xref: /petsc/src/mat/impls/dense/mpi/mpidense.c (revision 8f83a4d96e6432e9a06bd6cd8c5929cf0bb638f8)
1be1d678aSKris Buschelman 
2ed3cc1f0SBarry Smith /*
3ed3cc1f0SBarry Smith    Basic functions for basic parallel dense matrices.
4ed3cc1f0SBarry Smith */
5ed3cc1f0SBarry Smith 
6c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h> /*I   "petscmat.h"  I*/
78949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h>
8baa3c1c6SHong Zhang #include <petscblaslapack.h>
98965ea79SLois Curfman McInnes 
10ab92ecdeSBarry Smith /*@
11ab92ecdeSBarry Smith 
12ab92ecdeSBarry Smith       MatDenseGetLocalMatrix - For a MATMPIDENSE or MATSEQDENSE matrix returns the sequential
13ab92ecdeSBarry Smith               matrix that represents the operator. For sequential matrices it returns itself.
14ab92ecdeSBarry Smith 
15ab92ecdeSBarry Smith     Input Parameter:
16ab92ecdeSBarry Smith .      A - the Seq or MPI dense matrix
17ab92ecdeSBarry Smith 
18ab92ecdeSBarry Smith     Output Parameter:
19ab92ecdeSBarry Smith .      B - the inner matrix
20ab92ecdeSBarry Smith 
218e6c10adSSatish Balay     Level: intermediate
228e6c10adSSatish Balay 
23ab92ecdeSBarry Smith @*/
249371c9d4SSatish Balay PetscErrorCode MatDenseGetLocalMatrix(Mat A, Mat *B) {
25ab92ecdeSBarry Smith   Mat_MPIDense *mat = (Mat_MPIDense *)A->data;
26ace3abfcSBarry Smith   PetscBool     flg;
27ab92ecdeSBarry Smith 
28ab92ecdeSBarry Smith   PetscFunctionBegin;
29d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
30d5ea218eSStefano Zampini   PetscValidPointer(B, 2);
319566063dSJacob Faibussowitsch   PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATMPIDENSE, &flg));
322205254eSKarl Rupp   if (flg) *B = mat->A;
33f140bc17SStefano Zampini   else {
349566063dSJacob Faibussowitsch     PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATSEQDENSE, &flg));
3528b400f6SJacob Faibussowitsch     PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for matrix type %s", ((PetscObject)A)->type_name);
36f140bc17SStefano Zampini     *B = A;
37f140bc17SStefano Zampini   }
38ab92ecdeSBarry Smith   PetscFunctionReturn(0);
39ab92ecdeSBarry Smith }
40ab92ecdeSBarry Smith 
419371c9d4SSatish Balay PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s) {
42a76f77c3SStefano Zampini   Mat_MPIDense *Amat = (Mat_MPIDense *)A->data;
43a76f77c3SStefano Zampini   Mat_MPIDense *Bmat = (Mat_MPIDense *)B->data;
44a76f77c3SStefano Zampini 
45a76f77c3SStefano Zampini   PetscFunctionBegin;
469566063dSJacob Faibussowitsch   PetscCall(MatCopy(Amat->A, Bmat->A, s));
47a76f77c3SStefano Zampini   PetscFunctionReturn(0);
48a76f77c3SStefano Zampini }
49a76f77c3SStefano Zampini 
509371c9d4SSatish Balay PetscErrorCode MatShift_MPIDense(Mat A, PetscScalar alpha) {
512f605a99SJose E. Roman   Mat_MPIDense *mat = (Mat_MPIDense *)A->data;
522f605a99SJose E. Roman   PetscInt      j, lda, rstart = A->rmap->rstart, rend = A->rmap->rend, rend2;
532f605a99SJose E. Roman   PetscScalar  *v;
542f605a99SJose E. Roman 
552f605a99SJose E. Roman   PetscFunctionBegin;
562f605a99SJose E. Roman   PetscCall(MatDenseGetArray(mat->A, &v));
572f605a99SJose E. Roman   PetscCall(MatDenseGetLDA(mat->A, &lda));
582f605a99SJose E. Roman   rend2 = PetscMin(rend, A->cmap->N);
592f605a99SJose E. Roman   if (rend2 > rstart) {
602f605a99SJose E. Roman     for (j = rstart; j < rend2; j++) v[j - rstart + j * lda] += alpha;
612f605a99SJose E. Roman     PetscCall(PetscLogFlops(rend2 - rstart));
622f605a99SJose E. Roman   }
632f605a99SJose E. Roman   PetscCall(MatDenseRestoreArray(mat->A, &v));
642f605a99SJose E. Roman   PetscFunctionReturn(0);
652f605a99SJose E. Roman }
662f605a99SJose E. Roman 
679371c9d4SSatish Balay PetscErrorCode MatGetRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) {
68ba8c8a56SBarry Smith   Mat_MPIDense *mat = (Mat_MPIDense *)A->data;
69d0f46423SBarry Smith   PetscInt      lrow, rstart = A->rmap->rstart, rend = A->rmap->rend;
70ba8c8a56SBarry Smith 
71ba8c8a56SBarry Smith   PetscFunctionBegin;
72aed4548fSBarry Smith   PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows");
73ba8c8a56SBarry Smith   lrow = row - rstart;
749566063dSJacob Faibussowitsch   PetscCall(MatGetRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v));
75ba8c8a56SBarry Smith   PetscFunctionReturn(0);
76ba8c8a56SBarry Smith }
77ba8c8a56SBarry Smith 
789371c9d4SSatish Balay PetscErrorCode MatRestoreRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) {
79637a0070SStefano Zampini   Mat_MPIDense *mat = (Mat_MPIDense *)A->data;
80637a0070SStefano Zampini   PetscInt      lrow, rstart = A->rmap->rstart, rend = A->rmap->rend;
81ba8c8a56SBarry Smith 
82ba8c8a56SBarry Smith   PetscFunctionBegin;
83aed4548fSBarry Smith   PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows");
84637a0070SStefano Zampini   lrow = row - rstart;
859566063dSJacob Faibussowitsch   PetscCall(MatRestoreRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v));
86ba8c8a56SBarry Smith   PetscFunctionReturn(0);
87ba8c8a56SBarry Smith }
88ba8c8a56SBarry Smith 
899371c9d4SSatish Balay PetscErrorCode MatGetDiagonalBlock_MPIDense(Mat A, Mat *a) {
900de54da6SSatish Balay   Mat_MPIDense *mdn = (Mat_MPIDense *)A->data;
91d0f46423SBarry Smith   PetscInt      m = A->rmap->n, rstart = A->rmap->rstart;
9287828ca2SBarry Smith   PetscScalar  *array;
930de54da6SSatish Balay   MPI_Comm      comm;
944b6ae80fSStefano Zampini   PetscBool     flg;
9511bd1e4dSLisandro Dalcin   Mat           B;
960de54da6SSatish Balay 
970de54da6SSatish Balay   PetscFunctionBegin;
989566063dSJacob Faibussowitsch   PetscCall(MatHasCongruentLayouts(A, &flg));
9928b400f6SJacob Faibussowitsch   PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only square matrices supported.");
1009566063dSJacob Faibussowitsch   PetscCall(PetscObjectQuery((PetscObject)A, "DiagonalBlock", (PetscObject *)&B));
101616b8fbbSStefano Zampini   if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */
1024b6ae80fSStefano Zampini 
1039566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSECUDA, &flg));
10428b400f6SJacob Faibussowitsch     PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSECUDA);
1059566063dSJacob Faibussowitsch     PetscCall(PetscObjectGetComm((PetscObject)(mdn->A), &comm));
1069566063dSJacob Faibussowitsch     PetscCall(MatCreate(comm, &B));
1079566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B, m, m, m, m));
1089566063dSJacob Faibussowitsch     PetscCall(MatSetType(B, ((PetscObject)mdn->A)->type_name));
1099566063dSJacob Faibussowitsch     PetscCall(MatDenseGetArrayRead(mdn->A, (const PetscScalar **)&array));
1109566063dSJacob Faibussowitsch     PetscCall(MatSeqDenseSetPreallocation(B, array + m * rstart));
1119566063dSJacob Faibussowitsch     PetscCall(MatDenseRestoreArrayRead(mdn->A, (const PetscScalar **)&array));
1129566063dSJacob Faibussowitsch     PetscCall(PetscObjectCompose((PetscObject)A, "DiagonalBlock", (PetscObject)B));
11311bd1e4dSLisandro Dalcin     *a = B;
1149566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&B));
1152205254eSKarl Rupp   } else *a = B;
1160de54da6SSatish Balay   PetscFunctionReturn(0);
1170de54da6SSatish Balay }
1180de54da6SSatish Balay 
1199371c9d4SSatish Balay PetscErrorCode MatSetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv) {
12039b7565bSBarry Smith   Mat_MPIDense *A = (Mat_MPIDense *)mat->data;
121d0f46423SBarry Smith   PetscInt      i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row;
122ace3abfcSBarry Smith   PetscBool     roworiented = A->roworiented;
1238965ea79SLois Curfman McInnes 
1243a40ed3dSBarry Smith   PetscFunctionBegin;
1258965ea79SLois Curfman McInnes   for (i = 0; i < m; i++) {
1265ef9f2a5SBarry Smith     if (idxm[i] < 0) continue;
12708401ef6SPierre Jolivet     PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large");
1288965ea79SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
1298965ea79SLois Curfman McInnes       row = idxm[i] - rstart;
13039b7565bSBarry Smith       if (roworiented) {
1319566063dSJacob Faibussowitsch         PetscCall(MatSetValues(A->A, 1, &row, n, idxn, v + i * n, addv));
1323a40ed3dSBarry Smith       } else {
1338965ea79SLois Curfman McInnes         for (j = 0; j < n; j++) {
1345ef9f2a5SBarry Smith           if (idxn[j] < 0) continue;
13508401ef6SPierre Jolivet           PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large");
1369566063dSJacob Faibussowitsch           PetscCall(MatSetValues(A->A, 1, &row, 1, &idxn[j], v + i + j * m, addv));
13739b7565bSBarry Smith         }
1388965ea79SLois Curfman McInnes       }
1392205254eSKarl Rupp     } else if (!A->donotstash) {
1405080c13bSMatthew G Knepley       mat->assembled = PETSC_FALSE;
14139b7565bSBarry Smith       if (roworiented) {
1429566063dSJacob Faibussowitsch         PetscCall(MatStashValuesRow_Private(&mat->stash, idxm[i], n, idxn, v + i * n, PETSC_FALSE));
143d36fbae8SSatish Balay       } else {
1449566063dSJacob Faibussowitsch         PetscCall(MatStashValuesCol_Private(&mat->stash, idxm[i], n, idxn, v + i, m, PETSC_FALSE));
14539b7565bSBarry Smith       }
146b49de8d1SLois Curfman McInnes     }
147b49de8d1SLois Curfman McInnes   }
1483a40ed3dSBarry Smith   PetscFunctionReturn(0);
149b49de8d1SLois Curfman McInnes }
150b49de8d1SLois Curfman McInnes 
1519371c9d4SSatish Balay PetscErrorCode MatGetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], PetscScalar v[]) {
152b49de8d1SLois Curfman McInnes   Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data;
153d0f46423SBarry Smith   PetscInt      i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row;
154b49de8d1SLois Curfman McInnes 
1553a40ed3dSBarry Smith   PetscFunctionBegin;
156b49de8d1SLois Curfman McInnes   for (i = 0; i < m; i++) {
15754c59aa7SJacob Faibussowitsch     if (idxm[i] < 0) continue; /* negative row */
15854c59aa7SJacob Faibussowitsch     PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large");
159b49de8d1SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
160b49de8d1SLois Curfman McInnes       row = idxm[i] - rstart;
161b49de8d1SLois Curfman McInnes       for (j = 0; j < n; j++) {
16254c59aa7SJacob Faibussowitsch         if (idxn[j] < 0) continue; /* negative column */
16354c59aa7SJacob Faibussowitsch         PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large");
1649566063dSJacob Faibussowitsch         PetscCall(MatGetValues(mdn->A, 1, &row, 1, &idxn[j], v + i * n + j));
165b49de8d1SLois Curfman McInnes       }
166e7e72b3dSBarry Smith     } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Only local values currently supported");
1678965ea79SLois Curfman McInnes   }
1683a40ed3dSBarry Smith   PetscFunctionReturn(0);
1698965ea79SLois Curfman McInnes }
1708965ea79SLois Curfman McInnes 
1719371c9d4SSatish Balay static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A, PetscInt *lda) {
17249a6ff4bSBarry Smith   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
17349a6ff4bSBarry Smith 
17449a6ff4bSBarry Smith   PetscFunctionBegin;
1759566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A, lda));
17649a6ff4bSBarry Smith   PetscFunctionReturn(0);
17749a6ff4bSBarry Smith }
17849a6ff4bSBarry Smith 
1799371c9d4SSatish Balay static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A, PetscInt lda) {
180ad16ce7aSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
18117359960SJose E. Roman   PetscBool     iscuda;
182ad16ce7aSStefano Zampini 
183ad16ce7aSStefano Zampini   PetscFunctionBegin;
18417359960SJose E. Roman   if (!a->A) {
18528b400f6SJacob Faibussowitsch     PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
1869566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(A->rmap));
1879566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(A->cmap));
1889566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF, &a->A));
1899566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->A));
1909566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(a->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N));
1919566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda));
1929566063dSJacob Faibussowitsch     PetscCall(MatSetType(a->A, iscuda ? MATSEQDENSECUDA : MATSEQDENSE));
19317359960SJose E. Roman   }
1949566063dSJacob Faibussowitsch   PetscCall(MatDenseSetLDA(a->A, lda));
195ad16ce7aSStefano Zampini   PetscFunctionReturn(0);
196ad16ce7aSStefano Zampini }
197ad16ce7aSStefano Zampini 
1989371c9d4SSatish Balay static PetscErrorCode MatDenseGetArray_MPIDense(Mat A, PetscScalar **array) {
199ff14e315SSatish Balay   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
200ff14e315SSatish Balay 
2013a40ed3dSBarry Smith   PetscFunctionBegin;
20228b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
2039566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(a->A, array));
2043a40ed3dSBarry Smith   PetscFunctionReturn(0);
205ff14e315SSatish Balay }
206ff14e315SSatish Balay 
2079371c9d4SSatish Balay static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A, const PetscScalar **array) {
2088572280aSBarry Smith   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
2098572280aSBarry Smith 
2108572280aSBarry Smith   PetscFunctionBegin;
21128b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
2129566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A, array));
2138572280aSBarry Smith   PetscFunctionReturn(0);
2148572280aSBarry Smith }
2158572280aSBarry Smith 
2169371c9d4SSatish Balay static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A, PetscScalar **array) {
2176947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
2186947451fSStefano Zampini 
2196947451fSStefano Zampini   PetscFunctionBegin;
22028b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
2219566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(a->A, array));
2226947451fSStefano Zampini   PetscFunctionReturn(0);
2236947451fSStefano Zampini }
2246947451fSStefano Zampini 
2259371c9d4SSatish Balay static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A, const PetscScalar *array) {
226d3042a70SBarry Smith   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
227d3042a70SBarry Smith 
228d3042a70SBarry Smith   PetscFunctionBegin;
22928b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
23028b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
2319566063dSJacob Faibussowitsch   PetscCall(MatDensePlaceArray(a->A, array));
232d3042a70SBarry Smith   PetscFunctionReturn(0);
233d3042a70SBarry Smith }
234d3042a70SBarry Smith 
2359371c9d4SSatish Balay static PetscErrorCode MatDenseResetArray_MPIDense(Mat A) {
236d3042a70SBarry Smith   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
237d3042a70SBarry Smith 
238d3042a70SBarry Smith   PetscFunctionBegin;
23928b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
24028b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
2419566063dSJacob Faibussowitsch   PetscCall(MatDenseResetArray(a->A));
242d3042a70SBarry Smith   PetscFunctionReturn(0);
243d3042a70SBarry Smith }
244d3042a70SBarry Smith 
2459371c9d4SSatish Balay static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A, const PetscScalar *array) {
246d5ea218eSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
247d5ea218eSStefano Zampini 
248d5ea218eSStefano Zampini   PetscFunctionBegin;
24928b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
25028b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
2519566063dSJacob Faibussowitsch   PetscCall(MatDenseReplaceArray(a->A, array));
252d5ea218eSStefano Zampini   PetscFunctionReturn(0);
253d5ea218eSStefano Zampini }
254d5ea218eSStefano Zampini 
2559371c9d4SSatish Balay static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A, IS isrow, IS iscol, MatReuse scall, Mat *B) {
256ca3fa75bSLois Curfman McInnes   Mat_MPIDense      *mat = (Mat_MPIDense *)A->data, *newmatd;
257637a0070SStefano Zampini   PetscInt           lda, i, j, rstart, rend, nrows, ncols, Ncols, nlrows, nlcols;
2585d0c19d7SBarry Smith   const PetscInt    *irow, *icol;
259637a0070SStefano Zampini   const PetscScalar *v;
260637a0070SStefano Zampini   PetscScalar       *bv;
261ca3fa75bSLois Curfman McInnes   Mat                newmat;
2624aa3045dSJed Brown   IS                 iscol_local;
26342a884f0SBarry Smith   MPI_Comm           comm_is, comm_mat;
264ca3fa75bSLois Curfman McInnes 
265ca3fa75bSLois Curfman McInnes   PetscFunctionBegin;
2669566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A, &comm_mat));
2679566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)iscol, &comm_is));
26808401ef6SPierre Jolivet   PetscCheck(comm_mat == comm_is, PETSC_COMM_SELF, PETSC_ERR_ARG_NOTSAMECOMM, "IS communicator must match matrix communicator");
26942a884f0SBarry Smith 
2709566063dSJacob Faibussowitsch   PetscCall(ISAllGather(iscol, &iscol_local));
2719566063dSJacob Faibussowitsch   PetscCall(ISGetIndices(isrow, &irow));
2729566063dSJacob Faibussowitsch   PetscCall(ISGetIndices(iscol_local, &icol));
2739566063dSJacob Faibussowitsch   PetscCall(ISGetLocalSize(isrow, &nrows));
2749566063dSJacob Faibussowitsch   PetscCall(ISGetLocalSize(iscol, &ncols));
2759566063dSJacob Faibussowitsch   PetscCall(ISGetSize(iscol, &Ncols)); /* global number of columns, size of iscol_local */
276ca3fa75bSLois Curfman McInnes 
277ca3fa75bSLois Curfman McInnes   /* No parallel redistribution currently supported! Should really check each index set
2787eba5e9cSLois Curfman McInnes      to comfirm that it is OK.  ... Currently supports only submatrix same partitioning as
2797eba5e9cSLois Curfman McInnes      original matrix! */
280ca3fa75bSLois Curfman McInnes 
2819566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(A, &nlrows, &nlcols));
2829566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRange(A, &rstart, &rend));
283ca3fa75bSLois Curfman McInnes 
284ca3fa75bSLois Curfman McInnes   /* Check submatrix call */
285ca3fa75bSLois Curfman McInnes   if (scall == MAT_REUSE_MATRIX) {
286e32f2f54SBarry Smith     /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */
2877eba5e9cSLois Curfman McInnes     /* Really need to test rows and column sizes! */
288ca3fa75bSLois Curfman McInnes     newmat = *B;
289ca3fa75bSLois Curfman McInnes   } else {
290ca3fa75bSLois Curfman McInnes     /* Create and fill new matrix */
2919566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &newmat));
2929566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(newmat, nrows, ncols, PETSC_DECIDE, Ncols));
2939566063dSJacob Faibussowitsch     PetscCall(MatSetType(newmat, ((PetscObject)A)->type_name));
2949566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(newmat, NULL));
295ca3fa75bSLois Curfman McInnes   }
296ca3fa75bSLois Curfman McInnes 
297ca3fa75bSLois Curfman McInnes   /* Now extract the data pointers and do the copy, column at a time */
298ca3fa75bSLois Curfman McInnes   newmatd = (Mat_MPIDense *)newmat->data;
2999566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(newmatd->A, &bv));
3009566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(mat->A, &v));
3019566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(mat->A, &lda));
3024aa3045dSJed Brown   for (i = 0; i < Ncols; i++) {
303637a0070SStefano Zampini     const PetscScalar *av = v + lda * icol[i];
304ad540459SPierre Jolivet     for (j = 0; j < nrows; j++) *bv++ = av[irow[j] - rstart];
305ca3fa75bSLois Curfman McInnes   }
3069566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(mat->A, &v));
3079566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(newmatd->A, &bv));
308ca3fa75bSLois Curfman McInnes 
309ca3fa75bSLois Curfman McInnes   /* Assemble the matrices so that the correct flags are set */
3109566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(newmat, MAT_FINAL_ASSEMBLY));
3119566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(newmat, MAT_FINAL_ASSEMBLY));
312ca3fa75bSLois Curfman McInnes 
313ca3fa75bSLois Curfman McInnes   /* Free work space */
3149566063dSJacob Faibussowitsch   PetscCall(ISRestoreIndices(isrow, &irow));
3159566063dSJacob Faibussowitsch   PetscCall(ISRestoreIndices(iscol_local, &icol));
3169566063dSJacob Faibussowitsch   PetscCall(ISDestroy(&iscol_local));
317ca3fa75bSLois Curfman McInnes   *B = newmat;
318ca3fa75bSLois Curfman McInnes   PetscFunctionReturn(0);
319ca3fa75bSLois Curfman McInnes }
320ca3fa75bSLois Curfman McInnes 
3219371c9d4SSatish Balay PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A, PetscScalar **array) {
32273a71a0fSBarry Smith   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
32373a71a0fSBarry Smith 
3243a40ed3dSBarry Smith   PetscFunctionBegin;
3259566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(a->A, array));
3263a40ed3dSBarry Smith   PetscFunctionReturn(0);
327ff14e315SSatish Balay }
328ff14e315SSatish Balay 
3299371c9d4SSatish Balay PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A, const PetscScalar **array) {
3308572280aSBarry Smith   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
3318572280aSBarry Smith 
3328572280aSBarry Smith   PetscFunctionBegin;
3339566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A, array));
3348572280aSBarry Smith   PetscFunctionReturn(0);
3358572280aSBarry Smith }
3368572280aSBarry Smith 
3379371c9d4SSatish Balay PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A, PetscScalar **array) {
3386947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
3396947451fSStefano Zampini 
3406947451fSStefano Zampini   PetscFunctionBegin;
3419566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(a->A, array));
3426947451fSStefano Zampini   PetscFunctionReturn(0);
3436947451fSStefano Zampini }
3446947451fSStefano Zampini 
3459371c9d4SSatish Balay PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat, MatAssemblyType mode) {
34639ddd567SLois Curfman McInnes   Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data;
34713f74950SBarry Smith   PetscInt      nstash, reallocs;
3488965ea79SLois Curfman McInnes 
3493a40ed3dSBarry Smith   PetscFunctionBegin;
3504067683fSStefano Zampini   if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(0);
3518965ea79SLois Curfman McInnes 
3529566063dSJacob Faibussowitsch   PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range));
3539566063dSJacob Faibussowitsch   PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs));
3549566063dSJacob Faibussowitsch   PetscCall(PetscInfo(mdn->A, "Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n", nstash, reallocs));
3553a40ed3dSBarry Smith   PetscFunctionReturn(0);
3568965ea79SLois Curfman McInnes }
3578965ea79SLois Curfman McInnes 
3589371c9d4SSatish Balay PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat, MatAssemblyType mode) {
35939ddd567SLois Curfman McInnes   Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data;
36013f74950SBarry Smith   PetscInt      i, *row, *col, flg, j, rstart, ncols;
36113f74950SBarry Smith   PetscMPIInt   n;
36287828ca2SBarry Smith   PetscScalar  *val;
3638965ea79SLois Curfman McInnes 
3643a40ed3dSBarry Smith   PetscFunctionBegin;
365910cf402Sprj-   if (!mdn->donotstash && !mat->nooffprocentries) {
3668965ea79SLois Curfman McInnes     /*  wait on receives */
3677ef1d9bdSSatish Balay     while (1) {
3689566063dSJacob Faibussowitsch       PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg));
3697ef1d9bdSSatish Balay       if (!flg) break;
3708965ea79SLois Curfman McInnes 
3717ef1d9bdSSatish Balay       for (i = 0; i < n;) {
3727ef1d9bdSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
3732205254eSKarl Rupp         for (j = i, rstart = row[j]; j < n; j++) {
3742205254eSKarl Rupp           if (row[j] != rstart) break;
3752205254eSKarl Rupp         }
3767ef1d9bdSSatish Balay         if (j < n) ncols = j - i;
3777ef1d9bdSSatish Balay         else ncols = n - i;
