xref: /petsc/src/mat/impls/dense/mpi/mpidense.c (revision ad227fea26420e7a31ef041a9fa1418814d171a8)
1be1d678aSKris Buschelman 
2ed3cc1f0SBarry Smith /*
3ed3cc1f0SBarry Smith    Basic functions for basic parallel dense matrices.
4ed3cc1f0SBarry Smith */
5ed3cc1f0SBarry Smith 
6c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h>    /*I   "petscmat.h"  I*/
78949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h>
8baa3c1c6SHong Zhang #include <petscblaslapack.h>
98965ea79SLois Curfman McInnes 
10ab92ecdeSBarry Smith /*@
11ab92ecdeSBarry Smith 
12ab92ecdeSBarry Smith       MatDenseGetLocalMatrix - For a MATMPIDENSE or MATSEQDENSE matrix returns the sequential
13ab92ecdeSBarry Smith               matrix that represents the operator. For sequential matrices it returns itself.
14ab92ecdeSBarry Smith 
15ab92ecdeSBarry Smith     Input Parameter:
16ab92ecdeSBarry Smith .      A - the Seq or MPI dense matrix
17ab92ecdeSBarry Smith 
18ab92ecdeSBarry Smith     Output Parameter:
19ab92ecdeSBarry Smith .      B - the inner matrix
20ab92ecdeSBarry Smith 
218e6c10adSSatish Balay     Level: intermediate
228e6c10adSSatish Balay 
23ab92ecdeSBarry Smith @*/
24ab92ecdeSBarry Smith PetscErrorCode MatDenseGetLocalMatrix(Mat A,Mat *B)
25ab92ecdeSBarry Smith {
26ab92ecdeSBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
27ab92ecdeSBarry Smith   PetscErrorCode ierr;
28ace3abfcSBarry Smith   PetscBool      flg;
29ab92ecdeSBarry Smith 
30ab92ecdeSBarry Smith   PetscFunctionBegin;
31d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
32d5ea218eSStefano Zampini   PetscValidPointer(B,2);
33f140bc17SStefano Zampini   ierr = PetscObjectBaseTypeCompare((PetscObject)A,MATMPIDENSE,&flg);CHKERRQ(ierr);
342205254eSKarl Rupp   if (flg) *B = mat->A;
35f140bc17SStefano Zampini   else {
36f140bc17SStefano Zampini     ierr = PetscObjectBaseTypeCompare((PetscObject)A,MATSEQDENSE,&flg);CHKERRQ(ierr);
37f140bc17SStefano Zampini     if (!flg) SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Not for matrix type %s",((PetscObject)A)->type_name);
38f140bc17SStefano Zampini     *B = A;
39f140bc17SStefano Zampini   }
40ab92ecdeSBarry Smith   PetscFunctionReturn(0);
41ab92ecdeSBarry Smith }
42ab92ecdeSBarry Smith 
43a76f77c3SStefano Zampini PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s)
44a76f77c3SStefano Zampini {
45a76f77c3SStefano Zampini   Mat_MPIDense   *Amat = (Mat_MPIDense*)A->data;
46a76f77c3SStefano Zampini   Mat_MPIDense   *Bmat = (Mat_MPIDense*)B->data;
47a76f77c3SStefano Zampini   PetscErrorCode ierr;
48a76f77c3SStefano Zampini 
49a76f77c3SStefano Zampini   PetscFunctionBegin;
50a76f77c3SStefano Zampini   ierr = MatCopy(Amat->A,Bmat->A,s);CHKERRQ(ierr);
51a76f77c3SStefano Zampini   PetscFunctionReturn(0);
52a76f77c3SStefano Zampini }
53a76f77c3SStefano Zampini 
54ba8c8a56SBarry Smith PetscErrorCode MatGetRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
55ba8c8a56SBarry Smith {
56ba8c8a56SBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
57ba8c8a56SBarry Smith   PetscErrorCode ierr;
58d0f46423SBarry Smith   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
59ba8c8a56SBarry Smith 
60ba8c8a56SBarry Smith   PetscFunctionBegin;
61e7e72b3dSBarry Smith   if (row < rstart || row >= rend) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
62ba8c8a56SBarry Smith   lrow = row - rstart;
63ba8c8a56SBarry Smith   ierr = MatGetRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v);CHKERRQ(ierr);
64ba8c8a56SBarry Smith   PetscFunctionReturn(0);
65ba8c8a56SBarry Smith }
66ba8c8a56SBarry Smith 
67637a0070SStefano Zampini PetscErrorCode MatRestoreRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
68ba8c8a56SBarry Smith {
69637a0070SStefano Zampini   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
70ba8c8a56SBarry Smith   PetscErrorCode ierr;
71637a0070SStefano Zampini   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
72ba8c8a56SBarry Smith 
73ba8c8a56SBarry Smith   PetscFunctionBegin;
74637a0070SStefano Zampini   if (row < rstart || row >= rend) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
75637a0070SStefano Zampini   lrow = row - rstart;
76637a0070SStefano Zampini   ierr = MatRestoreRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v);CHKERRQ(ierr);
77ba8c8a56SBarry Smith   PetscFunctionReturn(0);
78ba8c8a56SBarry Smith }
79ba8c8a56SBarry Smith 
8011bd1e4dSLisandro Dalcin PetscErrorCode  MatGetDiagonalBlock_MPIDense(Mat A,Mat *a)
810de54da6SSatish Balay {
820de54da6SSatish Balay   Mat_MPIDense   *mdn = (Mat_MPIDense*)A->data;
836849ba73SBarry Smith   PetscErrorCode ierr;
84d0f46423SBarry Smith   PetscInt       m = A->rmap->n,rstart = A->rmap->rstart;
8587828ca2SBarry Smith   PetscScalar    *array;
860de54da6SSatish Balay   MPI_Comm       comm;
874b6ae80fSStefano Zampini   PetscBool      flg;
8811bd1e4dSLisandro Dalcin   Mat            B;
890de54da6SSatish Balay 
900de54da6SSatish Balay   PetscFunctionBegin;
914b6ae80fSStefano Zampini   ierr = MatHasCongruentLayouts(A,&flg);CHKERRQ(ierr);
924b6ae80fSStefano Zampini   if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only square matrices supported.");
9311bd1e4dSLisandro Dalcin   ierr = PetscObjectQuery((PetscObject)A,"DiagonalBlock",(PetscObject*)&B);CHKERRQ(ierr);
94616b8fbbSStefano Zampini   if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */
954b6ae80fSStefano Zampini 
964b6ae80fSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)mdn->A,MATSEQDENSECUDA,&flg);CHKERRQ(ierr);
974b6ae80fSStefano Zampini     if (flg) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature",MATSEQDENSECUDA);
980de54da6SSatish Balay     ierr = PetscObjectGetComm((PetscObject)(mdn->A),&comm);CHKERRQ(ierr);
9911bd1e4dSLisandro Dalcin     ierr = MatCreate(comm,&B);CHKERRQ(ierr);
10011bd1e4dSLisandro Dalcin     ierr = MatSetSizes(B,m,m,m,m);CHKERRQ(ierr);
10111bd1e4dSLisandro Dalcin     ierr = MatSetType(B,((PetscObject)mdn->A)->type_name);CHKERRQ(ierr);
1024b6ae80fSStefano Zampini     ierr = MatDenseGetArrayRead(mdn->A,(const PetscScalar**)&array);CHKERRQ(ierr);
10311bd1e4dSLisandro Dalcin     ierr = MatSeqDenseSetPreallocation(B,array+m*rstart);CHKERRQ(ierr);
1044b6ae80fSStefano Zampini     ierr = MatDenseRestoreArrayRead(mdn->A,(const PetscScalar**)&array);CHKERRQ(ierr);
10511bd1e4dSLisandro Dalcin     ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
10611bd1e4dSLisandro Dalcin     ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
10711bd1e4dSLisandro Dalcin     ierr = PetscObjectCompose((PetscObject)A,"DiagonalBlock",(PetscObject)B);CHKERRQ(ierr);
10811bd1e4dSLisandro Dalcin     *a   = B;
10911bd1e4dSLisandro Dalcin     ierr = MatDestroy(&B);CHKERRQ(ierr);
1102205254eSKarl Rupp   } else *a = B;
1110de54da6SSatish Balay   PetscFunctionReturn(0);
1120de54da6SSatish Balay }
1130de54da6SSatish Balay 
11413f74950SBarry Smith PetscErrorCode MatSetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],const PetscScalar v[],InsertMode addv)
1158965ea79SLois Curfman McInnes {
11639b7565bSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)mat->data;
117dfbe8321SBarry Smith   PetscErrorCode ierr;
118d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
119ace3abfcSBarry Smith   PetscBool      roworiented = A->roworiented;
1208965ea79SLois Curfman McInnes 
1213a40ed3dSBarry Smith   PetscFunctionBegin;
1228965ea79SLois Curfman McInnes   for (i=0; i<m; i++) {
1235ef9f2a5SBarry Smith     if (idxm[i] < 0) continue;
124e32f2f54SBarry Smith     if (idxm[i] >= mat->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
1258965ea79SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
1268965ea79SLois Curfman McInnes       row = idxm[i] - rstart;
12739b7565bSBarry Smith       if (roworiented) {
12839b7565bSBarry Smith         ierr = MatSetValues(A->A,1,&row,n,idxn,v+i*n,addv);CHKERRQ(ierr);
1293a40ed3dSBarry Smith       } else {
1308965ea79SLois Curfman McInnes         for (j=0; j<n; j++) {
1315ef9f2a5SBarry Smith           if (idxn[j] < 0) continue;
132e32f2f54SBarry Smith           if (idxn[j] >= mat->cmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
13339b7565bSBarry Smith           ierr = MatSetValues(A->A,1,&row,1,&idxn[j],v+i+j*m,addv);CHKERRQ(ierr);
13439b7565bSBarry Smith         }
1358965ea79SLois Curfman McInnes       }
1362205254eSKarl Rupp     } else if (!A->donotstash) {
1375080c13bSMatthew G Knepley       mat->assembled = PETSC_FALSE;
13839b7565bSBarry Smith       if (roworiented) {
139b400d20cSBarry Smith         ierr = MatStashValuesRow_Private(&mat->stash,idxm[i],n,idxn,v+i*n,PETSC_FALSE);CHKERRQ(ierr);
140d36fbae8SSatish Balay       } else {
141b400d20cSBarry Smith         ierr = MatStashValuesCol_Private(&mat->stash,idxm[i],n,idxn,v+i,m,PETSC_FALSE);CHKERRQ(ierr);
14239b7565bSBarry Smith       }
143b49de8d1SLois Curfman McInnes     }
144b49de8d1SLois Curfman McInnes   }
1453a40ed3dSBarry Smith   PetscFunctionReturn(0);
146b49de8d1SLois Curfman McInnes }
147b49de8d1SLois Curfman McInnes 
14813f74950SBarry Smith PetscErrorCode MatGetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],PetscScalar v[])
149b49de8d1SLois Curfman McInnes {
150b49de8d1SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
151dfbe8321SBarry Smith   PetscErrorCode ierr;
152d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
153b49de8d1SLois Curfman McInnes 
1543a40ed3dSBarry Smith   PetscFunctionBegin;
155b49de8d1SLois Curfman McInnes   for (i=0; i<m; i++) {
156e32f2f54SBarry Smith     if (idxm[i] < 0) continue; /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative row"); */
157e32f2f54SBarry Smith     if (idxm[i] >= mat->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
158b49de8d1SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
159b49de8d1SLois Curfman McInnes       row = idxm[i] - rstart;
160b49de8d1SLois Curfman McInnes       for (j=0; j<n; j++) {
161e32f2f54SBarry Smith         if (idxn[j] < 0) continue; /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative column"); */
162e7e72b3dSBarry Smith         if (idxn[j] >= mat->cmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
163b49de8d1SLois Curfman McInnes         ierr = MatGetValues(mdn->A,1,&row,1,&idxn[j],v+i*n+j);CHKERRQ(ierr);
164b49de8d1SLois Curfman McInnes       }
165e7e72b3dSBarry Smith     } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only local values currently supported");
1668965ea79SLois Curfman McInnes   }
1673a40ed3dSBarry Smith   PetscFunctionReturn(0);
1688965ea79SLois Curfman McInnes }
1698965ea79SLois Curfman McInnes 
17049a6ff4bSBarry Smith static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A,PetscInt *lda)
17149a6ff4bSBarry Smith {
17249a6ff4bSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17349a6ff4bSBarry Smith   PetscErrorCode ierr;
17449a6ff4bSBarry Smith 
17549a6ff4bSBarry Smith   PetscFunctionBegin;
17649a6ff4bSBarry Smith   ierr = MatDenseGetLDA(a->A,lda);CHKERRQ(ierr);
17749a6ff4bSBarry Smith   PetscFunctionReturn(0);
17849a6ff4bSBarry Smith }
17949a6ff4bSBarry Smith 
180ad16ce7aSStefano Zampini static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A,PetscInt lda)
181ad16ce7aSStefano Zampini {
182ad16ce7aSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
18317359960SJose E. Roman   PetscBool      iscuda;
184ad16ce7aSStefano Zampini   PetscErrorCode ierr;
185ad16ce7aSStefano Zampini 
186ad16ce7aSStefano Zampini   PetscFunctionBegin;
18717359960SJose E. Roman   if (!a->A) {
18817359960SJose E. Roman     if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18917359960SJose E. Roman     ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr);
19017359960SJose E. Roman     ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr);
19117359960SJose E. Roman     ierr = MatCreate(PETSC_COMM_SELF,&a->A);CHKERRQ(ierr);
19217359960SJose E. Roman     ierr = PetscLogObjectParent((PetscObject)A,(PetscObject)a->A);CHKERRQ(ierr);
19317359960SJose E. Roman     ierr = MatSetSizes(a->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N);CHKERRQ(ierr);
19417359960SJose E. Roman     ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda);CHKERRQ(ierr);
19517359960SJose E. Roman     ierr = MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE);CHKERRQ(ierr);
19617359960SJose E. Roman   }
197ad16ce7aSStefano Zampini   ierr = MatDenseSetLDA(a->A,lda);CHKERRQ(ierr);
198ad16ce7aSStefano Zampini   PetscFunctionReturn(0);
199ad16ce7aSStefano Zampini }
200ad16ce7aSStefano Zampini 
201637a0070SStefano Zampini static PetscErrorCode MatDenseGetArray_MPIDense(Mat A,PetscScalar **array)
202ff14e315SSatish Balay {
203ff14e315SSatish Balay   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
204dfbe8321SBarry Smith   PetscErrorCode ierr;
205ff14e315SSatish Balay 
2063a40ed3dSBarry Smith   PetscFunctionBegin;
207616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2088c778c55SBarry Smith   ierr = MatDenseGetArray(a->A,array);CHKERRQ(ierr);
2093a40ed3dSBarry Smith   PetscFunctionReturn(0);
210ff14e315SSatish Balay }
211ff14e315SSatish Balay 
212637a0070SStefano Zampini static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A,const PetscScalar **array)
2138572280aSBarry Smith {
2148572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2158572280aSBarry Smith   PetscErrorCode ierr;
2168572280aSBarry Smith 
2178572280aSBarry Smith   PetscFunctionBegin;
218616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2198572280aSBarry Smith   ierr = MatDenseGetArrayRead(a->A,array);CHKERRQ(ierr);
2208572280aSBarry Smith   PetscFunctionReturn(0);
2218572280aSBarry Smith }
2228572280aSBarry Smith 
2236947451fSStefano Zampini static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A,PetscScalar **array)
2246947451fSStefano Zampini {
2256947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2266947451fSStefano Zampini   PetscErrorCode ierr;
2276947451fSStefano Zampini 
2286947451fSStefano Zampini   PetscFunctionBegin;
229616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2306947451fSStefano Zampini   ierr = MatDenseGetArrayWrite(a->A,array);CHKERRQ(ierr);
2316947451fSStefano Zampini   PetscFunctionReturn(0);
2326947451fSStefano Zampini }
2336947451fSStefano Zampini 
234637a0070SStefano Zampini static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A,const PetscScalar *array)
235d3042a70SBarry Smith {
236d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
237d3042a70SBarry Smith   PetscErrorCode ierr;
238d3042a70SBarry Smith 
239d3042a70SBarry Smith   PetscFunctionBegin;
240616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
241616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
242d3042a70SBarry Smith   ierr = MatDensePlaceArray(a->A,array);CHKERRQ(ierr);
243d3042a70SBarry Smith   PetscFunctionReturn(0);
244d3042a70SBarry Smith }
245d3042a70SBarry Smith 
246d3042a70SBarry Smith static PetscErrorCode MatDenseResetArray_MPIDense(Mat A)
247d3042a70SBarry Smith {
248d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
249d3042a70SBarry Smith   PetscErrorCode ierr;
250d3042a70SBarry Smith 
251d3042a70SBarry Smith   PetscFunctionBegin;
252616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
253616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
254d3042a70SBarry Smith   ierr = MatDenseResetArray(a->A);CHKERRQ(ierr);
255d3042a70SBarry Smith   PetscFunctionReturn(0);
256d3042a70SBarry Smith }
