblyBegin_MPIDense, 130809dc0095SBarry Smith MatAssemblyEnd_MPIDense, 130909dc0095SBarry Smith MatSetOption_MPIDense, 131009dc0095SBarry Smith MatZeroEntries_MPIDense, 1311d519adbfSMatthew Knepley /* 24*/ MatZeroRows_MPIDense, 1312f4259b30SLisandro Dalcin NULL, 1313f4259b30SLisandro Dalcin NULL, 1314f4259b30SLisandro Dalcin NULL, 1315f4259b30SLisandro Dalcin NULL, 13164994cf47SJed Brown /* 29*/ MatSetUp_MPIDense, 1317f4259b30SLisandro Dalcin NULL, 1318f4259b30SLisandro Dalcin NULL, 1319c56a70eeSBarry Smith MatGetDiagonalBlock_MPIDense, 1320f4259b30SLisandro Dalcin NULL, 1321d519adbfSMatthew Knepley /* 34*/ MatDuplicate_MPIDense, 1322f4259b30SLisandro Dalcin NULL, 1323f4259b30SLisandro Dalcin NULL, 1324f4259b30SLisandro Dalcin NULL, 1325f4259b30SLisandro Dalcin NULL, 1326d519adbfSMatthew Knepley /* 39*/ MatAXPY_MPIDense, 13277dae84e0SHong Zhang MatCreateSubMatrices_MPIDense, 1328f4259b30SLisandro Dalcin NULL, 132909dc0095SBarry Smith MatGetValues_MPIDense, 1330a76f77c3SStefano Zampini MatCopy_MPIDense, 1331f4259b30SLisandro Dalcin /* 44*/ NULL, 133209dc0095SBarry Smith MatScale_MPIDense, 13332f605a99SJose E. Roman MatShift_MPIDense, 1334f4259b30SLisandro Dalcin NULL, 1335f4259b30SLisandro Dalcin NULL, 133673a71a0fSBarry Smith /* 49*/ MatSetRandom_MPIDense, 1337f4259b30SLisandro Dalcin NULL, 1338f4259b30SLisandro Dalcin NULL, 1339f4259b30SLisandro Dalcin NULL, 1340f4259b30SLisandro Dalcin NULL, 1341f4259b30SLisandro Dalcin /* 54*/ NULL, 1342f4259b30SLisandro Dalcin NULL, 1343f4259b30SLisandro Dalcin NULL, 1344f4259b30SLisandro Dalcin NULL, 1345f4259b30SLisandro Dalcin NULL, 13467dae84e0SHong Zhang /* 59*/ MatCreateSubMatrix_MPIDense, 1347b9b97703SBarry Smith MatDestroy_MPIDense, 1348b9b97703SBarry Smith MatView_MPIDense, 1349f4259b30SLisandro Dalcin NULL, 1350f4259b30SLisandro Dalcin NULL, 1351f4259b30SLisandro Dalcin /* 64*/ NULL, 1352f4259b30SLisandro Dalcin NULL, 1353f4259b30SLisandro Dalcin NULL, 1354f4259b30SLisandro Dalcin NULL, 1355f4259b30SLisandro Dalcin NULL, 1356f4259b30SLisandro Dalcin /* 69*/ NULL, 1357f4259b30SLisandro Dalcin NULL, 1358f4259b30SLisandro Dalcin NULL, 1359f4259b30SLisandro Dalcin NULL, 1360f4259b30SLisandro Dalcin NULL, 1361f4259b30SLisandro Dalcin /* 74*/ NULL, 1362f4259b30SLisandro Dalcin NULL, 1363f4259b30SLisandro Dalcin NULL, 1364f4259b30SLisandro Dalcin NULL, 1365f4259b30SLisandro Dalcin NULL, 1366f4259b30SLisandro Dalcin /* 79*/ NULL, 1367f4259b30SLisandro Dalcin NULL, 1368f4259b30SLisandro Dalcin NULL, 1369f4259b30SLisandro Dalcin NULL, 13705bba2384SShri Abhyankar /* 83*/ MatLoad_MPIDense, 1371f4259b30SLisandro Dalcin NULL, 1372f4259b30SLisandro Dalcin NULL, 1373f4259b30SLisandro Dalcin NULL, 1374f4259b30SLisandro Dalcin NULL, 1375f4259b30SLisandro Dalcin NULL, 1376f4259b30SLisandro Dalcin /* 89*/ NULL, 1377f4259b30SLisandro Dalcin NULL, 1378f4259b30SLisandro Dalcin NULL, 1379f4259b30SLisandro Dalcin NULL, 1380f4259b30SLisandro Dalcin NULL, 1381f4259b30SLisandro Dalcin /* 94*/ NULL, 1382f4259b30SLisandro Dalcin NULL, 13836718818eSStefano Zampini MatMatTransposeMultSymbolic_MPIDense_MPIDense, 1384cc48ffa7SToby Isaac MatMatTransposeMultNumeric_MPIDense_MPIDense, 1385f4259b30SLisandro Dalcin NULL, 13864222ddf1SHong Zhang /* 99*/ MatProductSetFromOptions_MPIDense, 1387f4259b30SLisandro Dalcin NULL, 1388f4259b30SLisandro Dalcin NULL, 1389ba337c44SJed Brown MatConjugate_MPIDense, 1390f4259b30SLisandro Dalcin NULL, 1391f4259b30SLisandro Dalcin /*104*/ NULL, 1392ba337c44SJed Brown MatRealPart_MPIDense, 1393ba337c44SJed Brown MatImaginaryPart_MPIDense, 1394f4259b30SLisandro Dalcin NULL, 1395f4259b30SLisandro Dalcin NULL, 1396f4259b30SLisandro Dalcin /*109*/ NULL, 1397f4259b30SLisandro Dalcin NULL, 1398f4259b30SLisandro Dalcin NULL, 139949a6ff4bSBarry Smith MatGetColumnVector_MPIDense, 14003b49f96aSBarry Smith MatMissingDiagonal_MPIDense, 1401f4259b30SLisandro Dalcin /*114*/ NULL, 1402f4259b30SLisandro Dalcin NULL, 1403f4259b30SLisandro Dalcin NULL, 1404f4259b30SLisandro Dalcin NULL, 1405f4259b30SLisandro Dalcin NULL, 1406f4259b30SLisandro Dalcin /*119*/ NULL, 1407f4259b30SLisandro Dalcin NULL, 1408f4259b30SLisandro Dalcin NULL, 1409f4259b30SLisandro Dalcin NULL, 1410f4259b30SLisandro Dalcin NULL, 1411f4259b30SLisandro Dalcin /*124*/ NULL, 1412a873a8cdSSam Reynolds MatGetColumnReductions_MPIDense, 1413f4259b30SLisandro Dalcin NULL, 1414f4259b30SLisandro Dalcin NULL, 1415f4259b30SLisandro Dalcin NULL, 1416f4259b30SLisandro Dalcin /*129*/ NULL, 1417f4259b30SLisandro Dalcin NULL, 14186718818eSStefano Zampini MatTransposeMatMultSymbolic_MPIDense_MPIDense, 1419cb20be35SHong Zhang MatTransposeMatMultNumeric_MPIDense_MPIDense, 1420f4259b30SLisandro Dalcin NULL, 1421f4259b30SLisandro Dalcin /*134*/ NULL, 1422f4259b30SLisandro Dalcin NULL, 1423f4259b30SLisandro Dalcin NULL, 1424f4259b30SLisandro Dalcin NULL, 1425f4259b30SLisandro Dalcin NULL, 1426f4259b30SLisandro Dalcin /*139*/ NULL, 1427f4259b30SLisandro Dalcin NULL, 1428f4259b30SLisandro Dalcin NULL, 1429f4259b30SLisandro Dalcin NULL, 1430f4259b30SLisandro Dalcin NULL, 14314222ddf1SHong Zhang MatCreateMPIMatConcatenateSeqMat_MPIDense, 1432f4259b30SLisandro Dalcin /*145*/ NULL, 1433f4259b30SLisandro Dalcin NULL, 143499a7f59eSMark Adams NULL, 143599a7f59eSMark Adams NULL, 14367fb60732SBarry Smith NULL, 14379371c9d4SSatish Balay /*150*/ NULL}; 14388965ea79SLois Curfman McInnes 14399371c9d4SSatish Balay PetscErrorCode MatMPIDenseSetPreallocation_MPIDense(Mat mat, PetscScalar *data) { 1440637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 1441637a0070SStefano Zampini PetscBool iscuda; 1442a23d5eceSKris Buschelman 1443a23d5eceSKris Buschelman PetscFunctionBegin; 144428b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 14459566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->rmap)); 14469566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->cmap)); 1447637a0070SStefano Zampini if (!a->A) { 14489566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 14499566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)mat, (PetscObject)a->A)); 14509566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, mat->rmap->n, mat->cmap->N, mat->rmap->n, mat->cmap->N)); 1451637a0070SStefano Zampini } 14529566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSECUDA, &iscuda)); 14539566063dSJacob Faibussowitsch PetscCall(MatSetType(a->A, iscuda ? MATSEQDENSECUDA : MATSEQDENSE)); 14549566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(a->A, data)); 1455637a0070SStefano Zampini mat->preallocated = PETSC_TRUE; 14566f08ad05SPierre Jolivet mat->assembled = PETSC_TRUE; 1457a23d5eceSKris Buschelman PetscFunctionReturn(0); 1458a23d5eceSKris Buschelman } 1459a23d5eceSKris Buschelman 14609371c9d4SSatish Balay PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) { 14614e29119aSPierre Jolivet Mat B, C; 14624e29119aSPierre Jolivet 14634e29119aSPierre Jolivet PetscFunctionBegin; 14649566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMat(A, MAT_INITIAL_MATRIX, &C)); 14659566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqDense(C, MATSEQDENSE, MAT_INITIAL_MATRIX, &B)); 14669566063dSJacob Faibussowitsch PetscCall(MatDestroy(&C)); 14674e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14684e29119aSPierre Jolivet C = *newmat; 14694e29119aSPierre Jolivet } else C = NULL; 14709566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14719566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 14724e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 14739566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 14744e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 14754e29119aSPierre Jolivet PetscFunctionReturn(0); 14764e29119aSPierre Jolivet } 14774e29119aSPierre Jolivet 14789371c9d4SSatish Balay PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) { 14794e29119aSPierre Jolivet Mat B, C; 14804e29119aSPierre Jolivet 14814e29119aSPierre Jolivet PetscFunctionBegin; 14829566063dSJacob Faibussowitsch PetscCall(MatDenseGetLocalMatrix(A, &C)); 14839566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqDense_SeqAIJ(C, MATSEQAIJ, MAT_INITIAL_MATRIX, &B)); 14844e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14854e29119aSPierre Jolivet C = *newmat; 14864e29119aSPierre Jolivet } else C = NULL; 14879566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14889566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 14894e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 14909566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 14914e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 14924e29119aSPierre Jolivet PetscFunctionReturn(0); 14934e29119aSPierre Jolivet } 14944e29119aSPierre Jolivet 149565b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 14969371c9d4SSatish Balay PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) { 14978ea901baSHong Zhang Mat mat_elemental; 149832d7a744SHong Zhang PetscScalar *v; 149932d7a744SHong Zhang PetscInt m = A->rmap->n, N = A->cmap->N, rstart = A->rmap->rstart, i, *rows, *cols; 15008ea901baSHong Zhang 15018baccfbdSHong Zhang PetscFunctionBegin; 1502378336b6SHong Zhang if (reuse == MAT_REUSE_MATRIX) { 1503378336b6SHong Zhang mat_elemental = *newmat; 15049566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(*newmat)); 1505378336b6SHong Zhang } else { 15069566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental)); 15079566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat_elemental, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 15089566063dSJacob Faibussowitsch PetscCall(MatSetType(mat_elemental, MATELEMENTAL)); 15099566063dSJacob Faibussowitsch PetscCall(MatSetUp(mat_elemental)); 15109566063dSJacob Faibussowitsch PetscCall(MatSetOption(mat_elemental, MAT_ROW_ORIENTED, PETSC_FALSE)); 1511378336b6SHong Zhang } 1512378336b6SHong Zhang 15139566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &rows, N, &cols)); 151432d7a744SHong Zhang for (i = 0; i < N; i++) cols[i] = i; 151532d7a744SHong Zhang for (i = 0; i < m; i++) rows[i] = rstart + i; 15168ea901baSHong Zhang 1517637a0070SStefano Zampini /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */ 15189566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(A, &v)); 15199566063dSJacob Faibussowitsch PetscCall(MatSetValues(mat_elemental, m, rows, N, cols, v, ADD_VALUES)); 15209566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY)); 15219566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY)); 15229566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(A, &v)); 15239566063dSJacob Faibussowitsch PetscCall(PetscFree2(rows, cols)); 15248ea901baSHong Zhang 1525511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 15269566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &mat_elemental)); 15278ea901baSHong Zhang } else { 15288ea901baSHong Zhang *newmat = mat_elemental; 15298ea901baSHong Zhang } 15308baccfbdSHong Zhang PetscFunctionReturn(0); 15318baccfbdSHong Zhang } 153265b80a83SHong Zhang #endif 15338baccfbdSHong Zhang 15349371c9d4SSatish Balay static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A, PetscInt col, PetscScalar **vals) { 153586aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 153686aefd0dSHong Zhang 153786aefd0dSHong Zhang PetscFunctionBegin; 