3787ef1d9bdSSatish Balay         /* Now assemble all these values with a single function call */
3799566063dSJacob Faibussowitsch         PetscCall(MatSetValues_MPIDense(mat, 1, row + i, ncols, col + i, val + i, mat->insertmode));
3807ef1d9bdSSatish Balay         i = j;
3818965ea79SLois Curfman McInnes       }
3827ef1d9bdSSatish Balay     }
3839566063dSJacob Faibussowitsch     PetscCall(MatStashScatterEnd_Private(&mat->stash));
384910cf402Sprj-   }
3858965ea79SLois Curfman McInnes 
3869566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(mdn->A, mode));
3879566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(mdn->A, mode));
3883a40ed3dSBarry Smith   PetscFunctionReturn(0);
3898965ea79SLois Curfman McInnes }
3908965ea79SLois Curfman McInnes 
3919371c9d4SSatish Balay PetscErrorCode MatZeroEntries_MPIDense(Mat A) {
39239ddd567SLois Curfman McInnes   Mat_MPIDense *l = (Mat_MPIDense *)A->data;
3933a40ed3dSBarry Smith 
3943a40ed3dSBarry Smith   PetscFunctionBegin;
3959566063dSJacob Faibussowitsch   PetscCall(MatZeroEntries(l->A));
3963a40ed3dSBarry Smith   PetscFunctionReturn(0);
3978965ea79SLois Curfman McInnes }
3988965ea79SLois Curfman McInnes 
3999371c9d4SSatish Balay PetscErrorCode MatZeroRows_MPIDense(Mat A, PetscInt n, const PetscInt rows[], PetscScalar diag, Vec x, Vec b) {
40039ddd567SLois Curfman McInnes   Mat_MPIDense *l = (Mat_MPIDense *)A->data;
401637a0070SStefano Zampini   PetscInt      i, len, *lrows;
402637a0070SStefano Zampini 
403637a0070SStefano Zampini   PetscFunctionBegin;
404637a0070SStefano Zampini   /* get locally owned rows */
4059566063dSJacob Faibussowitsch   PetscCall(PetscLayoutMapLocal(A->rmap, n, rows, &len, &lrows, NULL));
406637a0070SStefano Zampini   /* fix right hand side if needed */
407637a0070SStefano Zampini   if (x && b) {
40897b48c8fSBarry Smith     const PetscScalar *xx;
40997b48c8fSBarry Smith     PetscScalar       *bb;
4108965ea79SLois Curfman McInnes 
4119566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(x, &xx));
4129566063dSJacob Faibussowitsch     PetscCall(VecGetArrayWrite(b, &bb));
413637a0070SStefano Zampini     for (i = 0; i < len; ++i) bb[lrows[i]] = diag * xx[lrows[i]];
4149566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(x, &xx));
4159566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayWrite(b, &bb));
41697b48c8fSBarry Smith   }
4179566063dSJacob Faibussowitsch   PetscCall(MatZeroRows(l->A, len, lrows, 0.0, NULL, NULL));
418e2eb51b1SBarry Smith   if (diag != 0.0) {
419637a0070SStefano Zampini     Vec d;
420b9679d65SBarry Smith 
4219566063dSJacob Faibussowitsch     PetscCall(MatCreateVecs(A, NULL, &d));
4229566063dSJacob Faibussowitsch     PetscCall(VecSet(d, diag));
4239566063dSJacob Faibussowitsch     PetscCall(MatDiagonalSet(A, d, INSERT_VALUES));
4249566063dSJacob Faibussowitsch     PetscCall(VecDestroy(&d));
425b9679d65SBarry Smith   }
4269566063dSJacob Faibussowitsch   PetscCall(PetscFree(lrows));
4273a40ed3dSBarry Smith   PetscFunctionReturn(0);
4288965ea79SLois Curfman McInnes }
4298965ea79SLois Curfman McInnes 
430cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat, Vec, Vec);
431cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat, Vec, Vec, Vec);
432cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat, Vec, Vec);
433cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat, Vec, Vec, Vec);
434cc2e6a90SBarry Smith 
4359371c9d4SSatish Balay PetscErrorCode MatMult_MPIDense(Mat mat, Vec xx, Vec yy) {
43639ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense *)mat->data;
437637a0070SStefano Zampini   const PetscScalar *ax;
438637a0070SStefano Zampini   PetscScalar       *ay;
439d0295fc0SJunchao Zhang   PetscMemType       axmtype, aymtype;
440c456f294SBarry Smith 
4413a40ed3dSBarry Smith   PetscFunctionBegin;
4426f08ad05SPierre Jolivet   if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
4439566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype));
4449566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype));
4459566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE));
4469566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE));
4479566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay));
4489566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(xx, &ax));
4499566063dSJacob Faibussowitsch   PetscCall((*mdn->A->ops->mult)(mdn->A, mdn->lvec, yy));
4503a40ed3dSBarry Smith   PetscFunctionReturn(0);
4518965ea79SLois Curfman McInnes }
4528965ea79SLois Curfman McInnes 
4539371c9d4SSatish Balay PetscErrorCode MatMultAdd_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz) {
45439ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense *)mat->data;
455637a0070SStefano Zampini   const PetscScalar *ax;
456637a0070SStefano Zampini   PetscScalar       *ay;
457d0295fc0SJunchao Zhang   PetscMemType       axmtype, aymtype;
458c456f294SBarry Smith 
4593a40ed3dSBarry Smith   PetscFunctionBegin;
4606f08ad05SPierre Jolivet   if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat));
4619566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype));
4629566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype));
4639566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE));
4649566063dSJacob Faibussowitsch   PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE));
4659566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay));
4669566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(xx, &ax));
4679566063dSJacob Faibussowitsch   PetscCall((*mdn->A->ops->multadd)(mdn->A, mdn->lvec, yy, zz));
4683a40ed3dSBarry Smith   PetscFunctionReturn(0);
4698965ea79SLois Curfman McInnes }
4708965ea79SLois Curfman McInnes 
4719371c9d4SSatish Balay PetscErrorCode MatMultTranspose_MPIDense(Mat A, Vec xx, Vec yy) {
472096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense *)A->data;
473637a0070SStefano Zampini   const PetscScalar *ax;
474637a0070SStefano Zampini   PetscScalar       *ay;
475d0295fc0SJunchao Zhang   PetscMemType       axmtype, aymtype;
476096963f5SLois Curfman McInnes 
4773a40ed3dSBarry Smith   PetscFunctionBegin;
4786f08ad05SPierre Jolivet   if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
4799566063dSJacob Faibussowitsch   PetscCall(VecSet(yy, 0.0));
4809566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec));
4819566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype));
4829566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype));
4839566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM));
4849566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM));
4859566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax));
4869566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(yy, &ay));
4873a40ed3dSBarry Smith   PetscFunctionReturn(0);
488096963f5SLois Curfman McInnes }
489096963f5SLois Curfman McInnes 
4909371c9d4SSatish Balay PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) {
491096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense *)A->data;
492637a0070SStefano Zampini   const PetscScalar *ax;
493637a0070SStefano Zampini   PetscScalar       *ay;
494d0295fc0SJunchao Zhang   PetscMemType       axmtype, aymtype;
495096963f5SLois Curfman McInnes 
4963a40ed3dSBarry Smith   PetscFunctionBegin;
4976f08ad05SPierre Jolivet   if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
4989566063dSJacob Faibussowitsch   PetscCall(VecCopy(yy, zz));
4999566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec));
5009566063dSJacob Faibussowitsch   PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype));
5019566063dSJacob Faibussowitsch   PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype));
5029566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM));
5039566063dSJacob Faibussowitsch   PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM));
5049566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax));
5059566063dSJacob Faibussowitsch   PetscCall(VecRestoreArrayAndMemType(zz, &ay));
5063a40ed3dSBarry Smith   PetscFunctionReturn(0);
507096963f5SLois Curfman McInnes }
508096963f5SLois Curfman McInnes 
5099371c9d4SSatish Balay PetscErrorCode MatGetDiagonal_MPIDense(Mat A, Vec v) {
51039ddd567SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense *)A->data;
511637a0070SStefano Zampini   PetscInt           lda, len, i, n, m = A->rmap->n, radd;
51287828ca2SBarry Smith   PetscScalar       *x, zero = 0.0;
513637a0070SStefano Zampini   const PetscScalar *av;
514ed3cc1f0SBarry Smith 
5153a40ed3dSBarry Smith   PetscFunctionBegin;
5169566063dSJacob Faibussowitsch   PetscCall(VecSet(v, zero));
5179566063dSJacob Faibussowitsch   PetscCall(VecGetArray(v, &x));
5189566063dSJacob Faibussowitsch   PetscCall(VecGetSize(v, &n));
51908401ef6SPierre Jolivet   PetscCheck(n == A->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming mat and vec");
520d0f46423SBarry Smith   len  = PetscMin(a->A->rmap->n, a->A->cmap->n);
521d0f46423SBarry Smith   radd = A->rmap->rstart * m;
5229566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A, &av));
5239566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A, &lda));
524ad540459SPierre Jolivet   for (i = 0; i < len; i++) x[i] = av[radd + i * lda + i];
5259566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A, &av));
5269566063dSJacob Faibussowitsch   PetscCall(VecRestoreArray(v, &x));
5273a40ed3dSBarry Smith   PetscFunctionReturn(0);
5288965ea79SLois Curfman McInnes }
5298965ea79SLois Curfman McInnes 
5309371c9d4SSatish Balay PetscErrorCode MatDestroy_MPIDense(Mat mat) {
5313501a2bdSLois Curfman McInnes   Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data;
532ed3cc1f0SBarry Smith 
5333a40ed3dSBarry Smith   PetscFunctionBegin;
534aa482453SBarry Smith #if defined(PETSC_USE_LOG)
535c0aa6a63SJacob Faibussowitsch   PetscLogObjectState((PetscObject)mat, "Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT, mat->rmap->N, mat->cmap->N);
5368965ea79SLois Curfman McInnes #endif
5379566063dSJacob Faibussowitsch   PetscCall(MatStashDestroy_Private(&mat->stash));
53828b400f6SJacob Faibussowitsch   PetscCheck(!mdn->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
53928b400f6SJacob Faibussowitsch   PetscCheck(!mdn->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
5409566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&mdn->A));
5419566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&mdn->lvec));
5429566063dSJacob Faibussowitsch   PetscCall(PetscSFDestroy(&mdn->Mvctx));
5439566063dSJacob Faibussowitsch   PetscCall(VecDestroy(&mdn->cvec));
5449566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&mdn->cmat));
54501b82886SBarry Smith 
5469566063dSJacob Faibussowitsch   PetscCall(PetscFree(mat->data));
5479566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)mat, NULL));
5488baccfbdSHong Zhang 
5499566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", NULL));
5509566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", NULL));
5519566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", NULL));
5529566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", NULL));
5539566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", NULL));
5549566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", NULL));
5559566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", NULL));
5569566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", NULL));
5579566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", NULL));
5589566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", NULL));
5599566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", NULL));
5609566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", NULL));
5619566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", NULL));
5628baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
5639566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", NULL));
5648baccfbdSHong Zhang #endif
565d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
5669566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", NULL));
567d24d4204SJose E. Roman #endif
5689566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", NULL));
5699566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", NULL));
5709566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", NULL));
5716718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
5729566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", NULL));
5739566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", NULL));
5742e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", NULL));
5752e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensecuda_mpidense_C", NULL));
5762e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL));
5772e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL));
5782e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL));
5792e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL));
5802e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArray_C", NULL));
5812e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayRead_C", NULL));
5822e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayWrite_C", NULL));
5832e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArray_C", NULL));
5842e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayRead_C", NULL));
5852e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayWrite_C", NULL));
5862e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAPlaceArray_C", NULL));
5872e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAResetArray_C", NULL));
5882e956fe4SStefano Zampini   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAReplaceArray_C", NULL));
5896718818eSStefano Zampini #endif
5909566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", NULL));
5919566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", NULL));
5929566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", NULL));
5939566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", NULL));
5949566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", NULL));
5959566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", NULL));
5969566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", NULL));
5979566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", NULL));
5989566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", NULL));
5999566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", NULL));
600f8103e6bSStefano Zampini 
601f8103e6bSStefano Zampini   PetscCall(PetscObjectCompose((PetscObject)mat, "DiagonalBlock", NULL));
6023a40ed3dSBarry Smith   PetscFunctionReturn(0);
6038965ea79SLois Curfman McInnes }
60439ddd567SLois Curfman McInnes 
60552c5f739Sprj- PETSC_INTERN PetscErrorCode MatView_SeqDense(Mat, PetscViewer);
60652c5f739Sprj- 
6079804daf3SBarry Smith #include <petscdraw.h>
6089371c9d4SSatish Balay static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat, PetscViewer viewer) {
60939ddd567SLois Curfman McInnes   Mat_MPIDense     *mdn = (Mat_MPIDense *)mat->data;
610616b8fbbSStefano Zampini   PetscMPIInt       rank;
61119fd82e9SBarry Smith   PetscViewerType   vtype;
612ace3abfcSBarry Smith   PetscBool         iascii, isdraw;
613b0a32e0cSBarry Smith   PetscViewer       sviewer;
614f3ef73ceSBarry Smith   PetscViewerFormat format;
6158965ea79SLois Curfman McInnes 
6163a40ed3dSBarry Smith   PetscFunctionBegin;
6179566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat), &rank));
6189566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii));
6199566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw));
62032077d6dSBarry Smith   if (iascii) {
6219566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetType(viewer, &vtype));
6229566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetFormat(viewer, &format));
623456192e2SBarry Smith     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
6244e220ebcSLois Curfman McInnes       MatInfo info;
6259566063dSJacob Faibussowitsch       PetscCall(MatGetInfo(mat, MAT_LOCAL, &info));
6269566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPushSynchronized(viewer));
6279371c9d4SSatish Balay       PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, "  [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n", rank, mat->rmap->n, (PetscInt)info.nz_used, (PetscInt)info.nz_allocated,
6289371c9d4SSatish Balay                                                    (PetscInt)info.memory));
6299566063dSJacob Faibussowitsch       PetscCall(PetscViewerFlush(viewer));
6309566063dSJacob Faibussowitsch       PetscCall(PetscViewerASCIIPopSynchronized(viewer));
6316f08ad05SPierre Jolivet       if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx, viewer));
6323a40ed3dSBarry Smith       PetscFunctionReturn(0);
633fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
6343a40ed3dSBarry Smith       PetscFunctionReturn(0);
6358965ea79SLois Curfman McInnes     }
636f1af5d2fSBarry Smith   } else if (isdraw) {
637b0a32e0cSBarry Smith     PetscDraw draw;
638ace3abfcSBarry Smith     PetscBool isnull;
639f1af5d2fSBarry Smith 
6409566063dSJacob Faibussowitsch     PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw));
6419566063dSJacob Faibussowitsch     PetscCall(PetscDrawIsNull(draw, &isnull));
642f1af5d2fSBarry Smith     if (isnull) PetscFunctionReturn(0);
643f1af5d2fSBarry Smith   }
64477ed5343SBarry Smith 
6457da1fb6eSBarry Smith   {
6468965ea79SLois Curfman McInnes     /* assemble the entire matrix onto first processor. */
6478965ea79SLois Curfman McInnes     Mat          A;
648d0f46423SBarry Smith     PetscInt     M = mat->rmap->N, N = mat->cmap->N, m, row, i, nz;
649ba8c8a56SBarry Smith     PetscInt    *cols;
650ba8c8a56SBarry Smith     PetscScalar *vals;
6518965ea79SLois Curfman McInnes 
6529566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &A));
653dd400576SPatrick Sanan     if (rank == 0) {
6549566063dSJacob Faibussowitsch       PetscCall(MatSetSizes(A, M, N, M, N));
6553a40ed3dSBarry Smith     } else {
6569566063dSJacob Faibussowitsch       PetscCall(MatSetSizes(A, 0, 0, M, N));
6578965ea79SLois Curfman McInnes     }
6587adad957SLisandro Dalcin     /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */
6599566063dSJacob Faibussowitsch     PetscCall(MatSetType(A, MATMPIDENSE));
6609566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(A, NULL));
6619566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)mat, (PetscObject)A));
6628965ea79SLois Curfman McInnes 
66339ddd567SLois Curfman McInnes     /* Copy the matrix ... This isn't the most efficient means,
66439ddd567SLois Curfman McInnes        but it's quick for now */
66551022da4SBarry Smith     A->insertmode = INSERT_VALUES;
6662205254eSKarl Rupp 
6672205254eSKarl Rupp     row = mat->rmap->rstart;
6682205254eSKarl Rupp     m   = mdn->A->rmap->n;
6698965ea79SLois Curfman McInnes     for (i = 0; i < m; i++) {
6709566063dSJacob Faibussowitsch       PetscCall(MatGetRow_MPIDense(mat, row, &nz, &cols, &vals));
6719566063dSJacob Faibussowitsch       PetscCall(MatSetValues_MPIDense(A, 1, &row, nz, cols, vals, INSERT_VALUES));
6729566063dSJacob Faibussowitsch       PetscCall(MatRestoreRow_MPIDense(mat, row, &nz, &cols, &vals));
67339ddd567SLois Curfman McInnes       row++;
6748965ea79SLois Curfman McInnes     }
6758965ea79SLois Curfman McInnes 
6769566063dSJacob Faibussowitsch     PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY));
6779566063dSJacob Faibussowitsch     PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY));
6789566063dSJacob Faibussowitsch     PetscCall(PetscViewerGetSubViewer(viewer, PETSC_COMM_SELF, &sviewer));
679dd400576SPatrick Sanan     if (rank == 0) {
6809566063dSJacob Faibussowitsch       PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense *)(A->data))->A, ((PetscObject)mat)->name));
6819566063dSJacob Faibussowitsch       PetscCall(MatView_SeqDense(((Mat_MPIDense *)(A->data))->A, sviewer));
6828965ea79SLois Curfman McInnes     }
6839566063dSJacob Faibussowitsch     PetscCall(PetscViewerRestoreSubViewer(viewer, PETSC_COMM_SELF, &sviewer));
6849566063dSJacob Faibussowitsch     PetscCall(PetscViewerFlush(viewer));
6859566063dSJacob Faibussowitsch     PetscCall(MatDestroy(&A));
6868965ea79SLois Curfman McInnes   }
6873a40ed3dSBarry Smith   PetscFunctionReturn(0);
6888965ea79SLois Curfman McInnes }
6898965ea79SLois Curfman McInnes 
6909371c9d4SSatish Balay PetscErrorCode MatView_MPIDense(Mat mat, PetscViewer viewer) {
691ace3abfcSBarry Smith   PetscBool iascii, isbinary, isdraw, issocket;
6928965ea79SLois Curfman McInnes 
693433994e6SBarry Smith   PetscFunctionBegin;
6949566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii));
6959566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary));
6969566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSOCKET, &issocket));
6979566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw));
6980f5bd95cSBarry Smith 
69932077d6dSBarry Smith   if (iascii || issocket || isdraw) {
7009566063dSJacob Faibussowitsch     PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat, viewer));
7011baa6e33SBarry Smith   } else if (isbinary) PetscCall(MatView_Dense_Binary(mat, viewer));
7023a40ed3dSBarry Smith   PetscFunctionReturn(0);
7038965ea79SLois Curfman McInnes }
7048965ea79SLois Curfman McInnes 
7059371c9d4SSatish Balay PetscErrorCode MatGetInfo_MPIDense(Mat A, MatInfoType flag, MatInfo *info) {
7063501a2bdSLois Curfman McInnes   Mat_MPIDense  *mat = (Mat_MPIDense *)A->data;
7073501a2bdSLois Curfman McInnes   Mat            mdn = mat->A;
7083966268fSBarry Smith   PetscLogDouble isend[5], irecv[5];
7098965ea79SLois Curfman McInnes 
7103a40ed3dSBarry Smith   PetscFunctionBegin;
7114e220ebcSLois Curfman McInnes   info->block_size = 1.0;
7122205254eSKarl Rupp 
7139566063dSJacob Faibussowitsch   PetscCall(MatGetInfo(mdn, MAT_LOCAL, info));
7142205254eSKarl Rupp 
7159371c9d4SSatish Balay   isend[0] = info->nz_used;
7169371c9d4SSatish Balay   isend[1] = info->nz_allocated;
7179371c9d4SSatish Balay   isend[2] = info->nz_unneeded;
7189371c9d4SSatish Balay   isend[3] = info->memory;
7199371c9d4SSatish Balay   isend[4] = info->mallocs;
7208965ea79SLois Curfman McInnes   if (flag == MAT_LOCAL) {
7214e220ebcSLois Curfman McInnes     info->nz_used      = isend[0];
7224e220ebcSLois Curfman McInnes     info->nz_allocated = isend[1];
7234e220ebcSLois Curfman McInnes     info->nz_unneeded  = isend[2];
7244e220ebcSLois Curfman McInnes     info->memory       = isend[3];
7254e220ebcSLois Curfman McInnes     info->mallocs      = isend[4];
7268965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_MAX) {
7271c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_MAX, PetscObjectComm((PetscObject)A)));
7282205254eSKarl Rupp 
7294e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7304e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7314e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7324e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7334e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7348965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_SUM) {
7351c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_SUM, PetscObjectComm((PetscObject)A)));
7362205254eSKarl Rupp 
7374e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7384e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7394e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7404e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7414e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7428965ea79SLois Curfman McInnes   }
7434e220ebcSLois Curfman McInnes   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
7444e220ebcSLois Curfman McInnes   info->fill_ratio_needed = 0;
7454e220ebcSLois Curfman McInnes   info->factor_mallocs    = 0;
7463a40ed3dSBarry Smith   PetscFunctionReturn(0);
