1ed3cc1f0SBarry Smith /* 2ed3cc1f0SBarry Smith Basic functions for basic parallel dense matrices. 347d993e7Ssuyashtn Portions of this code are under: 447d993e7Ssuyashtn Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved. 5ed3cc1f0SBarry Smith */ 6ed3cc1f0SBarry Smith 7c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h> /*I "petscmat.h" I*/ 88949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h> 9baa3c1c6SHong Zhang #include <petscblaslapack.h> 104186a4bbSPierre Jolivet #include <petsc/private/vecimpl.h> 11d016bddeSToby Isaac #include <petscdevice.h> 12d016bddeSToby Isaac #include <petsc/private/deviceimpl.h> 138965ea79SLois Curfman McInnes 14ab92ecdeSBarry Smith /*@ 1511a5261eSBarry Smith MatDenseGetLocalMatrix - For a `MATMPIDENSE` or `MATSEQDENSE` matrix returns the sequential 16ab92ecdeSBarry Smith matrix that represents the operator. For sequential matrices it returns itself. 17ab92ecdeSBarry Smith 18ab92ecdeSBarry Smith Input Parameter: 192ef1f0ffSBarry Smith . A - the sequential or MPI `MATDENSE` matrix 20ab92ecdeSBarry Smith 21ab92ecdeSBarry Smith Output Parameter: 22ab92ecdeSBarry Smith . B - the inner matrix 23ab92ecdeSBarry Smith 248e6c10adSSatish Balay Level: intermediate 258e6c10adSSatish Balay 261cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MATMPIDENSE`, `MATSEQDENSE` 27ab92ecdeSBarry Smith @*/ 28d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetLocalMatrix(Mat A, Mat *B) 29d71ae5a4SJacob Faibussowitsch { 30ab92ecdeSBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 31ace3abfcSBarry Smith PetscBool flg; 32ab92ecdeSBarry Smith 33ab92ecdeSBarry Smith PetscFunctionBegin; 34d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 354f572ea9SToby Isaac PetscAssertPointer(B, 2); 369566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATMPIDENSE, &flg)); 372205254eSKarl Rupp if (flg) *B = mat->A; 38f140bc17SStefano Zampini else { 399566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATSEQDENSE, &flg)); 4028b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for matrix type %s", ((PetscObject)A)->type_name); 41f140bc17SStefano Zampini *B = A; 42f140bc17SStefano Zampini } 433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 44ab92ecdeSBarry Smith } 45ab92ecdeSBarry Smith 4666976f2fSJacob Faibussowitsch static PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s) 47d71ae5a4SJacob Faibussowitsch { 48a76f77c3SStefano Zampini Mat_MPIDense *Amat = (Mat_MPIDense *)A->data; 49a76f77c3SStefano Zampini Mat_MPIDense *Bmat = (Mat_MPIDense *)B->data; 50a76f77c3SStefano Zampini 51a76f77c3SStefano Zampini PetscFunctionBegin; 529566063dSJacob Faibussowitsch PetscCall(MatCopy(Amat->A, Bmat->A, s)); 533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 54a76f77c3SStefano Zampini } 55a76f77c3SStefano Zampini 56d71ae5a4SJacob Faibussowitsch PetscErrorCode MatShift_MPIDense(Mat A, PetscScalar alpha) 57d71ae5a4SJacob Faibussowitsch { 582f605a99SJose E. Roman Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 592f605a99SJose E. Roman PetscInt j, lda, rstart = A->rmap->rstart, rend = A->rmap->rend, rend2; 602f605a99SJose E. Roman PetscScalar *v; 612f605a99SJose E. Roman 622f605a99SJose E. Roman PetscFunctionBegin; 632f605a99SJose E. Roman PetscCall(MatDenseGetArray(mat->A, &v)); 642f605a99SJose E. Roman PetscCall(MatDenseGetLDA(mat->A, &lda)); 652f605a99SJose E. Roman rend2 = PetscMin(rend, A->cmap->N); 662f605a99SJose E. Roman if (rend2 > rstart) { 672f605a99SJose E. Roman for (j = rstart; j < rend2; j++) v[j - rstart + j * lda] += alpha; 682f605a99SJose E. Roman PetscCall(PetscLogFlops(rend2 - rstart)); 692f605a99SJose E. Roman } 702f605a99SJose E. Roman PetscCall(MatDenseRestoreArray(mat->A, &v)); 713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 722f605a99SJose E. Roman } 732f605a99SJose E. Roman 7466976f2fSJacob Faibussowitsch static PetscErrorCode MatGetRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 75d71ae5a4SJacob Faibussowitsch { 76ba8c8a56SBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 77d0f46423SBarry Smith PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 78ba8c8a56SBarry Smith 79ba8c8a56SBarry Smith PetscFunctionBegin; 80aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 81ba8c8a56SBarry Smith lrow = row - rstart; 829566063dSJacob Faibussowitsch PetscCall(MatGetRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 84ba8c8a56SBarry Smith } 85ba8c8a56SBarry Smith 8666976f2fSJacob Faibussowitsch static PetscErrorCode MatRestoreRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 87d71ae5a4SJacob Faibussowitsch { 88637a0070SStefano Zampini Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 89637a0070SStefano Zampini PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 90ba8c8a56SBarry Smith 91ba8c8a56SBarry Smith PetscFunctionBegin; 92aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 93637a0070SStefano Zampini lrow = row - rstart; 949566063dSJacob Faibussowitsch PetscCall(MatRestoreRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 96ba8c8a56SBarry Smith } 97ba8c8a56SBarry Smith 9866976f2fSJacob Faibussowitsch static PetscErrorCode MatGetDiagonalBlock_MPIDense(Mat A, Mat *a) 99d71ae5a4SJacob Faibussowitsch { 1000de54da6SSatish Balay Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 101d0f46423SBarry Smith PetscInt m = A->rmap->n, rstart = A->rmap->rstart; 10287828ca2SBarry Smith PetscScalar *array; 1030de54da6SSatish Balay MPI_Comm comm; 1044b6ae80fSStefano Zampini PetscBool flg; 10511bd1e4dSLisandro Dalcin Mat B; 1060de54da6SSatish Balay 1070de54da6SSatish Balay PetscFunctionBegin; 1089566063dSJacob Faibussowitsch PetscCall(MatHasCongruentLayouts(A, &flg)); 10928b400f6SJacob Faibussowitsch PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only square matrices supported."); 1109566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery((PetscObject)A, "DiagonalBlock", (PetscObject *)&B)); 111616b8fbbSStefano Zampini if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */ 112a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 1139566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSECUDA, &flg)); 11428b400f6SJacob Faibussowitsch PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSECUDA); 115a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 11647d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSEHIP, &flg)); 11747d993e7Ssuyashtn PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSEHIP); 11847d993e7Ssuyashtn #endif 119f4f49eeaSPierre Jolivet PetscCall(PetscObjectGetComm((PetscObject)mdn->A, &comm)); 1209566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &B)); 1219566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, m, m, m, m)); 1229566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)mdn->A)->type_name)); 1239566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, (const PetscScalar **)&array)); 1249566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(B, array + m * rstart)); 1259566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, (const PetscScalar **)&array)); 1269566063dSJacob Faibussowitsch PetscCall(PetscObjectCompose((PetscObject)A, "DiagonalBlock", (PetscObject)B)); 12711bd1e4dSLisandro Dalcin *a = B; 1289566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 1292205254eSKarl Rupp } else *a = B; 1303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1310de54da6SSatish Balay } 1320de54da6SSatish Balay 13366976f2fSJacob Faibussowitsch static PetscErrorCode MatSetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv) 134d71ae5a4SJacob Faibussowitsch { 13539b7565bSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)mat->data; 136d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 137ace3abfcSBarry Smith PetscBool roworiented = A->roworiented; 1388965ea79SLois Curfman McInnes 1393a40ed3dSBarry Smith PetscFunctionBegin; 1408965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 1415ef9f2a5SBarry Smith if (idxm[i] < 0) continue; 14208401ef6SPierre Jolivet PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 1438965ea79SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 1448965ea79SLois Curfman McInnes row = idxm[i] - rstart; 14539b7565bSBarry Smith if (roworiented) { 146de0a9f35SPierre Jolivet PetscCall(MatSetValues(A->A, 1, &row, n, idxn, PetscSafePointerPlusOffset(v, i * n), addv)); 1473a40ed3dSBarry Smith } else { 1488965ea79SLois Curfman McInnes for (j = 0; j < n; j++) { 1495ef9f2a5SBarry Smith if (idxn[j] < 0) continue; 15008401ef6SPierre Jolivet PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 151de0a9f35SPierre Jolivet PetscCall(MatSetValues(A->A, 1, &row, 1, &idxn[j], PetscSafePointerPlusOffset(v, i + j * m), addv)); 15239b7565bSBarry Smith } 1538965ea79SLois Curfman McInnes } 1542205254eSKarl Rupp } else if (!A->donotstash) { 1555080c13bSMatthew G Knepley mat->assembled = PETSC_FALSE; 15639b7565bSBarry Smith if (roworiented) { 157de0a9f35SPierre Jolivet PetscCall(MatStashValuesRow_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i * n), PETSC_FALSE)); 158d36fbae8SSatish Balay } else { 159de0a9f35SPierre Jolivet PetscCall(MatStashValuesCol_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i), m, PETSC_FALSE)); 16039b7565bSBarry Smith } 161b49de8d1SLois Curfman McInnes } 162b49de8d1SLois Curfman McInnes } 1633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 164b49de8d1SLois Curfman McInnes } 165b49de8d1SLois Curfman McInnes 16666976f2fSJacob Faibussowitsch static PetscErrorCode MatGetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], PetscScalar v[]) 167d71ae5a4SJacob Faibussowitsch { 168b49de8d1SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 169d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 170b49de8d1SLois Curfman McInnes 1713a40ed3dSBarry Smith PetscFunctionBegin; 172b49de8d1SLois Curfman McInnes for (i = 0; i < m; i++) { 17354c59aa7SJacob Faibussowitsch if (idxm[i] < 0) continue; /* negative row */ 17454c59aa7SJacob Faibussowitsch PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 175b49de8d1SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 176b49de8d1SLois Curfman McInnes row = idxm[i] - rstart; 177b49de8d1SLois Curfman McInnes for (j = 0; j < n; j++) { 17854c59aa7SJacob Faibussowitsch if (idxn[j] < 0) continue; /* negative column */ 17954c59aa7SJacob Faibussowitsch PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1809566063dSJacob Faibussowitsch PetscCall(MatGetValues(mdn->A, 1, &row, 1, &idxn[j], v + i * n + j)); 181b49de8d1SLois Curfman McInnes } 182e7e72b3dSBarry Smith } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Only local values currently supported"); 1838965ea79SLois Curfman McInnes } 1843ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1858965ea79SLois Curfman McInnes } 1868965ea79SLois Curfman McInnes 187d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A, PetscInt *lda) 188d71ae5a4SJacob Faibussowitsch { 18949a6ff4bSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 19049a6ff4bSBarry Smith 19149a6ff4bSBarry Smith PetscFunctionBegin; 1929566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, lda)); 1933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19449a6ff4bSBarry Smith } 19549a6ff4bSBarry Smith 196d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A, PetscInt lda) 197d71ae5a4SJacob Faibussowitsch { 198ad16ce7aSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 19947d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 200ad16ce7aSStefano Zampini 201ad16ce7aSStefano Zampini PetscFunctionBegin; 20217359960SJose E. Roman if (!a->A) { 20328b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2049566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 2059566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 2069566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 2079566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N)); 208a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 20947d993e7Ssuyashtn PetscBool iscuda; 2109566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda)); 21147d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 212a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 21347d993e7Ssuyashtn PetscBool iship; 21447d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSEHIP, &iship)); 21547d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 21647d993e7Ssuyashtn #endif 21747d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 21817359960SJose E. Roman } 2199566063dSJacob Faibussowitsch PetscCall(MatDenseSetLDA(a->A, lda)); 2203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 221ad16ce7aSStefano Zampini } 222ad16ce7aSStefano Zampini 223d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArray_MPIDense(Mat A, PetscScalar **array) 224d71ae5a4SJacob Faibussowitsch { 225ff14e315SSatish Balay Mat_MPIDense *a = (Mat_MPIDense *)A->data; 226ff14e315SSatish Balay 2273a40ed3dSBarry Smith PetscFunctionBegin; 22828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2299566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, array)); 2303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 231ff14e315SSatish Balay } 232ff14e315SSatish Balay 233f1e99121SPierre Jolivet static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A, PetscScalar **array) 234d71ae5a4SJacob Faibussowitsch { 2358572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2368572280aSBarry Smith 2378572280aSBarry Smith PetscFunctionBegin; 23828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 239f1e99121SPierre Jolivet PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)array)); 2403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2418572280aSBarry Smith } 2428572280aSBarry Smith 243d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A, PetscScalar **array) 244d71ae5a4SJacob Faibussowitsch { 2456947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2466947451fSStefano Zampini 2476947451fSStefano Zampini PetscFunctionBegin; 24828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2499566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, array)); 2503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2516947451fSStefano Zampini } 2526947451fSStefano Zampini 253d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A, const PetscScalar *array) 254d71ae5a4SJacob Faibussowitsch { 255d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 256d3042a70SBarry Smith 257d3042a70SBarry Smith PetscFunctionBegin; 25828b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 25928b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2609566063dSJacob Faibussowitsch PetscCall(MatDensePlaceArray(a->A, array)); 2613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 262d3042a70SBarry Smith } 263d3042a70SBarry Smith 264d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseResetArray_MPIDense(Mat A) 265d71ae5a4SJacob Faibussowitsch { 266d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 267d3042a70SBarry Smith 268d3042a70SBarry Smith PetscFunctionBegin; 26928b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 27028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2719566063dSJacob Faibussowitsch PetscCall(MatDenseResetArray(a->A)); 2723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 273d3042a70SBarry Smith } 274d3042a70SBarry Smith 275d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A, const PetscScalar *array) 276d71ae5a4SJacob Faibussowitsch { 277d5ea218eSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 278d5ea218eSStefano Zampini 279d5ea218eSStefano Zampini PetscFunctionBegin; 28028b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 28128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2829566063dSJacob Faibussowitsch PetscCall(MatDenseReplaceArray(a->A, array)); 2833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 284d5ea218eSStefano Zampini } 285d5ea218eSStefano Zampini 286d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A, IS isrow, IS iscol, MatReuse scall, Mat *B) 287d71ae5a4SJacob Faibussowitsch { 288ca3fa75bSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data, *newmatd; 289637a0070SStefano Zampini PetscInt lda, i, j, rstart, rend, nrows, ncols, Ncols, nlrows, nlcols; 2905d0c19d7SBarry Smith const PetscInt *irow, *icol; 291637a0070SStefano Zampini const PetscScalar *v; 292637a0070SStefano Zampini PetscScalar *bv; 293ca3fa75bSLois Curfman McInnes Mat newmat; 2944aa3045dSJed Brown IS iscol_local; 29542a884f0SBarry Smith MPI_Comm comm_is, comm_mat; 296ca3fa75bSLois Curfman McInnes 297ca3fa75bSLois Curfman McInnes PetscFunctionBegin; 2989566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm_mat)); 2999566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)iscol, &comm_is)); 30008401ef6SPierre Jolivet PetscCheck(comm_mat == comm_is, PETSC_COMM_SELF, PETSC_ERR_ARG_NOTSAMECOMM, "IS communicator must match matrix communicator"); 30142a884f0SBarry Smith 3029566063dSJacob Faibussowitsch PetscCall(ISAllGather(iscol, &iscol_local)); 3039566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &irow)); 3049566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol_local, &icol)); 3059566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(isrow, &nrows)); 3069566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(iscol, &ncols)); 3079566063dSJacob Faibussowitsch PetscCall(ISGetSize(iscol, &Ncols)); /* global number of columns, size of iscol_local */ 308ca3fa75bSLois Curfman McInnes 309ca3fa75bSLois Curfman McInnes /* No parallel redistribution currently supported! Should really check each index set 310da81f932SPierre Jolivet to confirm that it is OK. ... Currently supports only submatrix same partitioning as 3117eba5e9cSLois Curfman McInnes original matrix! */ 312ca3fa75bSLois Curfman McInnes 3139566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &nlrows, &nlcols)); 3149566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRange(A, &rstart, &rend)); 315ca3fa75bSLois Curfman McInnes 316ca3fa75bSLois Curfman McInnes /* Check submatrix call */ 317ca3fa75bSLois Curfman McInnes if (scall == MAT_REUSE_MATRIX) { 318e32f2f54SBarry Smith /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */ 3197eba5e9cSLois Curfman McInnes /* Really need to test rows and column sizes! */ 320ca3fa75bSLois Curfman McInnes newmat = *B; 321ca3fa75bSLois Curfman McInnes } else { 322ca3fa75bSLois Curfman McInnes /* Create and fill new matrix */ 3239566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &newmat)); 3249566063dSJacob Faibussowitsch PetscCall(MatSetSizes(newmat, nrows, ncols, PETSC_DECIDE, Ncols)); 3259566063dSJacob Faibussowitsch PetscCall(MatSetType(newmat, ((PetscObject)A)->type_name)); 3269566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(newmat, NULL)); 327ca3fa75bSLois Curfman McInnes } 328ca3fa75bSLois Curfman McInnes 329ca3fa75bSLois Curfman McInnes /* Now extract the data pointers and do the copy, column at a time */ 330ca3fa75bSLois Curfman McInnes newmatd = (Mat_MPIDense *)newmat->data; 3319566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(newmatd->A, &bv)); 3329566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mat->A, &v)); 3339566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mat->A, &lda)); 3344aa3045dSJed Brown for (i = 0; i < Ncols; i++) { 335637a0070SStefano Zampini const PetscScalar *av = v + lda * icol[i]; 336ad540459SPierre Jolivet for (j = 0; j < nrows; j++) *bv++ = av[irow[j] - rstart]; 337ca3fa75bSLois Curfman McInnes } 