15389566063dSJacob Faibussowitsch PetscCall(MatDenseGetColumn(mat->A, col, vals)); 153986aefd0dSHong Zhang PetscFunctionReturn(0); 154086aefd0dSHong Zhang } 154186aefd0dSHong Zhang 15429371c9d4SSatish Balay static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A, PetscScalar **vals) { 154386aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 154486aefd0dSHong Zhang 154586aefd0dSHong Zhang PetscFunctionBegin; 15469566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreColumn(mat->A, vals)); 154786aefd0dSHong Zhang PetscFunctionReturn(0); 154886aefd0dSHong Zhang } 154986aefd0dSHong Zhang 15509371c9d4SSatish Balay PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm, Mat inmat, PetscInt n, MatReuse scall, Mat *outmat) { 155194e2cb23SJakub Kruzik Mat_MPIDense *mat; 155294e2cb23SJakub Kruzik PetscInt m, nloc, N; 155394e2cb23SJakub Kruzik 155494e2cb23SJakub Kruzik PetscFunctionBegin; 15559566063dSJacob Faibussowitsch PetscCall(MatGetSize(inmat, &m, &N)); 15569566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(inmat, NULL, &nloc)); 155794e2cb23SJakub Kruzik if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */ 155894e2cb23SJakub Kruzik PetscInt sum; 155994e2cb23SJakub Kruzik 156048a46eb9SPierre Jolivet if (n == PETSC_DECIDE) PetscCall(PetscSplitOwnership(comm, &n, &N)); 156194e2cb23SJakub Kruzik /* Check sum(n) = N */ 15621c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&n, &sum, 1, MPIU_INT, MPI_SUM, comm)); 156308401ef6SPierre Jolivet PetscCheck(sum == N, PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT, sum, N); 156494e2cb23SJakub Kruzik 15659566063dSJacob Faibussowitsch PetscCall(MatCreateDense(comm, m, n, PETSC_DETERMINE, N, NULL, outmat)); 15669566063dSJacob Faibussowitsch PetscCall(MatSetOption(*outmat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 156794e2cb23SJakub Kruzik } 156894e2cb23SJakub Kruzik 156994e2cb23SJakub Kruzik /* numeric phase */ 157094e2cb23SJakub Kruzik mat = (Mat_MPIDense *)(*outmat)->data; 15719566063dSJacob Faibussowitsch PetscCall(MatCopy(inmat, mat->A, SAME_NONZERO_PATTERN)); 157294e2cb23SJakub Kruzik PetscFunctionReturn(0); 157394e2cb23SJakub Kruzik } 157494e2cb23SJakub Kruzik 1575637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 15769371c9d4SSatish Balay PetscErrorCode MatConvert_MPIDenseCUDA_MPIDense(Mat M, MatType type, MatReuse reuse, Mat *newmat) { 1577637a0070SStefano Zampini Mat B; 1578637a0070SStefano Zampini Mat_MPIDense *m; 1579637a0070SStefano Zampini 1580637a0070SStefano Zampini PetscFunctionBegin; 1581637a0070SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 15829566063dSJacob Faibussowitsch PetscCall(MatDuplicate(M, MAT_COPY_VALUES, newmat)); 1583637a0070SStefano Zampini } else if (reuse == MAT_REUSE_MATRIX) { 15849566063dSJacob Faibussowitsch PetscCall(MatCopy(M, *newmat, SAME_NONZERO_PATTERN)); 1585637a0070SStefano Zampini } 1586637a0070SStefano Zampini 1587637a0070SStefano Zampini B = *newmat; 15889566063dSJacob Faibussowitsch PetscCall(MatBindToCPU_MPIDenseCUDA(B, PETSC_TRUE)); 15899566063dSJacob Faibussowitsch PetscCall(PetscFree(B->defaultvectype)); 15909566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(VECSTANDARD, &B->defaultvectype)); 15919566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)B, MATMPIDENSE)); 15929566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatConvert_mpidensecuda_mpidense_C", NULL)); 15939566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL)); 15949566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL)); 15959566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL)); 15969566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL)); 15979566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArray_C", NULL)); 15989566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArrayRead_C", NULL)); 15999566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArrayWrite_C", NULL)); 16009566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArray_C", NULL)); 16019566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArrayRead_C", NULL)); 16029566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArrayWrite_C", NULL)); 16039566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAPlaceArray_C", NULL)); 16049566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAResetArray_C", NULL)); 16059566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAReplaceArray_C", NULL)); 1606637a0070SStefano Zampini m = (Mat_MPIDense *)(B)->data; 160748a46eb9SPierre Jolivet if (m->A) PetscCall(MatConvert(m->A, MATSEQDENSE, MAT_INPLACE_MATRIX, &m->A)); 1608637a0070SStefano Zampini B->ops->bindtocpu = NULL; 1609637a0070SStefano Zampini B->offloadmask = PETSC_OFFLOAD_CPU; 1610637a0070SStefano Zampini PetscFunctionReturn(0); 1611637a0070SStefano Zampini } 1612637a0070SStefano Zampini 16139371c9d4SSatish Balay PetscErrorCode MatConvert_MPIDense_MPIDenseCUDA(Mat M, MatType type, MatReuse reuse, Mat *newmat) { 1614637a0070SStefano Zampini Mat B; 1615637a0070SStefano Zampini Mat_MPIDense *m; 1616637a0070SStefano Zampini 1617637a0070SStefano Zampini PetscFunctionBegin; 1618637a0070SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 16199566063dSJacob Faibussowitsch PetscCall(MatDuplicate(M, MAT_COPY_VALUES, newmat)); 1620637a0070SStefano Zampini } else if (reuse == MAT_REUSE_MATRIX) { 16219566063dSJacob Faibussowitsch PetscCall(MatCopy(M, *newmat, SAME_NONZERO_PATTERN)); 1622637a0070SStefano Zampini } 1623637a0070SStefano Zampini 1624637a0070SStefano Zampini B = *newmat; 16259566063dSJacob Faibussowitsch PetscCall(PetscFree(B->defaultvectype)); 16269566063dSJacob Faibussowitsch PetscCall(PetscStrallocpy(VECCUDA, &B->defaultvectype)); 16279566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)B, MATMPIDENSECUDA)); 16289566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatConvert_mpidensecuda_mpidense_C", MatConvert_MPIDenseCUDA_MPIDense)); 16299566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 16309566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 16319566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 16329566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 16339566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArray_C", MatDenseCUDAGetArray_MPIDenseCUDA)); 16349566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArrayRead_C", MatDenseCUDAGetArrayRead_MPIDenseCUDA)); 16359566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArrayWrite_C", MatDenseCUDAGetArrayWrite_MPIDenseCUDA)); 16369566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArray_C", MatDenseCUDARestoreArray_MPIDenseCUDA)); 16379566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArrayRead_C", MatDenseCUDARestoreArrayRead_MPIDenseCUDA)); 16389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArrayWrite_C", MatDenseCUDARestoreArrayWrite_MPIDenseCUDA)); 16399566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAPlaceArray_C", MatDenseCUDAPlaceArray_MPIDenseCUDA)); 16409566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAResetArray_C", MatDenseCUDAResetArray_MPIDenseCUDA)); 16419566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAReplaceArray_C", MatDenseCUDAReplaceArray_MPIDenseCUDA)); 1642f5ff9c66SStefano Zampini m = (Mat_MPIDense *)(B->data); 1643637a0070SStefano Zampini if (m->A) { 16449566063dSJacob Faibussowitsch PetscCall(MatConvert(m->A, MATSEQDENSECUDA, MAT_INPLACE_MATRIX, &m->A)); 1645637a0070SStefano Zampini B->offloadmask = PETSC_OFFLOAD_BOTH; 1646637a0070SStefano Zampini } else { 1647637a0070SStefano Zampini B->offloadmask = PETSC_OFFLOAD_UNALLOCATED; 1648637a0070SStefano Zampini } 16499566063dSJacob Faibussowitsch PetscCall(MatBindToCPU_MPIDenseCUDA(B, PETSC_FALSE)); 1650637a0070SStefano Zampini 1651637a0070SStefano Zampini B->ops->bindtocpu = MatBindToCPU_MPIDenseCUDA; 1652637a0070SStefano Zampini PetscFunctionReturn(0); 1653637a0070SStefano Zampini } 1654637a0070SStefano Zampini #endif 1655637a0070SStefano Zampini 16569371c9d4SSatish Balay PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) { 16576947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16586947451fSStefano Zampini PetscInt lda; 16596947451fSStefano Zampini 16606947451fSStefano Zampini PetscFunctionBegin; 166128b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 166228b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 166348a46eb9SPierre Jolivet if (!a->cvec) PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec)); 16646947451fSStefano Zampini a->vecinuse = col + 1; 16659566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 16669566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, (PetscScalar **)&a->ptrinuse)); 16679566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda)); 16686947451fSStefano Zampini *v = a->cvec; 16696947451fSStefano Zampini PetscFunctionReturn(0); 16706947451fSStefano Zampini } 16716947451fSStefano Zampini 16729371c9d4SSatish Balay PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) { 16736947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16746947451fSStefano Zampini 16756947451fSStefano Zampini PetscFunctionBegin; 167628b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 167728b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector"); 16786947451fSStefano Zampini a->vecinuse = 0; 16799566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, (PetscScalar **)&a->ptrinuse)); 16809566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1681742765d3SMatthew Knepley if (v) *v = NULL; 16826947451fSStefano Zampini PetscFunctionReturn(0); 16836947451fSStefano Zampini } 16846947451fSStefano Zampini 16859371c9d4SSatish Balay PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) { 16866947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16876947451fSStefano Zampini PetscInt lda; 16886947451fSStefano Zampini 16896947451fSStefano Zampini PetscFunctionBegin; 169028b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 169128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 169248a46eb9SPierre Jolivet if (!a->cvec) PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec)); 16936947451fSStefano Zampini a->vecinuse = col + 1; 16949566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 16959566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &a->ptrinuse)); 16969566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda)); 16979566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(a->cvec)); 16986947451fSStefano Zampini *v = a->cvec; 16996947451fSStefano Zampini PetscFunctionReturn(0); 17006947451fSStefano Zampini } 17016947451fSStefano Zampini 17029371c9d4SSatish Balay PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) { 17036947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 17046947451fSStefano Zampini 17056947451fSStefano Zampini PetscFunctionBegin; 17065f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 17075f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 17086947451fSStefano Zampini a->vecinuse = 0; 17099566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &a->ptrinuse)); 17109566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(a->cvec)); 17119566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1712742765d3SMatthew Knepley if (v) *v = NULL; 17136947451fSStefano Zampini PetscFunctionReturn(0); 17146947451fSStefano Zampini } 17156947451fSStefano Zampini 17169371c9d4SSatish Balay PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) { 17176947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 17186947451fSStefano Zampini PetscInt lda; 17196947451fSStefano Zampini 17206947451fSStefano Zampini PetscFunctionBegin; 17215f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 17225f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 172348a46eb9SPierre Jolivet if (!a->cvec) PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec)); 17246947451fSStefano Zampini a->vecinuse = col + 1; 17259566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 17269566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 17279566063dSJacob Faibussowitsch PetscCall(VecPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda)); 17286947451fSStefano Zampini *v = a->cvec; 17296947451fSStefano Zampini PetscFunctionReturn(0); 17306947451fSStefano Zampini } 17316947451fSStefano Zampini 17329371c9d4SSatish Balay PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) { 17336947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 17346947451fSStefano Zampini 17356947451fSStefano Zampini PetscFunctionBegin; 17365f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 17375f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 17386947451fSStefano Zampini a->vecinuse = 0; 17399566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 17409566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1741742765d3SMatthew Knepley if (v) *v = NULL; 17426947451fSStefano Zampini PetscFunctionReturn(0); 17436947451fSStefano Zampini } 17446947451fSStefano Zampini 17459371c9d4SSatish Balay PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A, PetscInt rbegin, PetscInt rend, PetscInt cbegin, PetscInt cend, Mat *v) { 17465ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1747616b8fbbSStefano Zampini Mat_MPIDense *c; 1748616b8fbbSStefano Zampini MPI_Comm comm; 1749a2748737SPierre Jolivet PetscInt pbegin, pend; 17505ea7661aSPierre Jolivet 17515ea7661aSPierre Jolivet PetscFunctionBegin; 17529566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 17535f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 17545f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1755a2748737SPierre Jolivet pbegin = PetscMax(0, PetscMin(A->rmap->rend, rbegin) - A->rmap->rstart); 1756a2748737SPierre Jolivet pend = PetscMin(A->rmap->n, PetscMax(0, rend - A->rmap->rstart)); 17575ea7661aSPierre Jolivet if (!a->cmat) { 17589566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &a->cmat)); 17599566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->cmat)); 17609566063dSJacob Faibussowitsch PetscCall(MatSetType(a->cmat, ((PetscObject)A)->type_name)); 1761a2748737SPierre Jolivet if (rend - rbegin == A->rmap->N) PetscCall(PetscLayoutReference(A->rmap, &a->cmat->rmap)); 1762a2748737SPierre Jolivet else { 1763a2748737SPierre Jolivet PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, pend - pbegin)); 1764a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1765a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1766a2748737SPierre Jolivet } 17679566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 17689566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1769a2748737SPierre Jolivet } else { 1770a2748737SPierre Jolivet PetscBool same = (PetscBool)(rend - rbegin == a->cmat->rmap->N); 1771a2748737SPierre Jolivet if (same && a->cmat->rmap->N != A->rmap->N) { 1772a2748737SPierre Jolivet same = (PetscBool)(pend - pbegin == a->cmat->rmap->n); 1773a2748737SPierre Jolivet PetscCall(MPIU_Allreduce(MPI_IN_PLACE, &same, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 1774a2748737SPierre Jolivet } 1775a2748737SPierre Jolivet if (!same) { 1776a2748737SPierre Jolivet PetscCall(PetscLayoutDestroy(&a->cmat->rmap)); 1777a2748737SPierre Jolivet PetscCall(PetscLayoutCreate(comm, &a->cmat->rmap)); 1778a2748737SPierre Jolivet PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, pend - pbegin)); 1779a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1780a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1781a2748737SPierre Jolivet } 1782a2748737SPierre Jolivet if (cend - cbegin != a->cmat->cmap->N) { 17839566063dSJacob Faibussowitsch PetscCall(PetscLayoutDestroy(&a->cmat->cmap)); 17849566063dSJacob Faibussowitsch PetscCall(PetscLayoutCreate(comm, &a->cmat->cmap)); 17859566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 17869566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 17875ea7661aSPierre Jolivet } 1788a2748737SPierre Jolivet } 1789616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 17905f80ce2aSJacob Faibussowitsch PetscCheck(!c->A, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1791a2748737SPierre Jolivet PetscCall(MatDenseGetSubMatrix(a->A, pbegin, pend, cbegin, cend, &c->A)); 1792616b8fbbSStefano Zampini a->cmat->preallocated = PETSC_TRUE; 1793616b8fbbSStefano Zampini a->cmat->assembled = PETSC_TRUE; 17945ea7661aSPierre Jolivet a->matinuse = cbegin + 1; 17955ea7661aSPierre Jolivet *v = a->cmat; 17965ea7661aSPierre Jolivet PetscFunctionReturn(0); 17975ea7661aSPierre Jolivet } 17985ea7661aSPierre Jolivet 17999371c9d4SSatish Balay PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A, Mat *v) { 18005ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1801616b8fbbSStefano Zampini Mat_MPIDense *c; 18025ea7661aSPierre Jolivet 18035ea7661aSPierre Jolivet PetscFunctionBegin; 18045f80ce2aSJacob Faibussowitsch PetscCheck(a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetSubMatrix() first"); 18055f80ce2aSJacob Faibussowitsch PetscCheck(a->cmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal matrix"); 18065f80ce2aSJacob Faibussowitsch PetscCheck(*v == a->cmat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Not the matrix obtained from MatDenseGetSubMatrix()"); 18075ea7661aSPierre Jolivet a->matinuse = 0; 1808616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 18099566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreSubMatrix(a->A, &c->A)); 1810742765d3SMatthew Knepley if (v) *v = NULL; 18115ea7661aSPierre Jolivet PetscFunctionReturn(0); 18125ea7661aSPierre Jolivet } 18135ea7661aSPierre Jolivet 1814002bc6daSRichard Tran Mills /*MC 1815002bc6daSRichard Tran Mills MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices. 1816002bc6daSRichard Tran Mills 1817002bc6daSRichard Tran Mills Options Database Keys: 1818002bc6daSRichard Tran Mills . -mat_type mpidense - sets the matrix type to "mpidense" during a call to MatSetFromOptions() 1819002bc6daSRichard Tran Mills 1820002bc6daSRichard Tran Mills Level: beginner 1821002bc6daSRichard Tran Mills 1822db781477SPatrick Sanan .seealso: `MatCreateDense()` 1823002bc6daSRichard Tran Mills 1824002bc6daSRichard Tran Mills M*/ 18259371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode MatCreate_MPIDense(Mat mat) { 1826273d9f13SBarry Smith Mat_MPIDense *a; 1827273d9f13SBarry Smith 1828273d9f13SBarry Smith PetscFunctionBegin; 18299566063dSJacob Faibussowitsch PetscCall(PetscNewLog(mat, &a)); 1830b0a32e0cSBarry Smith mat->data = (void *)a; 18319566063dSJacob Faibussowitsch PetscCall(PetscMemcpy(mat->ops, &MatOps_Values, sizeof(struct _MatOps))); 1832273d9f13SBarry Smith 1833273d9f13SBarry Smith mat->insertmode = NOT_SET_VALUES; 1834273d9f13SBarry Smith 1835273d9f13SBarry Smith /* build cache for off array entries formed */ 1836273d9f13SBarry Smith a->donotstash = PETSC_FALSE; 18372205254eSKarl Rupp 18389566063dSJacob Faibussowitsch PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat), 1, &mat->stash)); 1839273d9f13SBarry Smith 1840273d9f13SBarry Smith /* stuff used for matrix vector multiply */ 1841f4259b30SLisandro Dalcin a->lvec = NULL; 1842f4259b30SLisandro Dalcin a->Mvctx = NULL; 1843273d9f13SBarry Smith a->roworiented = PETSC_TRUE; 1844273d9f13SBarry Smith 18459566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", MatDenseGetLDA_MPIDense)); 18469566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", MatDenseSetLDA_MPIDense)); 18479566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", MatDenseGetArray_MPIDense)); 18489566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", MatDenseRestoreArray_MPIDense)); 18499566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", MatDenseGetArrayRead_MPIDense)); 18509566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", MatDenseRestoreArrayRead_MPIDense)); 18519566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", MatDenseGetArrayWrite_MPIDense)); 18529566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", MatDenseRestoreArrayWrite_MPIDense)); 18539566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", MatDensePlaceArray_MPIDense)); 18549566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", MatDenseResetArray_MPIDense)); 18559566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", MatDenseReplaceArray_MPIDense)); 18569566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense)); 18579566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense)); 18589566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense)); 18599566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense)); 18609566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense)); 18619566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense)); 18629566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", MatDenseGetSubMatrix_MPIDense)); 18639566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", MatDenseRestoreSubMatrix_MPIDense)); 18649566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", MatConvert_MPIAIJ_MPIDense)); 18659566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", MatConvert_MPIDense_MPIAIJ)); 18668baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 18679566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", MatConvert_MPIDense_Elemental)); 18688baccfbdSHong Zhang #endif 1869d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 18709566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", MatConvert_Dense_ScaLAPACK)); 1871d24d4204SJose E. Roman #endif 1872637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 18739566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", MatConvert_MPIDense_MPIDenseCUDA)); 1874637a0070SStefano Zampini #endif 18759566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", MatMPIDenseSetPreallocation_MPIDense)); 18769566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 18779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 18786718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 18799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 18809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 18816718818eSStefano Zampini #endif 18828949adfdSHong Zhang 18839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", MatDenseGetColumn_MPIDense)); 18849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", MatDenseRestoreColumn_MPIDense)); 18859566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATMPIDENSE)); 1886273d9f13SBarry Smith PetscFunctionReturn(0); 1887273d9f13SBarry Smith } 1888273d9f13SBarry Smith 1889209238afSKris Buschelman /*MC 1890637a0070SStefano Zampini MATMPIDENSECUDA - MATMPIDENSECUDA = "mpidensecuda" - A matrix type to be used for distributed dense matrices on GPUs. 1891637a0070SStefano Zampini 1892637a0070SStefano Zampini Options Database Keys: 1893637a0070SStefano Zampini . -mat_type mpidensecuda - sets the matrix type to "mpidensecuda" during a call to MatSetFromOptions() 1894637a0070SStefano Zampini 1895637a0070SStefano Zampini Level: beginner 1896637a0070SStefano Zampini 1897637a0070SStefano Zampini .seealso: 1898637a0070SStefano Zampini 1899637a0070SStefano Zampini M*/ 1900637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 1901a4af0ceeSJacob Faibussowitsch #include <petsc/private/deviceimpl.h> 19029371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode MatCreate_MPIDenseCUDA(Mat B) { 1903637a0070SStefano Zampini PetscFunctionBegin; 19049566063dSJacob Faibussowitsch PetscCall(PetscDeviceInitialize(PETSC_DEVICE_CUDA)); 19059566063dSJacob Faibussowitsch PetscCall(MatCreate_MPIDense(B)); 19069566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_MPIDenseCUDA(B, MATMPIDENSECUDA, MAT_INPLACE_MATRIX, &B)); 1907637a0070SStefano Zampini PetscFunctionReturn(0); 1908637a0070SStefano Zampini } 1909637a0070SStefano Zampini #endif 1910637a0070SStefano Zampini 1911637a0070SStefano Zampini /*MC 1912002d173eSKris Buschelman MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices. 1913209238afSKris Buschelman 1914209238afSKris Buschelman This matrix type is identical to MATSEQDENSE when constructed with a single process communicator, 1915209238afSKris Buschelman and MATMPIDENSE otherwise. 