7478965ea79SLois Curfman McInnes }
7488965ea79SLois Curfman McInnes 
7499371c9d4SSatish Balay PetscErrorCode MatSetOption_MPIDense(Mat A, MatOption op, PetscBool flg) {
75039ddd567SLois Curfman McInnes   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
7518965ea79SLois Curfman McInnes 
7523a40ed3dSBarry Smith   PetscFunctionBegin;
75312c028f9SKris Buschelman   switch (op) {
754512a5fc5SBarry Smith   case MAT_NEW_NONZERO_LOCATIONS:
75512c028f9SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
75612c028f9SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
75743674050SBarry Smith     MatCheckPreallocated(A, 1);
7589566063dSJacob Faibussowitsch     PetscCall(MatSetOption(a->A, op, flg));
75912c028f9SKris Buschelman     break;
76012c028f9SKris Buschelman   case MAT_ROW_ORIENTED:
76143674050SBarry Smith     MatCheckPreallocated(A, 1);
7624e0d8c25SBarry Smith     a->roworiented = flg;
7639566063dSJacob Faibussowitsch     PetscCall(MatSetOption(a->A, op, flg));
76412c028f9SKris Buschelman     break;
7658c78258cSHong Zhang   case MAT_FORCE_DIAGONAL_ENTRIES:
76613fa8e87SLisandro Dalcin   case MAT_KEEP_NONZERO_PATTERN:
76712c028f9SKris Buschelman   case MAT_USE_HASH_TABLE:
7689371c9d4SSatish Balay   case MAT_SORTED_FULL: PetscCall(PetscInfo(A, "Option %s ignored\n", MatOptions[op])); break;
7699371c9d4SSatish Balay   case MAT_IGNORE_OFF_PROC_ENTRIES: a->donotstash = flg; break;
77077e54ba9SKris Buschelman   case MAT_SYMMETRIC:
77177e54ba9SKris Buschelman   case MAT_STRUCTURALLY_SYMMETRIC:
7729a4540c5SBarry Smith   case MAT_HERMITIAN:
7739a4540c5SBarry Smith   case MAT_SYMMETRY_ETERNAL:
774b94d7dedSBarry Smith   case MAT_STRUCTURAL_SYMMETRY_ETERNAL:
775b94d7dedSBarry Smith   case MAT_SPD:
776600fe468SBarry Smith   case MAT_IGNORE_LOWER_TRIANGULAR:
7775d7aebe8SStefano Zampini   case MAT_IGNORE_ZERO_ENTRIES:
778b94d7dedSBarry Smith   case MAT_SPD_ETERNAL:
779b94d7dedSBarry Smith     /* if the diagonal matrix is square it inherits some of the properties above */
7809566063dSJacob Faibussowitsch     PetscCall(PetscInfo(A, "Option %s ignored\n", MatOptions[op]));
78177e54ba9SKris Buschelman     break;
7829371c9d4SSatish Balay   default: SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "unknown option %s", MatOptions[op]);
7833a40ed3dSBarry Smith   }
7843a40ed3dSBarry Smith   PetscFunctionReturn(0);
7858965ea79SLois Curfman McInnes }
7868965ea79SLois Curfman McInnes 
7879371c9d4SSatish Balay PetscErrorCode MatDiagonalScale_MPIDense(Mat A, Vec ll, Vec rr) {
7885b2fa520SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense *)A->data;
789637a0070SStefano Zampini   const PetscScalar *l;
790637a0070SStefano Zampini   PetscScalar        x, *v, *vv, *r;
791637a0070SStefano Zampini   PetscInt           i, j, s2a, s3a, s2, s3, m = mdn->A->rmap->n, n = mdn->A->cmap->n, lda;
7925b2fa520SLois Curfman McInnes 
7935b2fa520SLois Curfman McInnes   PetscFunctionBegin;
7949566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(mdn->A, &vv));
7959566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(mdn->A, &lda));
7969566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(A, &s2, &s3));
7975b2fa520SLois Curfman McInnes   if (ll) {
7989566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(ll, &s2a));
79908401ef6SPierre Jolivet     PetscCheck(s2a == s2, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2);
8009566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(ll, &l));
8015b2fa520SLois Curfman McInnes     for (i = 0; i < m; i++) {
8025b2fa520SLois Curfman McInnes       x = l[i];
803637a0070SStefano Zampini       v = vv + i;
8049371c9d4SSatish Balay       for (j = 0; j < n; j++) {
8059371c9d4SSatish Balay         (*v) *= x;
8069371c9d4SSatish Balay         v += lda;
8079371c9d4SSatish Balay       }
8085b2fa520SLois Curfman McInnes     }
8099566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(ll, &l));
8109566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(1.0 * n * m));
8115b2fa520SLois Curfman McInnes   }
8125b2fa520SLois Curfman McInnes   if (rr) {
813637a0070SStefano Zampini     const PetscScalar *ar;
814637a0070SStefano Zampini 
8159566063dSJacob Faibussowitsch     PetscCall(VecGetLocalSize(rr, &s3a));
81608401ef6SPierre Jolivet     PetscCheck(s3a == s3, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3);
8179566063dSJacob Faibussowitsch     PetscCall(VecGetArrayRead(rr, &ar));
8186f08ad05SPierre Jolivet     if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A));
8199566063dSJacob Faibussowitsch     PetscCall(VecGetArray(mdn->lvec, &r));
8209566063dSJacob Faibussowitsch     PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE));
8219566063dSJacob Faibussowitsch     PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE));
8229566063dSJacob Faibussowitsch     PetscCall(VecRestoreArrayRead(rr, &ar));
8235b2fa520SLois Curfman McInnes     for (i = 0; i < n; i++) {
8245b2fa520SLois Curfman McInnes       x = r[i];
825637a0070SStefano Zampini       v = vv + i * lda;
8262205254eSKarl Rupp       for (j = 0; j < m; j++) (*v++) *= x;
8275b2fa520SLois Curfman McInnes     }
8289566063dSJacob Faibussowitsch     PetscCall(VecRestoreArray(mdn->lvec, &r));
8299566063dSJacob Faibussowitsch     PetscCall(PetscLogFlops(1.0 * n * m));
8305b2fa520SLois Curfman McInnes   }
8319566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(mdn->A, &vv));
8325b2fa520SLois Curfman McInnes   PetscFunctionReturn(0);
8335b2fa520SLois Curfman McInnes }
8345b2fa520SLois Curfman McInnes 
8359371c9d4SSatish Balay PetscErrorCode MatNorm_MPIDense(Mat A, NormType type, PetscReal *nrm) {
8363501a2bdSLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense *)A->data;
83713f74950SBarry Smith   PetscInt           i, j;
838616b8fbbSStefano Zampini   PetscMPIInt        size;
839329f5518SBarry Smith   PetscReal          sum = 0.0;
840637a0070SStefano Zampini   const PetscScalar *av, *v;
8413501a2bdSLois Curfman McInnes 
8423a40ed3dSBarry Smith   PetscFunctionBegin;
8439566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(mdn->A, &av));
844637a0070SStefano Zampini   v = av;
8459566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size));
846616b8fbbSStefano Zampini   if (size == 1) {
8479566063dSJacob Faibussowitsch     PetscCall(MatNorm(mdn->A, type, nrm));
8483501a2bdSLois Curfman McInnes   } else {
8493501a2bdSLois Curfman McInnes     if (type == NORM_FROBENIUS) {
850d0f46423SBarry Smith       for (i = 0; i < mdn->A->cmap->n * mdn->A->rmap->n; i++) {
8519371c9d4SSatish Balay         sum += PetscRealPart(PetscConj(*v) * (*v));
8529371c9d4SSatish Balay         v++;
8533501a2bdSLois Curfman McInnes       }
8541c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(&sum, nrm, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A)));
8558f1a2a5eSBarry Smith       *nrm = PetscSqrtReal(*nrm);
8569566063dSJacob Faibussowitsch       PetscCall(PetscLogFlops(2.0 * mdn->A->cmap->n * mdn->A->rmap->n));
8573a40ed3dSBarry Smith     } else if (type == NORM_1) {
858329f5518SBarry Smith       PetscReal *tmp, *tmp2;
8599566063dSJacob Faibussowitsch       PetscCall(PetscCalloc2(A->cmap->N, &tmp, A->cmap->N, &tmp2));
860064f8208SBarry Smith       *nrm = 0.0;
861637a0070SStefano Zampini       v    = av;
862d0f46423SBarry Smith       for (j = 0; j < mdn->A->cmap->n; j++) {
863d0f46423SBarry Smith         for (i = 0; i < mdn->A->rmap->n; i++) {
8649371c9d4SSatish Balay           tmp[j] += PetscAbsScalar(*v);
8659371c9d4SSatish Balay           v++;
8663501a2bdSLois Curfman McInnes         }
8673501a2bdSLois Curfman McInnes       }
8681c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(tmp, tmp2, A->cmap->N, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A)));
869d0f46423SBarry Smith       for (j = 0; j < A->cmap->N; j++) {
870064f8208SBarry Smith         if (tmp2[j] > *nrm) *nrm = tmp2[j];
8713501a2bdSLois Curfman McInnes       }
8729566063dSJacob Faibussowitsch       PetscCall(PetscFree2(tmp, tmp2));
8739566063dSJacob Faibussowitsch       PetscCall(PetscLogFlops(A->cmap->n * A->rmap->n));
8743a40ed3dSBarry Smith     } else if (type == NORM_INFINITY) { /* max row norm */
875329f5518SBarry Smith       PetscReal ntemp;
8769566063dSJacob Faibussowitsch       PetscCall(MatNorm(mdn->A, type, &ntemp));
8771c2dc1cbSBarry Smith       PetscCall(MPIU_Allreduce(&ntemp, nrm, 1, MPIU_REAL, MPIU_MAX, PetscObjectComm((PetscObject)A)));
878ce94432eSBarry Smith     } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for two norm");
8793501a2bdSLois Curfman McInnes   }
8809566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(mdn->A, &av));
8813a40ed3dSBarry Smith   PetscFunctionReturn(0);
8823501a2bdSLois Curfman McInnes }
8833501a2bdSLois Curfman McInnes 
8849371c9d4SSatish Balay PetscErrorCode MatTranspose_MPIDense(Mat A, MatReuse reuse, Mat *matout) {
8853501a2bdSLois Curfman McInnes   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
8863501a2bdSLois Curfman McInnes   Mat           B;
887d0f46423SBarry Smith   PetscInt      M = A->rmap->N, N = A->cmap->N, m, n, *rwork, rstart = A->rmap->rstart;
888637a0070SStefano Zampini   PetscInt      j, i, lda;
88987828ca2SBarry Smith   PetscScalar  *v;
8903501a2bdSLois Curfman McInnes 
8913a40ed3dSBarry Smith   PetscFunctionBegin;
8927fb60732SBarry Smith   if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *matout));
893cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) {
8949566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B));
8959566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(B, A->cmap->n, A->rmap->n, N, M));
8969566063dSJacob Faibussowitsch     PetscCall(MatSetType(B, ((PetscObject)A)->type_name));
8979566063dSJacob Faibussowitsch     PetscCall(MatMPIDenseSetPreallocation(B, NULL));
898637a0070SStefano Zampini   } else B = *matout;
8993501a2bdSLois Curfman McInnes 
9009371c9d4SSatish Balay   m = a->A->rmap->n;
9019371c9d4SSatish Balay   n = a->A->cmap->n;
9029566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)&v));
9039566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A, &lda));
9049566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(m, &rwork));
9053501a2bdSLois Curfman McInnes   for (i = 0; i < m; i++) rwork[i] = rstart + i;
9061acff37aSSatish Balay   for (j = 0; j < n; j++) {
9079566063dSJacob Faibussowitsch     PetscCall(MatSetValues(B, 1, &j, m, rwork, v, INSERT_VALUES));
908637a0070SStefano Zampini     v += lda;
9093501a2bdSLois Curfman McInnes   }
9109566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)&v));
9119566063dSJacob Faibussowitsch   PetscCall(PetscFree(rwork));
9129566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY));
9139566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY));
914cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) {
9153501a2bdSLois Curfman McInnes     *matout = B;
9163501a2bdSLois Curfman McInnes   } else {
9179566063dSJacob Faibussowitsch     PetscCall(MatHeaderMerge(A, &B));
9183501a2bdSLois Curfman McInnes   }
9193a40ed3dSBarry Smith   PetscFunctionReturn(0);
920096963f5SLois Curfman McInnes }
921096963f5SLois Curfman McInnes 
9226849ba73SBarry Smith static PetscErrorCode       MatDuplicate_MPIDense(Mat, MatDuplicateOption, Mat *);
92352c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat, PetscScalar);
9248965ea79SLois Curfman McInnes 
9259371c9d4SSatish Balay PetscErrorCode MatSetUp_MPIDense(Mat A) {
926273d9f13SBarry Smith   PetscFunctionBegin;
9279566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->rmap));
9289566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->cmap));
92948a46eb9SPierre Jolivet   if (!A->preallocated) PetscCall(MatMPIDenseSetPreallocation(A, NULL));
930273d9f13SBarry Smith   PetscFunctionReturn(0);
931273d9f13SBarry Smith }
932273d9f13SBarry Smith 
9339371c9d4SSatish Balay PetscErrorCode MatAXPY_MPIDense(Mat Y, PetscScalar alpha, Mat X, MatStructure str) {
934488007eeSBarry Smith   Mat_MPIDense *A = (Mat_MPIDense *)Y->data, *B = (Mat_MPIDense *)X->data;
935488007eeSBarry Smith 
936488007eeSBarry Smith   PetscFunctionBegin;
9379566063dSJacob Faibussowitsch   PetscCall(MatAXPY(A->A, alpha, B->A, str));
938488007eeSBarry Smith   PetscFunctionReturn(0);
939488007eeSBarry Smith }
940488007eeSBarry Smith 
9419371c9d4SSatish Balay PetscErrorCode MatConjugate_MPIDense(Mat mat) {
942ba337c44SJed Brown   Mat_MPIDense *a = (Mat_MPIDense *)mat->data;
943ba337c44SJed Brown 
944ba337c44SJed Brown   PetscFunctionBegin;
9459566063dSJacob Faibussowitsch   PetscCall(MatConjugate(a->A));
946ba337c44SJed Brown   PetscFunctionReturn(0);
947ba337c44SJed Brown }
948ba337c44SJed Brown 
9499371c9d4SSatish Balay PetscErrorCode MatRealPart_MPIDense(Mat A) {
950ba337c44SJed Brown   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
951ba337c44SJed Brown 
952ba337c44SJed Brown   PetscFunctionBegin;
9539566063dSJacob Faibussowitsch   PetscCall(MatRealPart(a->A));
954ba337c44SJed Brown   PetscFunctionReturn(0);
955ba337c44SJed Brown }
956ba337c44SJed Brown 
9579371c9d4SSatish Balay PetscErrorCode MatImaginaryPart_MPIDense(Mat A) {
958ba337c44SJed Brown   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
959ba337c44SJed Brown 
960ba337c44SJed Brown   PetscFunctionBegin;
9619566063dSJacob Faibussowitsch   PetscCall(MatImaginaryPart(a->A));
962ba337c44SJed Brown   PetscFunctionReturn(0);
963ba337c44SJed Brown }
964ba337c44SJed Brown 
9659371c9d4SSatish Balay static PetscErrorCode MatGetColumnVector_MPIDense(Mat A, Vec v, PetscInt col) {
966637a0070SStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
96749a6ff4bSBarry Smith 
96849a6ff4bSBarry Smith   PetscFunctionBegin;
96928b400f6SJacob Faibussowitsch   PetscCheck(a->A, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing local matrix");
97028b400f6SJacob Faibussowitsch   PetscCheck(a->A->ops->getcolumnvector, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing get column operation");
9719566063dSJacob Faibussowitsch   PetscCall((*a->A->ops->getcolumnvector)(a->A, v, col));
97249a6ff4bSBarry Smith   PetscFunctionReturn(0);
97349a6ff4bSBarry Smith }
97449a6ff4bSBarry Smith 
975857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat, PetscInt, PetscReal *);
97652c5f739Sprj- 
9779371c9d4SSatish Balay PetscErrorCode MatGetColumnReductions_MPIDense(Mat A, PetscInt type, PetscReal *reductions) {
978a873a8cdSSam Reynolds   PetscInt      i, m, n;
9790716a85fSBarry Smith   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
9800716a85fSBarry Smith   PetscReal    *work;
9810716a85fSBarry Smith 
9820716a85fSBarry Smith   PetscFunctionBegin;
9839566063dSJacob Faibussowitsch   PetscCall(MatGetSize(A, &m, &n));
9849566063dSJacob Faibussowitsch   PetscCall(PetscMalloc1(n, &work));
985857cbf51SRichard Tran Mills   if (type == REDUCTION_MEAN_REALPART) {
9869566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_REALPART, work));
987857cbf51SRichard Tran Mills   } else if (type == REDUCTION_MEAN_IMAGINARYPART) {
9889566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_IMAGINARYPART, work));
989a873a8cdSSam Reynolds   } else {
9909566063dSJacob Faibussowitsch     PetscCall(MatGetColumnReductions_SeqDense(a->A, type, work));
991a873a8cdSSam Reynolds   }
992857cbf51SRichard Tran Mills   if (type == NORM_2) {
9930716a85fSBarry Smith     for (i = 0; i < n; i++) work[i] *= work[i];
9940716a85fSBarry Smith   }
995857cbf51SRichard Tran Mills   if (type == NORM_INFINITY) {
9961c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(work, reductions, n, MPIU_REAL, MPIU_MAX, A->hdr.comm));
9970716a85fSBarry Smith   } else {
9981c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(work, reductions, n, MPIU_REAL, MPIU_SUM, A->hdr.comm));
9990716a85fSBarry Smith   }
10009566063dSJacob Faibussowitsch   PetscCall(PetscFree(work));
1001857cbf51SRichard Tran Mills   if (type == NORM_2) {
1002a873a8cdSSam Reynolds     for (i = 0; i < n; i++) reductions[i] = PetscSqrtReal(reductions[i]);
1003857cbf51SRichard Tran Mills   } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) {
1004a873a8cdSSam Reynolds     for (i = 0; i < n; i++) reductions[i] /= m;
10050716a85fSBarry Smith   }
10060716a85fSBarry Smith   PetscFunctionReturn(0);
10070716a85fSBarry Smith }
10080716a85fSBarry Smith 
1009637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
10109371c9d4SSatish Balay PetscErrorCode MatShift_MPIDenseCUDA(Mat A, PetscScalar alpha) {
1011126e4e93SJose E. Roman   PetscScalar *da;
1012126e4e93SJose E. Roman   PetscInt     lda;
1013126e4e93SJose E. Roman 
1014126e4e93SJose E. Roman   PetscFunctionBegin;
1015126e4e93SJose E. Roman   PetscCall(MatDenseCUDAGetArray(A, &da));
1016126e4e93SJose E. Roman   PetscCall(MatDenseGetLDA(A, &lda));
1017126e4e93SJose E. Roman   PetscCall(PetscInfo(A, "Performing Shift on backend\n"));
1018126e4e93SJose E. Roman   PetscCall(MatShift_DenseCUDA_Private(da, alpha, lda, A->rmap->rstart, A->rmap->rend, A->cmap->N));
1019126e4e93SJose E. Roman   PetscCall(MatDenseCUDARestoreArray(A, &da));
1020126e4e93SJose E. Roman   PetscFunctionReturn(0);
1021126e4e93SJose E. Roman }
1022126e4e93SJose E. Roman 
10239371c9d4SSatish Balay static PetscErrorCode MatDenseGetColumnVec_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) {
10246947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
10256947451fSStefano Zampini   PetscInt      lda;
10266947451fSStefano Zampini 
10276947451fSStefano Zampini   PetscFunctionBegin;
102828b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
102928b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
10306947451fSStefano Zampini   if (!a->cvec) {
10319566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec));
10329566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->cvec));
10336947451fSStefano Zampini   }
10346947451fSStefano Zampini   a->vecinuse = col + 1;
10359566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A, &lda));
10369566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArray(a->A, (PetscScalar **)&a->ptrinuse));
10379566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda));
10386947451fSStefano Zampini   *v = a->cvec;
10396947451fSStefano Zampini   PetscFunctionReturn(0);
10406947451fSStefano Zampini }
10416947451fSStefano Zampini 
10429371c9d4SSatish Balay static PetscErrorCode MatDenseRestoreColumnVec_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) {
10436947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
10446947451fSStefano Zampini 
10456947451fSStefano Zampini   PetscFunctionBegin;
104628b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first");
104728b400f6SJacob Faibussowitsch   PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector");
10486947451fSStefano Zampini   a->vecinuse = 0;
10499566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArray(a->A, (PetscScalar **)&a->ptrinuse));
10509566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
1051742765d3SMatthew Knepley   if (v) *v = NULL;
10526947451fSStefano Zampini   PetscFunctionReturn(0);
10536947451fSStefano Zampini }
10546947451fSStefano Zampini 
10559371c9d4SSatish Balay static PetscErrorCode MatDenseGetColumnVecRead_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) {
10566947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
10576947451fSStefano Zampini   PetscInt      lda;
10586947451fSStefano Zampini 
10596947451fSStefano Zampini   PetscFunctionBegin;
106028b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
106128b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
10626947451fSStefano Zampini   if (!a->cvec) {
10639566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec));
10649566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->cvec));
10656947451fSStefano Zampini   }
10666947451fSStefano Zampini   a->vecinuse = col + 1;
10679566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A, &lda));
10689566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayRead(a->A, &a->ptrinuse));
10699566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda));
10709566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(a->cvec));
10716947451fSStefano Zampini   *v = a->cvec;
10726947451fSStefano Zampini   PetscFunctionReturn(0);
10736947451fSStefano Zampini }
10746947451fSStefano Zampini 
10759371c9d4SSatish Balay static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) {
10766947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
10776947451fSStefano Zampini 
10786947451fSStefano Zampini   PetscFunctionBegin;
107928b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first");
108028b400f6SJacob Faibussowitsch   PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector");
10816947451fSStefano Zampini   a->vecinuse = 0;
10829566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayRead(a->A, &a->ptrinuse));
10839566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(a->cvec));
10849566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
1085742765d3SMatthew Knepley   if (v) *v = NULL;
10866947451fSStefano Zampini   PetscFunctionReturn(0);
10876947451fSStefano Zampini }
10886947451fSStefano Zampini 
10899371c9d4SSatish Balay static PetscErrorCode MatDenseGetColumnVecWrite_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) {
10906947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
10916947451fSStefano Zampini   PetscInt      lda;
10926947451fSStefano Zampini 
10936947451fSStefano Zampini   PetscFunctionBegin;
109428b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
109528b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
10966947451fSStefano Zampini   if (!a->cvec) {
10979566063dSJacob Faibussowitsch     PetscCall(VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec));
10989566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->cvec));
10996947451fSStefano Zampini   }
11006947451fSStefano Zampini   a->vecinuse = col + 1;
11019566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A, &lda));
11029566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse));
11039566063dSJacob Faibussowitsch   PetscCall(VecCUDAPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda));
11046947451fSStefano Zampini   *v = a->cvec;
11056947451fSStefano Zampini   PetscFunctionReturn(0);
11066947451fSStefano Zampini }
11076947451fSStefano Zampini 
11089371c9d4SSatish Balay static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDenseCUDA(Mat A, PetscInt col, Vec *v) {
11096947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
11106947451fSStefano Zampini 
11116947451fSStefano Zampini   PetscFunctionBegin;
111228b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first");
111328b400f6SJacob Faibussowitsch   PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector");
11146947451fSStefano Zampini   a->vecinuse = 0;
11159566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse));
11169566063dSJacob Faibussowitsch   PetscCall(VecCUDAResetArray(a->cvec));
1117742765d3SMatthew Knepley   if (v) *v = NULL;
11186947451fSStefano Zampini   PetscFunctionReturn(0);
11196947451fSStefano Zampini }
11206947451fSStefano Zampini 
11219371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAPlaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a) {
1122637a0070SStefano Zampini   Mat_MPIDense *l = (Mat_MPIDense *)A->data;
1123637a0070SStefano Zampini 
1124637a0070SStefano Zampini   PetscFunctionBegin;
112528b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
112628b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
11279566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAPlaceArray(l->A, a));
1128637a0070SStefano Zampini   PetscFunctionReturn(0);
1129637a0070SStefano Zampini }
1130637a0070SStefano Zampini 
11319371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAResetArray_MPIDenseCUDA(Mat A) {
