1ed3cc1f0SBarry Smith /* 2ed3cc1f0SBarry Smith Basic functions for basic parallel dense matrices. 347d993e7Ssuyashtn Portions of this code are under: 447d993e7Ssuyashtn Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved. 5ed3cc1f0SBarry Smith */ 6ed3cc1f0SBarry Smith 7c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h> /*I "petscmat.h" I*/ 88949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h> 9baa3c1c6SHong Zhang #include <petscblaslapack.h> 104186a4bbSPierre Jolivet #include <petsc/private/vecimpl.h> 11d016bddeSToby Isaac #include <petscdevice.h> 12d016bddeSToby Isaac #include <petsc/private/deviceimpl.h> 138965ea79SLois Curfman McInnes 14ab92ecdeSBarry Smith /*@ 1511a5261eSBarry Smith MatDenseGetLocalMatrix - For a `MATMPIDENSE` or `MATSEQDENSE` matrix returns the sequential 16ab92ecdeSBarry Smith matrix that represents the operator. For sequential matrices it returns itself. 17ab92ecdeSBarry Smith 18ab92ecdeSBarry Smith Input Parameter: 192ef1f0ffSBarry Smith . A - the sequential or MPI `MATDENSE` matrix 20ab92ecdeSBarry Smith 21ab92ecdeSBarry Smith Output Parameter: 22ab92ecdeSBarry Smith . B - the inner matrix 23ab92ecdeSBarry Smith 248e6c10adSSatish Balay Level: intermediate 258e6c10adSSatish Balay 261cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MATMPIDENSE`, `MATSEQDENSE` 27ab92ecdeSBarry Smith @*/ 28d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetLocalMatrix(Mat A, Mat *B) 29d71ae5a4SJacob Faibussowitsch { 30ab92ecdeSBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 31ace3abfcSBarry Smith PetscBool flg; 32ab92ecdeSBarry Smith 33ab92ecdeSBarry Smith PetscFunctionBegin; 34d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 354f572ea9SToby Isaac PetscAssertPointer(B, 2); 369566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATMPIDENSE, &flg)); 372205254eSKarl Rupp if (flg) *B = mat->A; 38f140bc17SStefano Zampini else { 399566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATSEQDENSE, &flg)); 4028b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for matrix type %s", ((PetscObject)A)->type_name); 41f140bc17SStefano Zampini *B = A; 42f140bc17SStefano Zampini } 433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 44ab92ecdeSBarry Smith } 45ab92ecdeSBarry Smith 4666976f2fSJacob Faibussowitsch static PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s) 47d71ae5a4SJacob Faibussowitsch { 48a76f77c3SStefano Zampini Mat_MPIDense *Amat = (Mat_MPIDense *)A->data; 49a76f77c3SStefano Zampini Mat_MPIDense *Bmat = (Mat_MPIDense *)B->data; 50a76f77c3SStefano Zampini 51a76f77c3SStefano Zampini PetscFunctionBegin; 529566063dSJacob Faibussowitsch PetscCall(MatCopy(Amat->A, Bmat->A, s)); 533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 54a76f77c3SStefano Zampini } 55a76f77c3SStefano Zampini 56d71ae5a4SJacob Faibussowitsch PetscErrorCode MatShift_MPIDense(Mat A, PetscScalar alpha) 57d71ae5a4SJacob Faibussowitsch { 582f605a99SJose E. Roman Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 592f605a99SJose E. Roman PetscInt j, lda, rstart = A->rmap->rstart, rend = A->rmap->rend, rend2; 602f605a99SJose E. Roman PetscScalar *v; 612f605a99SJose E. Roman 622f605a99SJose E. Roman PetscFunctionBegin; 632f605a99SJose E. Roman PetscCall(MatDenseGetArray(mat->A, &v)); 642f605a99SJose E. Roman PetscCall(MatDenseGetLDA(mat->A, &lda)); 652f605a99SJose E. Roman rend2 = PetscMin(rend, A->cmap->N); 662f605a99SJose E. Roman if (rend2 > rstart) { 672f605a99SJose E. Roman for (j = rstart; j < rend2; j++) v[j - rstart + j * lda] += alpha; 682f605a99SJose E. Roman PetscCall(PetscLogFlops(rend2 - rstart)); 692f605a99SJose E. Roman } 702f605a99SJose E. Roman PetscCall(MatDenseRestoreArray(mat->A, &v)); 713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 722f605a99SJose E. Roman } 732f605a99SJose E. Roman 7466976f2fSJacob Faibussowitsch static PetscErrorCode MatGetRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 75d71ae5a4SJacob Faibussowitsch { 76ba8c8a56SBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 77d0f46423SBarry Smith PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 78ba8c8a56SBarry Smith 79ba8c8a56SBarry Smith PetscFunctionBegin; 80aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 81ba8c8a56SBarry Smith lrow = row - rstart; 829566063dSJacob Faibussowitsch PetscCall(MatGetRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 84ba8c8a56SBarry Smith } 85ba8c8a56SBarry Smith 8666976f2fSJacob Faibussowitsch static PetscErrorCode MatRestoreRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 87d71ae5a4SJacob Faibussowitsch { 88637a0070SStefano Zampini Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 89637a0070SStefano Zampini PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 90ba8c8a56SBarry Smith 91ba8c8a56SBarry Smith PetscFunctionBegin; 92aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 93637a0070SStefano Zampini lrow = row - rstart; 949566063dSJacob Faibussowitsch PetscCall(MatRestoreRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 96ba8c8a56SBarry Smith } 97ba8c8a56SBarry Smith 9866976f2fSJacob Faibussowitsch static PetscErrorCode MatGetDiagonalBlock_MPIDense(Mat A, Mat *a) 99d71ae5a4SJacob Faibussowitsch { 1000de54da6SSatish Balay Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 101d0f46423SBarry Smith PetscInt m = A->rmap->n, rstart = A->rmap->rstart; 10287828ca2SBarry Smith PetscScalar *array; 1030de54da6SSatish Balay MPI_Comm comm; 1044b6ae80fSStefano Zampini PetscBool flg; 10511bd1e4dSLisandro Dalcin Mat B; 1060de54da6SSatish Balay 1070de54da6SSatish Balay PetscFunctionBegin; 1089566063dSJacob Faibussowitsch PetscCall(MatHasCongruentLayouts(A, &flg)); 10928b400f6SJacob Faibussowitsch PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only square matrices supported."); 1109566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery((PetscObject)A, "DiagonalBlock", (PetscObject *)&B)); 111616b8fbbSStefano Zampini if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */ 112a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 1139566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSECUDA, &flg)); 11428b400f6SJacob Faibussowitsch PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSECUDA); 115a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 11647d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSEHIP, &flg)); 11747d993e7Ssuyashtn PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSEHIP); 11847d993e7Ssuyashtn #endif 119f4f49eeaSPierre Jolivet PetscCall(PetscObjectGetComm((PetscObject)mdn->A, &comm)); 1209566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &B)); 1219566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, m, m, m, m)); 1229566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)mdn->A)->type_name)); 1239566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, (const PetscScalar **)&array)); 1249566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(B, array + m * rstart)); 1259566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, (const PetscScalar **)&array)); 1269566063dSJacob Faibussowitsch PetscCall(PetscObjectCompose((PetscObject)A, "DiagonalBlock", (PetscObject)B)); 12711bd1e4dSLisandro Dalcin *a = B; 1289566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 1292205254eSKarl Rupp } else *a = B; 1303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1310de54da6SSatish Balay } 1320de54da6SSatish Balay 13366976f2fSJacob Faibussowitsch static PetscErrorCode MatSetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv) 134d71ae5a4SJacob Faibussowitsch { 13539b7565bSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)mat->data; 136d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 137ace3abfcSBarry Smith PetscBool roworiented = A->roworiented; 1388965ea79SLois Curfman McInnes 1393a40ed3dSBarry Smith PetscFunctionBegin; 1408965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 1415ef9f2a5SBarry Smith if (idxm[i] < 0) continue; 14208401ef6SPierre Jolivet PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 1438965ea79SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 1448965ea79SLois Curfman McInnes row = idxm[i] - rstart; 14539b7565bSBarry Smith if (roworiented) { 146de0a9f35SPierre Jolivet PetscCall(MatSetValues(A->A, 1, &row, n, idxn, PetscSafePointerPlusOffset(v, i * n), addv)); 1473a40ed3dSBarry Smith } else { 1488965ea79SLois Curfman McInnes for (j = 0; j < n; j++) { 1495ef9f2a5SBarry Smith if (idxn[j] < 0) continue; 15008401ef6SPierre Jolivet PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 151de0a9f35SPierre Jolivet PetscCall(MatSetValues(A->A, 1, &row, 1, &idxn[j], PetscSafePointerPlusOffset(v, i + j * m), addv)); 15239b7565bSBarry Smith } 1538965ea79SLois Curfman McInnes } 1542205254eSKarl Rupp } else if (!A->donotstash) { 1555080c13bSMatthew G Knepley mat->assembled = PETSC_FALSE; 15639b7565bSBarry Smith if (roworiented) { 157de0a9f35SPierre Jolivet PetscCall(MatStashValuesRow_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i * n), PETSC_FALSE)); 158d36fbae8SSatish Balay } else { 159de0a9f35SPierre Jolivet PetscCall(MatStashValuesCol_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i), m, PETSC_FALSE)); 16039b7565bSBarry Smith } 161b49de8d1SLois Curfman McInnes } 162b49de8d1SLois Curfman McInnes } 1633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 164b49de8d1SLois Curfman McInnes } 165b49de8d1SLois Curfman McInnes 16666976f2fSJacob Faibussowitsch static PetscErrorCode MatGetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], PetscScalar v[]) 167d71ae5a4SJacob Faibussowitsch { 168b49de8d1SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 169d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 170b49de8d1SLois Curfman McInnes 1713a40ed3dSBarry Smith PetscFunctionBegin; 172b49de8d1SLois Curfman McInnes for (i = 0; i < m; i++) { 17354c59aa7SJacob Faibussowitsch if (idxm[i] < 0) continue; /* negative row */ 17454c59aa7SJacob Faibussowitsch PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 175*966bd95aSPierre Jolivet PetscCheck(idxm[i] >= rstart && idxm[i] < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only local values currently supported"); 176b49de8d1SLois Curfman McInnes row = idxm[i] - rstart; 177b49de8d1SLois Curfman McInnes for (j = 0; j < n; j++) { 17854c59aa7SJacob Faibussowitsch if (idxn[j] < 0) continue; /* negative column */ 17954c59aa7SJacob Faibussowitsch PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1809566063dSJacob Faibussowitsch PetscCall(MatGetValues(mdn->A, 1, &row, 1, &idxn[j], v + i * n + j)); 181b49de8d1SLois Curfman McInnes } 1828965ea79SLois Curfman McInnes } 1833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1848965ea79SLois Curfman McInnes } 1858965ea79SLois Curfman McInnes 186d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A, PetscInt *lda) 187d71ae5a4SJacob Faibussowitsch { 18849a6ff4bSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 18949a6ff4bSBarry Smith 19049a6ff4bSBarry Smith PetscFunctionBegin; 1919566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, lda)); 1923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19349a6ff4bSBarry Smith } 19449a6ff4bSBarry Smith 195d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A, PetscInt lda) 196d71ae5a4SJacob Faibussowitsch { 197ad16ce7aSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 19847d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 199ad16ce7aSStefano Zampini 200ad16ce7aSStefano Zampini PetscFunctionBegin; 20117359960SJose E. Roman if (!a->A) { 20228b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2039566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 2049566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 2059566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 2069566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N)); 207a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 20847d993e7Ssuyashtn PetscBool iscuda; 2099566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda)); 21047d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 211a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 21247d993e7Ssuyashtn PetscBool iship; 21347d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSEHIP, &iship)); 21447d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 21547d993e7Ssuyashtn #endif 21647d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 21717359960SJose E. Roman } 2189566063dSJacob Faibussowitsch PetscCall(MatDenseSetLDA(a->A, lda)); 2193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 220ad16ce7aSStefano Zampini } 221ad16ce7aSStefano Zampini 222d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArray_MPIDense(Mat A, PetscScalar **array) 223d71ae5a4SJacob Faibussowitsch { 224ff14e315SSatish Balay Mat_MPIDense *a = (Mat_MPIDense *)A->data; 225ff14e315SSatish Balay 2263a40ed3dSBarry Smith PetscFunctionBegin; 22728b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2289566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, array)); 2293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 230ff14e315SSatish Balay } 231ff14e315SSatish Balay 232f1e99121SPierre Jolivet static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A, PetscScalar **array) 233d71ae5a4SJacob Faibussowitsch { 2348572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2358572280aSBarry Smith 2368572280aSBarry Smith PetscFunctionBegin; 23728b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 238f1e99121SPierre Jolivet PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)array)); 2393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2408572280aSBarry Smith } 2418572280aSBarry Smith 242d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A, PetscScalar **array) 243d71ae5a4SJacob Faibussowitsch { 2446947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2456947451fSStefano Zampini 2466947451fSStefano Zampini PetscFunctionBegin; 24728b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2489566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, array)); 2493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2506947451fSStefano Zampini } 2516947451fSStefano Zampini 252d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A, const PetscScalar *array) 253d71ae5a4SJacob Faibussowitsch { 254d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 255d3042a70SBarry Smith 256d3042a70SBarry Smith PetscFunctionBegin; 25728b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 25828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2599566063dSJacob Faibussowitsch PetscCall(MatDensePlaceArray(a->A, array)); 2603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 261d3042a70SBarry Smith } 262d3042a70SBarry Smith 263d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseResetArray_MPIDense(Mat A) 264d71ae5a4SJacob Faibussowitsch { 265d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 266d3042a70SBarry Smith 267d3042a70SBarry Smith PetscFunctionBegin; 26828b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 26928b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2709566063dSJacob Faibussowitsch PetscCall(MatDenseResetArray(a->A)); 2713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 272d3042a70SBarry Smith } 273d3042a70SBarry Smith 274d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A, const PetscScalar *array) 275d71ae5a4SJacob Faibussowitsch { 276d5ea218eSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 277d5ea218eSStefano Zampini 278d5ea218eSStefano Zampini PetscFunctionBegin; 27928b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 28028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2819566063dSJacob Faibussowitsch PetscCall(MatDenseReplaceArray(a->A, array)); 2823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 283d5ea218eSStefano Zampini } 284d5ea218eSStefano Zampini 285d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A, IS isrow, IS iscol, MatReuse scall, Mat *B) 286d71ae5a4SJacob Faibussowitsch { 287ca3fa75bSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data, *newmatd; 288637a0070SStefano Zampini PetscInt lda, i, j, rstart, rend, nrows, ncols, Ncols, nlrows, nlcols; 2895d0c19d7SBarry Smith const PetscInt *irow, *icol; 290637a0070SStefano Zampini const PetscScalar *v; 291637a0070SStefano Zampini PetscScalar *bv; 292ca3fa75bSLois Curfman McInnes Mat newmat; 2934aa3045dSJed Brown IS iscol_local; 29442a884f0SBarry Smith MPI_Comm comm_is, comm_mat; 295ca3fa75bSLois Curfman McInnes 296ca3fa75bSLois Curfman McInnes PetscFunctionBegin; 2979566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm_mat)); 2989566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)iscol, &comm_is)); 29908401ef6SPierre Jolivet PetscCheck(comm_mat == comm_is, PETSC_COMM_SELF, PETSC_ERR_ARG_NOTSAMECOMM, "IS communicator must match matrix communicator"); 30042a884f0SBarry Smith 3019566063dSJacob Faibussowitsch PetscCall(ISAllGather(iscol, &iscol_local)); 3029566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &irow)); 3039566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol_local, &icol)); 3049566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(isrow, &nrows)); 3059566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(iscol, &ncols)); 3069566063dSJacob Faibussowitsch PetscCall(ISGetSize(iscol, &Ncols)); /* global number of columns, size of iscol_local */ 307ca3fa75bSLois Curfman McInnes 308ca3fa75bSLois Curfman McInnes /* No parallel redistribution currently supported! Should really check each index set 309da81f932SPierre Jolivet to confirm that it is OK. ... Currently supports only submatrix same partitioning as 3107eba5e9cSLois Curfman McInnes original matrix! */ 311ca3fa75bSLois Curfman McInnes 3129566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &nlrows, &nlcols)); 3139566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRange(A, &rstart, &rend)); 314ca3fa75bSLois Curfman McInnes 315ca3fa75bSLois Curfman McInnes /* Check submatrix call */ 316ca3fa75bSLois Curfman McInnes if (scall == MAT_REUSE_MATRIX) { 317e32f2f54SBarry Smith /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */ 3187eba5e9cSLois Curfman McInnes /* Really need to test rows and column sizes! */ 319ca3fa75bSLois Curfman McInnes newmat = *B; 320ca3fa75bSLois Curfman McInnes } else { 321ca3fa75bSLois Curfman McInnes /* Create and fill new matrix */ 3229566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &newmat)); 3239566063dSJacob Faibussowitsch PetscCall(MatSetSizes(newmat, nrows, ncols, PETSC_DECIDE, Ncols)); 3249566063dSJacob Faibussowitsch PetscCall(MatSetType(newmat, ((PetscObject)A)->type_name)); 3259566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(newmat, NULL)); 326ca3fa75bSLois Curfman McInnes } 327ca3fa75bSLois Curfman McInnes 328ca3fa75bSLois Curfman McInnes /* Now extract the data pointers and do the copy, column at a time */ 329ca3fa75bSLois Curfman McInnes newmatd = (Mat_MPIDense *)newmat->data; 3309566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(newmatd->A, &bv)); 3319566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mat->A, &v)); 3329566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mat->A, &lda)); 3334aa3045dSJed Brown for (i = 0; i < Ncols; i++) { 334637a0070SStefano Zampini const PetscScalar *av = v + lda * icol[i]; 335ad540459SPierre Jolivet for (j = 0; j < nrows; j++) *bv++ = av[irow[j] - rstart]; 336ca3fa75bSLois Curfman McInnes } 3379566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mat->A, &v)); 