1916209238afSKris Buschelman 1917209238afSKris Buschelman Options Database Keys: 1918209238afSKris Buschelman . -mat_type dense - sets the matrix type to "dense" during a call to MatSetFromOptions() 1919209238afSKris Buschelman 1920209238afSKris Buschelman Level: beginner 1921209238afSKris Buschelman 1922c2e3fba1SPatrick Sanan .seealso: `MATSEQDENSE`, `MATMPIDENSE`, `MATDENSECUDA` 19236947451fSStefano Zampini M*/ 19246947451fSStefano Zampini 19256947451fSStefano Zampini /*MC 19266947451fSStefano Zampini MATDENSECUDA - MATDENSECUDA = "densecuda" - A matrix type to be used for dense matrices on GPUs. 19276947451fSStefano Zampini 19286947451fSStefano Zampini This matrix type is identical to MATSEQDENSECUDA when constructed with a single process communicator, 19296947451fSStefano Zampini and MATMPIDENSECUDA otherwise. 19306947451fSStefano Zampini 19316947451fSStefano Zampini Options Database Keys: 19326947451fSStefano Zampini . -mat_type densecuda - sets the matrix type to "densecuda" during a call to MatSetFromOptions() 19336947451fSStefano Zampini 19346947451fSStefano Zampini Level: beginner 19356947451fSStefano Zampini 1936c2e3fba1SPatrick Sanan .seealso: `MATSEQDENSECUDA`, `MATMPIDENSECUDA`, `MATDENSE` 1937209238afSKris Buschelman M*/ 1938209238afSKris Buschelman 1939273d9f13SBarry Smith /*@C 1940273d9f13SBarry Smith MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries 1941273d9f13SBarry Smith 19428f490ea3SStefano Zampini Collective 1943273d9f13SBarry Smith 1944273d9f13SBarry Smith Input Parameters: 19451c4f3114SJed Brown . B - the matrix 19460298fd71SBarry Smith - data - optional location of matrix data. Set data=NULL for PETSc 1947273d9f13SBarry Smith to control all matrix memory allocation. 1948273d9f13SBarry Smith 1949273d9f13SBarry Smith Notes: 1950273d9f13SBarry Smith The dense format is fully compatible with standard Fortran 77 1951273d9f13SBarry Smith storage by columns. 1952273d9f13SBarry Smith 1953273d9f13SBarry Smith The data input variable is intended primarily for Fortran programmers 1954273d9f13SBarry Smith who wish to allocate their own matrix memory space. Most users should 19550298fd71SBarry Smith set data=NULL. 1956273d9f13SBarry Smith 1957273d9f13SBarry Smith Level: intermediate 1958273d9f13SBarry Smith 1959db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 1960273d9f13SBarry Smith @*/ 19619371c9d4SSatish Balay PetscErrorCode MatMPIDenseSetPreallocation(Mat B, PetscScalar *data) { 1962273d9f13SBarry Smith PetscFunctionBegin; 1963d5ea218eSStefano Zampini PetscValidHeaderSpecific(B, MAT_CLASSID, 1); 1964cac4c232SBarry Smith PetscTryMethod(B, "MatMPIDenseSetPreallocation_C", (Mat, PetscScalar *), (B, data)); 1965273d9f13SBarry Smith PetscFunctionReturn(0); 1966273d9f13SBarry Smith } 1967273d9f13SBarry Smith 1968d3042a70SBarry Smith /*@ 1969637a0070SStefano Zampini MatDensePlaceArray - Allows one to replace the array in a dense matrix with an 1970d3042a70SBarry Smith array provided by the user. This is useful to avoid copying an array 1971d3042a70SBarry Smith into a matrix 1972d3042a70SBarry Smith 1973d3042a70SBarry Smith Not Collective 1974d3042a70SBarry Smith 1975d3042a70SBarry Smith Input Parameters: 1976d3042a70SBarry Smith + mat - the matrix 1977d3042a70SBarry Smith - array - the array in column major order 1978d3042a70SBarry Smith 1979d3042a70SBarry Smith Notes: 1980d3042a70SBarry Smith You can return to the original array with a call to MatDenseResetArray(). The user is responsible for freeing this array; it will not be 1981d3042a70SBarry Smith freed when the matrix is destroyed. 1982d3042a70SBarry Smith 1983d3042a70SBarry Smith Level: developer 1984d3042a70SBarry Smith 1985db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()` 1986d3042a70SBarry Smith 1987d3042a70SBarry Smith @*/ 19889371c9d4SSatish Balay PetscErrorCode MatDensePlaceArray(Mat mat, const PetscScalar *array) { 1989d3042a70SBarry Smith PetscFunctionBegin; 1990d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1991cac4c232SBarry Smith PetscUseMethod(mat, "MatDensePlaceArray_C", (Mat, const PetscScalar *), (mat, array)); 19929566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 1993637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 1994637a0070SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1995637a0070SStefano Zampini #endif 1996d3042a70SBarry Smith PetscFunctionReturn(0); 1997d3042a70SBarry Smith } 1998d3042a70SBarry Smith 1999d3042a70SBarry Smith /*@ 2000d3042a70SBarry Smith MatDenseResetArray - Resets the matrix array to that it previously had before the call to MatDensePlaceArray() 2001d3042a70SBarry Smith 2002d3042a70SBarry Smith Not Collective 2003d3042a70SBarry Smith 2004d3042a70SBarry Smith Input Parameters: 2005d3042a70SBarry Smith . mat - the matrix 2006d3042a70SBarry Smith 2007d3042a70SBarry Smith Notes: 2008d3042a70SBarry Smith You can only call this after a call to MatDensePlaceArray() 2009d3042a70SBarry Smith 2010d3042a70SBarry Smith Level: developer 2011d3042a70SBarry Smith 2012db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()` 2013d3042a70SBarry Smith 2014d3042a70SBarry Smith @*/ 20159371c9d4SSatish Balay PetscErrorCode MatDenseResetArray(Mat mat) { 2016d3042a70SBarry Smith PetscFunctionBegin; 2017d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 2018cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseResetArray_C", (Mat), (mat)); 20199566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 2020d3042a70SBarry Smith PetscFunctionReturn(0); 2021d3042a70SBarry Smith } 2022d3042a70SBarry Smith 2023d5ea218eSStefano Zampini /*@ 2024d5ea218eSStefano Zampini MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an 2025d5ea218eSStefano Zampini array provided by the user. This is useful to avoid copying an array 2026d5ea218eSStefano Zampini into a matrix 2027d5ea218eSStefano Zampini 2028d5ea218eSStefano Zampini Not Collective 2029d5ea218eSStefano Zampini 2030d5ea218eSStefano Zampini Input Parameters: 2031d5ea218eSStefano Zampini + mat - the matrix 2032d5ea218eSStefano Zampini - array - the array in column major order 2033d5ea218eSStefano Zampini 2034d5ea218eSStefano Zampini Notes: 2035d5ea218eSStefano Zampini The memory passed in MUST be obtained with PetscMalloc() and CANNOT be 2036d5ea218eSStefano Zampini freed by the user. It will be freed when the matrix is destroyed. 2037d5ea218eSStefano Zampini 2038d5ea218eSStefano Zampini Level: developer 2039d5ea218eSStefano Zampini 2040db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `VecReplaceArray()` 2041d5ea218eSStefano Zampini @*/ 20429371c9d4SSatish Balay PetscErrorCode MatDenseReplaceArray(Mat mat, const PetscScalar *array) { 2043d5ea218eSStefano Zampini PetscFunctionBegin; 2044d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 2045cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseReplaceArray_C", (Mat, const PetscScalar *), (mat, array)); 20469566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 2047d5ea218eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 2048d5ea218eSStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 2049d5ea218eSStefano Zampini #endif 2050d5ea218eSStefano Zampini PetscFunctionReturn(0); 2051d5ea218eSStefano Zampini } 2052d5ea218eSStefano Zampini 2053637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 20548965ea79SLois Curfman McInnes /*@C 2055637a0070SStefano Zampini MatDenseCUDAPlaceArray - Allows one to replace the GPU array in a dense matrix with an 2056637a0070SStefano Zampini array provided by the user. This is useful to avoid copying an array 2057637a0070SStefano Zampini into a matrix 2058637a0070SStefano Zampini 2059637a0070SStefano Zampini Not Collective 2060637a0070SStefano Zampini 2061637a0070SStefano Zampini Input Parameters: 2062637a0070SStefano Zampini + mat - the matrix 2063637a0070SStefano Zampini - array - the array in column major order 2064637a0070SStefano Zampini 2065637a0070SStefano Zampini Notes: 2066637a0070SStefano Zampini You can return to the original array with a call to MatDenseCUDAResetArray(). The user is responsible for freeing this array; it will not be 2067637a0070SStefano Zampini freed when the matrix is destroyed. The array must have been allocated with cudaMalloc(). 