1132637a0070SStefano Zampini   Mat_MPIDense *l = (Mat_MPIDense *)A->data;
1133637a0070SStefano Zampini 
1134637a0070SStefano Zampini   PetscFunctionBegin;
113528b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
113628b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
11379566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAResetArray(l->A));
1138637a0070SStefano Zampini   PetscFunctionReturn(0);
1139637a0070SStefano Zampini }
1140637a0070SStefano Zampini 
11419371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAReplaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a) {
1142d5ea218eSStefano Zampini   Mat_MPIDense *l = (Mat_MPIDense *)A->data;
1143d5ea218eSStefano Zampini 
1144d5ea218eSStefano Zampini   PetscFunctionBegin;
114528b400f6SJacob Faibussowitsch   PetscCheck(!l->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
114628b400f6SJacob Faibussowitsch   PetscCheck(!l->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
11479566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAReplaceArray(l->A, a));
1148d5ea218eSStefano Zampini   PetscFunctionReturn(0);
1149d5ea218eSStefano Zampini }
1150d5ea218eSStefano Zampini 
11519371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAGetArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a) {
1152637a0070SStefano Zampini   Mat_MPIDense *l = (Mat_MPIDense *)A->data;
1153637a0070SStefano Zampini 
1154637a0070SStefano Zampini   PetscFunctionBegin;
11559566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayWrite(l->A, a));
1156637a0070SStefano Zampini   PetscFunctionReturn(0);
1157637a0070SStefano Zampini }
1158637a0070SStefano Zampini 
11599371c9d4SSatish Balay static PetscErrorCode MatDenseCUDARestoreArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a) {
1160637a0070SStefano Zampini   Mat_MPIDense *l = (Mat_MPIDense *)A->data;
1161637a0070SStefano Zampini 
1162637a0070SStefano Zampini   PetscFunctionBegin;
11639566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayWrite(l->A, a));
1164637a0070SStefano Zampini   PetscFunctionReturn(0);
1165637a0070SStefano Zampini }
1166637a0070SStefano Zampini 
11679371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAGetArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a) {
1168637a0070SStefano Zampini   Mat_MPIDense *l = (Mat_MPIDense *)A->data;
1169637a0070SStefano Zampini 
1170637a0070SStefano Zampini   PetscFunctionBegin;
11719566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArrayRead(l->A, a));
1172637a0070SStefano Zampini   PetscFunctionReturn(0);
1173637a0070SStefano Zampini }
1174637a0070SStefano Zampini 
11759371c9d4SSatish Balay static PetscErrorCode MatDenseCUDARestoreArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a) {
1176637a0070SStefano Zampini   Mat_MPIDense *l = (Mat_MPIDense *)A->data;
1177637a0070SStefano Zampini 
1178637a0070SStefano Zampini   PetscFunctionBegin;
11799566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArrayRead(l->A, a));
1180637a0070SStefano Zampini   PetscFunctionReturn(0);
1181637a0070SStefano Zampini }
1182637a0070SStefano Zampini 
11839371c9d4SSatish Balay static PetscErrorCode MatDenseCUDAGetArray_MPIDenseCUDA(Mat A, PetscScalar **a) {
1184637a0070SStefano Zampini   Mat_MPIDense *l = (Mat_MPIDense *)A->data;
1185637a0070SStefano Zampini 
1186637a0070SStefano Zampini   PetscFunctionBegin;
11879566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDAGetArray(l->A, a));
1188637a0070SStefano Zampini   PetscFunctionReturn(0);
1189637a0070SStefano Zampini }
1190637a0070SStefano Zampini 
11919371c9d4SSatish Balay static PetscErrorCode MatDenseCUDARestoreArray_MPIDenseCUDA(Mat A, PetscScalar **a) {
1192637a0070SStefano Zampini   Mat_MPIDense *l = (Mat_MPIDense *)A->data;
1193637a0070SStefano Zampini 
1194637a0070SStefano Zampini   PetscFunctionBegin;
11959566063dSJacob Faibussowitsch   PetscCall(MatDenseCUDARestoreArray(l->A, a));
1196637a0070SStefano Zampini   PetscFunctionReturn(0);
1197637a0070SStefano Zampini }
1198637a0070SStefano Zampini 
11996947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat, PetscInt, Vec *);
12006947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat, PetscInt, Vec *);
12016947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat, PetscInt, Vec *);
12026947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat, PetscInt, Vec *);
12036947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat, PetscInt, Vec *);
12046947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat, PetscInt, Vec *);
12055ea7661aSPierre Jolivet static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat, Mat *);
12066947451fSStefano Zampini 
12079371c9d4SSatish Balay static PetscErrorCode MatBindToCPU_MPIDenseCUDA(Mat mat, PetscBool bind) {
1208637a0070SStefano Zampini   Mat_MPIDense *d = (Mat_MPIDense *)mat->data;
1209637a0070SStefano Zampini 
1210637a0070SStefano Zampini   PetscFunctionBegin;
121128b400f6SJacob Faibussowitsch   PetscCheck(!d->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
121228b400f6SJacob Faibussowitsch   PetscCheck(!d->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
12131baa6e33SBarry Smith   if (d->A) PetscCall(MatBindToCPU(d->A, bind));
1214637a0070SStefano Zampini   mat->boundtocpu = bind;
12156947451fSStefano Zampini   if (!bind) {
12166947451fSStefano Zampini     PetscBool iscuda;
12176947451fSStefano Zampini 
12189566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)d->cvec, VECMPICUDA, &iscuda));
121948a46eb9SPierre Jolivet     if (!iscuda) PetscCall(VecDestroy(&d->cvec));
12209566063dSJacob Faibussowitsch     PetscCall(PetscObjectTypeCompare((PetscObject)d->cmat, MATMPIDENSECUDA, &iscuda));
122148a46eb9SPierre Jolivet     if (!iscuda) PetscCall(MatDestroy(&d->cmat));
12229566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDenseCUDA));
12239566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDenseCUDA));
12249566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDenseCUDA));
12259566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDenseCUDA));
12269566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDenseCUDA));
12279566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDenseCUDA));
1228126e4e93SJose E. Roman     mat->ops->shift = MatShift_MPIDenseCUDA;
12296947451fSStefano Zampini   } else {
12309566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense));
12319566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense));
12329566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense));
12339566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense));
12349566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense));
12359566063dSJacob Faibussowitsch     PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense));
1236126e4e93SJose E. Roman     mat->ops->shift = MatShift_MPIDense;
1237616b8fbbSStefano Zampini   }
12381baa6e33SBarry Smith   if (d->cmat) PetscCall(MatBindToCPU(d->cmat, bind));
1239637a0070SStefano Zampini   PetscFunctionReturn(0);
1240637a0070SStefano Zampini }
1241637a0070SStefano Zampini 
12429371c9d4SSatish Balay PetscErrorCode MatMPIDenseCUDASetPreallocation(Mat A, PetscScalar *d_data) {
1243637a0070SStefano Zampini   Mat_MPIDense *d = (Mat_MPIDense *)A->data;
1244637a0070SStefano Zampini   PetscBool     iscuda;
1245637a0070SStefano Zampini 
1246637a0070SStefano Zampini   PetscFunctionBegin;
1247d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
12489566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda));
1249637a0070SStefano Zampini   if (!iscuda) PetscFunctionReturn(0);
12509566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->rmap));
12519566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(A->cmap));
1252637a0070SStefano Zampini   if (!d->A) {
12539566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF, &d->A));
12549566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)d->A));
12559566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(d->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N));
1256637a0070SStefano Zampini   }
12579566063dSJacob Faibussowitsch   PetscCall(MatSetType(d->A, MATSEQDENSECUDA));
12589566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseCUDASetPreallocation(d->A, d_data));
1259637a0070SStefano Zampini   A->preallocated = PETSC_TRUE;
12606f08ad05SPierre Jolivet   A->assembled    = PETSC_TRUE;
1261637a0070SStefano Zampini   PetscFunctionReturn(0);
1262637a0070SStefano Zampini }
1263637a0070SStefano Zampini #endif
1264637a0070SStefano Zampini 
12659371c9d4SSatish Balay static PetscErrorCode MatSetRandom_MPIDense(Mat x, PetscRandom rctx) {
126673a71a0fSBarry Smith   Mat_MPIDense *d = (Mat_MPIDense *)x->data;
126773a71a0fSBarry Smith 
126873a71a0fSBarry Smith   PetscFunctionBegin;
12699566063dSJacob Faibussowitsch   PetscCall(MatSetRandom(d->A, rctx));
127073a71a0fSBarry Smith   PetscFunctionReturn(0);
127173a71a0fSBarry Smith }
127273a71a0fSBarry Smith 
12739371c9d4SSatish Balay static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A, PetscBool *missing, PetscInt *d) {
12743b49f96aSBarry Smith   PetscFunctionBegin;
12753b49f96aSBarry Smith   *missing = PETSC_FALSE;
12763b49f96aSBarry Smith   PetscFunctionReturn(0);
12773b49f96aSBarry Smith }
12783b49f96aSBarry Smith 
12794222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat);
1280cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat);
12816718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat);
1282a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat);
12836718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat, Mat, PetscBool *);
12846718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat, PetscViewer);
1285cc48ffa7SToby Isaac 
12868965ea79SLois Curfman McInnes /* -------------------------------------------------------------------*/
128709dc0095SBarry Smith static struct _MatOps MatOps_Values = {MatSetValues_MPIDense,
128809dc0095SBarry Smith                                        MatGetRow_MPIDense,
128909dc0095SBarry Smith                                        MatRestoreRow_MPIDense,
129009dc0095SBarry Smith                                        MatMult_MPIDense,
129197304618SKris Buschelman                                        /*  4*/ MatMultAdd_MPIDense,
12927c922b88SBarry Smith                                        MatMultTranspose_MPIDense,
12937c922b88SBarry Smith                                        MatMultTransposeAdd_MPIDense,
1294f4259b30SLisandro Dalcin                                        NULL,
1295f4259b30SLisandro Dalcin                                        NULL,
1296f4259b30SLisandro Dalcin                                        NULL,
1297f4259b30SLisandro Dalcin                                        /* 10*/ NULL,
1298f4259b30SLisandro Dalcin                                        NULL,
1299f4259b30SLisandro Dalcin                                        NULL,
1300f4259b30SLisandro Dalcin                                        NULL,
130109dc0095SBarry Smith                                        MatTranspose_MPIDense,
130297304618SKris Buschelman                                        /* 15*/ MatGetInfo_MPIDense,
13036e4ee0c6SHong Zhang                                        MatEqual_MPIDense,
130409dc0095SBarry Smith                                        MatGetDiagonal_MPIDense,
13055b2fa520SLois Curfman McInnes                                        MatDiagonalScale_MPIDense,
130609dc0095SBarry Smith                                        MatNorm_MPIDense,
130797304618SKris Buschelman                                        /* 20*/ MatAssemblyBegin_MPIDense,
130809dc0095SBarry Smith                                        MatAssemblyEnd_MPIDense,
130909dc0095SBarry Smith                                        MatSetOption_MPIDense,
131009dc0095SBarry Smith                                        MatZeroEntries_MPIDense,
1311d519adbfSMatthew Knepley                                        /* 24*/ MatZeroRows_MPIDense,
1312f4259b30SLisandro Dalcin                                        NULL,
1313f4259b30SLisandro Dalcin                                        NULL,
1314f4259b30SLisandro Dalcin                                        NULL,
1315f4259b30SLisandro Dalcin                                        NULL,
13164994cf47SJed Brown                                        /* 29*/ MatSetUp_MPIDense,
1317f4259b30SLisandro Dalcin                                        NULL,
1318f4259b30SLisandro Dalcin                                        NULL,
1319c56a70eeSBarry Smith                                        MatGetDiagonalBlock_MPIDense,
1320f4259b30SLisandro Dalcin                                        NULL,
1321d519adbfSMatthew Knepley                                        /* 34*/ MatDuplicate_MPIDense,
1322f4259b30SLisandro Dalcin                                        NULL,
1323f4259b30SLisandro Dalcin                                        NULL,
1324f4259b30SLisandro Dalcin                                        NULL,
1325f4259b30SLisandro Dalcin                                        NULL,
1326d519adbfSMatthew Knepley                                        /* 39*/ MatAXPY_MPIDense,
13277dae84e0SHong Zhang                                        MatCreateSubMatrices_MPIDense,
1328f4259b30SLisandro Dalcin                                        NULL,
132909dc0095SBarry Smith                                        MatGetValues_MPIDense,
1330a76f77c3SStefano Zampini                                        MatCopy_MPIDense,
1331f4259b30SLisandro Dalcin                                        /* 44*/ NULL,
133209dc0095SBarry Smith                                        MatScale_MPIDense,
13332f605a99SJose E. Roman                                        MatShift_MPIDense,
1334f4259b30SLisandro Dalcin                                        NULL,
1335f4259b30SLisandro Dalcin                                        NULL,
133673a71a0fSBarry Smith                                        /* 49*/ MatSetRandom_MPIDense,
1337f4259b30SLisandro Dalcin                                        NULL,
1338f4259b30SLisandro Dalcin                                        NULL,
1339f4259b30SLisandro Dalcin                                        NULL,
1340f4259b30SLisandro Dalcin                                        NULL,
1341f4259b30SLisandro Dalcin                                        /* 54*/ NULL,
1342f4259b30SLisandro Dalcin                                        NULL,
1343f4259b30SLisandro Dalcin                                        NULL,
1344f4259b30SLisandro Dalcin                                        NULL,
1345f4259b30SLisandro Dalcin                                        NULL,
13467dae84e0SHong Zhang                                        /* 59*/ MatCreateSubMatrix_MPIDense,
1347b9b97703SBarry Smith                                        MatDestroy_MPIDense,
1348b9b97703SBarry Smith                                        MatView_MPIDense,
1349f4259b30SLisandro Dalcin                                        NULL,
1350f4259b30SLisandro Dalcin                                        NULL,
1351f4259b30SLisandro Dalcin                                        /* 64*/ NULL,
1352f4259b30SLisandro Dalcin                                        NULL,
1353f4259b30SLisandro Dalcin                                        NULL,
1354f4259b30SLisandro Dalcin                                        NULL,
1355f4259b30SLisandro Dalcin                                        NULL,
1356f4259b30SLisandro Dalcin                                        /* 69*/ NULL,
1357f4259b30SLisandro Dalcin                                        NULL,
1358f4259b30SLisandro Dalcin                                        NULL,
1359f4259b30SLisandro Dalcin                                        NULL,
1360f4259b30SLisandro Dalcin                                        NULL,
1361f4259b30SLisandro Dalcin                                        /* 74*/ NULL,
1362f4259b30SLisandro Dalcin                                        NULL,
1363f4259b30SLisandro Dalcin                                        NULL,
1364f4259b30SLisandro Dalcin                                        NULL,
1365f4259b30SLisandro Dalcin                                        NULL,
1366f4259b30SLisandro Dalcin                                        /* 79*/ NULL,
1367f4259b30SLisandro Dalcin                                        NULL,
1368f4259b30SLisandro Dalcin                                        NULL,
1369f4259b30SLisandro Dalcin                                        NULL,
13705bba2384SShri Abhyankar                                        /* 83*/ MatLoad_MPIDense,
1371f4259b30SLisandro Dalcin                                        NULL,
1372f4259b30SLisandro Dalcin                                        NULL,
1373f4259b30SLisandro Dalcin                                        NULL,
1374f4259b30SLisandro Dalcin                                        NULL,
1375f4259b30SLisandro Dalcin                                        NULL,
1376f4259b30SLisandro Dalcin                                        /* 89*/ NULL,
1377f4259b30SLisandro Dalcin                                        NULL,
1378f4259b30SLisandro Dalcin                                        NULL,
1379f4259b30SLisandro Dalcin                                        NULL,
1380f4259b30SLisandro Dalcin                                        NULL,
1381f4259b30SLisandro Dalcin                                        /* 94*/ NULL,
1382f4259b30SLisandro Dalcin                                        NULL,
13836718818eSStefano Zampini                                        MatMatTransposeMultSymbolic_MPIDense_MPIDense,
1384cc48ffa7SToby Isaac                                        MatMatTransposeMultNumeric_MPIDense_MPIDense,
1385f4259b30SLisandro Dalcin                                        NULL,
13864222ddf1SHong Zhang                                        /* 99*/ MatProductSetFromOptions_MPIDense,
1387f4259b30SLisandro Dalcin                                        NULL,
1388f4259b30SLisandro Dalcin                                        NULL,
1389ba337c44SJed Brown                                        MatConjugate_MPIDense,
1390f4259b30SLisandro Dalcin                                        NULL,
1391f4259b30SLisandro Dalcin                                        /*104*/ NULL,
1392ba337c44SJed Brown                                        MatRealPart_MPIDense,
1393ba337c44SJed Brown                                        MatImaginaryPart_MPIDense,
1394f4259b30SLisandro Dalcin                                        NULL,
1395f4259b30SLisandro Dalcin                                        NULL,
1396f4259b30SLisandro Dalcin                                        /*109*/ NULL,
1397f4259b30SLisandro Dalcin                                        NULL,
1398f4259b30SLisandro Dalcin                                        NULL,
139949a6ff4bSBarry Smith                                        MatGetColumnVector_MPIDense,
14003b49f96aSBarry Smith                                        MatMissingDiagonal_MPIDense,
1401f4259b30SLisandro Dalcin                                        /*114*/ NULL,
1402f4259b30SLisandro Dalcin                                        NULL,
1403f4259b30SLisandro Dalcin                                        NULL,
1404f4259b30SLisandro Dalcin                                        NULL,
1405f4259b30SLisandro Dalcin                                        NULL,
1406f4259b30SLisandro Dalcin                                        /*119*/ NULL,
1407f4259b30SLisandro Dalcin                                        NULL,
1408f4259b30SLisandro Dalcin                                        NULL,
1409f4259b30SLisandro Dalcin                                        NULL,
1410f4259b30SLisandro Dalcin                                        NULL,
1411f4259b30SLisandro Dalcin                                        /*124*/ NULL,
1412a873a8cdSSam Reynolds                                        MatGetColumnReductions_MPIDense,
1413f4259b30SLisandro Dalcin                                        NULL,
1414f4259b30SLisandro Dalcin                                        NULL,
1415f4259b30SLisandro Dalcin                                        NULL,
1416f4259b30SLisandro Dalcin                                        /*129*/ NULL,
1417f4259b30SLisandro Dalcin                                        NULL,
14186718818eSStefano Zampini                                        MatTransposeMatMultSymbolic_MPIDense_MPIDense,
1419cb20be35SHong Zhang                                        MatTransposeMatMultNumeric_MPIDense_MPIDense,
1420f4259b30SLisandro Dalcin                                        NULL,
1421f4259b30SLisandro Dalcin                                        /*134*/ NULL,
1422f4259b30SLisandro Dalcin                                        NULL,
1423f4259b30SLisandro Dalcin                                        NULL,
1424f4259b30SLisandro Dalcin                                        NULL,
1425f4259b30SLisandro Dalcin                                        NULL,
1426f4259b30SLisandro Dalcin                                        /*139*/ NULL,
1427f4259b30SLisandro Dalcin                                        NULL,
1428f4259b30SLisandro Dalcin                                        NULL,
1429f4259b30SLisandro Dalcin                                        NULL,
1430f4259b30SLisandro Dalcin                                        NULL,
14314222ddf1SHong Zhang                                        MatCreateMPIMatConcatenateSeqMat_MPIDense,
1432f4259b30SLisandro Dalcin                                        /*145*/ NULL,
1433f4259b30SLisandro Dalcin                                        NULL,
143499a7f59eSMark Adams                                        NULL,
143599a7f59eSMark Adams                                        NULL,
14367fb60732SBarry Smith                                        NULL,
14379371c9d4SSatish Balay                                        /*150*/ NULL};
14388965ea79SLois Curfman McInnes 
14399371c9d4SSatish Balay PetscErrorCode MatMPIDenseSetPreallocation_MPIDense(Mat mat, PetscScalar *data) {
1440637a0070SStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)mat->data;
1441637a0070SStefano Zampini   PetscBool     iscuda;
1442a23d5eceSKris Buschelman 
1443a23d5eceSKris Buschelman   PetscFunctionBegin;
144428b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
14459566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(mat->rmap));
14469566063dSJacob Faibussowitsch   PetscCall(PetscLayoutSetUp(mat->cmap));
1447637a0070SStefano Zampini   if (!a->A) {
14489566063dSJacob Faibussowitsch     PetscCall(MatCreate(PETSC_COMM_SELF, &a->A));
14499566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)mat, (PetscObject)a->A));
14509566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(a->A, mat->rmap->n, mat->cmap->N, mat->rmap->n, mat->cmap->N));
1451637a0070SStefano Zampini   }
14529566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSECUDA, &iscuda));
14539566063dSJacob Faibussowitsch   PetscCall(MatSetType(a->A, iscuda ? MATSEQDENSECUDA : MATSEQDENSE));
14549566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseSetPreallocation(a->A, data));
1455637a0070SStefano Zampini   mat->preallocated = PETSC_TRUE;
14566f08ad05SPierre Jolivet   mat->assembled    = PETSC_TRUE;
1457a23d5eceSKris Buschelman   PetscFunctionReturn(0);
1458a23d5eceSKris Buschelman }
1459a23d5eceSKris Buschelman 
14609371c9d4SSatish Balay PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) {
14614e29119aSPierre Jolivet   Mat B, C;
14624e29119aSPierre Jolivet 
14634e29119aSPierre Jolivet   PetscFunctionBegin;
14649566063dSJacob Faibussowitsch   PetscCall(MatMPIAIJGetLocalMat(A, MAT_INITIAL_MATRIX, &C));