3389566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mat->A, &v)); 3399566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(newmatd->A, &bv)); 340ca3fa75bSLois Curfman McInnes 341ca3fa75bSLois Curfman McInnes /* Assemble the matrices so that the correct flags are set */ 3429566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(newmat, MAT_FINAL_ASSEMBLY)); 3439566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(newmat, MAT_FINAL_ASSEMBLY)); 344ca3fa75bSLois Curfman McInnes 345ca3fa75bSLois Curfman McInnes /* Free work space */ 3469566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &irow)); 3479566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol_local, &icol)); 3489566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iscol_local)); 349ca3fa75bSLois Curfman McInnes *B = newmat; 3503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 351ca3fa75bSLois Curfman McInnes } 352ca3fa75bSLois Curfman McInnes 35366976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A, PetscScalar **array) 354d71ae5a4SJacob Faibussowitsch { 35573a71a0fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 35673a71a0fSBarry Smith 3573a40ed3dSBarry Smith PetscFunctionBegin; 3589566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, array)); 3593ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 360ff14e315SSatish Balay } 361ff14e315SSatish Balay 362f1e99121SPierre Jolivet static PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A, PetscScalar **array) 363d71ae5a4SJacob Faibussowitsch { 3648572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3658572280aSBarry Smith 3668572280aSBarry Smith PetscFunctionBegin; 367f1e99121SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)array)); 3683ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3698572280aSBarry Smith } 3708572280aSBarry Smith 37166976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A, PetscScalar **array) 372d71ae5a4SJacob Faibussowitsch { 3736947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3746947451fSStefano Zampini 3756947451fSStefano Zampini PetscFunctionBegin; 3769566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, array)); 3773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3786947451fSStefano Zampini } 3796947451fSStefano Zampini 38066976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat, MatAssemblyType mode) 381d71ae5a4SJacob Faibussowitsch { 38239ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 38313f74950SBarry Smith PetscInt nstash, reallocs; 3848965ea79SLois Curfman McInnes 3853a40ed3dSBarry Smith PetscFunctionBegin; 3863ba16761SJacob Faibussowitsch if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(PETSC_SUCCESS); 3878965ea79SLois Curfman McInnes 3889566063dSJacob Faibussowitsch PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); 3899566063dSJacob Faibussowitsch PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); 3909566063dSJacob Faibussowitsch PetscCall(PetscInfo(mdn->A, "Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n", nstash, reallocs)); 3913ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3928965ea79SLois Curfman McInnes } 3938965ea79SLois Curfman McInnes 39466976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat, MatAssemblyType mode) 395d71ae5a4SJacob Faibussowitsch { 39639ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 39713f74950SBarry Smith PetscInt i, *row, *col, flg, j, rstart, ncols; 39813f74950SBarry Smith PetscMPIInt n; 39987828ca2SBarry Smith PetscScalar *val; 4008965ea79SLois Curfman McInnes 4013a40ed3dSBarry Smith PetscFunctionBegin; 402910cf402Sprj- if (!mdn->donotstash && !mat->nooffprocentries) { 4038965ea79SLois Curfman McInnes /* wait on receives */ 4047ef1d9bdSSatish Balay while (1) { 4059566063dSJacob Faibussowitsch PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); 4067ef1d9bdSSatish Balay if (!flg) break; 4078965ea79SLois Curfman McInnes 4087ef1d9bdSSatish Balay for (i = 0; i < n;) { 4097ef1d9bdSSatish Balay /* Now identify the consecutive vals belonging to the same row */ 4102205254eSKarl Rupp for (j = i, rstart = row[j]; j < n; j++) { 4112205254eSKarl Rupp if (row[j] != rstart) break; 4122205254eSKarl Rupp } 4137ef1d9bdSSatish Balay if (j < n) ncols = j - i; 4147ef1d9bdSSatish Balay else ncols = n - i; 4157ef1d9bdSSatish Balay /* Now assemble all these values with a single function call */ 4169566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(mat, 1, row + i, ncols, col + i, val + i, mat->insertmode)); 4177ef1d9bdSSatish Balay i = j; 4188965ea79SLois Curfman McInnes } 4197ef1d9bdSSatish Balay } 4209566063dSJacob Faibussowitsch PetscCall(MatStashScatterEnd_Private(&mat->stash)); 421910cf402Sprj- } 4228965ea79SLois Curfman McInnes 4239566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mdn->A, mode)); 4249566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mdn->A, mode)); 4253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4268965ea79SLois Curfman McInnes } 4278965ea79SLois Curfman McInnes 42866976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroEntries_MPIDense(Mat A) 429d71ae5a4SJacob Faibussowitsch { 43039ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 4313a40ed3dSBarry Smith 4323a40ed3dSBarry Smith PetscFunctionBegin; 4339566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(l->A)); 4343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4358965ea79SLois Curfman McInnes } 4368965ea79SLois Curfman McInnes 43766976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroRows_MPIDense(Mat A, PetscInt n, const PetscInt rows[], PetscScalar diag, Vec x, Vec b) 438d71ae5a4SJacob Faibussowitsch { 43939ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 440637a0070SStefano Zampini PetscInt i, len, *lrows; 441637a0070SStefano Zampini 442637a0070SStefano Zampini PetscFunctionBegin; 443637a0070SStefano Zampini /* get locally owned rows */ 4449566063dSJacob Faibussowitsch PetscCall(PetscLayoutMapLocal(A->rmap, n, rows, &len, &lrows, NULL)); 445dd8e379bSPierre Jolivet /* fix right-hand side if needed */ 446637a0070SStefano Zampini if (x && b) { 44797b48c8fSBarry Smith const PetscScalar *xx; 44897b48c8fSBarry Smith PetscScalar *bb; 4498965ea79SLois Curfman McInnes 4509566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(x, &xx)); 4519566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(b, &bb)); 452637a0070SStefano Zampini for (i = 0; i < len; ++i) bb[lrows[i]] = diag * xx[lrows[i]]; 4539566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(x, &xx)); 4549566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(b, &bb)); 45597b48c8fSBarry Smith } 4569566063dSJacob Faibussowitsch PetscCall(MatZeroRows(l->A, len, lrows, 0.0, NULL, NULL)); 457e2eb51b1SBarry Smith if (diag != 0.0) { 458637a0070SStefano Zampini Vec d; 459b9679d65SBarry Smith 4609566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A, NULL, &d)); 4619566063dSJacob Faibussowitsch PetscCall(VecSet(d, diag)); 4629566063dSJacob Faibussowitsch PetscCall(MatDiagonalSet(A, d, INSERT_VALUES)); 4639566063dSJacob Faibussowitsch PetscCall(VecDestroy(&d)); 464b9679d65SBarry Smith } 4659566063dSJacob Faibussowitsch PetscCall(PetscFree(lrows)); 4663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4678965ea79SLois Curfman McInnes } 4688965ea79SLois Curfman McInnes 4690be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat, Vec, Vec); 4700be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat, Vec, Vec, Vec); 4710be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat, Vec, Vec); 4720be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat, Vec, Vec, Vec); 4730be0d8bdSHansol Suh 474d016bddeSToby Isaac static PetscErrorCode MatMultColumnRange_MPIDense(Mat mat, Vec xx, Vec yy, PetscInt c_start, PetscInt c_end) 475d016bddeSToby Isaac { 476d016bddeSToby Isaac Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 477d016bddeSToby Isaac const PetscScalar *ax; 478d016bddeSToby Isaac PetscScalar *ay; 479d016bddeSToby Isaac PetscMemType axmtype, aymtype; 480d016bddeSToby Isaac 481d016bddeSToby Isaac PetscFunctionBegin; 482d016bddeSToby Isaac if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 483d016bddeSToby Isaac PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 484d016bddeSToby Isaac PetscCall(VecGetArrayWriteAndMemType(mdn->lvec, &ay, &aymtype)); 485d016bddeSToby Isaac PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 486d016bddeSToby Isaac PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 487d016bddeSToby Isaac PetscCall(VecRestoreArrayWriteAndMemType(mdn->lvec, &ay)); 488d016bddeSToby Isaac PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 489d016bddeSToby Isaac PetscUseMethod(mdn->A, "MatMultColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (mdn->A, mdn->lvec, yy, c_start, c_end)); 490d016bddeSToby Isaac PetscFunctionReturn(PETSC_SUCCESS); 491d016bddeSToby Isaac } 492d016bddeSToby Isaac 49366976f2fSJacob Faibussowitsch static PetscErrorCode MatMult_MPIDense(Mat mat, Vec xx, Vec yy) 494d71ae5a4SJacob Faibussowitsch { 49539ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 496637a0070SStefano Zampini const PetscScalar *ax; 497637a0070SStefano Zampini PetscScalar *ay; 498d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 499c456f294SBarry Smith 5003a40ed3dSBarry Smith PetscFunctionBegin; 5016f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5029566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 503d016bddeSToby Isaac PetscCall(VecGetArrayWriteAndMemType(mdn->lvec, &ay, &aymtype)); 5049566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5059566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 506d016bddeSToby Isaac PetscCall(VecRestoreArrayWriteAndMemType(mdn->lvec, &ay)); 5079566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5089566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->mult)(mdn->A, mdn->lvec, yy)); 5093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5108965ea79SLois Curfman McInnes } 5118965ea79SLois Curfman McInnes 5120be0d8bdSHansol Suh static PetscErrorCode MatMultAddColumnRange_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz, PetscInt c_start, PetscInt c_end) 5130be0d8bdSHansol Suh { 5140be0d8bdSHansol Suh Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 5150be0d8bdSHansol Suh const PetscScalar *ax; 5160be0d8bdSHansol Suh PetscScalar *ay; 5170be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 5180be0d8bdSHansol Suh 5190be0d8bdSHansol Suh PetscFunctionBegin; 5200be0d8bdSHansol Suh if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5210be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 5220be0d8bdSHansol Suh PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 5230be0d8bdSHansol Suh PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5240be0d8bdSHansol Suh PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 5250be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 5260be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5270be0d8bdSHansol Suh PetscUseMethod(mdn->A, "MatMultAddColumnRange_C", (Mat, Vec, Vec, Vec, PetscInt, PetscInt), (mdn->A, mdn->lvec, yy, zz, c_start, c_end)); 5280be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 5290be0d8bdSHansol Suh } 5300be0d8bdSHansol Suh 53166976f2fSJacob Faibussowitsch static PetscErrorCode MatMultAdd_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz) 532d71ae5a4SJacob Faibussowitsch { 53339ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 534637a0070SStefano Zampini const PetscScalar *ax; 535637a0070SStefano Zampini PetscScalar *ay; 536d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 537c456f294SBarry Smith 5383a40ed3dSBarry Smith PetscFunctionBegin; 5396f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5409566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 5419566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 5429566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5439566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 5449566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 5459566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5469566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->multadd)(mdn->A, mdn->lvec, yy, zz)); 5473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5488965ea79SLois Curfman McInnes } 5498965ea79SLois Curfman McInnes 5500be0d8bdSHansol Suh static PetscErrorCode MatMultHermitianTransposeColumnRange_MPIDense(Mat A, Vec xx, Vec yy, PetscInt c_start, PetscInt c_end) 5510be0d8bdSHansol Suh { 5520be0d8bdSHansol Suh Mat_MPIDense *a = (Mat_MPIDense *)A->data; 5530be0d8bdSHansol Suh const PetscScalar *ax; 5540be0d8bdSHansol Suh PetscScalar *ay; 5550be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 556d016bddeSToby Isaac PetscInt r_start, r_end; 557d016bddeSToby Isaac PetscInt c_start_local, c_end_local; 5580be0d8bdSHansol Suh 5590be0d8bdSHansol Suh PetscFunctionBegin; 5600be0d8bdSHansol Suh if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 561d016bddeSToby Isaac PetscCall(VecZeroEntries(a->lvec)); 562d016bddeSToby Isaac PetscCall(VecGetOwnershipRange(yy, &r_start, &r_end)); 563d016bddeSToby Isaac c_start_local = PetscMax(c_start, r_start); 564d016bddeSToby Isaac c_end_local = PetscMin(c_end, r_end); 565d016bddeSToby Isaac PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 566d016bddeSToby Isaac if (c_end_local > c_start_local) { 567d016bddeSToby Isaac if (PetscMemTypeHost(aymtype)) { 568d016bddeSToby Isaac PetscCall(PetscArrayzero(&ay[c_start_local], (size_t)(c_end_local - c_start_local))); 569d016bddeSToby Isaac } else { 570d016bddeSToby Isaac PetscCall(PetscDeviceRegisterMemory(ay, aymtype, sizeof(*ay) * ((size_t)(r_end - r_start)))); 571d016bddeSToby Isaac PetscCall(PetscDeviceArrayZero(NULL, &ay[c_start_local], (size_t)(c_end_local - c_start_local))); 572d016bddeSToby Isaac } 573d016bddeSToby Isaac } 5740be0d8bdSHansol Suh PetscUseMethod(a->A, "MatMultHermitianTransposeColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (a->A, xx, a->lvec, c_start, c_end)); 5750be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5760be0d8bdSHansol Suh PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5770be0d8bdSHansol Suh PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5780be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5790be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 5800be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 5810be0d8bdSHansol Suh } 5820be0d8bdSHansol Suh 583459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeKernel_MPIDense(Mat A, Vec xx, Vec yy, PetscBool herm) 584d71ae5a4SJacob Faibussowitsch { 585096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 586637a0070SStefano Zampini const PetscScalar *ax; 587637a0070SStefano Zampini PetscScalar *ay; 588d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 5894d86920dSPierre Jolivet 5903a40ed3dSBarry Smith PetscFunctionBegin; 5916f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 5929566063dSJacob Faibussowitsch PetscCall(VecSet(yy, 0.0)); 593459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 594459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 5959566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5969566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 5979566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5989566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5999566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 6009566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 6013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 602096963f5SLois Curfman McInnes } 603096963f5SLois Curfman McInnes 6040be0d8bdSHansol Suh static PetscErrorCode MatMultHermitianTransposeAddColumnRange_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscInt c_start, PetscInt c_end) 6050be0d8bdSHansol Suh { 6060be0d8bdSHansol Suh Mat_MPIDense *a = (Mat_MPIDense *)A->data; 6070be0d8bdSHansol Suh const PetscScalar *ax; 6080be0d8bdSHansol Suh PetscScalar *ay; 6090be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 6100be0d8bdSHansol Suh 6110be0d8bdSHansol Suh PetscFunctionBegin; 6120be0d8bdSHansol Suh if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 6130be0d8bdSHansol Suh PetscCall(VecCopy(yy, zz)); 614d016bddeSToby Isaac PetscCall(VecZeroEntries(a->lvec)); 6150be0d8bdSHansol Suh PetscUseMethod(a->A, "MatMultHermitianTransposeColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (a->A, xx, a->lvec, c_start, c_end)); 6160be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 6170be0d8bdSHansol Suh PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 6180be0d8bdSHansol Suh PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 6190be0d8bdSHansol Suh PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 6200be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 6210be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 6220be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 6230be0d8bdSHansol Suh } 6240be0d8bdSHansol Suh 625459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAddKernel_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscBool herm) 626d71ae5a4SJacob Faibussowitsch { 627096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 628637a0070SStefano Zampini const PetscScalar *ax; 629637a0070SStefano Zampini PetscScalar *ay; 630d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 631096963f5SLois Curfman McInnes 6323a40ed3dSBarry Smith PetscFunctionBegin; 6336f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 6349566063dSJacob Faibussowitsch PetscCall(VecCopy(yy, zz)); 635459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 636459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 6379566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 6389566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 6399566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 6409566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 6419566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 6429566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 6433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 644096963f5SLois Curfman McInnes } 645096963f5SLois Curfman McInnes 646459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTranspose_MPIDense(Mat A, Vec xx, Vec yy) 647459e8d23SBlanca Mellado Pinto { 648459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 649459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_FALSE)); 650459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 651459e8d23SBlanca Mellado Pinto } 652459e8d23SBlanca Mellado Pinto 653459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 654459e8d23SBlanca Mellado Pinto { 655459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 656459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_FALSE)); 657459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 658459e8d23SBlanca Mellado Pinto } 659459e8d23SBlanca Mellado Pinto 660459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTranspose_MPIDense(Mat A, Vec xx, Vec yy) 661459e8d23SBlanca Mellado Pinto { 662459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 663459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_TRUE)); 664459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 665459e8d23SBlanca Mellado Pinto } 666459e8d23SBlanca Mellado Pinto 667459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 668459e8d23SBlanca Mellado Pinto { 669459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 