257d3042a70SBarry Smith 
258d5ea218eSStefano Zampini static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A,const PetscScalar *array)
259d5ea218eSStefano Zampini {
260d5ea218eSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
261d5ea218eSStefano Zampini   PetscErrorCode ierr;
262d5ea218eSStefano Zampini 
263d5ea218eSStefano Zampini   PetscFunctionBegin;
264616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
265616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
266d5ea218eSStefano Zampini   ierr = MatDenseReplaceArray(a->A,array);CHKERRQ(ierr);
267d5ea218eSStefano Zampini   PetscFunctionReturn(0);
268d5ea218eSStefano Zampini }
269d5ea218eSStefano Zampini 
2707dae84e0SHong Zhang static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B)
271ca3fa75bSLois Curfman McInnes {
272ca3fa75bSLois Curfman McInnes   Mat_MPIDense      *mat  = (Mat_MPIDense*)A->data,*newmatd;
2736849ba73SBarry Smith   PetscErrorCode    ierr;
274637a0070SStefano Zampini   PetscInt          lda,i,j,rstart,rend,nrows,ncols,Ncols,nlrows,nlcols;
2755d0c19d7SBarry Smith   const PetscInt    *irow,*icol;
276637a0070SStefano Zampini   const PetscScalar *v;
277637a0070SStefano Zampini   PetscScalar       *bv;
278ca3fa75bSLois Curfman McInnes   Mat               newmat;
2794aa3045dSJed Brown   IS                iscol_local;
28042a884f0SBarry Smith   MPI_Comm          comm_is,comm_mat;
281ca3fa75bSLois Curfman McInnes 
282ca3fa75bSLois Curfman McInnes   PetscFunctionBegin;
28342a884f0SBarry Smith   ierr = PetscObjectGetComm((PetscObject)A,&comm_mat);CHKERRQ(ierr);
28442a884f0SBarry Smith   ierr = PetscObjectGetComm((PetscObject)iscol,&comm_is);CHKERRQ(ierr);
28542a884f0SBarry Smith   if (comm_mat != comm_is) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"IS communicator must match matrix communicator");
28642a884f0SBarry Smith 
2874aa3045dSJed Brown   ierr = ISAllGather(iscol,&iscol_local);CHKERRQ(ierr);
288ca3fa75bSLois Curfman McInnes   ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr);
2894aa3045dSJed Brown   ierr = ISGetIndices(iscol_local,&icol);CHKERRQ(ierr);
290b9b97703SBarry Smith   ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr);
291b9b97703SBarry Smith   ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr);
2924aa3045dSJed Brown   ierr = ISGetSize(iscol,&Ncols);CHKERRQ(ierr); /* global number of columns, size of iscol_local */
293ca3fa75bSLois Curfman McInnes 
294ca3fa75bSLois Curfman McInnes   /* No parallel redistribution currently supported! Should really check each index set
2957eba5e9cSLois Curfman McInnes      to comfirm that it is OK.  ... Currently supports only submatrix same partitioning as
2967eba5e9cSLois Curfman McInnes      original matrix! */
297ca3fa75bSLois Curfman McInnes 
298ca3fa75bSLois Curfman McInnes   ierr = MatGetLocalSize(A,&nlrows,&nlcols);CHKERRQ(ierr);
2997eba5e9cSLois Curfman McInnes   ierr = MatGetOwnershipRange(A,&rstart,&rend);CHKERRQ(ierr);
300ca3fa75bSLois Curfman McInnes 
301ca3fa75bSLois Curfman McInnes   /* Check submatrix call */
302ca3fa75bSLois Curfman McInnes   if (scall == MAT_REUSE_MATRIX) {
303e32f2f54SBarry Smith     /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */
3047eba5e9cSLois Curfman McInnes     /* Really need to test rows and column sizes! */
305ca3fa75bSLois Curfman McInnes     newmat = *B;
306ca3fa75bSLois Curfman McInnes   } else {
307ca3fa75bSLois Curfman McInnes     /* Create and fill new matrix */
308ce94432eSBarry Smith     ierr = MatCreate(PetscObjectComm((PetscObject)A),&newmat);CHKERRQ(ierr);
3094aa3045dSJed Brown     ierr = MatSetSizes(newmat,nrows,ncols,PETSC_DECIDE,Ncols);CHKERRQ(ierr);
3107adad957SLisandro Dalcin     ierr = MatSetType(newmat,((PetscObject)A)->type_name);CHKERRQ(ierr);
3110298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(newmat,NULL);CHKERRQ(ierr);
312ca3fa75bSLois Curfman McInnes   }
313ca3fa75bSLois Curfman McInnes 
314ca3fa75bSLois Curfman McInnes   /* Now extract the data pointers and do the copy, column at a time */
315ca3fa75bSLois Curfman McInnes   newmatd = (Mat_MPIDense*)newmat->data;
316637a0070SStefano Zampini   ierr = MatDenseGetArray(newmatd->A,&bv);CHKERRQ(ierr);
317637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(mat->A,&v);CHKERRQ(ierr);
318637a0070SStefano Zampini   ierr = MatDenseGetLDA(mat->A,&lda);CHKERRQ(ierr);
3194aa3045dSJed Brown   for (i=0; i<Ncols; i++) {
320637a0070SStefano Zampini     const PetscScalar *av = v + lda*icol[i];
321ca3fa75bSLois Curfman McInnes     for (j=0; j<nrows; j++) {
3227eba5e9cSLois Curfman McInnes       *bv++ = av[irow[j] - rstart];
323ca3fa75bSLois Curfman McInnes     }
324ca3fa75bSLois Curfman McInnes   }
325637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(mat->A,&v);CHKERRQ(ierr);
326637a0070SStefano Zampini   ierr = MatDenseRestoreArray(newmatd->A,&bv);CHKERRQ(ierr);
327ca3fa75bSLois Curfman McInnes 
328ca3fa75bSLois Curfman McInnes   /* Assemble the matrices so that the correct flags are set */
329ca3fa75bSLois Curfman McInnes   ierr = MatAssemblyBegin(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
330ca3fa75bSLois Curfman McInnes   ierr = MatAssemblyEnd(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
331ca3fa75bSLois Curfman McInnes 
332ca3fa75bSLois Curfman McInnes   /* Free work space */
333ca3fa75bSLois Curfman McInnes   ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr);
3345bdf786aSShri Abhyankar   ierr = ISRestoreIndices(iscol_local,&icol);CHKERRQ(ierr);
33532bb1f2dSLisandro Dalcin   ierr = ISDestroy(&iscol_local);CHKERRQ(ierr);
336ca3fa75bSLois Curfman McInnes   *B   = newmat;
337ca3fa75bSLois Curfman McInnes   PetscFunctionReturn(0);
338ca3fa75bSLois Curfman McInnes }
339ca3fa75bSLois Curfman McInnes 
340637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A,PetscScalar **array)
341ff14e315SSatish Balay {
34273a71a0fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
34373a71a0fSBarry Smith   PetscErrorCode ierr;
34473a71a0fSBarry Smith 
3453a40ed3dSBarry Smith   PetscFunctionBegin;
3468c778c55SBarry Smith   ierr = MatDenseRestoreArray(a->A,array);CHKERRQ(ierr);
3473a40ed3dSBarry Smith   PetscFunctionReturn(0);
348ff14e315SSatish Balay }
349ff14e315SSatish Balay 
350637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A,const PetscScalar **array)
3518572280aSBarry Smith {
3528572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3538572280aSBarry Smith   PetscErrorCode ierr;
3548572280aSBarry Smith 
3558572280aSBarry Smith   PetscFunctionBegin;
3568572280aSBarry Smith   ierr = MatDenseRestoreArrayRead(a->A,array);CHKERRQ(ierr);
3578572280aSBarry Smith   PetscFunctionReturn(0);
3588572280aSBarry Smith }
3598572280aSBarry Smith 
3606947451fSStefano Zampini PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A,PetscScalar **array)
3616947451fSStefano Zampini {
3626947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3636947451fSStefano Zampini   PetscErrorCode ierr;
3646947451fSStefano Zampini 
3656947451fSStefano Zampini   PetscFunctionBegin;
3666947451fSStefano Zampini   ierr = MatDenseRestoreArrayWrite(a->A,array);CHKERRQ(ierr);
3676947451fSStefano Zampini   PetscFunctionReturn(0);
3686947451fSStefano Zampini }
3696947451fSStefano Zampini 
370dfbe8321SBarry Smith PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat,MatAssemblyType mode)
3718965ea79SLois Curfman McInnes {
37239ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
373dfbe8321SBarry Smith   PetscErrorCode ierr;
37413f74950SBarry Smith   PetscInt       nstash,reallocs;
3758965ea79SLois Curfman McInnes 
3763a40ed3dSBarry Smith   PetscFunctionBegin;
3774067683fSStefano Zampini   if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(0);
3788965ea79SLois Curfman McInnes 
379d0f46423SBarry Smith   ierr = MatStashScatterBegin_Private(mat,&mat->stash,mat->rmap->range);CHKERRQ(ierr);
3808798bf22SSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
381ae15b995SBarry Smith   ierr = PetscInfo2(mdn->A,"Stash has %D entries, uses %D mallocs.\n",nstash,reallocs);CHKERRQ(ierr);
3823a40ed3dSBarry Smith   PetscFunctionReturn(0);
3838965ea79SLois Curfman McInnes }
3848965ea79SLois Curfman McInnes 
385dfbe8321SBarry Smith PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat,MatAssemblyType mode)
3868965ea79SLois Curfman McInnes {
38739ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn=(Mat_MPIDense*)mat->data;
3886849ba73SBarry Smith   PetscErrorCode ierr;
38913f74950SBarry Smith   PetscInt       i,*row,*col,flg,j,rstart,ncols;
39013f74950SBarry Smith   PetscMPIInt    n;
39187828ca2SBarry Smith   PetscScalar    *val;
3928965ea79SLois Curfman McInnes 
3933a40ed3dSBarry Smith   PetscFunctionBegin;
394910cf402Sprj-   if (!mdn->donotstash && !mat->nooffprocentries) {
3958965ea79SLois Curfman McInnes     /*  wait on receives */
3967ef1d9bdSSatish Balay     while (1) {
3978798bf22SSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
3987ef1d9bdSSatish Balay       if (!flg) break;
3998965ea79SLois Curfman McInnes 
4007ef1d9bdSSatish Balay       for (i=0; i<n;) {
4017ef1d9bdSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
4022205254eSKarl Rupp         for (j=i,rstart=row[j]; j<n; j++) {
4032205254eSKarl Rupp           if (row[j] != rstart) break;
4042205254eSKarl Rupp         }
4057ef1d9bdSSatish Balay         if (j < n) ncols = j-i;
4067ef1d9bdSSatish Balay         else       ncols = n-i;
4077ef1d9bdSSatish Balay         /* Now assemble all these values with a single function call */
4084b4eb8d3SJed Brown         ierr = MatSetValues_MPIDense(mat,1,row+i,ncols,col+i,val+i,mat->insertmode);CHKERRQ(ierr);
4097ef1d9bdSSatish Balay         i    = j;
4108965ea79SLois Curfman McInnes       }
4117ef1d9bdSSatish Balay     }
4128798bf22SSatish Balay     ierr = MatStashScatterEnd_Private(&mat->stash);CHKERRQ(ierr);
413910cf402Sprj-   }
4148965ea79SLois Curfman McInnes 
41539ddd567SLois Curfman McInnes   ierr = MatAssemblyBegin(mdn->A,mode);CHKERRQ(ierr);
41639ddd567SLois Curfman McInnes   ierr = MatAssemblyEnd(mdn->A,mode);CHKERRQ(ierr);
4178965ea79SLois Curfman McInnes 
4186d4a8577SBarry Smith   if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) {
41939ddd567SLois Curfman McInnes     ierr = MatSetUpMultiply_MPIDense(mat);CHKERRQ(ierr);
4208965ea79SLois Curfman McInnes   }
4213a40ed3dSBarry Smith   PetscFunctionReturn(0);
4228965ea79SLois Curfman McInnes }
4238965ea79SLois Curfman McInnes 
424dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_MPIDense(Mat A)
4258965ea79SLois Curfman McInnes {
426dfbe8321SBarry Smith   PetscErrorCode ierr;
42739ddd567SLois Curfman McInnes   Mat_MPIDense   *l = (Mat_MPIDense*)A->data;
4283a40ed3dSBarry Smith 
4293a40ed3dSBarry Smith   PetscFunctionBegin;
4303a40ed3dSBarry Smith   ierr = MatZeroEntries(l->A);CHKERRQ(ierr);
4313a40ed3dSBarry Smith   PetscFunctionReturn(0);
4328965ea79SLois Curfman McInnes }
4338965ea79SLois Curfman McInnes 
434637a0070SStefano Zampini PetscErrorCode MatZeroRows_MPIDense(Mat A,PetscInt n,const PetscInt rows[],PetscScalar diag,Vec x,Vec b)
4358965ea79SLois Curfman McInnes {
43639ddd567SLois Curfman McInnes   Mat_MPIDense      *l = (Mat_MPIDense*)A->data;
4376849ba73SBarry Smith   PetscErrorCode    ierr;
438637a0070SStefano Zampini   PetscInt          i,len,*lrows;
439637a0070SStefano Zampini 
440637a0070SStefano Zampini   PetscFunctionBegin;
441637a0070SStefano Zampini   /* get locally owned rows */
442637a0070SStefano Zampini   ierr = PetscLayoutMapLocal(A->rmap,n,rows,&len,&lrows,NULL);CHKERRQ(ierr);
443637a0070SStefano Zampini   /* fix right hand side if needed */
444637a0070SStefano Zampini   if (x && b) {
44597b48c8fSBarry Smith     const PetscScalar *xx;
44697b48c8fSBarry Smith     PetscScalar       *bb;
4478965ea79SLois Curfman McInnes 
44897b48c8fSBarry Smith     ierr = VecGetArrayRead(x, &xx);CHKERRQ(ierr);
449637a0070SStefano Zampini     ierr = VecGetArrayWrite(b, &bb);CHKERRQ(ierr);
450637a0070SStefano Zampini     for (i=0;i<len;++i) bb[lrows[i]] = diag*xx[lrows[i]];
45197b48c8fSBarry Smith     ierr = VecRestoreArrayRead(x, &xx);CHKERRQ(ierr);
452637a0070SStefano Zampini     ierr = VecRestoreArrayWrite(b, &bb);CHKERRQ(ierr);
45397b48c8fSBarry Smith   }
454637a0070SStefano Zampini   ierr = MatZeroRows(l->A,len,lrows,0.0,NULL,NULL);CHKERRQ(ierr);
455e2eb51b1SBarry Smith   if (diag != 0.0) {
456637a0070SStefano Zampini     Vec d;
457b9679d65SBarry Smith 
458637a0070SStefano Zampini     ierr = MatCreateVecs(A,NULL,&d);CHKERRQ(ierr);
459637a0070SStefano Zampini     ierr = VecSet(d,diag);CHKERRQ(ierr);
460637a0070SStefano Zampini     ierr = MatDiagonalSet(A,d,INSERT_VALUES);CHKERRQ(ierr);
461637a0070SStefano Zampini     ierr = VecDestroy(&d);CHKERRQ(ierr);
462b9679d65SBarry Smith   }
463606d414cSSatish Balay   ierr = PetscFree(lrows);CHKERRQ(ierr);
4643a40ed3dSBarry Smith   PetscFunctionReturn(0);
4658965ea79SLois Curfman McInnes }
4668965ea79SLois Curfman McInnes 
467cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat,Vec,Vec);
468cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat,Vec,Vec,Vec);
469cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat,Vec,Vec);
470cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat,Vec,Vec,Vec);
471cc2e6a90SBarry Smith 
472dfbe8321SBarry Smith PetscErrorCode MatMult_MPIDense(Mat mat,Vec xx,Vec yy)
4738965ea79SLois Curfman McInnes {
47439ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
475dfbe8321SBarry Smith   PetscErrorCode    ierr;
476637a0070SStefano Zampini   const PetscScalar *ax;
477637a0070SStefano Zampini   PetscScalar       *ay;
478d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
479c456f294SBarry Smith 
4803a40ed3dSBarry Smith   PetscFunctionBegin;
481a256111fSJunchao Zhang   ierr = VecGetArrayReadAndMemType(xx,&ax,&axmtype);CHKERRQ(ierr);
482a256111fSJunchao Zhang   ierr = VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype);CHKERRQ(ierr);
483*ad227feaSJunchao Zhang   ierr = PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE);CHKERRQ(ierr);
484*ad227feaSJunchao Zhang   ierr = PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE);CHKERRQ(ierr);
485a256111fSJunchao Zhang   ierr = VecRestoreArrayAndMemType(mdn->lvec,&ay);CHKERRQ(ierr);
486a256111fSJunchao Zhang   ierr = VecRestoreArrayReadAndMemType(xx,&ax);CHKERRQ(ierr);
487637a0070SStefano Zampini   ierr = (*mdn->A->ops->mult)(mdn->A,mdn->lvec,yy);CHKERRQ(ierr);
4883a40ed3dSBarry Smith   PetscFunctionReturn(0);
4898965ea79SLois Curfman McInnes }
4908965ea79SLois Curfman McInnes 
491dfbe8321SBarry Smith PetscErrorCode MatMultAdd_MPIDense(Mat mat,Vec xx,Vec yy,Vec zz)
4928965ea79SLois Curfman McInnes {
49339ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
494dfbe8321SBarry Smith   PetscErrorCode    ierr;
495637a0070SStefano Zampini   const PetscScalar *ax;
496637a0070SStefano Zampini   PetscScalar       *ay;
497d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
498c456f294SBarry Smith 
4993a40ed3dSBarry Smith   PetscFunctionBegin;
500a256111fSJunchao Zhang   ierr = VecGetArrayReadAndMemType(xx,&ax,&axmtype);CHKERRQ(ierr);
501a256111fSJunchao Zhang   ierr = VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype);CHKERRQ(ierr);
502*ad227feaSJunchao Zhang   ierr = PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE);CHKERRQ(ierr);
503*ad227feaSJunchao Zhang   ierr = PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE);CHKERRQ(ierr);