14659566063dSJacob Faibussowitsch   PetscCall(MatConvert_SeqAIJ_SeqDense(C, MATSEQDENSE, MAT_INITIAL_MATRIX, &B));
14669566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&C));
14674e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
14684e29119aSPierre Jolivet     C = *newmat;
14694e29119aSPierre Jolivet   } else C = NULL;
14709566063dSJacob Faibussowitsch   PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C));
14719566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&B));
14724e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
14739566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A, &C));
14744e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
14754e29119aSPierre Jolivet   PetscFunctionReturn(0);
14764e29119aSPierre Jolivet }
14774e29119aSPierre Jolivet 
14789371c9d4SSatish Balay PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) {
14794e29119aSPierre Jolivet   Mat B, C;
14804e29119aSPierre Jolivet 
14814e29119aSPierre Jolivet   PetscFunctionBegin;
14829566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLocalMatrix(A, &C));
14839566063dSJacob Faibussowitsch   PetscCall(MatConvert_SeqDense_SeqAIJ(C, MATSEQAIJ, MAT_INITIAL_MATRIX, &B));
14844e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
14854e29119aSPierre Jolivet     C = *newmat;
14864e29119aSPierre Jolivet   } else C = NULL;
14879566063dSJacob Faibussowitsch   PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C));
14889566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&B));
14894e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
14909566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A, &C));
14914e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
14924e29119aSPierre Jolivet   PetscFunctionReturn(0);
14934e29119aSPierre Jolivet }
14944e29119aSPierre Jolivet 
149565b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
14969371c9d4SSatish Balay PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) {
14978ea901baSHong Zhang   Mat          mat_elemental;
149832d7a744SHong Zhang   PetscScalar *v;
149932d7a744SHong Zhang   PetscInt     m = A->rmap->n, N = A->cmap->N, rstart = A->rmap->rstart, i, *rows, *cols;
15008ea901baSHong Zhang 
15018baccfbdSHong Zhang   PetscFunctionBegin;
1502378336b6SHong Zhang   if (reuse == MAT_REUSE_MATRIX) {
1503378336b6SHong Zhang     mat_elemental = *newmat;
15049566063dSJacob Faibussowitsch     PetscCall(MatZeroEntries(*newmat));
1505378336b6SHong Zhang   } else {
15069566063dSJacob Faibussowitsch     PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental));
15079566063dSJacob Faibussowitsch     PetscCall(MatSetSizes(mat_elemental, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N));
15089566063dSJacob Faibussowitsch     PetscCall(MatSetType(mat_elemental, MATELEMENTAL));
15099566063dSJacob Faibussowitsch     PetscCall(MatSetUp(mat_elemental));
15109566063dSJacob Faibussowitsch     PetscCall(MatSetOption(mat_elemental, MAT_ROW_ORIENTED, PETSC_FALSE));
1511378336b6SHong Zhang   }
1512378336b6SHong Zhang 
15139566063dSJacob Faibussowitsch   PetscCall(PetscMalloc2(m, &rows, N, &cols));
151432d7a744SHong Zhang   for (i = 0; i < N; i++) cols[i] = i;
151532d7a744SHong Zhang   for (i = 0; i < m; i++) rows[i] = rstart + i;
15168ea901baSHong Zhang 
1517637a0070SStefano Zampini   /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */
15189566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(A, &v));
15199566063dSJacob Faibussowitsch   PetscCall(MatSetValues(mat_elemental, m, rows, N, cols, v, ADD_VALUES));
15209566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY));
15219566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY));
15229566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(A, &v));
15239566063dSJacob Faibussowitsch   PetscCall(PetscFree2(rows, cols));
15248ea901baSHong Zhang 
1525511c6705SHong Zhang   if (reuse == MAT_INPLACE_MATRIX) {
15269566063dSJacob Faibussowitsch     PetscCall(MatHeaderReplace(A, &mat_elemental));
15278ea901baSHong Zhang   } else {
15288ea901baSHong Zhang     *newmat = mat_elemental;
15298ea901baSHong Zhang   }
15308baccfbdSHong Zhang   PetscFunctionReturn(0);
15318baccfbdSHong Zhang }
153265b80a83SHong Zhang #endif
15338baccfbdSHong Zhang 
15349371c9d4SSatish Balay static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A, PetscInt col, PetscScalar **vals) {
153586aefd0dSHong Zhang   Mat_MPIDense *mat = (Mat_MPIDense *)A->data;
153686aefd0dSHong Zhang 
153786aefd0dSHong Zhang   PetscFunctionBegin;
15389566063dSJacob Faibussowitsch   PetscCall(MatDenseGetColumn(mat->A, col, vals));
153986aefd0dSHong Zhang   PetscFunctionReturn(0);
154086aefd0dSHong Zhang }
154186aefd0dSHong Zhang 
15429371c9d4SSatish Balay static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A, PetscScalar **vals) {
154386aefd0dSHong Zhang   Mat_MPIDense *mat = (Mat_MPIDense *)A->data;
154486aefd0dSHong Zhang 
154586aefd0dSHong Zhang   PetscFunctionBegin;
15469566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreColumn(mat->A, vals));
154786aefd0dSHong Zhang   PetscFunctionReturn(0);
154886aefd0dSHong Zhang }
154986aefd0dSHong Zhang 
15509371c9d4SSatish Balay PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm, Mat inmat, PetscInt n, MatReuse scall, Mat *outmat) {
155194e2cb23SJakub Kruzik   Mat_MPIDense *mat;
155294e2cb23SJakub Kruzik   PetscInt      m, nloc, N;
155394e2cb23SJakub Kruzik 
155494e2cb23SJakub Kruzik   PetscFunctionBegin;
15559566063dSJacob Faibussowitsch   PetscCall(MatGetSize(inmat, &m, &N));
15569566063dSJacob Faibussowitsch   PetscCall(MatGetLocalSize(inmat, NULL, &nloc));
155794e2cb23SJakub Kruzik   if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */
155894e2cb23SJakub Kruzik     PetscInt sum;
155994e2cb23SJakub Kruzik 
156048a46eb9SPierre Jolivet     if (n == PETSC_DECIDE) PetscCall(PetscSplitOwnership(comm, &n, &N));
156194e2cb23SJakub Kruzik     /* Check sum(n) = N */
15621c2dc1cbSBarry Smith     PetscCall(MPIU_Allreduce(&n, &sum, 1, MPIU_INT, MPI_SUM, comm));
156308401ef6SPierre Jolivet     PetscCheck(sum == N, PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT, sum, N);
156494e2cb23SJakub Kruzik 
15659566063dSJacob Faibussowitsch     PetscCall(MatCreateDense(comm, m, n, PETSC_DETERMINE, N, NULL, outmat));
15669566063dSJacob Faibussowitsch     PetscCall(MatSetOption(*outmat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE));
156794e2cb23SJakub Kruzik   }
156894e2cb23SJakub Kruzik 
156994e2cb23SJakub Kruzik   /* numeric phase */
157094e2cb23SJakub Kruzik   mat = (Mat_MPIDense *)(*outmat)->data;
15719566063dSJacob Faibussowitsch   PetscCall(MatCopy(inmat, mat->A, SAME_NONZERO_PATTERN));
157294e2cb23SJakub Kruzik   PetscFunctionReturn(0);
157394e2cb23SJakub Kruzik }
157494e2cb23SJakub Kruzik 
1575637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
15769371c9d4SSatish Balay PetscErrorCode MatConvert_MPIDenseCUDA_MPIDense(Mat M, MatType type, MatReuse reuse, Mat *newmat) {
1577637a0070SStefano Zampini   Mat           B;
1578637a0070SStefano Zampini   Mat_MPIDense *m;
1579637a0070SStefano Zampini 
1580637a0070SStefano Zampini   PetscFunctionBegin;
1581637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
15829566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(M, MAT_COPY_VALUES, newmat));
1583637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
15849566063dSJacob Faibussowitsch     PetscCall(MatCopy(M, *newmat, SAME_NONZERO_PATTERN));
1585637a0070SStefano Zampini   }
1586637a0070SStefano Zampini 
1587637a0070SStefano Zampini   B = *newmat;
15889566063dSJacob Faibussowitsch   PetscCall(MatBindToCPU_MPIDenseCUDA(B, PETSC_TRUE));
15899566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->defaultvectype));
15909566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(VECSTANDARD, &B->defaultvectype));
15919566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)B, MATMPIDENSE));
15929566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatConvert_mpidensecuda_mpidense_C", NULL));
15939566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL));
15949566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL));
15959566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL));
15969566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL));
15979566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArray_C", NULL));
15989566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArrayRead_C", NULL));
15999566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArrayWrite_C", NULL));
16009566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArray_C", NULL));
16019566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArrayRead_C", NULL));
16029566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArrayWrite_C", NULL));
16039566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAPlaceArray_C", NULL));
16049566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAResetArray_C", NULL));
16059566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAReplaceArray_C", NULL));
1606637a0070SStefano Zampini   m = (Mat_MPIDense *)(B)->data;
160748a46eb9SPierre Jolivet   if (m->A) PetscCall(MatConvert(m->A, MATSEQDENSE, MAT_INPLACE_MATRIX, &m->A));
1608637a0070SStefano Zampini   B->ops->bindtocpu = NULL;
1609637a0070SStefano Zampini   B->offloadmask    = PETSC_OFFLOAD_CPU;
1610637a0070SStefano Zampini   PetscFunctionReturn(0);
1611637a0070SStefano Zampini }
1612637a0070SStefano Zampini 
16139371c9d4SSatish Balay PetscErrorCode MatConvert_MPIDense_MPIDenseCUDA(Mat M, MatType type, MatReuse reuse, Mat *newmat) {
1614637a0070SStefano Zampini   Mat           B;
1615637a0070SStefano Zampini   Mat_MPIDense *m;
1616637a0070SStefano Zampini 
1617637a0070SStefano Zampini   PetscFunctionBegin;
1618637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
16199566063dSJacob Faibussowitsch     PetscCall(MatDuplicate(M, MAT_COPY_VALUES, newmat));
1620637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
16219566063dSJacob Faibussowitsch     PetscCall(MatCopy(M, *newmat, SAME_NONZERO_PATTERN));
1622637a0070SStefano Zampini   }
1623637a0070SStefano Zampini 
1624637a0070SStefano Zampini   B = *newmat;
16259566063dSJacob Faibussowitsch   PetscCall(PetscFree(B->defaultvectype));
16269566063dSJacob Faibussowitsch   PetscCall(PetscStrallocpy(VECCUDA, &B->defaultvectype));
16279566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)B, MATMPIDENSECUDA));
16289566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatConvert_mpidensecuda_mpidense_C", MatConvert_MPIDenseCUDA_MPIDense));
16299566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", MatProductSetFromOptions_MPIAIJ_MPIDense));
16309566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", MatProductSetFromOptions_MPIAIJ_MPIDense));
16319566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ));
16329566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ));
16339566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArray_C", MatDenseCUDAGetArray_MPIDenseCUDA));
16349566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArrayRead_C", MatDenseCUDAGetArrayRead_MPIDenseCUDA));
16359566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAGetArrayWrite_C", MatDenseCUDAGetArrayWrite_MPIDenseCUDA));
16369566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArray_C", MatDenseCUDARestoreArray_MPIDenseCUDA));
16379566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArrayRead_C", MatDenseCUDARestoreArrayRead_MPIDenseCUDA));
16389566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDARestoreArrayWrite_C", MatDenseCUDARestoreArrayWrite_MPIDenseCUDA));
16399566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAPlaceArray_C", MatDenseCUDAPlaceArray_MPIDenseCUDA));
16409566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAResetArray_C", MatDenseCUDAResetArray_MPIDenseCUDA));
16419566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)B, "MatDenseCUDAReplaceArray_C", MatDenseCUDAReplaceArray_MPIDenseCUDA));
1642f5ff9c66SStefano Zampini   m = (Mat_MPIDense *)(B->data);
1643637a0070SStefano Zampini   if (m->A) {
16449566063dSJacob Faibussowitsch     PetscCall(MatConvert(m->A, MATSEQDENSECUDA, MAT_INPLACE_MATRIX, &m->A));
1645637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_BOTH;
1646637a0070SStefano Zampini   } else {
1647637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_UNALLOCATED;
1648637a0070SStefano Zampini   }
16499566063dSJacob Faibussowitsch   PetscCall(MatBindToCPU_MPIDenseCUDA(B, PETSC_FALSE));
1650637a0070SStefano Zampini 
1651637a0070SStefano Zampini   B->ops->bindtocpu = MatBindToCPU_MPIDenseCUDA;
1652637a0070SStefano Zampini   PetscFunctionReturn(0);
1653637a0070SStefano Zampini }
1654637a0070SStefano Zampini #endif
1655637a0070SStefano Zampini 
16569371c9d4SSatish Balay PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) {
16576947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
16586947451fSStefano Zampini   PetscInt      lda;
16596947451fSStefano Zampini 
16606947451fSStefano Zampini   PetscFunctionBegin;
166128b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
166228b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
166348a46eb9SPierre Jolivet   if (!a->cvec) PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec));
16646947451fSStefano Zampini   a->vecinuse = col + 1;
16659566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A, &lda));
16669566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArray(a->A, (PetscScalar **)&a->ptrinuse));
16679566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda));
16686947451fSStefano Zampini   *v = a->cvec;
16696947451fSStefano Zampini   PetscFunctionReturn(0);
16706947451fSStefano Zampini }
16716947451fSStefano Zampini 
16729371c9d4SSatish Balay PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) {
16736947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
16746947451fSStefano Zampini 
16756947451fSStefano Zampini   PetscFunctionBegin;
167628b400f6SJacob Faibussowitsch   PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first");
167728b400f6SJacob Faibussowitsch   PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector");
16786947451fSStefano Zampini   a->vecinuse = 0;
16799566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArray(a->A, (PetscScalar **)&a->ptrinuse));
16809566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
1681742765d3SMatthew Knepley   if (v) *v = NULL;
16826947451fSStefano Zampini   PetscFunctionReturn(0);
16836947451fSStefano Zampini }
16846947451fSStefano Zampini 
16859371c9d4SSatish Balay PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) {
16866947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
16876947451fSStefano Zampini   PetscInt      lda;
16886947451fSStefano Zampini 
16896947451fSStefano Zampini   PetscFunctionBegin;
169028b400f6SJacob Faibussowitsch   PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
169128b400f6SJacob Faibussowitsch   PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
169248a46eb9SPierre Jolivet   if (!a->cvec) PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec));
16936947451fSStefano Zampini   a->vecinuse = col + 1;
16949566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A, &lda));
16959566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A, &a->ptrinuse));
16969566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda));
16979566063dSJacob Faibussowitsch   PetscCall(VecLockReadPush(a->cvec));
16986947451fSStefano Zampini   *v = a->cvec;
16996947451fSStefano Zampini   PetscFunctionReturn(0);
17006947451fSStefano Zampini }
17016947451fSStefano Zampini 
17029371c9d4SSatish Balay PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) {
17036947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
17046947451fSStefano Zampini 
17056947451fSStefano Zampini   PetscFunctionBegin;
17065f80ce2aSJacob Faibussowitsch   PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first");
17075f80ce2aSJacob Faibussowitsch   PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector");
17086947451fSStefano Zampini   a->vecinuse = 0;
17099566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A, &a->ptrinuse));
17109566063dSJacob Faibussowitsch   PetscCall(VecLockReadPop(a->cvec));
17119566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
1712742765d3SMatthew Knepley   if (v) *v = NULL;
17136947451fSStefano Zampini   PetscFunctionReturn(0);
17146947451fSStefano Zampini }
17156947451fSStefano Zampini 
17169371c9d4SSatish Balay PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) {
17176947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
17186947451fSStefano Zampini   PetscInt      lda;
17196947451fSStefano Zampini 
17206947451fSStefano Zampini   PetscFunctionBegin;
17215f80ce2aSJacob Faibussowitsch   PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
17225f80ce2aSJacob Faibussowitsch   PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
172348a46eb9SPierre Jolivet   if (!a->cvec) PetscCall(VecCreateMPIWithArray(PetscObjectComm((PetscObject)A), A->rmap->bs, A->rmap->n, A->rmap->N, NULL, &a->cvec));
17246947451fSStefano Zampini   a->vecinuse = col + 1;
17259566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A, &lda));
17269566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse));
17279566063dSJacob Faibussowitsch   PetscCall(VecPlaceArray(a->cvec, a->ptrinuse + (size_t)col * (size_t)lda));
17286947451fSStefano Zampini   *v = a->cvec;
17296947451fSStefano Zampini   PetscFunctionReturn(0);
17306947451fSStefano Zampini }
17316947451fSStefano Zampini 
17329371c9d4SSatish Balay PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) {
17336947451fSStefano Zampini   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
17346947451fSStefano Zampini 
17356947451fSStefano Zampini   PetscFunctionBegin;
17365f80ce2aSJacob Faibussowitsch   PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first");
17375f80ce2aSJacob Faibussowitsch   PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector");
17386947451fSStefano Zampini   a->vecinuse = 0;
17399566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse));
17409566063dSJacob Faibussowitsch   PetscCall(VecResetArray(a->cvec));
1741742765d3SMatthew Knepley   if (v) *v = NULL;
17426947451fSStefano Zampini   PetscFunctionReturn(0);
17436947451fSStefano Zampini }
17446947451fSStefano Zampini 
17459371c9d4SSatish Balay PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A, PetscInt rbegin, PetscInt rend, PetscInt cbegin, PetscInt cend, Mat *v) {
17465ea7661aSPierre Jolivet   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1747616b8fbbSStefano Zampini   Mat_MPIDense *c;
1748616b8fbbSStefano Zampini   MPI_Comm      comm;
1749a2748737SPierre Jolivet   PetscInt      pbegin, pend;
17505ea7661aSPierre Jolivet 
17515ea7661aSPierre Jolivet   PetscFunctionBegin;
17529566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
17535f80ce2aSJacob Faibussowitsch   PetscCheck(!a->vecinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first");
17545f80ce2aSJacob Faibussowitsch   PetscCheck(!a->matinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
1755a2748737SPierre Jolivet   pbegin = PetscMax(0, PetscMin(A->rmap->rend, rbegin) - A->rmap->rstart);
1756a2748737SPierre Jolivet   pend   = PetscMin(A->rmap->n, PetscMax(0, rend - A->rmap->rstart));
17575ea7661aSPierre Jolivet   if (!a->cmat) {
17589566063dSJacob Faibussowitsch     PetscCall(MatCreate(comm, &a->cmat));
17599566063dSJacob Faibussowitsch     PetscCall(PetscLogObjectParent((PetscObject)A, (PetscObject)a->cmat));
17609566063dSJacob Faibussowitsch     PetscCall(MatSetType(a->cmat, ((PetscObject)A)->type_name));
1761a2748737SPierre Jolivet     if (rend - rbegin == A->rmap->N) PetscCall(PetscLayoutReference(A->rmap, &a->cmat->rmap));
1762a2748737SPierre Jolivet     else {
1763a2748737SPierre Jolivet       PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, pend - pbegin));
1764a2748737SPierre Jolivet       PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin));
1765a2748737SPierre Jolivet       PetscCall(PetscLayoutSetUp(a->cmat->rmap));
1766a2748737SPierre Jolivet     }
17679566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin));
17689566063dSJacob Faibussowitsch     PetscCall(PetscLayoutSetUp(a->cmat->cmap));
1769a2748737SPierre Jolivet   } else {
1770a2748737SPierre Jolivet     PetscBool same = (PetscBool)(rend - rbegin == a->cmat->rmap->N);
1771a2748737SPierre Jolivet     if (same && a->cmat->rmap->N != A->rmap->N) {
1772a2748737SPierre Jolivet       same = (PetscBool)(pend - pbegin == a->cmat->rmap->n);
1773a2748737SPierre Jolivet       PetscCall(MPIU_Allreduce(MPI_IN_PLACE, &same, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A)));
1774a2748737SPierre Jolivet     }
1775a2748737SPierre Jolivet     if (!same) {
1776a2748737SPierre Jolivet       PetscCall(PetscLayoutDestroy(&a->cmat->rmap));
1777a2748737SPierre Jolivet       PetscCall(PetscLayoutCreate(comm, &a->cmat->rmap));
1778a2748737SPierre Jolivet       PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, pend - pbegin));
1779a2748737SPierre Jolivet       PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin));
1780a2748737SPierre Jolivet       PetscCall(PetscLayoutSetUp(a->cmat->rmap));
1781a2748737SPierre Jolivet     }
1782a2748737SPierre Jolivet     if (cend - cbegin != a->cmat->cmap->N) {
17839566063dSJacob Faibussowitsch       PetscCall(PetscLayoutDestroy(&a->cmat->cmap));
17849566063dSJacob Faibussowitsch       PetscCall(PetscLayoutCreate(comm, &a->cmat->cmap));
17859566063dSJacob Faibussowitsch       PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin));
17869566063dSJacob Faibussowitsch       PetscCall(PetscLayoutSetUp(a->cmat->cmap));
17875ea7661aSPierre Jolivet     }
1788a2748737SPierre Jolivet   }
1789616b8fbbSStefano Zampini   c = (Mat_MPIDense *)a->cmat->data;
17905f80ce2aSJacob Faibussowitsch   PetscCheck(!c->A, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first");
1791a2748737SPierre Jolivet   PetscCall(MatDenseGetSubMatrix(a->A, pbegin, pend, cbegin, cend, &c->A));
1792616b8fbbSStefano Zampini   a->cmat->preallocated = PETSC_TRUE;
1793616b8fbbSStefano Zampini   a->cmat->assembled    = PETSC_TRUE;
17945ea7661aSPierre Jolivet   a->matinuse           = cbegin + 1;
17955ea7661aSPierre Jolivet   *v                    = a->cmat;
17965ea7661aSPierre Jolivet   PetscFunctionReturn(0);
17975ea7661aSPierre Jolivet }
17985ea7661aSPierre Jolivet 
17999371c9d4SSatish Balay PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A, Mat *v) {
18005ea7661aSPierre Jolivet   Mat_MPIDense *a = (Mat_MPIDense *)A->data;
1801616b8fbbSStefano Zampini   Mat_MPIDense *c;
18025ea7661aSPierre Jolivet 
18035ea7661aSPierre Jolivet   PetscFunctionBegin;
18045f80ce2aSJacob Faibussowitsch   PetscCheck(a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetSubMatrix() first");
18055f80ce2aSJacob Faibussowitsch   PetscCheck(a->cmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal matrix");
18065f80ce2aSJacob Faibussowitsch   PetscCheck(*v == a->cmat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Not the matrix obtained from MatDenseGetSubMatrix()");
18075ea7661aSPierre Jolivet   a->matinuse = 0;
1808616b8fbbSStefano Zampini   c           = (Mat_MPIDense *)a->cmat->data;
18099566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreSubMatrix(a->A, &c->A));
1810742765d3SMatthew Knepley   if (v) *v = NULL;
18115ea7661aSPierre Jolivet   PetscFunctionReturn(0);
18125ea7661aSPierre Jolivet }
18135ea7661aSPierre Jolivet 
1814002bc6daSRichard Tran Mills /*MC
1815002bc6daSRichard Tran Mills    MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices.