670459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_TRUE)); 671459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 672459e8d23SBlanca Mellado Pinto } 673459e8d23SBlanca Mellado Pinto 674d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetDiagonal_MPIDense(Mat A, Vec v) 675d71ae5a4SJacob Faibussowitsch { 67639ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 67779560b15SJacob Faibussowitsch PetscInt lda, len, i, nl, ng, m = A->rmap->n, radd; 67879560b15SJacob Faibussowitsch PetscScalar *x; 679637a0070SStefano Zampini const PetscScalar *av; 680ed3cc1f0SBarry Smith 6813a40ed3dSBarry Smith PetscFunctionBegin; 6829566063dSJacob Faibussowitsch PetscCall(VecGetArray(v, &x)); 68379560b15SJacob Faibussowitsch PetscCall(VecGetSize(v, &ng)); 68479560b15SJacob Faibussowitsch PetscCheck(ng == A->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming mat and vec"); 68579560b15SJacob Faibussowitsch PetscCall(VecGetLocalSize(v, &nl)); 686d0f46423SBarry Smith len = PetscMin(a->A->rmap->n, a->A->cmap->n); 687d0f46423SBarry Smith radd = A->rmap->rstart * m; 6889566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 6899566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 690ad540459SPierre Jolivet for (i = 0; i < len; i++) x[i] = av[radd + i * lda + i]; 6919566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 6920be0d8bdSHansol Suh if (nl - i > 0) PetscCall(PetscArrayzero(x + i, nl - i)); 6939566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(v, &x)); 6943ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6958965ea79SLois Curfman McInnes } 6968965ea79SLois Curfman McInnes 69766976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MPIDense(Mat mat) 698d71ae5a4SJacob Faibussowitsch { 6993501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 700ed3cc1f0SBarry Smith 7013a40ed3dSBarry Smith PetscFunctionBegin; 7023ba16761SJacob Faibussowitsch PetscCall(PetscLogObjectState((PetscObject)mat, "Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT, mat->rmap->N, mat->cmap->N)); 7039566063dSJacob Faibussowitsch PetscCall(MatStashDestroy_Private(&mat->stash)); 70428b400f6SJacob Faibussowitsch PetscCheck(!mdn->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 70528b400f6SJacob Faibussowitsch PetscCheck(!mdn->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 7069566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->A)); 7079566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->lvec)); 7089566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&mdn->Mvctx)); 7099566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->cvec)); 7109566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->cmat)); 71101b82886SBarry Smith 7129566063dSJacob Faibussowitsch PetscCall(PetscFree(mat->data)); 7139566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, NULL)); 7148baccfbdSHong Zhang 7159566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", NULL)); 7169566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", NULL)); 7179566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", NULL)); 7189566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", NULL)); 7199566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", NULL)); 7209566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", NULL)); 7219566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", NULL)); 7229566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", NULL)); 7239566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", NULL)); 7249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", NULL)); 7259566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", NULL)); 7269566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", NULL)); 7279566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", NULL)); 7288baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 7299566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", NULL)); 7308baccfbdSHong Zhang #endif 731d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 7329566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", NULL)); 733d24d4204SJose E. Roman #endif 7349566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", NULL)); 7359566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", NULL)); 7369566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", NULL)); 7376718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 7389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", NULL)); 7399566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", NULL)); 7402e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", NULL)); 7412e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensecuda_mpidense_C", NULL)); 7422e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL)); 7432e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL)); 7442e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL)); 7452e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL)); 7462e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArray_C", NULL)); 7472e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayRead_C", NULL)); 7482e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayWrite_C", NULL)); 7492e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArray_C", NULL)); 7502e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayRead_C", NULL)); 7512e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayWrite_C", NULL)); 7522e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAPlaceArray_C", NULL)); 7532e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAResetArray_C", NULL)); 7542e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAReplaceArray_C", NULL)); 7553d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDASetPreallocation_C", NULL)); 7566718818eSStefano Zampini #endif 75747d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 75847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", NULL)); 75947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", NULL)); 76047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", NULL)); 76147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensehip_mpidense_C", NULL)); 76247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensehip_C", NULL)); 76347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidensehip_C", NULL)); 76447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaij_C", NULL)); 76547d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaijhipsparse_C", NULL)); 76647d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArray_C", NULL)); 76747d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayRead_C", NULL)); 76847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayWrite_C", NULL)); 76947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArray_C", NULL)); 77047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayRead_C", NULL)); 77147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayWrite_C", NULL)); 77247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPPlaceArray_C", NULL)); 77347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPResetArray_C", NULL)); 77447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPReplaceArray_C", NULL)); 7753d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPSetPreallocation_C", NULL)); 77647d993e7Ssuyashtn #endif 7779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", NULL)); 7789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", NULL)); 7799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", NULL)); 7809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", NULL)); 7819566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", NULL)); 7829566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", NULL)); 7839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", NULL)); 7849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", NULL)); 7859566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", NULL)); 7869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", NULL)); 787d016bddeSToby Isaac PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultColumnRange_C", NULL)); 7880be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultAddColumnRange_C", NULL)); 7890be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeColumnRange_C", NULL)); 7900be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeAddColumnRange_C", NULL)); 791f8103e6bSStefano Zampini 792f8103e6bSStefano Zampini PetscCall(PetscObjectCompose((PetscObject)mat, "DiagonalBlock", NULL)); 7933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7948965ea79SLois Curfman McInnes } 79539ddd567SLois Curfman McInnes 7969804daf3SBarry Smith #include <petscdraw.h> 797d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat, PetscViewer viewer) 798d71ae5a4SJacob Faibussowitsch { 79939ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 800616b8fbbSStefano Zampini PetscMPIInt rank; 80119fd82e9SBarry Smith PetscViewerType vtype; 802*9f196a02SMartin Diehl PetscBool isascii, isdraw; 803b0a32e0cSBarry Smith PetscViewer sviewer; 804f3ef73ceSBarry Smith PetscViewerFormat format; 8058965ea79SLois Curfman McInnes 8063a40ed3dSBarry Smith PetscFunctionBegin; 8079566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat), &rank)); 808*9f196a02SMartin Diehl PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isascii)); 8099566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 810*9f196a02SMartin Diehl if (isascii) { 8119566063dSJacob Faibussowitsch PetscCall(PetscViewerGetType(viewer, &vtype)); 8129566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 813456192e2SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 8144e220ebcSLois Curfman McInnes MatInfo info; 8159566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mat, MAT_LOCAL, &info)); 8169566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 8179371c9d4SSatish Balay PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, " [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n", rank, mat->rmap->n, (PetscInt)info.nz_used, (PetscInt)info.nz_allocated, 8189371c9d4SSatish Balay (PetscInt)info.memory)); 8199566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 8209566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 8216f08ad05SPierre Jolivet if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx, viewer)); 8223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 823fb9695e5SSatish Balay } else if (format == PETSC_VIEWER_ASCII_INFO) { 8243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8258965ea79SLois Curfman McInnes } 826f1af5d2fSBarry Smith } else if (isdraw) { 827b0a32e0cSBarry Smith PetscDraw draw; 828ace3abfcSBarry Smith PetscBool isnull; 829f1af5d2fSBarry Smith 8309566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw)); 8319566063dSJacob Faibussowitsch PetscCall(PetscDrawIsNull(draw, &isnull)); 8323ba16761SJacob Faibussowitsch if (isnull) PetscFunctionReturn(PETSC_SUCCESS); 833f1af5d2fSBarry Smith } 83477ed5343SBarry Smith 8357da1fb6eSBarry Smith { 8368965ea79SLois Curfman McInnes /* assemble the entire matrix onto first processor. */ 8378965ea79SLois Curfman McInnes Mat A; 838d0f46423SBarry Smith PetscInt M = mat->rmap->N, N = mat->cmap->N, m, row, i, nz; 839ba8c8a56SBarry Smith PetscInt *cols; 840ba8c8a56SBarry Smith PetscScalar *vals; 8418965ea79SLois Curfman McInnes 8429566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &A)); 843dd400576SPatrick Sanan if (rank == 0) { 8449566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, M, N, M, N)); 8453a40ed3dSBarry Smith } else { 8469566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, 0, 0, M, N)); 8478965ea79SLois Curfman McInnes } 8487adad957SLisandro Dalcin /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */ 8499566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATMPIDENSE)); 8509566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 8518965ea79SLois Curfman McInnes 85239ddd567SLois Curfman McInnes /* Copy the matrix ... This isn't the most efficient means, 85339ddd567SLois Curfman McInnes but it's quick for now */ 85451022da4SBarry Smith A->insertmode = INSERT_VALUES; 8552205254eSKarl Rupp 8562205254eSKarl Rupp row = mat->rmap->rstart; 8572205254eSKarl Rupp m = mdn->A->rmap->n; 8588965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 8599566063dSJacob Faibussowitsch PetscCall(MatGetRow_MPIDense(mat, row, &nz, &cols, &vals)); 8609566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(A, 1, &row, nz, cols, vals, INSERT_VALUES)); 8619566063dSJacob Faibussowitsch PetscCall(MatRestoreRow_MPIDense(mat, row, &nz, &cols, &vals)); 86239ddd567SLois Curfman McInnes row++; 8638965ea79SLois Curfman McInnes } 8648965ea79SLois Curfman McInnes 8659566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 8669566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 8679566063dSJacob Faibussowitsch PetscCall(PetscViewerGetSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 868dd400576SPatrick Sanan if (rank == 0) { 869f4f49eeaSPierre Jolivet PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense *)A->data)->A, ((PetscObject)mat)->name)); 870f4f49eeaSPierre Jolivet PetscCall(MatView_SeqDense(((Mat_MPIDense *)A->data)->A, sviewer)); 8718965ea79SLois Curfman McInnes } 8729566063dSJacob Faibussowitsch PetscCall(PetscViewerRestoreSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 8739566063dSJacob Faibussowitsch PetscCall(MatDestroy(&A)); 8748965ea79SLois Curfman McInnes } 8753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8768965ea79SLois Curfman McInnes } 8778965ea79SLois Curfman McInnes 87866976f2fSJacob Faibussowitsch static PetscErrorCode MatView_MPIDense(Mat mat, PetscViewer viewer) 879d71ae5a4SJacob Faibussowitsch { 880*9f196a02SMartin Diehl PetscBool isascii, isbinary, isdraw, issocket; 8818965ea79SLois Curfman McInnes 882433994e6SBarry Smith PetscFunctionBegin; 883*9f196a02SMartin Diehl PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &isascii)); 8849566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 8859566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSOCKET, &issocket)); 8869566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 8870f5bd95cSBarry Smith 888*9f196a02SMartin Diehl if (isascii || issocket || isdraw) { 8899566063dSJacob Faibussowitsch PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat, viewer)); 8901baa6e33SBarry Smith } else if (isbinary) PetscCall(MatView_Dense_Binary(mat, viewer)); 8913ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8928965ea79SLois Curfman McInnes } 8938965ea79SLois Curfman McInnes 89466976f2fSJacob Faibussowitsch static PetscErrorCode MatGetInfo_MPIDense(Mat A, MatInfoType flag, MatInfo *info) 895d71ae5a4SJacob Faibussowitsch { 8963501a2bdSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 8973501a2bdSLois Curfman McInnes Mat mdn = mat->A; 8983966268fSBarry Smith PetscLogDouble isend[5], irecv[5]; 8998965ea79SLois Curfman McInnes 9003a40ed3dSBarry Smith PetscFunctionBegin; 9014e220ebcSLois Curfman McInnes info->block_size = 1.0; 9022205254eSKarl Rupp 9039566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mdn, MAT_LOCAL, info)); 9042205254eSKarl Rupp 9059371c9d4SSatish Balay isend[0] = info->nz_used; 9069371c9d4SSatish Balay isend[1] = info->nz_allocated; 9079371c9d4SSatish Balay isend[2] = info->nz_unneeded; 9089371c9d4SSatish Balay isend[3] = info->memory; 9099371c9d4SSatish Balay isend[4] = info->mallocs; 9108965ea79SLois Curfman McInnes if (flag == MAT_LOCAL) { 9114e220ebcSLois Curfman McInnes info->nz_used = isend[0]; 9124e220ebcSLois Curfman McInnes info->nz_allocated = isend[1]; 9134e220ebcSLois Curfman McInnes info->nz_unneeded = isend[2]; 9144e220ebcSLois Curfman McInnes info->memory = isend[3]; 9154e220ebcSLois Curfman McInnes info->mallocs = isend[4]; 9168965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_MAX) { 917462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_MAX, PetscObjectComm((PetscObject)A))); 9182205254eSKarl Rupp 9194e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 9204e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 9214e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 9224e220ebcSLois Curfman McInnes info->memory = irecv[3]; 9234e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 9248965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_SUM) { 925462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_SUM, PetscObjectComm((PetscObject)A))); 9262205254eSKarl Rupp 9274e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 9284e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 9294e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 9304e220ebcSLois Curfman McInnes info->memory = irecv[3]; 9314e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 9328965ea79SLois Curfman McInnes } 9334e220ebcSLois Curfman McInnes info->fill_ratio_given = 0; /* no parallel LU/ILU/Cholesky */ 9344e220ebcSLois Curfman McInnes info->fill_ratio_needed = 0; 9354e220ebcSLois Curfman McInnes info->factor_mallocs = 0; 9363ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9378965ea79SLois Curfman McInnes } 9388965ea79SLois Curfman McInnes 93966976f2fSJacob Faibussowitsch static PetscErrorCode MatSetOption_MPIDense(Mat A, MatOption op, PetscBool flg) 940d71ae5a4SJacob Faibussowitsch { 94139ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 9428965ea79SLois Curfman McInnes 9433a40ed3dSBarry Smith PetscFunctionBegin; 94412c028f9SKris Buschelman switch (op) { 945512a5fc5SBarry Smith case MAT_NEW_NONZERO_LOCATIONS: 94612c028f9SKris Buschelman case MAT_NEW_NONZERO_LOCATION_ERR: 94712c028f9SKris Buschelman case MAT_NEW_NONZERO_ALLOCATION_ERR: 94843674050SBarry Smith MatCheckPreallocated(A, 1); 9499566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 95012c028f9SKris Buschelman break; 95112c028f9SKris Buschelman case MAT_ROW_ORIENTED: 95243674050SBarry Smith MatCheckPreallocated(A, 1); 9534e0d8c25SBarry Smith a->roworiented = flg; 9549566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 95512c028f9SKris Buschelman break; 956d71ae5a4SJacob Faibussowitsch case MAT_IGNORE_OFF_PROC_ENTRIES: 957d71ae5a4SJacob Faibussowitsch a->donotstash = flg; 958d71ae5a4SJacob Faibussowitsch break; 95977e54ba9SKris Buschelman case MAT_SYMMETRIC: 96077e54ba9SKris Buschelman case MAT_STRUCTURALLY_SYMMETRIC: 9619a4540c5SBarry Smith case MAT_HERMITIAN: 9629a4540c5SBarry Smith case MAT_SYMMETRY_ETERNAL: 963b94d7dedSBarry Smith case MAT_STRUCTURAL_SYMMETRY_ETERNAL: 964b94d7dedSBarry Smith case MAT_SPD: 965b94d7dedSBarry Smith case MAT_SPD_ETERNAL: 966b94d7dedSBarry Smith /* if the diagonal matrix is square it inherits some of the properties above */ 9679725ddffSPierre Jolivet if (a->A && A->rmap->n == A->cmap->n) PetscCall(MatSetOption(a->A, op, flg)); 96877e54ba9SKris Buschelman break; 969d71ae5a4SJacob Faibussowitsch default: 970888c827cSStefano Zampini break; 9713a40ed3dSBarry Smith } 9723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9738965ea79SLois Curfman McInnes } 9748965ea79SLois Curfman McInnes 97566976f2fSJacob Faibussowitsch static PetscErrorCode MatDiagonalScale_MPIDense(Mat A, Vec ll, Vec rr) 976d71ae5a4SJacob Faibussowitsch { 9775b2fa520SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 978637a0070SStefano Zampini const PetscScalar *l; 979637a0070SStefano Zampini PetscScalar x, *v, *vv, *r; 980637a0070SStefano Zampini PetscInt i, j, s2a, s3a, s2, s3, m = mdn->A->rmap->n, n = mdn->A->cmap->n, lda; 9815b2fa520SLois Curfman McInnes 9825b2fa520SLois Curfman