504a256111fSJunchao Zhang   ierr = VecRestoreArrayAndMemType(mdn->lvec,&ay);CHKERRQ(ierr);
505a256111fSJunchao Zhang   ierr = VecRestoreArrayReadAndMemType(xx,&ax);CHKERRQ(ierr);
506637a0070SStefano Zampini   ierr = (*mdn->A->ops->multadd)(mdn->A,mdn->lvec,yy,zz);CHKERRQ(ierr);
5073a40ed3dSBarry Smith   PetscFunctionReturn(0);
5088965ea79SLois Curfman McInnes }
5098965ea79SLois Curfman McInnes 
510dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_MPIDense(Mat A,Vec xx,Vec yy)
511096963f5SLois Curfman McInnes {
512096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
513dfbe8321SBarry Smith   PetscErrorCode    ierr;
514637a0070SStefano Zampini   const PetscScalar *ax;
515637a0070SStefano Zampini   PetscScalar       *ay;
516d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
517096963f5SLois Curfman McInnes 
5183a40ed3dSBarry Smith   PetscFunctionBegin;
519637a0070SStefano Zampini   ierr = VecSet(yy,0.0);CHKERRQ(ierr);
520637a0070SStefano Zampini   ierr = (*a->A->ops->multtranspose)(a->A,xx,a->lvec);CHKERRQ(ierr);
521a256111fSJunchao Zhang   ierr = VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype);CHKERRQ(ierr);
522a256111fSJunchao Zhang   ierr = VecGetArrayAndMemType(yy,&ay,&aymtype);CHKERRQ(ierr);
523d0295fc0SJunchao Zhang   ierr = PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM);CHKERRQ(ierr);
524637a0070SStefano Zampini   ierr = PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM);CHKERRQ(ierr);
525a256111fSJunchao Zhang   ierr = VecRestoreArrayReadAndMemType(a->lvec,&ax);CHKERRQ(ierr);
526a256111fSJunchao Zhang   ierr = VecRestoreArrayAndMemType(yy,&ay);CHKERRQ(ierr);
5273a40ed3dSBarry Smith   PetscFunctionReturn(0);
528096963f5SLois Curfman McInnes }
529096963f5SLois Curfman McInnes 
530dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A,Vec xx,Vec yy,Vec zz)
531096963f5SLois Curfman McInnes {
532096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
533dfbe8321SBarry Smith   PetscErrorCode    ierr;
534637a0070SStefano Zampini   const PetscScalar *ax;
535637a0070SStefano Zampini   PetscScalar       *ay;
536d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
537096963f5SLois Curfman McInnes 
5383a40ed3dSBarry Smith   PetscFunctionBegin;
5393501a2bdSLois Curfman McInnes   ierr = VecCopy(yy,zz);CHKERRQ(ierr);
540637a0070SStefano Zampini   ierr = (*a->A->ops->multtranspose)(a->A,xx,a->lvec);CHKERRQ(ierr);
541a256111fSJunchao Zhang   ierr = VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype);CHKERRQ(ierr);
542a256111fSJunchao Zhang   ierr = VecGetArrayAndMemType(zz,&ay,&aymtype);CHKERRQ(ierr);
543d0295fc0SJunchao Zhang   ierr = PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM);CHKERRQ(ierr);
544637a0070SStefano Zampini   ierr = PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM);CHKERRQ(ierr);
545a256111fSJunchao Zhang   ierr = VecRestoreArrayReadAndMemType(a->lvec,&ax);CHKERRQ(ierr);
546a256111fSJunchao Zhang   ierr = VecRestoreArrayAndMemType(zz,&ay);CHKERRQ(ierr);
5473a40ed3dSBarry Smith   PetscFunctionReturn(0);
548096963f5SLois Curfman McInnes }
549096963f5SLois Curfman McInnes 
550dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_MPIDense(Mat A,Vec v)
5518965ea79SLois Curfman McInnes {
55239ddd567SLois Curfman McInnes   Mat_MPIDense      *a    = (Mat_MPIDense*)A->data;
553dfbe8321SBarry Smith   PetscErrorCode    ierr;
554637a0070SStefano Zampini   PetscInt          lda,len,i,n,m = A->rmap->n,radd;
55587828ca2SBarry Smith   PetscScalar       *x,zero = 0.0;
556637a0070SStefano Zampini   const PetscScalar *av;
557ed3cc1f0SBarry Smith 
5583a40ed3dSBarry Smith   PetscFunctionBegin;
5592dcb1b2aSMatthew Knepley   ierr = VecSet(v,zero);CHKERRQ(ierr);
5601ebc52fbSHong Zhang   ierr = VecGetArray(v,&x);CHKERRQ(ierr);
561096963f5SLois Curfman McInnes   ierr = VecGetSize(v,&n);CHKERRQ(ierr);
562e32f2f54SBarry Smith   if (n != A->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Nonconforming mat and vec");
563d0f46423SBarry Smith   len  = PetscMin(a->A->rmap->n,a->A->cmap->n);
564d0f46423SBarry Smith   radd = A->rmap->rstart*m;
565637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(a->A,&av);CHKERRQ(ierr);
566637a0070SStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
56744cd7ae7SLois Curfman McInnes   for (i=0; i<len; i++) {
568637a0070SStefano Zampini     x[i] = av[radd + i*lda + i];
569096963f5SLois Curfman McInnes   }
570637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,&av);CHKERRQ(ierr);
5711ebc52fbSHong Zhang   ierr = VecRestoreArray(v,&x);CHKERRQ(ierr);
5723a40ed3dSBarry Smith   PetscFunctionReturn(0);
5738965ea79SLois Curfman McInnes }
5748965ea79SLois Curfman McInnes 
575dfbe8321SBarry Smith PetscErrorCode MatDestroy_MPIDense(Mat mat)
5768965ea79SLois Curfman McInnes {
5773501a2bdSLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
578dfbe8321SBarry Smith   PetscErrorCode ierr;
579ed3cc1f0SBarry Smith 
5803a40ed3dSBarry Smith   PetscFunctionBegin;
581aa482453SBarry Smith #if defined(PETSC_USE_LOG)
582d0f46423SBarry Smith   PetscLogObjectState((PetscObject)mat,"Rows=%D, Cols=%D",mat->rmap->N,mat->cmap->N);
5838965ea79SLois Curfman McInnes #endif
5848798bf22SSatish Balay   ierr = MatStashDestroy_Private(&mat->stash);CHKERRQ(ierr);
585616b8fbbSStefano Zampini   if (mdn->vecinuse) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
586616b8fbbSStefano Zampini   if (mdn->matinuse) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
5876bf464f9SBarry Smith   ierr = MatDestroy(&mdn->A);CHKERRQ(ierr);
5886bf464f9SBarry Smith   ierr = VecDestroy(&mdn->lvec);CHKERRQ(ierr);
589637a0070SStefano Zampini   ierr = PetscSFDestroy(&mdn->Mvctx);CHKERRQ(ierr);
5906947451fSStefano Zampini   ierr = VecDestroy(&mdn->cvec);CHKERRQ(ierr);
5915ea7661aSPierre Jolivet   ierr = MatDestroy(&mdn->cmat);CHKERRQ(ierr);
59201b82886SBarry Smith 
593bf0cc555SLisandro Dalcin   ierr = PetscFree(mat->data);CHKERRQ(ierr);
594f4259b30SLisandro Dalcin   ierr = PetscObjectChangeTypeName((PetscObject)mat,NULL);CHKERRQ(ierr);
5958baccfbdSHong Zhang 
59649a6ff4bSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",NULL);CHKERRQ(ierr);
597ad16ce7aSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",NULL);CHKERRQ(ierr);
5988baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",NULL);CHKERRQ(ierr);
5998572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",NULL);CHKERRQ(ierr);
6008572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",NULL);CHKERRQ(ierr);
6018572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",NULL);CHKERRQ(ierr);
6026947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",NULL);CHKERRQ(ierr);
6036947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",NULL);CHKERRQ(ierr);
604d3042a70SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",NULL);CHKERRQ(ierr);
605d3042a70SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",NULL);CHKERRQ(ierr);
606d5ea218eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",NULL);CHKERRQ(ierr);
6078baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
6088baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",NULL);CHKERRQ(ierr);
6098baccfbdSHong Zhang #endif
610d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
611d24d4204SJose E. Roman   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",NULL);CHKERRQ(ierr);
612d24d4204SJose E. Roman #endif
613bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",NULL);CHKERRQ(ierr);
6144222ddf1SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",NULL);CHKERRQ(ierr);
6154222ddf1SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",NULL);CHKERRQ(ierr);
6166718818eSStefano Zampini #if defined (PETSC_HAVE_CUDA)
6176718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",NULL);CHKERRQ(ierr);
6186718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",NULL);CHKERRQ(ierr);
6196718818eSStefano Zampini #endif
62086aefd0dSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",NULL);CHKERRQ(ierr);
62186aefd0dSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",NULL);CHKERRQ(ierr);
6226947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",NULL);CHKERRQ(ierr);
6236947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",NULL);CHKERRQ(ierr);
6246947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",NULL);CHKERRQ(ierr);
6256947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",NULL);CHKERRQ(ierr);
6266947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",NULL);CHKERRQ(ierr);
6276947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",NULL);CHKERRQ(ierr);
6285ea7661aSPierre Jolivet   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",NULL);CHKERRQ(ierr);
6295ea7661aSPierre Jolivet   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",NULL);CHKERRQ(ierr);
6303a40ed3dSBarry Smith   PetscFunctionReturn(0);
6318965ea79SLois Curfman McInnes }
63239ddd567SLois Curfman McInnes 
63352c5f739Sprj- PETSC_INTERN PetscErrorCode MatView_SeqDense(Mat,PetscViewer);
63452c5f739Sprj- 
6359804daf3SBarry Smith #include <petscdraw.h>
6366849ba73SBarry Smith static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
6378965ea79SLois Curfman McInnes {
63839ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
639dfbe8321SBarry Smith   PetscErrorCode    ierr;
640616b8fbbSStefano Zampini   PetscMPIInt       rank;
64119fd82e9SBarry Smith   PetscViewerType   vtype;
642ace3abfcSBarry Smith   PetscBool         iascii,isdraw;
643b0a32e0cSBarry Smith   PetscViewer       sviewer;
644f3ef73ceSBarry Smith   PetscViewerFormat format;
6458965ea79SLois Curfman McInnes 
6463a40ed3dSBarry Smith   PetscFunctionBegin;
647ffc4695bSBarry Smith   ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)mat),&rank);CHKERRMPI(ierr);
648251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
649251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr);
65032077d6dSBarry Smith   if (iascii) {
651b0a32e0cSBarry Smith     ierr = PetscViewerGetType(viewer,&vtype);CHKERRQ(ierr);
652b0a32e0cSBarry Smith     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
653456192e2SBarry Smith     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
6544e220ebcSLois Curfman McInnes       MatInfo info;
655888f2ed8SSatish Balay       ierr = MatGetInfo(mat,MAT_LOCAL,&info);CHKERRQ(ierr);
6561575c14dSBarry Smith       ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr);
6577b23a99aSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"  [%d] local rows %D nz %D nz alloced %D mem %D \n",rank,mat->rmap->n,(PetscInt)info.nz_used,(PetscInt)info.nz_allocated,(PetscInt)info.memory);CHKERRQ(ierr);
658b0a32e0cSBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
6591575c14dSBarry Smith       ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr);
660637a0070SStefano Zampini       ierr = PetscSFView(mdn->Mvctx,viewer);CHKERRQ(ierr);
6613a40ed3dSBarry Smith       PetscFunctionReturn(0);
662fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
6633a40ed3dSBarry Smith       PetscFunctionReturn(0);
6648965ea79SLois Curfman McInnes     }
665f1af5d2fSBarry Smith   } else if (isdraw) {
666b0a32e0cSBarry Smith     PetscDraw draw;
667ace3abfcSBarry Smith     PetscBool isnull;
668f1af5d2fSBarry Smith 
669b0a32e0cSBarry Smith     ierr = PetscViewerDrawGetDraw(viewer,0,&draw);CHKERRQ(ierr);
670b0a32e0cSBarry Smith     ierr = PetscDrawIsNull(draw,&isnull);CHKERRQ(ierr);
671f1af5d2fSBarry Smith     if (isnull) PetscFunctionReturn(0);
672f1af5d2fSBarry Smith   }
67377ed5343SBarry Smith 
6747da1fb6eSBarry Smith   {
6758965ea79SLois Curfman McInnes     /* assemble the entire matrix onto first processor. */
6768965ea79SLois Curfman McInnes     Mat         A;
677d0f46423SBarry Smith     PetscInt    M = mat->rmap->N,N = mat->cmap->N,m,row,i,nz;
678ba8c8a56SBarry Smith     PetscInt    *cols;
679ba8c8a56SBarry Smith     PetscScalar *vals;
6808965ea79SLois Curfman McInnes 
681ce94432eSBarry Smith     ierr = MatCreate(PetscObjectComm((PetscObject)mat),&A);CHKERRQ(ierr);
6828965ea79SLois Curfman McInnes     if (!rank) {
683f69a0ea3SMatthew Knepley       ierr = MatSetSizes(A,M,N,M,N);CHKERRQ(ierr);
6843a40ed3dSBarry Smith     } else {
685f69a0ea3SMatthew Knepley       ierr = MatSetSizes(A,0,0,M,N);CHKERRQ(ierr);
6868965ea79SLois Curfman McInnes     }
6877adad957SLisandro Dalcin     /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */
688878740d9SKris Buschelman     ierr = MatSetType(A,MATMPIDENSE);CHKERRQ(ierr);
6890298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(A,NULL);CHKERRQ(ierr);
6903bb1ff40SBarry Smith     ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)A);CHKERRQ(ierr);
6918965ea79SLois Curfman McInnes 
69239ddd567SLois Curfman McInnes     /* Copy the matrix ... This isn't the most efficient means,
69339ddd567SLois Curfman McInnes        but it's quick for now */
69451022da4SBarry Smith     A->insertmode = INSERT_VALUES;
6952205254eSKarl Rupp 
6962205254eSKarl Rupp     row = mat->rmap->rstart;
6972205254eSKarl Rupp     m   = mdn->A->rmap->n;
6988965ea79SLois Curfman McInnes     for (i=0; i<m; i++) {
699ba8c8a56SBarry Smith       ierr = MatGetRow_MPIDense(mat,row,&nz,&cols,&vals);CHKERRQ(ierr);
700ba8c8a56SBarry Smith       ierr = MatSetValues_MPIDense(A,1,&row,nz,cols,vals,INSERT_VALUES);CHKERRQ(ierr);
701ba8c8a56SBarry Smith       ierr = MatRestoreRow_MPIDense(mat,row,&nz,&cols,&vals);CHKERRQ(ierr);
70239ddd567SLois Curfman McInnes       row++;
7038965ea79SLois Curfman McInnes     }
7048965ea79SLois Curfman McInnes 
7056d4a8577SBarry Smith     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
7066d4a8577SBarry Smith     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
7073f08860eSBarry Smith     ierr = PetscViewerGetSubViewer(viewer,PETSC_COMM_SELF,&sviewer);CHKERRQ(ierr);
708b9b97703SBarry Smith     if (!rank) {
7091a9d3c3cSBarry Smith       ierr = PetscObjectSetName((PetscObject)((Mat_MPIDense*)(A->data))->A,((PetscObject)mat)->name);CHKERRQ(ierr);
7107da1fb6eSBarry Smith       ierr = MatView_SeqDense(((Mat_MPIDense*)(A->data))->A,sviewer);CHKERRQ(ierr);
7118965ea79SLois Curfman McInnes     }
7123f08860eSBarry Smith     ierr = PetscViewerRestoreSubViewer(viewer,PETSC_COMM_SELF,&sviewer);CHKERRQ(ierr);
713b0a32e0cSBarry Smith     ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
7146bf464f9SBarry Smith     ierr = MatDestroy(&A);CHKERRQ(ierr);
7158965ea79SLois Curfman McInnes   }
7163a40ed3dSBarry Smith   PetscFunctionReturn(0);
7178965ea79SLois Curfman McInnes }
7188965ea79SLois Curfman McInnes 
719dfbe8321SBarry Smith PetscErrorCode MatView_MPIDense(Mat mat,PetscViewer viewer)
7208965ea79SLois Curfman McInnes {
721dfbe8321SBarry Smith   PetscErrorCode ierr;
722ace3abfcSBarry Smith   PetscBool      iascii,isbinary,isdraw,issocket;
7238965ea79SLois Curfman McInnes 
724433994e6SBarry Smith   PetscFunctionBegin;
725251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
726251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr);
727251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERSOCKET,&issocket);CHKERRQ(ierr);
728251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr);
7290f5bd95cSBarry Smith 
73032077d6dSBarry Smith   if (iascii || issocket || isdraw) {
731f1af5d2fSBarry Smith     ierr = MatView_MPIDense_ASCIIorDraworSocket(mat,viewer);CHKERRQ(ierr);
7320f5bd95cSBarry Smith   } else if (isbinary) {