3389566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(newmatd->A, &bv)); 339ca3fa75bSLois Curfman McInnes 340ca3fa75bSLois Curfman McInnes /* Assemble the matrices so that the correct flags are set */ 3419566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(newmat, MAT_FINAL_ASSEMBLY)); 3429566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(newmat, MAT_FINAL_ASSEMBLY)); 343ca3fa75bSLois Curfman McInnes 344ca3fa75bSLois Curfman McInnes /* Free work space */ 3459566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &irow)); 3469566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol_local, &icol)); 3479566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iscol_local)); 348ca3fa75bSLois Curfman McInnes *B = newmat; 3493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 350ca3fa75bSLois Curfman McInnes } 351ca3fa75bSLois Curfman McInnes 35266976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A, PetscScalar **array) 353d71ae5a4SJacob Faibussowitsch { 35473a71a0fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 35573a71a0fSBarry Smith 3563a40ed3dSBarry Smith PetscFunctionBegin; 3579566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, array)); 3583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 359ff14e315SSatish Balay } 360ff14e315SSatish Balay 361f1e99121SPierre Jolivet static PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A, PetscScalar **array) 362d71ae5a4SJacob Faibussowitsch { 3638572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3648572280aSBarry Smith 3658572280aSBarry Smith PetscFunctionBegin; 366f1e99121SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)array)); 3673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3688572280aSBarry Smith } 3698572280aSBarry Smith 37066976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A, PetscScalar **array) 371d71ae5a4SJacob Faibussowitsch { 3726947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3736947451fSStefano Zampini 3746947451fSStefano Zampini PetscFunctionBegin; 3759566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, array)); 3763ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3776947451fSStefano Zampini } 3786947451fSStefano Zampini 37966976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat, MatAssemblyType mode) 380d71ae5a4SJacob Faibussowitsch { 38139ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 38213f74950SBarry Smith PetscInt nstash, reallocs; 3838965ea79SLois Curfman McInnes 3843a40ed3dSBarry Smith PetscFunctionBegin; 3853ba16761SJacob Faibussowitsch if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(PETSC_SUCCESS); 3868965ea79SLois Curfman McInnes 3879566063dSJacob Faibussowitsch PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); 3889566063dSJacob Faibussowitsch PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); 3899566063dSJacob Faibussowitsch PetscCall(PetscInfo(mdn->A, "Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n", nstash, reallocs)); 3903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3918965ea79SLois Curfman McInnes } 3928965ea79SLois Curfman McInnes 39366976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat, MatAssemblyType mode) 394d71ae5a4SJacob Faibussowitsch { 39539ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 39613f74950SBarry Smith PetscInt i, *row, *col, flg, j, rstart, ncols; 39713f74950SBarry Smith PetscMPIInt n; 39887828ca2SBarry Smith PetscScalar *val; 3998965ea79SLois Curfman McInnes 4003a40ed3dSBarry Smith PetscFunctionBegin; 401910cf402Sprj- if (!mdn->donotstash && !mat->nooffprocentries) { 4028965ea79SLois Curfman McInnes /* wait on receives */ 4037ef1d9bdSSatish Balay while (1) { 4049566063dSJacob Faibussowitsch PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); 4057ef1d9bdSSatish Balay if (!flg) break; 4068965ea79SLois Curfman McInnes 4077ef1d9bdSSatish Balay for (i = 0; i < n;) { 4087ef1d9bdSSatish Balay /* Now identify the consecutive vals belonging to the same row */ 4092205254eSKarl Rupp for (j = i, rstart = row[j]; j < n; j++) { 4102205254eSKarl Rupp if (row[j] != rstart) break; 4112205254eSKarl Rupp } 4127ef1d9bdSSatish Balay if (j < n) ncols = j - i; 4137ef1d9bdSSatish Balay else ncols = n - i; 4147ef1d9bdSSatish Balay /* Now assemble all these values with a single function call */ 4159566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(mat, 1, row + i, ncols, col + i, val + i, mat->insertmode)); 4167ef1d9bdSSatish Balay i = j; 4178965ea79SLois Curfman McInnes } 4187ef1d9bdSSatish Balay } 4199566063dSJacob Faibussowitsch PetscCall(MatStashScatterEnd_Private(&mat->stash)); 420910cf402Sprj- } 4218965ea79SLois Curfman McInnes 4229566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mdn->A, mode)); 4239566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mdn->A, mode)); 4243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4258965ea79SLois Curfman McInnes } 4268965ea79SLois Curfman McInnes 42766976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroEntries_MPIDense(Mat A) 428d71ae5a4SJacob Faibussowitsch { 42939ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 4303a40ed3dSBarry Smith 4313a40ed3dSBarry Smith PetscFunctionBegin; 4329566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(l->A)); 4333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4348965ea79SLois Curfman McInnes } 4358965ea79SLois Curfman McInnes 43666976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroRows_MPIDense(Mat A, PetscInt n, const PetscInt rows[], PetscScalar diag, Vec x, Vec b) 437d71ae5a4SJacob Faibussowitsch { 43839ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 439637a0070SStefano Zampini PetscInt i, len, *lrows; 440637a0070SStefano Zampini 441637a0070SStefano Zampini PetscFunctionBegin; 442637a0070SStefano Zampini /* get locally owned rows */ 4439566063dSJacob Faibussowitsch PetscCall(PetscLayoutMapLocal(A->rmap, n, rows, &len, &lrows, NULL)); 444dd8e379bSPierre Jolivet /* fix right-hand side if needed */ 445637a0070SStefano Zampini if (x && b) { 44697b48c8fSBarry Smith const PetscScalar *xx; 44797b48c8fSBarry Smith PetscScalar *bb; 4488965ea79SLois Curfman McInnes 4499566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(x, &xx)); 4509566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(b, &bb)); 451637a0070SStefano Zampini for (i = 0; i < len; ++i) bb[lrows[i]] = diag * xx[lrows[i]]; 4529566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(x, &xx)); 4539566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(b, &bb)); 45497b48c8fSBarry Smith } 4559566063dSJacob Faibussowitsch PetscCall(MatZeroRows(l->A, len, lrows, 0.0, NULL, NULL)); 456e2eb51b1SBarry Smith if (diag != 0.0) { 457637a0070SStefano Zampini Vec d; 458b9679d65SBarry Smith 4599566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A, NULL, &d)); 4609566063dSJacob Faibussowitsch PetscCall(VecSet(d, diag)); 4619566063dSJacob Faibussowitsch PetscCall(MatDiagonalSet(A, d, INSERT_VALUES)); 4629566063dSJacob Faibussowitsch PetscCall(VecDestroy(&d)); 463b9679d65SBarry Smith } 4649566063dSJacob Faibussowitsch PetscCall(PetscFree(lrows)); 4653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4668965ea79SLois Curfman McInnes } 4678965ea79SLois Curfman McInnes 4680be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat, Vec, Vec); 4690be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat, Vec, Vec, Vec); 4700be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat, Vec, Vec); 4710be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat, Vec, Vec, Vec); 4720be0d8bdSHansol Suh 473d016bddeSToby Isaac static PetscErrorCode MatMultColumnRange_MPIDense(Mat mat, Vec xx, Vec yy, PetscInt c_start, PetscInt c_end) 474d016bddeSToby Isaac { 475d016bddeSToby Isaac Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 476d016bddeSToby Isaac const PetscScalar *ax; 477d016bddeSToby Isaac PetscScalar *ay; 478d016bddeSToby Isaac PetscMemType axmtype, aymtype; 479d016bddeSToby Isaac 480d016bddeSToby Isaac PetscFunctionBegin; 481d016bddeSToby Isaac if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 482d016bddeSToby Isaac PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 483d016bddeSToby Isaac PetscCall(VecGetArrayWriteAndMemType(mdn->lvec, &ay, &aymtype)); 484d016bddeSToby Isaac PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 485d016bddeSToby Isaac PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 486d016bddeSToby Isaac PetscCall(VecRestoreArrayWriteAndMemType(mdn->lvec, &ay)); 487d016bddeSToby Isaac PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 488d016bddeSToby Isaac PetscUseMethod(mdn->A, "MatMultColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (mdn->A, mdn->lvec, yy, c_start, c_end)); 489d016bddeSToby Isaac PetscFunctionReturn(PETSC_SUCCESS); 490d016bddeSToby Isaac } 491d016bddeSToby Isaac 49266976f2fSJacob Faibussowitsch static PetscErrorCode MatMult_MPIDense(Mat mat, Vec xx, Vec yy) 493d71ae5a4SJacob Faibussowitsch { 49439ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 495637a0070SStefano Zampini const PetscScalar *ax; 496637a0070SStefano Zampini PetscScalar *ay; 497d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 498c456f294SBarry Smith 4993a40ed3dSBarry Smith PetscFunctionBegin; 5006f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5019566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 502d016bddeSToby Isaac PetscCall(VecGetArrayWriteAndMemType(mdn->lvec, &ay, &aymtype)); 5039566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5049566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 505d016bddeSToby Isaac PetscCall(VecRestoreArrayWriteAndMemType(mdn->lvec, &ay)); 5069566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5079566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->mult)(mdn->A, mdn->lvec, yy)); 5083ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5098965ea79SLois Curfman McInnes } 5108965ea79SLois Curfman McInnes 5110be0d8bdSHansol Suh static PetscErrorCode MatMultAddColumnRange_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz, PetscInt c_start, PetscInt c_end) 5120be0d8bdSHansol Suh { 5130be0d8bdSHansol Suh Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 5140be0d8bdSHansol Suh const PetscScalar *ax; 5150be0d8bdSHansol Suh PetscScalar *ay; 5160be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 5170be0d8bdSHansol Suh 5180be0d8bdSHansol Suh PetscFunctionBegin; 5190be0d8bdSHansol Suh if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5200be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 5210be0d8bdSHansol Suh PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 5220be0d8bdSHansol Suh PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5230be0d8bdSHansol Suh PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 5240be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 5250be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5260be0d8bdSHansol Suh PetscUseMethod(mdn->A, "MatMultAddColumnRange_C", (Mat, Vec, Vec, Vec, PetscInt, PetscInt), (mdn->A, mdn->lvec, yy, zz, c_start, c_end)); 5270be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 5280be0d8bdSHansol Suh } 5290be0d8bdSHansol Suh 53066976f2fSJacob Faibussowitsch static PetscErrorCode MatMultAdd_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz) 531d71ae5a4SJacob Faibussowitsch { 53239ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 533637a0070SStefano Zampini const PetscScalar *ax; 534637a0070SStefano Zampini PetscScalar *ay; 535d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 536c456f294SBarry Smith 5373a40ed3dSBarry Smith PetscFunctionBegin; 5386f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5399566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 5409566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 5419566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5429566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 5439566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 5449566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5459566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->multadd)(mdn->A, mdn->lvec, yy, zz)); 5463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5478965ea79SLois Curfman McInnes } 5488965ea79SLois Curfman McInnes 5490be0d8bdSHansol Suh static PetscErrorCode MatMultHermitianTransposeColumnRange_MPIDense(Mat A, Vec xx, Vec yy, PetscInt c_start, PetscInt c_end) 5500be0d8bdSHansol Suh { 5510be0d8bdSHansol Suh Mat_MPIDense *a = (Mat_MPIDense *)A->data; 5520be0d8bdSHansol Suh const PetscScalar *ax; 5530be0d8bdSHansol Suh PetscScalar *ay; 5540be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 555d016bddeSToby Isaac PetscInt r_start, r_end; 556d016bddeSToby Isaac PetscInt c_start_local, c_end_local; 5570be0d8bdSHansol Suh 5580be0d8bdSHansol Suh PetscFunctionBegin; 5590be0d8bdSHansol Suh if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 560d016bddeSToby Isaac PetscCall(VecZeroEntries(a->lvec)); 561d016bddeSToby Isaac PetscCall(VecGetOwnershipRange(yy, &r_start, &r_end)); 562d016bddeSToby Isaac c_start_local = PetscMax(c_start, r_start); 563d016bddeSToby Isaac c_end_local = PetscMin(c_end, r_end); 564d016bddeSToby Isaac PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 565d016bddeSToby Isaac if (c_end_local > c_start_local) { 566d016bddeSToby Isaac if (PetscMemTypeHost(aymtype)) { 567d016bddeSToby Isaac PetscCall(PetscArrayzero(&ay[c_start_local], (size_t)(c_end_local - c_start_local))); 568d016bddeSToby Isaac } else { 569d016bddeSToby Isaac PetscCall(PetscDeviceRegisterMemory(ay, aymtype, sizeof(*ay) * ((size_t)(r_end - r_start)))); 570d016bddeSToby Isaac PetscCall(PetscDeviceArrayZero(NULL, &ay[c_start_local], (size_t)(c_end_local - c_start_local))); 571d016bddeSToby Isaac } 572d016bddeSToby Isaac } 5730be0d8bdSHansol Suh PetscUseMethod(a->A, "MatMultHermitianTransposeColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (a->A, xx, a->lvec, c_start, c_end)); 5740be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5750be0d8bdSHansol Suh PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5760be0d8bdSHansol Suh PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5770be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5780be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 5790be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 5800be0d8bdSHansol Suh } 5810be0d8bdSHansol Suh 582459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeKernel_MPIDense(Mat A, Vec xx, Vec yy, PetscBool herm) 583d71ae5a4SJacob Faibussowitsch { 584096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 585637a0070SStefano Zampini const PetscScalar *ax; 586637a0070SStefano Zampini PetscScalar *ay; 587d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 5884d86920dSPierre Jolivet 5893a40ed3dSBarry Smith PetscFunctionBegin; 5906f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 5919566063dSJacob Faibussowitsch PetscCall(VecSet(yy, 0.0)); 592459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 593459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 5949566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5959566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 5969566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5979566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5989566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5999566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 6003ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 601096963f5SLois Curfman McInnes } 602096963f5SLois Curfman McInnes 6030be0d8bdSHansol Suh static PetscErrorCode MatMultHermitianTransposeAddColumnRange_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscInt c_start, PetscInt c_end) 6040be0d8bdSHansol Suh { 6050be0d8bdSHansol Suh Mat_MPIDense *a = (Mat_MPIDense *)A->data; 6060be0d8bdSHansol Suh const PetscScalar *ax; 6070be0d8bdSHansol Suh PetscScalar *ay; 6080be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 6090be0d8bdSHansol Suh 6100be0d8bdSHansol Suh PetscFunctionBegin; 6110be0d8bdSHansol Suh if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 6120be0d8bdSHansol Suh PetscCall(VecCopy(yy, zz)); 613d016bddeSToby Isaac PetscCall(VecZeroEntries(a->lvec)); 6140be0d8bdSHansol Suh PetscUseMethod(a->A, "MatMultHermitianTransposeColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (a->A, xx, a->lvec, c_start, c_end)); 6150be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 6160be0d8bdSHansol Suh PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 6170be0d8bdSHansol Suh PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 6180be0d8bdSHansol Suh PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 6190be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 6200be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 6210be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 6220be0d8bdSHansol Suh } 6230be0d8bdSHansol Suh 624459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAddKernel_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscBool herm) 625d71ae5a4SJacob Faibussowitsch { 626096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 627637a0070SStefano Zampini const PetscScalar *ax; 628637a0070SStefano Zampini PetscScalar *ay; 629d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 630096963f5SLois Curfman McInnes 6313a40ed3dSBarry Smith PetscFunctionBegin; 6326f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 6339566063dSJacob Faibussowitsch PetscCall(VecCopy(yy, zz)); 634459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 635459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 6369566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 6379566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 6389566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 6399566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 6409566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 6419566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 6423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 643096963f5SLois Curfman McInnes } 644096963f5SLois Curfman McInnes 645459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTranspose_MPIDense(Mat A, Vec xx, Vec yy) 646459e8d23SBlanca Mellado Pinto { 647459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 648459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_FALSE)); 649459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 650459e8d23SBlanca Mellado Pinto } 651459e8d23SBlanca Mellado Pinto 652459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 653459e8d23SBlanca Mellado Pinto { 654459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 655459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_FALSE)); 656459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 657459e8d23SBlanca Mellado Pinto } 658459e8d23SBlanca Mellado Pinto 659459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTranspose_MPIDense(Mat A, Vec xx, Vec yy) 660459e8d23SBlanca Mellado Pinto { 661459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 662459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_TRUE)); 663459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 664459e8d23SBlanca Mellado Pinto } 665459e8d23SBlanca Mellado Pinto 666459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 667459e8d23SBlanca Mellado Pinto { 668459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 669459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_TRUE)); 