McInnes PetscFunctionBegin; 9839566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(mdn->A, &vv)); 9849566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mdn->A, &lda)); 9859566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &s2, &s3)); 9865b2fa520SLois Curfman McInnes if (ll) { 9879566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(ll, &s2a)); 98808401ef6SPierre Jolivet PetscCheck(s2a == s2, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2); 9899566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(ll, &l)); 9905b2fa520SLois Curfman McInnes for (i = 0; i < m; i++) { 9915b2fa520SLois Curfman McInnes x = l[i]; 992637a0070SStefano Zampini v = vv + i; 9939371c9d4SSatish Balay for (j = 0; j < n; j++) { 9949371c9d4SSatish Balay (*v) *= x; 9959371c9d4SSatish Balay v += lda; 9969371c9d4SSatish Balay } 9975b2fa520SLois Curfman McInnes } 9989566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(ll, &l)); 9999566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 10005b2fa520SLois Curfman McInnes } 10015b2fa520SLois Curfman McInnes if (rr) { 1002637a0070SStefano Zampini const PetscScalar *ar; 1003637a0070SStefano Zampini 10049566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(rr, &s3a)); 100508401ef6SPierre Jolivet PetscCheck(s3a == s3, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3); 10069566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(rr, &ar)); 10076f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 10089566063dSJacob Faibussowitsch PetscCall(VecGetArray(mdn->lvec, &r)); 10099566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 10109566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 10119566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(rr, &ar)); 10125b2fa520SLois Curfman McInnes for (i = 0; i < n; i++) { 10135b2fa520SLois Curfman McInnes x = r[i]; 1014637a0070SStefano Zampini v = vv + i * lda; 10152205254eSKarl Rupp for (j = 0; j < m; j++) (*v++) *= x; 10165b2fa520SLois Curfman McInnes } 10179566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(mdn->lvec, &r)); 10189566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 10195b2fa520SLois Curfman McInnes } 10209566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(mdn->A, &vv)); 10213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10225b2fa520SLois Curfman McInnes } 10235b2fa520SLois Curfman McInnes 102466976f2fSJacob Faibussowitsch static PetscErrorCode MatNorm_MPIDense(Mat A, NormType type, PetscReal *nrm) 1025d71ae5a4SJacob Faibussowitsch { 10263501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 102713f74950SBarry Smith PetscInt i, j; 1028e91c04dfSPierre Jolivet PetscMPIInt size; 1029329f5518SBarry Smith PetscReal sum = 0.0; 1030637a0070SStefano Zampini const PetscScalar *av, *v; 10313501a2bdSLois Curfman McInnes 10323a40ed3dSBarry Smith PetscFunctionBegin; 10339566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, &av)); 1034637a0070SStefano Zampini v = av; 10359566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1036616b8fbbSStefano Zampini if (size == 1) { 10379566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, nrm)); 10383501a2bdSLois Curfman McInnes } else { 10393501a2bdSLois Curfman McInnes if (type == NORM_FROBENIUS) { 1040d0f46423SBarry Smith for (i = 0; i < mdn->A->cmap->n * mdn->A->rmap->n; i++) { 10419371c9d4SSatish Balay sum += PetscRealPart(PetscConj(*v) * (*v)); 10429371c9d4SSatish Balay v++; 10433501a2bdSLois Curfman McInnes } 1044462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(&sum, nrm, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 10458f1a2a5eSBarry Smith *nrm = PetscSqrtReal(*nrm); 10469566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * mdn->A->cmap->n * mdn->A->rmap->n)); 10473a40ed3dSBarry Smith } else if (type == NORM_1) { 1048e91c04dfSPierre Jolivet PetscReal *tmp; 1049e91c04dfSPierre Jolivet 1050e91c04dfSPierre Jolivet PetscCall(PetscCalloc1(A->cmap->N, &tmp)); 1051064f8208SBarry Smith *nrm = 0.0; 1052637a0070SStefano Zampini v = av; 1053d0f46423SBarry Smith for (j = 0; j < mdn->A->cmap->n; j++) { 1054d0f46423SBarry Smith for (i = 0; i < mdn->A->rmap->n; i++) { 10559371c9d4SSatish Balay tmp[j] += PetscAbsScalar(*v); 10569371c9d4SSatish Balay v++; 10573501a2bdSLois Curfman McInnes } 10583501a2bdSLois Curfman McInnes } 1059e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, tmp, A->cmap->N, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 1060d0f46423SBarry Smith for (j = 0; j < A->cmap->N; j++) { 1061e91c04dfSPierre Jolivet if (tmp[j] > *nrm) *nrm = tmp[j]; 10623501a2bdSLois Curfman McInnes } 1063e91c04dfSPierre Jolivet PetscCall(PetscFree(tmp)); 10649566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(A->cmap->n * A->rmap->n)); 10653a40ed3dSBarry Smith } else if (type == NORM_INFINITY) { /* max row norm */ 1066e91c04dfSPierre Jolivet PetscCall(MatNorm(mdn->A, type, nrm)); 1067e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, nrm, 1, MPIU_REAL, MPIU_MAX, PetscObjectComm((PetscObject)A))); 1068ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for two norm"); 10693501a2bdSLois Curfman McInnes } 10709566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, &av)); 10713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10723501a2bdSLois Curfman McInnes } 10733501a2bdSLois Curfman McInnes 107466976f2fSJacob Faibussowitsch static PetscErrorCode MatTranspose_MPIDense(Mat A, MatReuse reuse, Mat *matout) 1075d71ae5a4SJacob Faibussowitsch { 10763501a2bdSLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10773501a2bdSLois Curfman McInnes Mat B; 1078d0f46423SBarry Smith PetscInt M = A->rmap->N, N = A->cmap->N, m, n, *rwork, rstart = A->rmap->rstart; 1079637a0070SStefano Zampini PetscInt j, i, lda; 108087828ca2SBarry Smith PetscScalar *v; 10813501a2bdSLois Curfman McInnes 10823a40ed3dSBarry Smith PetscFunctionBegin; 10837fb60732SBarry Smith if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *matout)); 1084cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { 10859566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 10869566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->cmap->n, A->rmap->n, N, M)); 10879566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)A)->type_name)); 10889566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(B, NULL)); 1089637a0070SStefano Zampini } else B = *matout; 10903501a2bdSLois Curfman McInnes 10919371c9d4SSatish Balay m = a->A->rmap->n; 10929371c9d4SSatish Balay n = a->A->cmap->n; 10939566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)&v)); 10949566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 10959566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &rwork)); 10963501a2bdSLois Curfman McInnes for (i = 0; i < m; i++) rwork[i] = rstart + i; 10971acff37aSSatish Balay for (j = 0; j < n; j++) { 10989566063dSJacob Faibussowitsch PetscCall(MatSetValues(B, 1, &j, m, rwork, v, INSERT_VALUES)); 10998e3a54c0SPierre Jolivet v = PetscSafePointerPlusOffset(v, lda); 11003501a2bdSLois Curfman McInnes } 11019566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)&v)); 11029566063dSJacob Faibussowitsch PetscCall(PetscFree(rwork)); 11039566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 11049566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 1105cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) { 11063501a2bdSLois Curfman McInnes *matout = B; 11073501a2bdSLois Curfman McInnes } else { 11089566063dSJacob Faibussowitsch PetscCall(MatHeaderMerge(A, &B)); 11093501a2bdSLois Curfman McInnes } 11103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1111096963f5SLois Curfman McInnes } 1112096963f5SLois Curfman McInnes 11136849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat, MatDuplicateOption, Mat *); 111452c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat, PetscScalar); 11158965ea79SLois Curfman McInnes 111666976f2fSJacob Faibussowitsch static PetscErrorCode MatSetUp_MPIDense(Mat A) 1117d71ae5a4SJacob Faibussowitsch { 1118273d9f13SBarry Smith PetscFunctionBegin; 11199566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 11209566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 112148a46eb9SPierre Jolivet if (!A->preallocated) PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 11223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1123273d9f13SBarry Smith } 1124273d9f13SBarry Smith 112566976f2fSJacob Faibussowitsch static PetscErrorCode MatAXPY_MPIDense(Mat Y, PetscScalar alpha, Mat X, MatStructure str) 1126d71ae5a4SJacob Faibussowitsch { 1127488007eeSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)Y->data, *B = (Mat_MPIDense *)X->data; 1128488007eeSBarry Smith 1129488007eeSBarry Smith PetscFunctionBegin; 11309566063dSJacob Faibussowitsch PetscCall(MatAXPY(A->A, alpha, B->A, str)); 11313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1132488007eeSBarry Smith } 1133488007eeSBarry Smith 113466976f2fSJacob Faibussowitsch static PetscErrorCode MatConjugate_MPIDense(Mat mat) 1135d71ae5a4SJacob Faibussowitsch { 1136ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 1137ba337c44SJed Brown 1138ba337c44SJed Brown PetscFunctionBegin; 11399566063dSJacob Faibussowitsch PetscCall(MatConjugate(a->A)); 11403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1141ba337c44SJed Brown } 1142ba337c44SJed Brown 114366976f2fSJacob Faibussowitsch static PetscErrorCode MatRealPart_MPIDense(Mat A) 1144d71ae5a4SJacob Faibussowitsch { 1145ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1146ba337c44SJed Brown 1147ba337c44SJed Brown PetscFunctionBegin; 11489566063dSJacob Faibussowitsch PetscCall(MatRealPart(a->A)); 11493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1150ba337c44SJed Brown } 1151ba337c44SJed Brown 115266976f2fSJacob Faibussowitsch static PetscErrorCode MatImaginaryPart_MPIDense(Mat A) 1153d71ae5a4SJacob Faibussowitsch { 1154ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1155ba337c44SJed Brown 1156ba337c44SJed Brown PetscFunctionBegin; 11579566063dSJacob Faibussowitsch PetscCall(MatImaginaryPart(a->A)); 11583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1159ba337c44SJed Brown } 1160ba337c44SJed Brown 1161d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetColumnVector_MPIDense(Mat A, Vec v, PetscInt col) 1162d71ae5a4SJacob Faibussowitsch { 1163637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 116449a6ff4bSBarry Smith 116549a6ff4bSBarry Smith PetscFunctionBegin; 116628b400f6SJacob Faibussowitsch PetscCheck(a->A, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing local matrix"); 116728b400f6SJacob Faibussowitsch PetscCheck(a->A->ops->getcolumnvector, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing get column operation"); 11689566063dSJacob Faibussowitsch PetscCall((*a->A->ops->getcolumnvector)(a->A, v, col)); 11693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 117049a6ff4bSBarry Smith } 117149a6ff4bSBarry Smith 1172857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat, PetscInt, PetscReal *); 117352c5f739Sprj- 117466976f2fSJacob Faibussowitsch static PetscErrorCode MatGetColumnReductions_MPIDense(Mat A, PetscInt type, PetscReal *reductions) 1175d71ae5a4SJacob Faibussowitsch { 1176a873a8cdSSam Reynolds PetscInt i, m, n; 11770716a85fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 11780716a85fSBarry Smith 11790716a85fSBarry Smith PetscFunctionBegin; 11809566063dSJacob Faibussowitsch PetscCall(MatGetSize(A, &m, &n)); 1181857cbf51SRichard Tran Mills if (type == REDUCTION_MEAN_REALPART) { 1182e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_REALPART, reductions)); 1183857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_IMAGINARYPART) { 1184e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_IMAGINARYPART, reductions)); 1185a873a8cdSSam Reynolds } else { 1186e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, type, reductions)); 1187a873a8cdSSam Reynolds } 1188857cbf51SRichard Tran Mills if (type == NORM_2) { 1189e91c04dfSPierre Jolivet for (i = 0; i < n; i++) reductions[i] *= reductions[i]; 11900716a85fSBarry Smith } 1191857cbf51SRichard Tran Mills if (type == NORM_INFINITY) { 1192e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, reductions, n, MPIU_REAL, MPIU_MAX, A->hdr.comm)); 11930716a85fSBarry Smith } else { 1194e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, reductions, n, MPIU_REAL, MPIU_SUM, A->hdr.comm)); 11950716a85fSBarry Smith } 1196857cbf51SRichard Tran Mills if (type == NORM_2) { 1197a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] = PetscSqrtReal(reductions[i]); 1198857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) { 1199a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] /= m; 12000716a85fSBarry Smith } 12013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12020716a85fSBarry Smith } 12030716a85fSBarry Smith 1204d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetRandom_MPIDense(Mat x, PetscRandom rctx) 1205d71ae5a4SJacob Faibussowitsch { 120673a71a0fSBarry Smith Mat_MPIDense *d = (Mat_MPIDense *)x->data; 120773a71a0fSBarry Smith 120873a71a0fSBarry Smith PetscFunctionBegin; 12099566063dSJacob Faibussowitsch PetscCall(MatSetRandom(d->A, rctx)); 12103faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 12113faff063SStefano Zampini x->offloadmask = d->A->offloadmask; 12123faff063SStefano Zampini #endif 12133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 121473a71a0fSBarry Smith } 121573a71a0fSBarry Smith 1216d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A, PetscBool *missing, PetscInt *d) 1217d71ae5a4SJacob Faibussowitsch { 12183b49f96aSBarry Smith PetscFunctionBegin; 12193b49f96aSBarry Smith *missing = PETSC_FALSE; 12203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12213b49f96aSBarry Smith } 12223b49f96aSBarry Smith 12234222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1224cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12256718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1226a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12276718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat, Mat, PetscBool *); 12286718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat, PetscViewer); 12295d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat); 1230cc48ffa7SToby Isaac 123109dc0095SBarry Smith static struct _MatOps MatOps_Values = {MatSetValues_MPIDense, 123209dc0095SBarry Smith MatGetRow_MPIDense, 123309dc0095SBarry Smith MatRestoreRow_MPIDense, 123409dc0095SBarry Smith MatMult_MPIDense, 123597304618SKris Buschelman /* 4*/ MatMultAdd_MPIDense, 12367c922b88SBarry Smith MatMultTranspose_MPIDense, 12377c922b88SBarry Smith MatMultTransposeAdd_MPIDense, 1238f4259b30SLisandro Dalcin NULL, 1239f4259b30SLisandro Dalcin NULL, 1240f4259b30SLisandro Dalcin NULL, 1241f4259b30SLisandro Dalcin /* 10*/ NULL, 1242f4259b30SLisandro Dalcin NULL, 1243f4259b30SLisandro Dalcin NULL, 1244f4259b30SLisandro Dalcin NULL, 124509dc0095SBarry Smith MatTranspose_MPIDense, 124697304618SKris Buschelman /* 15*/ MatGetInfo_MPIDense, 12476e4ee0c6SHong Zhang MatEqual_MPIDense, 124809dc0095SBarry Smith MatGetDiagonal_MPIDense, 12495b2fa520SLois Curfman McInnes MatDiagonalScale_MPIDense, 125009dc0095SBarry Smith MatNorm_MPIDense, 125197304618SKris Buschelman /* 20*/ MatAssemblyBegin_MPIDense, 125209dc0095SBarry Smith MatAssemblyEnd_MPIDense, 125309dc0095SBarry Smith MatSetOption_MPIDense, 125409dc0095SBarry Smith MatZeroEntries_MPIDense, 1255d519adbfSMatthew Knepley /* 24*/ MatZeroRows_MPIDense, 1256f4259b30SLisandro Dalcin NULL, 1257f4259b30SLisandro Dalcin NULL, 1258f4259b30SLisandro Dalcin NULL, 1259f4259b30SLisandro Dalcin NULL, 12604994cf47SJed Brown /* 29*/ MatSetUp_MPIDense, 1261f4259b30SLisandro Dalcin NULL, 1262f4259b30SLisandro Dalcin NULL, 1263c56a70eeSBarry Smith MatGetDiagonalBlock_MPIDense, 1264f4259b30SLisandro Dalcin NULL, 1265d519adbfSMatthew Knepley /* 34*/ MatDuplicate_MPIDense, 1266f4259b30SLisandro Dalcin NULL, 1267f4259b30SLisandro Dalcin NULL, 1268f4259b30SLisandro Dalcin NULL, 1269f4259b30SLisandro Dalcin NULL, 1270d519adbfSMatthew Knepley /* 39*/ MatAXPY_MPIDense, 12717dae84e0SHong Zhang MatCreateSubMatrices_MPIDense, 1272f4259b30SLisandro Dalcin NULL, 127309dc0095SBarry Smith MatGetValues_MPIDense, 1274a76f77c3SStefano Zampini MatCopy_MPIDense, 1275f4259b30SLisandro Dalcin /* 44*/ NULL, 127609dc0095SBarry Smith MatScale_MPIDense, 12772f605a99SJose E. Roman MatShift_MPIDense, 1278f4259b30SLisandro Dalcin NULL, 1279f4259b30SLisandro Dalcin NULL, 128073a71a0fSBarry Smith /* 49*/ MatSetRandom_MPIDense, 1281f4259b30SLisandro Dalcin NULL, 1282f4259b30SLisandro Dalcin NULL, 1283f4259b30SLisandro Dalcin NULL, 1284f4259b30SLisandro Dalcin NULL, 1285f4259b30SLisandro Dalcin /* 54*/ NULL, 1286f4259b30SLisandro Dalcin NULL, 1287f4259b30SLisandro Dalcin NULL, 1288f4259b30SLisandro Dalcin NULL, 1289f4259b30SLisandro Dalcin NULL, 12907dae84e0SHong Zhang /* 59*/ MatCreateSubMatrix_MPIDense, 1291b9b97703SBarry Smith MatDestroy_MPIDense, 1292b9b97703SBarry Smith MatView_MPIDense, 1293f4259b30SLisandro Dalcin NULL, 1294f4259b30SLisandro Dalcin NULL, 1295f4259b30SLisandro Dalcin /* 64*/ NULL, 1296f4259b30SLisandro Dalcin NULL, 1297f4259b30SLisandro Dalcin NULL, 1298f4259b30SLisandro Dalcin NULL, 1299f4259b30SLisandro Dalcin NULL, 1300f4259b30SLisandro Dalcin /* 69*/ NULL, 1301f4259b30SLisandro Dalcin NULL, 1302f4259b30SLisandro Dalcin NULL, 1303f4259b30SLisandro Dalcin NULL, 1304f4259b30SLisandro Dalcin NULL, 1305f4259b30SLisandro Dalcin /* 74*/ NULL, 1306f4259b30SLisandro Dalcin NULL, 1307f4259b30SLisandro Dalcin NULL, 1308f4259b30SLisandro Dalcin NULL, 13098bb0f5c6SPierre Jolivet MatLoad_MPIDense, 1310f4259b30SLisandro Dalcin /* 79*/ NULL, 1311f4259b30SLisandro Dalcin NULL, 1312f4259b30SLisandro Dalcin NULL, 1313f4259b30SLisandro Dalcin NULL, 13148bb0f5c6SPierre Jolivet /* 83*/ NULL, 1315f4259b30SLisandro Dalcin NULL, 1316f4259b30SLisandro Dalcin NULL, 1317f4259b30SLisandro Dalcin NULL, 13186718818eSStefano Zampini MatMatTransposeMultSymbolic_MPIDense_MPIDense, 1319cc48ffa7SToby Isaac MatMatTransposeMultNumeric_MPIDense_MPIDense, 13208bb0f5c6SPierre Jolivet /* 89*/ NULL, 13218bb0f5c6SPierre Jolivet MatProductSetFromOptions_MPIDense, 1322f4259b30SLisandro Dalcin NULL, 1323f4259b30SLisandro Dalcin NULL, 1324ba337c44SJed Brown MatConjugate_MPIDense, 13258bb0f5c6SPierre Jolivet /* 94*/ NULL, 1326f4259b30SLisandro Dalcin NULL, 1327ba337c44SJed Brown MatRealPart_MPIDense, 1328ba337c44SJed Brown MatImaginaryPart_MPIDense, 1329f4259b30SLisandro Dalcin NULL, 13308bb0f5c6SPierre Jolivet /*99*/ NULL, 13318bb0f5c6SPierre Jolivet NULL, 13328bb0f5c6SPierre Jolivet NULL, 13338bb0f5c6SPierre Jolivet NULL, 13348bb0f5c6SPierre Jolivet MatGetColumnVector_MPIDense, 13358bb0f5c6SPierre Jolivet /*104*/ MatMissingDiagonal_MPIDense, 13368bb0f5c6SPierre Jolivet NULL, 13378bb0f5c6SPierre Jolivet NULL, 13388bb0f5c6SPierre Jolivet NULL, 1339f4259b30SLisandro Dalcin NULL, 1340f4259b30SLisandro Dalcin /*109*/ NULL, 1341f4259b30SLisandro Dalcin NULL, 1342f4259b30SLisandro Dalcin NULL, 1343459e8d23SBlanca Mellado Pinto MatMultHermitianTranspose_MPIDense, 1344459e8d23SBlanca Mellado Pinto MatMultHermitianTransposeAdd_MPIDense, 13458bb0f5c6SPierre Jolivet /*114*/ NULL, 13468bb0f5c6SPierre Jolivet NULL, 13478bb0f5c6SPierre Jolivet MatGetColumnReductions_MPIDense, 13488bb0f5c6SPierre Jolivet NULL, 13498bb0f5c6SPierre Jolivet NULL, 13508bb0f5c6SPierre Jolivet NULL, 13518bb0f5c6SPierre Jolivet /*120*/ NULL, 13528bb0f5c6SPierre Jolivet MatTransposeMatMultSymbolic_MPIDense_MPIDense, 13538bb0f5c6SPierre Jolivet MatTransposeMatMultNumeric_MPIDense_MPIDense, 1354f4259b30SLisandro Dalcin NULL, 1355f4259b30SLisandro Dalcin /*124*/ NULL, 13568bb0f5c6SPierre Jolivet NULL, 1357f4259b30SLisandro Dalcin NULL, 1358f4259b30SLisandro Dalcin NULL, 1359f4259b30SLisandro Dalcin NULL, 1360f4259b30SLisandro Dalcin /*129*/ NULL, 1361f4259b30SLisandro Dalcin NULL, 13628bb0f5c6SPierre Jolivet MatCreateMPIMatConcatenateSeqMat_MPIDense, 13638bb0f5c6SPierre Jolivet NULL, 1364f4259b30SLisandro Dalcin NULL, 1365f4259b30SLisandro Dalcin /*134*/ NULL, 1366f4259b30SLisandro Dalcin NULL, 1367f4259b30SLisandro Dalcin NULL, 1368f4259b30SLisandro Dalcin NULL, 1369f4259b30SLisandro Dalcin NULL, 1370f4259b30SLisandro Dalcin /*139*/ NULL, 1371f4259b30SLisandro Dalcin NULL, 1372f4259b30SLisandro Dalcin NULL, 137303db1824SAlex Lindsay NULL, 1374dec0b466SHong Zhang NULL}; 13758965ea79SLois Curfman McInnes 137666976f2fSJacob Faibussowitsch static PetscErrorCode MatMPIDenseSetPreallocation_MPIDense(Mat mat, PetscScalar *data) 1377d71ae5a4SJacob Faibussowitsch { 1378637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 137947d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 1380a23d5eceSKris Buschelman 1381a23d5eceSKris Buschelman PetscFunctionBegin; 138228b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 13839566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->rmap)); 13849566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->cmap)); 1385637a0070SStefano Zampini if (!a->A) { 13869566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 13879566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, mat->rmap->n, mat->cmap->N, mat->rmap->n, mat->cmap->N)); 1388637a0070SStefano Zampini } 138947d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 139047d993e7Ssuyashtn PetscBool iscuda; 13919566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSECUDA, &iscuda)); 139247d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 139347d993e7Ssuyashtn #endif 139447d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 139547d993e7Ssuyashtn PetscBool iship; 139647d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSEHIP, &iship)); 139747d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 139847d993e7Ssuyashtn #endif 139947d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 14009566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(a->A, data)); 140147d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 14023faff063SStefano Zampini mat->offloadmask = a->A->offloadmask; 14033faff063SStefano Zampini #endif 1404637a0070SStefano Zampini mat->preallocated = PETSC_TRUE; 14056f08ad05SPierre Jolivet mat->assembled = PETSC_TRUE; 14063ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1407a23d5eceSKris Buschelman } 1408a23d5eceSKris Buschelman 1409d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1410d71ae5a4SJacob Faibussowitsch { 14114e29119aSPierre Jolivet Mat B, C; 14124e29119aSPierre Jolivet 14134e29119aSPierre Jolivet PetscFunctionBegin; 14149566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMat(A, MAT_INITIAL_MATRIX, &C)); 14159566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqDense(C, MATSEQDENSE, MAT_INITIAL_MATRIX, &B)); 14169566063dSJacob Faibussowitsch PetscCall(MatDestroy(&C)); 14174e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14184e29119aSPierre Jolivet C = *newmat; 14194e29119aSPierre Jolivet } else C = NULL; 14209566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14219566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 14224e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 14239566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 14244e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 14253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14264e29119aSPierre Jolivet } 14274e29119aSPierre Jolivet 142866976f2fSJacob Faibussowitsch static PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1429d71ae5a4SJacob Faibussowitsch { 14304e29119aSPierre Jolivet Mat B, C; 14314e29119aSPierre Jolivet 14324e29119aSPierre Jolivet PetscFunctionBegin; 14339566063dSJacob Faibussowitsch PetscCall(MatDenseGetLocalMatrix(A, &C)); 14349566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqDense_SeqAIJ(C, MATSEQAIJ, MAT_INITIAL_MATRIX, &B)); 14354e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14364e29119aSPierre Jolivet C = *newmat; 14374e29119aSPierre Jolivet } else C = NULL; 14389566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14399566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 14404e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 14419566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 14424e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 14433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14444e29119aSPierre Jolivet } 14454e29119aSPierre Jolivet 144665b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 1447d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1448d71ae5a4SJacob Faibussowitsch { 1449f709e8d7SPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14508ea901baSHong Zhang Mat mat_elemental; 145132d7a744SHong Zhang PetscScalar *v; 1452f709e8d7SPierre Jolivet PetscInt m = A->rmap->n, N = A->cmap->N, rstart = A->rmap->rstart, i, *rows, *cols, lda; 14538ea901baSHong Zhang 14548baccfbdSHong Zhang PetscFunctionBegin; 1455378336b6SHong Zhang if (reuse == MAT_REUSE_MATRIX) { 1456378336b6SHong Zhang mat_elemental = *newmat; 14579566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(*newmat)); 1458378336b6SHong Zhang } else { 14599566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental)); 14609566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat_elemental, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 14619566063dSJacob Faibussowitsch PetscCall(MatSetType(mat_elemental, MATELEMENTAL)); 14629566063dSJacob Faibussowitsch PetscCall(MatSetUp(mat_elemental)); 14639566063dSJacob Faibussowitsch PetscCall(MatSetOption(mat_elemental, MAT_ROW_ORIENTED, PETSC_FALSE)); 1464378336b6SHong Zhang } 1465378336b6SHong Zhang 14669566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &rows, N, &cols)); 146732d7a744SHong Zhang for (i = 0; i < N; i++) cols[i] = i; 146832d7a744SHong Zhang for (i = 0; i < m; i++) rows[i] = rstart + i; 14698ea901baSHong Zhang 1470637a0070SStefano Zampini /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */ 14719566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(A, &v)); 1472f709e8d7SPierre Jolivet PetscCall(MatDenseGetLDA(a->A, &lda)); 1473f709e8d7SPierre Jolivet if (lda == m) PetscCall(MatSetValues(mat_elemental, m, rows, N, cols, v, ADD_VALUES)); 1474f709e8d7SPierre Jolivet else { 1475f709e8d7SPierre Jolivet for (i = 0; i < N; i++) PetscCall(MatSetValues(mat_elemental, m, rows, 1, &i, v + lda * i, ADD_VALUES)); 1476f709e8d7SPierre Jolivet } 14779566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY)); 14789566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY)); 14799566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(A, &v)); 14809566063dSJacob Faibussowitsch PetscCall(PetscFree2(rows, cols)); 14818ea901baSHong Zhang 1482511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 14839566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &mat_elemental)); 14848ea901baSHong Zhang } else { 14858ea901baSHong Zhang *newmat = mat_elemental; 14868ea901baSHong Zhang } 14873ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14888baccfbdSHong Zhang } 148965b80a83SHong Zhang #endif 14908baccfbdSHong Zhang 1491d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A, PetscInt col, PetscScalar **vals) 1492d71ae5a4SJacob Faibussowitsch { 149386aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 149486aefd0dSHong Zhang 149586aefd0dSHong Zhang PetscFunctionBegin; 14969566063dSJacob Faibussowitsch PetscCall(MatDenseGetColumn(mat->A, col, vals)); 14973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 149886aefd0dSHong Zhang } 149986aefd0dSHong Zhang 1500d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A, PetscScalar **vals) 1501d71ae5a4SJacob Faibussowitsch { 150286aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 150386aefd0dSHong Zhang 150486aefd0dSHong Zhang PetscFunctionBegin; 15059566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreColumn(mat->A, vals)); 15063ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 150786aefd0dSHong Zhang } 150886aefd0dSHong Zhang 1509d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm, Mat inmat, PetscInt n, MatReuse scall, Mat *outmat) 1510d71ae5a4SJacob Faibussowitsch { 151194e2cb23SJakub Kruzik Mat_MPIDense *mat; 151294e2cb23SJakub Kruzik PetscInt m, nloc, N; 151394e2cb23SJakub Kruzik 151494e2cb23SJakub Kruzik PetscFunctionBegin; 15159566063dSJacob Faibussowitsch PetscCall(MatGetSize(inmat, &m, &N)); 15169566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(inmat, NULL, &nloc)); 151794e2cb23SJakub Kruzik if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */ 151894e2cb23SJakub Kruzik PetscInt sum; 151994e2cb23SJakub Kruzik 152048a46eb9SPierre Jolivet if (n == PETSC_DECIDE) PetscCall(PetscSplitOwnership(comm, &n, &N)); 152194e2cb23SJakub Kruzik /* Check sum(n) = N */ 1522462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(&n, &sum, 1, MPIU_INT, MPI_SUM, comm)); 152308401ef6SPierre Jolivet PetscCheck(sum == N, PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT, sum, N); 152494e2cb23SJakub Kruzik 15259566063dSJacob Faibussowitsch PetscCall(MatCreateDense(comm, m, n, PETSC_DETERMINE, N, NULL, outmat)); 15269566063dSJacob Faibussowitsch PetscCall(MatSetOption(*outmat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 152794e2cb23SJakub Kruzik } 152894e2cb23SJakub Kruzik 152994e2cb23SJakub Kruzik /* numeric phase */ 153094e2cb23SJakub Kruzik mat = (Mat_MPIDense *)(*outmat)->data; 15319566063dSJacob Faibussowitsch PetscCall(MatCopy(inmat, mat->A, SAME_NONZERO_PATTERN)); 15323ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 153394e2cb23SJakub Kruzik } 153494e2cb23SJakub Kruzik 1535d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1536d71ae5a4SJacob Faibussowitsch { 15376947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15386947451fSStefano Zampini PetscInt lda; 15396947451fSStefano Zampini 15406947451fSStefano Zampini PetscFunctionBegin; 154128b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 154228b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1543d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 15446947451fSStefano Zampini a->vecinuse = col + 1; 15459566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 15469566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, (PetscScalar **)&a->ptrinuse)); 15478e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 15486947451fSStefano Zampini *v = a->cvec; 15493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15506947451fSStefano Zampini } 15516947451fSStefano Zampini 1552d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1553d71ae5a4SJacob Faibussowitsch { 15546947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15556947451fSStefano Zampini 15566947451fSStefano Zampini PetscFunctionBegin; 155728b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 155828b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector"); 15594186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 15606947451fSStefano Zampini a->vecinuse = 0; 15619566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, (PetscScalar **)&a->ptrinuse)); 15629566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1563742765d3SMatthew Knepley if (v) *v = NULL; 15643ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15656947451fSStefano Zampini } 15666947451fSStefano Zampini 1567d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1568d71ae5a4SJacob Faibussowitsch { 15696947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15706947451fSStefano Zampini PetscInt lda; 15716947451fSStefano Zampini 15726947451fSStefano Zampini PetscFunctionBegin; 157328b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 157428b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1575d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 15766947451fSStefano Zampini a->vecinuse = col + 1; 15779566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 15789566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &a->ptrinuse)); 15798e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 15809566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(a->cvec)); 15816947451fSStefano Zampini *v = a->cvec; 15823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15836947451fSStefano Zampini } 15846947451fSStefano Zampini 1585d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1586d71ae5a4SJacob Faibussowitsch { 15876947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15886947451fSStefano Zampini 15896947451fSStefano Zampini PetscFunctionBegin; 15905f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 15915f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 15924186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 15936947451fSStefano Zampini a->vecinuse = 0; 15949566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &a->ptrinuse)); 15959566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(a->cvec)); 15969566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1597742765d3SMatthew Knepley if (v) *v = NULL; 15983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15996947451fSStefano Zampini } 16006947451fSStefano Zampini 1601d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1602d71ae5a4SJacob Faibussowitsch { 16036947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16046947451fSStefano Zampini PetscInt lda; 16056947451fSStefano Zampini 16066947451fSStefano Zampini PetscFunctionBegin; 16075f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 16085f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1609d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 16106947451fSStefano Zampini a->vecinuse = col + 1; 16119566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 16129566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 16138e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 16146947451fSStefano Zampini *v = a->cvec; 16153ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16166947451fSStefano Zampini } 16176947451fSStefano Zampini 1618d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1619d71ae5a4SJacob Faibussowitsch { 16206947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16216947451fSStefano Zampini 16226947451fSStefano Zampini PetscFunctionBegin; 16235f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 16245f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 16254186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 16266947451fSStefano Zampini a->vecinuse = 0; 16279566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 16289566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1629742765d3SMatthew Knepley if (v) *v = NULL; 16303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16316947451fSStefano Zampini } 16326947451fSStefano Zampini 163366976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A, PetscInt rbegin, PetscInt rend, PetscInt cbegin, PetscInt cend, Mat *v) 1634d71ae5a4SJacob Faibussowitsch { 16355ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1636616b8fbbSStefano Zampini Mat_MPIDense *c; 1637616b8fbbSStefano Zampini MPI_Comm comm; 1638d016bddeSToby Isaac PetscInt prbegin, prend, pcbegin, pcend; 16395ea7661aSPierre Jolivet 16405ea7661aSPierre Jolivet PetscFunctionBegin; 16419566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 16425f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 16435f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1644d016bddeSToby Isaac prbegin = PetscMax(0, PetscMin(A->rmap->rend, rbegin) - A->rmap->rstart); 1645d016bddeSToby Isaac prend = PetscMin(A->rmap->n, PetscMax(0, rend - A->rmap->rstart)); 1646d016bddeSToby Isaac pcbegin = PetscMax(0, PetscMin(A->cmap->rend, cbegin) - A->cmap->rstart); 1647d016bddeSToby Isaac pcend = PetscMin(A->cmap->n, PetscMax(0, cend - A->cmap->rstart)); 16485ea7661aSPierre Jolivet if (!a->cmat) { 16499566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &a->cmat)); 16509566063dSJacob Faibussowitsch PetscCall(MatSetType(a->cmat, ((PetscObject)A)->type_name)); 1651a2748737SPierre Jolivet if (rend - rbegin == A->rmap->N) PetscCall(PetscLayoutReference(A->rmap, &a->cmat->rmap)); 1652a2748737SPierre Jolivet else { 1653d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, prend - prbegin)); 1654a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1655a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1656a2748737SPierre Jolivet } 1657d016bddeSToby Isaac if (cend - cbegin == A->cmap->N) PetscCall(PetscLayoutReference(A->cmap, &a->cmat->cmap)); 1658d016bddeSToby Isaac else { 1659d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->cmap, pcend - pcbegin)); 16609566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 16619566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1662a2748737SPierre Jolivet } 1663616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 1664d016bddeSToby Isaac c->sub_rbegin = rbegin; 1665d016bddeSToby Isaac c->sub_rend = rend; 1666d016bddeSToby Isaac c->sub_cbegin = cbegin; 1667d016bddeSToby Isaac c->sub_cend = cend; 1668d016bddeSToby Isaac } 1669d016bddeSToby Isaac c = (Mat_MPIDense *)a->cmat->data; 1670d016bddeSToby Isaac if (c->sub_rbegin != rbegin || c->sub_rend != rend) { 1671d016bddeSToby Isaac PetscCall(PetscLayoutDestroy(&a->cmat->rmap)); 1672d016bddeSToby Isaac PetscCall(PetscLayoutCreate(comm, &a->cmat->rmap)); 1673d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, prend - prbegin)); 1674d016bddeSToby Isaac PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1675d016bddeSToby Isaac PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1676d016bddeSToby Isaac c->sub_rbegin = rbegin; 1677d016bddeSToby Isaac c->sub_rend = rend; 1678d016bddeSToby Isaac } 1679d016bddeSToby Isaac if (c->sub_cbegin != cbegin || c->sub_cend != cend) { 1680d016bddeSToby Isaac // special optimization: check if all columns are owned by rank 0, in which case no communication is necessary 1681d016bddeSToby Isaac if ((cend - cbegin != a->cmat->cmap->N) || (A->cmap->range[1] != A->cmap->N)) { 1682d016bddeSToby Isaac PetscCall(PetscLayoutDestroy(&a->cmat->cmap)); 1683d016bddeSToby Isaac PetscCall(PetscLayoutCreate(comm, &a->cmat->cmap)); 1684d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->cmap, pcend - pcbegin)); 1685d016bddeSToby Isaac PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 1686d016bddeSToby Isaac PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1687d016bddeSToby Isaac PetscCall(VecDestroy(&c->lvec)); 1688d016bddeSToby Isaac PetscCall(PetscSFDestroy(&c->Mvctx)); 1689d016bddeSToby Isaac } 1690d016bddeSToby Isaac c->sub_cbegin = cbegin; 1691d016bddeSToby Isaac c->sub_cend = cend; 1692d016bddeSToby Isaac } 16935f80ce2aSJacob Faibussowitsch PetscCheck(!c->A, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1694d016bddeSToby Isaac PetscCall(MatDenseGetSubMatrix(a->A, prbegin, prend, cbegin, cend, &c->A)); 16953faff063SStefano Zampini 1696616b8fbbSStefano Zampini a->cmat->preallocated = PETSC_TRUE; 1697616b8fbbSStefano Zampini a->cmat->assembled = PETSC_TRUE; 