7338491ab44SLisandro Dalcin     ierr = MatView_Dense_Binary(mat,viewer);CHKERRQ(ierr);
73411aeaf0aSBarry Smith   }
7353a40ed3dSBarry Smith   PetscFunctionReturn(0);
7368965ea79SLois Curfman McInnes }
7378965ea79SLois Curfman McInnes 
738dfbe8321SBarry Smith PetscErrorCode MatGetInfo_MPIDense(Mat A,MatInfoType flag,MatInfo *info)
7398965ea79SLois Curfman McInnes {
7403501a2bdSLois Curfman McInnes   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
7413501a2bdSLois Curfman McInnes   Mat            mdn  = mat->A;
742dfbe8321SBarry Smith   PetscErrorCode ierr;
7433966268fSBarry Smith   PetscLogDouble isend[5],irecv[5];
7448965ea79SLois Curfman McInnes 
7453a40ed3dSBarry Smith   PetscFunctionBegin;
7464e220ebcSLois Curfman McInnes   info->block_size = 1.0;
7472205254eSKarl Rupp 
7484e220ebcSLois Curfman McInnes   ierr = MatGetInfo(mdn,MAT_LOCAL,info);CHKERRQ(ierr);
7492205254eSKarl Rupp 
7504e220ebcSLois Curfman McInnes   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
7514e220ebcSLois Curfman McInnes   isend[3] = info->memory;  isend[4] = info->mallocs;
7528965ea79SLois Curfman McInnes   if (flag == MAT_LOCAL) {
7534e220ebcSLois Curfman McInnes     info->nz_used      = isend[0];
7544e220ebcSLois Curfman McInnes     info->nz_allocated = isend[1];
7554e220ebcSLois Curfman McInnes     info->nz_unneeded  = isend[2];
7564e220ebcSLois Curfman McInnes     info->memory       = isend[3];
7574e220ebcSLois Curfman McInnes     info->mallocs      = isend[4];
7588965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_MAX) {
7593966268fSBarry Smith     ierr = MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_MAX,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
7602205254eSKarl Rupp 
7614e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7624e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7634e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7644e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7654e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7668965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_SUM) {
7673966268fSBarry Smith     ierr = MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
7682205254eSKarl Rupp 
7694e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7704e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7714e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7724e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7734e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7748965ea79SLois Curfman McInnes   }
7754e220ebcSLois Curfman McInnes   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
7764e220ebcSLois Curfman McInnes   info->fill_ratio_needed = 0;
7774e220ebcSLois Curfman McInnes   info->factor_mallocs    = 0;
7783a40ed3dSBarry Smith   PetscFunctionReturn(0);
7798965ea79SLois Curfman McInnes }
7808965ea79SLois Curfman McInnes 
781ace3abfcSBarry Smith PetscErrorCode MatSetOption_MPIDense(Mat A,MatOption op,PetscBool flg)
7828965ea79SLois Curfman McInnes {
78339ddd567SLois Curfman McInnes   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
784dfbe8321SBarry Smith   PetscErrorCode ierr;
7858965ea79SLois Curfman McInnes 
7863a40ed3dSBarry Smith   PetscFunctionBegin;
78712c028f9SKris Buschelman   switch (op) {
788512a5fc5SBarry Smith   case MAT_NEW_NONZERO_LOCATIONS:
78912c028f9SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
79012c028f9SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
79143674050SBarry Smith     MatCheckPreallocated(A,1);
7924e0d8c25SBarry Smith     ierr = MatSetOption(a->A,op,flg);CHKERRQ(ierr);
79312c028f9SKris Buschelman     break;
79412c028f9SKris Buschelman   case MAT_ROW_ORIENTED:
79543674050SBarry Smith     MatCheckPreallocated(A,1);
7964e0d8c25SBarry Smith     a->roworiented = flg;
7974e0d8c25SBarry Smith     ierr = MatSetOption(a->A,op,flg);CHKERRQ(ierr);
79812c028f9SKris Buschelman     break;
7998c78258cSHong Zhang   case MAT_FORCE_DIAGONAL_ENTRIES:
80013fa8e87SLisandro Dalcin   case MAT_KEEP_NONZERO_PATTERN:
80112c028f9SKris Buschelman   case MAT_USE_HASH_TABLE:
802071fcb05SBarry Smith   case MAT_SORTED_FULL:
803290bbb0aSBarry Smith     ierr = PetscInfo1(A,"Option %s ignored\n",MatOptions[op]);CHKERRQ(ierr);
80412c028f9SKris Buschelman     break;
80512c028f9SKris Buschelman   case MAT_IGNORE_OFF_PROC_ENTRIES:
8064e0d8c25SBarry Smith     a->donotstash = flg;
80712c028f9SKris Buschelman     break;
80877e54ba9SKris Buschelman   case MAT_SYMMETRIC:
80977e54ba9SKris Buschelman   case MAT_STRUCTURALLY_SYMMETRIC:
8109a4540c5SBarry Smith   case MAT_HERMITIAN:
8119a4540c5SBarry Smith   case MAT_SYMMETRY_ETERNAL:
812600fe468SBarry Smith   case MAT_IGNORE_LOWER_TRIANGULAR:
8135d7aebe8SStefano Zampini   case MAT_IGNORE_ZERO_ENTRIES:
814290bbb0aSBarry Smith     ierr = PetscInfo1(A,"Option %s ignored\n",MatOptions[op]);CHKERRQ(ierr);
81577e54ba9SKris Buschelman     break;
81612c028f9SKris Buschelman   default:
817e32f2f54SBarry Smith     SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"unknown option %s",MatOptions[op]);
8183a40ed3dSBarry Smith   }
8193a40ed3dSBarry Smith   PetscFunctionReturn(0);
8208965ea79SLois Curfman McInnes }
8218965ea79SLois Curfman McInnes 
822dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_MPIDense(Mat A,Vec ll,Vec rr)
8235b2fa520SLois Curfman McInnes {
8245b2fa520SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
825637a0070SStefano Zampini   const PetscScalar *l;
826637a0070SStefano Zampini   PetscScalar       x,*v,*vv,*r;
827dfbe8321SBarry Smith   PetscErrorCode    ierr;
828637a0070SStefano Zampini   PetscInt          i,j,s2a,s3a,s2,s3,m=mdn->A->rmap->n,n=mdn->A->cmap->n,lda;
8295b2fa520SLois Curfman McInnes 
8305b2fa520SLois Curfman McInnes   PetscFunctionBegin;
831637a0070SStefano Zampini   ierr = MatDenseGetArray(mdn->A,&vv);CHKERRQ(ierr);
832637a0070SStefano Zampini   ierr = MatDenseGetLDA(mdn->A,&lda);CHKERRQ(ierr);
83372d926a5SLois Curfman McInnes   ierr = MatGetLocalSize(A,&s2,&s3);CHKERRQ(ierr);
8345b2fa520SLois Curfman McInnes   if (ll) {
83572d926a5SLois Curfman McInnes     ierr = VecGetLocalSize(ll,&s2a);CHKERRQ(ierr);
836637a0070SStefano Zampini     if (s2a != s2) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Left scaling vector non-conforming local size, %D != %D", s2a, s2);
837bca11509SBarry Smith     ierr = VecGetArrayRead(ll,&l);CHKERRQ(ierr);
8385b2fa520SLois Curfman McInnes     for (i=0; i<m; i++) {
8395b2fa520SLois Curfman McInnes       x = l[i];
840637a0070SStefano Zampini       v = vv + i;
841637a0070SStefano Zampini       for (j=0; j<n; j++) { (*v) *= x; v+= lda;}
8425b2fa520SLois Curfman McInnes     }
843bca11509SBarry Smith     ierr = VecRestoreArrayRead(ll,&l);CHKERRQ(ierr);
844637a0070SStefano Zampini     ierr = PetscLogFlops(1.0*n*m);CHKERRQ(ierr);
8455b2fa520SLois Curfman McInnes   }
8465b2fa520SLois Curfman McInnes   if (rr) {
847637a0070SStefano Zampini     const PetscScalar *ar;
848637a0070SStefano Zampini 
849175be7b4SMatthew Knepley     ierr = VecGetLocalSize(rr,&s3a);CHKERRQ(ierr);
850e32f2f54SBarry Smith     if (s3a != s3) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Right scaling vec non-conforming local size, %d != %d.", s3a, s3);
851637a0070SStefano Zampini     ierr = VecGetArrayRead(rr,&ar);CHKERRQ(ierr);
852637a0070SStefano Zampini     ierr = VecGetArray(mdn->lvec,&r);CHKERRQ(ierr);
853*ad227feaSJunchao Zhang     ierr = PetscSFBcastBegin(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE);CHKERRQ(ierr);
854*ad227feaSJunchao Zhang     ierr = PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE);CHKERRQ(ierr);
855637a0070SStefano Zampini     ierr = VecRestoreArrayRead(rr,&ar);CHKERRQ(ierr);
8565b2fa520SLois Curfman McInnes     for (i=0; i<n; i++) {
8575b2fa520SLois Curfman McInnes       x = r[i];
858637a0070SStefano Zampini       v = vv + i*lda;
8592205254eSKarl Rupp       for (j=0; j<m; j++) (*v++) *= x;
8605b2fa520SLois Curfman McInnes     }
861637a0070SStefano Zampini     ierr = VecRestoreArray(mdn->lvec,&r);CHKERRQ(ierr);
862637a0070SStefano Zampini     ierr = PetscLogFlops(1.0*n*m);CHKERRQ(ierr);
8635b2fa520SLois Curfman McInnes   }
864637a0070SStefano Zampini   ierr = MatDenseRestoreArray(mdn->A,&vv);CHKERRQ(ierr);
8655b2fa520SLois Curfman McInnes   PetscFunctionReturn(0);
8665b2fa520SLois Curfman McInnes }
8675b2fa520SLois Curfman McInnes 
868dfbe8321SBarry Smith PetscErrorCode MatNorm_MPIDense(Mat A,NormType type,PetscReal *nrm)
869096963f5SLois Curfman McInnes {
8703501a2bdSLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
871dfbe8321SBarry Smith   PetscErrorCode    ierr;
87213f74950SBarry Smith   PetscInt          i,j;
873616b8fbbSStefano Zampini   PetscMPIInt       size;
874329f5518SBarry Smith   PetscReal         sum = 0.0;
875637a0070SStefano Zampini   const PetscScalar *av,*v;
8763501a2bdSLois Curfman McInnes 
8773a40ed3dSBarry Smith   PetscFunctionBegin;
878637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(mdn->A,&av);CHKERRQ(ierr);
879637a0070SStefano Zampini   v    = av;
880ffc4695bSBarry Smith   ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRMPI(ierr);
881616b8fbbSStefano Zampini   if (size == 1) {
882064f8208SBarry Smith     ierr = MatNorm(mdn->A,type,nrm);CHKERRQ(ierr);
8833501a2bdSLois Curfman McInnes   } else {
8843501a2bdSLois Curfman McInnes     if (type == NORM_FROBENIUS) {
885d0f46423SBarry Smith       for (i=0; i<mdn->A->cmap->n*mdn->A->rmap->n; i++) {
886329f5518SBarry Smith         sum += PetscRealPart(PetscConj(*v)*(*v)); v++;
8873501a2bdSLois Curfman McInnes       }
888b2566f29SBarry Smith       ierr = MPIU_Allreduce(&sum,nrm,1,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
8898f1a2a5eSBarry Smith       *nrm = PetscSqrtReal(*nrm);
890dc0b31edSSatish Balay       ierr = PetscLogFlops(2.0*mdn->A->cmap->n*mdn->A->rmap->n);CHKERRQ(ierr);
8913a40ed3dSBarry Smith     } else if (type == NORM_1) {
892329f5518SBarry Smith       PetscReal *tmp,*tmp2;
893580bdb30SBarry Smith       ierr = PetscCalloc2(A->cmap->N,&tmp,A->cmap->N,&tmp2);CHKERRQ(ierr);
894064f8208SBarry Smith       *nrm = 0.0;
895637a0070SStefano Zampini       v    = av;
896d0f46423SBarry Smith       for (j=0; j<mdn->A->cmap->n; j++) {
897d0f46423SBarry Smith         for (i=0; i<mdn->A->rmap->n; i++) {
89867e560aaSBarry Smith           tmp[j] += PetscAbsScalar(*v);  v++;
8993501a2bdSLois Curfman McInnes         }
9003501a2bdSLois Curfman McInnes       }
901b2566f29SBarry Smith       ierr = MPIU_Allreduce(tmp,tmp2,A->cmap->N,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
902d0f46423SBarry Smith       for (j=0; j<A->cmap->N; j++) {
903064f8208SBarry Smith         if (tmp2[j] > *nrm) *nrm = tmp2[j];
9043501a2bdSLois Curfman McInnes       }
9058627564fSBarry Smith       ierr = PetscFree2(tmp,tmp2);CHKERRQ(ierr);
906d0f46423SBarry Smith       ierr = PetscLogFlops(A->cmap->n*A->rmap->n);CHKERRQ(ierr);
9073a40ed3dSBarry Smith     } else if (type == NORM_INFINITY) { /* max row norm */
908329f5518SBarry Smith       PetscReal ntemp;
9093501a2bdSLois Curfman McInnes       ierr = MatNorm(mdn->A,type,&ntemp);CHKERRQ(ierr);
910b2566f29SBarry Smith       ierr = MPIU_Allreduce(&ntemp,nrm,1,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
911ce94432eSBarry Smith     } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for two norm");
9123501a2bdSLois Curfman McInnes   }
913637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(mdn->A,&av);CHKERRQ(ierr);
9143a40ed3dSBarry Smith   PetscFunctionReturn(0);
9153501a2bdSLois Curfman McInnes }
9163501a2bdSLois Curfman McInnes 
917fc4dec0aSBarry Smith PetscErrorCode MatTranspose_MPIDense(Mat A,MatReuse reuse,Mat *matout)
9183501a2bdSLois Curfman McInnes {
9193501a2bdSLois Curfman McInnes   Mat_MPIDense   *a    = (Mat_MPIDense*)A->data;
9203501a2bdSLois Curfman McInnes   Mat            B;
921d0f46423SBarry Smith   PetscInt       M = A->rmap->N,N = A->cmap->N,m,n,*rwork,rstart = A->rmap->rstart;
9226849ba73SBarry Smith   PetscErrorCode ierr;
923637a0070SStefano Zampini   PetscInt       j,i,lda;
92487828ca2SBarry Smith   PetscScalar    *v;
9253501a2bdSLois Curfman McInnes 
9263a40ed3dSBarry Smith   PetscFunctionBegin;
927cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) {
928ce94432eSBarry Smith     ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
929d0f46423SBarry Smith     ierr = MatSetSizes(B,A->cmap->n,A->rmap->n,N,M);CHKERRQ(ierr);
9307adad957SLisandro Dalcin     ierr = MatSetType(B,((PetscObject)A)->type_name);CHKERRQ(ierr);
9310298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(B,NULL);CHKERRQ(ierr);
932637a0070SStefano Zampini   } else B = *matout;
9333501a2bdSLois Curfman McInnes 
934637a0070SStefano Zampini   m    = a->A->rmap->n; n = a->A->cmap->n;
935637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(a->A,(const PetscScalar**)&v);CHKERRQ(ierr);
936637a0070SStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
937785e854fSJed Brown   ierr = PetscMalloc1(m,&rwork);CHKERRQ(ierr);
9383501a2bdSLois Curfman McInnes   for (i=0; i<m; i++) rwork[i] = rstart + i;
9391acff37aSSatish Balay   for (j=0; j<n; j++) {
9403501a2bdSLois Curfman McInnes     ierr = MatSetValues(B,1,&j,m,rwork,v,INSERT_VALUES);CHKERRQ(ierr);
941637a0070SStefano Zampini     v   += lda;
9423501a2bdSLois Curfman McInnes   }
943637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,(const PetscScalar**)&v);CHKERRQ(ierr);
944606d414cSSatish Balay   ierr = PetscFree(rwork);CHKERRQ(ierr);
9456d4a8577SBarry Smith   ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
9466d4a8577SBarry Smith   ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
947cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) {
9483501a2bdSLois Curfman McInnes     *matout = B;
9493501a2bdSLois Curfman McInnes   } else {
95028be2f97SBarry Smith     ierr = MatHeaderMerge(A,&B);CHKERRQ(ierr);
9513501a2bdSLois Curfman McInnes   }
9523a40ed3dSBarry Smith   PetscFunctionReturn(0);
953096963f5SLois Curfman McInnes }
954096963f5SLois Curfman McInnes 
9556849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat,MatDuplicateOption,Mat*);
95652c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat,PetscScalar);
9578965ea79SLois Curfman McInnes 
9584994cf47SJed Brown PetscErrorCode MatSetUp_MPIDense(Mat A)
959273d9f13SBarry Smith {
960dfbe8321SBarry Smith   PetscErrorCode ierr;
961273d9f13SBarry Smith 
962273d9f13SBarry Smith   PetscFunctionBegin;
96318992e5dSStefano Zampini   ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr);
96418992e5dSStefano Zampini   ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr);
96518992e5dSStefano Zampini   if (!A->preallocated) {
966f4259b30SLisandro Dalcin     ierr = MatMPIDenseSetPreallocation(A,NULL);CHKERRQ(ierr);
96718992e5dSStefano Zampini   }
968273d9f13SBarry Smith   PetscFunctionReturn(0);
969273d9f13SBarry Smith }
970273d9f13SBarry Smith 
971488007eeSBarry Smith PetscErrorCode MatAXPY_MPIDense(Mat Y,PetscScalar alpha,Mat X,MatStructure str)
972488007eeSBarry Smith {
973488007eeSBarry Smith   PetscErrorCode ierr;
974488007eeSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)Y->data, *B = (Mat_MPIDense*)X->data;
975488007eeSBarry Smith 
976488007eeSBarry Smith   PetscFunctionBegin;
977488007eeSBarry Smith   ierr = MatAXPY(A->A,alpha,B->A,str);CHKERRQ(ierr);
978488007eeSBarry Smith   PetscFunctionReturn(0);