1816002bc6daSRichard Tran Mills 
1817002bc6daSRichard Tran Mills    Options Database Keys:
1818002bc6daSRichard Tran Mills . -mat_type mpidense - sets the matrix type to "mpidense" during a call to MatSetFromOptions()
1819002bc6daSRichard Tran Mills 
1820002bc6daSRichard Tran Mills   Level: beginner
1821002bc6daSRichard Tran Mills 
1822db781477SPatrick Sanan .seealso: `MatCreateDense()`
1823002bc6daSRichard Tran Mills 
1824002bc6daSRichard Tran Mills M*/
18259371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode MatCreate_MPIDense(Mat mat) {
1826273d9f13SBarry Smith   Mat_MPIDense *a;
1827273d9f13SBarry Smith 
1828273d9f13SBarry Smith   PetscFunctionBegin;
18299566063dSJacob Faibussowitsch   PetscCall(PetscNewLog(mat, &a));
1830b0a32e0cSBarry Smith   mat->data = (void *)a;
18319566063dSJacob Faibussowitsch   PetscCall(PetscMemcpy(mat->ops, &MatOps_Values, sizeof(struct _MatOps)));
1832273d9f13SBarry Smith 
1833273d9f13SBarry Smith   mat->insertmode = NOT_SET_VALUES;
1834273d9f13SBarry Smith 
1835273d9f13SBarry Smith   /* build cache for off array entries formed */
1836273d9f13SBarry Smith   a->donotstash = PETSC_FALSE;
18372205254eSKarl Rupp 
18389566063dSJacob Faibussowitsch   PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat), 1, &mat->stash));
1839273d9f13SBarry Smith 
1840273d9f13SBarry Smith   /* stuff used for matrix vector multiply */
1841f4259b30SLisandro Dalcin   a->lvec        = NULL;
1842f4259b30SLisandro Dalcin   a->Mvctx       = NULL;
1843273d9f13SBarry Smith   a->roworiented = PETSC_TRUE;
1844273d9f13SBarry Smith 
18459566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", MatDenseGetLDA_MPIDense));
18469566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", MatDenseSetLDA_MPIDense));
18479566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", MatDenseGetArray_MPIDense));
18489566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", MatDenseRestoreArray_MPIDense));
18499566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", MatDenseGetArrayRead_MPIDense));
18509566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", MatDenseRestoreArrayRead_MPIDense));
18519566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", MatDenseGetArrayWrite_MPIDense));
18529566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", MatDenseRestoreArrayWrite_MPIDense));
18539566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", MatDensePlaceArray_MPIDense));
18549566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", MatDenseResetArray_MPIDense));
18559566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", MatDenseReplaceArray_MPIDense));
18569566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense));
18579566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense));
18589566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense));
18599566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense));
18609566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense));
18619566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense));
18629566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", MatDenseGetSubMatrix_MPIDense));
18639566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", MatDenseRestoreSubMatrix_MPIDense));
18649566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", MatConvert_MPIAIJ_MPIDense));
18659566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", MatConvert_MPIDense_MPIAIJ));
18668baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
18679566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", MatConvert_MPIDense_Elemental));
18688baccfbdSHong Zhang #endif
1869d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
18709566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", MatConvert_Dense_ScaLAPACK));
1871d24d4204SJose E. Roman #endif
1872637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
18739566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", MatConvert_MPIDense_MPIDenseCUDA));
1874637a0070SStefano Zampini #endif
18759566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", MatMPIDenseSetPreallocation_MPIDense));
18769566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense));
18779566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ));
18786718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
18799566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense));
18809566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ));
18816718818eSStefano Zampini #endif
18828949adfdSHong Zhang 
18839566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", MatDenseGetColumn_MPIDense));
18849566063dSJacob Faibussowitsch   PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", MatDenseRestoreColumn_MPIDense));
18859566063dSJacob Faibussowitsch   PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATMPIDENSE));
1886273d9f13SBarry Smith   PetscFunctionReturn(0);
1887273d9f13SBarry Smith }
1888273d9f13SBarry Smith 
1889209238afSKris Buschelman /*MC
1890637a0070SStefano Zampini    MATMPIDENSECUDA - MATMPIDENSECUDA = "mpidensecuda" - A matrix type to be used for distributed dense matrices on GPUs.
1891637a0070SStefano Zampini 
1892637a0070SStefano Zampini    Options Database Keys:
1893637a0070SStefano Zampini . -mat_type mpidensecuda - sets the matrix type to "mpidensecuda" during a call to MatSetFromOptions()
1894637a0070SStefano Zampini 
1895637a0070SStefano Zampini   Level: beginner
1896637a0070SStefano Zampini 
1897637a0070SStefano Zampini .seealso:
1898637a0070SStefano Zampini 
1899637a0070SStefano Zampini M*/
1900637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1901a4af0ceeSJacob Faibussowitsch #include <petsc/private/deviceimpl.h>
19029371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode MatCreate_MPIDenseCUDA(Mat B) {
1903637a0070SStefano Zampini   PetscFunctionBegin;
19049566063dSJacob Faibussowitsch   PetscCall(PetscDeviceInitialize(PETSC_DEVICE_CUDA));
19059566063dSJacob Faibussowitsch   PetscCall(MatCreate_MPIDense(B));
19069566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_MPIDenseCUDA(B, MATMPIDENSECUDA, MAT_INPLACE_MATRIX, &B));
1907637a0070SStefano Zampini   PetscFunctionReturn(0);
1908637a0070SStefano Zampini }
1909637a0070SStefano Zampini #endif
1910637a0070SStefano Zampini 
1911637a0070SStefano Zampini /*MC
1912002d173eSKris Buschelman    MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices.
1913209238afSKris Buschelman 
1914209238afSKris Buschelman    This matrix type is identical to MATSEQDENSE when constructed with a single process communicator,
1915209238afSKris Buschelman    and MATMPIDENSE otherwise.
1916209238afSKris Buschelman 
1917209238afSKris Buschelman    Options Database Keys:
1918209238afSKris Buschelman . -mat_type dense - sets the matrix type to "dense" during a call to MatSetFromOptions()
1919209238afSKris Buschelman 
1920209238afSKris Buschelman   Level: beginner
1921209238afSKris Buschelman 
1922c2e3fba1SPatrick Sanan .seealso: `MATSEQDENSE`, `MATMPIDENSE`, `MATDENSECUDA`
19236947451fSStefano Zampini M*/
19246947451fSStefano Zampini 
19256947451fSStefano Zampini /*MC
19266947451fSStefano Zampini    MATDENSECUDA - MATDENSECUDA = "densecuda" - A matrix type to be used for dense matrices on GPUs.
19276947451fSStefano Zampini 
19286947451fSStefano Zampini    This matrix type is identical to MATSEQDENSECUDA when constructed with a single process communicator,
19296947451fSStefano Zampini    and MATMPIDENSECUDA otherwise.
19306947451fSStefano Zampini 
19316947451fSStefano Zampini    Options Database Keys:
19326947451fSStefano Zampini . -mat_type densecuda - sets the matrix type to "densecuda" during a call to MatSetFromOptions()
19336947451fSStefano Zampini 
19346947451fSStefano Zampini   Level: beginner
19356947451fSStefano Zampini 
1936c2e3fba1SPatrick Sanan .seealso: `MATSEQDENSECUDA`, `MATMPIDENSECUDA`, `MATDENSE`
1937209238afSKris Buschelman M*/
1938209238afSKris Buschelman 
1939273d9f13SBarry Smith /*@C
1940273d9f13SBarry Smith    MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries
1941273d9f13SBarry Smith 
19428f490ea3SStefano Zampini    Collective
1943273d9f13SBarry Smith 
1944273d9f13SBarry Smith    Input Parameters:
19451c4f3114SJed Brown .  B - the matrix
19460298fd71SBarry Smith -  data - optional location of matrix data.  Set data=NULL for PETSc
1947273d9f13SBarry Smith    to control all matrix memory allocation.
1948273d9f13SBarry Smith 
1949273d9f13SBarry Smith    Notes:
1950273d9f13SBarry Smith    The dense format is fully compatible with standard Fortran 77
1951273d9f13SBarry Smith    storage by columns.
1952273d9f13SBarry Smith 
1953273d9f13SBarry Smith    The data input variable is intended primarily for Fortran programmers
1954273d9f13SBarry Smith    who wish to allocate their own matrix memory space.  Most users should
19550298fd71SBarry Smith    set data=NULL.
1956273d9f13SBarry Smith 
1957273d9f13SBarry Smith    Level: intermediate
1958273d9f13SBarry Smith 
1959db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()`
1960273d9f13SBarry Smith @*/
19619371c9d4SSatish Balay PetscErrorCode MatMPIDenseSetPreallocation(Mat B, PetscScalar *data) {
1962273d9f13SBarry Smith   PetscFunctionBegin;
1963d5ea218eSStefano Zampini   PetscValidHeaderSpecific(B, MAT_CLASSID, 1);
1964cac4c232SBarry Smith   PetscTryMethod(B, "MatMPIDenseSetPreallocation_C", (Mat, PetscScalar *), (B, data));
1965273d9f13SBarry Smith   PetscFunctionReturn(0);
1966273d9f13SBarry Smith }
1967273d9f13SBarry Smith 
1968d3042a70SBarry Smith /*@
1969637a0070SStefano Zampini    MatDensePlaceArray - Allows one to replace the array in a dense matrix with an
1970d3042a70SBarry Smith    array provided by the user. This is useful to avoid copying an array
1971d3042a70SBarry Smith    into a matrix
1972d3042a70SBarry Smith 
1973d3042a70SBarry Smith    Not Collective
1974d3042a70SBarry Smith 
1975d3042a70SBarry Smith    Input Parameters:
1976d3042a70SBarry Smith +  mat - the matrix
1977d3042a70SBarry Smith -  array - the array in column major order
1978d3042a70SBarry Smith 
1979d3042a70SBarry Smith    Notes:
1980d3042a70SBarry Smith    You can return to the original array with a call to MatDenseResetArray(). The user is responsible for freeing this array; it will not be
1981d3042a70SBarry Smith    freed when the matrix is destroyed.
1982d3042a70SBarry Smith 
1983d3042a70SBarry Smith    Level: developer
1984d3042a70SBarry Smith 
1985db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`
1986d3042a70SBarry Smith 
1987d3042a70SBarry Smith @*/
19889371c9d4SSatish Balay PetscErrorCode MatDensePlaceArray(Mat mat, const PetscScalar *array) {
1989d3042a70SBarry Smith   PetscFunctionBegin;
1990d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
1991cac4c232SBarry Smith   PetscUseMethod(mat, "MatDensePlaceArray_C", (Mat, const PetscScalar *), (mat, array));
19929566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
1993637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1994637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
1995637a0070SStefano Zampini #endif
1996d3042a70SBarry Smith   PetscFunctionReturn(0);
1997d3042a70SBarry Smith }
1998d3042a70SBarry Smith 
1999d3042a70SBarry Smith /*@
2000d3042a70SBarry Smith    MatDenseResetArray - Resets the matrix array to that it previously had before the call to MatDensePlaceArray()
2001d3042a70SBarry Smith 
2002d3042a70SBarry Smith    Not Collective
2003d3042a70SBarry Smith 
2004d3042a70SBarry Smith    Input Parameters:
2005d3042a70SBarry Smith .  mat - the matrix
2006d3042a70SBarry Smith 
2007d3042a70SBarry Smith    Notes:
2008d3042a70SBarry Smith    You can only call this after a call to MatDensePlaceArray()
2009d3042a70SBarry Smith 
2010d3042a70SBarry Smith    Level: developer
2011d3042a70SBarry Smith 
2012db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`
2013d3042a70SBarry Smith 
2014d3042a70SBarry Smith @*/
20159371c9d4SSatish Balay PetscErrorCode MatDenseResetArray(Mat mat) {
2016d3042a70SBarry Smith   PetscFunctionBegin;
2017d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2018cac4c232SBarry Smith   PetscUseMethod(mat, "MatDenseResetArray_C", (Mat), (mat));
20199566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2020d3042a70SBarry Smith   PetscFunctionReturn(0);
2021d3042a70SBarry Smith }
2022d3042a70SBarry Smith 
2023d5ea218eSStefano Zampini /*@
2024d5ea218eSStefano Zampini    MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an
2025d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2026d5ea218eSStefano Zampini    into a matrix
2027d5ea218eSStefano Zampini 
2028d5ea218eSStefano Zampini    Not Collective
2029d5ea218eSStefano Zampini 
2030d5ea218eSStefano Zampini    Input Parameters:
2031d5ea218eSStefano Zampini +  mat - the matrix
2032d5ea218eSStefano Zampini -  array - the array in column major order
2033d5ea218eSStefano Zampini 
2034d5ea218eSStefano Zampini    Notes:
2035d5ea218eSStefano Zampini    The memory passed in MUST be obtained with PetscMalloc() and CANNOT be
2036d5ea218eSStefano Zampini    freed by the user. It will be freed when the matrix is destroyed.
2037d5ea218eSStefano Zampini 
2038d5ea218eSStefano Zampini    Level: developer
2039d5ea218eSStefano Zampini 
2040db781477SPatrick Sanan .seealso: `MatDenseGetArray()`, `VecReplaceArray()`
2041d5ea218eSStefano Zampini @*/
20429371c9d4SSatish Balay PetscErrorCode MatDenseReplaceArray(Mat mat, const PetscScalar *array) {
2043d5ea218eSStefano Zampini   PetscFunctionBegin;
2044d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2045cac4c232SBarry Smith   PetscUseMethod(mat, "MatDenseReplaceArray_C", (Mat, const PetscScalar *), (mat, array));
20469566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2047d5ea218eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
2048d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2049d5ea218eSStefano Zampini #endif
2050d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2051d5ea218eSStefano Zampini }
2052d5ea218eSStefano Zampini 
2053637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
20548965ea79SLois Curfman McInnes /*@C
2055637a0070SStefano Zampini    MatDenseCUDAPlaceArray - Allows one to replace the GPU array in a dense matrix with an
2056637a0070SStefano Zampini    array provided by the user. This is useful to avoid copying an array
2057637a0070SStefano Zampini    into a matrix
2058637a0070SStefano Zampini 
2059637a0070SStefano Zampini    Not Collective
2060637a0070SStefano Zampini 
2061637a0070SStefano Zampini    Input Parameters:
2062637a0070SStefano Zampini +  mat - the matrix
2063637a0070SStefano Zampini -  array - the array in column major order
2064637a0070SStefano Zampini 
2065637a0070SStefano Zampini    Notes:
2066637a0070SStefano Zampini    You can return to the original array with a call to MatDenseCUDAResetArray(). The user is responsible for freeing this array; it will not be
2067637a0070SStefano Zampini    freed when the matrix is destroyed. The array must have been allocated with cudaMalloc().
2068637a0070SStefano Zampini 
2069637a0070SStefano Zampini    Level: developer
2070637a0070SStefano Zampini 
2071db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAResetArray()`
2072637a0070SStefano Zampini @*/
20739371c9d4SSatish Balay PetscErrorCode MatDenseCUDAPlaceArray(Mat mat, const PetscScalar *array) {
2074637a0070SStefano Zampini   PetscFunctionBegin;
2075d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2076cac4c232SBarry Smith   PetscUseMethod(mat, "MatDenseCUDAPlaceArray_C", (Mat, const PetscScalar *), (mat, array));
20779566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2078637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2079637a0070SStefano Zampini   PetscFunctionReturn(0);
2080637a0070SStefano Zampini }
2081637a0070SStefano Zampini 
2082637a0070SStefano Zampini /*@C
2083637a0070SStefano Zampini    MatDenseCUDAResetArray - Resets the matrix array to that it previously had before the call to MatDenseCUDAPlaceArray()
2084637a0070SStefano Zampini 
2085637a0070SStefano Zampini    Not Collective
2086637a0070SStefano Zampini 
2087637a0070SStefano Zampini    Input Parameters:
2088637a0070SStefano Zampini .  mat - the matrix
2089637a0070SStefano Zampini 
2090637a0070SStefano Zampini    Notes:
2091637a0070SStefano Zampini    You can only call this after a call to MatDenseCUDAPlaceArray()
2092637a0070SStefano Zampini 
2093637a0070SStefano Zampini    Level: developer
2094637a0070SStefano Zampini 
2095db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAPlaceArray()`
2096637a0070SStefano Zampini 
2097637a0070SStefano Zampini @*/
20989371c9d4SSatish Balay PetscErrorCode MatDenseCUDAResetArray(Mat mat) {
2099637a0070SStefano Zampini   PetscFunctionBegin;
2100d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2101cac4c232SBarry Smith   PetscUseMethod(mat, "MatDenseCUDAResetArray_C", (Mat), (mat));
21029566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2103637a0070SStefano Zampini   PetscFunctionReturn(0);
2104637a0070SStefano Zampini }
2105637a0070SStefano Zampini 
2106637a0070SStefano Zampini /*@C
2107d5ea218eSStefano Zampini    MatDenseCUDAReplaceArray - Allows one to replace the GPU array in a dense matrix with an
2108d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2109d5ea218eSStefano Zampini    into a matrix
2110d5ea218eSStefano Zampini 
2111d5ea218eSStefano Zampini    Not Collective
2112d5ea218eSStefano Zampini 
2113d5ea218eSStefano Zampini    Input Parameters:
2114d5ea218eSStefano Zampini +  mat - the matrix
2115d5ea218eSStefano Zampini -  array - the array in column major order
2116d5ea218eSStefano Zampini 
2117d5ea218eSStefano Zampini    Notes:
2118d5ea218eSStefano Zampini    This permanently replaces the GPU array and frees the memory associated with the old GPU array.
2119d5ea218eSStefano Zampini    The memory passed in CANNOT be freed by the user. It will be freed
2120d5ea218eSStefano Zampini    when the matrix is destroyed. The array should respect the matrix leading dimension.
2121d5ea218eSStefano Zampini 
2122d5ea218eSStefano Zampini    Level: developer
2123d5ea218eSStefano Zampini 
2124db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDAPlaceArray()`, `MatDenseCUDAResetArray()`
2125d5ea218eSStefano Zampini @*/
21269371c9d4SSatish Balay PetscErrorCode MatDenseCUDAReplaceArray(Mat mat, const PetscScalar *array) {
2127d5ea218eSStefano Zampini   PetscFunctionBegin;
2128d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat, MAT_CLASSID, 1);
2129cac4c232SBarry Smith   PetscUseMethod(mat, "MatDenseCUDAReplaceArray_C", (Mat, const PetscScalar *), (mat, array));
21309566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)mat));
2131d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2132d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2133d5ea218eSStefano Zampini }
2134d5ea218eSStefano Zampini 
2135d5ea218eSStefano Zampini /*@C
2136637a0070SStefano Zampini    MatDenseCUDAGetArrayWrite - Provides write access to the CUDA buffer inside a dense matrix.
2137637a0070SStefano Zampini 
2138637a0070SStefano Zampini    Not Collective
2139637a0070SStefano Zampini 
2140637a0070SStefano Zampini    Input Parameters:
2141637a0070SStefano Zampini .  A - the matrix
2142637a0070SStefano Zampini 
2143637a0070SStefano Zampini    Output Parameters
2144637a0070SStefano Zampini .  array - the GPU array in column major order
2145637a0070SStefano Zampini 
2146637a0070SStefano Zampini    Notes:
2147637a0070SStefano Zampini    The data on the GPU may not be updated due to operations done on the CPU. If you need updated data, use MatDenseCUDAGetArray(). The array must be restored with MatDenseCUDARestoreArrayWrite() when no longer needed.