16983faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 16993faff063SStefano Zampini a->cmat->offloadmask = c->A->offloadmask; 17003faff063SStefano Zampini #endif 17015ea7661aSPierre Jolivet a->matinuse = cbegin + 1; 17025ea7661aSPierre Jolivet *v = a->cmat; 17033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 17045ea7661aSPierre Jolivet } 17055ea7661aSPierre Jolivet 170666976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A, Mat *v) 1707d71ae5a4SJacob Faibussowitsch { 17085ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1709616b8fbbSStefano Zampini Mat_MPIDense *c; 17105ea7661aSPierre Jolivet 17115ea7661aSPierre Jolivet PetscFunctionBegin; 17125f80ce2aSJacob Faibussowitsch PetscCheck(a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetSubMatrix() first"); 17135f80ce2aSJacob Faibussowitsch PetscCheck(a->cmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal matrix"); 17145f80ce2aSJacob Faibussowitsch PetscCheck(*v == a->cmat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Not the matrix obtained from MatDenseGetSubMatrix()"); 17155ea7661aSPierre Jolivet a->matinuse = 0; 1716616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 17179566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreSubMatrix(a->A, &c->A)); 1718742765d3SMatthew Knepley if (v) *v = NULL; 17193faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 17203faff063SStefano Zampini A->offloadmask = a->A->offloadmask; 17213faff063SStefano Zampini #endif 17223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 17235ea7661aSPierre Jolivet } 17245ea7661aSPierre Jolivet 1725002bc6daSRichard Tran Mills /*MC 1726002bc6daSRichard Tran Mills MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices. 1727002bc6daSRichard Tran Mills 17282ef1f0ffSBarry Smith Options Database Key: 172911a5261eSBarry Smith . -mat_type mpidense - sets the matrix type to `MATMPIDENSE` during a call to `MatSetFromOptions()` 1730002bc6daSRichard Tran Mills 1731002bc6daSRichard Tran Mills Level: beginner 1732002bc6daSRichard Tran Mills 17331cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreateDense()`, `MATSEQDENSE`, `MATDENSE` 1734002bc6daSRichard Tran Mills M*/ 17354742e46bSJacob Faibussowitsch PetscErrorCode MatCreate_MPIDense(Mat mat) 1736d71ae5a4SJacob Faibussowitsch { 1737273d9f13SBarry Smith Mat_MPIDense *a; 1738273d9f13SBarry Smith 1739273d9f13SBarry Smith PetscFunctionBegin; 17404dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&a)); 1741b0a32e0cSBarry Smith mat->data = (void *)a; 1742aea10558SJacob Faibussowitsch mat->ops[0] = MatOps_Values; 1743273d9f13SBarry Smith 1744273d9f13SBarry Smith mat->insertmode = NOT_SET_VALUES; 1745273d9f13SBarry Smith 1746273d9f13SBarry Smith /* build cache for off array entries formed */ 1747273d9f13SBarry Smith a->donotstash = PETSC_FALSE; 17482205254eSKarl Rupp 17499566063dSJacob Faibussowitsch PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat), 1, &mat->stash)); 1750273d9f13SBarry Smith 1751273d9f13SBarry Smith /* stuff used for matrix vector multiply */ 1752f4259b30SLisandro Dalcin a->lvec = NULL; 1753f4259b30SLisandro Dalcin a->Mvctx = NULL; 1754273d9f13SBarry Smith a->roworiented = PETSC_TRUE; 1755273d9f13SBarry Smith 17569566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", MatDenseGetLDA_MPIDense)); 17579566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", MatDenseSetLDA_MPIDense)); 17589566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", MatDenseGetArray_MPIDense)); 17599566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", MatDenseRestoreArray_MPIDense)); 17609566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", MatDenseGetArrayRead_MPIDense)); 17619566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", MatDenseRestoreArrayRead_MPIDense)); 17629566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", MatDenseGetArrayWrite_MPIDense)); 17639566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", MatDenseRestoreArrayWrite_MPIDense)); 17649566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", MatDensePlaceArray_MPIDense)); 17659566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", MatDenseResetArray_MPIDense)); 17669566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", MatDenseReplaceArray_MPIDense)); 17679566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense)); 17689566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense)); 17699566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense)); 17709566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense)); 17719566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense)); 17729566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense)); 17739566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", MatDenseGetSubMatrix_MPIDense)); 17749566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", MatDenseRestoreSubMatrix_MPIDense)); 17759566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", MatConvert_MPIAIJ_MPIDense)); 17769566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", MatConvert_MPIDense_MPIAIJ)); 17778baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 17789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", MatConvert_MPIDense_Elemental)); 17798baccfbdSHong Zhang #endif 1780d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 17819566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", MatConvert_Dense_ScaLAPACK)); 1782d24d4204SJose E. Roman #endif 1783637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 17849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", MatConvert_MPIDense_MPIDenseCUDA)); 1785637a0070SStefano Zampini #endif 17869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", MatMPIDenseSetPreallocation_MPIDense)); 17879566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 17889566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 17896718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 17909566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 17919566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 17926718818eSStefano Zampini #endif 179347d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 179447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", MatConvert_MPIDense_MPIDenseHIP)); 179547d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 179647d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 179747d993e7Ssuyashtn #endif 17989566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", MatDenseGetColumn_MPIDense)); 17999566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", MatDenseRestoreColumn_MPIDense)); 1800d016bddeSToby Isaac PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultColumnRange_C", MatMultColumnRange_MPIDense)); 18010be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultAddColumnRange_C", MatMultAddColumnRange_MPIDense)); 18020be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeColumnRange_C", MatMultHermitianTransposeColumnRange_MPIDense)); 18030be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeAddColumnRange_C", MatMultHermitianTransposeAddColumnRange_MPIDense)); 18049566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATMPIDENSE)); 18053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1806273d9f13SBarry Smith } 1807273d9f13SBarry Smith 1808209238afSKris Buschelman /*MC 1809002d173eSKris Buschelman MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices. 1810209238afSKris Buschelman 181111a5261eSBarry Smith This matrix type is identical to `MATSEQDENSE` when constructed with a single process communicator, 181211a5261eSBarry Smith and `MATMPIDENSE` otherwise. 1813209238afSKris Buschelman 18142ef1f0ffSBarry Smith Options Database Key: 181511a5261eSBarry Smith . -mat_type dense - sets the matrix type to `MATDENSE` during a call to `MatSetFromOptions()` 1816209238afSKris Buschelman 1817209238afSKris Buschelman Level: beginner 1818209238afSKris Buschelman 18191cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATSEQDENSE`, `MATMPIDENSE`, `MATDENSECUDA`, `MATDENSEHIP` 18206947451fSStefano Zampini M*/ 18216947451fSStefano Zampini 18225d83a8b1SBarry Smith /*@ 1823273d9f13SBarry Smith MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries 1824273d9f13SBarry Smith 18258f490ea3SStefano Zampini Collective 1826273d9f13SBarry Smith 1827273d9f13SBarry Smith Input Parameters: 1828fe59aa6dSJacob Faibussowitsch + B - the matrix 18292ef1f0ffSBarry Smith - data - optional location of matrix data. Set to `NULL` for PETSc 1830273d9f13SBarry Smith to control all matrix memory allocation. 1831273d9f13SBarry Smith 18322ef1f0ffSBarry Smith Level: intermediate 18332ef1f0ffSBarry Smith 1834273d9f13SBarry Smith Notes: 18352ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 1836273d9f13SBarry Smith storage by columns. 1837273d9f13SBarry Smith 1838273d9f13SBarry Smith The data input variable is intended primarily for Fortran programmers 1839273d9f13SBarry Smith who wish to allocate their own matrix memory space. Most users should 18402ef1f0ffSBarry Smith set `data` to `NULL`. 1841273d9f13SBarry Smith 18421cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMPIDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 1843273d9f13SBarry Smith @*/ 1844d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMPIDenseSetPreallocation(Mat B, PetscScalar *data) 1845d71ae5a4SJacob Faibussowitsch { 1846273d9f13SBarry Smith PetscFunctionBegin; 1847d5ea218eSStefano Zampini PetscValidHeaderSpecific(B, MAT_CLASSID, 1); 1848cac4c232SBarry Smith PetscTryMethod(B, "MatMPIDenseSetPreallocation_C", (Mat, PetscScalar *), (B, data)); 18493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1850273d9f13SBarry Smith } 1851273d9f13SBarry Smith 1852d3042a70SBarry Smith /*@ 185311a5261eSBarry Smith MatDensePlaceArray - Allows one to replace the array in a `MATDENSE` matrix with an 1854d3042a70SBarry Smith array provided by the user. This is useful to avoid copying an array 1855d3042a70SBarry Smith into a matrix 1856d3042a70SBarry Smith 1857d3042a70SBarry Smith Not Collective 1858d3042a70SBarry Smith 1859d3042a70SBarry Smith Input Parameters: 1860d3042a70SBarry Smith + mat - the matrix 1861d3042a70SBarry Smith - array - the array in column major order 1862d3042a70SBarry Smith 18632ef1f0ffSBarry Smith Level: developer 18642ef1f0ffSBarry Smith 186511a5261eSBarry Smith Note: 18664d5500e8SJunchao Zhang Adding `const` to `array` was an oversight, see notes in `VecPlaceArray()`. 18674d5500e8SJunchao Zhang 186811a5261eSBarry Smith You can return to the original array with a call to `MatDenseResetArray()`. The user is responsible for freeing this array; it will not be 1869d3042a70SBarry Smith freed when the matrix is destroyed. 1870d3042a70SBarry Smith 18711cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`, 187211a5261eSBarry Smith `MatDenseReplaceArray()` 1873d3042a70SBarry Smith @*/ 1874d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDensePlaceArray(Mat mat, const PetscScalar *array) 1875d71ae5a4SJacob Faibussowitsch { 1876d3042a70SBarry Smith PetscFunctionBegin; 1877d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1878cac4c232SBarry Smith PetscUseMethod(mat, "MatDensePlaceArray_C", (Mat, const PetscScalar *), (mat, array)); 18799566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 188047d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1881637a0070SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1882637a0070SStefano Zampini #endif 18833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1884d3042a70SBarry Smith } 1885d3042a70SBarry Smith 1886d3042a70SBarry Smith /*@ 188711a5261eSBarry Smith MatDenseResetArray - Resets the matrix array to that it previously had before the call to `MatDensePlaceArray()` 1888d3042a70SBarry Smith 1889d3042a70SBarry Smith Not Collective 1890d3042a70SBarry Smith 18912fe279fdSBarry Smith Input Parameter: 1892d3042a70SBarry Smith . mat - the matrix 1893d3042a70SBarry Smith 18942ef1f0ffSBarry Smith Level: developer 18952ef1f0ffSBarry Smith 189611a5261eSBarry Smith Note: 189711a5261eSBarry Smith You can only call this after a call to `MatDensePlaceArray()` 1898d3042a70SBarry Smith 18991cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()` 1900d3042a70SBarry Smith @*/ 1901d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseResetArray(Mat mat) 1902d71ae5a4SJacob Faibussowitsch { 1903d3042a70SBarry Smith PetscFunctionBegin; 1904d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1905cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseResetArray_C", (Mat), (mat)); 19069566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 19073ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1908d3042a70SBarry Smith } 1909d3042a70SBarry Smith 1910d5ea218eSStefano Zampini /*@ 1911d5ea218eSStefano Zampini MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an 1912d5ea218eSStefano Zampini array provided by the user. This is useful to avoid copying an array 1913d5ea218eSStefano Zampini into a matrix 1914d5ea218eSStefano Zampini 1915d5ea218eSStefano Zampini Not Collective 1916d5ea218eSStefano Zampini 1917d5ea218eSStefano Zampini Input Parameters: 1918d5ea218eSStefano Zampini + mat - the matrix 1919d5ea218eSStefano Zampini - array - the array in column major order 1920d5ea218eSStefano Zampini 19212ef1f0ffSBarry Smith Level: developer 19222ef1f0ffSBarry Smith 192311a5261eSBarry Smith Note: 19244d5500e8SJunchao Zhang Adding `const` to `array` was an oversight, see notes in `VecPlaceArray()`. 19254d5500e8SJunchao Zhang 192611a5261eSBarry Smith The memory passed in MUST be obtained with `PetscMalloc()` and CANNOT be 1927d5ea218eSStefano Zampini freed by the user. It will be freed when the matrix is destroyed. 1928d5ea218eSStefano Zampini 19291cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatDensePlaceArray()`, `MatDenseGetArray()`, `VecReplaceArray()` 1930d5ea218eSStefano Zampini @*/ 1931d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseReplaceArray(Mat mat, const PetscScalar *array) 1932d71ae5a4SJacob Faibussowitsch { 1933d5ea218eSStefano Zampini PetscFunctionBegin; 1934d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1935cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseReplaceArray_C", (Mat, const PetscScalar *), (mat, array)); 19369566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 193747d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1938d5ea218eSStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1939d5ea218eSStefano Zampini #endif 19403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1941d5ea218eSStefano Zampini } 1942d5ea218eSStefano Zampini 19435d83a8b1SBarry Smith /*@ 194411a5261eSBarry Smith MatCreateDense - Creates a matrix in `MATDENSE` format. 19458965ea79SLois Curfman McInnes 1946d083f849SBarry Smith Collective 1947db81eaa0SLois Curfman McInnes 19488965ea79SLois Curfman McInnes Input Parameters: 1949db81eaa0SLois Curfman McInnes + comm - MPI communicator 19502ef1f0ffSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if `M` is given) 19512ef1f0ffSBarry Smith . n - number of local columns (or `PETSC_DECIDE` to have calculated if `N` is given) 19522ef1f0ffSBarry Smith . M - number of global rows (or `PETSC_DECIDE` to have calculated if `m` is given) 19532ef1f0ffSBarry Smith . N - number of global columns (or `PETSC_DECIDE` to have calculated if `n` is given) 19542c5cda21SPierre Jolivet - data - optional location of matrix data. Set data to `NULL` (`PETSC_NULL_SCALAR_ARRAY` for Fortran users) for PETSc 1955dfc5480cSLois Curfman McInnes to control all matrix memory allocation. 19568965ea79SLois Curfman McInnes 19578965ea79SLois Curfman McInnes Output Parameter: 1958477f1c0bSLois Curfman McInnes . A - the matrix 19598965ea79SLois Curfman McInnes 19602ef1f0ffSBarry Smith Level: intermediate 19612ef1f0ffSBarry Smith 1962b259b22eSLois Curfman McInnes Notes: 19632ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 196439ddd567SLois Curfman McInnes storage by columns. 196511a5261eSBarry Smith 196611a5261eSBarry Smith Although local portions of the matrix are stored in column-major 1967002bc6daSRichard Tran Mills order, the matrix is partitioned across MPI ranks by row. 19688965ea79SLois Curfman McInnes 196918f449edSLois Curfman McInnes The data input variable is intended primarily for Fortran programmers 197018f449edSLois Curfman McInnes who wish to allocate their own matrix memory space. Most users should 19712c5cda21SPierre Jolivet set `data` to `NULL` (`PETSC_NULL_SCALAR_ARRAY` for Fortran users). 197218f449edSLois Curfman McInnes 19738965ea79SLois Curfman McInnes The user MUST specify either the local or global matrix dimensions 19748965ea79SLois Curfman McInnes (possibly both). 