2068637a0070SStefano Zampini 2069637a0070SStefano Zampini Level: developer 2070637a0070SStefano Zampini 2071db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAResetArray()` 2072637a0070SStefano Zampini @*/ 20739371c9d4SSatish Balay PetscErrorCode MatDenseCUDAPlaceArray(Mat mat, const PetscScalar *array) { 2074637a0070SStefano Zampini PetscFunctionBegin; 2075d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 2076cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseCUDAPlaceArray_C", (Mat, const PetscScalar *), (mat, array)); 20779566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 2078637a0070SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_GPU; 2079637a0070SStefano Zampini PetscFunctionReturn(0); 2080637a0070SStefano Zampini } 2081637a0070SStefano Zampini 2082637a0070SStefano Zampini /*@C 2083637a0070SStefano Zampini MatDenseCUDAResetArray - Resets the matrix array to that it previously had before the call to MatDenseCUDAPlaceArray() 2084637a0070SStefano Zampini 2085637a0070SStefano Zampini Not Collective 2086637a0070SStefano Zampini 2087637a0070SStefano Zampini Input Parameters: 2088637a0070SStefano Zampini . mat - the matrix 2089637a0070SStefano Zampini 2090637a0070SStefano Zampini Notes: 2091637a0070SStefano Zampini You can only call this after a call to MatDenseCUDAPlaceArray() 2092637a0070SStefano Zampini 2093637a0070SStefano Zampini Level: developer 2094637a0070SStefano Zampini 2095db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAPlaceArray()` 2096637a0070SStefano Zampini 2097637a0070SStefano Zampini @*/ 20989371c9d4SSatish Balay PetscErrorCode MatDenseCUDAResetArray(Mat mat) { 2099637a0070SStefano Zampini PetscFunctionBegin; 2100d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 2101cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseCUDAResetArray_C", (Mat), (mat)); 21029566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 2103637a0070SStefano Zampini PetscFunctionReturn(0); 2104637a0070SStefano Zampini } 2105637a0070SStefano Zampini 2106637a0070SStefano Zampini /*@C 2107d5ea218eSStefano Zampini MatDenseCUDAReplaceArray - Allows one to replace the GPU array in a dense matrix with an 2108d5ea218eSStefano Zampini array provided by the user. This is useful to avoid copying an array 2109d5ea218eSStefano Zampini into a matrix 2110d5ea218eSStefano Zampini 2111d5ea218eSStefano Zampini Not Collective 2112d5ea218eSStefano Zampini 2113d5ea218eSStefano Zampini Input Parameters: 2114d5ea218eSStefano Zampini + mat - the matrix 2115d5ea218eSStefano Zampini - array - the array in column major order 2116d5ea218eSStefano Zampini 2117d5ea218eSStefano Zampini Notes: 2118d5ea218eSStefano Zampini This permanently replaces the GPU array and frees the memory associated with the old GPU array. 2119d5ea218eSStefano Zampini The memory passed in CANNOT be freed by the user. It will be freed 2120d5ea218eSStefano Zampini when the matrix is destroyed. The array should respect the matrix leading dimension. 2121d5ea218eSStefano Zampini 2122d5ea218eSStefano Zampini Level: developer 2123d5ea218eSStefano Zampini 2124db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAPlaceArray()`, `MatDenseCUDAResetArray()` 2125d5ea218eSStefano Zampini @*/ 21269371c9d4SSatish Balay PetscErrorCode MatDenseCUDAReplaceArray(Mat mat, const PetscScalar *array) { 2127d5ea218eSStefano Zampini PetscFunctionBegin; 2128d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 2129cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseCUDAReplaceArray_C", (Mat, const PetscScalar *), (mat, array)); 21309566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 2131d5ea218eSStefano Zampini mat->offloadmask = PETSC_OFFLOAD_GPU; 2132d5ea218eSStefano Zampini PetscFunctionReturn(0); 2133d5ea218eSStefano Zampini } 2134d5ea218eSStefano Zampini 2135d5ea218eSStefano Zampini /*@C 2136637a0070SStefano Zampini MatDenseCUDAGetArrayWrite - Provides write access to the CUDA buffer inside a dense matrix. 2137637a0070SStefano Zampini 2138637a0070SStefano Zampini Not Collective 2139637a0070SStefano Zampini 2140637a0070SStefano Zampini Input Parameters: 2141637a0070SStefano Zampini . A - the matrix 2142637a0070SStefano Zampini 2143637a0070SStefano Zampini Output Parameters 2144637a0070SStefano Zampini . array - the GPU array in column major order 2145637a0070SStefano Zampini 2146637a0070SStefano Zampini Notes: 2147637a0070SStefano Zampini The data on the GPU may not be updated due to operations done on the CPU. If you need updated data, use MatDenseCUDAGetArray(). The array must be restored with MatDenseCUDARestoreArrayWrite() when no longer needed. 2148637a0070SStefano Zampini 2149637a0070SStefano Zampini Level: developer 2150637a0070SStefano Zampini 2151db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayRead()`, `MatDenseCUDARestoreArrayRead()` 2152637a0070SStefano Zampini @*/ 21539371c9d4SSatish Balay PetscErrorCode MatDenseCUDAGetArrayWrite(Mat A, PetscScalar **a) { 2154637a0070SStefano Zampini PetscFunctionBegin; 2155d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 2156cac4c232SBarry Smith PetscUseMethod(A, "MatDenseCUDAGetArrayWrite_C", (Mat, PetscScalar **), (A, a)); 21579566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 2158637a0070SStefano Zampini PetscFunctionReturn(0); 2159637a0070SStefano Zampini } 2160637a0070SStefano Zampini 2161637a0070SStefano Zampini /*@C 2162637a0070SStefano Zampini MatDenseCUDARestoreArrayWrite - Restore write access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArrayWrite(). 2163637a0070SStefano Zampini 2164637a0070SStefano Zampini Not Collective 2165637a0070SStefano Zampini 2166637a0070SStefano Zampini Input Parameters: 2167637a0070SStefano Zampini + A - the matrix 2168637a0070SStefano Zampini - array - the GPU array in column major order 2169637a0070SStefano Zampini 2170637a0070SStefano Zampini Notes: 2171637a0070SStefano Zampini 2172637a0070SStefano Zampini Level: developer 2173637a0070SStefano Zampini 2174db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`, `MatDenseCUDAGetArrayRead()` 2175637a0070SStefano Zampini @*/ 21769371c9d4SSatish Balay PetscErrorCode MatDenseCUDARestoreArrayWrite(Mat A, PetscScalar **a) { 2177637a0070SStefano Zampini PetscFunctionBegin; 2178d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 2179cac4c232SBarry Smith PetscUseMethod(A, "MatDenseCUDARestoreArrayWrite_C", (Mat, PetscScalar **), (A, a)); 21809566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 2181637a0070SStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 2182637a0070SStefano Zampini PetscFunctionReturn(0); 2183637a0070SStefano Zampini } 2184637a0070SStefano Zampini 2185637a0070SStefano Zampini /*@C 2186637a0070SStefano Zampini MatDenseCUDAGetArrayRead - Provides read-only access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArrayRead() when no longer needed. 2187637a0070SStefano Zampini 2188637a0070SStefano Zampini Not Collective 2189637a0070SStefano Zampini 2190637a0070SStefano Zampini Input Parameters: 2191637a0070SStefano Zampini . A - the matrix 2192637a0070SStefano Zampini 2193637a0070SStefano Zampini Output Parameters 2194637a0070SStefano Zampini . array - the GPU array in column major order 2195637a0070SStefano Zampini 2196637a0070SStefano Zampini Notes: 2197637a0070SStefano Zampini Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite(). 2198637a0070SStefano Zampini 2199637a0070SStefano Zampini Level: developer 2200637a0070SStefano Zampini 2201db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()` 2202637a0070SStefano Zampini @*/ 22039371c9d4SSatish Balay PetscErrorCode MatDenseCUDAGetArrayRead(Mat A, const PetscScalar **a) { 2204637a0070SStefano Zampini PetscFunctionBegin; 2205d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 2206cac4c232SBarry Smith PetscUseMethod(A, "MatDenseCUDAGetArrayRead_C", (Mat, const PetscScalar **), (A, a)); 2207637a0070SStefano Zampini PetscFunctionReturn(0); 2208637a0070SStefano Zampini } 2209637a0070SStefano Zampini 2210637a0070SStefano Zampini /*@C 2211637a0070SStefano Zampini MatDenseCUDARestoreArrayRead - Restore read-only access to the CUDA buffer inside a dense matrix previously obtained with a call to MatDenseCUDAGetArrayRead(). 2212637a0070SStefano Zampini 2213637a0070SStefano Zampini Not Collective 2214637a0070SStefano Zampini 2215637a0070SStefano Zampini Input Parameters: 2216637a0070SStefano Zampini + A - the matrix 2217637a0070SStefano Zampini - array - the GPU array in column major order 2218637a0070SStefano Zampini 2219637a0070SStefano Zampini Notes: 2220637a0070SStefano Zampini Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite(). 2221637a0070SStefano Zampini 2222637a0070SStefano Zampini Level: developer 2223637a0070SStefano Zampini 2224db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDAGetArrayRead()` 2225637a0070SStefano Zampini @*/ 22269371c9d4SSatish Balay PetscErrorCode MatDenseCUDARestoreArrayRead(Mat A, const PetscScalar **a) { 2227637a0070SStefano Zampini PetscFunctionBegin; 2228cac4c232SBarry Smith PetscUseMethod(A, "MatDenseCUDARestoreArrayRead_C", (Mat, const PetscScalar **), (A, a)); 2229637a0070SStefano Zampini PetscFunctionReturn(0); 2230637a0070SStefano Zampini } 2231637a0070SStefano Zampini 2232637a0070SStefano Zampini /*@C 2233637a0070SStefano Zampini MatDenseCUDAGetArray - Provides access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArray() when no longer needed. 2234637a0070SStefano Zampini 2235637a0070SStefano Zampini Not Collective 2236637a0070SStefano Zampini 2237637a0070SStefano Zampini Input Parameters: 2238637a0070SStefano Zampini . A - the matrix 2239637a0070SStefano Zampini 2240637a0070SStefano Zampini Output Parameters 2241637a0070SStefano Zampini . array - the GPU array in column major order 2242637a0070SStefano Zampini 2243637a0070SStefano Zampini Notes: 2244637a0070SStefano Zampini Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite(). For read-only access, use MatDenseCUDAGetArrayRead(). 2245637a0070SStefano Zampini 2246637a0070SStefano Zampini Level: developer 2247637a0070SStefano Zampini 2248db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArrayRead()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()` 2249637a0070SStefano Zampini @*/ 22509371c9d4SSatish Balay PetscErrorCode MatDenseCUDAGetArray(Mat A, PetscScalar **a) { 2251637a0070SStefano Zampini PetscFunctionBegin; 2252d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 2253cac4c232SBarry Smith PetscUseMethod(A, "MatDenseCUDAGetArray_C", (Mat, PetscScalar **), (A, a)); 22549566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 2255637a0070SStefano Zampini PetscFunctionReturn(0); 2256637a0070SStefano Zampini } 2257637a0070SStefano Zampini 2258637a0070SStefano Zampini /*@C 2259637a0070SStefano Zampini MatDenseCUDARestoreArray - Restore access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArray(). 2260637a0070SStefano Zampini 2261637a0070SStefano Zampini Not Collective 2262637a0070SStefano Zampini 2263637a0070SStefano Zampini Input Parameters: 2264637a0070SStefano Zampini + A - the matrix 2265637a0070SStefano Zampini - array - the GPU array in column major order 2266637a0070SStefano Zampini 2267637a0070SStefano Zampini Notes: 2268637a0070SStefano Zampini 2269637a0070SStefano Zampini Level: developer 2270637a0070SStefano Zampini 2271db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`, `MatDenseCUDAGetArrayRead()` 2272637a0070SStefano Zampini @*/ 22739371c9d4SSatish Balay PetscErrorCode MatDenseCUDARestoreArray(Mat A, PetscScalar **a) { 2274637a0070SStefano Zampini PetscFunctionBegin; 2275d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 2276cac4c232SBarry Smith PetscUseMethod(A, "MatDenseCUDARestoreArray_C", (Mat, PetscScalar **), (A, a)); 22779566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)A)); 2278637a0070SStefano Zampini A->offloadmask = PETSC_OFFLOAD_GPU; 2279637a0070SStefano Zampini PetscFunctionReturn(0); 2280637a0070SStefano Zampini } 2281637a0070SStefano Zampini #endif 2282637a0070SStefano Zampini 2283637a0070SStefano Zampini /*@C 2284637a0070SStefano Zampini MatCreateDense - Creates a matrix in dense format. 22858965ea79SLois Curfman McInnes 2286d083f849SBarry Smith Collective 2287db81eaa0SLois Curfman McInnes 22888965ea79SLois Curfman McInnes Input Parameters: 2289db81eaa0SLois Curfman McInnes + comm - MPI communicator 22908965ea79SLois Curfman McInnes . m - number of local rows (or PETSC_DECIDE to have calculated if M is given) 2291db81eaa0SLois Curfman McInnes . n - number of local columns (or PETSC_DECIDE to have calculated if N is given) 22928965ea79SLois Curfman McInnes . M - number of global rows (or PETSC_DECIDE to have calculated if m is given) 2293db81eaa0SLois Curfman McInnes . N - number of global columns (or PETSC_DECIDE to have calculated if n is given) 22946cfe35ddSJose E. Roman - data - optional location of matrix data. Set data=NULL (PETSC_NULL_SCALAR for Fortran users) for PETSc 2295dfc5480cSLois Curfman McInnes to control all matrix memory allocation. 