979488007eeSBarry Smith }
980488007eeSBarry Smith 
9817087cfbeSBarry Smith PetscErrorCode MatConjugate_MPIDense(Mat mat)
982ba337c44SJed Brown {
983ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
984ba337c44SJed Brown   PetscErrorCode ierr;
985ba337c44SJed Brown 
986ba337c44SJed Brown   PetscFunctionBegin;
987ba337c44SJed Brown   ierr = MatConjugate(a->A);CHKERRQ(ierr);
988ba337c44SJed Brown   PetscFunctionReturn(0);
989ba337c44SJed Brown }
990ba337c44SJed Brown 
991ba337c44SJed Brown PetscErrorCode MatRealPart_MPIDense(Mat A)
992ba337c44SJed Brown {
993ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
994ba337c44SJed Brown   PetscErrorCode ierr;
995ba337c44SJed Brown 
996ba337c44SJed Brown   PetscFunctionBegin;
997ba337c44SJed Brown   ierr = MatRealPart(a->A);CHKERRQ(ierr);
998ba337c44SJed Brown   PetscFunctionReturn(0);
999ba337c44SJed Brown }
1000ba337c44SJed Brown 
1001ba337c44SJed Brown PetscErrorCode MatImaginaryPart_MPIDense(Mat A)
1002ba337c44SJed Brown {
1003ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
1004ba337c44SJed Brown   PetscErrorCode ierr;
1005ba337c44SJed Brown 
1006ba337c44SJed Brown   PetscFunctionBegin;
1007ba337c44SJed Brown   ierr = MatImaginaryPart(a->A);CHKERRQ(ierr);
1008ba337c44SJed Brown   PetscFunctionReturn(0);
1009ba337c44SJed Brown }
1010ba337c44SJed Brown 
101149a6ff4bSBarry Smith static PetscErrorCode MatGetColumnVector_MPIDense(Mat A,Vec v,PetscInt col)
101249a6ff4bSBarry Smith {
101349a6ff4bSBarry Smith   PetscErrorCode ierr;
1014637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
101549a6ff4bSBarry Smith 
101649a6ff4bSBarry Smith   PetscFunctionBegin;
1017637a0070SStefano Zampini   if (!a->A) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing local matrix");
1018637a0070SStefano Zampini   if (!a->A->ops->getcolumnvector) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing get column operation");
1019637a0070SStefano Zampini   ierr = (*a->A->ops->getcolumnvector)(a->A,v,col);CHKERRQ(ierr);
102049a6ff4bSBarry Smith   PetscFunctionReturn(0);
102149a6ff4bSBarry Smith }
102249a6ff4bSBarry Smith 
102352c5f739Sprj- PETSC_INTERN PetscErrorCode MatGetColumnNorms_SeqDense(Mat,NormType,PetscReal*);
102452c5f739Sprj- 
10250716a85fSBarry Smith PetscErrorCode MatGetColumnNorms_MPIDense(Mat A,NormType type,PetscReal *norms)
10260716a85fSBarry Smith {
10270716a85fSBarry Smith   PetscErrorCode ierr;
10280716a85fSBarry Smith   PetscInt       i,n;
10290716a85fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
10300716a85fSBarry Smith   PetscReal      *work;
10310716a85fSBarry Smith 
10320716a85fSBarry Smith   PetscFunctionBegin;
10330298fd71SBarry Smith   ierr = MatGetSize(A,NULL,&n);CHKERRQ(ierr);
1034785e854fSJed Brown   ierr = PetscMalloc1(n,&work);CHKERRQ(ierr);
10350716a85fSBarry Smith   ierr = MatGetColumnNorms_SeqDense(a->A,type,work);CHKERRQ(ierr);
10360716a85fSBarry Smith   if (type == NORM_2) {
10370716a85fSBarry Smith     for (i=0; i<n; i++) work[i] *= work[i];
10380716a85fSBarry Smith   }
10390716a85fSBarry Smith   if (type == NORM_INFINITY) {
1040b2566f29SBarry Smith     ierr = MPIU_Allreduce(work,norms,n,MPIU_REAL,MPIU_MAX,A->hdr.comm);CHKERRQ(ierr);
10410716a85fSBarry Smith   } else {
1042b2566f29SBarry Smith     ierr = MPIU_Allreduce(work,norms,n,MPIU_REAL,MPIU_SUM,A->hdr.comm);CHKERRQ(ierr);
10430716a85fSBarry Smith   }
10440716a85fSBarry Smith   ierr = PetscFree(work);CHKERRQ(ierr);
10450716a85fSBarry Smith   if (type == NORM_2) {
10468f1a2a5eSBarry Smith     for (i=0; i<n; i++) norms[i] = PetscSqrtReal(norms[i]);
10470716a85fSBarry Smith   }
10480716a85fSBarry Smith   PetscFunctionReturn(0);
10490716a85fSBarry Smith }
10500716a85fSBarry Smith 
1051637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
10526947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10536947451fSStefano Zampini {
10546947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10556947451fSStefano Zampini   PetscErrorCode ierr;
10566947451fSStefano Zampini   PetscInt       lda;
10576947451fSStefano Zampini 
10586947451fSStefano Zampini   PetscFunctionBegin;
1059616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1060616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10616947451fSStefano Zampini   if (!a->cvec) {
10626947451fSStefano Zampini     ierr = VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
1063616b8fbbSStefano Zampini     ierr = PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec);CHKERRQ(ierr);
10646947451fSStefano Zampini   }
10656947451fSStefano Zampini   a->vecinuse = col + 1;
10666947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
10676947451fSStefano Zampini   ierr = MatDenseCUDAGetArray(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
10686947451fSStefano Zampini   ierr = VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
10696947451fSStefano Zampini   *v   = a->cvec;
10706947451fSStefano Zampini   PetscFunctionReturn(0);
10716947451fSStefano Zampini }
10726947451fSStefano Zampini 
10736947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10746947451fSStefano Zampini {
10756947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10766947451fSStefano Zampini   PetscErrorCode ierr;
10776947451fSStefano Zampini 
10786947451fSStefano Zampini   PetscFunctionBegin;
10795ea7661aSPierre Jolivet   if (!a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
10806947451fSStefano Zampini   if (!a->cvec) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
10816947451fSStefano Zampini   a->vecinuse = 0;
10826947451fSStefano Zampini   ierr = MatDenseCUDARestoreArray(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
10836947451fSStefano Zampini   ierr = VecCUDAResetArray(a->cvec);CHKERRQ(ierr);
10846947451fSStefano Zampini   *v   = NULL;
10856947451fSStefano Zampini   PetscFunctionReturn(0);
10866947451fSStefano Zampini }
10876947451fSStefano Zampini 
10886947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10896947451fSStefano Zampini {
10906947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10916947451fSStefano Zampini   PetscInt       lda;
10926947451fSStefano Zampini   PetscErrorCode ierr;
10936947451fSStefano Zampini 
10946947451fSStefano Zampini   PetscFunctionBegin;
1095616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1096616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10976947451fSStefano Zampini   if (!a->cvec) {
10986947451fSStefano Zampini     ierr = VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
1099616b8fbbSStefano Zampini     ierr = PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec);CHKERRQ(ierr);
11006947451fSStefano Zampini   }
11016947451fSStefano Zampini   a->vecinuse = col + 1;
11026947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
11036947451fSStefano Zampini   ierr = MatDenseCUDAGetArrayRead(a->A,&a->ptrinuse);CHKERRQ(ierr);
11046947451fSStefano Zampini   ierr = VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
11056947451fSStefano Zampini   ierr = VecLockReadPush(a->cvec);CHKERRQ(ierr);
11066947451fSStefano Zampini   *v   = a->cvec;
11076947451fSStefano Zampini   PetscFunctionReturn(0);
11086947451fSStefano Zampini }
11096947451fSStefano Zampini 
11106947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11116947451fSStefano Zampini {
11126947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11136947451fSStefano Zampini   PetscErrorCode ierr;
11146947451fSStefano Zampini 
11156947451fSStefano Zampini   PetscFunctionBegin;
1116616b8fbbSStefano Zampini   if (!a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
1117616b8fbbSStefano Zampini   if (!a->cvec) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
11186947451fSStefano Zampini   a->vecinuse = 0;
11196947451fSStefano Zampini   ierr = MatDenseCUDARestoreArrayRead(a->A,&a->ptrinuse);CHKERRQ(ierr);
11206947451fSStefano Zampini   ierr = VecLockReadPop(a->cvec);CHKERRQ(ierr);
11216947451fSStefano Zampini   ierr = VecCUDAResetArray(a->cvec);CHKERRQ(ierr);
11226947451fSStefano Zampini   *v   = NULL;
11236947451fSStefano Zampini   PetscFunctionReturn(0);
11246947451fSStefano Zampini }
11256947451fSStefano Zampini 
11266947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11276947451fSStefano Zampini {
11286947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11296947451fSStefano Zampini   PetscErrorCode ierr;
11306947451fSStefano Zampini   PetscInt       lda;
11316947451fSStefano Zampini 
11326947451fSStefano Zampini   PetscFunctionBegin;
1133616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1134616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11356947451fSStefano Zampini   if (!a->cvec) {
11366947451fSStefano Zampini     ierr = VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
1137616b8fbbSStefano Zampini     ierr = PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec);CHKERRQ(ierr);
11386947451fSStefano Zampini   }
11396947451fSStefano Zampini   a->vecinuse = col + 1;
11406947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
11416947451fSStefano Zampini   ierr = MatDenseCUDAGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
11426947451fSStefano Zampini   ierr = VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
11436947451fSStefano Zampini   *v   = a->cvec;
11446947451fSStefano Zampini   PetscFunctionReturn(0);
11456947451fSStefano Zampini }
11466947451fSStefano Zampini 
11476947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11486947451fSStefano Zampini {
11496947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11506947451fSStefano Zampini   PetscErrorCode ierr;
11516947451fSStefano Zampini 
11526947451fSStefano Zampini   PetscFunctionBegin;
1153616b8fbbSStefano Zampini   if (!a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
1154616b8fbbSStefano Zampini   if (!a->cvec) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
11556947451fSStefano Zampini   a->vecinuse = 0;
11566947451fSStefano Zampini   ierr = MatDenseCUDARestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
11576947451fSStefano Zampini   ierr = VecCUDAResetArray(a->cvec);CHKERRQ(ierr);
11586947451fSStefano Zampini   *v   = NULL;
11596947451fSStefano Zampini   PetscFunctionReturn(0);
11606947451fSStefano Zampini }
11616947451fSStefano Zampini 
1162637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAPlaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1163637a0070SStefano Zampini {
1164637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1165637a0070SStefano Zampini   PetscErrorCode ierr;
1166637a0070SStefano Zampini 
1167637a0070SStefano Zampini   PetscFunctionBegin;
1168616b8fbbSStefano Zampini   if (l->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1169616b8fbbSStefano Zampini   if (l->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1170637a0070SStefano Zampini   ierr = MatDenseCUDAPlaceArray(l->A,a);CHKERRQ(ierr);
1171637a0070SStefano Zampini   PetscFunctionReturn(0);
1172637a0070SStefano Zampini }
1173637a0070SStefano Zampini 
1174637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAResetArray_MPIDenseCUDA(Mat A)
1175637a0070SStefano Zampini {
1176637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1177637a0070SStefano Zampini   PetscErrorCode ierr;
1178637a0070SStefano Zampini 
1179637a0070SStefano Zampini   PetscFunctionBegin;
1180616b8fbbSStefano Zampini   if (l->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1181616b8fbbSStefano Zampini   if (l->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1182637a0070SStefano Zampini   ierr = MatDenseCUDAResetArray(l->A);CHKERRQ(ierr);
1183637a0070SStefano Zampini   PetscFunctionReturn(0);
1184637a0070SStefano Zampini }
1185637a0070SStefano Zampini 
1186d5ea218eSStefano Zampini static PetscErrorCode MatDenseCUDAReplaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1187d5ea218eSStefano Zampini {
1188d5ea218eSStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1189d5ea218eSStefano Zampini   PetscErrorCode ierr;
1190d5ea218eSStefano Zampini 
1191d5ea218eSStefano Zampini   PetscFunctionBegin;
1192616b8fbbSStefano Zampini   if (l->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1193616b8fbbSStefano Zampini   if (l->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1194d5ea218eSStefano Zampini   ierr = MatDenseCUDAReplaceArray(l->A,a);CHKERRQ(ierr);
1195d5ea218eSStefano Zampini   PetscFunctionReturn(0);
1196d5ea218eSStefano Zampini }
1197d5ea218eSStefano Zampini 
1198637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1199637a0070SStefano Zampini {
1200637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1201637a0070SStefano Zampini   PetscErrorCode ierr;
1202637a0070SStefano Zampini 
1203637a0070SStefano Zampini   PetscFunctionBegin;
1204637a0070SStefano Zampini   ierr = MatDenseCUDAGetArrayWrite(l->A,a);CHKERRQ(ierr);
1205637a0070SStefano Zampini   PetscFunctionReturn(0);
1206637a0070SStefano Zampini }
1207637a0070SStefano Zampini 
1208637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1209637a0070SStefano Zampini {
1210637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1211637a0070SStefano Zampini   PetscErrorCode ierr;
1212637a0070SStefano Zampini 
1213637a0070SStefano Zampini   PetscFunctionBegin;
1214637a0070SStefano Zampini   ierr = MatDenseCUDARestoreArrayWrite(l->A,a);CHKERRQ(ierr);
1215637a0070SStefano Zampini   PetscFunctionReturn(0);
1216637a0070SStefano Zampini }
1217637a0070SStefano Zampini 
1218637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1219637a0070SStefano Zampini {
1220637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1221637a0070SStefano Zampini   PetscErrorCode ierr;
1222637a0070SStefano Zampini 
1223637a0070SStefano Zampini   PetscFunctionBegin;
1224637a0070SStefano Zampini   ierr = MatDenseCUDAGetArrayRead(l->A,a);CHKERRQ(ierr);
1225637a0070SStefano Zampini   PetscFunctionReturn(0);
1226637a0070SStefano Zampini }
1227637a0070SStefano Zampini 
1228637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1229637a0070SStefano Zampini {
1230637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1231637a0070SStefano Zampini   PetscErrorCode ierr;
1232637a0070SStefano Zampini 
1233637a0070SStefano Zampini   PetscFunctionBegin;
1234637a0070SStefano Zampini   ierr = MatDenseCUDARestoreArrayRead(l->A,a);CHKERRQ(ierr);
1235637a0070SStefano Zampini   PetscFunctionReturn(0);
1236637a0070SStefano Zampini }
1237637a0070SStefano Zampini 
1238637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1239637a0070SStefano Zampini {
1240637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1241637a0070SStefano Zampini   PetscErrorCode ierr;
1242637a0070SStefano Zampini 
1243637a0070SStefano Zampini   PetscFunctionBegin;
1244637a0070SStefano Zampini   ierr = MatDenseCUDAGetArray(l->A,a);CHKERRQ(ierr);
1245637a0070SStefano Zampini   PetscFunctionReturn(0);
1246637a0070SStefano Zampini }
1247637a0070SStefano Zampini 
1248637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1249637a0070SStefano Zampini {
1250637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1251637a0070SStefano Zampini   PetscErrorCode ierr;
1252637a0070SStefano Zampini 
1253637a0070SStefano Zampini   PetscFunctionBegin;
1254637a0070SStefano Zampini   ierr = MatDenseCUDARestoreArray(l->A,a);CHKERRQ(ierr);
1255637a0070SStefano Zampini   PetscFunctionReturn(0);
1256637a0070SStefano Zampini }
1257637a0070SStefano Zampini 