19758965ea79SLois Curfman McInnes 19761cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 19778965ea79SLois Curfman McInnes @*/ 1978ce78bad3SBarry Smith PetscErrorCode MatCreateDense(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar data[], Mat *A) 1979d71ae5a4SJacob Faibussowitsch { 19803a40ed3dSBarry Smith PetscFunctionBegin; 19819566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 19829566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, M, N)); 19836f08ad05SPierre Jolivet PetscCall(MatSetType(*A, MATDENSE)); 19849566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(*A, data)); 19856f08ad05SPierre Jolivet PetscCall(MatMPIDenseSetPreallocation(*A, data)); 19863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19878965ea79SLois Curfman McInnes } 19888965ea79SLois Curfman McInnes 1989d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDuplicate_MPIDense(Mat A, MatDuplicateOption cpvalues, Mat *newmat) 1990d71ae5a4SJacob Faibussowitsch { 19918965ea79SLois Curfman McInnes Mat mat; 19923501a2bdSLois Curfman McInnes Mat_MPIDense *a, *oldmat = (Mat_MPIDense *)A->data; 19938965ea79SLois Curfman McInnes 19943a40ed3dSBarry Smith PetscFunctionBegin; 1995f4259b30SLisandro Dalcin *newmat = NULL; 19969566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat)); 19979566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 19989566063dSJacob Faibussowitsch PetscCall(MatSetType(mat, ((PetscObject)A)->type_name)); 1999834f8fabSBarry Smith a = (Mat_MPIDense *)mat->data; 20005aa7edbeSHong Zhang 2001d5f3da31SBarry Smith mat->factortype = A->factortype; 2002c456f294SBarry Smith mat->assembled = PETSC_TRUE; 2003273d9f13SBarry Smith mat->preallocated = PETSC_TRUE; 20048965ea79SLois Curfman McInnes 2005e0fa3b82SLois Curfman McInnes mat->insertmode = NOT_SET_VALUES; 20063782ba37SSatish Balay a->donotstash = oldmat->donotstash; 2007e04c1aa4SHong Zhang 20089566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->rmap, &mat->rmap)); 20099566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->cmap, &mat->cmap)); 20108965ea79SLois Curfman McInnes 20119566063dSJacob Faibussowitsch PetscCall(MatDuplicate(oldmat->A, cpvalues, &a->A)); 201201b82886SBarry Smith 20138965ea79SLois Curfman McInnes *newmat = mat; 20143ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20158965ea79SLois Curfman McInnes } 20168965ea79SLois Curfman McInnes 201766976f2fSJacob Faibussowitsch static PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer) 2018d71ae5a4SJacob Faibussowitsch { 201987d5ce66SSatish Balay PetscBool isbinary; 202087d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 202187d5ce66SSatish Balay PetscBool ishdf5; 202287d5ce66SSatish Balay #endif 2023eb91f321SVaclav Hapla 2024eb91f321SVaclav Hapla PetscFunctionBegin; 2025eb91f321SVaclav Hapla PetscValidHeaderSpecific(newMat, MAT_CLASSID, 1); 2026eb91f321SVaclav Hapla PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 2027eb91f321SVaclav Hapla /* force binary viewer to load .info file if it has not yet done so */ 20289566063dSJacob Faibussowitsch PetscCall(PetscViewerSetUp(viewer)); 20299566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 203087d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 20319566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERHDF5, &ishdf5)); 203287d5ce66SSatish Balay #endif 2033eb91f321SVaclav Hapla if (isbinary) { 20349566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_Binary(newMat, viewer)); 2035eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5) 203687d5ce66SSatish Balay } else if (ishdf5) { 20379566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_HDF5(newMat, viewer)); 2038eb91f321SVaclav Hapla #endif 203998921bdaSJacob Faibussowitsch } else SETERRQ(PetscObjectComm((PetscObject)newMat), PETSC_ERR_SUP, "Viewer type %s not yet supported for reading %s matrices", ((PetscObject)viewer)->type_name, ((PetscObject)newMat)->type_name); 20403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2041eb91f321SVaclav Hapla } 2042eb91f321SVaclav Hapla 2043d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatEqual_MPIDense(Mat A, Mat B, PetscBool *flag) 2044d71ae5a4SJacob Faibussowitsch { 20456e4ee0c6SHong Zhang Mat_MPIDense *matB = (Mat_MPIDense *)B->data, *matA = (Mat_MPIDense *)A->data; 20466e4ee0c6SHong Zhang Mat a, b; 204790ace30eSBarry Smith 20486e4ee0c6SHong Zhang PetscFunctionBegin; 20496e4ee0c6SHong Zhang a = matA->A; 20506e4ee0c6SHong Zhang b = matB->A; 20512cf15c64SPierre Jolivet PetscCall(MatEqual(a, b, flag)); 2052462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, flag, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 20533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20546e4ee0c6SHong Zhang } 205590ace30eSBarry Smith 205666976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data) 2057d71ae5a4SJacob Faibussowitsch { 20586718818eSStefano Zampini Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data; 2059baa3c1c6SHong Zhang 2060baa3c1c6SHong Zhang PetscFunctionBegin; 20619566063dSJacob Faibussowitsch PetscCall(PetscFree2(atb->sendbuf, atb->recvcounts)); 20629566063dSJacob Faibussowitsch PetscCall(MatDestroy(&atb->atb)); 20639566063dSJacob Faibussowitsch PetscCall(PetscFree(atb)); 20643ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2065baa3c1c6SHong Zhang } 2066baa3c1c6SHong Zhang 206766976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data) 2068d71ae5a4SJacob Faibussowitsch { 20696718818eSStefano Zampini Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data; 2070cc48ffa7SToby Isaac 2071cc48ffa7SToby Isaac PetscFunctionBegin; 20729566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->buf[0], abt->buf[1])); 20739566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->recvcounts, abt->recvdispls)); 20749566063dSJacob Faibussowitsch PetscCall(PetscFree(abt)); 20753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2076cc48ffa7SToby Isaac } 2077cc48ffa7SToby Isaac 2078d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2079d71ae5a4SJacob Faibussowitsch { 2080baa3c1c6SHong Zhang Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 20816718818eSStefano Zampini Mat_TransMatMultDense *atb; 2082cb20be35SHong Zhang MPI_Comm comm; 20836718818eSStefano Zampini PetscMPIInt size, *recvcounts; 20846718818eSStefano Zampini PetscScalar *carray, *sendbuf; 2085637a0070SStefano Zampini const PetscScalar *atbarray; 2086a1f9a5e6SStefano Zampini PetscInt i, cN = C->cmap->N, proc, k, j, lda; 2087e68c0b26SHong Zhang const PetscInt *ranges; 2088cb20be35SHong Zhang 2089cb20be35SHong Zhang PetscFunctionBegin; 20906718818eSStefano Zampini MatCheckProduct(C, 3); 20915f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 20926718818eSStefano Zampini atb = (Mat_TransMatMultDense *)C->product->data; 20936718818eSStefano Zampini recvcounts = atb->recvcounts; 20946718818eSStefano Zampini sendbuf = atb->sendbuf; 20956718818eSStefano Zampini 20969566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 20979566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 2098e68c0b26SHong Zhang 2099c5ef1628SHong Zhang /* compute atbarray = aseq^T * bseq */ 2100fb842aefSJose E. Roman PetscCall(MatTransposeMatMult(a->A, b->A, atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX, PETSC_DETERMINE, &atb->atb)); 2101cb20be35SHong Zhang 21029566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 2103cb20be35SHong Zhang 2104d016bddeSToby Isaac if (ranges[1] == C->rmap->N) { 2105d016bddeSToby Isaac /* all of the values are being reduced to rank 0: optimize this case to use MPI_Reduce and GPU aware MPI if available */ 2106d016bddeSToby Isaac PetscInt atb_lda, c_lda; 2107d016bddeSToby Isaac Mat atb_local = atb->atb; 2108d016bddeSToby Isaac Mat atb_alloc = NULL; 2109d016bddeSToby Isaac Mat c_local = c->A; 2110d016bddeSToby Isaac Mat c_alloc = NULL; 2111d016bddeSToby Isaac PetscMemType atb_memtype, c_memtype; 2112d016bddeSToby Isaac const PetscScalar *atb_array = NULL; 2113d016bddeSToby Isaac MPI_Datatype vector_type; 2114d016bddeSToby Isaac PetscScalar *c_array = NULL; 2115d016bddeSToby Isaac PetscMPIInt rank; 2116d016bddeSToby Isaac 2117d016bddeSToby Isaac PetscCallMPI(MPI_Comm_rank(comm, &rank)); 2118d016bddeSToby Isaac 2119d016bddeSToby Isaac PetscCall(MatDenseGetLDA(atb_local, &atb_lda)); 2120d016bddeSToby Isaac if (atb_lda != C->rmap->N) { 2121d016bddeSToby Isaac // copy atb to a matrix that will have lda == the number of rows 2122d016bddeSToby Isaac PetscCall(MatDuplicate(atb_local, MAT_DO_NOT_COPY_VALUES, &atb_alloc)); 2123d016bddeSToby Isaac PetscCall(MatCopy(atb_local, atb_alloc, DIFFERENT_NONZERO_PATTERN)); 2124d016bddeSToby Isaac atb_local = atb_alloc; 2125d016bddeSToby Isaac } 2126d016bddeSToby Isaac 2127d016bddeSToby Isaac if (rank == 0) { 2128d016bddeSToby Isaac PetscCall(MatDenseGetLDA(c_local, &c_lda)); 2129d016bddeSToby Isaac if (c_lda != C->rmap->N) { 2130d016bddeSToby Isaac // copy c to a matrix that will have lda == the number of rows 2131d016bddeSToby Isaac PetscCall(MatDuplicate(c_local, MAT_DO_NOT_COPY_VALUES, &c_alloc)); 2132d016bddeSToby Isaac c_local = c_alloc; 2133d016bddeSToby Isaac } 2134d016bddeSToby Isaac PetscCall(MatZeroEntries(c_local)); 2135d016bddeSToby Isaac } 2136d016bddeSToby Isaac /* atb_local and c_local have nrows = lda = A->cmap->N and ncols = 2137d016bddeSToby Isaac * B->cmap->N: use the a->Mvctx to use the best reduction method */ 2138d016bddeSToby Isaac if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 2139d016bddeSToby Isaac vector_type = MPIU_SCALAR; 2140d016bddeSToby Isaac if (B->cmap->N > 1) { 2141b682a77bSToby Isaac PetscMPIInt mpi_N; 2142b682a77bSToby Isaac 2143b682a77bSToby Isaac PetscCall(PetscMPIIntCast(B->cmap->N, &mpi_N)); 2144b682a77bSToby Isaac PetscCallMPI(MPI_Type_contiguous(mpi_N, MPIU_SCALAR, &vector_type)); 2145d016bddeSToby Isaac PetscCallMPI(MPI_Type_commit(&vector_type)); 2146d016bddeSToby Isaac } 2147d016bddeSToby Isaac PetscCall(MatDenseGetArrayReadAndMemType(atb_local, &atb_array, &atb_memtype)); 2148d016bddeSToby Isaac PetscCall(MatDenseGetArrayWriteAndMemType(c_local, &c_array, &c_memtype)); 2149d016bddeSToby Isaac PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, vector_type, atb_memtype, atb_array, c_memtype, c_array, MPIU_SUM)); 2150d016bddeSToby Isaac PetscCall(PetscSFReduceEnd(a->Mvctx, vector_type, atb_array, c_array, MPIU_SUM)); 2151d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayWriteAndMemType(c_local, &c_array)); 2152d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayReadAndMemType(atb_local, &atb_array)); 2153d016bddeSToby Isaac if (rank == 0 && c_local != c->A) PetscCall(MatCopy(c_local, c->A, DIFFERENT_NONZERO_PATTERN)); 2154d016bddeSToby Isaac if (B->cmap->N > 1) PetscCallMPI(MPI_Type_free(&vector_type)); 2155d016bddeSToby Isaac PetscCall(MatDestroy(&atb_alloc)); 2156d016bddeSToby Isaac PetscCall(MatDestroy(&c_alloc)); 2157d016bddeSToby Isaac PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 2158d016bddeSToby Isaac PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 2159d016bddeSToby Isaac PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 2160d016bddeSToby Isaac PetscFunctionReturn(PETSC_SUCCESS); 2161d016bddeSToby Isaac } 2162d016bddeSToby Isaac 2163660d5466SHong Zhang /* arrange atbarray into sendbuf */ 21649566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(atb->atb, &atbarray)); 21659566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(atb->atb, &lda)); 2166637a0070SStefano Zampini for (proc = 0, k = 0; proc < size; proc++) { 2167baa3c1c6SHong Zhang for (j = 0; j < cN; j++) { 2168a1f9a5e6SStefano Zampini for (i = ranges[proc]; i < ranges[proc + 1]; i++) sendbuf[k++] = atbarray[i + j * lda]; 2169cb20be35SHong Zhang } 2170cb20be35SHong Zhang } 21719566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(atb->atb, &atbarray)); 2172637a0070SStefano Zampini 2173c5ef1628SHong Zhang /* sum all atbarray to local values of C */ 21749566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &carray)); 21759566063dSJacob Faibussowitsch PetscCallMPI(MPI_Reduce_scatter(sendbuf, carray, recvcounts, MPIU_SCALAR, MPIU_SUM, comm)); 21769566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &carray)); 217767af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 21789566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 21799566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 21803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2181cb20be35SHong Zhang } 2182cb20be35SHong Zhang 2183d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2184d71ae5a4SJacob Faibussowitsch { 2185cb20be35SHong Zhang MPI_Comm comm; 2186baa3c1c6SHong Zhang PetscMPIInt size; 2187660d5466SHong Zhang PetscInt cm = A->cmap->n, cM, cN = B->cmap->N; 2188baa3c1c6SHong Zhang Mat_TransMatMultDense *atb; 218947d993e7Ssuyashtn PetscBool cisdense = PETSC_FALSE; 21900acaeb71SStefano Zampini const PetscInt *ranges; 2191cb20be35SHong Zhang 2192cb20be35SHong Zhang PetscFunctionBegin; 21938f83a4d9SJacob Faibussowitsch MatCheckProduct(C, 4); 21945f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 21959566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 2196cb20be35SHong Zhang if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) { 219798921bdaSJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2198cb20be35SHong Zhang } 2199cb20be35SHong Zhang 22004222ddf1SHong Zhang /* create matrix product C */ 22019566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, cm, B->cmap->n, A->cmap->N, B->cmap->N)); 220247d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 22039566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSECUDA, "")); 220447d993e7Ssuyashtn #endif 220547d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 220647d993e7Ssuyashtn PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSEHIP, "")); 220747d993e7Ssuyashtn #endif 220848a46eb9SPierre Jolivet if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)A)->type_name)); 22099566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2210baa3c1c6SHong Zhang 22114222ddf1SHong Zhang /* create data structure for reuse C */ 22129566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22139566063dSJacob Faibussowitsch PetscCall(PetscNew(&atb)); 22144222ddf1SHong Zhang cM = C->rmap->N; 22159566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(cM * cN, &atb->sendbuf, size, &atb->recvcounts)); 22169566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 22176497c311SBarry Smith for (PetscMPIInt i = 0; i < size; i++) PetscCall(PetscMPIIntCast((ranges[i + 1] - ranges[i]) * cN, &atb->recvcounts[i])); 22186718818eSStefano Zampini C->product->data = atb; 22196718818eSStefano Zampini C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense; 22203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2221cb20be35SHong Zhang } 2222cb20be35SHong Zhang 2223d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2224d71ae5a4SJacob Faibussowitsch { 2225cc48ffa7SToby Isaac MPI_Comm comm; 2226cc48ffa7SToby Isaac PetscMPIInt i, size; 2227cc48ffa7SToby Isaac PetscInt maxRows, bufsiz; 2228cc48ffa7SToby Isaac PetscMPIInt tag; 22294222ddf1SHong Zhang PetscInt alg; 2230cc48ffa7SToby Isaac Mat_MatTransMultDense *abt; 22314222ddf1SHong Zhang Mat_Product *product = C->product; 22324222ddf1SHong Zhang PetscBool flg; 2233cc48ffa7SToby Isaac 2234cc48ffa7SToby Isaac PetscFunctionBegin; 22356718818eSStefano Zampini MatCheckProduct(C, 4); 22365f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 22374222ddf1SHong Zhang /* check local size of A and B */ 22385f80ce2aSJacob Faibussowitsch PetscCheck(A->cmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")", A->cmap->n, B->cmap->n); 2239cc48ffa7SToby Isaac 22409566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "allgatherv", &flg)); 2241637a0070SStefano Zampini alg = flg ? 0 : 1; 2242cc48ffa7SToby Isaac 22434222ddf1SHong Zhang /* setup matrix product C */ 22449566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, A->rmap->n, B->rmap->n, A->rmap->N, B->rmap->N)); 22459566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATMPIDENSE)); 22469566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 22479566063dSJacob Faibussowitsch PetscCall(PetscObjectGetNewTag((PetscObject)C, &tag)); 22484222ddf1SHong Zhang 22494222ddf1SHong Zhang /* create data structure for reuse C */ 22509566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 22519566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22529566063dSJacob Faibussowitsch PetscCall(PetscNew(&abt)); 2253cc48ffa7SToby Isaac abt->tag = tag; 2254faa55883SToby Isaac abt->alg = alg; 2255faa55883SToby Isaac switch (alg) { 22564222ddf1SHong Zhang case 1: /* alg: "cyclic" */ 225757508eceSPierre Jolivet for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, B->rmap->range[i + 1] - B->rmap->range[i]); 2258cc48ffa7SToby Isaac bufsiz = A->cmap->N * maxRows; 2259f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(bufsiz, &abt->buf[0], bufsiz, &abt->buf[1])); 2260faa55883SToby Isaac break; 22614222ddf1SHong Zhang default: /* alg: "allgatherv" */ 2262f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &abt->buf[0], B->rmap->N * B->cmap->N, &abt->buf[1])); 2263f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(size, &abt->recvcounts, size + 1, &abt->recvdispls)); 22646497c311SBarry Smith for (i = 0; i <= size; i++) PetscCall(PetscMPIIntCast(B->rmap->range[i] * A->cmap->N, &abt->recvdispls[i])); 22656497c311SBarry Smith for (i = 0; i < size; i++) PetscCall(PetscMPIIntCast(abt->recvdispls[i + 1] - abt->recvdispls[i], &abt->recvcounts[i])); 2266faa55883SToby Isaac break; 2267faa55883SToby Isaac } 2268cc48ffa7SToby Isaac 22696718818eSStefano Zampini C->product->data = abt; 22706718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense; 22714222ddf1SHong Zhang C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense; 22723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2273cc48ffa7SToby Isaac } 2274cc48ffa7SToby Isaac 2275d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C) 2276d71ae5a4SJacob Faibussowitsch { 2277cc48ffa7SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 22786718818eSStefano Zampini Mat_MatTransMultDense *abt; 2279cc48ffa7SToby Isaac MPI_Comm comm; 22806497c311SBarry Smith PetscMPIInt rank, size, sendto, recvfrom, recvisfrom; 2281f4259b30SLisandro Dalcin PetscScalar *sendbuf, *recvbuf = NULL, *cv; 22826497c311SBarry Smith PetscInt i, cK = A->cmap->N, sendsiz, recvsiz, k, j, bn; 2283cc48ffa7SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2284637a0070SStefano Zampini const PetscScalar *av, *bv; 228523fff9afSBarry Smith PetscBLASInt cm, cn, ck, alda, blda = 0, clda; 2286cc48ffa7SToby Isaac MPI_Request reqs[2]; 2287cc48ffa7SToby Isaac const PetscInt *ranges; 2288cc48ffa7SToby Isaac 2289cc48ffa7SToby Isaac PetscFunctionBegin; 22906718818eSStefano Zampini MatCheckProduct(C, 3); 22915f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 22926718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 22939566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 22949566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 22959566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22969566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 22979566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 22989566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 22999566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 23009566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 23019566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &i)); 23029566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &blda)); 23039566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 23049566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 23059566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(B, &ranges)); 2306cc48ffa7SToby Isaac bn = B->rmap->n; 2307637a0070SStefano Zampini if (blda == bn) { 2308637a0070SStefano Zampini sendbuf = (PetscScalar *)bv; 2309cc48ffa7SToby Isaac } else { 2310cc48ffa7SToby Isaac sendbuf = abt->buf[0]; 2311cc48ffa7SToby Isaac for (k = 0, i = 0; i < cK; i++) { 2312ad540459SPierre Jolivet for (j = 0; j < bn; j++, k++) sendbuf[k] = bv[i * blda + j]; 2313cc48ffa7SToby Isaac } 2314cc48ffa7SToby Isaac } 2315cc48ffa7SToby Isaac if (size > 1) { 2316cc48ffa7SToby Isaac sendto = (rank + size - 1) % size; 2317cc48ffa7SToby Isaac recvfrom = (rank + size + 1) % size; 2318cc48ffa7SToby Isaac } else { 2319cc48ffa7SToby Isaac sendto = recvfrom = 0; 2320cc48ffa7SToby Isaac } 23219566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 23229566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 2323cc48ffa7SToby Isaac recvisfrom = rank; 2324cc48ffa7SToby Isaac for (i = 0; i < size; i++) { 2325cc48ffa7SToby Isaac /* we have finished receiving in sending, bufs can be read/modified */ 23266497c311SBarry Smith PetscMPIInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */ 2327cc48ffa7SToby Isaac PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom]; 2328cc48ffa7SToby Isaac 2329cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2330cc48ffa7SToby Isaac /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */ 2331cc48ffa7SToby Isaac sendsiz = cK * bn; 2332cc48ffa7SToby Isaac recvsiz = cK * nextbn; 2333cc48ffa7SToby Isaac recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1]; 23346497c311SBarry Smith PetscCallMPI(MPIU_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0])); 23356497c311SBarry Smith PetscCallMPI(MPIU_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1])); 2336cc48ffa7SToby Isaac } 2337cc48ffa7SToby Isaac 2338cc48ffa7SToby Isaac /* local aseq * sendbuf^T */ 23399566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn)); 2340792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "T", &cm, &cn, &ck, &_DOne, av, &alda, sendbuf, &cn, &_DZero, cv + clda * ranges[recvisfrom], &clda)); 2341cc48ffa7SToby Isaac 2342cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2343cc48ffa7SToby Isaac /* wait for the sends and receives to complete, swap sendbuf and recvbuf */ 23449566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE)); 2345cc48ffa7SToby Isaac } 2346cc48ffa7SToby Isaac bn = nextbn; 2347cc48ffa7SToby