22968965ea79SLois Curfman McInnes 22978965ea79SLois Curfman McInnes Output Parameter: 2298477f1c0bSLois Curfman McInnes . A - the matrix 22998965ea79SLois Curfman McInnes 2300b259b22eSLois Curfman McInnes Notes: 230139ddd567SLois Curfman McInnes The dense format is fully compatible with standard Fortran 77 230239ddd567SLois Curfman McInnes storage by columns. 2303002bc6daSRichard Tran Mills Note that, although local portions of the matrix are stored in column-major 2304002bc6daSRichard Tran Mills order, the matrix is partitioned across MPI ranks by row. 23058965ea79SLois Curfman McInnes 230618f449edSLois Curfman McInnes The data input variable is intended primarily for Fortran programmers 230718f449edSLois Curfman McInnes who wish to allocate their own matrix memory space. Most users should 23086cfe35ddSJose E. Roman set data=NULL (PETSC_NULL_SCALAR for Fortran users). 230918f449edSLois Curfman McInnes 23108965ea79SLois Curfman McInnes The user MUST specify either the local or global matrix dimensions 23118965ea79SLois Curfman McInnes (possibly both). 23128965ea79SLois Curfman McInnes 2313027ccd11SLois Curfman McInnes Level: intermediate 2314027ccd11SLois Curfman McInnes 2315db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 23168965ea79SLois Curfman McInnes @*/ 23179371c9d4SSatish Balay PetscErrorCode MatCreateDense(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar *data, Mat *A) { 23183a40ed3dSBarry Smith PetscFunctionBegin; 23199566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 23209566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, M, N)); 23216f08ad05SPierre Jolivet PetscCall(MatSetType(*A, MATDENSE)); 23229566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(*A, data)); 23236f08ad05SPierre Jolivet PetscCall(MatMPIDenseSetPreallocation(*A, data)); 23243a40ed3dSBarry Smith PetscFunctionReturn(0); 23258965ea79SLois Curfman McInnes } 23268965ea79SLois Curfman McInnes 2327637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 2328637a0070SStefano Zampini /*@C 2329637a0070SStefano Zampini MatCreateDenseCUDA - Creates a matrix in dense format using CUDA. 2330637a0070SStefano Zampini 2331637a0070SStefano Zampini Collective 2332637a0070SStefano Zampini 2333637a0070SStefano Zampini Input Parameters: 2334637a0070SStefano Zampini + comm - MPI communicator 2335637a0070SStefano Zampini . m - number of local rows (or PETSC_DECIDE to have calculated if M is given) 2336637a0070SStefano Zampini . n - number of local columns (or PETSC_DECIDE to have calculated if N is given) 2337637a0070SStefano Zampini . M - number of global rows (or PETSC_DECIDE to have calculated if m is given) 2338637a0070SStefano Zampini . N - number of global columns (or PETSC_DECIDE to have calculated if n is given) 2339637a0070SStefano Zampini - data - optional location of GPU matrix data. Set data=NULL for PETSc 2340637a0070SStefano Zampini to control matrix memory allocation. 2341637a0070SStefano Zampini 2342637a0070SStefano Zampini Output Parameter: 2343637a0070SStefano Zampini . A - the matrix 2344637a0070SStefano Zampini 2345637a0070SStefano Zampini Notes: 2346637a0070SStefano Zampini 2347637a0070SStefano Zampini Level: intermediate 2348637a0070SStefano Zampini 2349db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateDense()` 2350637a0070SStefano Zampini @*/ 23519371c9d4SSatish Balay PetscErrorCode MatCreateDenseCUDA(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar *data, Mat *A) { 2352637a0070SStefano Zampini PetscFunctionBegin; 23539566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 2354637a0070SStefano Zampini PetscValidLogicalCollectiveBool(*A, !!data, 6); 23559566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, M, N)); 23566f08ad05SPierre Jolivet PetscCall(MatSetType(*A, MATDENSECUDA)); 23579566063dSJacob Faibussowitsch PetscCall(MatSeqDenseCUDASetPreallocation(*A, data)); 23586f08ad05SPierre Jolivet PetscCall(MatMPIDenseCUDASetPreallocation(*A, data)); 2359637a0070SStefano Zampini PetscFunctionReturn(0); 2360637a0070SStefano Zampini } 2361637a0070SStefano Zampini #endif 2362637a0070SStefano Zampini 23639371c9d4SSatish Balay static PetscErrorCode MatDuplicate_MPIDense(Mat A, MatDuplicateOption cpvalues, Mat *newmat) { 23648965ea79SLois Curfman McInnes Mat mat; 23653501a2bdSLois Curfman McInnes Mat_MPIDense *a, *oldmat = (Mat_MPIDense *)A->data; 23668965ea79SLois Curfman McInnes 23673a40ed3dSBarry Smith PetscFunctionBegin; 2368f4259b30SLisandro Dalcin *newmat = NULL; 23699566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat)); 23709566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 23719566063dSJacob Faibussowitsch PetscCall(MatSetType(mat, ((PetscObject)A)->type_name)); 2372834f8fabSBarry Smith a = (Mat_MPIDense *)mat->data; 23735aa7edbeSHong Zhang 2374d5f3da31SBarry Smith mat->factortype = A->factortype; 2375c456f294SBarry Smith mat->assembled = PETSC_TRUE; 2376273d9f13SBarry Smith mat->preallocated = PETSC_TRUE; 23778965ea79SLois Curfman McInnes 2378e0fa3b82SLois Curfman McInnes mat->insertmode = NOT_SET_VALUES; 23793782ba37SSatish Balay a->donotstash = oldmat->donotstash; 2380e04c1aa4SHong Zhang 23819566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->rmap, &mat->rmap)); 23829566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->cmap, &mat->cmap)); 23838965ea79SLois Curfman McInnes 23849566063dSJacob Faibussowitsch PetscCall(MatDuplicate(oldmat->A, cpvalues, &a->A)); 23859566063dSJacob Faibussowitsch PetscCall(PetscLogObjectParent((PetscObject)mat, (PetscObject)a->A)); 238601b82886SBarry Smith 23878965ea79SLois Curfman McInnes *newmat = mat; 23883a40ed3dSBarry Smith PetscFunctionReturn(0); 23898965ea79SLois Curfman McInnes } 23908965ea79SLois Curfman McInnes 23919371c9d4SSatish Balay PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer) { 239287d5ce66SSatish Balay PetscBool isbinary; 239387d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 239487d5ce66SSatish Balay PetscBool ishdf5; 239587d5ce66SSatish Balay #endif 2396eb91f321SVaclav Hapla 2397eb91f321SVaclav Hapla PetscFunctionBegin; 2398eb91f321SVaclav Hapla PetscValidHeaderSpecific(newMat, MAT_CLASSID, 1); 2399eb91f321SVaclav Hapla PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 2400eb91f321SVaclav Hapla /* force binary viewer to load .info file if it has not yet done so */ 24019566063dSJacob Faibussowitsch PetscCall(PetscViewerSetUp(viewer)); 24029566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 240387d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 24049566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERHDF5, &ishdf5)); 240587d5ce66SSatish Balay #endif 2406eb91f321SVaclav Hapla if (isbinary) { 24079566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_Binary(newMat, viewer)); 2408eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5) 240987d5ce66SSatish Balay } else if (ishdf5) { 24109566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_HDF5(newMat, viewer)); 2411eb91f321SVaclav Hapla #endif 241298921bdaSJacob Faibussowitsch } else SETERRQ(PetscObjectComm((PetscObject)newMat), PETSC_ERR_SUP, "Viewer type %s not yet supported for reading %s matrices", ((PetscObject)viewer)->type_name, ((PetscObject)newMat)->type_name); 2413eb91f321SVaclav Hapla PetscFunctionReturn(0); 2414eb91f321SVaclav Hapla } 2415eb91f321SVaclav Hapla 24169371c9d4SSatish Balay static PetscErrorCode MatEqual_MPIDense(Mat A, Mat B, PetscBool *flag) { 24176e4ee0c6SHong Zhang Mat_MPIDense *matB = (Mat_MPIDense *)B->data, *matA = (Mat_MPIDense *)A->data; 24186e4ee0c6SHong Zhang Mat a, b; 241990ace30eSBarry Smith 24206e4ee0c6SHong Zhang PetscFunctionBegin; 24216e4ee0c6SHong Zhang a = matA->A; 24226e4ee0c6SHong Zhang b = matB->A; 24232cf15c64SPierre Jolivet PetscCall(MatEqual(a, b, flag)); 24242cf15c64SPierre Jolivet PetscCall(MPIU_Allreduce(MPI_IN_PLACE, flag, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 24256e4ee0c6SHong Zhang PetscFunctionReturn(0); 24266e4ee0c6SHong Zhang } 242790ace30eSBarry Smith 24289371c9d4SSatish Balay PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data) { 24296718818eSStefano Zampini Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data; 2430baa3c1c6SHong Zhang 2431baa3c1c6SHong Zhang PetscFunctionBegin; 24329566063dSJacob Faibussowitsch PetscCall(PetscFree2(atb->sendbuf, atb->recvcounts)); 24339566063dSJacob Faibussowitsch PetscCall(MatDestroy(&atb->atb)); 24349566063dSJacob Faibussowitsch PetscCall(PetscFree(atb)); 2435baa3c1c6SHong Zhang PetscFunctionReturn(0); 2436baa3c1c6SHong Zhang } 2437baa3c1c6SHong Zhang 24389371c9d4SSatish Balay PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data) { 24396718818eSStefano Zampini Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data; 2440cc48ffa7SToby Isaac 2441cc48ffa7SToby Isaac PetscFunctionBegin; 24429566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->buf[0], abt->buf[1])); 24439566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->recvcounts, abt->recvdispls)); 24449566063dSJacob Faibussowitsch PetscCall(PetscFree(abt)); 2445cc48ffa7SToby Isaac PetscFunctionReturn(0); 2446cc48ffa7SToby Isaac } 2447cc48ffa7SToby Isaac 24489371c9d4SSatish Balay static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) { 2449baa3c1c6SHong Zhang Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 24506718818eSStefano Zampini Mat_TransMatMultDense *atb; 2451cb20be35SHong Zhang MPI_Comm comm; 24526718818eSStefano Zampini PetscMPIInt size, *recvcounts; 24536718818eSStefano Zampini PetscScalar *carray, *sendbuf; 2454637a0070SStefano Zampini const PetscScalar *atbarray; 2455a1f9a5e6SStefano Zampini PetscInt i, cN = C->cmap->N, proc, k, j, lda; 2456e68c0b26SHong Zhang const PetscInt *ranges; 2457cb20be35SHong Zhang 2458cb20be35SHong Zhang PetscFunctionBegin; 24596718818eSStefano Zampini MatCheckProduct(C, 3); 24605f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 24616718818eSStefano Zampini atb = (Mat_TransMatMultDense *)C->product->data; 24626718818eSStefano Zampini recvcounts = atb->recvcounts; 24636718818eSStefano Zampini sendbuf = atb->sendbuf; 24646718818eSStefano Zampini 24659566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 24669566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 2467e68c0b26SHong Zhang 2468c5ef1628SHong Zhang /* compute atbarray = aseq^T * bseq */ 24699566063dSJacob Faibussowitsch PetscCall(MatTransposeMatMult(a->A, b->A, atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX, PETSC_DEFAULT, &atb->atb)); 2470cb20be35SHong Zhang 24719566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 2472cb20be35SHong Zhang 2473660d5466SHong Zhang /* arrange atbarray into sendbuf */ 24749566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(atb->atb, &atbarray)); 24759566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(atb->atb, &lda)); 