670459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 671459e8d23SBlanca Mellado Pinto } 672459e8d23SBlanca Mellado Pinto 673d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetDiagonal_MPIDense(Mat A, Vec v) 674d71ae5a4SJacob Faibussowitsch { 67539ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 67679560b15SJacob Faibussowitsch PetscInt lda, len, i, nl, ng, m = A->rmap->n, radd; 67779560b15SJacob Faibussowitsch PetscScalar *x; 678637a0070SStefano Zampini const PetscScalar *av; 679ed3cc1f0SBarry Smith 6803a40ed3dSBarry Smith PetscFunctionBegin; 6819566063dSJacob Faibussowitsch PetscCall(VecGetArray(v, &x)); 68279560b15SJacob Faibussowitsch PetscCall(VecGetSize(v, &ng)); 68379560b15SJacob Faibussowitsch PetscCheck(ng == A->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming mat and vec"); 68479560b15SJacob Faibussowitsch PetscCall(VecGetLocalSize(v, &nl)); 685d0f46423SBarry Smith len = PetscMin(a->A->rmap->n, a->A->cmap->n); 686d0f46423SBarry Smith radd = A->rmap->rstart * m; 6879566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 6889566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 689ad540459SPierre Jolivet for (i = 0; i < len; i++) x[i] = av[radd + i * lda + i]; 6909566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 6910be0d8bdSHansol Suh if (nl - i > 0) PetscCall(PetscArrayzero(x + i, nl - i)); 6929566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(v, &x)); 6933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6948965ea79SLois Curfman McInnes } 6958965ea79SLois Curfman McInnes 69666976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MPIDense(Mat mat) 697d71ae5a4SJacob Faibussowitsch { 6983501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 699ed3cc1f0SBarry Smith 7003a40ed3dSBarry Smith PetscFunctionBegin; 7013ba16761SJacob Faibussowitsch PetscCall(PetscLogObjectState((PetscObject)mat, "Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT, mat->rmap->N, mat->cmap->N)); 7029566063dSJacob Faibussowitsch PetscCall(MatStashDestroy_Private(&mat->stash)); 70328b400f6SJacob Faibussowitsch PetscCheck(!mdn->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 70428b400f6SJacob Faibussowitsch PetscCheck(!mdn->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 7059566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->A)); 7069566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->lvec)); 7079566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&mdn->Mvctx)); 7089566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->cvec)); 7099566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->cmat)); 71001b82886SBarry Smith 7119566063dSJacob Faibussowitsch PetscCall(PetscFree(mat->data)); 7129566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, NULL)); 7138baccfbdSHong Zhang 7149566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", NULL)); 7159566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", NULL)); 7169566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", NULL)); 7179566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", NULL)); 7189566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", NULL)); 7199566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", NULL)); 7209566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", NULL)); 7219566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", NULL)); 7229566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", NULL)); 7239566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", NULL)); 7249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", NULL)); 7259566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", NULL)); 7269566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", NULL)); 7278baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 7289566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", NULL)); 7298baccfbdSHong Zhang #endif 730d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 7319566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", NULL)); 732d24d4204SJose E. Roman #endif 7339566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", NULL)); 7349566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", NULL)); 7359566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", NULL)); 7366718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 7379566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", NULL)); 7389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", NULL)); 7392e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", NULL)); 7402e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensecuda_mpidense_C", NULL)); 7412e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL)); 7422e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL)); 7432e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL)); 7442e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL)); 7452e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArray_C", NULL)); 7462e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayRead_C", NULL)); 7472e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayWrite_C", NULL)); 7482e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArray_C", NULL)); 7492e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayRead_C", NULL)); 7502e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayWrite_C", NULL)); 7512e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAPlaceArray_C", NULL)); 7522e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAResetArray_C", NULL)); 7532e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAReplaceArray_C", NULL)); 7543d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDASetPreallocation_C", NULL)); 7556718818eSStefano Zampini #endif 75647d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 75747d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", NULL)); 75847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", NULL)); 75947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", NULL)); 76047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensehip_mpidense_C", NULL)); 76147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensehip_C", NULL)); 76247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidensehip_C", NULL)); 76347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaij_C", NULL)); 76447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaijhipsparse_C", NULL)); 76547d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArray_C", NULL)); 76647d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayRead_C", NULL)); 76747d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayWrite_C", NULL)); 76847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArray_C", NULL)); 76947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayRead_C", NULL)); 77047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayWrite_C", NULL)); 77147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPPlaceArray_C", NULL)); 77247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPResetArray_C", NULL)); 77347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPReplaceArray_C", NULL)); 7743d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPSetPreallocation_C", NULL)); 77547d993e7Ssuyashtn #endif 7769566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", NULL)); 7779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", NULL)); 7789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", NULL)); 7799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", NULL)); 7809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", NULL)); 7819566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", NULL)); 7829566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", NULL)); 7839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", NULL)); 7849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", NULL)); 7859566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", NULL)); 786d016bddeSToby Isaac PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultColumnRange_C", NULL)); 7870be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultAddColumnRange_C", NULL)); 7880be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeColumnRange_C", NULL)); 7890be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeAddColumnRange_C", NULL)); 790f8103e6bSStefano Zampini 791f8103e6bSStefano Zampini PetscCall(PetscObjectCompose((PetscObject)mat, "DiagonalBlock", NULL)); 7923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7938965ea79SLois Curfman McInnes } 79439ddd567SLois Curfman McInnes 7959804daf3SBarry Smith #include <petscdraw.h> 796d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat, PetscViewer viewer) 797d71ae5a4SJacob Faibussowitsch { 79839ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 799616b8fbbSStefano Zampini PetscMPIInt rank; 80019fd82e9SBarry Smith PetscViewerType vtype; 8019f196a02SMartin Diehl PetscBool isascii, isdraw; 802b0a32e0cSBarry Smith PetscViewer sviewer; 803f3ef73ceSBarry Smith PetscViewerFormat format; 8048965ea79SLois Curfman McInnes 8053a40ed3dSBarry Smith PetscFunctionBegin; 8069566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat), &rank)); 8079f196a02SMartin Diehl PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isascii)); 8089566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 8099f196a02SMartin Diehl if (isascii) { 8109566063dSJacob Faibussowitsch PetscCall(PetscViewerGetType(viewer, &vtype)); 8119566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 812456192e2SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 8134e220ebcSLois Curfman McInnes MatInfo info; 8149566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mat, MAT_LOCAL, &info)); 8159566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 8169371c9d4SSatish Balay PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, " [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n", rank, mat->rmap->n, (PetscInt)info.nz_used, (PetscInt)info.nz_allocated, 8179371c9d4SSatish Balay (PetscInt)info.memory)); 8189566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 8199566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 8206f08ad05SPierre Jolivet if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx, viewer)); 8213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 822fb9695e5SSatish Balay } else if (format == PETSC_VIEWER_ASCII_INFO) { 8233ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8248965ea79SLois Curfman McInnes } 825f1af5d2fSBarry Smith } else if (isdraw) { 826b0a32e0cSBarry Smith PetscDraw draw; 827ace3abfcSBarry Smith PetscBool isnull; 828f1af5d2fSBarry Smith 8299566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw)); 8309566063dSJacob Faibussowitsch PetscCall(PetscDrawIsNull(draw, &isnull)); 8313ba16761SJacob Faibussowitsch if (isnull) PetscFunctionReturn(PETSC_SUCCESS); 832f1af5d2fSBarry Smith } 83377ed5343SBarry Smith 8347da1fb6eSBarry Smith { 8358965ea79SLois Curfman McInnes /* assemble the entire matrix onto first processor. */ 8368965ea79SLois Curfman McInnes Mat A; 837d0f46423SBarry Smith PetscInt M = mat->rmap->N, N = mat->cmap->N, m, row, i, nz; 838ba8c8a56SBarry Smith PetscInt *cols; 839ba8c8a56SBarry Smith PetscScalar *vals; 8408965ea79SLois Curfman McInnes 8419566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &A)); 842dd400576SPatrick Sanan if (rank == 0) { 8439566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, M, N, M, N)); 8443a40ed3dSBarry Smith } else { 8459566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, 0, 0, M, N)); 8468965ea79SLois Curfman McInnes } 8477adad957SLisandro Dalcin /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */ 8489566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATMPIDENSE)); 8499566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 8508965ea79SLois Curfman McInnes 85139ddd567SLois Curfman McInnes /* Copy the matrix ... This isn't the most efficient means, 85239ddd567SLois Curfman McInnes but it's quick for now */ 85351022da4SBarry Smith A->insertmode = INSERT_VALUES; 8542205254eSKarl Rupp 8552205254eSKarl Rupp row = mat->rmap->rstart; 8562205254eSKarl Rupp m = mdn->A->rmap->n; 8578965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 8589566063dSJacob Faibussowitsch PetscCall(MatGetRow_MPIDense(mat, row, &nz, &cols, &vals)); 8599566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(A, 1, &row, nz, cols, vals, INSERT_VALUES)); 8609566063dSJacob Faibussowitsch PetscCall(MatRestoreRow_MPIDense(mat, row, &nz, &cols, &vals)); 86139ddd567SLois Curfman McInnes row++; 8628965ea79SLois Curfman McInnes } 8638965ea79SLois Curfman McInnes 8649566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 8659566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 8669566063dSJacob Faibussowitsch PetscCall(PetscViewerGetSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 867dd400576SPatrick Sanan if (rank == 0) { 868f4f49eeaSPierre Jolivet PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense *)A->data)->A, ((PetscObject)mat)->name)); 869f4f49eeaSPierre Jolivet PetscCall(MatView_SeqDense(((Mat_MPIDense *)A->data)->A, sviewer)); 8708965ea79SLois Curfman McInnes } 8719566063dSJacob Faibussowitsch PetscCall(PetscViewerRestoreSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 8729566063dSJacob Faibussowitsch PetscCall(MatDestroy(&A)); 8738965ea79SLois Curfman McInnes } 8743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8758965ea79SLois Curfman McInnes } 8768965ea79SLois Curfman McInnes 87766976f2fSJacob Faibussowitsch static PetscErrorCode MatView_MPIDense(Mat mat, PetscViewer viewer) 878d71ae5a4SJacob Faibussowitsch { 8799f196a02SMartin Diehl PetscBool isascii, isbinary, isdraw, issocket; 8808965ea79SLois Curfman McInnes 881433994e6SBarry Smith PetscFunctionBegin; 8829f196a02SMartin Diehl PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isascii)); 8839566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 8849566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSOCKET, &issocket)); 8859566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 8860f5bd95cSBarry Smith 8879f196a02SMartin Diehl if (isascii || issocket || isdraw) { 8889566063dSJacob Faibussowitsch PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat, viewer)); 8891baa6e33SBarry Smith } else if (isbinary) PetscCall(MatView_Dense_Binary(mat, viewer)); 8903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8918965ea79SLois Curfman McInnes } 8928965ea79SLois Curfman McInnes 89366976f2fSJacob Faibussowitsch static PetscErrorCode MatGetInfo_MPIDense(Mat A, MatInfoType flag, MatInfo *info) 894d71ae5a4SJacob Faibussowitsch { 8953501a2bdSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 8963501a2bdSLois Curfman McInnes Mat mdn = mat->A; 8973966268fSBarry Smith PetscLogDouble isend[5], irecv[5]; 8988965ea79SLois Curfman McInnes 8993a40ed3dSBarry Smith PetscFunctionBegin; 9004e220ebcSLois Curfman McInnes info->block_size = 1.0; 9012205254eSKarl Rupp 9029566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mdn, MAT_LOCAL, info)); 9032205254eSKarl Rupp 9049371c9d4SSatish Balay isend[0] = info->nz_used; 9059371c9d4SSatish Balay isend[1] = info->nz_allocated; 9069371c9d4SSatish Balay isend[2] = info->nz_unneeded; 9079371c9d4SSatish Balay isend[3] = info->memory; 9089371c9d4SSatish Balay isend[4] = info->mallocs; 9098965ea79SLois Curfman McInnes if (flag == MAT_LOCAL) { 9104e220ebcSLois Curfman McInnes info->nz_used = isend[0]; 9114e220ebcSLois Curfman McInnes info->nz_allocated = isend[1]; 9124e220ebcSLois Curfman McInnes info->nz_unneeded = isend[2]; 9134e220ebcSLois Curfman McInnes info->memory = isend[3]; 9144e220ebcSLois Curfman McInnes info->mallocs = isend[4]; 9158965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_MAX) { 916462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_MAX, PetscObjectComm((PetscObject)A))); 9172205254eSKarl Rupp 9184e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 9194e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 9204e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 9214e220ebcSLois Curfman McInnes info->memory = irecv[3]; 9224e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 9238965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_SUM) { 924462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_SUM, PetscObjectComm((PetscObject)A))); 9252205254eSKarl Rupp 9264e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 9274e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 9284e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 9294e220ebcSLois Curfman McInnes info->memory = irecv[3]; 9304e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 9318965ea79SLois Curfman McInnes } 9324e220ebcSLois Curfman McInnes info->fill_ratio_given = 0; /* no parallel LU/ILU/Cholesky */ 9334e220ebcSLois Curfman McInnes info->fill_ratio_needed = 0; 9344e220ebcSLois Curfman McInnes info->factor_mallocs = 0; 9353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9368965ea79SLois Curfman McInnes } 9378965ea79SLois Curfman McInnes 93866976f2fSJacob Faibussowitsch static PetscErrorCode MatSetOption_MPIDense(Mat A, MatOption op, PetscBool flg) 939d71ae5a4SJacob Faibussowitsch { 94039ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 9418965ea79SLois Curfman McInnes 9423a40ed3dSBarry Smith PetscFunctionBegin; 94312c028f9SKris Buschelman switch (op) { 944512a5fc5SBarry Smith case MAT_NEW_NONZERO_LOCATIONS: 94512c028f9SKris Buschelman case MAT_NEW_NONZERO_LOCATION_ERR: 94612c028f9SKris Buschelman case MAT_NEW_NONZERO_ALLOCATION_ERR: 94743674050SBarry Smith MatCheckPreallocated(A, 1); 9489566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 94912c028f9SKris Buschelman break; 95012c028f9SKris Buschelman case MAT_ROW_ORIENTED: 95143674050SBarry Smith MatCheckPreallocated(A, 1); 9524e0d8c25SBarry Smith a->roworiented = flg; 9539566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 95412c028f9SKris Buschelman break; 955d71ae5a4SJacob Faibussowitsch case MAT_IGNORE_OFF_PROC_ENTRIES: 956d71ae5a4SJacob Faibussowitsch a->donotstash = flg; 957d71ae5a4SJacob Faibussowitsch break; 95877e54ba9SKris Buschelman case MAT_SYMMETRIC: 95977e54ba9SKris Buschelman case MAT_STRUCTURALLY_SYMMETRIC: 9609a4540c5SBarry Smith case MAT_HERMITIAN: 9619a4540c5SBarry Smith case MAT_SYMMETRY_ETERNAL: 962b94d7dedSBarry Smith case MAT_STRUCTURAL_SYMMETRY_ETERNAL: 963b94d7dedSBarry Smith case MAT_SPD: 964b94d7dedSBarry Smith case MAT_SPD_ETERNAL: 965b94d7dedSBarry Smith /* if the diagonal matrix is square it inherits some of the properties above */ 9669725ddffSPierre Jolivet if (a->A && A->rmap->n == A->cmap->n) PetscCall(MatSetOption(a->A, op, flg)); 96777e54ba9SKris Buschelman break; 968d71ae5a4SJacob Faibussowitsch default: 969888c827cSStefano Zampini break; 9703a40ed3dSBarry Smith } 9713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9728965ea79SLois Curfman McInnes } 9738965ea79SLois Curfman McInnes 97466976f2fSJacob Faibussowitsch static PetscErrorCode MatDiagonalScale_MPIDense(Mat A, Vec ll, Vec rr) 975d71ae5a4SJacob Faibussowitsch { 9765b2fa520SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 977637a0070SStefano Zampini const PetscScalar *l; 978637a0070SStefano Zampini PetscScalar x, *v, *vv, *r; 979637a0070SStefano Zampini PetscInt i, j, s2a, s3a, s2, s3, m = mdn->A->rmap->n, n = mdn->A->cmap->n, lda; 9805b2fa520SLois Curfman McInnes 9815b2fa520SLois Curfman McInnes PetscFunctionBegin; 