12586947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12596947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12606947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat,PetscInt,Vec*);
12616947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12626947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12636947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat,PetscInt,Vec*);
12645ea7661aSPierre Jolivet static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat,Mat*);
12656947451fSStefano Zampini 
1266637a0070SStefano Zampini static PetscErrorCode MatBindToCPU_MPIDenseCUDA(Mat mat,PetscBool bind)
1267637a0070SStefano Zampini {
1268637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)mat->data;
1269637a0070SStefano Zampini   PetscErrorCode ierr;
1270637a0070SStefano Zampini 
1271637a0070SStefano Zampini   PetscFunctionBegin;
1272616b8fbbSStefano Zampini   if (d->vecinuse) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1273616b8fbbSStefano Zampini   if (d->matinuse) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1274637a0070SStefano Zampini   if (d->A) {
1275637a0070SStefano Zampini     ierr = MatBindToCPU(d->A,bind);CHKERRQ(ierr);
1276637a0070SStefano Zampini   }
1277637a0070SStefano Zampini   mat->boundtocpu = bind;
12786947451fSStefano Zampini   if (!bind) {
12796947451fSStefano Zampini     PetscBool iscuda;
12806947451fSStefano Zampini 
12816947451fSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)d->cvec,VECMPICUDA,&iscuda);CHKERRQ(ierr);
12826947451fSStefano Zampini     if (!iscuda) {
12836947451fSStefano Zampini       ierr = VecDestroy(&d->cvec);CHKERRQ(ierr);
1284616b8fbbSStefano Zampini     }
1285616b8fbbSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)d->cmat,MATMPIDENSECUDA,&iscuda);CHKERRQ(ierr);
1286616b8fbbSStefano Zampini     if (!iscuda) {
12875ea7661aSPierre Jolivet       ierr = MatDestroy(&d->cmat);CHKERRQ(ierr);
12886947451fSStefano Zampini     }
12896947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDenseCUDA);CHKERRQ(ierr);
12906947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDenseCUDA);CHKERRQ(ierr);
12916947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDenseCUDA);CHKERRQ(ierr);
12926947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDenseCUDA);CHKERRQ(ierr);
12936947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDenseCUDA);CHKERRQ(ierr);
12946947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDenseCUDA);CHKERRQ(ierr);
12956947451fSStefano Zampini   } else {
12966947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense);CHKERRQ(ierr);
12976947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense);CHKERRQ(ierr);
12986947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense);CHKERRQ(ierr);
12996947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense);CHKERRQ(ierr);
13006947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense);CHKERRQ(ierr);
13016947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense);CHKERRQ(ierr);
1302616b8fbbSStefano Zampini   }
1303616b8fbbSStefano Zampini   if (d->cmat) {
1304616b8fbbSStefano Zampini     ierr = MatBindToCPU(d->cmat,bind);CHKERRQ(ierr);
13056947451fSStefano Zampini   }
1306637a0070SStefano Zampini   PetscFunctionReturn(0);
1307637a0070SStefano Zampini }
1308637a0070SStefano Zampini 
1309637a0070SStefano Zampini PetscErrorCode MatMPIDenseCUDASetPreallocation(Mat A, PetscScalar *d_data)
1310637a0070SStefano Zampini {
1311637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)A->data;
1312637a0070SStefano Zampini   PetscErrorCode ierr;
1313637a0070SStefano Zampini   PetscBool      iscuda;
1314637a0070SStefano Zampini 
1315637a0070SStefano Zampini   PetscFunctionBegin;
1316d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
1317637a0070SStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda);CHKERRQ(ierr);
1318637a0070SStefano Zampini   if (!iscuda) PetscFunctionReturn(0);
1319637a0070SStefano Zampini   ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr);
1320637a0070SStefano Zampini   ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr);
1321637a0070SStefano Zampini   if (!d->A) {
1322637a0070SStefano Zampini     ierr = MatCreate(PETSC_COMM_SELF,&d->A);CHKERRQ(ierr);
1323637a0070SStefano Zampini     ierr = PetscLogObjectParent((PetscObject)A,(PetscObject)d->A);CHKERRQ(ierr);
1324637a0070SStefano Zampini     ierr = MatSetSizes(d->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N);CHKERRQ(ierr);
1325637a0070SStefano Zampini   }
1326637a0070SStefano Zampini   ierr = MatSetType(d->A,MATSEQDENSECUDA);CHKERRQ(ierr);
1327637a0070SStefano Zampini   ierr = MatSeqDenseCUDASetPreallocation(d->A,d_data);CHKERRQ(ierr);
1328637a0070SStefano Zampini   A->preallocated = PETSC_TRUE;
1329637a0070SStefano Zampini   PetscFunctionReturn(0);
1330637a0070SStefano Zampini }
1331637a0070SStefano Zampini #endif
1332637a0070SStefano Zampini 
133373a71a0fSBarry Smith static PetscErrorCode MatSetRandom_MPIDense(Mat x,PetscRandom rctx)
133473a71a0fSBarry Smith {
133573a71a0fSBarry Smith   Mat_MPIDense   *d = (Mat_MPIDense*)x->data;
133673a71a0fSBarry Smith   PetscErrorCode ierr;
133773a71a0fSBarry Smith 
133873a71a0fSBarry Smith   PetscFunctionBegin;
1339637a0070SStefano Zampini   ierr = MatSetRandom(d->A,rctx);CHKERRQ(ierr);
134073a71a0fSBarry Smith   PetscFunctionReturn(0);
134173a71a0fSBarry Smith }
134273a71a0fSBarry Smith 
13433b49f96aSBarry Smith static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A,PetscBool  *missing,PetscInt *d)
13443b49f96aSBarry Smith {
13453b49f96aSBarry Smith   PetscFunctionBegin;
13463b49f96aSBarry Smith   *missing = PETSC_FALSE;
13473b49f96aSBarry Smith   PetscFunctionReturn(0);
13483b49f96aSBarry Smith }
13493b49f96aSBarry Smith 
13504222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1351cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13526718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13536718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
13546718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat,Mat,PetscBool*);
13556718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat,PetscViewer);
1356cc48ffa7SToby Isaac 
13578965ea79SLois Curfman McInnes /* -------------------------------------------------------------------*/
135809dc0095SBarry Smith static struct _MatOps MatOps_Values = { MatSetValues_MPIDense,
135909dc0095SBarry Smith                                         MatGetRow_MPIDense,
136009dc0095SBarry Smith                                         MatRestoreRow_MPIDense,
136109dc0095SBarry Smith                                         MatMult_MPIDense,
136297304618SKris Buschelman                                 /*  4*/ MatMultAdd_MPIDense,
13637c922b88SBarry Smith                                         MatMultTranspose_MPIDense,
13647c922b88SBarry Smith                                         MatMultTransposeAdd_MPIDense,
1365f4259b30SLisandro Dalcin                                         NULL,
1366f4259b30SLisandro Dalcin                                         NULL,
1367f4259b30SLisandro Dalcin                                         NULL,
1368f4259b30SLisandro Dalcin                                 /* 10*/ NULL,
1369f4259b30SLisandro Dalcin                                         NULL,
1370f4259b30SLisandro Dalcin                                         NULL,
1371f4259b30SLisandro Dalcin                                         NULL,
137209dc0095SBarry Smith                                         MatTranspose_MPIDense,
137397304618SKris Buschelman                                 /* 15*/ MatGetInfo_MPIDense,
13746e4ee0c6SHong Zhang                                         MatEqual_MPIDense,
137509dc0095SBarry Smith                                         MatGetDiagonal_MPIDense,
13765b2fa520SLois Curfman McInnes                                         MatDiagonalScale_MPIDense,
137709dc0095SBarry Smith                                         MatNorm_MPIDense,
137897304618SKris Buschelman                                 /* 20*/ MatAssemblyBegin_MPIDense,
137909dc0095SBarry Smith                                         MatAssemblyEnd_MPIDense,
138009dc0095SBarry Smith                                         MatSetOption_MPIDense,
138109dc0095SBarry Smith                                         MatZeroEntries_MPIDense,
1382d519adbfSMatthew Knepley                                 /* 24*/ MatZeroRows_MPIDense,
1383f4259b30SLisandro Dalcin                                         NULL,
1384f4259b30SLisandro Dalcin                                         NULL,
1385f4259b30SLisandro Dalcin                                         NULL,
1386f4259b30SLisandro Dalcin                                         NULL,
13874994cf47SJed Brown                                 /* 29*/ MatSetUp_MPIDense,
1388f4259b30SLisandro Dalcin                                         NULL,
1389f4259b30SLisandro Dalcin                                         NULL,
1390c56a70eeSBarry Smith                                         MatGetDiagonalBlock_MPIDense,
1391f4259b30SLisandro Dalcin                                         NULL,
1392d519adbfSMatthew Knepley                                 /* 34*/ MatDuplicate_MPIDense,
1393f4259b30SLisandro Dalcin                                         NULL,
1394f4259b30SLisandro Dalcin                                         NULL,
1395f4259b30SLisandro Dalcin                                         NULL,
1396f4259b30SLisandro Dalcin                                         NULL,
1397d519adbfSMatthew Knepley                                 /* 39*/ MatAXPY_MPIDense,
13987dae84e0SHong Zhang                                         MatCreateSubMatrices_MPIDense,
1399f4259b30SLisandro Dalcin                                         NULL,
140009dc0095SBarry Smith                                         MatGetValues_MPIDense,
1401a76f77c3SStefano Zampini                                         MatCopy_MPIDense,
1402f4259b30SLisandro Dalcin                                 /* 44*/ NULL,
140309dc0095SBarry Smith                                         MatScale_MPIDense,
14047d68702bSBarry Smith                                         MatShift_Basic,
1405f4259b30SLisandro Dalcin                                         NULL,
1406f4259b30SLisandro Dalcin                                         NULL,
140773a71a0fSBarry Smith                                 /* 49*/ MatSetRandom_MPIDense,
1408f4259b30SLisandro Dalcin                                         NULL,
1409f4259b30SLisandro Dalcin                                         NULL,
1410f4259b30SLisandro Dalcin                                         NULL,
1411f4259b30SLisandro Dalcin                                         NULL,
1412f4259b30SLisandro Dalcin                                 /* 54*/ NULL,
1413f4259b30SLisandro Dalcin                                         NULL,
1414f4259b30SLisandro Dalcin                                         NULL,
1415f4259b30SLisandro Dalcin                                         NULL,
1416f4259b30SLisandro Dalcin                                         NULL,
14177dae84e0SHong Zhang                                 /* 59*/ MatCreateSubMatrix_MPIDense,
1418b9b97703SBarry Smith                                         MatDestroy_MPIDense,
1419b9b97703SBarry Smith                                         MatView_MPIDense,
1420f4259b30SLisandro Dalcin                                         NULL,
1421f4259b30SLisandro Dalcin                                         NULL,
1422f4259b30SLisandro Dalcin                                 /* 64*/ NULL,
1423f4259b30SLisandro Dalcin                                         NULL,
1424f4259b30SLisandro Dalcin                                         NULL,
1425f4259b30SLisandro Dalcin                                         NULL,
1426f4259b30SLisandro Dalcin                                         NULL,
1427f4259b30SLisandro Dalcin                                 /* 69*/ NULL,
1428f4259b30SLisandro Dalcin                                         NULL,
1429f4259b30SLisandro Dalcin                                         NULL,
1430f4259b30SLisandro Dalcin                                         NULL,
1431f4259b30SLisandro Dalcin                                         NULL,
1432f4259b30SLisandro Dalcin                                 /* 74*/ NULL,
1433f4259b30SLisandro Dalcin                                         NULL,
1434f4259b30SLisandro Dalcin                                         NULL,
1435f4259b30SLisandro Dalcin                                         NULL,
1436f4259b30SLisandro Dalcin                                         NULL,
1437f4259b30SLisandro Dalcin                                 /* 79*/ NULL,
1438f4259b30SLisandro Dalcin                                         NULL,
1439f4259b30SLisandro Dalcin                                         NULL,
1440f4259b30SLisandro Dalcin                                         NULL,
14415bba2384SShri Abhyankar                                 /* 83*/ MatLoad_MPIDense,
1442f4259b30SLisandro Dalcin                                         NULL,
1443f4259b30SLisandro Dalcin                                         NULL,
1444f4259b30SLisandro Dalcin                                         NULL,
1445f4259b30SLisandro Dalcin                                         NULL,
1446f4259b30SLisandro Dalcin                                         NULL,
1447f4259b30SLisandro Dalcin                                 /* 89*/ NULL,
1448f4259b30SLisandro Dalcin                                         NULL,
1449f4259b30SLisandro Dalcin                                         NULL,
1450f4259b30SLisandro Dalcin                                         NULL,
1451f4259b30SLisandro Dalcin                                         NULL,
1452f4259b30SLisandro Dalcin                                 /* 94*/ NULL,
1453f4259b30SLisandro Dalcin                                         NULL,
14546718818eSStefano Zampini                                         MatMatTransposeMultSymbolic_MPIDense_MPIDense,
1455cc48ffa7SToby Isaac                                         MatMatTransposeMultNumeric_MPIDense_MPIDense,
1456f4259b30SLisandro Dalcin                                         NULL,
14574222ddf1SHong Zhang                                 /* 99*/ MatProductSetFromOptions_MPIDense,
1458f4259b30SLisandro Dalcin                                         NULL,
1459f4259b30SLisandro Dalcin                                         NULL,
1460ba337c44SJed Brown                                         MatConjugate_MPIDense,
1461f4259b30SLisandro Dalcin                                         NULL,
1462f4259b30SLisandro Dalcin                                 /*104*/ NULL,
1463ba337c44SJed Brown                                         MatRealPart_MPIDense,
1464ba337c44SJed Brown                                         MatImaginaryPart_MPIDense,
1465f4259b30SLisandro Dalcin                                         NULL,
1466f4259b30SLisandro Dalcin                                         NULL,
1467f4259b30SLisandro Dalcin                                 /*109*/ NULL,
1468f4259b30SLisandro Dalcin                                         NULL,
1469f4259b30SLisandro Dalcin                                         NULL,
147049a6ff4bSBarry Smith                                         MatGetColumnVector_MPIDense,