2476637a0070SStefano Zampini for (proc = 0, k = 0; proc < size; proc++) { 2477baa3c1c6SHong Zhang for (j = 0; j < cN; j++) { 2478a1f9a5e6SStefano Zampini for (i = ranges[proc]; i < ranges[proc + 1]; i++) sendbuf[k++] = atbarray[i + j * lda]; 2479cb20be35SHong Zhang } 2480cb20be35SHong Zhang } 24819566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(atb->atb, &atbarray)); 2482637a0070SStefano Zampini 2483c5ef1628SHong Zhang /* sum all atbarray to local values of C */ 24849566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &carray)); 24859566063dSJacob Faibussowitsch PetscCallMPI(MPI_Reduce_scatter(sendbuf, carray, recvcounts, MPIU_SCALAR, MPIU_SUM, comm)); 24869566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &carray)); 24879566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 24889566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 2489cb20be35SHong Zhang PetscFunctionReturn(0); 2490cb20be35SHong Zhang } 2491cb20be35SHong Zhang 24929371c9d4SSatish Balay static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) { 2493cb20be35SHong Zhang MPI_Comm comm; 2494baa3c1c6SHong Zhang PetscMPIInt size; 2495660d5466SHong Zhang PetscInt cm = A->cmap->n, cM, cN = B->cmap->N; 2496baa3c1c6SHong Zhang Mat_TransMatMultDense *atb; 24976718818eSStefano Zampini PetscBool cisdense; 24980acaeb71SStefano Zampini PetscInt i; 24990acaeb71SStefano Zampini const PetscInt *ranges; 2500cb20be35SHong Zhang 2501cb20be35SHong Zhang PetscFunctionBegin; 2502*8f83a4d9SJacob Faibussowitsch MatCheckProduct(C, 4); 25035f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 25049566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 2505cb20be35SHong Zhang if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) { 250698921bdaSJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2507cb20be35SHong Zhang } 2508cb20be35SHong Zhang 25094222ddf1SHong Zhang /* create matrix product C */ 25109566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, cm, B->cmap->n, A->cmap->N, B->cmap->N)); 25119566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSECUDA, "")); 251248a46eb9SPierre Jolivet if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)A)->type_name)); 25139566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2514baa3c1c6SHong Zhang 25154222ddf1SHong Zhang /* create data structure for reuse C */ 25169566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 25179566063dSJacob Faibussowitsch PetscCall(PetscNew(&atb)); 25184222ddf1SHong Zhang cM = C->rmap->N; 25199566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(cM * cN, &atb->sendbuf, size, &atb->recvcounts)); 25209566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 25210acaeb71SStefano Zampini for (i = 0; i < size; i++) atb->recvcounts[i] = (ranges[i + 1] - ranges[i]) * cN; 2522baa3c1c6SHong Zhang 25236718818eSStefano Zampini C->product->data = atb; 25246718818eSStefano Zampini C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense; 2525cb20be35SHong Zhang PetscFunctionReturn(0); 2526cb20be35SHong Zhang } 2527cb20be35SHong Zhang 25289371c9d4SSatish Balay static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) { 2529cc48ffa7SToby Isaac MPI_Comm comm; 2530cc48ffa7SToby Isaac PetscMPIInt i, size; 2531cc48ffa7SToby Isaac PetscInt maxRows, bufsiz; 2532cc48ffa7SToby Isaac PetscMPIInt tag; 25334222ddf1SHong Zhang PetscInt alg; 2534cc48ffa7SToby Isaac Mat_MatTransMultDense *abt; 25354222ddf1SHong Zhang Mat_Product *product = C->product; 25364222ddf1SHong Zhang PetscBool flg; 2537cc48ffa7SToby Isaac 2538cc48ffa7SToby Isaac PetscFunctionBegin; 25396718818eSStefano Zampini MatCheckProduct(C, 4); 25405f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 25414222ddf1SHong Zhang /* check local size of A and B */ 25425f80ce2aSJacob Faibussowitsch PetscCheck(A->cmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")", A->cmap->n, B->cmap->n); 2543cc48ffa7SToby Isaac 25449566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "allgatherv", &flg)); 2545637a0070SStefano Zampini alg = flg ? 0 : 1; 2546cc48ffa7SToby Isaac 25474222ddf1SHong Zhang /* setup matrix product C */ 25489566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, A->rmap->n, B->rmap->n, A->rmap->N, B->rmap->N)); 25499566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATMPIDENSE)); 25509566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 25519566063dSJacob Faibussowitsch PetscCall(PetscObjectGetNewTag((PetscObject)C, &tag)); 25524222ddf1SHong Zhang 25534222ddf1SHong Zhang /* create data structure for reuse C */ 25549566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 25559566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 25569566063dSJacob Faibussowitsch PetscCall(PetscNew(&abt)); 2557cc48ffa7SToby Isaac abt->tag = tag; 2558faa55883SToby Isaac abt->alg = alg; 2559faa55883SToby Isaac switch (alg) { 25604222ddf1SHong Zhang case 1: /* alg: "cyclic" */ 2561cc48ffa7SToby Isaac for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i])); 2562cc48ffa7SToby Isaac bufsiz = A->cmap->N * maxRows; 25639566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(bufsiz, &(abt->buf[0]), bufsiz, &(abt->buf[1]))); 2564faa55883SToby Isaac break; 25654222ddf1SHong Zhang default: /* alg: "allgatherv" */ 25669566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &(abt->buf[0]), B->rmap->N * B->cmap->N, &(abt->buf[1]))); 25679566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(size, &(abt->recvcounts), size + 1, &(abt->recvdispls))); 2568faa55883SToby Isaac for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N; 2569faa55883SToby Isaac for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i]; 2570faa55883SToby Isaac break; 2571faa55883SToby Isaac } 2572cc48ffa7SToby Isaac 25736718818eSStefano Zampini C->product->data = abt; 25746718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense; 25754222ddf1SHong Zhang C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense; 2576cc48ffa7SToby Isaac PetscFunctionReturn(0); 2577cc48ffa7SToby Isaac } 2578cc48ffa7SToby Isaac 25799371c9d4SSatish Balay static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C) { 2580cc48ffa7SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 25816718818eSStefano Zampini Mat_MatTransMultDense *abt; 2582cc48ffa7SToby Isaac MPI_Comm comm; 2583cc48ffa7SToby Isaac PetscMPIInt rank, size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom; 2584f4259b30SLisandro Dalcin PetscScalar *sendbuf, *recvbuf = NULL, *cv; 2585cc48ffa7SToby Isaac PetscInt i, cK = A->cmap->N, k, j, bn; 2586cc48ffa7SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2587637a0070SStefano Zampini const PetscScalar *av, *bv; 258823fff9afSBarry Smith PetscBLASInt cm, cn, ck, alda, blda = 0, clda; 2589cc48ffa7SToby Isaac MPI_Request reqs[2]; 2590cc48ffa7SToby Isaac const PetscInt *ranges; 2591cc48ffa7SToby Isaac 2592cc48ffa7SToby Isaac PetscFunctionBegin; 25936718818eSStefano Zampini MatCheckProduct(C, 3); 25945f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 25956718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 25969566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 25979566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 25989566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 25999566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 26009566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 26019566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 26029566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 26039566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 26049566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &i)); 26059566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &blda)); 26069566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 26079566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 26089566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(B, &ranges)); 2609cc48ffa7SToby Isaac bn = B->rmap->n; 2610637a0070SStefano Zampini if (blda == bn) { 2611637a0070SStefano Zampini sendbuf = (PetscScalar *)bv; 2612cc48ffa7SToby Isaac } else { 2613cc48ffa7SToby Isaac sendbuf = abt->buf[0]; 2614cc48ffa7SToby Isaac for (k = 0, i = 0; i < cK; i++) { 2615ad540459SPierre Jolivet for (j = 0; j < bn; j++, k++) sendbuf[k] = bv[i * blda + j]; 2616cc48ffa7SToby Isaac } 2617cc48ffa7SToby Isaac } 2618cc48ffa7SToby Isaac if (size > 1) { 2619cc48ffa7SToby Isaac sendto = (rank + size - 1) % size; 2620cc48ffa7SToby Isaac recvfrom = (rank + size + 1) % size; 2621cc48ffa7SToby Isaac } else { 2622cc48ffa7SToby Isaac sendto = recvfrom = 0; 2623cc48ffa7SToby Isaac } 26249566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 26259566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 2626cc48ffa7SToby Isaac recvisfrom = rank; 2627cc48ffa7SToby Isaac for (i = 0; i < size; i++) { 2628cc48ffa7SToby Isaac /* we have finished receiving in sending, bufs can be read/modified */ 2629cc48ffa7SToby Isaac PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */ 2630cc48ffa7SToby Isaac PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom]; 2631cc48ffa7SToby Isaac 2632cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2633cc48ffa7SToby Isaac /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */ 2634cc48ffa7SToby Isaac sendsiz = cK * bn; 2635cc48ffa7SToby Isaac recvsiz = cK * nextbn; 2636cc48ffa7SToby Isaac recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1]; 26379566063dSJacob Faibussowitsch PetscCallMPI(MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0])); 26389566063dSJacob Faibussowitsch PetscCallMPI(MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1])); 2639cc48ffa7SToby Isaac } 2640cc48ffa7SToby Isaac 2641cc48ffa7SToby Isaac /* local aseq * sendbuf^T */ 26429566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn)); 2643792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "T", &cm, &cn, &ck, &_DOne, av, &alda, sendbuf, &cn, &_DZero, cv + clda * ranges[recvisfrom], &clda)); 2644cc48ffa7SToby Isaac 2645cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2646cc48ffa7SToby Isaac /* wait for the sends and receives to complete, swap sendbuf and recvbuf */ 26479566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE)); 2648cc48ffa7SToby Isaac } 2649cc48ffa7SToby Isaac bn = nextbn; 2650cc48ffa7SToby Isaac recvisfrom = nextrecvisfrom; 2651cc48ffa7SToby Isaac sendbuf = recvbuf; 2652cc48ffa7SToby Isaac } 26539566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 26549566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 26559566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 26569566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 26579566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 2658cc48ffa7SToby Isaac PetscFunctionReturn(0); 2659cc48ffa7SToby Isaac } 2660cc48ffa7SToby Isaac 26619371c9d4SSatish Balay static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C) { 2662faa55883SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 26636718818eSStefano Zampini Mat_MatTransMultDense *abt; 2664faa55883SToby Isaac MPI_Comm comm; 2665637a0070SStefano Zampini PetscMPIInt size; 2666637a0070SStefano Zampini PetscScalar *cv, *sendbuf, *recvbuf; 2667637a0070SStefano Zampini const PetscScalar *av, *bv; 2668637a0070SStefano Zampini PetscInt blda, i, cK = A->cmap->N, k, j, bn; 2669faa55883SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2670637a0070SStefano Zampini PetscBLASInt cm, cn, ck, alda, clda; 2671faa55883SToby Isaac 2672faa55883SToby Isaac PetscFunctionBegin; 26736718818eSStefano Zampini MatCheckProduct(C, 3); 26745f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 26756718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 26769566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 26779566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 26789566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 26799566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 26809566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 26819566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 26829566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 26839566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &blda)); 26849566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 26859566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 2686faa55883SToby Isaac /* copy transpose of B into buf[0] */ 2687faa55883SToby Isaac bn = B->rmap->n; 2688faa55883SToby Isaac sendbuf = abt->buf[0]; 2689faa55883SToby Isaac recvbuf = abt->buf[1]; 2690faa55883SToby Isaac for (k = 0, j = 0; j < bn; j++) { 2691ad540459SPierre Jolivet for (i = 0; i < cK; i++, k++) sendbuf[k] = bv[i * blda + j]; 2692faa55883SToby Isaac } 26939566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 26949566063dSJacob Faibussowitsch PetscCallMPI(MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm)); 26959566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 26969566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 26979566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->cmap->n, &cn)); 2698792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "N", &cm, &cn, &ck, &_DOne, av, &alda, recvbuf, &ck, &_DZero, cv, &clda)); 26999566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 27009566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 27019566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 27029566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 27039566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 2704faa55883SToby Isaac PetscFunctionReturn(0); 2705faa55883SToby Isaac } 2706faa55883SToby Isaac 27079371c9d4SSatish Balay static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) { 27086718818eSStefano Zampini Mat_MatTransMultDense *abt; 2709faa55883SToby Isaac 2710faa55883SToby Isaac PetscFunctionBegin; 27116718818eSStefano Zampini MatCheckProduct(C, 3); 27125f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 27136718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 2714faa55883SToby Isaac switch (abt->alg) { 27159371c9d4SSatish Balay case 1: PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C)); break; 27169371c9d4SSatish Balay default: PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C)); break; 2717faa55883SToby Isaac } 2718faa55883SToby Isaac PetscFunctionReturn(0); 2719faa55883SToby Isaac } 2720faa55883SToby Isaac 27219371c9d4SSatish Balay PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data) { 27226718818eSStefano Zampini Mat_MatMultDense *ab = (Mat_MatMultDense *)data; 2723320f2790SHong Zhang 2724320f2790SHong Zhang PetscFunctionBegin; 27259566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ce)); 27269566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ae)); 27279566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Be)); 27289566063dSJacob Faibussowitsch PetscCall(PetscFree(ab)); 2729320f2790SHong Zhang PetscFunctionReturn(0); 2730320f2790SHong Zhang } 2731320f2790SHong Zhang 27325242a7b1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 27339371c9d4SSatish Balay PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) { 27346718818eSStefano Zampini Mat_MatMultDense *ab; 2735320f2790SHong Zhang 2736320f2790SHong Zhang PetscFunctionBegin; 27376718818eSStefano Zampini MatCheckProduct(C, 3); 27385f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Missing product data"); 27396718818eSStefano Zampini ab = (Mat_MatMultDense *)C->product->data; 27409566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(A, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Ae)); 27419566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(B, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Be)); 27429566063dSJacob Faibussowitsch PetscCall(MatMatMultNumeric_Elemental(ab->Ae, ab->Be, ab->Ce)); 27439566063dSJacob Faibussowitsch PetscCall(MatConvert(ab->Ce, MATMPIDENSE, MAT_REUSE_MATRIX, &C)); 2744320f2790SHong Zhang PetscFunctionReturn(0); 2745320f2790SHong Zhang } 2746320f2790SHong Zhang 27479371c9d4SSatish Balay static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) { 2748320f2790SHong Zhang Mat Ae, Be, Ce; 2749320f2790SHong Zhang Mat_MatMultDense *ab; 2750320f2790SHong Zhang 2751320f2790SHong Zhang PetscFunctionBegin; 27526718818eSStefano Zampini MatCheckProduct(C, 4); 27535f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 27544222ddf1SHong Zhang /* check local size of A and B */ 2755320f2790SHong Zhang if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend) { 275698921bdaSJacob Faibussowitsch SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2757320f2790SHong Zhang } 2758320f2790SHong Zhang 27594222ddf1SHong Zhang /* create elemental matrices Ae and Be */ 27609566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &Ae)); 27619566063dSJacob Faibussowitsch PetscCall(MatSetSizes(Ae, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 27629566063dSJacob Faibussowitsch PetscCall(MatSetType(Ae, MATELEMENTAL)); 27639566063dSJacob Faibussowitsch PetscCall(MatSetUp(Ae)); 27649566063dSJacob Faibussowitsch PetscCall(MatSetOption(Ae, MAT_ROW_ORIENTED, PETSC_FALSE)); 2765320f2790SHong Zhang 27669566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &Be)); 27679566063dSJacob Faibussowitsch PetscCall(MatSetSizes(Be, PETSC_DECIDE, PETSC_DECIDE, B->rmap->N, B->cmap->N)); 27689566063dSJacob Faibussowitsch PetscCall(MatSetType(Be, MATELEMENTAL)); 27699566063dSJacob Faibussowitsch PetscCall(MatSetUp(Be)); 27709566063dSJacob Faibussowitsch PetscCall(MatSetOption(Be, MAT_ROW_ORIENTED, PETSC_FALSE)); 2771320f2790SHong Zhang 27724222ddf1SHong Zhang /* compute symbolic Ce = Ae*Be */ 27739566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)C), &Ce)); 27749566063dSJacob Faibussowitsch PetscCall(MatMatMultSymbolic_Elemental(Ae, Be, fill, Ce)); 27754222ddf1SHong Zhang 27764222ddf1SHong Zhang /* setup C */ 27779566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, PETSC_DECIDE, PETSC_DECIDE)); 27789566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATDENSE)); 27799566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2780320f2790SHong Zhang 2781320f2790SHong Zhang /* create data structure for reuse Cdense */ 27829566063dSJacob Faibussowitsch PetscCall(PetscNew(&ab)); 2783320f2790SHong Zhang ab->Ae = Ae; 2784320f2790SHong Zhang ab->Be = Be; 2785320f2790SHong Zhang ab->Ce = Ce; 27866718818eSStefano Zampini 27876718818eSStefano Zampini C->product->data = ab; 27886718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense; 27894222ddf1SHong Zhang C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense; 2790320f2790SHong Zhang PetscFunctionReturn(0); 2791320f2790SHong Zhang } 27924222ddf1SHong Zhang #endif 27934222ddf1SHong Zhang /* ----------------------------------------------- */ 27944222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 27959371c9d4SSatish Balay static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C) { 2796320f2790SHong Zhang PetscFunctionBegin; 27974222ddf1SHong Zhang C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense; 27984222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_AB; 2799320f2790SHong Zhang PetscFunctionReturn(0); 2800320f2790SHong Zhang } 28015242a7b1SHong Zhang #endif 280286aefd0dSHong Zhang 28039371c9d4SSatish Balay static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C) { 28044222ddf1SHong Zhang Mat_Product *product = C->product; 28054222ddf1SHong Zhang Mat A = product->A, B = product->B; 28064222ddf1SHong Zhang 28074222ddf1SHong Zhang PetscFunctionBegin; 28084222ddf1SHong Zhang if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) 280998921bdaSJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 28106718818eSStefano Zampini C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense; 28116718818eSStefano Zampini C->ops->productsymbolic = MatProductSymbolic_AtB; 28124222ddf1SHong Zhang PetscFunctionReturn(0); 28134222ddf1SHong Zhang } 28144222ddf1SHong Zhang 28159371c9d4SSatish Balay static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C) { 28164222ddf1SHong Zhang Mat_Product *product = C->product; 28174222ddf1SHong Zhang const char *algTypes[2] = {"allgatherv", "cyclic"}; 28184222ddf1SHong Zhang PetscInt alg, nalg = 2; 28194222ddf1SHong Zhang PetscBool flg = PETSC_FALSE; 28204222ddf1SHong Zhang 28214222ddf1SHong Zhang PetscFunctionBegin; 28224222ddf1SHong Zhang /* Set default algorithm */ 28234222ddf1SHong Zhang alg = 0; /* default is allgatherv */ 28249566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "default", &flg)); 282548a46eb9SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 28264222ddf1SHong Zhang 28274222ddf1SHong Zhang /* Get runtime option */ 28284222ddf1SHong Zhang if (product->api_user) { 2829d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatMatTransposeMult", "Mat"); 28309566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via", "Algorithmic approach", "MatMatTransposeMult", algTypes, nalg, algTypes[alg], &alg, &flg)); 2831d0609cedSBarry Smith PetscOptionsEnd(); 28324222ddf1SHong Zhang } else { 2833d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_ABt", "Mat"); 28349566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_ABt", algTypes, nalg, algTypes[alg], &alg, &flg)); 2835d0609cedSBarry Smith PetscOptionsEnd(); 28364222ddf1SHong Zhang } 283748a46eb9SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 28384222ddf1SHong Zhang 28394222ddf1SHong Zhang C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense; 28404222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_ABt; 28414222ddf1SHong Zhang PetscFunctionReturn(0); 28424222ddf1SHong Zhang } 28434222ddf1SHong Zhang 28449371c9d4SSatish Balay PETSC_INTERN PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C) { 28454222ddf1SHong Zhang Mat_Product *product = C->product; 28464222ddf1SHong Zhang 28474222ddf1SHong Zhang PetscFunctionBegin; 28484222ddf1SHong Zhang switch (product->type) { 28494222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 28509371c9d4SSatish Balay case MATPRODUCT_AB: PetscCall(MatProductSetFromOptions_MPIDense_AB(C)); break; 28514222ddf1SHong Zhang #endif 28529371c9d4SSatish Balay case MATPRODUCT_AtB: PetscCall(MatProductSetFromOptions_MPIDense_AtB(C)); break; 28539371c9d4SSatish Balay case MATPRODUCT_ABt: PetscCall(MatProductSetFromOptions_MPIDense_ABt(C)); break; 28549371c9d4SSatish Balay default: break; 28554222ddf1SHong Zhang } 28564222ddf1SHong Zhang PetscFunctionReturn(0); 28574222ddf1SHong Zhang } 2858