9829566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(mdn->A, &vv)); 9839566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mdn->A, &lda)); 9849566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &s2, &s3)); 9855b2fa520SLois Curfman McInnes if (ll) { 9869566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(ll, &s2a)); 98708401ef6SPierre Jolivet PetscCheck(s2a == s2, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2); 9889566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(ll, &l)); 9895b2fa520SLois Curfman McInnes for (i = 0; i < m; i++) { 9905b2fa520SLois Curfman McInnes x = l[i]; 991637a0070SStefano Zampini v = vv + i; 9929371c9d4SSatish Balay for (j = 0; j < n; j++) { 9939371c9d4SSatish Balay (*v) *= x; 9949371c9d4SSatish Balay v += lda; 9959371c9d4SSatish Balay } 9965b2fa520SLois Curfman McInnes } 9979566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(ll, &l)); 9989566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 9995b2fa520SLois Curfman McInnes } 10005b2fa520SLois Curfman McInnes if (rr) { 1001637a0070SStefano Zampini const PetscScalar *ar; 1002637a0070SStefano Zampini 10039566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(rr, &s3a)); 100408401ef6SPierre Jolivet PetscCheck(s3a == s3, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3); 10059566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(rr, &ar)); 10066f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 10079566063dSJacob Faibussowitsch PetscCall(VecGetArray(mdn->lvec, &r)); 10089566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 10099566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 10109566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(rr, &ar)); 10115b2fa520SLois Curfman McInnes for (i = 0; i < n; i++) { 10125b2fa520SLois Curfman McInnes x = r[i]; 1013637a0070SStefano Zampini v = vv + i * lda; 10142205254eSKarl Rupp for (j = 0; j < m; j++) (*v++) *= x; 10155b2fa520SLois Curfman McInnes } 10169566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(mdn->lvec, &r)); 10179566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 10185b2fa520SLois Curfman McInnes } 10199566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(mdn->A, &vv)); 10203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10215b2fa520SLois Curfman McInnes } 10225b2fa520SLois Curfman McInnes 102366976f2fSJacob Faibussowitsch static PetscErrorCode MatNorm_MPIDense(Mat A, NormType type, PetscReal *nrm) 1024d71ae5a4SJacob Faibussowitsch { 10253501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 102613f74950SBarry Smith PetscInt i, j; 1027e91c04dfSPierre Jolivet PetscMPIInt size; 1028329f5518SBarry Smith PetscReal sum = 0.0; 1029637a0070SStefano Zampini const PetscScalar *av, *v; 10303501a2bdSLois Curfman McInnes 10313a40ed3dSBarry Smith PetscFunctionBegin; 10329566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, &av)); 1033637a0070SStefano Zampini v = av; 10349566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1035616b8fbbSStefano Zampini if (size == 1) { 10369566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, nrm)); 10373501a2bdSLois Curfman McInnes } else { 10383501a2bdSLois Curfman McInnes if (type == NORM_FROBENIUS) { 1039d0f46423SBarry Smith for (i = 0; i < mdn->A->cmap->n * mdn->A->rmap->n; i++) { 10409371c9d4SSatish Balay sum += PetscRealPart(PetscConj(*v) * (*v)); 10419371c9d4SSatish Balay v++; 10423501a2bdSLois Curfman McInnes } 1043462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(&sum, nrm, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 10448f1a2a5eSBarry Smith *nrm = PetscSqrtReal(*nrm); 10459566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * mdn->A->cmap->n * mdn->A->rmap->n)); 10463a40ed3dSBarry Smith } else if (type == NORM_1) { 1047e91c04dfSPierre Jolivet PetscReal *tmp; 1048e91c04dfSPierre Jolivet 1049e91c04dfSPierre Jolivet PetscCall(PetscCalloc1(A->cmap->N, &tmp)); 1050064f8208SBarry Smith *nrm = 0.0; 1051637a0070SStefano Zampini v = av; 1052d0f46423SBarry Smith for (j = 0; j < mdn->A->cmap->n; j++) { 1053d0f46423SBarry Smith for (i = 0; i < mdn->A->rmap->n; i++) { 10549371c9d4SSatish Balay tmp[j] += PetscAbsScalar(*v); 10559371c9d4SSatish Balay v++; 10563501a2bdSLois Curfman McInnes } 10573501a2bdSLois Curfman McInnes } 1058e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, tmp, A->cmap->N, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 1059d0f46423SBarry Smith for (j = 0; j < A->cmap->N; j++) { 1060e91c04dfSPierre Jolivet if (tmp[j] > *nrm) *nrm = tmp[j]; 10613501a2bdSLois Curfman McInnes } 1062e91c04dfSPierre Jolivet PetscCall(PetscFree(tmp)); 10639566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(A->cmap->n * A->rmap->n)); 10643a40ed3dSBarry Smith } else if (type == NORM_INFINITY) { /* max row norm */ 1065e91c04dfSPierre Jolivet PetscCall(MatNorm(mdn->A, type, nrm)); 1066e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, nrm, 1, MPIU_REAL, MPIU_MAX, PetscObjectComm((PetscObject)A))); 1067ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for two norm"); 10683501a2bdSLois Curfman McInnes } 10699566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, &av)); 10703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10713501a2bdSLois Curfman McInnes } 10723501a2bdSLois Curfman McInnes 107366976f2fSJacob Faibussowitsch static PetscErrorCode MatTranspose_MPIDense(Mat A, MatReuse reuse, Mat *matout) 1074d71ae5a4SJacob Faibussowitsch { 10753501a2bdSLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10763501a2bdSLois Curfman McInnes Mat B; 1077d0f46423SBarry Smith PetscInt M = A->rmap->N, N = A->cmap->N, m, n, *rwork, rstart = A->rmap->rstart; 1078637a0070SStefano Zampini PetscInt j, i, lda; 107987828ca2SBarry Smith PetscScalar *v; 10803501a2bdSLois Curfman McInnes 10813a40ed3dSBarry Smith PetscFunctionBegin; 10827fb60732SBarry Smith if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *matout)); 1083cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { 10849566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 10859566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->cmap->n, A->rmap->n, N, M)); 10869566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)A)->type_name)); 10879566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(B, NULL)); 1088637a0070SStefano Zampini } else B = *matout; 10893501a2bdSLois Curfman McInnes 10909371c9d4SSatish Balay m = a->A->rmap->n; 10919371c9d4SSatish Balay n = a->A->cmap->n; 10929566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)&v)); 10939566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 10949566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &rwork)); 10953501a2bdSLois Curfman McInnes for (i = 0; i < m; i++) rwork[i] = rstart + i; 10961acff37aSSatish Balay for (j = 0; j < n; j++) { 10979566063dSJacob Faibussowitsch PetscCall(MatSetValues(B, 1, &j, m, rwork, v, INSERT_VALUES)); 10988e3a54c0SPierre Jolivet v = PetscSafePointerPlusOffset(v, lda); 10993501a2bdSLois Curfman McInnes } 11009566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)&v)); 11019566063dSJacob Faibussowitsch PetscCall(PetscFree(rwork)); 11029566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 11039566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 1104cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) { 11053501a2bdSLois Curfman McInnes *matout = B; 11063501a2bdSLois Curfman McInnes } else { 11079566063dSJacob Faibussowitsch PetscCall(MatHeaderMerge(A, &B)); 11083501a2bdSLois Curfman McInnes } 11093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1110096963f5SLois Curfman McInnes } 1111096963f5SLois Curfman McInnes 11126849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat, MatDuplicateOption, Mat *); 111352c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat, PetscScalar); 11148965ea79SLois Curfman McInnes 111566976f2fSJacob Faibussowitsch static PetscErrorCode MatSetUp_MPIDense(Mat A) 1116d71ae5a4SJacob Faibussowitsch { 1117273d9f13SBarry Smith PetscFunctionBegin; 11189566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 11199566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 112048a46eb9SPierre Jolivet if (!A->preallocated) PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 11213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1122273d9f13SBarry Smith } 1123273d9f13SBarry Smith 112466976f2fSJacob Faibussowitsch static PetscErrorCode MatAXPY_MPIDense(Mat Y, PetscScalar alpha, Mat X, MatStructure str) 1125d71ae5a4SJacob Faibussowitsch { 1126488007eeSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)Y->data, *B = (Mat_MPIDense *)X->data; 1127488007eeSBarry Smith 1128488007eeSBarry Smith PetscFunctionBegin; 11299566063dSJacob Faibussowitsch PetscCall(MatAXPY(A->A, alpha, B->A, str)); 11303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1131488007eeSBarry Smith } 1132488007eeSBarry Smith 113366976f2fSJacob Faibussowitsch static PetscErrorCode MatConjugate_MPIDense(Mat mat) 1134d71ae5a4SJacob Faibussowitsch { 1135ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 1136ba337c44SJed Brown 1137ba337c44SJed Brown PetscFunctionBegin; 11389566063dSJacob Faibussowitsch PetscCall(MatConjugate(a->A)); 11393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1140ba337c44SJed Brown } 1141ba337c44SJed Brown 114266976f2fSJacob Faibussowitsch static PetscErrorCode MatRealPart_MPIDense(Mat A) 1143d71ae5a4SJacob Faibussowitsch { 1144ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1145ba337c44SJed Brown 1146ba337c44SJed Brown PetscFunctionBegin; 11479566063dSJacob Faibussowitsch PetscCall(MatRealPart(a->A)); 11483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1149ba337c44SJed Brown } 1150ba337c44SJed Brown 115166976f2fSJacob Faibussowitsch static PetscErrorCode MatImaginaryPart_MPIDense(Mat A) 1152d71ae5a4SJacob Faibussowitsch { 1153ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1154ba337c44SJed Brown 1155ba337c44SJed Brown PetscFunctionBegin; 11569566063dSJacob Faibussowitsch PetscCall(MatImaginaryPart(a->A)); 11573ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1158ba337c44SJed Brown } 1159ba337c44SJed Brown 1160d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetColumnVector_MPIDense(Mat A, Vec v, PetscInt col) 1161d71ae5a4SJacob Faibussowitsch { 1162637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 116349a6ff4bSBarry Smith 116449a6ff4bSBarry Smith PetscFunctionBegin; 116528b400f6SJacob Faibussowitsch PetscCheck(a->A, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing local matrix"); 116628b400f6SJacob Faibussowitsch PetscCheck(a->A->ops->getcolumnvector, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing get column operation"); 11679566063dSJacob Faibussowitsch PetscCall((*a->A->ops->getcolumnvector)(a->A, v, col)); 11683ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 116949a6ff4bSBarry Smith } 117049a6ff4bSBarry Smith 1171857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat, PetscInt, PetscReal *); 117252c5f739Sprj- 117366976f2fSJacob Faibussowitsch static PetscErrorCode MatGetColumnReductions_MPIDense(Mat A, PetscInt type, PetscReal *reductions) 1174d71ae5a4SJacob Faibussowitsch { 1175a873a8cdSSam Reynolds PetscInt i, m, n; 11760716a85fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 11770716a85fSBarry Smith 11780716a85fSBarry Smith PetscFunctionBegin; 11799566063dSJacob Faibussowitsch PetscCall(MatGetSize(A, &m, &n)); 1180857cbf51SRichard Tran Mills if (type == REDUCTION_MEAN_REALPART) { 1181e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_REALPART, reductions)); 1182857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_IMAGINARYPART) { 1183e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_IMAGINARYPART, reductions)); 1184a873a8cdSSam Reynolds } else { 1185e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, type, reductions)); 1186a873a8cdSSam Reynolds } 1187857cbf51SRichard Tran Mills if (type == NORM_2) { 1188e91c04dfSPierre Jolivet for (i = 0; i < n; i++) reductions[i] *= reductions[i]; 11890716a85fSBarry Smith } 1190857cbf51SRichard Tran Mills if (type == NORM_INFINITY) { 1191e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, reductions, n, MPIU_REAL, MPIU_MAX, A->hdr.comm)); 11920716a85fSBarry Smith } else { 1193e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, reductions, n, MPIU_REAL, MPIU_SUM, A->hdr.comm)); 11940716a85fSBarry Smith } 1195857cbf51SRichard Tran Mills if (type == NORM_2) { 1196a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] = PetscSqrtReal(reductions[i]); 1197857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) { 1198a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] /= m; 11990716a85fSBarry Smith } 12003ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12010716a85fSBarry Smith } 12020716a85fSBarry Smith 1203d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetRandom_MPIDense(Mat x, PetscRandom rctx) 1204d71ae5a4SJacob Faibussowitsch { 120573a71a0fSBarry Smith Mat_MPIDense *d = (Mat_MPIDense *)x->data; 120673a71a0fSBarry Smith 120773a71a0fSBarry Smith PetscFunctionBegin; 12089566063dSJacob Faibussowitsch PetscCall(MatSetRandom(d->A, rctx)); 12093faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 12103faff063SStefano Zampini x->offloadmask = d->A->offloadmask; 12113faff063SStefano Zampini #endif 12123ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 121373a71a0fSBarry Smith } 121473a71a0fSBarry Smith 1215d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A, PetscBool *missing, PetscInt *d) 1216d71ae5a4SJacob Faibussowitsch { 12173b49f96aSBarry Smith PetscFunctionBegin; 12183b49f96aSBarry Smith *missing = PETSC_FALSE; 12193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12203b49f96aSBarry Smith } 12213b49f96aSBarry Smith 12224222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1223cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12246718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1225a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12266718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat, Mat, PetscBool *); 12276718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat, PetscViewer); 12285d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat); 1229cc48ffa7SToby Isaac 123009dc0095SBarry Smith static struct _MatOps MatOps_Values = {MatSetValues_MPIDense, 123109dc0095SBarry Smith MatGetRow_MPIDense, 123209dc0095SBarry Smith MatRestoreRow_MPIDense, 123309dc0095SBarry Smith MatMult_MPIDense, 123497304618SKris Buschelman /* 4*/ MatMultAdd_MPIDense, 12357c922b88SBarry Smith MatMultTranspose_MPIDense, 12367c922b88SBarry Smith MatMultTransposeAdd_MPIDense, 1237f4259b30SLisandro Dalcin NULL, 1238f4259b30SLisandro Dalcin NULL, 1239f4259b30SLisandro Dalcin NULL, 1240f4259b30SLisandro Dalcin /* 10*/ NULL, 1241f4259b30SLisandro Dalcin NULL, 1242f4259b30SLisandro Dalcin NULL, 1243f4259b30SLisandro Dalcin NULL, 124409dc0095SBarry Smith MatTranspose_MPIDense, 124597304618SKris Buschelman /* 15*/ MatGetInfo_MPIDense, 12466e4ee0c6SHong Zhang MatEqual_MPIDense, 124709dc0095SBarry Smith MatGetDiagonal_MPIDense, 12485b2fa520SLois Curfman McInnes MatDiagonalScale_MPIDense, 124909dc0095SBarry Smith MatNorm_MPIDense, 125097304618SKris Buschelman /* 20*/ MatAssemblyBegin_MPIDense, 125109dc0095SBarry Smith MatAssemblyEnd_MPIDense, 125209dc0095SBarry Smith MatSetOption_MPIDense, 125309dc0095SBarry Smith MatZeroEntries_MPIDense, 1254d519adbfSMatthew Knepley /* 24*/ MatZeroRows_MPIDense, 1255f4259b30SLisandro Dalcin NULL, 1256f4259b30SLisandro Dalcin NULL, 1257f4259b30SLisandro Dalcin NULL, 1258f4259b30SLisandro Dalcin NULL, 12594994cf47SJed Brown /* 29*/ MatSetUp_MPIDense, 1260f4259b30SLisandro Dalcin NULL, 1261f4259b30SLisandro Dalcin NULL, 1262c56a70eeSBarry Smith MatGetDiagonalBlock_MPIDense, 1263f4259b30SLisandro Dalcin NULL, 1264d519adbfSMatthew Knepley /* 34*/ MatDuplicate_MPIDense, 1265f4259b30SLisandro Dalcin NULL, 1266f4259b30SLisandro Dalcin NULL, 1267f4259b30SLisandro Dalcin NULL, 1268f4259b30SLisandro Dalcin NULL, 1269d519adbfSMatthew Knepley /* 39*/ MatAXPY_MPIDense, 12707dae84e0SHong Zhang MatCreateSubMatrices_MPIDense, 1271f4259b30SLisandro Dalcin NULL, 127209dc0095SBarry Smith MatGetValues_MPIDense, 1273a76f77c3SStefano Zampini MatCopy_MPIDense, 1274f4259b30SLisandro Dalcin /* 44*/ NULL, 127509dc0095SBarry Smith MatScale_MPIDense, 12762f605a99SJose E. Roman MatShift_MPIDense, 1277f4259b30SLisandro Dalcin NULL, 1278f4259b30SLisandro Dalcin NULL, 127973a71a0fSBarry Smith /* 49*/ MatSetRandom_MPIDense, 1280f4259b30SLisandro Dalcin NULL, 1281f4259b30SLisandro Dalcin NULL, 1282f4259b30SLisandro Dalcin NULL, 1283f4259b30SLisandro Dalcin NULL, 1284f4259b30SLisandro Dalcin /* 54*/ NULL, 1285f4259b30SLisandro Dalcin NULL, 1286f4259b30SLisandro Dalcin NULL, 1287f4259b30SLisandro Dalcin NULL, 1288f4259b30SLisandro Dalcin NULL, 12897dae84e0SHong Zhang /* 59*/ MatCreateSubMatrix_MPIDense, 1290b9b97703SBarry Smith MatDestroy_MPIDense, 1291b9b97703SBarry Smith MatView_MPIDense, 1292f4259b30SLisandro Dalcin NULL, 1293f4259b30SLisandro Dalcin NULL, 1294f4259b30SLisandro Dalcin /* 64*/ NULL, 1295f4259b30SLisandro Dalcin NULL, 1296f4259b30SLisandro Dalcin NULL, 1297f4259b30SLisandro Dalcin NULL, 1298f4259b30SLisandro Dalcin NULL, 1299f4259b30SLisandro Dalcin /* 69*/ NULL, 1300f4259b30SLisandro Dalcin NULL, 1301f4259b30SLisandro Dalcin NULL, 1302f4259b30SLisandro Dalcin NULL, 1303f4259b30SLisandro Dalcin NULL, 1304f4259b30SLisandro Dalcin /* 74*/ NULL, 1305f4259b30SLisandro Dalcin NULL, 1306f4259b30SLisandro Dalcin NULL, 1307f4259b30SLisandro Dalcin NULL, 13088bb0f5c6SPierre Jolivet MatLoad_MPIDense, 1309f4259b30SLisandro Dalcin /* 79*/ NULL, 1310f4259b30SLisandro Dalcin NULL, 1311f4259b30SLisandro Dalcin NULL, 1312f4259b30SLisandro Dalcin NULL, 13138bb0f5c6SPierre Jolivet /* 83*/ NULL, 1314f4259b30SLisandro Dalcin NULL, 1315f4259b30SLisandro Dalcin NULL, 1316f4259b30SLisandro Dalcin NULL, 13176718818eSStefano Zampini MatMatTransposeMultSymbolic_MPIDense_MPIDense, 1318cc48ffa7SToby Isaac MatMatTransposeMultNumeric_MPIDense_MPIDense, 13198bb0f5c6SPierre Jolivet /* 89*/ NULL, 13208bb0f5c6SPierre Jolivet MatProductSetFromOptions_MPIDense, 1321f4259b30SLisandro Dalcin NULL, 1322f4259b30SLisandro Dalcin NULL, 1323ba337c44SJed Brown MatConjugate_MPIDense, 13248bb0f5c6SPierre Jolivet /* 94*/ NULL, 1325f4259b30SLisandro Dalcin NULL, 1326ba337c44SJed Brown MatRealPart_MPIDense, 1327ba337c44SJed Brown MatImaginaryPart_MPIDense, 1328f4259b30SLisandro Dalcin NULL, 13298bb0f5c6SPierre Jolivet /*99*/ NULL, 13308bb0f5c6SPierre Jolivet NULL, 13318bb0f5c6SPierre Jolivet NULL, 13328bb0f5c6SPierre Jolivet NULL, 13338bb0f5c6SPierre Jolivet MatGetColumnVector_MPIDense, 13348bb0f5c6SPierre Jolivet /*104*/ MatMissingDiagonal_MPIDense, 13358bb0f5c6SPierre Jolivet NULL, 13368bb0f5c6SPierre Jolivet NULL, 13378bb0f5c6SPierre Jolivet NULL, 1338f4259b30SLisandro Dalcin NULL, 1339f4259b30SLisandro Dalcin /*109*/ NULL, 1340f4259b30SLisandro Dalcin NULL, 1341f4259b30SLisandro Dalcin NULL, 1342459e8d23SBlanca Mellado Pinto MatMultHermitianTranspose_MPIDense, 1343459e8d23SBlanca Mellado Pinto MatMultHermitianTransposeAdd_MPIDense, 13448bb0f5c6SPierre Jolivet /*114*/ NULL, 13458bb0f5c6SPierre Jolivet NULL, 13468bb0f5c6SPierre Jolivet MatGetColumnReductions_MPIDense, 13478bb0f5c6SPierre Jolivet NULL, 13488bb0f5c6SPierre Jolivet NULL, 13498bb0f5c6SPierre Jolivet NULL, 13508bb0f5c6SPierre Jolivet /*120*/ NULL, 13518bb0f5c6SPierre Jolivet