14713b49f96aSBarry Smith                                         MatMissingDiagonal_MPIDense,
1472f4259b30SLisandro Dalcin                                 /*114*/ NULL,
1473f4259b30SLisandro Dalcin                                         NULL,
1474f4259b30SLisandro Dalcin                                         NULL,
1475f4259b30SLisandro Dalcin                                         NULL,
1476f4259b30SLisandro Dalcin                                         NULL,
1477f4259b30SLisandro Dalcin                                 /*119*/ NULL,
1478f4259b30SLisandro Dalcin                                         NULL,
1479f4259b30SLisandro Dalcin                                         NULL,
1480f4259b30SLisandro Dalcin                                         NULL,
1481f4259b30SLisandro Dalcin                                         NULL,
1482f4259b30SLisandro Dalcin                                 /*124*/ NULL,
14833964eb88SJed Brown                                         MatGetColumnNorms_MPIDense,
1484f4259b30SLisandro Dalcin                                         NULL,
1485f4259b30SLisandro Dalcin                                         NULL,
1486f4259b30SLisandro Dalcin                                         NULL,
1487f4259b30SLisandro Dalcin                                 /*129*/ NULL,
1488f4259b30SLisandro Dalcin                                         NULL,
14896718818eSStefano Zampini                                         MatTransposeMatMultSymbolic_MPIDense_MPIDense,
1490cb20be35SHong Zhang                                         MatTransposeMatMultNumeric_MPIDense_MPIDense,
1491f4259b30SLisandro Dalcin                                         NULL,
1492f4259b30SLisandro Dalcin                                 /*134*/ NULL,
1493f4259b30SLisandro Dalcin                                         NULL,
1494f4259b30SLisandro Dalcin                                         NULL,
1495f4259b30SLisandro Dalcin                                         NULL,
1496f4259b30SLisandro Dalcin                                         NULL,
1497f4259b30SLisandro Dalcin                                 /*139*/ NULL,
1498f4259b30SLisandro Dalcin                                         NULL,
1499f4259b30SLisandro Dalcin                                         NULL,
1500f4259b30SLisandro Dalcin                                         NULL,
1501f4259b30SLisandro Dalcin                                         NULL,
15024222ddf1SHong Zhang                                         MatCreateMPIMatConcatenateSeqMat_MPIDense,
1503f4259b30SLisandro Dalcin                                 /*145*/ NULL,
1504f4259b30SLisandro Dalcin                                         NULL,
1505f4259b30SLisandro Dalcin                                         NULL
1506ba337c44SJed Brown };
15078965ea79SLois Curfman McInnes 
15087087cfbeSBarry Smith PetscErrorCode  MatMPIDenseSetPreallocation_MPIDense(Mat mat,PetscScalar *data)
1509a23d5eceSKris Buschelman {
1510637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
1511637a0070SStefano Zampini   PetscBool      iscuda;
1512dfbe8321SBarry Smith   PetscErrorCode ierr;
1513a23d5eceSKris Buschelman 
1514a23d5eceSKris Buschelman   PetscFunctionBegin;
1515616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
151634ef9618SShri Abhyankar   ierr = PetscLayoutSetUp(mat->rmap);CHKERRQ(ierr);
151734ef9618SShri Abhyankar   ierr = PetscLayoutSetUp(mat->cmap);CHKERRQ(ierr);
1518637a0070SStefano Zampini   if (!a->A) {
1519f69a0ea3SMatthew Knepley     ierr = MatCreate(PETSC_COMM_SELF,&a->A);CHKERRQ(ierr);
15203bb1ff40SBarry Smith     ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A);CHKERRQ(ierr);
1521637a0070SStefano Zampini     ierr = MatSetSizes(a->A,mat->rmap->n,mat->cmap->N,mat->rmap->n,mat->cmap->N);CHKERRQ(ierr);
1522637a0070SStefano Zampini   }
1523637a0070SStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)mat,MATMPIDENSECUDA,&iscuda);CHKERRQ(ierr);
1524637a0070SStefano Zampini   ierr = MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE);CHKERRQ(ierr);
1525637a0070SStefano Zampini   ierr = MatSeqDenseSetPreallocation(a->A,data);CHKERRQ(ierr);
1526637a0070SStefano Zampini   mat->preallocated = PETSC_TRUE;
1527a23d5eceSKris Buschelman   PetscFunctionReturn(0);
1528a23d5eceSKris Buschelman }
1529a23d5eceSKris Buschelman 
153065b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
1531cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15328baccfbdSHong Zhang {
15338ea901baSHong Zhang   Mat            mat_elemental;
15348ea901baSHong Zhang   PetscErrorCode ierr;
153532d7a744SHong Zhang   PetscScalar    *v;
153632d7a744SHong Zhang   PetscInt       m=A->rmap->n,N=A->cmap->N,rstart=A->rmap->rstart,i,*rows,*cols;
15378ea901baSHong Zhang 
15388baccfbdSHong Zhang   PetscFunctionBegin;
1539378336b6SHong Zhang   if (reuse == MAT_REUSE_MATRIX) {
1540378336b6SHong Zhang     mat_elemental = *newmat;
1541378336b6SHong Zhang     ierr = MatZeroEntries(*newmat);CHKERRQ(ierr);
1542378336b6SHong Zhang   } else {
1543378336b6SHong Zhang     ierr = MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental);CHKERRQ(ierr);
1544378336b6SHong Zhang     ierr = MatSetSizes(mat_elemental,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
1545378336b6SHong Zhang     ierr = MatSetType(mat_elemental,MATELEMENTAL);CHKERRQ(ierr);
1546378336b6SHong Zhang     ierr = MatSetUp(mat_elemental);CHKERRQ(ierr);
154732d7a744SHong Zhang     ierr = MatSetOption(mat_elemental,MAT_ROW_ORIENTED,PETSC_FALSE);CHKERRQ(ierr);
1548378336b6SHong Zhang   }
1549378336b6SHong Zhang 
155032d7a744SHong Zhang   ierr = PetscMalloc2(m,&rows,N,&cols);CHKERRQ(ierr);
155132d7a744SHong Zhang   for (i=0; i<N; i++) cols[i] = i;
155232d7a744SHong Zhang   for (i=0; i<m; i++) rows[i] = rstart + i;
15538ea901baSHong Zhang 
1554637a0070SStefano Zampini   /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */
155532d7a744SHong Zhang   ierr = MatDenseGetArray(A,&v);CHKERRQ(ierr);
155632d7a744SHong Zhang   ierr = MatSetValues(mat_elemental,m,rows,N,cols,v,ADD_VALUES);CHKERRQ(ierr);
15578ea901baSHong Zhang   ierr = MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
15588ea901baSHong Zhang   ierr = MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
155932d7a744SHong Zhang   ierr = MatDenseRestoreArray(A,&v);CHKERRQ(ierr);
156032d7a744SHong Zhang   ierr = PetscFree2(rows,cols);CHKERRQ(ierr);
15618ea901baSHong Zhang 
1562511c6705SHong Zhang   if (reuse == MAT_INPLACE_MATRIX) {
156328be2f97SBarry Smith     ierr = MatHeaderReplace(A,&mat_elemental);CHKERRQ(ierr);
15648ea901baSHong Zhang   } else {
15658ea901baSHong Zhang     *newmat = mat_elemental;
15668ea901baSHong Zhang   }
15678baccfbdSHong Zhang   PetscFunctionReturn(0);
15688baccfbdSHong Zhang }
156965b80a83SHong Zhang #endif
15708baccfbdSHong Zhang 
1571af53bab2SHong Zhang static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A,PetscInt col,PetscScalar **vals)
157286aefd0dSHong Zhang {
157386aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
157486aefd0dSHong Zhang   PetscErrorCode ierr;
157586aefd0dSHong Zhang 
157686aefd0dSHong Zhang   PetscFunctionBegin;
157786aefd0dSHong Zhang   ierr = MatDenseGetColumn(mat->A,col,vals);CHKERRQ(ierr);
157886aefd0dSHong Zhang   PetscFunctionReturn(0);
157986aefd0dSHong Zhang }
158086aefd0dSHong Zhang 
1581af53bab2SHong Zhang static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A,PetscScalar **vals)
158286aefd0dSHong Zhang {
158386aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
158486aefd0dSHong Zhang   PetscErrorCode ierr;
158586aefd0dSHong Zhang 
158686aefd0dSHong Zhang   PetscFunctionBegin;
158786aefd0dSHong Zhang   ierr = MatDenseRestoreColumn(mat->A,vals);CHKERRQ(ierr);
158886aefd0dSHong Zhang   PetscFunctionReturn(0);
158986aefd0dSHong Zhang }
159086aefd0dSHong Zhang 
159194e2cb23SJakub Kruzik PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm,Mat inmat,PetscInt n,MatReuse scall,Mat *outmat)
159294e2cb23SJakub Kruzik {
159394e2cb23SJakub Kruzik   PetscErrorCode ierr;
159494e2cb23SJakub Kruzik   Mat_MPIDense   *mat;
159594e2cb23SJakub Kruzik   PetscInt       m,nloc,N;
159694e2cb23SJakub Kruzik 
159794e2cb23SJakub Kruzik   PetscFunctionBegin;
159894e2cb23SJakub Kruzik   ierr = MatGetSize(inmat,&m,&N);CHKERRQ(ierr);
159994e2cb23SJakub Kruzik   ierr = MatGetLocalSize(inmat,NULL,&nloc);CHKERRQ(ierr);
160094e2cb23SJakub Kruzik   if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */
160194e2cb23SJakub Kruzik     PetscInt sum;
160294e2cb23SJakub Kruzik 
160394e2cb23SJakub Kruzik     if (n == PETSC_DECIDE) {
160494e2cb23SJakub Kruzik       ierr = PetscSplitOwnership(comm,&n,&N);CHKERRQ(ierr);
160594e2cb23SJakub Kruzik     }
160694e2cb23SJakub Kruzik     /* Check sum(n) = N */
160794e2cb23SJakub Kruzik     ierr = MPIU_Allreduce(&n,&sum,1,MPIU_INT,MPI_SUM,comm);CHKERRQ(ierr);
160894e2cb23SJakub Kruzik     if (sum != N) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Sum of local columns %D != global columns %D",sum,N);
160994e2cb23SJakub Kruzik 
161094e2cb23SJakub Kruzik     ierr = MatCreateDense(comm,m,n,PETSC_DETERMINE,N,NULL,outmat);CHKERRQ(ierr);
161194e2cb23SJakub Kruzik   }
161294e2cb23SJakub Kruzik 
161394e2cb23SJakub Kruzik   /* numeric phase */
161494e2cb23SJakub Kruzik   mat = (Mat_MPIDense*)(*outmat)->data;
161594e2cb23SJakub Kruzik   ierr = MatCopy(inmat,mat->A,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
161694e2cb23SJakub Kruzik   ierr = MatAssemblyBegin(*outmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
161794e2cb23SJakub Kruzik   ierr = MatAssemblyEnd(*outmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
161894e2cb23SJakub Kruzik   PetscFunctionReturn(0);
161994e2cb23SJakub Kruzik }
162094e2cb23SJakub Kruzik 
1621637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1622637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDenseCUDA_MPIDense(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1623637a0070SStefano Zampini {
1624637a0070SStefano Zampini   Mat            B;
1625637a0070SStefano Zampini   Mat_MPIDense   *m;
1626637a0070SStefano Zampini   PetscErrorCode ierr;
1627637a0070SStefano Zampini 
1628637a0070SStefano Zampini   PetscFunctionBegin;
1629637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
1630637a0070SStefano Zampini     ierr = MatDuplicate(M,MAT_COPY_VALUES,newmat);CHKERRQ(ierr);
1631637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
1632637a0070SStefano Zampini     ierr = MatCopy(M,*newmat,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
1633637a0070SStefano Zampini   }
1634637a0070SStefano Zampini 
1635637a0070SStefano Zampini   B    = *newmat;
1636637a0070SStefano Zampini   ierr = MatBindToCPU_MPIDenseCUDA(B,PETSC_TRUE);CHKERRQ(ierr);
1637637a0070SStefano Zampini   ierr = PetscFree(B->defaultvectype);CHKERRQ(ierr);
1638637a0070SStefano Zampini   ierr = PetscStrallocpy(VECSTANDARD,&B->defaultvectype);CHKERRQ(ierr);
1639637a0070SStefano Zampini   ierr = PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSE);CHKERRQ(ierr);
1640637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",NULL);CHKERRQ(ierr);
1641637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",NULL);CHKERRQ(ierr);
16426718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",NULL);CHKERRQ(ierr);
1643637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",NULL);CHKERRQ(ierr);
16446718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",NULL);CHKERRQ(ierr);
1645637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",NULL);CHKERRQ(ierr);
1646637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",NULL);CHKERRQ(ierr);
1647637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",NULL);CHKERRQ(ierr);
1648637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",NULL);CHKERRQ(ierr);
1649637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",NULL);CHKERRQ(ierr);
1650637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",NULL);CHKERRQ(ierr);
1651637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",NULL);CHKERRQ(ierr);
1652637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",NULL);CHKERRQ(ierr);
1653d5ea218eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",NULL);CHKERRQ(ierr);
1654637a0070SStefano Zampini   m    = (Mat_MPIDense*)(B)->data;
1655637a0070SStefano Zampini   if (m->A) {
1656637a0070SStefano Zampini     ierr = MatConvert(m->A,MATSEQDENSE,MAT_INPLACE_MATRIX,&m->A);CHKERRQ(ierr);
1657637a0070SStefano Zampini     ierr = MatSetUpMultiply_MPIDense(B);CHKERRQ(ierr);
1658637a0070SStefano Zampini   }
1659637a0070SStefano Zampini   B->ops->bindtocpu = NULL;
1660637a0070SStefano Zampini   B->offloadmask    = PETSC_OFFLOAD_CPU;
1661637a0070SStefano Zampini   PetscFunctionReturn(0);
1662637a0070SStefano Zampini }
1663637a0070SStefano Zampini 
1664637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDense_MPIDenseCUDA(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1665637a0070SStefano Zampini {
1666637a0070SStefano Zampini   Mat            B;
1667637a0070SStefano Zampini   Mat_MPIDense   *m;
1668637a0070SStefano Zampini   PetscErrorCode ierr;
1669637a0070SStefano Zampini 
1670637a0070SStefano Zampini   PetscFunctionBegin;
1671637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
1672637a0070SStefano Zampini     ierr = MatDuplicate(M,MAT_COPY_VALUES,newmat);CHKERRQ(ierr);
1673637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
1674637a0070SStefano Zampini     ierr = MatCopy(M,*newmat,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
1675637a0070SStefano Zampini   }
1676637a0070SStefano Zampini 
1677637a0070SStefano Zampini   B    = *newmat;
1678637a0070SStefano Zampini   ierr = PetscFree(B->defaultvectype);CHKERRQ(ierr);
1679637a0070SStefano Zampini   ierr = PetscStrallocpy(VECCUDA,&B->defaultvectype);CHKERRQ(ierr);
1680637a0070SStefano Zampini   ierr = PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSECUDA);CHKERRQ(ierr);
1681637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",                    MatConvert_MPIDenseCUDA_MPIDense);CHKERRQ(ierr);
1682637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",        MatProductSetFromOptions_MPIAIJ_MPIDense);CHKERRQ(ierr);
16836718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",MatProductSetFromOptions_MPIAIJ_MPIDense);CHKERRQ(ierr);
1684637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",        MatProductSetFromOptions_MPIDense_MPIAIJ);CHKERRQ(ierr);
16856718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ);CHKERRQ(ierr);
1686637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",                                MatDenseCUDAGetArray_MPIDenseCUDA);CHKERRQ(ierr);
1687637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",                            MatDenseCUDAGetArrayRead_MPIDenseCUDA);CHKERRQ(ierr);
1688637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",                           MatDenseCUDAGetArrayWrite_MPIDenseCUDA);CHKERRQ(ierr);
1689637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",                            MatDenseCUDARestoreArray_MPIDenseCUDA);CHKERRQ(ierr);
1690637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",                        MatDenseCUDARestoreArrayRead_MPIDenseCUDA);CHKERRQ(ierr);
1691637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",                       MatDenseCUDARestoreArrayWrite_MPIDenseCUDA);CHKERRQ(ierr);