2148637a0070SStefano Zampini 
2149637a0070SStefano Zampini    Level: developer
2150637a0070SStefano Zampini 
2151db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayRead()`, `MatDenseCUDARestoreArrayRead()`
2152637a0070SStefano Zampini @*/
21539371c9d4SSatish Balay PetscErrorCode MatDenseCUDAGetArrayWrite(Mat A, PetscScalar **a) {
2154637a0070SStefano Zampini   PetscFunctionBegin;
2155d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
2156cac4c232SBarry Smith   PetscUseMethod(A, "MatDenseCUDAGetArrayWrite_C", (Mat, PetscScalar **), (A, a));
21579566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2158637a0070SStefano Zampini   PetscFunctionReturn(0);
2159637a0070SStefano Zampini }
2160637a0070SStefano Zampini 
2161637a0070SStefano Zampini /*@C
2162637a0070SStefano Zampini    MatDenseCUDARestoreArrayWrite - Restore write access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArrayWrite().
2163637a0070SStefano Zampini 
2164637a0070SStefano Zampini    Not Collective
2165637a0070SStefano Zampini 
2166637a0070SStefano Zampini    Input Parameters:
2167637a0070SStefano Zampini +  A - the matrix
2168637a0070SStefano Zampini -  array - the GPU array in column major order
2169637a0070SStefano Zampini 
2170637a0070SStefano Zampini    Notes:
2171637a0070SStefano Zampini 
2172637a0070SStefano Zampini    Level: developer
2173637a0070SStefano Zampini 
2174db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`, `MatDenseCUDAGetArrayRead()`
2175637a0070SStefano Zampini @*/
21769371c9d4SSatish Balay PetscErrorCode MatDenseCUDARestoreArrayWrite(Mat A, PetscScalar **a) {
2177637a0070SStefano Zampini   PetscFunctionBegin;
2178d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
2179cac4c232SBarry Smith   PetscUseMethod(A, "MatDenseCUDARestoreArrayWrite_C", (Mat, PetscScalar **), (A, a));
21809566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2181637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2182637a0070SStefano Zampini   PetscFunctionReturn(0);
2183637a0070SStefano Zampini }
2184637a0070SStefano Zampini 
2185637a0070SStefano Zampini /*@C
2186637a0070SStefano Zampini    MatDenseCUDAGetArrayRead - Provides read-only access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArrayRead() when no longer needed.
2187637a0070SStefano Zampini 
2188637a0070SStefano Zampini    Not Collective
2189637a0070SStefano Zampini 
2190637a0070SStefano Zampini    Input Parameters:
2191637a0070SStefano Zampini .  A - the matrix
2192637a0070SStefano Zampini 
2193637a0070SStefano Zampini    Output Parameters
2194637a0070SStefano Zampini .  array - the GPU array in column major order
2195637a0070SStefano Zampini 
2196637a0070SStefano Zampini    Notes:
2197637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2198637a0070SStefano Zampini 
2199637a0070SStefano Zampini    Level: developer
2200637a0070SStefano Zampini 
2201db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`
2202637a0070SStefano Zampini @*/
22039371c9d4SSatish Balay PetscErrorCode MatDenseCUDAGetArrayRead(Mat A, const PetscScalar **a) {
2204637a0070SStefano Zampini   PetscFunctionBegin;
2205d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
2206cac4c232SBarry Smith   PetscUseMethod(A, "MatDenseCUDAGetArrayRead_C", (Mat, const PetscScalar **), (A, a));
2207637a0070SStefano Zampini   PetscFunctionReturn(0);
2208637a0070SStefano Zampini }
2209637a0070SStefano Zampini 
2210637a0070SStefano Zampini /*@C
2211637a0070SStefano Zampini    MatDenseCUDARestoreArrayRead - Restore read-only access to the CUDA buffer inside a dense matrix previously obtained with a call to MatDenseCUDAGetArrayRead().
2212637a0070SStefano Zampini 
2213637a0070SStefano Zampini    Not Collective
2214637a0070SStefano Zampini 
2215637a0070SStefano Zampini    Input Parameters:
2216637a0070SStefano Zampini +  A - the matrix
2217637a0070SStefano Zampini -  array - the GPU array in column major order
2218637a0070SStefano Zampini 
2219637a0070SStefano Zampini    Notes:
2220637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2221637a0070SStefano Zampini 
2222637a0070SStefano Zampini    Level: developer
2223637a0070SStefano Zampini 
2224db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDAGetArrayRead()`
2225637a0070SStefano Zampini @*/
22269371c9d4SSatish Balay PetscErrorCode MatDenseCUDARestoreArrayRead(Mat A, const PetscScalar **a) {
2227637a0070SStefano Zampini   PetscFunctionBegin;
2228cac4c232SBarry Smith   PetscUseMethod(A, "MatDenseCUDARestoreArrayRead_C", (Mat, const PetscScalar **), (A, a));
2229637a0070SStefano Zampini   PetscFunctionReturn(0);
2230637a0070SStefano Zampini }
2231637a0070SStefano Zampini 
2232637a0070SStefano Zampini /*@C
2233637a0070SStefano Zampini    MatDenseCUDAGetArray - Provides access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArray() when no longer needed.
2234637a0070SStefano Zampini 
2235637a0070SStefano Zampini    Not Collective
2236637a0070SStefano Zampini 
2237637a0070SStefano Zampini    Input Parameters:
2238637a0070SStefano Zampini .  A - the matrix
2239637a0070SStefano Zampini 
2240637a0070SStefano Zampini    Output Parameters
2241637a0070SStefano Zampini .  array - the GPU array in column major order
2242637a0070SStefano Zampini 
2243637a0070SStefano Zampini    Notes:
2244637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite(). For read-only access, use MatDenseCUDAGetArrayRead().
2245637a0070SStefano Zampini 
2246637a0070SStefano Zampini    Level: developer
2247637a0070SStefano Zampini 
2248db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArrayRead()`, `MatDenseCUDARestoreArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`
2249637a0070SStefano Zampini @*/
22509371c9d4SSatish Balay PetscErrorCode MatDenseCUDAGetArray(Mat A, PetscScalar **a) {
2251637a0070SStefano Zampini   PetscFunctionBegin;
2252d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
2253cac4c232SBarry Smith   PetscUseMethod(A, "MatDenseCUDAGetArray_C", (Mat, PetscScalar **), (A, a));
22549566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2255637a0070SStefano Zampini   PetscFunctionReturn(0);
2256637a0070SStefano Zampini }
2257637a0070SStefano Zampini 
2258637a0070SStefano Zampini /*@C
2259637a0070SStefano Zampini    MatDenseCUDARestoreArray - Restore access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArray().
2260637a0070SStefano Zampini 
2261637a0070SStefano Zampini    Not Collective
2262637a0070SStefano Zampini 
2263637a0070SStefano Zampini    Input Parameters:
2264637a0070SStefano Zampini +  A - the matrix
2265637a0070SStefano Zampini -  array - the GPU array in column major order
2266637a0070SStefano Zampini 
2267637a0070SStefano Zampini    Notes:
2268637a0070SStefano Zampini 
2269637a0070SStefano Zampini    Level: developer
2270637a0070SStefano Zampini 
2271db781477SPatrick Sanan .seealso: `MatDenseCUDAGetArray()`, `MatDenseCUDARestoreArrayWrite()`, `MatDenseCUDAGetArrayWrite()`, `MatDenseCUDARestoreArrayRead()`, `MatDenseCUDAGetArrayRead()`
2272637a0070SStefano Zampini @*/
22739371c9d4SSatish Balay PetscErrorCode MatDenseCUDARestoreArray(Mat A, PetscScalar **a) {
2274637a0070SStefano Zampini   PetscFunctionBegin;
2275d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A, MAT_CLASSID, 1);
2276cac4c232SBarry Smith   PetscUseMethod(A, "MatDenseCUDARestoreArray_C", (Mat, PetscScalar **), (A, a));
22779566063dSJacob Faibussowitsch   PetscCall(PetscObjectStateIncrease((PetscObject)A));
2278637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2279637a0070SStefano Zampini   PetscFunctionReturn(0);
2280637a0070SStefano Zampini }
2281637a0070SStefano Zampini #endif
2282637a0070SStefano Zampini 
2283637a0070SStefano Zampini /*@C
2284637a0070SStefano Zampini    MatCreateDense - Creates a matrix in dense format.
22858965ea79SLois Curfman McInnes 
2286d083f849SBarry Smith    Collective
2287db81eaa0SLois Curfman McInnes 
22888965ea79SLois Curfman McInnes    Input Parameters:
2289db81eaa0SLois Curfman McInnes +  comm - MPI communicator
22908965ea79SLois Curfman McInnes .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2291db81eaa0SLois Curfman McInnes .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
22928965ea79SLois Curfman McInnes .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2293db81eaa0SLois Curfman McInnes .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
22946cfe35ddSJose E. Roman -  data - optional location of matrix data.  Set data=NULL (PETSC_NULL_SCALAR for Fortran users) for PETSc
2295dfc5480cSLois Curfman McInnes    to control all matrix memory allocation.
22968965ea79SLois Curfman McInnes 
22978965ea79SLois Curfman McInnes    Output Parameter:
2298477f1c0bSLois Curfman McInnes .  A - the matrix
22998965ea79SLois Curfman McInnes 
2300b259b22eSLois Curfman McInnes    Notes:
230139ddd567SLois Curfman McInnes    The dense format is fully compatible with standard Fortran 77
230239ddd567SLois Curfman McInnes    storage by columns.
2303002bc6daSRichard Tran Mills    Note that, although local portions of the matrix are stored in column-major
2304002bc6daSRichard Tran Mills    order, the matrix is partitioned across MPI ranks by row.
23058965ea79SLois Curfman McInnes 
230618f449edSLois Curfman McInnes    The data input variable is intended primarily for Fortran programmers
230718f449edSLois Curfman McInnes    who wish to allocate their own matrix memory space.  Most users should
23086cfe35ddSJose E. Roman    set data=NULL (PETSC_NULL_SCALAR for Fortran users).
230918f449edSLois Curfman McInnes 
23108965ea79SLois Curfman McInnes    The user MUST specify either the local or global matrix dimensions
23118965ea79SLois Curfman McInnes    (possibly both).
23128965ea79SLois Curfman McInnes 
2313027ccd11SLois Curfman McInnes    Level: intermediate
2314027ccd11SLois Curfman McInnes 
2315db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()`
23168965ea79SLois Curfman McInnes @*/
23179371c9d4SSatish Balay PetscErrorCode MatCreateDense(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar *data, Mat *A) {
23183a40ed3dSBarry Smith   PetscFunctionBegin;
23199566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm, A));
23209566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A, m, n, M, N));
23216f08ad05SPierre Jolivet   PetscCall(MatSetType(*A, MATDENSE));
23229566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseSetPreallocation(*A, data));
23236f08ad05SPierre Jolivet   PetscCall(MatMPIDenseSetPreallocation(*A, data));
23243a40ed3dSBarry Smith   PetscFunctionReturn(0);
23258965ea79SLois Curfman McInnes }
23268965ea79SLois Curfman McInnes 
2327637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2328637a0070SStefano Zampini /*@C
2329637a0070SStefano Zampini    MatCreateDenseCUDA - Creates a matrix in dense format using CUDA.
2330637a0070SStefano Zampini 
2331637a0070SStefano Zampini    Collective
2332637a0070SStefano Zampini 
2333637a0070SStefano Zampini    Input Parameters:
2334637a0070SStefano Zampini +  comm - MPI communicator
2335637a0070SStefano Zampini .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2336637a0070SStefano Zampini .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
2337637a0070SStefano Zampini .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2338637a0070SStefano Zampini .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
2339637a0070SStefano Zampini -  data - optional location of GPU matrix data.  Set data=NULL for PETSc
2340637a0070SStefano Zampini    to control matrix memory allocation.
2341637a0070SStefano Zampini 
2342637a0070SStefano Zampini    Output Parameter:
2343637a0070SStefano Zampini .  A - the matrix
2344637a0070SStefano Zampini 
2345637a0070SStefano Zampini    Notes:
2346637a0070SStefano Zampini 
2347637a0070SStefano Zampini    Level: intermediate
2348637a0070SStefano Zampini 
2349db781477SPatrick Sanan .seealso: `MatCreate()`, `MatCreateDense()`
2350637a0070SStefano Zampini @*/
23519371c9d4SSatish Balay PetscErrorCode MatCreateDenseCUDA(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar *data, Mat *A) {
2352637a0070SStefano Zampini   PetscFunctionBegin;
23539566063dSJacob Faibussowitsch   PetscCall(MatCreate(comm, A));
2354637a0070SStefano Zampini   PetscValidLogicalCollectiveBool(*A, !!data, 6);
23559566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(*A, m, n, M, N));
23566f08ad05SPierre Jolivet   PetscCall(MatSetType(*A, MATDENSECUDA));
23579566063dSJacob Faibussowitsch   PetscCall(MatSeqDenseCUDASetPreallocation(*A, data));
23586f08ad05SPierre Jolivet   PetscCall(MatMPIDenseCUDASetPreallocation(*A, data));
2359637a0070SStefano Zampini   PetscFunctionReturn(0);
2360637a0070SStefano Zampini }
2361637a0070SStefano Zampini #endif
2362637a0070SStefano Zampini 
23639371c9d4SSatish Balay static PetscErrorCode MatDuplicate_MPIDense(Mat A, MatDuplicateOption cpvalues, Mat *newmat) {
23648965ea79SLois Curfman McInnes   Mat           mat;
23653501a2bdSLois Curfman McInnes   Mat_MPIDense *a, *oldmat = (Mat_MPIDense *)A->data;
23668965ea79SLois Curfman McInnes 
23673a40ed3dSBarry Smith   PetscFunctionBegin;
2368f4259b30SLisandro Dalcin   *newmat = NULL;
23699566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat));
23709566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(mat, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N));
23719566063dSJacob Faibussowitsch   PetscCall(MatSetType(mat, ((PetscObject)A)->type_name));
2372834f8fabSBarry Smith   a = (Mat_MPIDense *)mat->data;
23735aa7edbeSHong Zhang 
2374d5f3da31SBarry Smith   mat->factortype   = A->factortype;
2375c456f294SBarry Smith   mat->assembled    = PETSC_TRUE;
2376273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
23778965ea79SLois Curfman McInnes 
2378e0fa3b82SLois Curfman McInnes   mat->insertmode = NOT_SET_VALUES;
23793782ba37SSatish Balay   a->donotstash   = oldmat->donotstash;
2380e04c1aa4SHong Zhang 
23819566063dSJacob Faibussowitsch   PetscCall(PetscLayoutReference(A->rmap, &mat->rmap));
23829566063dSJacob Faibussowitsch   PetscCall(PetscLayoutReference(A->cmap, &mat->cmap));
23838965ea79SLois Curfman McInnes 
23849566063dSJacob Faibussowitsch   PetscCall(MatDuplicate(oldmat->A, cpvalues, &a->A));
23859566063dSJacob Faibussowitsch   PetscCall(PetscLogObjectParent((PetscObject)mat, (PetscObject)a->A));
238601b82886SBarry Smith 
23878965ea79SLois Curfman McInnes   *newmat = mat;
23883a40ed3dSBarry Smith   PetscFunctionReturn(0);
23898965ea79SLois Curfman McInnes }
23908965ea79SLois Curfman McInnes 
23919371c9d4SSatish Balay PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer) {
239287d5ce66SSatish Balay   PetscBool isbinary;
239387d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
239487d5ce66SSatish Balay   PetscBool ishdf5;
239587d5ce66SSatish Balay #endif
2396eb91f321SVaclav Hapla 
2397eb91f321SVaclav Hapla   PetscFunctionBegin;
2398eb91f321SVaclav Hapla   PetscValidHeaderSpecific(newMat, MAT_CLASSID, 1);
2399eb91f321SVaclav Hapla   PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2);
2400eb91f321SVaclav Hapla   /* force binary viewer to load .info file if it has not yet done so */
24019566063dSJacob Faibussowitsch   PetscCall(PetscViewerSetUp(viewer));
24029566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary));
240387d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
24049566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERHDF5, &ishdf5));
240587d5ce66SSatish Balay #endif
2406eb91f321SVaclav Hapla   if (isbinary) {
24079566063dSJacob Faibussowitsch     PetscCall(MatLoad_Dense_Binary(newMat, viewer));
2408eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5)
240987d5ce66SSatish Balay   } else if (ishdf5) {
24109566063dSJacob Faibussowitsch     PetscCall(MatLoad_Dense_HDF5(newMat, viewer));
2411eb91f321SVaclav Hapla #endif
241298921bdaSJacob Faibussowitsch   } else SETERRQ(PetscObjectComm((PetscObject)newMat), PETSC_ERR_SUP, "Viewer type %s not yet supported for reading %s matrices", ((PetscObject)viewer)->type_name, ((PetscObject)newMat)->type_name);
2413eb91f321SVaclav Hapla   PetscFunctionReturn(0);
2414eb91f321SVaclav Hapla }
2415eb91f321SVaclav Hapla 
24169371c9d4SSatish Balay static PetscErrorCode MatEqual_MPIDense(Mat A, Mat B, PetscBool *flag) {
24176e4ee0c6SHong Zhang   Mat_MPIDense *matB = (Mat_MPIDense *)B->data, *matA = (Mat_MPIDense *)A->data;
24186e4ee0c6SHong Zhang   Mat           a, b;
241990ace30eSBarry Smith 
24206e4ee0c6SHong Zhang   PetscFunctionBegin;
24216e4ee0c6SHong Zhang   a = matA->A;
24226e4ee0c6SHong Zhang   b = matB->A;
24232cf15c64SPierre Jolivet   PetscCall(MatEqual(a, b, flag));
24242cf15c64SPierre Jolivet   PetscCall(MPIU_Allreduce(MPI_IN_PLACE, flag, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A)));
24256e4ee0c6SHong Zhang   PetscFunctionReturn(0);
24266e4ee0c6SHong Zhang }
242790ace30eSBarry Smith 
24289371c9d4SSatish Balay PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data) {
24296718818eSStefano Zampini   Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data;
2430baa3c1c6SHong Zhang 
2431baa3c1c6SHong Zhang   PetscFunctionBegin;
24329566063dSJacob Faibussowitsch   PetscCall(PetscFree2(atb->sendbuf, atb->recvcounts));
24339566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&atb->atb));
24349566063dSJacob Faibussowitsch   PetscCall(PetscFree(atb));
2435baa3c1c6SHong Zhang   PetscFunctionReturn(0);
2436baa3c1c6SHong Zhang }
2437baa3c1c6SHong Zhang 
24389371c9d4SSatish Balay PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data) {
24396718818eSStefano Zampini   Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data;
2440cc48ffa7SToby Isaac 
2441cc48ffa7SToby Isaac   PetscFunctionBegin;
24429566063dSJacob Faibussowitsch   PetscCall(PetscFree2(abt->buf[0], abt->buf[1]));
24439566063dSJacob Faibussowitsch   PetscCall(PetscFree2(abt->recvcounts, abt->recvdispls));
24449566063dSJacob Faibussowitsch   PetscCall(PetscFree(abt));
2445cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2446cc48ffa7SToby Isaac }
2447cc48ffa7SToby Isaac 
24489371c9d4SSatish Balay static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) {
2449baa3c1c6SHong Zhang   Mat_MPIDense          *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data;
24506718818eSStefano Zampini   Mat_TransMatMultDense *atb;
2451cb20be35SHong Zhang   MPI_Comm               comm;
24526718818eSStefano Zampini   PetscMPIInt            size, *recvcounts;
24536718818eSStefano Zampini   PetscScalar           *carray, *sendbuf;
2454637a0070SStefano Zampini   const PetscScalar     *atbarray;
2455a1f9a5e6SStefano Zampini   PetscInt               i, cN = C->cmap->N, proc, k, j, lda;
2456e68c0b26SHong Zhang   const PetscInt        *ranges;
2457cb20be35SHong Zhang 
2458cb20be35SHong Zhang   PetscFunctionBegin;
24596718818eSStefano Zampini   MatCheckProduct(C, 3);
24605f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty");
24616718818eSStefano Zampini   atb        = (Mat_TransMatMultDense *)C->product->data;
24626718818eSStefano Zampini   recvcounts = atb->recvcounts;
24636718818eSStefano Zampini   sendbuf    = atb->sendbuf;
24646718818eSStefano Zampini 
24659566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
24669566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm, &size));
2467e68c0b26SHong Zhang 
2468c5ef1628SHong Zhang   /* compute atbarray = aseq^T * bseq */
24699566063dSJacob Faibussowitsch   PetscCall(MatTransposeMatMult(a->A, b->A, atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX, PETSC_DEFAULT, &atb->atb));
2470cb20be35SHong Zhang 
24719566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(C, &ranges));
2472cb20be35SHong Zhang 
2473660d5466SHong Zhang   /* arrange atbarray into sendbuf */
24749566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(atb->atb, &atbarray));
24759566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(atb->atb, &lda));
2476637a0070SStefano Zampini   for (proc = 0, k = 0; proc < size; proc++) {
2477baa3c1c6SHong Zhang     for (j = 0; j < cN; j++) {
2478a1f9a5e6SStefano Zampini       for (i = ranges[proc]; i < ranges[proc + 1]; i++) sendbuf[k++] = atbarray[i + j * lda];
2479cb20be35SHong Zhang     }
2480cb20be35SHong Zhang   }
24819566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(atb->atb, &atbarray));
2482637a0070SStefano Zampini 
2483c5ef1628SHong Zhang   /* sum all atbarray to local values of C */
24849566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A, &carray));
24859566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Reduce_scatter(sendbuf, carray, recvcounts, MPIU_SCALAR, MPIU_SUM, comm));
24869566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A, &carray));
24879566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY));
24889566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY));
2489cb20be35SHong Zhang   PetscFunctionReturn(0);
2490cb20be35SHong Zhang }
2491cb20be35SHong Zhang 
24929371c9d4SSatish Balay static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) {
2493cb20be35SHong Zhang   MPI_Comm               comm;
2494baa3c1c6SHong Zhang   PetscMPIInt            size;
2495660d5466SHong Zhang   PetscInt               cm = A->cmap->n, cM, cN = B->cmap->N;
2496baa3c1c6SHong Zhang   Mat_TransMatMultDense *atb;
24976718818eSStefano Zampini   PetscBool              cisdense;
24980acaeb71SStefano Zampini   PetscInt               i;
24990acaeb71SStefano Zampini   const PetscInt        *ranges;
2500cb20be35SHong Zhang 
2501cb20be35SHong Zhang   PetscFunctionBegin;
2502*8f83a4d9SJacob Faibussowitsch   MatCheckProduct(C, 4);
25035f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty");
25049566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
2505cb20be35SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) {
250698921bdaSJacob Faibussowitsch     SETERRQ(comm, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend);
2507cb20be35SHong Zhang   }
2508cb20be35SHong Zhang 
25094222ddf1SHong Zhang   /* create matrix product C */
25109566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C, cm, B->cmap->n, A->cmap->N, B->cmap->N));
25119566063dSJacob Faibussowitsch   PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSECUDA, ""));
251248a46eb9SPierre Jolivet   if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)A)->type_name));
25139566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