MatTransposeMatMultSymbolic_MPIDense_MPIDense, 13528bb0f5c6SPierre Jolivet MatTransposeMatMultNumeric_MPIDense_MPIDense, 1353f4259b30SLisandro Dalcin NULL, 1354f4259b30SLisandro Dalcin /*124*/ NULL, 13558bb0f5c6SPierre Jolivet NULL, 1356f4259b30SLisandro Dalcin NULL, 1357f4259b30SLisandro Dalcin NULL, 1358f4259b30SLisandro Dalcin NULL, 1359f4259b30SLisandro Dalcin /*129*/ NULL, 1360f4259b30SLisandro Dalcin NULL, 13618bb0f5c6SPierre Jolivet MatCreateMPIMatConcatenateSeqMat_MPIDense, 13628bb0f5c6SPierre Jolivet NULL, 1363f4259b30SLisandro Dalcin NULL, 1364f4259b30SLisandro Dalcin /*134*/ NULL, 1365f4259b30SLisandro Dalcin NULL, 1366f4259b30SLisandro Dalcin NULL, 1367f4259b30SLisandro Dalcin NULL, 1368f4259b30SLisandro Dalcin NULL, 1369f4259b30SLisandro Dalcin /*139*/ NULL, 1370f4259b30SLisandro Dalcin NULL, 1371f4259b30SLisandro Dalcin NULL, 137203db1824SAlex Lindsay NULL, 1373dec0b466SHong Zhang NULL}; 13748965ea79SLois Curfman McInnes 137566976f2fSJacob Faibussowitsch static PetscErrorCode MatMPIDenseSetPreallocation_MPIDense(Mat mat, PetscScalar *data) 1376d71ae5a4SJacob Faibussowitsch { 1377637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 137847d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 1379a23d5eceSKris Buschelman 1380a23d5eceSKris Buschelman PetscFunctionBegin; 138128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 13829566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->rmap)); 13839566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->cmap)); 1384637a0070SStefano Zampini if (!a->A) { 13859566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 13869566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, mat->rmap->n, mat->cmap->N, mat->rmap->n, mat->cmap->N)); 1387637a0070SStefano Zampini } 138847d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 138947d993e7Ssuyashtn PetscBool iscuda; 13909566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSECUDA, &iscuda)); 139147d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 139247d993e7Ssuyashtn #endif 139347d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 139447d993e7Ssuyashtn PetscBool iship; 139547d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSEHIP, &iship)); 139647d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 139747d993e7Ssuyashtn #endif 139847d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 13999566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(a->A, data)); 140047d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 14013faff063SStefano Zampini mat->offloadmask = a->A->offloadmask; 14023faff063SStefano Zampini #endif 1403637a0070SStefano Zampini mat->preallocated = PETSC_TRUE; 14046f08ad05SPierre Jolivet mat->assembled = PETSC_TRUE; 14053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1406a23d5eceSKris Buschelman } 1407a23d5eceSKris Buschelman 1408d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1409d71ae5a4SJacob Faibussowitsch { 14104e29119aSPierre Jolivet Mat B, C; 14114e29119aSPierre Jolivet 14124e29119aSPierre Jolivet PetscFunctionBegin; 14139566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMat(A, MAT_INITIAL_MATRIX, &C)); 14149566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqDense(C, MATSEQDENSE, MAT_INITIAL_MATRIX, &B)); 14159566063dSJacob Faibussowitsch PetscCall(MatDestroy(&C)); 14164e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14174e29119aSPierre Jolivet C = *newmat; 14184e29119aSPierre Jolivet } else C = NULL; 14199566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14209566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 14214e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 14229566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 14234e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 14243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14254e29119aSPierre Jolivet } 14264e29119aSPierre Jolivet 142766976f2fSJacob Faibussowitsch static PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1428d71ae5a4SJacob Faibussowitsch { 14294e29119aSPierre Jolivet Mat B, C; 14304e29119aSPierre Jolivet 14314e29119aSPierre Jolivet PetscFunctionBegin; 14329566063dSJacob Faibussowitsch PetscCall(MatDenseGetLocalMatrix(A, &C)); 14339566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqDense_SeqAIJ(C, MATSEQAIJ, MAT_INITIAL_MATRIX, &B)); 14344e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14354e29119aSPierre Jolivet C = *newmat; 14364e29119aSPierre Jolivet } else C = NULL; 14379566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14389566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 14394e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 14409566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 14414e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 14423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14434e29119aSPierre Jolivet } 14444e29119aSPierre Jolivet 144565b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 1446d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1447d71ae5a4SJacob Faibussowitsch { 1448f709e8d7SPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14498ea901baSHong Zhang Mat mat_elemental; 145032d7a744SHong Zhang PetscScalar *v; 1451f709e8d7SPierre Jolivet PetscInt m = A->rmap->n, N = A->cmap->N, rstart = A->rmap->rstart, i, *rows, *cols, lda; 14528ea901baSHong Zhang 14538baccfbdSHong Zhang PetscFunctionBegin; 1454378336b6SHong Zhang if (reuse == MAT_REUSE_MATRIX) { 1455378336b6SHong Zhang mat_elemental = *newmat; 14569566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(*newmat)); 1457378336b6SHong Zhang } else { 14589566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental)); 14599566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat_elemental, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 14609566063dSJacob Faibussowitsch PetscCall(MatSetType(mat_elemental, MATELEMENTAL)); 14619566063dSJacob Faibussowitsch PetscCall(MatSetUp(mat_elemental)); 14629566063dSJacob Faibussowitsch PetscCall(MatSetOption(mat_elemental, MAT_ROW_ORIENTED, PETSC_FALSE)); 1463378336b6SHong Zhang } 1464378336b6SHong Zhang 14659566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &rows, N, &cols)); 146632d7a744SHong Zhang for (i = 0; i < N; i++) cols[i] = i; 146732d7a744SHong Zhang for (i = 0; i < m; i++) rows[i] = rstart + i; 14688ea901baSHong Zhang 1469637a0070SStefano Zampini /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */ 14709566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(A, &v)); 1471f709e8d7SPierre Jolivet PetscCall(MatDenseGetLDA(a->A, &lda)); 1472f709e8d7SPierre Jolivet if (lda == m) PetscCall(MatSetValues(mat_elemental, m, rows, N, cols, v, ADD_VALUES)); 1473f709e8d7SPierre Jolivet else { 1474f709e8d7SPierre Jolivet for (i = 0; i < N; i++) PetscCall(MatSetValues(mat_elemental, m, rows, 1, &i, v + lda * i, ADD_VALUES)); 1475f709e8d7SPierre Jolivet } 14769566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY)); 14779566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY)); 14789566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(A, &v)); 14799566063dSJacob Faibussowitsch PetscCall(PetscFree2(rows, cols)); 14808ea901baSHong Zhang 1481511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 14829566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &mat_elemental)); 14838ea901baSHong Zhang } else { 14848ea901baSHong Zhang *newmat = mat_elemental; 14858ea901baSHong Zhang } 14863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14878baccfbdSHong Zhang } 148865b80a83SHong Zhang #endif 14898baccfbdSHong Zhang 1490d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A, PetscInt col, PetscScalar **vals) 1491d71ae5a4SJacob Faibussowitsch { 149286aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 149386aefd0dSHong Zhang 149486aefd0dSHong Zhang PetscFunctionBegin; 14959566063dSJacob Faibussowitsch PetscCall(MatDenseGetColumn(mat->A, col, vals)); 14963ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 149786aefd0dSHong Zhang } 149886aefd0dSHong Zhang 1499d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A, PetscScalar **vals) 1500d71ae5a4SJacob Faibussowitsch { 150186aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 150286aefd0dSHong Zhang 150386aefd0dSHong Zhang PetscFunctionBegin; 15049566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreColumn(mat->A, vals)); 15053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 150686aefd0dSHong Zhang } 150786aefd0dSHong Zhang 1508d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm, Mat inmat, PetscInt n, MatReuse scall, Mat *outmat) 1509d71ae5a4SJacob Faibussowitsch { 151094e2cb23SJakub Kruzik Mat_MPIDense *mat; 151194e2cb23SJakub Kruzik PetscInt m, nloc, N; 151294e2cb23SJakub Kruzik 151394e2cb23SJakub Kruzik PetscFunctionBegin; 15149566063dSJacob Faibussowitsch PetscCall(MatGetSize(inmat, &m, &N)); 15159566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(inmat, NULL, &nloc)); 151694e2cb23SJakub Kruzik if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */ 151794e2cb23SJakub Kruzik PetscInt sum; 151894e2cb23SJakub Kruzik 151948a46eb9SPierre Jolivet if (n == PETSC_DECIDE) PetscCall(PetscSplitOwnership(comm, &n, &N)); 152094e2cb23SJakub Kruzik /* Check sum(n) = N */ 1521462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(&n, &sum, 1, MPIU_INT, MPI_SUM, comm)); 152208401ef6SPierre Jolivet PetscCheck(sum == N, PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT, sum, N); 152394e2cb23SJakub Kruzik 15249566063dSJacob Faibussowitsch PetscCall(MatCreateDense(comm, m, n, PETSC_DETERMINE, N, NULL, outmat)); 15259566063dSJacob Faibussowitsch PetscCall(MatSetOption(*outmat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 152694e2cb23SJakub Kruzik } 152794e2cb23SJakub Kruzik 152894e2cb23SJakub Kruzik /* numeric phase */ 152994e2cb23SJakub Kruzik mat = (Mat_MPIDense *)(*outmat)->data; 15309566063dSJacob Faibussowitsch PetscCall(MatCopy(inmat, mat->A, SAME_NONZERO_PATTERN)); 15313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 153294e2cb23SJakub Kruzik } 153394e2cb23SJakub Kruzik 1534d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1535d71ae5a4SJacob Faibussowitsch { 15366947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15376947451fSStefano Zampini PetscInt lda; 15386947451fSStefano Zampini 15396947451fSStefano Zampini PetscFunctionBegin; 154028b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 154128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1542d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 15436947451fSStefano Zampini a->vecinuse = col + 1; 15449566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 15459566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, (PetscScalar **)&a->ptrinuse)); 15468e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 15476947451fSStefano Zampini *v = a->cvec; 15483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15496947451fSStefano Zampini } 15506947451fSStefano Zampini 1551d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1552d71ae5a4SJacob Faibussowitsch { 15536947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15546947451fSStefano Zampini 15556947451fSStefano Zampini PetscFunctionBegin; 155628b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 155728b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector"); 15584186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 15596947451fSStefano Zampini a->vecinuse = 0; 15609566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, (PetscScalar **)&a->ptrinuse)); 15619566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1562742765d3SMatthew Knepley if (v) *v = NULL; 15633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15646947451fSStefano Zampini } 15656947451fSStefano Zampini 1566d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1567d71ae5a4SJacob Faibussowitsch { 15686947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15696947451fSStefano Zampini PetscInt lda; 15706947451fSStefano Zampini 15716947451fSStefano Zampini PetscFunctionBegin; 157228b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 157328b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1574d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 15756947451fSStefano Zampini a->vecinuse = col + 1; 15769566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 15779566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &a->ptrinuse)); 15788e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 15799566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(a->cvec)); 15806947451fSStefano Zampini *v = a->cvec; 15813ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15826947451fSStefano Zampini } 15836947451fSStefano Zampini 1584d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1585d71ae5a4SJacob Faibussowitsch { 15866947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15876947451fSStefano Zampini 15886947451fSStefano Zampini PetscFunctionBegin; 15895f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 15905f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 15914186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 15926947451fSStefano Zampini a->vecinuse = 0; 15939566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &a->ptrinuse)); 15949566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(a->cvec)); 15959566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1596742765d3SMatthew Knepley if (v) *v = NULL; 15973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15986947451fSStefano Zampini } 15996947451fSStefano Zampini 1600d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1601d71ae5a4SJacob Faibussowitsch { 16026947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16036947451fSStefano Zampini PetscInt lda; 16046947451fSStefano Zampini 16056947451fSStefano Zampini PetscFunctionBegin; 16065f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 16075f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1608d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 16096947451fSStefano Zampini a->vecinuse = col + 1; 16109566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 16119566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 16128e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 16136947451fSStefano Zampini *v = a->cvec; 16143ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16156947451fSStefano Zampini } 16166947451fSStefano Zampini 1617d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1618d71ae5a4SJacob Faibussowitsch { 16196947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16206947451fSStefano Zampini 16216947451fSStefano Zampini PetscFunctionBegin; 16225f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 16235f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 16244186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 16256947451fSStefano Zampini a->vecinuse = 0; 16269566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 16279566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1628742765d3SMatthew Knepley if (v) *v = NULL; 16293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16306947451fSStefano Zampini } 16316947451fSStefano Zampini 163266976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A, PetscInt rbegin, PetscInt rend, PetscInt cbegin, PetscInt cend, Mat *v) 1633d71ae5a4SJacob Faibussowitsch { 16345ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1635616b8fbbSStefano Zampini Mat_MPIDense *c; 1636616b8fbbSStefano Zampini MPI_Comm comm; 1637d016bddeSToby Isaac PetscInt prbegin, prend, pcbegin, pcend; 16385ea7661aSPierre Jolivet 16395ea7661aSPierre Jolivet PetscFunctionBegin; 16409566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 16415f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 16425f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1643d016bddeSToby Isaac prbegin = PetscMax(0, PetscMin(A->rmap->rend, rbegin) - A->rmap->rstart); 1644d016bddeSToby Isaac prend = PetscMin(A->rmap->n, PetscMax(0, rend - A->rmap->rstart)); 1645d016bddeSToby Isaac pcbegin = PetscMax(0, PetscMin(A->cmap->rend, cbegin) - A->cmap->rstart); 1646d016bddeSToby Isaac pcend = PetscMin(A->cmap->n, PetscMax(0, cend - A->cmap->rstart)); 16475ea7661aSPierre Jolivet if (!a->cmat) { 16489566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &a->cmat)); 16499566063dSJacob Faibussowitsch PetscCall(MatSetType(a->cmat, ((PetscObject)A)->type_name)); 1650a2748737SPierre Jolivet if (rend - rbegin == A->rmap->N) PetscCall(PetscLayoutReference(A->rmap, &a->cmat->rmap)); 1651a2748737SPierre Jolivet else { 1652d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, prend - prbegin)); 1653a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1654a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1655a2748737SPierre Jolivet } 1656d016bddeSToby Isaac if (cend - cbegin == A->cmap->N) PetscCall(PetscLayoutReference(A->cmap, &a->cmat->cmap)); 1657d016bddeSToby Isaac else { 1658d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->cmap, pcend - pcbegin)); 16599566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 16609566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1661a2748737SPierre Jolivet } 1662616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 1663d016bddeSToby Isaac c->sub_rbegin = rbegin; 1664d016bddeSToby Isaac c->sub_rend = rend; 1665d016bddeSToby Isaac c->sub_cbegin = cbegin; 1666d016bddeSToby Isaac c->sub_cend = cend; 1667d016bddeSToby Isaac } 1668d016bddeSToby Isaac c = (Mat_MPIDense *)a->cmat->data; 1669d016bddeSToby Isaac if (c->sub_rbegin != rbegin || c->sub_rend != rend) { 1670d016bddeSToby Isaac PetscCall(PetscLayoutDestroy(&a->cmat->rmap)); 1671d016bddeSToby Isaac PetscCall(PetscLayoutCreate(comm, &a->cmat->rmap)); 1672d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, prend - prbegin)); 1673d016bddeSToby Isaac PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1674d016bddeSToby Isaac PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1675d016bddeSToby Isaac c->sub_rbegin = rbegin; 1676d016bddeSToby Isaac c->sub_rend = rend; 1677d016bddeSToby Isaac } 1678d016bddeSToby Isaac if (c->sub_cbegin != cbegin || c->sub_cend != cend) { 1679d016bddeSToby Isaac // special optimization: check if all columns are owned by rank 0, in which case no communication is necessary 1680d016bddeSToby Isaac if ((cend - cbegin != a->cmat->cmap->N) || (A->cmap->range[1] != A->cmap->N)) { 1681d016bddeSToby Isaac PetscCall(PetscLayoutDestroy(&a->cmat->cmap)); 1682d016bddeSToby Isaac PetscCall(PetscLayoutCreate(comm, &a->cmat->cmap)); 1683d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->cmap, pcend - pcbegin)); 1684d016bddeSToby Isaac PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 1685d016bddeSToby Isaac PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1686d016bddeSToby Isaac PetscCall(VecDestroy(&c->lvec)); 1687d016bddeSToby Isaac PetscCall(PetscSFDestroy(&c->Mvctx)); 1688d016bddeSToby Isaac } 1689d016bddeSToby Isaac c->sub_cbegin = cbegin; 1690d016bddeSToby Isaac c->sub_cend = cend; 1691d016bddeSToby Isaac } 16925f80ce2aSJacob Faibussowitsch PetscCheck(!c->A, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1693d016bddeSToby Isaac PetscCall(MatDenseGetSubMatrix(a->A, prbegin, prend, cbegin, cend, &c->A)); 16943faff063SStefano Zampini 1695616b8fbbSStefano Zampini a->cmat->preallocated = PETSC_TRUE; 1696616b8fbbSStefano Zampini a->cmat->assembled = PETSC_TRUE; 16973faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 16983faff063SStefano