Isaac recvisfrom = nextrecvisfrom; 2348cc48ffa7SToby Isaac sendbuf = recvbuf; 2349cc48ffa7SToby Isaac } 23509566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 23519566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 23529566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 235367af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 23549566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 23559566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 23563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2357cc48ffa7SToby Isaac } 2358cc48ffa7SToby Isaac 2359d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C) 2360d71ae5a4SJacob Faibussowitsch { 2361faa55883SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 23626718818eSStefano Zampini Mat_MatTransMultDense *abt; 2363faa55883SToby Isaac MPI_Comm comm; 23646497c311SBarry Smith PetscMPIInt size, ibn; 2365637a0070SStefano Zampini PetscScalar *cv, *sendbuf, *recvbuf; 2366637a0070SStefano Zampini const PetscScalar *av, *bv; 2367637a0070SStefano Zampini PetscInt blda, i, cK = A->cmap->N, k, j, bn; 2368faa55883SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2369637a0070SStefano Zampini PetscBLASInt cm, cn, ck, alda, clda; 2370faa55883SToby Isaac 2371faa55883SToby Isaac PetscFunctionBegin; 23726718818eSStefano Zampini MatCheckProduct(C, 3); 23735f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 23746718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 23759566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 23769566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 23779566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 23789566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 23799566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 23809566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 23819566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 23829566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &blda)); 23839566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 23849566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 2385faa55883SToby Isaac /* copy transpose of B into buf[0] */ 2386faa55883SToby Isaac bn = B->rmap->n; 2387faa55883SToby Isaac sendbuf = abt->buf[0]; 2388faa55883SToby Isaac recvbuf = abt->buf[1]; 2389faa55883SToby Isaac for (k = 0, j = 0; j < bn; j++) { 2390ad540459SPierre Jolivet for (i = 0; i < cK; i++, k++) sendbuf[k] = bv[i * blda + j]; 2391faa55883SToby Isaac } 23929566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 23936497c311SBarry Smith PetscCall(PetscMPIIntCast(bn * cK, &ibn)); 23946497c311SBarry Smith PetscCallMPI(MPI_Allgatherv(sendbuf, ibn, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm)); 23959566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 23969566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 23979566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->cmap->n, &cn)); 2398792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "N", &cm, &cn, &ck, &_DOne, av, &alda, recvbuf, &ck, &_DZero, cv, &clda)); 23999566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 24009566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 24019566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 240267af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 24039566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 24049566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 24053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2406faa55883SToby Isaac } 2407faa55883SToby Isaac 2408d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2409d71ae5a4SJacob Faibussowitsch { 24106718818eSStefano Zampini Mat_MatTransMultDense *abt; 2411faa55883SToby Isaac 2412faa55883SToby Isaac PetscFunctionBegin; 24136718818eSStefano Zampini MatCheckProduct(C, 3); 24145f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 24156718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 2416faa55883SToby Isaac switch (abt->alg) { 2417d71ae5a4SJacob Faibussowitsch case 1: 2418d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C)); 2419d71ae5a4SJacob Faibussowitsch break; 2420d71ae5a4SJacob Faibussowitsch default: 2421d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C)); 2422d71ae5a4SJacob Faibussowitsch break; 2423faa55883SToby Isaac } 24243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2425faa55883SToby Isaac } 2426faa55883SToby Isaac 242766976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data) 2428d71ae5a4SJacob Faibussowitsch { 24296718818eSStefano Zampini Mat_MatMultDense *ab = (Mat_MatMultDense *)data; 2430320f2790SHong Zhang 2431320f2790SHong Zhang PetscFunctionBegin; 24329566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ce)); 24339566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ae)); 24349566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Be)); 24359566063dSJacob Faibussowitsch PetscCall(PetscFree(ab)); 24363ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2437320f2790SHong Zhang } 2438320f2790SHong Zhang 24395d8c7819SPierre Jolivet static PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2440d71ae5a4SJacob Faibussowitsch { 24416718818eSStefano Zampini Mat_MatMultDense *ab; 24425d8c7819SPierre Jolivet Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 2443d016bddeSToby Isaac Mat_MPIDense *b = (Mat_MPIDense *)B->data; 2444320f2790SHong Zhang 2445320f2790SHong Zhang PetscFunctionBegin; 24466718818eSStefano Zampini MatCheckProduct(C, 3); 24475f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Missing product data"); 24486718818eSStefano Zampini ab = (Mat_MatMultDense *)C->product->data; 24495d8c7819SPierre Jolivet if (ab->Ae && ab->Ce) { 24505d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 24519566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(A, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Ae)); 24529566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(B, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Be)); 24539566063dSJacob Faibussowitsch PetscCall(MatMatMultNumeric_Elemental(ab->Ae, ab->Be, ab->Ce)); 24549566063dSJacob Faibussowitsch PetscCall(MatConvert(ab->Ce, MATMPIDENSE, MAT_REUSE_MATRIX, &C)); 24555d8c7819SPierre Jolivet #else 24565d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 24575d8c7819SPierre Jolivet #endif 24585d8c7819SPierre Jolivet } else { 2459d016bddeSToby Isaac MPI_Comm comm; 24605d8c7819SPierre Jolivet const PetscScalar *read; 24615d8c7819SPierre Jolivet PetscScalar *write; 24625d8c7819SPierre Jolivet PetscInt lda; 2463d016bddeSToby Isaac const PetscInt *ranges; 2464d016bddeSToby Isaac PetscMPIInt size; 24655d8c7819SPierre Jolivet 2466d016bddeSToby Isaac if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); /* cannot be done during the symbolic phase because of possible calls to MatProductReplaceMats() */ 2467d016bddeSToby Isaac comm = PetscObjectComm((PetscObject)B); 2468d016bddeSToby Isaac PetscCallMPI(MPI_Comm_size(comm, &size)); 2469d016bddeSToby Isaac PetscCall(PetscLayoutGetRanges(B->rmap, &ranges)); 2470d016bddeSToby Isaac if (ranges[1] == ranges[size]) { 2471d016bddeSToby Isaac // optimize for the case where the B matrix is broadcast from rank 0 2472d016bddeSToby Isaac PetscInt b_lda, be_lda; 2473d016bddeSToby Isaac Mat b_local = b->A; 2474d016bddeSToby Isaac Mat b_alloc = NULL; 2475d016bddeSToby Isaac Mat be_local = ab->Be; 2476d016bddeSToby Isaac Mat be_alloc = NULL; 2477d016bddeSToby Isaac PetscMemType b_memtype, be_memtype; 2478d016bddeSToby Isaac const PetscScalar *b_array = NULL; 2479d016bddeSToby Isaac MPI_Datatype vector_type; 2480d016bddeSToby Isaac PetscScalar *be_array = NULL; 2481d016bddeSToby Isaac PetscMPIInt rank; 2482d016bddeSToby Isaac 2483d016bddeSToby Isaac PetscCallMPI(MPI_Comm_rank(comm, &rank)); 2484d016bddeSToby Isaac PetscCall(MatDenseGetLDA(be_local, &be_lda)); 2485d016bddeSToby Isaac if (be_lda != B->rmap->N) { 2486d016bddeSToby Isaac PetscCall(MatDuplicate(be_local, MAT_DO_NOT_COPY_VALUES, &be_alloc)); 2487d016bddeSToby Isaac be_local = be_alloc; 2488d016bddeSToby Isaac } 2489d016bddeSToby Isaac 2490d016bddeSToby Isaac if (rank == 0) { 2491d016bddeSToby Isaac PetscCall(MatDenseGetLDA(b_local, &b_lda)); 2492d016bddeSToby Isaac if (b_lda != B->rmap->N) { 2493d016bddeSToby Isaac PetscCall(MatDuplicate(b_local, MAT_DO_NOT_COPY_VALUES, &b_alloc)); 2494d016bddeSToby Isaac PetscCall(MatCopy(b_local, b_alloc, DIFFERENT_NONZERO_PATTERN)); 2495d016bddeSToby Isaac b_local = b_alloc; 2496d016bddeSToby Isaac } 2497d016bddeSToby Isaac } 2498b682a77bSToby Isaac vector_type = MPIU_SCALAR; 2499b682a77bSToby Isaac if (B->cmap->N > 1) { 2500b682a77bSToby Isaac PetscMPIInt mpi_N; 2501b682a77bSToby Isaac 2502b682a77bSToby Isaac PetscCall(PetscMPIIntCast(B->cmap->N, &mpi_N)); 2503b682a77bSToby Isaac PetscCallMPI(MPI_Type_contiguous(mpi_N, MPIU_SCALAR, &vector_type)); 2504d016bddeSToby Isaac PetscCallMPI(MPI_Type_commit(&vector_type)); 2505b682a77bSToby Isaac } 2506d016bddeSToby Isaac PetscCall(MatDenseGetArrayReadAndMemType(b_local, &b_array, &b_memtype)); 2507d016bddeSToby Isaac PetscCall(MatDenseGetArrayWriteAndMemType(be_local, &be_array, &be_memtype)); 2508d016bddeSToby Isaac PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, vector_type, b_memtype, b_array, be_memtype, be_array, MPI_REPLACE)); 2509d016bddeSToby Isaac PetscCall(PetscSFBcastEnd(mdn->Mvctx, vector_type, b_array, be_array, MPI_REPLACE)); 2510d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayWriteAndMemType(be_local, &be_array)); 2511d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayReadAndMemType(b_local, &b_array)); 2512d016bddeSToby Isaac if (be_local != ab->Be) PetscCall(MatCopy(be_local, ab->Be, DIFFERENT_NONZERO_PATTERN)); 2513b682a77bSToby Isaac if (B->cmap->N > 1) PetscCallMPI(MPI_Type_free(&vector_type)); 2514d016bddeSToby Isaac PetscCall(MatDestroy(&be_alloc)); 2515d016bddeSToby Isaac PetscCall(MatDestroy(&b_alloc)); 2516d016bddeSToby Isaac } else { 25175d8c7819SPierre Jolivet PetscCall(MatDenseGetLDA(B, &lda)); 25185d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayRead(B, &read)); 25195d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayWrite(ab->Be, &write)); 25205d8c7819SPierre Jolivet for (PetscInt i = 0; i < C->cmap->N; ++i) { 25215d8c7819SPierre Jolivet PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 25225d8c7819SPierre Jolivet PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 25235d8c7819SPierre Jolivet } 25245d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayWrite(ab->Be, &write)); 25255d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(B, &read)); 2526d016bddeSToby Isaac } 2527f4f49eeaSPierre Jolivet PetscCall(MatMatMultNumeric_SeqDense_SeqDense(((Mat_MPIDense *)A->data)->A, ab->Be, ((Mat_MPIDense *)C->data)->A)); 25285d8c7819SPierre Jolivet } 25293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2530320f2790SHong Zhang } 2531320f2790SHong Zhang 2532d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2533d71ae5a4SJacob Faibussowitsch { 25345d8c7819SPierre Jolivet Mat_Product *product = C->product; 25355d8c7819SPierre Jolivet PetscInt alg; 2536320f2790SHong Zhang Mat_MatMultDense *ab; 25375d8c7819SPierre Jolivet PetscBool flg; 2538320f2790SHong Zhang 2539320f2790SHong Zhang PetscFunctionBegin; 25406718818eSStefano Zampini MatCheckProduct(C, 4); 25415f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 25424222ddf1SHong Zhang /* check local size of A and B */ 25435d8c7819SPierre Jolivet PetscCheck(A->cmap->rstart == B->rmap->rstart && A->cmap->rend == B->rmap->rend, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ", %" PetscInt_FMT ")", 25445d8c7819SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2545320f2790SHong Zhang 25465d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "petsc", &flg)); 25475d8c7819SPierre Jolivet alg = flg ? 0 : 1; 25484222ddf1SHong Zhang 25494222ddf1SHong Zhang /* setup C */ 25505d8c7819SPierre Jolivet PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, A->rmap->N, B->cmap->N)); 25515d8c7819SPierre Jolivet PetscCall(MatSetType(C, MATMPIDENSE)); 25529566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2553320f2790SHong Zhang 2554320f2790SHong Zhang /* create data structure for reuse Cdense */ 25559566063dSJacob Faibussowitsch PetscCall(PetscNew(&ab)); 25565d8c7819SPierre Jolivet 25575d8c7819SPierre Jolivet switch (alg) { 25585d8c7819SPierre Jolivet case 1: /* alg: "elemental" */ 25595d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 25605d8c7819SPierre Jolivet /* create elemental matrices Ae and Be */ 25615d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &ab->Ae)); 25625d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Ae, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 25635d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Ae, MATELEMENTAL)); 25645d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Ae)); 25655d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Ae, MAT_ROW_ORIENTED, PETSC_FALSE)); 25665d8c7819SPierre Jolivet 25675d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &ab->Be)); 25685d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Be, PETSC_DECIDE, PETSC_DECIDE, B->rmap->N, B->cmap->N)); 25695d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Be, MATELEMENTAL)); 25705d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Be)); 25715d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Be, MAT_ROW_ORIENTED, PETSC_FALSE)); 25725d8c7819SPierre Jolivet 25735d8c7819SPierre Jolivet /* compute symbolic Ce = Ae*Be */ 25745d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)C), &ab->Ce)); 25755d8c7819SPierre Jolivet PetscCall(MatMatMultSymbolic_Elemental(ab->Ae, ab->Be, fill, ab->Ce)); 25765d8c7819SPierre Jolivet #else 25775d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 25785d8c7819SPierre Jolivet #endif 25795d8c7819SPierre Jolivet break; 25805d8c7819SPierre Jolivet default: /* alg: "petsc" */ 25815d8c7819SPierre Jolivet ab->Ae = NULL; 25825d8c7819SPierre Jolivet PetscCall(MatCreateSeqDense(PETSC_COMM_SELF, A->cmap->N, B->cmap->N, NULL, &ab->Be)); 25835d8c7819SPierre Jolivet ab->Ce = NULL; 25845d8c7819SPierre Jolivet break; 25855d8c7819SPierre Jolivet } 25866718818eSStefano Zampini 25876718818eSStefano Zampini C->product->data = ab; 25886718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense; 25894222ddf1SHong Zhang C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense; 25903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2591320f2790SHong Zhang } 25922ef1f0ffSBarry Smith 2593d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C) 2594d71ae5a4SJacob Faibussowitsch { 25955d8c7819SPierre Jolivet Mat_Product *product = C->product; 25965d8c7819SPierre Jolivet const char *algTypes[2] = {"petsc", "elemental"}; 25975d8c7819SPierre Jolivet PetscInt alg, nalg = PetscDefined(HAVE_ELEMENTAL) ? 2 : 1; 25985d8c7819SPierre Jolivet PetscBool flg = PETSC_FALSE; 25995d8c7819SPierre Jolivet 26004d86920dSPierre Jolivet PetscFunctionBegin; 26015d8c7819SPierre Jolivet /* Set default algorithm */ 2602f0b74427SPierre Jolivet alg = 0; /* default is PETSc */ 26035d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "default", &flg)); 2604835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26055d8c7819SPierre Jolivet 26065d8c7819SPierre Jolivet /* Get runtime option */ 26075d8c7819SPierre Jolivet PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_AB", "Mat"); 26085d8c7819SPierre Jolivet PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_AB", algTypes, nalg, algTypes[alg], &alg, &flg)); 26095d8c7819SPierre Jolivet PetscOptionsEnd(); 2610835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26115d8c7819SPierre Jolivet 26124222ddf1SHong Zhang C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense; 26134222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_AB; 26143ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2615320f2790SHong Zhang } 261686aefd0dSHong Zhang 2617d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C) 2618d71ae5a4SJacob Faibussowitsch { 26194222ddf1SHong Zhang Mat_Product *product = C->product; 26204222ddf1SHong Zhang Mat A = product->A, B = product->B; 26214222ddf1SHong Zhang 26224222ddf1SHong Zhang PetscFunctionBegin; 262307e90273SPierre Jolivet PetscCheck(A->rmap->rstart == B->rmap->rstart && A->rmap->rend == B->rmap->rend, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")", 262407e90273SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 26256718818eSStefano Zampini C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense; 26266718818eSStefano Zampini C->ops->productsymbolic = MatProductSymbolic_AtB; 26273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26284222ddf1SHong Zhang } 26294222ddf1SHong Zhang 2630d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C) 2631d71ae5a4SJacob Faibussowitsch { 26324222ddf1SHong Zhang Mat_Product *product = C->product; 26334222ddf1SHong Zhang const char *algTypes[2] = {"allgatherv", "cyclic"}; 26344222ddf1SHong Zhang PetscInt alg, nalg = 2; 26354222ddf1SHong Zhang PetscBool flg = PETSC_FALSE; 26364222ddf1SHong Zhang 26374222ddf1SHong Zhang PetscFunctionBegin; 26384222ddf1SHong Zhang /* Set default algorithm */ 26394222ddf1SHong Zhang alg = 0; /* default is allgatherv */ 26409566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "default", &flg)); 2641835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26424222ddf1SHong Zhang 26434222ddf1SHong Zhang /* Get runtime option */ 26444222ddf1SHong Zhang if (product->api_user) { 2645d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatMatTransposeMult", "Mat"); 26469566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via", "Algorithmic approach", "MatMatTransposeMult", algTypes, nalg, algTypes[alg], &alg, &flg)); 2647d0609cedSBarry Smith PetscOptionsEnd(); 26484222ddf1SHong Zhang } else { 2649d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_ABt", "Mat"); 26509566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_ABt", algTypes, nalg, algTypes[alg], &alg, &flg)); 2651d0609cedSBarry Smith PetscOptionsEnd(); 26524222ddf1SHong Zhang } 2653835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26544222ddf1SHong Zhang 26554222ddf1SHong Zhang C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense; 26564222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_ABt; 26573ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26584222ddf1SHong Zhang } 26594222ddf1SHong Zhang 26605d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C) 2661d71ae5a4SJacob Faibussowitsch { 26624222ddf1SHong Zhang Mat_Product *product = C->product; 26634222ddf1SHong Zhang 26644222ddf1SHong Zhang PetscFunctionBegin; 26654222ddf1SHong Zhang switch (product->type) { 2666d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AB: 2667d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AB(C)); 2668d71ae5a4SJacob Faibussowitsch break; 2669d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AtB: 2670d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AtB(C)); 2671d71ae5a4SJacob Faibussowitsch break; 2672d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABt: 2673d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_ABt(C)); 2674d71ae5a4SJacob Faibussowitsch break; 2675d71ae5a4SJacob Faibussowitsch default: 2676d71ae5a4SJacob Faibussowitsch break; 26774222ddf1SHong Zhang } 26783ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26794222ddf1SHong Zhang } 2680