2514baa3c1c6SHong Zhang 
25154222ddf1SHong Zhang   /* create data structure for reuse C */
25169566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm, &size));
25179566063dSJacob Faibussowitsch   PetscCall(PetscNew(&atb));
25184222ddf1SHong Zhang   cM = C->rmap->N;
25199566063dSJacob Faibussowitsch   PetscCall(PetscMalloc2(cM * cN, &atb->sendbuf, size, &atb->recvcounts));
25209566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(C, &ranges));
25210acaeb71SStefano Zampini   for (i = 0; i < size; i++) atb->recvcounts[i] = (ranges[i + 1] - ranges[i]) * cN;
2522baa3c1c6SHong Zhang 
25236718818eSStefano Zampini   C->product->data    = atb;
25246718818eSStefano Zampini   C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense;
2525cb20be35SHong Zhang   PetscFunctionReturn(0);
2526cb20be35SHong Zhang }
2527cb20be35SHong Zhang 
25289371c9d4SSatish Balay static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) {
2529cc48ffa7SToby Isaac   MPI_Comm               comm;
2530cc48ffa7SToby Isaac   PetscMPIInt            i, size;
2531cc48ffa7SToby Isaac   PetscInt               maxRows, bufsiz;
2532cc48ffa7SToby Isaac   PetscMPIInt            tag;
25334222ddf1SHong Zhang   PetscInt               alg;
2534cc48ffa7SToby Isaac   Mat_MatTransMultDense *abt;
25354222ddf1SHong Zhang   Mat_Product           *product = C->product;
25364222ddf1SHong Zhang   PetscBool              flg;
2537cc48ffa7SToby Isaac 
2538cc48ffa7SToby Isaac   PetscFunctionBegin;
25396718818eSStefano Zampini   MatCheckProduct(C, 4);
25405f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty");
25414222ddf1SHong Zhang   /* check local size of A and B */
25425f80ce2aSJacob Faibussowitsch   PetscCheck(A->cmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")", A->cmap->n, B->cmap->n);
2543cc48ffa7SToby Isaac 
25449566063dSJacob Faibussowitsch   PetscCall(PetscStrcmp(product->alg, "allgatherv", &flg));
2545637a0070SStefano Zampini   alg = flg ? 0 : 1;
2546cc48ffa7SToby Isaac 
25474222ddf1SHong Zhang   /* setup matrix product C */
25489566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C, A->rmap->n, B->rmap->n, A->rmap->N, B->rmap->N));
25499566063dSJacob Faibussowitsch   PetscCall(MatSetType(C, MATMPIDENSE));
25509566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
25519566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetNewTag((PetscObject)C, &tag));
25524222ddf1SHong Zhang 
25534222ddf1SHong Zhang   /* create data structure for reuse C */
25549566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)C, &comm));
25559566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm, &size));
25569566063dSJacob Faibussowitsch   PetscCall(PetscNew(&abt));
2557cc48ffa7SToby Isaac   abt->tag = tag;
2558faa55883SToby Isaac   abt->alg = alg;
2559faa55883SToby Isaac   switch (alg) {
25604222ddf1SHong Zhang   case 1: /* alg: "cyclic" */
2561cc48ffa7SToby Isaac     for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i]));
2562cc48ffa7SToby Isaac     bufsiz = A->cmap->N * maxRows;
25639566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(bufsiz, &(abt->buf[0]), bufsiz, &(abt->buf[1])));
2564faa55883SToby Isaac     break;
25654222ddf1SHong Zhang   default: /* alg: "allgatherv" */
25669566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &(abt->buf[0]), B->rmap->N * B->cmap->N, &(abt->buf[1])));
25679566063dSJacob Faibussowitsch     PetscCall(PetscMalloc2(size, &(abt->recvcounts), size + 1, &(abt->recvdispls)));
2568faa55883SToby Isaac     for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N;
2569faa55883SToby Isaac     for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i];
2570faa55883SToby Isaac     break;
2571faa55883SToby Isaac   }
2572cc48ffa7SToby Isaac 
25736718818eSStefano Zampini   C->product->data                = abt;
25746718818eSStefano Zampini   C->product->destroy             = MatDestroy_MatMatTransMult_MPIDense_MPIDense;
25754222ddf1SHong Zhang   C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense;
2576cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2577cc48ffa7SToby Isaac }
2578cc48ffa7SToby Isaac 
25799371c9d4SSatish Balay static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C) {
2580cc48ffa7SToby Isaac   Mat_MPIDense          *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data;
25816718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2582cc48ffa7SToby Isaac   MPI_Comm               comm;
2583cc48ffa7SToby Isaac   PetscMPIInt            rank, size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom;
2584f4259b30SLisandro Dalcin   PetscScalar           *sendbuf, *recvbuf = NULL, *cv;
2585cc48ffa7SToby Isaac   PetscInt               i, cK             = A->cmap->N, k, j, bn;
2586cc48ffa7SToby Isaac   PetscScalar            _DOne = 1.0, _DZero = 0.0;
2587637a0070SStefano Zampini   const PetscScalar     *av, *bv;
258823fff9afSBarry Smith   PetscBLASInt           cm, cn, ck, alda, blda = 0, clda;
2589cc48ffa7SToby Isaac   MPI_Request            reqs[2];
2590cc48ffa7SToby Isaac   const PetscInt        *ranges;
2591cc48ffa7SToby Isaac 
2592cc48ffa7SToby Isaac   PetscFunctionBegin;
25936718818eSStefano Zampini   MatCheckProduct(C, 3);
25945f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty");
25956718818eSStefano Zampini   abt = (Mat_MatTransMultDense *)C->product->data;
25969566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)C, &comm));
25979566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_rank(comm, &rank));
25989566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm, &size));
25999566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A, &av));
26009566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(b->A, &bv));
26019566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A, &cv));
26029566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A, &i));
26039566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i, &alda));
26049566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(b->A, &i));
26059566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i, &blda));
26069566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(c->A, &i));
26079566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i, &clda));
26089566063dSJacob Faibussowitsch   PetscCall(MatGetOwnershipRanges(B, &ranges));
2609cc48ffa7SToby Isaac   bn = B->rmap->n;
2610637a0070SStefano Zampini   if (blda == bn) {
2611637a0070SStefano Zampini     sendbuf = (PetscScalar *)bv;
2612cc48ffa7SToby Isaac   } else {
2613cc48ffa7SToby Isaac     sendbuf = abt->buf[0];
2614cc48ffa7SToby Isaac     for (k = 0, i = 0; i < cK; i++) {
2615ad540459SPierre Jolivet       for (j = 0; j < bn; j++, k++) sendbuf[k] = bv[i * blda + j];
2616cc48ffa7SToby Isaac     }
2617cc48ffa7SToby Isaac   }
2618cc48ffa7SToby Isaac   if (size > 1) {
2619cc48ffa7SToby Isaac     sendto   = (rank + size - 1) % size;
2620cc48ffa7SToby Isaac     recvfrom = (rank + size + 1) % size;
2621cc48ffa7SToby Isaac   } else {
2622cc48ffa7SToby Isaac     sendto = recvfrom = 0;
2623cc48ffa7SToby Isaac   }
26249566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(cK, &ck));
26259566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm));
2626cc48ffa7SToby Isaac   recvisfrom = rank;
2627cc48ffa7SToby Isaac   for (i = 0; i < size; i++) {
2628cc48ffa7SToby Isaac     /* we have finished receiving in sending, bufs can be read/modified */
2629cc48ffa7SToby Isaac     PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */
2630cc48ffa7SToby Isaac     PetscInt nextbn         = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom];
2631cc48ffa7SToby Isaac 
2632cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2633cc48ffa7SToby Isaac       /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */
2634cc48ffa7SToby Isaac       sendsiz = cK * bn;
2635cc48ffa7SToby Isaac       recvsiz = cK * nextbn;
2636cc48ffa7SToby Isaac       recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1];
26379566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0]));
26389566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1]));
2639cc48ffa7SToby Isaac     }
2640cc48ffa7SToby Isaac 
2641cc48ffa7SToby Isaac     /* local aseq * sendbuf^T */
26429566063dSJacob Faibussowitsch     PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn));
2643792fecdfSBarry Smith     if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "T", &cm, &cn, &ck, &_DOne, av, &alda, sendbuf, &cn, &_DZero, cv + clda * ranges[recvisfrom], &clda));
2644cc48ffa7SToby Isaac 
2645cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2646cc48ffa7SToby Isaac       /* wait for the sends and receives to complete, swap sendbuf and recvbuf */
26479566063dSJacob Faibussowitsch       PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE));
2648cc48ffa7SToby Isaac     }
2649cc48ffa7SToby Isaac     bn         = nextbn;
2650cc48ffa7SToby Isaac     recvisfrom = nextrecvisfrom;
2651cc48ffa7SToby Isaac     sendbuf    = recvbuf;
2652cc48ffa7SToby Isaac   }
26539566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A, &av));
26549566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A, &bv));
26559566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A, &cv));
26569566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY));
26579566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY));
2658cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2659cc48ffa7SToby Isaac }
2660cc48ffa7SToby Isaac 
26619371c9d4SSatish Balay static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C) {
2662faa55883SToby Isaac   Mat_MPIDense          *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data;
26636718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2664faa55883SToby Isaac   MPI_Comm               comm;
2665637a0070SStefano Zampini   PetscMPIInt            size;
2666637a0070SStefano Zampini   PetscScalar           *cv, *sendbuf, *recvbuf;
2667637a0070SStefano Zampini   const PetscScalar     *av, *bv;
2668637a0070SStefano Zampini   PetscInt               blda, i, cK = A->cmap->N, k, j, bn;
2669faa55883SToby Isaac   PetscScalar            _DOne = 1.0, _DZero = 0.0;
2670637a0070SStefano Zampini   PetscBLASInt           cm, cn, ck, alda, clda;
2671faa55883SToby Isaac 
2672faa55883SToby Isaac   PetscFunctionBegin;
26736718818eSStefano Zampini   MatCheckProduct(C, 3);
26745f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty");
26756718818eSStefano Zampini   abt = (Mat_MatTransMultDense *)C->product->data;
26769566063dSJacob Faibussowitsch   PetscCall(PetscObjectGetComm((PetscObject)A, &comm));
26779566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Comm_size(comm, &size));
26789566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(a->A, &av));
26799566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayRead(b->A, &bv));
26809566063dSJacob Faibussowitsch   PetscCall(MatDenseGetArrayWrite(c->A, &cv));
26819566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(a->A, &i));
26829566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i, &alda));
26839566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(b->A, &blda));
26849566063dSJacob Faibussowitsch   PetscCall(MatDenseGetLDA(c->A, &i));
26859566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(i, &clda));
2686faa55883SToby Isaac   /* copy transpose of B into buf[0] */
2687faa55883SToby Isaac   bn      = B->rmap->n;
2688faa55883SToby Isaac   sendbuf = abt->buf[0];
2689faa55883SToby Isaac   recvbuf = abt->buf[1];
2690faa55883SToby Isaac   for (k = 0, j = 0; j < bn; j++) {
2691ad540459SPierre Jolivet     for (i = 0; i < cK; i++, k++) sendbuf[k] = bv[i * blda + j];
2692faa55883SToby Isaac   }
26939566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A, &bv));
26949566063dSJacob Faibussowitsch   PetscCallMPI(MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm));
26959566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(cK, &ck));
26969566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm));
26979566063dSJacob Faibussowitsch   PetscCall(PetscBLASIntCast(c->A->cmap->n, &cn));
2698792fecdfSBarry Smith   if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "N", &cm, &cn, &ck, &_DOne, av, &alda, recvbuf, &ck, &_DZero, cv, &clda));
26999566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(a->A, &av));
27009566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayRead(b->A, &bv));
27019566063dSJacob Faibussowitsch   PetscCall(MatDenseRestoreArrayWrite(c->A, &cv));
27029566063dSJacob Faibussowitsch   PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY));
27039566063dSJacob Faibussowitsch   PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY));
2704faa55883SToby Isaac   PetscFunctionReturn(0);
2705faa55883SToby Isaac }
2706faa55883SToby Isaac 
27079371c9d4SSatish Balay static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) {
27086718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2709faa55883SToby Isaac 
2710faa55883SToby Isaac   PetscFunctionBegin;
27116718818eSStefano Zampini   MatCheckProduct(C, 3);
27125f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty");
27136718818eSStefano Zampini   abt = (Mat_MatTransMultDense *)C->product->data;
2714faa55883SToby Isaac   switch (abt->alg) {
27159371c9d4SSatish Balay   case 1: PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C)); break;
27169371c9d4SSatish Balay   default: PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C)); break;
2717faa55883SToby Isaac   }
2718faa55883SToby Isaac   PetscFunctionReturn(0);
2719faa55883SToby Isaac }
2720faa55883SToby Isaac 
27219371c9d4SSatish Balay PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data) {
27226718818eSStefano Zampini   Mat_MatMultDense *ab = (Mat_MatMultDense *)data;
2723320f2790SHong Zhang 
2724320f2790SHong Zhang   PetscFunctionBegin;
27259566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Ce));
27269566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Ae));
27279566063dSJacob Faibussowitsch   PetscCall(MatDestroy(&ab->Be));
27289566063dSJacob Faibussowitsch   PetscCall(PetscFree(ab));
2729320f2790SHong Zhang   PetscFunctionReturn(0);
2730320f2790SHong Zhang }
2731320f2790SHong Zhang 
27325242a7b1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
27339371c9d4SSatish Balay PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) {
27346718818eSStefano Zampini   Mat_MatMultDense *ab;
2735320f2790SHong Zhang 
2736320f2790SHong Zhang   PetscFunctionBegin;
27376718818eSStefano Zampini   MatCheckProduct(C, 3);
27385f80ce2aSJacob Faibussowitsch   PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Missing product data");
27396718818eSStefano Zampini   ab = (Mat_MatMultDense *)C->product->data;
27409566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_Elemental(A, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Ae));
27419566063dSJacob Faibussowitsch   PetscCall(MatConvert_MPIDense_Elemental(B, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Be));
27429566063dSJacob Faibussowitsch   PetscCall(MatMatMultNumeric_Elemental(ab->Ae, ab->Be, ab->Ce));
27439566063dSJacob Faibussowitsch   PetscCall(MatConvert(ab->Ce, MATMPIDENSE, MAT_REUSE_MATRIX, &C));
2744320f2790SHong Zhang   PetscFunctionReturn(0);
2745320f2790SHong Zhang }
2746320f2790SHong Zhang 
27479371c9d4SSatish Balay static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) {
2748320f2790SHong Zhang   Mat               Ae, Be, Ce;
2749320f2790SHong Zhang   Mat_MatMultDense *ab;
2750320f2790SHong Zhang 
2751320f2790SHong Zhang   PetscFunctionBegin;
27526718818eSStefano Zampini   MatCheckProduct(C, 4);
27535f80ce2aSJacob Faibussowitsch   PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty");
27544222ddf1SHong Zhang   /* check local size of A and B */
2755320f2790SHong Zhang   if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend) {
275698921bdaSJacob Faibussowitsch     SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend);
2757320f2790SHong Zhang   }
2758320f2790SHong Zhang 
27594222ddf1SHong Zhang   /* create elemental matrices Ae and Be */
27609566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &Ae));
27619566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(Ae, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N));
27629566063dSJacob Faibussowitsch   PetscCall(MatSetType(Ae, MATELEMENTAL));
27639566063dSJacob Faibussowitsch   PetscCall(MatSetUp(Ae));
27649566063dSJacob Faibussowitsch   PetscCall(MatSetOption(Ae, MAT_ROW_ORIENTED, PETSC_FALSE));
2765320f2790SHong Zhang 
27669566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &Be));
27679566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(Be, PETSC_DECIDE, PETSC_DECIDE, B->rmap->N, B->cmap->N));
27689566063dSJacob Faibussowitsch   PetscCall(MatSetType(Be, MATELEMENTAL));
27699566063dSJacob Faibussowitsch   PetscCall(MatSetUp(Be));
27709566063dSJacob Faibussowitsch   PetscCall(MatSetOption(Be, MAT_ROW_ORIENTED, PETSC_FALSE));
2771320f2790SHong Zhang 
27724222ddf1SHong Zhang   /* compute symbolic Ce = Ae*Be */
27739566063dSJacob Faibussowitsch   PetscCall(MatCreate(PetscObjectComm((PetscObject)C), &Ce));
27749566063dSJacob Faibussowitsch   PetscCall(MatMatMultSymbolic_Elemental(Ae, Be, fill, Ce));
27754222ddf1SHong Zhang 
27764222ddf1SHong Zhang   /* setup C */
27779566063dSJacob Faibussowitsch   PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, PETSC_DECIDE, PETSC_DECIDE));
27789566063dSJacob Faibussowitsch   PetscCall(MatSetType(C, MATDENSE));
27799566063dSJacob Faibussowitsch   PetscCall(MatSetUp(C));
2780320f2790SHong Zhang 
2781320f2790SHong Zhang   /* create data structure for reuse Cdense */
27829566063dSJacob Faibussowitsch   PetscCall(PetscNew(&ab));
2783320f2790SHong Zhang   ab->Ae = Ae;
2784320f2790SHong Zhang   ab->Be = Be;
2785320f2790SHong Zhang   ab->Ce = Ce;
27866718818eSStefano Zampini 
27876718818eSStefano Zampini   C->product->data       = ab;
27886718818eSStefano Zampini   C->product->destroy    = MatDestroy_MatMatMult_MPIDense_MPIDense;
27894222ddf1SHong Zhang   C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense;
2790320f2790SHong Zhang   PetscFunctionReturn(0);
2791320f2790SHong Zhang }
27924222ddf1SHong Zhang #endif
27934222ddf1SHong Zhang /* ----------------------------------------------- */
27944222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
27959371c9d4SSatish Balay static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C) {
2796320f2790SHong Zhang   PetscFunctionBegin;
27974222ddf1SHong Zhang   C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense;
27984222ddf1SHong Zhang   C->ops->productsymbolic = MatProductSymbolic_AB;
2799320f2790SHong Zhang   PetscFunctionReturn(0);
2800320f2790SHong Zhang }
28015242a7b1SHong Zhang #endif
280286aefd0dSHong Zhang 
28039371c9d4SSatish Balay static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C) {
28044222ddf1SHong Zhang   Mat_Product *product = C->product;
28054222ddf1SHong Zhang   Mat          A = product->A, B = product->B;
28064222ddf1SHong Zhang 
28074222ddf1SHong Zhang   PetscFunctionBegin;
28084222ddf1SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend)
280998921bdaSJacob Faibussowitsch     SETERRQ(PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend);
28106718818eSStefano Zampini   C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense;
28116718818eSStefano Zampini   C->ops->productsymbolic          = MatProductSymbolic_AtB;
28124222ddf1SHong Zhang   PetscFunctionReturn(0);
28134222ddf1SHong Zhang }
28144222ddf1SHong Zhang 
28159371c9d4SSatish Balay static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C) {
28164222ddf1SHong Zhang   Mat_Product *product     = C->product;
28174222ddf1SHong Zhang   const char  *algTypes[2] = {"allgatherv", "cyclic"};
28184222ddf1SHong Zhang   PetscInt     alg, nalg = 2;
28194222ddf1SHong Zhang   PetscBool    flg = PETSC_FALSE;
28204222ddf1SHong Zhang 
28214222ddf1SHong Zhang   PetscFunctionBegin;
28224222ddf1SHong Zhang   /* Set default algorithm */
28234222ddf1SHong Zhang   alg = 0; /* default is allgatherv */
28249566063dSJacob Faibussowitsch   PetscCall(PetscStrcmp(product->alg, "default", &flg));
282548a46eb9SPierre Jolivet   if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg]));
28264222ddf1SHong Zhang 
28274222ddf1SHong Zhang   /* Get runtime option */
28284222ddf1SHong Zhang   if (product->api_user) {
2829d0609cedSBarry Smith     PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatMatTransposeMult", "Mat");
28309566063dSJacob Faibussowitsch     PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via", "Algorithmic approach", "MatMatTransposeMult", algTypes, nalg, algTypes[alg], &alg, &flg));
2831d0609cedSBarry Smith     PetscOptionsEnd();
28324222ddf1SHong Zhang   } else {
2833d0609cedSBarry Smith     PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_ABt", "Mat");
28349566063dSJacob Faibussowitsch     PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_ABt", algTypes, nalg, algTypes[alg], &alg, &flg));
2835d0609cedSBarry Smith     PetscOptionsEnd();
28364222ddf1SHong Zhang   }
283748a46eb9SPierre Jolivet   if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg]));
28384222ddf1SHong Zhang 
28394222ddf1SHong Zhang   C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense;
28404222ddf1SHong Zhang   C->ops->productsymbolic          = MatProductSymbolic_ABt;
28414222ddf1SHong Zhang   PetscFunctionReturn(0);
28424222ddf1SHong Zhang }
28434222ddf1SHong Zhang 
28449371c9d4SSatish Balay PETSC_INTERN PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C) {
28454222ddf1SHong Zhang   Mat_Product *product = C->product;
28464222ddf1SHong Zhang 
28474222ddf1SHong Zhang   PetscFunctionBegin;
28484222ddf1SHong Zhang   switch (product->type) {
28494222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
28509371c9d4SSatish Balay   case MATPRODUCT_AB: PetscCall(MatProductSetFromOptions_MPIDense_AB(C)); break;
28514222ddf1SHong Zhang #endif
28529371c9d4SSatish Balay   case MATPRODUCT_AtB: PetscCall(MatProductSetFromOptions_MPIDense_AtB(C)); break;
28539371c9d4SSatish Balay   case MATPRODUCT_ABt: PetscCall(MatProductSetFromOptions_MPIDense_ABt(C)); break;
28549371c9d4SSatish Balay   default: break;
28554222ddf1SHong Zhang   }
28564222ddf1SHong Zhang   PetscFunctionReturn(0);
28574222ddf1SHong Zhang }
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