Zampini a->cmat->offloadmask = c->A->offloadmask; 16993faff063SStefano Zampini #endif 17005ea7661aSPierre Jolivet a->matinuse = cbegin + 1; 17015ea7661aSPierre Jolivet *v = a->cmat; 17023ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 17035ea7661aSPierre Jolivet } 17045ea7661aSPierre Jolivet 170566976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A, Mat *v) 1706d71ae5a4SJacob Faibussowitsch { 17075ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1708616b8fbbSStefano Zampini Mat_MPIDense *c; 17095ea7661aSPierre Jolivet 17105ea7661aSPierre Jolivet PetscFunctionBegin; 17115f80ce2aSJacob Faibussowitsch PetscCheck(a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetSubMatrix() first"); 17125f80ce2aSJacob Faibussowitsch PetscCheck(a->cmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal matrix"); 17135f80ce2aSJacob Faibussowitsch PetscCheck(*v == a->cmat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Not the matrix obtained from MatDenseGetSubMatrix()"); 17145ea7661aSPierre Jolivet a->matinuse = 0; 1715616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 17169566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreSubMatrix(a->A, &c->A)); 1717742765d3SMatthew Knepley if (v) *v = NULL; 17183faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 17193faff063SStefano Zampini A->offloadmask = a->A->offloadmask; 17203faff063SStefano Zampini #endif 17213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 17225ea7661aSPierre Jolivet } 17235ea7661aSPierre Jolivet 1724002bc6daSRichard Tran Mills /*MC 1725002bc6daSRichard Tran Mills MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices. 1726002bc6daSRichard Tran Mills 17272ef1f0ffSBarry Smith Options Database Key: 172811a5261eSBarry Smith . -mat_type mpidense - sets the matrix type to `MATMPIDENSE` during a call to `MatSetFromOptions()` 1729002bc6daSRichard Tran Mills 1730002bc6daSRichard Tran Mills Level: beginner 1731002bc6daSRichard Tran Mills 17321cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreateDense()`, `MATSEQDENSE`, `MATDENSE` 1733002bc6daSRichard Tran Mills M*/ 17344742e46bSJacob Faibussowitsch PetscErrorCode MatCreate_MPIDense(Mat mat) 1735d71ae5a4SJacob Faibussowitsch { 1736273d9f13SBarry Smith Mat_MPIDense *a; 1737273d9f13SBarry Smith 1738273d9f13SBarry Smith PetscFunctionBegin; 17394dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&a)); 1740b0a32e0cSBarry Smith mat->data = (void *)a; 1741aea10558SJacob Faibussowitsch mat->ops[0] = MatOps_Values; 1742273d9f13SBarry Smith 1743273d9f13SBarry Smith mat->insertmode = NOT_SET_VALUES; 1744273d9f13SBarry Smith 1745273d9f13SBarry Smith /* build cache for off array entries formed */ 1746273d9f13SBarry Smith a->donotstash = PETSC_FALSE; 17472205254eSKarl Rupp 17489566063dSJacob Faibussowitsch PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat), 1, &mat->stash)); 1749273d9f13SBarry Smith 1750273d9f13SBarry Smith /* stuff used for matrix vector multiply */ 1751f4259b30SLisandro Dalcin a->lvec = NULL; 1752f4259b30SLisandro Dalcin a->Mvctx = NULL; 1753273d9f13SBarry Smith a->roworiented = PETSC_TRUE; 1754273d9f13SBarry Smith 17559566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", MatDenseGetLDA_MPIDense)); 17569566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", MatDenseSetLDA_MPIDense)); 17579566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", MatDenseGetArray_MPIDense)); 17589566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", MatDenseRestoreArray_MPIDense)); 17599566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", MatDenseGetArrayRead_MPIDense)); 17609566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", MatDenseRestoreArrayRead_MPIDense)); 17619566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", MatDenseGetArrayWrite_MPIDense)); 17629566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", MatDenseRestoreArrayWrite_MPIDense)); 17639566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", MatDensePlaceArray_MPIDense)); 17649566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", MatDenseResetArray_MPIDense)); 17659566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", MatDenseReplaceArray_MPIDense)); 17669566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense)); 17679566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense)); 17689566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense)); 17699566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense)); 17709566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense)); 17719566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense)); 17729566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", MatDenseGetSubMatrix_MPIDense)); 17739566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", MatDenseRestoreSubMatrix_MPIDense)); 17749566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", MatConvert_MPIAIJ_MPIDense)); 17759566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", MatConvert_MPIDense_MPIAIJ)); 17768baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 17779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", MatConvert_MPIDense_Elemental)); 17788baccfbdSHong Zhang #endif 1779d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 17809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", MatConvert_Dense_ScaLAPACK)); 1781d24d4204SJose E. Roman #endif 1782637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 17839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", MatConvert_MPIDense_MPIDenseCUDA)); 1784637a0070SStefano Zampini #endif 17859566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", MatMPIDenseSetPreallocation_MPIDense)); 17869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 17879566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 17886718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 17899566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 17909566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 17916718818eSStefano Zampini #endif 179247d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 179347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", MatConvert_MPIDense_MPIDenseHIP)); 179447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 179547d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 179647d993e7Ssuyashtn #endif 17979566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", MatDenseGetColumn_MPIDense)); 17989566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", MatDenseRestoreColumn_MPIDense)); 1799d016bddeSToby Isaac PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultColumnRange_C", MatMultColumnRange_MPIDense)); 18000be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultAddColumnRange_C", MatMultAddColumnRange_MPIDense)); 18010be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeColumnRange_C", MatMultHermitianTransposeColumnRange_MPIDense)); 18020be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeAddColumnRange_C", MatMultHermitianTransposeAddColumnRange_MPIDense)); 18039566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATMPIDENSE)); 18043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1805273d9f13SBarry Smith } 1806273d9f13SBarry Smith 1807209238afSKris Buschelman /*MC 1808002d173eSKris Buschelman MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices. 1809209238afSKris Buschelman 181011a5261eSBarry Smith This matrix type is identical to `MATSEQDENSE` when constructed with a single process communicator, 181111a5261eSBarry Smith and `MATMPIDENSE` otherwise. 1812209238afSKris Buschelman 18132ef1f0ffSBarry Smith Options Database Key: 181411a5261eSBarry Smith . -mat_type dense - sets the matrix type to `MATDENSE` during a call to `MatSetFromOptions()` 1815209238afSKris Buschelman 1816209238afSKris Buschelman Level: beginner 1817209238afSKris Buschelman 18181cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATSEQDENSE`, `MATMPIDENSE`, `MATDENSECUDA`, `MATDENSEHIP` 18196947451fSStefano Zampini M*/ 18206947451fSStefano Zampini 18215d83a8b1SBarry Smith /*@ 1822273d9f13SBarry Smith MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries 1823273d9f13SBarry Smith 18248f490ea3SStefano Zampini Collective 1825273d9f13SBarry Smith 1826273d9f13SBarry Smith Input Parameters: 1827fe59aa6dSJacob Faibussowitsch + B - the matrix 18282ef1f0ffSBarry Smith - data - optional location of matrix data. Set to `NULL` for PETSc 1829273d9f13SBarry Smith to control all matrix memory allocation. 1830273d9f13SBarry Smith 18312ef1f0ffSBarry Smith Level: intermediate 18322ef1f0ffSBarry Smith 1833273d9f13SBarry Smith Notes: 18342ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 1835273d9f13SBarry Smith storage by columns. 1836273d9f13SBarry Smith 1837273d9f13SBarry Smith The data input variable is intended primarily for Fortran programmers 1838273d9f13SBarry Smith who wish to allocate their own matrix memory space. Most users should 18392ef1f0ffSBarry Smith set `data` to `NULL`. 1840273d9f13SBarry Smith 18411cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMPIDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 1842273d9f13SBarry Smith @*/ 1843d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMPIDenseSetPreallocation(Mat B, PetscScalar *data) 1844d71ae5a4SJacob Faibussowitsch { 1845273d9f13SBarry Smith PetscFunctionBegin; 1846d5ea218eSStefano Zampini PetscValidHeaderSpecific(B, MAT_CLASSID, 1); 1847cac4c232SBarry Smith PetscTryMethod(B, "MatMPIDenseSetPreallocation_C", (Mat, PetscScalar *), (B, data)); 18483ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1849273d9f13SBarry Smith } 1850273d9f13SBarry Smith 1851d3042a70SBarry Smith /*@ 185211a5261eSBarry Smith MatDensePlaceArray - Allows one to replace the array in a `MATDENSE` matrix with an 1853d3042a70SBarry Smith array provided by the user. This is useful to avoid copying an array 1854d3042a70SBarry Smith into a matrix 1855d3042a70SBarry Smith 1856d3042a70SBarry Smith Not Collective 1857d3042a70SBarry Smith 1858d3042a70SBarry Smith Input Parameters: 1859d3042a70SBarry Smith + mat - the matrix 1860d3042a70SBarry Smith - array - the array in column major order 1861d3042a70SBarry Smith 18622ef1f0ffSBarry Smith Level: developer 18632ef1f0ffSBarry Smith 186411a5261eSBarry Smith Note: 18654d5500e8SJunchao Zhang Adding `const` to `array` was an oversight, see notes in `VecPlaceArray()`. 18664d5500e8SJunchao Zhang 186711a5261eSBarry Smith You can return to the original array with a call to `MatDenseResetArray()`. The user is responsible for freeing this array; it will not be 1868d3042a70SBarry Smith freed when the matrix is destroyed. 1869d3042a70SBarry Smith 18701cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`, 187111a5261eSBarry Smith `MatDenseReplaceArray()` 1872d3042a70SBarry Smith @*/ 1873d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDensePlaceArray(Mat mat, const PetscScalar *array) 1874d71ae5a4SJacob Faibussowitsch { 1875d3042a70SBarry Smith PetscFunctionBegin; 1876d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1877cac4c232SBarry Smith PetscUseMethod(mat, "MatDensePlaceArray_C", (Mat, const PetscScalar *), (mat, array)); 18789566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 187947d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1880637a0070SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1881637a0070SStefano Zampini #endif 18823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1883d3042a70SBarry Smith } 1884d3042a70SBarry Smith 1885d3042a70SBarry Smith /*@ 188611a5261eSBarry Smith MatDenseResetArray - Resets the matrix array to that it previously had before the call to `MatDensePlaceArray()` 1887d3042a70SBarry Smith 1888d3042a70SBarry Smith Not Collective 1889d3042a70SBarry Smith 18902fe279fdSBarry Smith Input Parameter: 1891d3042a70SBarry Smith . mat - the matrix 1892d3042a70SBarry Smith 18932ef1f0ffSBarry Smith Level: developer 18942ef1f0ffSBarry Smith 189511a5261eSBarry Smith Note: 189611a5261eSBarry Smith You can only call this after a call to `MatDensePlaceArray()` 1897d3042a70SBarry Smith 18981cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()` 1899d3042a70SBarry Smith @*/ 1900d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseResetArray(Mat mat) 1901d71ae5a4SJacob Faibussowitsch { 1902d3042a70SBarry Smith PetscFunctionBegin; 1903d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1904cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseResetArray_C", (Mat), (mat)); 19059566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 19063ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1907d3042a70SBarry Smith } 1908d3042a70SBarry Smith 1909d5ea218eSStefano Zampini /*@ 1910d5ea218eSStefano Zampini MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an 1911d5ea218eSStefano Zampini array provided by the user. This is useful to avoid copying an array 1912d5ea218eSStefano Zampini into a matrix 1913d5ea218eSStefano Zampini 1914d5ea218eSStefano Zampini Not Collective 1915d5ea218eSStefano Zampini 1916d5ea218eSStefano Zampini Input Parameters: 1917d5ea218eSStefano Zampini + mat - the matrix 1918d5ea218eSStefano Zampini - array - the array in column major order 1919d5ea218eSStefano Zampini 19202ef1f0ffSBarry Smith Level: developer 19212ef1f0ffSBarry Smith 192211a5261eSBarry Smith Note: 19234d5500e8SJunchao Zhang Adding `const` to `array` was an oversight, see notes in `VecPlaceArray()`. 19244d5500e8SJunchao Zhang 192511a5261eSBarry Smith The memory passed in MUST be obtained with `PetscMalloc()` and CANNOT be 1926d5ea218eSStefano Zampini freed by the user. It will be freed when the matrix is destroyed. 1927d5ea218eSStefano Zampini 19281cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatDensePlaceArray()`, `MatDenseGetArray()`, `VecReplaceArray()` 1929d5ea218eSStefano Zampini @*/ 1930d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseReplaceArray(Mat mat, const PetscScalar *array) 1931d71ae5a4SJacob Faibussowitsch { 1932d5ea218eSStefano Zampini PetscFunctionBegin; 1933d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1934cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseReplaceArray_C", (Mat, const PetscScalar *), (mat, array)); 19359566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 193647d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1937d5ea218eSStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1938d5ea218eSStefano Zampini #endif 19393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1940d5ea218eSStefano Zampini } 1941d5ea218eSStefano Zampini 19425d83a8b1SBarry Smith /*@ 194311a5261eSBarry Smith MatCreateDense - Creates a matrix in `MATDENSE` format. 19448965ea79SLois Curfman McInnes 1945d083f849SBarry Smith Collective 1946db81eaa0SLois Curfman McInnes 19478965ea79SLois Curfman McInnes Input Parameters: 1948db81eaa0SLois Curfman McInnes + comm - MPI communicator 19492ef1f0ffSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if `M` is given) 19502ef1f0ffSBarry Smith . n - number of local columns (or `PETSC_DECIDE` to have calculated if `N` is given) 19512ef1f0ffSBarry Smith . M - number of global rows (or `PETSC_DECIDE` to have calculated if `m` is given) 19522ef1f0ffSBarry Smith . N - number of global columns (or `PETSC_DECIDE` to have calculated if `n` is given) 19532c5cda21SPierre Jolivet - data - optional location of matrix data. Set data to `NULL` (`PETSC_NULL_SCALAR_ARRAY` for Fortran users) for PETSc 1954dfc5480cSLois Curfman McInnes to control all matrix memory allocation. 19558965ea79SLois Curfman McInnes 19568965ea79SLois Curfman McInnes Output Parameter: 1957477f1c0bSLois Curfman McInnes . A - the matrix 19588965ea79SLois Curfman McInnes 19592ef1f0ffSBarry Smith Level: intermediate 19602ef1f0ffSBarry Smith 1961b259b22eSLois Curfman McInnes Notes: 19622ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 196339ddd567SLois Curfman McInnes storage by columns. 196411a5261eSBarry Smith 196511a5261eSBarry Smith Although local portions of the matrix are stored in column-major 1966002bc6daSRichard Tran Mills order, the matrix is partitioned across MPI ranks by row. 19678965ea79SLois Curfman McInnes 196818f449edSLois Curfman McInnes The data input variable is intended primarily for Fortran programmers 196918f449edSLois Curfman McInnes who wish to allocate their own matrix memory space. Most users should 19702c5cda21SPierre Jolivet set `data` to `NULL` (`PETSC_NULL_SCALAR_ARRAY` for Fortran users). 197118f449edSLois Curfman McInnes 19728965ea79SLois Curfman McInnes The user MUST specify either the local or global matrix dimensions 19738965ea79SLois Curfman McInnes (possibly both). 19748965ea79SLois Curfman McInnes 19751cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 19768965ea79SLois Curfman McInnes @*/ 1977ce78bad3SBarry Smith PetscErrorCode MatCreateDense(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar data[], Mat *A) 1978d71ae5a4SJacob Faibussowitsch { 19793a40ed3dSBarry Smith PetscFunctionBegin; 19809566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 19819566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, M, N)); 19826f08ad05SPierre Jolivet PetscCall(MatSetType(*A, MATDENSE)); 19839566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(*A, data)); 19846f08ad05SPierre Jolivet PetscCall(MatMPIDenseSetPreallocation(*A, data)); 19853ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19868965ea79SLois Curfman McInnes } 19878965ea79SLois Curfman McInnes 1988d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDuplicate_MPIDense(Mat A, MatDuplicateOption cpvalues, Mat *newmat) 1989d71ae5a4SJacob Faibussowitsch { 19908965ea79SLois Curfman McInnes Mat mat; 19913501a2bdSLois Curfman McInnes Mat_MPIDense *a, *oldmat = (Mat_MPIDense *)A->data; 19928965ea79SLois Curfman McInnes 19933a40ed3dSBarry Smith PetscFunctionBegin; 1994f4259b30SLisandro Dalcin *newmat = NULL; 19959566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat)); 19969566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 19979566063dSJacob Faibussowitsch PetscCall(MatSetType(mat, ((PetscObject)A)->type_name)); 1998834f8fabSBarry Smith a = (Mat_MPIDense *)mat->data; 19995aa7edbeSHong Zhang 2000d5f3da31SBarry Smith mat->factortype = A->factortype; 2001c456f294SBarry Smith mat->assembled = PETSC_TRUE; 2002273d9f13SBarry Smith mat->preallocated = PETSC_TRUE; 20038965ea79SLois Curfman McInnes 2004e0fa3b82SLois Curfman McInnes mat->insertmode = NOT_SET_VALUES; 20053782ba37SSatish Balay a->donotstash = oldmat->donotstash; 2006e04c1aa4SHong Zhang 20079566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->rmap, &mat->rmap)); 20089566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->cmap, &mat->cmap)); 20098965ea79SLois Curfman McInnes 20109566063dSJacob Faibussowitsch PetscCall(MatDuplicate(oldmat->A, cpvalues, &a->A)); 201101b82886SBarry Smith 20128965ea79SLois Curfman McInnes *newmat = mat; 20133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20148965ea79SLois Curfman McInnes } 20158965ea79SLois Curfman McInnes 201666976f2fSJacob Faibussowitsch static PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer) 2017d71ae5a4SJacob Faibussowitsch { 201887d5ce66SSatish Balay PetscBool isbinary; 201987d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 202087d5ce66SSatish Balay PetscBool ishdf5; 202187d5ce66SSatish Balay #endif 2022eb91f321SVaclav Hapla 2023eb91f321SVaclav Hapla PetscFunctionBegin; 2024eb91f321SVaclav Hapla PetscValidHeaderSpecific(newMat, MAT_CLASSID, 1); 2025eb91f321SVaclav Hapla PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 2026eb91f321SVaclav Hapla /* force binary viewer to load .info file if it has not yet done so */ 20279566063dSJacob Faibussowitsch PetscCall(PetscViewerSetUp(viewer)); 20289566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 202987d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 20309566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERHDF5, &ishdf5)); 203187d5ce66SSatish Balay #endif 2032eb91f321SVaclav Hapla if (isbinary) { 20339566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_Binary(newMat, viewer)); 2034eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5) 203587d5ce66SSatish Balay } else if (ishdf5) { 20369566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_HDF5(newMat, viewer)); 2037eb91f321SVaclav Hapla #endif 203898921bdaSJacob Faibussowitsch } else SETERRQ(PetscObjectComm((PetscObject)newMat), PETSC_ERR_SUP, "Viewer type %s not yet supported for reading %s matrices", ((PetscObject)viewer)->type_name, ((PetscObject)newMat)->type_name); 20393ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2040eb91f321SVaclav Hapla } 2041eb91f321SVaclav Hapla 2042d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatEqual_MPIDense(Mat A, Mat B, PetscBool *flag) 2043d71ae5a4SJacob Faibussowitsch { 20446e4ee0c6SHong Zhang Mat_MPIDense *matB = (Mat_MPIDense *)B->data, *matA = (Mat_MPIDense *)A->data; 20456e4ee0c6SHong Zhang Mat a, b; 204690ace30eSBarry Smith 20476e4ee0c6SHong Zhang PetscFunctionBegin; 20486e4ee0c6SHong Zhang a = matA->A; 20496e4ee0c6SHong Zhang b = matB->A; 20502cf15c64SPierre Jolivet PetscCall(MatEqual(a, b, flag)); 2051462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, flag, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 20523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20536e4ee0c6SHong Zhang } 205490ace30eSBarry Smith 205566976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data) 2056d71ae5a4SJacob Faibussowitsch { 20576718818eSStefano Zampini Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data; 2058baa3c1c6SHong Zhang 2059baa3c1c6SHong Zhang PetscFunctionBegin; 20609566063dSJacob Faibussowitsch PetscCall(PetscFree2(atb->sendbuf, atb->recvcounts)); 20619566063dSJacob Faibussowitsch PetscCall(MatDestroy(&atb->atb)); 20629566063dSJacob Faibussowitsch PetscCall(PetscFree(atb)); 20633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2064baa3c1c6SHong Zhang } 2065baa3c1c6SHong Zhang 206666976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data) 2067d71ae5a4SJacob Faibussowitsch { 20686718818eSStefano Zampini Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data; 2069cc48ffa7SToby Isaac 2070cc48ffa7SToby Isaac PetscFunctionBegin; 20719566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->buf[0], abt->buf[1])); 20729566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->recvcounts, abt->recvdispls)); 20739566063dSJacob Faibussowitsch PetscCall(PetscFree(abt)); 20743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2075cc48ffa7SToby Isaac } 2076cc48ffa7SToby Isaac 2077d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2078d71ae5a4SJacob Faibussowitsch { 2079baa3c1c6SHong Zhang Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 20806718818eSStefano Zampini Mat_TransMatMultDense *atb; 2081cb20be35SHong Zhang MPI_Comm comm; 20826718818eSStefano Zampini PetscMPIInt size, *recvcounts; 20836718818eSStefano Zampini PetscScalar *carray, *sendbuf; 2084637a0070SStefano Zampini const PetscScalar *atbarray; 2085a1f9a5e6SStefano Zampini PetscInt i, cN = C->cmap->N, proc, k, j, lda; 2086e68c0b26SHong Zhang const PetscInt *ranges; 2087cb20be35SHong Zhang 2088cb20be35SHong Zhang PetscFunctionBegin; 20896718818eSStefano Zampini MatCheckProduct(C, 3); 20905f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 20916718818eSStefano Zampini atb = (Mat_TransMatMultDense *)C->product->data; 20926718818eSStefano Zampini recvcounts = atb->recvcounts; 20936718818eSStefano Zampini sendbuf = atb->sendbuf; 20946718818eSStefano Zampini 20959566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 20969566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 2097e68c0b26SHong Zhang 2098c5ef1628SHong Zhang /* compute atbarray = aseq^T * bseq */ 2099fb842aefSJose E. Roman PetscCall(MatTransposeMatMult(a->A, b->A, atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX, PETSC_DETERMINE, &atb->atb)); 2100cb20be35SHong Zhang 21019566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 2102cb20be35SHong Zhang 2103d016bddeSToby Isaac if (ranges[1] == C->rmap->N) { 2104d016bddeSToby Isaac /* all of the values are being reduced to rank 0: optimize this case to use MPI_Reduce and GPU aware MPI if available */ 2105d016bddeSToby Isaac PetscInt atb_lda, c_lda; 2106d016bddeSToby Isaac Mat atb_local = atb->atb; 2107d016bddeSToby Isaac Mat atb_alloc = NULL; 2108d016bddeSToby Isaac Mat c_local = c->A; 2109d016bddeSToby Isaac Mat c_alloc = NULL; 2110d016bddeSToby Isaac PetscMemType atb_memtype, c_memtype; 2111d016bddeSToby Isaac const PetscScalar *atb_array = NULL; 2112d016bddeSToby Isaac MPI_Datatype vector_type; 2113d016bddeSToby Isaac PetscScalar *c_array = NULL; 2114d016bddeSToby Isaac PetscMPIInt rank; 2115d016bddeSToby Isaac 2116d016bddeSToby Isaac PetscCallMPI(MPI_Comm_rank(comm, &rank)); 2117d016bddeSToby Isaac 2118d016bddeSToby Isaac PetscCall(MatDenseGetLDA(atb_local, &atb_lda)); 2119d016bddeSToby Isaac if (atb_lda != C->rmap->N) { 2120d016bddeSToby Isaac // copy atb to a matrix that will have lda == the number of rows 2121d016bddeSToby Isaac PetscCall(MatDuplicate(atb_local, MAT_DO_NOT_COPY_VALUES, &atb_alloc)); 2122d016bddeSToby Isaac PetscCall(MatCopy(atb_local, atb_alloc, DIFFERENT_NONZERO_PATTERN)); 2123d016bddeSToby Isaac atb_local = atb_alloc; 2124d016bddeSToby Isaac } 2125d016bddeSToby Isaac 2126d016bddeSToby Isaac if (rank == 0) { 2127d016bddeSToby Isaac PetscCall(MatDenseGetLDA(c_local, &c_lda)); 2128d016bddeSToby Isaac if (c_lda != C->rmap->N) { 2129d016bddeSToby Isaac // copy c to a matrix that will have lda == the number of rows 2130d016bddeSToby Isaac PetscCall(MatDuplicate(c_local, MAT_DO_NOT_COPY_VALUES, &c_alloc)); 2131d016bddeSToby Isaac c_local = c_alloc; 2132d016bddeSToby Isaac } 2133d016bddeSToby Isaac PetscCall(MatZeroEntries(c_local)); 2134d016bddeSToby Isaac } 2135d016bddeSToby Isaac /* atb_local and c_local have nrows = lda = A->cmap->N and ncols = 2136d016bddeSToby Isaac * B->cmap->N: use the a->Mvctx to use the best reduction method */ 2137d016bddeSToby Isaac if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 2138d016bddeSToby Isaac vector_type = MPIU_SCALAR; 2139d016bddeSToby Isaac if (B->cmap->N > 1) { 2140b682a77bSToby Isaac PetscMPIInt mpi_N; 2141b682a77bSToby Isaac 2142b682a77bSToby Isaac PetscCall(PetscMPIIntCast(B->cmap->N, &mpi_N)); 2143b682a77bSToby Isaac PetscCallMPI(MPI_Type_contiguous(mpi_N, MPIU_SCALAR, &vector_type)); 2144d016bddeSToby Isaac PetscCallMPI(MPI_Type_commit(&vector_type)); 2145d016bddeSToby Isaac } 2146d016bddeSToby Isaac PetscCall(MatDenseGetArrayReadAndMemType(atb_local, &atb_array, &atb_memtype)); 2147d016bddeSToby Isaac PetscCall(MatDenseGetArrayWriteAndMemType(c_local, &c_array, &c_memtype)); 2148d016bddeSToby Isaac PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, vector_type, atb_memtype, atb_array, c_memtype, c_array, MPIU_SUM)); 2149d016bddeSToby Isaac PetscCall(PetscSFReduceEnd(a->Mvctx, vector_type, atb_array, c_array, MPIU_SUM)); 2150d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayWriteAndMemType(c_local, &c_array)); 2151d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayReadAndMemType(atb_local, &atb_array)); 2152d016bddeSToby Isaac if (rank == 0 && c_local != c->A) PetscCall(MatCopy(c_local, c->A, DIFFERENT_NONZERO_PATTERN)); 2153d016bddeSToby Isaac if (B->cmap->N > 1) PetscCallMPI(MPI_Type_free(&vector_type)); 2154d016bddeSToby Isaac PetscCall(MatDestroy(&atb_alloc)); 2155d016bddeSToby Isaac PetscCall(MatDestroy(&c_alloc)); 2156d016bddeSToby Isaac PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 2157d016bddeSToby Isaac PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 2158d016bddeSToby Isaac PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 2159d016bddeSToby Isaac PetscFunctionReturn(PETSC_SUCCESS); 2160d016bddeSToby Isaac } 2161d016bddeSToby Isaac 2162660d5466SHong Zhang /* arrange atbarray into sendbuf */ 21639566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(atb->atb, &atbarray)); 21649566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(atb->atb, &lda)); 2165637a0070SStefano Zampini for (proc = 0, k = 0; proc < size; proc++) { 2166baa3c1c6SHong Zhang for (j = 0; j < cN; j++) { 2167a1f9a5e6SStefano Zampini for (i = ranges[proc]; i < ranges[proc + 1]; i++) sendbuf[k++] = atbarray[i + j * lda]; 2168cb20be35SHong Zhang } 2169cb20be35SHong Zhang } 21709566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(atb->atb, &atbarray)); 2171637a0070SStefano Zampini 2172c5ef1628SHong Zhang /* sum all atbarray to local values of C */ 21739566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &carray)); 21749566063dSJacob Faibussowitsch PetscCallMPI(MPI_Reduce_scatter(sendbuf, carray, recvcounts, MPIU_SCALAR, MPIU_SUM, comm)); 21759566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &carray)); 217667af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 21779566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 21789566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 21793ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2180cb20be35SHong Zhang } 2181cb20be35SHong Zhang 2182d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2183d71ae5a4SJacob Faibussowitsch { 2184cb20be35SHong Zhang MPI_Comm comm; 2185baa3c1c6SHong Zhang PetscMPIInt size; 2186660d5466SHong Zhang PetscInt cm = A->cmap->n, cM, cN = B->cmap->N; 2187baa3c1c6SHong Zhang Mat_TransMatMultDense *atb; 218847d993e7Ssuyashtn PetscBool cisdense = PETSC_FALSE; 21890acaeb71SStefano Zampini const PetscInt *ranges; 2190cb20be35SHong Zhang 2191cb20be35SHong Zhang PetscFunctionBegin; 21928f83a4d9SJacob Faibussowitsch MatCheckProduct(C, 4); 21935f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 21949566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 2195*966bd95aSPierre Jolivet PetscCheck(A->rmap->rstart == B->rmap->rstart && A->rmap->rend == B->rmap->rend, comm, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, 2196*966bd95aSPierre Jolivet A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2197cb20be35SHong Zhang 21984222ddf1SHong Zhang /* create matrix product C */ 21999566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, cm, B->cmap->n, A->cmap->N, B->cmap->N)); 220047d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 22019566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSECUDA, "")); 220247d993e7Ssuyashtn #endif 220347d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 220447d993e7Ssuyashtn PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSEHIP, "")); 220547d993e7Ssuyashtn #endif 220648a46eb9SPierre Jolivet if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)A)->type_name)); 22079566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2208baa3c1c6SHong Zhang 22094222ddf1SHong Zhang /* create data structure for reuse C */ 22109566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22119566063dSJacob Faibussowitsch PetscCall(PetscNew(&atb)); 22124222ddf1SHong Zhang cM = C->rmap->N; 22139566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(cM * cN, &atb->sendbuf, size, &atb->recvcounts)); 22149566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 22156497c311SBarry Smith for (PetscMPIInt i = 0; i < size; i++) PetscCall(PetscMPIIntCast((ranges[i + 1] - ranges[i]) * cN, &atb->recvcounts[i])); 22166718818eSStefano Zampini C->product->data = atb; 22176718818eSStefano Zampini C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense; 22183ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2219cb20be35SHong Zhang } 2220cb20be35SHong Zhang 2221d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2222d71ae5a4SJacob Faibussowitsch { 2223cc48ffa7SToby Isaac MPI_Comm comm; 2224cc48ffa7SToby Isaac PetscMPIInt i, size; 2225cc48ffa7SToby Isaac PetscInt maxRows, bufsiz; 2226cc48ffa7SToby Isaac PetscMPIInt tag; 22274222ddf1SHong Zhang PetscInt alg; 2228cc48ffa7SToby Isaac Mat_MatTransMultDense *abt; 22294222ddf1SHong Zhang Mat_Product *product = C->product; 22304222ddf1SHong Zhang PetscBool flg; 2231cc48ffa7SToby Isaac 2232cc48ffa7SToby Isaac PetscFunctionBegin; 22336718818eSStefano Zampini MatCheckProduct(C, 4); 22345f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 22354222ddf1SHong Zhang /* check local size of A and B */ 22365f80ce2aSJacob Faibussowitsch PetscCheck(A->cmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")", A->cmap->n, B->cmap->n); 2237cc48ffa7SToby Isaac 22389566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "allgatherv", &flg)); 2239637a0070SStefano Zampini alg = flg ? 0 : 1; 2240cc48ffa7SToby Isaac 22414222ddf1SHong Zhang /* setup matrix product C */ 22429566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, A->rmap->n, B->rmap->n, A->rmap->N, B->rmap->N)); 22439566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATMPIDENSE)); 22449566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 22459566063dSJacob Faibussowitsch PetscCall(PetscObjectGetNewTag((PetscObject)C, &tag)); 22464222ddf1SHong Zhang 22474222ddf1SHong Zhang /* create data structure for reuse C */ 22489566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 22499566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22509566063dSJacob Faibussowitsch PetscCall(PetscNew(&abt)); 2251cc48ffa7SToby Isaac abt->tag = tag; 2252faa55883SToby Isaac abt->alg = alg; 2253faa55883SToby Isaac switch (alg) { 22544222ddf1SHong Zhang case 1: /* alg: "cyclic" */ 225557508eceSPierre Jolivet for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, B->rmap->range[i + 1] - B->rmap->range[i]); 2256cc48ffa7SToby Isaac bufsiz = A->cmap->N * maxRows; 2257f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(bufsiz, &abt->buf[0], bufsiz, &abt->buf[1])); 2258faa55883SToby Isaac break; 22594222ddf1SHong Zhang default: /* alg: "allgatherv" */ 2260f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &abt->buf[0], B->rmap->N * B->cmap->N, &abt->buf[1])); 2261f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(size, &abt->recvcounts, size + 1, &abt->recvdispls)); 22626497c311SBarry Smith for (i = 0; i <= size; i++) PetscCall(PetscMPIIntCast(B->rmap->range[i] * A->cmap->N, &abt->recvdispls[i])); 22636497c311SBarry Smith for (i = 0; i < size; i++) PetscCall(PetscMPIIntCast(abt->recvdispls[i + 1] - abt->recvdispls[i], &abt->recvcounts[i])); 2264faa55883SToby Isaac break; 2265faa55883SToby Isaac } 2266cc48ffa7SToby Isaac 22676718818eSStefano Zampini C->product->data = abt; 22686718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense; 22694222ddf1SHong Zhang C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense; 22703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2271cc48ffa7SToby Isaac } 2272cc48ffa7SToby Isaac 2273d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C) 2274d71ae5a4SJacob Faibussowitsch { 2275cc48ffa7SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 22766718818eSStefano Zampini Mat_MatTransMultDense *abt; 2277cc48ffa7SToby Isaac MPI_Comm comm; 22786497c311SBarry Smith PetscMPIInt rank, size, sendto, recvfrom, recvisfrom; 2279f4259b30SLisandro Dalcin PetscScalar *sendbuf, *recvbuf = NULL, *cv; 22806497c311SBarry Smith PetscInt i, cK = A->cmap->N, sendsiz, recvsiz, k, j, bn; 2281cc48ffa7SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2282637a0070SStefano Zampini const PetscScalar *av, *bv; 228323fff9afSBarry Smith PetscBLASInt cm, cn, ck, alda, blda = 0, clda; 2284cc48ffa7SToby Isaac MPI_Request reqs[2]; 2285cc48ffa7SToby Isaac const PetscInt *ranges; 2286cc48ffa7SToby Isaac 2287cc48ffa7SToby Isaac PetscFunctionBegin; 22886718818eSStefano Zampini MatCheckProduct(C, 3); 22895f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 22906718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 22919566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 22929566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 22939566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22949566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 22959566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 22969566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 22979566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 22989566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 22999566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &i)); 23009566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &blda)); 23019566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 23029566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 23039566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(B, &ranges)); 2304cc48ffa7SToby Isaac bn = B->rmap->n; 2305637a0070SStefano Zampini if (blda == bn) { 2306637a0070SStefano Zampini sendbuf = (PetscScalar *)bv; 2307cc48ffa7SToby Isaac } else { 2308cc48ffa7SToby Isaac sendbuf = abt->buf[0]; 2309cc48ffa7SToby Isaac for (k = 0, i = 0; i < cK; i++) { 2310ad540459SPierre Jolivet for (j = 0; j < bn; j++, k++) sendbuf[k] = bv[i * blda + j]; 2311cc48ffa7SToby Isaac } 2312cc48ffa7SToby Isaac } 2313cc48ffa7SToby Isaac if (size > 1) { 2314cc48ffa7SToby Isaac sendto = (rank + size - 1) % size; 2315cc48ffa7SToby Isaac recvfrom = (rank + size + 1) % size; 2316cc48ffa7SToby Isaac } else { 2317cc48ffa7SToby Isaac sendto = recvfrom = 0; 2318cc48ffa7SToby Isaac } 23199566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 23209566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 2321cc48ffa7SToby Isaac recvisfrom = rank; 2322cc48ffa7SToby Isaac for (i = 0; i < size; i++) { 2323cc48ffa7SToby Isaac /* we have finished receiving in sending, bufs can be read/modified */ 23246497c311SBarry Smith PetscMPIInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */ 2325cc48ffa7SToby Isaac PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom]; 2326cc48ffa7SToby Isaac 2327cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2328cc48ffa7SToby Isaac /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */ 2329cc48ffa7SToby Isaac sendsiz = cK * bn; 2330cc48ffa7SToby Isaac recvsiz = cK * nextbn; 2331cc48ffa7SToby Isaac recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1]; 23326497c311SBarry Smith PetscCallMPI(MPIU_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0])); 23336497c311SBarry Smith PetscCallMPI(MPIU_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1])); 2334cc48ffa7SToby Isaac } 2335cc48ffa7SToby Isaac 2336cc48ffa7SToby Isaac /* local aseq * sendbuf^T */ 23379566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn)); 2338792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "T", &cm, &cn, &ck, &_DOne, av, &alda, sendbuf, &cn, &_DZero, cv + clda * ranges[recvisfrom], &clda)); 2339cc48ffa7SToby Isaac 2340cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2341cc48ffa7SToby Isaac /* wait for the sends and receives to complete, swap sendbuf and recvbuf */ 23429566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE)); 2343cc48ffa7SToby Isaac } 2344cc48ffa7SToby Isaac bn = nextbn; 2345cc48ffa7SToby Isaac recvisfrom = nextrecvisfrom; 2346cc48ffa7SToby Isaac sendbuf = recvbuf; 2347cc48ffa7SToby Isaac } 23489566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 23499566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 23509566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 235167af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 23529566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 23539566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 23543ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2355cc48ffa7SToby Isaac } 2356cc48ffa7SToby Isaac 2357d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C) 2358d71ae5a4SJacob Faibussowitsch { 2359faa55883SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 23606718818eSStefano Zampini Mat_MatTransMultDense *abt; 2361faa55883SToby Isaac MPI_Comm comm; 23626497c311SBarry Smith PetscMPIInt size, ibn; 2363637a0070SStefano Zampini PetscScalar *cv, *sendbuf, *recvbuf; 2364637a0070SStefano Zampini const PetscScalar *av, *bv; 2365637a0070SStefano Zampini PetscInt blda, i, cK = A->cmap->N, k, j, bn; 2366faa55883SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2367637a0070SStefano Zampini PetscBLASInt cm, cn, ck, alda, clda; 2368faa55883SToby Isaac 2369faa55883SToby Isaac PetscFunctionBegin; 23706718818eSStefano Zampini MatCheckProduct(C, 3); 23715f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 23726718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 23739566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 23749566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 23759566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 23769566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 23779566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 23789566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 23799566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 23809566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &blda)); 23819566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 23829566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 2383faa55883SToby Isaac /* copy transpose of B into buf[0] */ 2384faa55883SToby Isaac bn = B->rmap->n; 2385faa55883SToby Isaac sendbuf = abt->buf[0]; 2386faa55883SToby Isaac recvbuf = abt->buf[1]; 2387faa55883SToby Isaac for (k = 0, j = 0; j < bn; j++) { 2388ad540459SPierre Jolivet for (i = 0; i < cK; i++, k++) sendbuf[k] = bv[i * blda + j]; 2389faa55883SToby Isaac } 23909566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 23916497c311SBarry Smith PetscCall(PetscMPIIntCast(bn * cK, &ibn)); 23926497c311SBarry Smith PetscCallMPI(MPI_Allgatherv(sendbuf, ibn, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm)); 23939566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 23949566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 23959566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->cmap->n, &cn)); 2396792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "N", &cm, &cn, &ck, &_DOne, av, &alda, recvbuf, &ck, &_DZero, cv, &clda)); 23979566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 23989566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 23999566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 240067af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 24019566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 24029566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 24033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2404faa55883SToby Isaac } 2405faa55883SToby Isaac 2406d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2407d71ae5a4SJacob Faibussowitsch { 24086718818eSStefano Zampini Mat_MatTransMultDense *abt; 2409faa55883SToby Isaac 2410faa55883SToby Isaac PetscFunctionBegin; 24116718818eSStefano Zampini MatCheckProduct(C, 3); 24125f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 24136718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 2414faa55883SToby Isaac switch (abt->alg) { 2415d71ae5a4SJacob Faibussowitsch case 1: 2416d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C)); 2417d71ae5a4SJacob Faibussowitsch break; 2418d71ae5a4SJacob Faibussowitsch default: 2419d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C)); 2420d71ae5a4SJacob Faibussowitsch break; 2421faa55883SToby Isaac } 24223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2423faa55883SToby Isaac } 2424faa55883SToby Isaac 242566976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data) 2426d71ae5a4SJacob Faibussowitsch { 24276718818eSStefano Zampini Mat_MatMultDense *ab = (Mat_MatMultDense *)data; 2428320f2790SHong Zhang 2429320f2790SHong Zhang PetscFunctionBegin; 24309566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ce)); 24319566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ae)); 24329566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Be)); 24339566063dSJacob Faibussowitsch PetscCall(PetscFree(ab)); 24343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2435320f2790SHong Zhang } 2436320f2790SHong Zhang 24375d8c7819SPierre Jolivet static PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2438d71ae5a4SJacob Faibussowitsch { 24396718818eSStefano Zampini Mat_MatMultDense *ab; 24405d8c7819SPierre Jolivet Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 2441d016bddeSToby Isaac Mat_MPIDense *b = (Mat_MPIDense *)B->data; 2442320f2790SHong Zhang 2443320f2790SHong Zhang PetscFunctionBegin; 24446718818eSStefano Zampini MatCheckProduct(C, 3); 24455f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Missing product data"); 24466718818eSStefano Zampini ab = (Mat_MatMultDense *)C->product->data; 24475d8c7819SPierre Jolivet if (ab->Ae && ab->Ce) { 24485d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 24499566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(A, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Ae)); 24509566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(B, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Be)); 24519566063dSJacob Faibussowitsch PetscCall(MatMatMultNumeric_Elemental(ab->Ae, ab->Be, ab->Ce)); 24529566063dSJacob Faibussowitsch PetscCall(MatConvert(ab->Ce, MATMPIDENSE, MAT_REUSE_MATRIX, &C)); 24535d8c7819SPierre Jolivet #else 24545d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 24555d8c7819SPierre Jolivet #endif 24565d8c7819SPierre Jolivet } else { 2457d016bddeSToby Isaac MPI_Comm comm; 24585d8c7819SPierre Jolivet const PetscScalar *read; 24595d8c7819SPierre Jolivet PetscScalar *write; 24605d8c7819SPierre Jolivet PetscInt lda; 2461d016bddeSToby Isaac const PetscInt *ranges; 2462d016bddeSToby Isaac PetscMPIInt size; 24635d8c7819SPierre Jolivet 2464d016bddeSToby Isaac if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); /* cannot be done during the symbolic phase because of possible calls to MatProductReplaceMats() */ 2465d016bddeSToby Isaac comm = PetscObjectComm((PetscObject)B); 2466d016bddeSToby Isaac PetscCallMPI(MPI_Comm_size(comm, &size)); 2467d016bddeSToby Isaac PetscCall(PetscLayoutGetRanges(B->rmap, &ranges)); 2468d016bddeSToby Isaac if (ranges[1] == ranges[size]) { 2469d016bddeSToby Isaac // optimize for the case where the B matrix is broadcast from rank 0 2470d016bddeSToby Isaac PetscInt b_lda, be_lda; 2471d016bddeSToby Isaac Mat b_local = b->A; 2472d016bddeSToby Isaac Mat b_alloc = NULL; 2473d016bddeSToby Isaac Mat be_local = ab->Be; 2474d016bddeSToby Isaac Mat be_alloc = NULL; 2475d016bddeSToby Isaac PetscMemType b_memtype, be_memtype; 2476d016bddeSToby Isaac const PetscScalar *b_array = NULL; 2477d016bddeSToby Isaac MPI_Datatype vector_type; 2478d016bddeSToby Isaac PetscScalar *be_array = NULL; 2479d016bddeSToby Isaac PetscMPIInt rank; 2480d016bddeSToby Isaac 2481d016bddeSToby Isaac PetscCallMPI(MPI_Comm_rank(comm, &rank)); 2482d016bddeSToby Isaac PetscCall(MatDenseGetLDA(be_local, &be_lda)); 2483d016bddeSToby Isaac if (be_lda != B->rmap->N) { 2484d016bddeSToby Isaac PetscCall(MatDuplicate(be_local, MAT_DO_NOT_COPY_VALUES, &be_alloc)); 2485d016bddeSToby Isaac be_local = be_alloc; 2486d016bddeSToby Isaac } 2487d016bddeSToby Isaac 2488d016bddeSToby Isaac if (rank == 0) { 2489d016bddeSToby Isaac PetscCall(MatDenseGetLDA(b_local, &b_lda)); 2490d016bddeSToby Isaac if (b_lda != B->rmap->N) { 2491d016bddeSToby Isaac PetscCall(MatDuplicate(b_local, MAT_DO_NOT_COPY_VALUES, &b_alloc)); 2492d016bddeSToby Isaac PetscCall(MatCopy(b_local, b_alloc, DIFFERENT_NONZERO_PATTERN)); 2493d016bddeSToby Isaac b_local = b_alloc; 2494d016bddeSToby Isaac } 2495d016bddeSToby Isaac } 2496b682a77bSToby Isaac vector_type = MPIU_SCALAR; 2497b682a77bSToby Isaac if (B->cmap->N > 1) { 2498b682a77bSToby Isaac PetscMPIInt mpi_N; 2499b682a77bSToby Isaac 2500b682a77bSToby Isaac PetscCall(PetscMPIIntCast(B->cmap->N, &mpi_N)); 2501b682a77bSToby Isaac PetscCallMPI(MPI_Type_contiguous(mpi_N, MPIU_SCALAR, &vector_type)); 2502d016bddeSToby Isaac PetscCallMPI(MPI_Type_commit(&vector_type)); 2503b682a77bSToby Isaac } 2504d016bddeSToby Isaac PetscCall(MatDenseGetArrayReadAndMemType(b_local, &b_array, &b_memtype)); 2505d016bddeSToby Isaac PetscCall(MatDenseGetArrayWriteAndMemType(be_local, &be_array, &be_memtype)); 2506d016bddeSToby Isaac PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, vector_type, b_memtype, b_array, be_memtype, be_array, MPI_REPLACE)); 2507d016bddeSToby Isaac PetscCall(PetscSFBcastEnd(mdn->Mvctx, vector_type, b_array, be_array, MPI_REPLACE)); 2508d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayWriteAndMemType(be_local, &be_array)); 2509d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayReadAndMemType(b_local, &b_array)); 2510d016bddeSToby Isaac if (be_local != ab->Be) PetscCall(MatCopy(be_local, ab->Be, DIFFERENT_NONZERO_PATTERN)); 2511b682a77bSToby Isaac if (B->cmap->N > 1) PetscCallMPI(MPI_Type_free(&vector_type)); 2512d016bddeSToby Isaac PetscCall(MatDestroy(&be_alloc)); 2513d016bddeSToby Isaac PetscCall(MatDestroy(&b_alloc)); 2514d016bddeSToby Isaac } else { 25155d8c7819SPierre Jolivet PetscCall(MatDenseGetLDA(B, &lda)); 25165d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayRead(B, &read)); 25175d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayWrite(ab->Be, &write)); 25185d8c7819SPierre Jolivet for (PetscInt i = 0; i < C->cmap->N; ++i) { 25195d8c7819SPierre Jolivet PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 25205d8c7819SPierre Jolivet PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 25215d8c7819SPierre Jolivet } 25225d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayWrite(ab->Be, &write)); 25235d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(B, &read)); 2524d016bddeSToby Isaac } 2525f4f49eeaSPierre Jolivet PetscCall(MatMatMultNumeric_SeqDense_SeqDense(((Mat_MPIDense *)A->data)->A, ab->Be, ((Mat_MPIDense *)C->data)->A)); 25265d8c7819SPierre Jolivet } 25273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2528320f2790SHong Zhang } 2529320f2790SHong Zhang 2530d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2531d71ae5a4SJacob Faibussowitsch { 25325d8c7819SPierre Jolivet Mat_Product *product = C->product; 25335d8c7819SPierre Jolivet PetscInt alg; 2534320f2790SHong Zhang Mat_MatMultDense *ab; 25355d8c7819SPierre Jolivet PetscBool flg; 2536320f2790SHong Zhang 2537320f2790SHong Zhang PetscFunctionBegin; 25386718818eSStefano Zampini MatCheckProduct(C, 4); 25395f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 25404222ddf1SHong Zhang /* check local size of A and B */ 25415d8c7819SPierre Jolivet PetscCheck(A->cmap->rstart == B->rmap->rstart && A->cmap->rend == B->rmap->rend, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ", %" PetscInt_FMT ")", 25425d8c7819SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2543320f2790SHong Zhang 25445d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "petsc", &flg)); 25455d8c7819SPierre Jolivet alg = flg ? 0 : 1; 25464222ddf1SHong Zhang 25474222ddf1SHong Zhang /* setup C */ 25485d8c7819SPierre Jolivet PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, A->rmap->N, B->cmap->N)); 25495d8c7819SPierre Jolivet PetscCall(MatSetType(C, MATMPIDENSE)); 25509566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2551320f2790SHong Zhang 2552320f2790SHong Zhang /* create data structure for reuse Cdense */ 25539566063dSJacob Faibussowitsch PetscCall(PetscNew(&ab)); 25545d8c7819SPierre Jolivet 25555d8c7819SPierre Jolivet switch (alg) { 25565d8c7819SPierre Jolivet case 1: /* alg: "elemental" */ 25575d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 25585d8c7819SPierre Jolivet /* create elemental matrices Ae and Be */ 25595d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &ab->Ae)); 25605d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Ae, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 25615d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Ae, MATELEMENTAL)); 25625d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Ae)); 25635d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Ae, MAT_ROW_ORIENTED, PETSC_FALSE)); 25645d8c7819SPierre Jolivet 25655d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &ab->Be)); 25665d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Be, PETSC_DECIDE, PETSC_DECIDE, B->rmap->N, B->cmap->N)); 25675d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Be, MATELEMENTAL)); 25685d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Be)); 25695d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Be, MAT_ROW_ORIENTED, PETSC_FALSE)); 25705d8c7819SPierre Jolivet 25715d8c7819SPierre Jolivet /* compute symbolic Ce = Ae*Be */ 25725d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)C), &ab->Ce)); 25735d8c7819SPierre Jolivet PetscCall(MatMatMultSymbolic_Elemental(ab->Ae, ab->Be, fill, ab->Ce)); 25745d8c7819SPierre Jolivet #else 25755d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 25765d8c7819SPierre Jolivet #endif 25775d8c7819SPierre Jolivet break; 25785d8c7819SPierre Jolivet default: /* alg: "petsc" */ 25795d8c7819SPierre Jolivet ab->Ae = NULL; 25805d8c7819SPierre Jolivet PetscCall(MatCreateSeqDense(PETSC_COMM_SELF, A->cmap->N, B->cmap->N, NULL, &ab->Be)); 25815d8c7819SPierre Jolivet ab->Ce = NULL; 25825d8c7819SPierre Jolivet break; 25835d8c7819SPierre Jolivet } 25846718818eSStefano Zampini 25856718818eSStefano Zampini C->product->data = ab; 25866718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense; 25874222ddf1SHong Zhang C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense; 25883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2589320f2790SHong Zhang } 25902ef1f0ffSBarry Smith 2591d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C) 2592d71ae5a4SJacob Faibussowitsch { 25935d8c7819SPierre Jolivet Mat_Product *product = C->product; 25945d8c7819SPierre Jolivet const char *algTypes[2] = {"petsc", "elemental"}; 25955d8c7819SPierre Jolivet PetscInt alg, nalg = PetscDefined(HAVE_ELEMENTAL) ? 2 : 1; 25965d8c7819SPierre Jolivet PetscBool flg = PETSC_FALSE; 25975d8c7819SPierre Jolivet 25984d86920dSPierre Jolivet PetscFunctionBegin; 25995d8c7819SPierre Jolivet /* Set default algorithm */ 2600f0b74427SPierre Jolivet alg = 0; /* default is PETSc */ 26015d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "default", &flg)); 2602835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26035d8c7819SPierre Jolivet 26045d8c7819SPierre Jolivet /* Get runtime option */ 26055d8c7819SPierre Jolivet PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_AB", "Mat"); 26065d8c7819SPierre Jolivet PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_AB", algTypes, nalg, algTypes[alg], &alg, &flg)); 26075d8c7819SPierre Jolivet PetscOptionsEnd(); 2608835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26095d8c7819SPierre Jolivet 26104222ddf1SHong Zhang C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense; 26114222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_AB; 26123ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2613320f2790SHong Zhang } 261486aefd0dSHong Zhang 2615d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C) 2616d71ae5a4SJacob Faibussowitsch { 26174222ddf1SHong Zhang Mat_Product *product = C->product; 26184222ddf1SHong Zhang Mat A = product->A, B = product->B; 26194222ddf1SHong Zhang 26204222ddf1SHong Zhang PetscFunctionBegin; 262107e90273SPierre Jolivet PetscCheck(A->rmap->rstart == B->rmap->rstart && A->rmap->rend == B->rmap->rend, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")", 262207e90273SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 26236718818eSStefano Zampini C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense; 26246718818eSStefano Zampini C->ops->productsymbolic = MatProductSymbolic_AtB; 26253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26264222ddf1SHong Zhang } 26274222ddf1SHong Zhang 2628d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C) 2629d71ae5a4SJacob Faibussowitsch { 26304222ddf1SHong Zhang Mat_Product *product = C->product; 26314222ddf1SHong Zhang const char *algTypes[2] = {"allgatherv", "cyclic"}; 26324222ddf1SHong Zhang PetscInt alg, nalg = 2; 26334222ddf1SHong Zhang PetscBool flg = PETSC_FALSE; 26344222ddf1SHong Zhang 26354222ddf1SHong Zhang PetscFunctionBegin; 26364222ddf1SHong Zhang /* Set default algorithm */ 26374222ddf1SHong Zhang alg = 0; /* default is allgatherv */ 26389566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "default", &flg)); 2639835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26404222ddf1SHong Zhang 26414222ddf1SHong Zhang /* Get runtime option */ 26424222ddf1SHong Zhang if (product->api_user) { 2643d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatMatTransposeMult", "Mat"); 26449566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via", "Algorithmic approach", "MatMatTransposeMult", algTypes, nalg, algTypes[alg], &alg, &flg)); 2645d0609cedSBarry Smith PetscOptionsEnd(); 26464222ddf1SHong Zhang } else { 2647d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_ABt", "Mat"); 26489566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_ABt", algTypes, nalg, algTypes[alg], &alg, &flg)); 2649d0609cedSBarry Smith PetscOptionsEnd(); 26504222ddf1SHong Zhang } 2651835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26524222ddf1SHong Zhang 26534222ddf1SHong Zhang C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense; 26544222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_ABt; 26553ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26564222ddf1SHong Zhang } 26574222ddf1SHong Zhang 26585d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C) 2659d71ae5a4SJacob Faibussowitsch { 26604222ddf1SHong Zhang Mat_Product *product = C->product; 26614222ddf1SHong Zhang 26624222ddf1SHong Zhang PetscFunctionBegin; 26634222ddf1SHong Zhang switch (product->type) { 2664d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AB: 2665d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AB(C)); 2666d71ae5a4SJacob Faibussowitsch break; 2667d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AtB: 2668d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AtB(C)); 2669d71ae5a4SJacob Faibussowitsch break; 2670d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABt: 2671d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_ABt(C)); 2672d71ae5a4SJacob Faibussowitsch break; 2673d71ae5a4SJacob Faibussowitsch default: 2674d71ae5a4SJacob Faibussowitsch break; 26754222ddf1SHong Zhang } 26763ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26774222ddf1SHong Zhang } 2678