1692637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",                              MatDenseCUDAPlaceArray_MPIDenseCUDA);CHKERRQ(ierr);
1693637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",                              MatDenseCUDAResetArray_MPIDenseCUDA);CHKERRQ(ierr);
1694d5ea218eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",                            MatDenseCUDAReplaceArray_MPIDenseCUDA);CHKERRQ(ierr);
1695637a0070SStefano Zampini   m    = (Mat_MPIDense*)(B)->data;
1696637a0070SStefano Zampini   if (m->A) {
1697637a0070SStefano Zampini     ierr = MatConvert(m->A,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&m->A);CHKERRQ(ierr);
1698637a0070SStefano Zampini     ierr = MatSetUpMultiply_MPIDense(B);CHKERRQ(ierr);
1699637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_BOTH;
1700637a0070SStefano Zampini   } else {
1701637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_UNALLOCATED;
1702637a0070SStefano Zampini   }
1703637a0070SStefano Zampini   ierr = MatBindToCPU_MPIDenseCUDA(B,PETSC_FALSE);CHKERRQ(ierr);
1704637a0070SStefano Zampini 
1705637a0070SStefano Zampini   B->ops->bindtocpu = MatBindToCPU_MPIDenseCUDA;
1706637a0070SStefano Zampini   PetscFunctionReturn(0);
1707637a0070SStefano Zampini }
1708637a0070SStefano Zampini #endif
1709637a0070SStefano Zampini 
17106947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
17116947451fSStefano Zampini {
17126947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17136947451fSStefano Zampini   PetscErrorCode ierr;
17146947451fSStefano Zampini   PetscInt       lda;
17156947451fSStefano Zampini 
17166947451fSStefano Zampini   PetscFunctionBegin;
1717616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1718616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17196947451fSStefano Zampini   if (!a->cvec) {
17206947451fSStefano Zampini     ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
17216947451fSStefano Zampini   }
17226947451fSStefano Zampini   a->vecinuse = col + 1;
17236947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
17246947451fSStefano Zampini   ierr = MatDenseGetArray(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
17256947451fSStefano Zampini   ierr = VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
17266947451fSStefano Zampini   *v   = a->cvec;
17276947451fSStefano Zampini   PetscFunctionReturn(0);
17286947451fSStefano Zampini }
17296947451fSStefano Zampini 
17306947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
17316947451fSStefano Zampini {
17326947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17336947451fSStefano Zampini   PetscErrorCode ierr;
17346947451fSStefano Zampini 
17356947451fSStefano Zampini   PetscFunctionBegin;
17365ea7661aSPierre Jolivet   if (!a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
17376947451fSStefano Zampini   if (!a->cvec) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
17386947451fSStefano Zampini   a->vecinuse = 0;
17396947451fSStefano Zampini   ierr = MatDenseRestoreArray(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
17406947451fSStefano Zampini   ierr = VecResetArray(a->cvec);CHKERRQ(ierr);
17416947451fSStefano Zampini   *v   = NULL;
17426947451fSStefano Zampini   PetscFunctionReturn(0);
17436947451fSStefano Zampini }
17446947451fSStefano Zampini 
17456947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
17466947451fSStefano Zampini {
17476947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17486947451fSStefano Zampini   PetscErrorCode ierr;
17496947451fSStefano Zampini   PetscInt       lda;
17506947451fSStefano Zampini 
17516947451fSStefano Zampini   PetscFunctionBegin;
1752616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1753616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17546947451fSStefano Zampini   if (!a->cvec) {
17556947451fSStefano Zampini     ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
17566947451fSStefano Zampini   }
17576947451fSStefano Zampini   a->vecinuse = col + 1;
17586947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
17596947451fSStefano Zampini   ierr = MatDenseGetArrayRead(a->A,&a->ptrinuse);CHKERRQ(ierr);
17606947451fSStefano Zampini   ierr = VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
17616947451fSStefano Zampini   ierr = VecLockReadPush(a->cvec);CHKERRQ(ierr);
17626947451fSStefano Zampini   *v   = a->cvec;
17636947451fSStefano Zampini   PetscFunctionReturn(0);
17646947451fSStefano Zampini }
17656947451fSStefano Zampini 
17666947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
17676947451fSStefano Zampini {
17686947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17696947451fSStefano Zampini   PetscErrorCode ierr;
17706947451fSStefano Zampini 
17716947451fSStefano Zampini   PetscFunctionBegin;
1772616b8fbbSStefano Zampini   if (!a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
1773616b8fbbSStefano Zampini   if (!a->cvec) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
17746947451fSStefano Zampini   a->vecinuse = 0;
17756947451fSStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,&a->ptrinuse);CHKERRQ(ierr);
17766947451fSStefano Zampini   ierr = VecLockReadPop(a->cvec);CHKERRQ(ierr);
17776947451fSStefano Zampini   ierr = VecResetArray(a->cvec);CHKERRQ(ierr);
17786947451fSStefano Zampini   *v   = NULL;
17796947451fSStefano Zampini   PetscFunctionReturn(0);
17806947451fSStefano Zampini }
17816947451fSStefano Zampini 
17826947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
17836947451fSStefano Zampini {
17846947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17856947451fSStefano Zampini   PetscErrorCode ierr;
17866947451fSStefano Zampini   PetscInt       lda;
17876947451fSStefano Zampini 
17886947451fSStefano Zampini   PetscFunctionBegin;
1789616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1790616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17916947451fSStefano Zampini   if (!a->cvec) {
17926947451fSStefano Zampini     ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
17936947451fSStefano Zampini   }
17946947451fSStefano Zampini   a->vecinuse = col + 1;
17956947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
17966947451fSStefano Zampini   ierr = MatDenseGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
17976947451fSStefano Zampini   ierr = VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
17986947451fSStefano Zampini   *v   = a->cvec;
17996947451fSStefano Zampini   PetscFunctionReturn(0);
18006947451fSStefano Zampini }
18016947451fSStefano Zampini 
18026947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
18036947451fSStefano Zampini {
18046947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
18056947451fSStefano Zampini   PetscErrorCode ierr;
18066947451fSStefano Zampini 
18076947451fSStefano Zampini   PetscFunctionBegin;
1808616b8fbbSStefano Zampini   if (!a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
1809616b8fbbSStefano Zampini   if (!a->cvec) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
18106947451fSStefano Zampini   a->vecinuse = 0;
18116947451fSStefano Zampini   ierr = MatDenseRestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
18126947451fSStefano Zampini   ierr = VecResetArray(a->cvec);CHKERRQ(ierr);
18136947451fSStefano Zampini   *v   = NULL;
18146947451fSStefano Zampini   PetscFunctionReturn(0);
18156947451fSStefano Zampini }
18166947451fSStefano Zampini 
18175ea7661aSPierre Jolivet PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A,PetscInt cbegin,PetscInt cend,Mat *v)
18185ea7661aSPierre Jolivet {
18195ea7661aSPierre Jolivet   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
1820616b8fbbSStefano Zampini   Mat_MPIDense   *c;
18215ea7661aSPierre Jolivet   PetscErrorCode ierr;
1822616b8fbbSStefano Zampini   MPI_Comm       comm;
1823616b8fbbSStefano Zampini   PetscBool      setup = PETSC_FALSE;
18245ea7661aSPierre Jolivet 
18255ea7661aSPierre Jolivet   PetscFunctionBegin;
1826616b8fbbSStefano Zampini   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
1827616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1828616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18295ea7661aSPierre Jolivet   if (!a->cmat) {
1830616b8fbbSStefano Zampini     setup = PETSC_TRUE;
1831616b8fbbSStefano Zampini     ierr = MatCreate(comm,&a->cmat);CHKERRQ(ierr);
1832616b8fbbSStefano Zampini     ierr = PetscLogObjectParent((PetscObject)A,(PetscObject)a->cmat);CHKERRQ(ierr);
1833616b8fbbSStefano Zampini     ierr = MatSetType(a->cmat,((PetscObject)A)->type_name);CHKERRQ(ierr);
1834616b8fbbSStefano Zampini     ierr = PetscLayoutReference(A->rmap,&a->cmat->rmap);CHKERRQ(ierr);
1835616b8fbbSStefano Zampini     ierr = PetscLayoutSetSize(a->cmat->cmap,cend-cbegin);CHKERRQ(ierr);
1836616b8fbbSStefano Zampini     ierr = PetscLayoutSetUp(a->cmat->cmap);CHKERRQ(ierr);
1837616b8fbbSStefano Zampini   } else if (cend-cbegin != a->cmat->cmap->N) {
1838616b8fbbSStefano Zampini     setup = PETSC_TRUE;
1839616b8fbbSStefano Zampini     ierr = PetscLayoutDestroy(&a->cmat->cmap);CHKERRQ(ierr);
1840616b8fbbSStefano Zampini     ierr = PetscLayoutCreate(comm,&a->cmat->cmap);CHKERRQ(ierr);
1841616b8fbbSStefano Zampini     ierr = PetscLayoutSetSize(a->cmat->cmap,cend-cbegin);CHKERRQ(ierr);
1842616b8fbbSStefano Zampini     ierr = PetscLayoutSetUp(a->cmat->cmap);CHKERRQ(ierr);
18435ea7661aSPierre Jolivet   }
1844616b8fbbSStefano Zampini   c = (Mat_MPIDense*)a->cmat->data;
1845616b8fbbSStefano Zampini   if (c->A) SETERRQ(comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1846616b8fbbSStefano Zampini   ierr = MatDenseGetSubMatrix(a->A,cbegin,cend,&c->A);CHKERRQ(ierr);
1847616b8fbbSStefano Zampini   if (setup) { /* do we really need this? */
1848616b8fbbSStefano Zampini     ierr = MatSetUpMultiply_MPIDense(a->cmat);CHKERRQ(ierr);
1849616b8fbbSStefano Zampini   }
1850616b8fbbSStefano Zampini   a->cmat->preallocated = PETSC_TRUE;
1851616b8fbbSStefano Zampini   a->cmat->assembled = PETSC_TRUE;
18525ea7661aSPierre Jolivet   a->matinuse = cbegin + 1;
18535ea7661aSPierre Jolivet   *v = a->cmat;
18545ea7661aSPierre Jolivet   PetscFunctionReturn(0);
18555ea7661aSPierre Jolivet }
18565ea7661aSPierre Jolivet 
18575ea7661aSPierre Jolivet PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A,Mat *v)
18585ea7661aSPierre Jolivet {
18595ea7661aSPierre Jolivet   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
1860616b8fbbSStefano Zampini   Mat_MPIDense   *c;
18615ea7661aSPierre Jolivet   PetscErrorCode ierr;
18625ea7661aSPierre Jolivet 
18635ea7661aSPierre Jolivet   PetscFunctionBegin;
1864616b8fbbSStefano Zampini   if (!a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetSubMatrix() first");
1865616b8fbbSStefano Zampini   if (!a->cmat) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal matrix");
1866616b8fbbSStefano Zampini   if (*v != a->cmat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Not the matrix obtained from MatDenseGetSubMatrix()");
18675ea7661aSPierre Jolivet   a->matinuse = 0;
1868616b8fbbSStefano Zampini   c    = (Mat_MPIDense*)a->cmat->data;
1869616b8fbbSStefano Zampini   ierr = MatDenseRestoreSubMatrix(a->A,&c->A);CHKERRQ(ierr);
18705ea7661aSPierre Jolivet   *v   = NULL;
18715ea7661aSPierre Jolivet   PetscFunctionReturn(0);
18725ea7661aSPierre Jolivet }
18735ea7661aSPierre Jolivet 
1874002bc6daSRichard Tran Mills /*MC
1875002bc6daSRichard Tran Mills    MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices.
1876002bc6daSRichard Tran Mills 
1877002bc6daSRichard Tran Mills    Options Database Keys:
1878002bc6daSRichard Tran Mills . -mat_type mpidense - sets the matrix type to "mpidense" during a call to MatSetFromOptions()
1879002bc6daSRichard Tran Mills 
1880002bc6daSRichard Tran Mills   Level: beginner
1881002bc6daSRichard Tran Mills 
1882002bc6daSRichard Tran Mills .seealso: MatCreateDense()
1883002bc6daSRichard Tran Mills 
1884002bc6daSRichard Tran Mills M*/
18858cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreate_MPIDense(Mat mat)
1886273d9f13SBarry Smith {
1887273d9f13SBarry Smith   Mat_MPIDense   *a;
1888dfbe8321SBarry Smith   PetscErrorCode ierr;
1889273d9f13SBarry Smith 
1890273d9f13SBarry Smith   PetscFunctionBegin;
1891b00a9115SJed Brown   ierr      = PetscNewLog(mat,&a);CHKERRQ(ierr);
1892b0a32e0cSBarry Smith   mat->data = (void*)a;
1893273d9f13SBarry Smith   ierr      = PetscMemcpy(mat->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1894273d9f13SBarry Smith 
1895273d9f13SBarry Smith   mat->insertmode = NOT_SET_VALUES;
1896273d9f13SBarry Smith 
1897273d9f13SBarry Smith   /* build cache for off array entries formed */
1898273d9f13SBarry Smith   a->donotstash = PETSC_FALSE;
18992205254eSKarl Rupp 
1900ce94432eSBarry Smith   ierr = MatStashCreate_Private(PetscObjectComm((PetscObject)mat),1,&mat->stash);CHKERRQ(ierr);
1901273d9f13SBarry Smith 
1902273d9f13SBarry Smith   /* stuff used for matrix vector multiply */
1903f4259b30SLisandro Dalcin   a->lvec        = NULL;
1904f4259b30SLisandro Dalcin   a->Mvctx       = NULL;
1905273d9f13SBarry Smith   a->roworiented = PETSC_TRUE;
1906273d9f13SBarry Smith 
190749a6ff4bSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",MatDenseGetLDA_MPIDense);CHKERRQ(ierr);
1908ad16ce7aSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",MatDenseSetLDA_MPIDense);CHKERRQ(ierr);
1909bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",MatDenseGetArray_MPIDense);CHKERRQ(ierr);
19108572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",MatDenseRestoreArray_MPIDense);CHKERRQ(ierr);
19118572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",MatDenseGetArrayRead_MPIDense);CHKERRQ(ierr);
19128572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",MatDenseRestoreArrayRead_MPIDense);CHKERRQ(ierr);
19136947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",MatDenseGetArrayWrite_MPIDense);CHKERRQ(ierr);
19146947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",MatDenseRestoreArrayWrite_MPIDense);CHKERRQ(ierr);
1915d3042a70SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",MatDensePlaceArray_MPIDense);CHKERRQ(ierr);
1916d3042a70SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",MatDenseResetArray_MPIDense);CHKERRQ(ierr);
1917d5ea218eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",MatDenseReplaceArray_MPIDense);CHKERRQ(ierr);
19186947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense);CHKERRQ(ierr);
19196947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense);CHKERRQ(ierr);
19206947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense);CHKERRQ(ierr);
19216947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense);CHKERRQ(ierr);
19226947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense);CHKERRQ(ierr);
19236947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense);CHKERRQ(ierr);
19245ea7661aSPierre Jolivet   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",MatDenseGetSubMatrix_MPIDense);CHKERRQ(ierr);
19255ea7661aSPierre Jolivet   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",MatDenseRestoreSubMatrix_MPIDense);CHKERRQ(ierr);
19268baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
19278baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",MatConvert_MPIDense_Elemental);CHKERRQ(ierr);
19288baccfbdSHong Zhang #endif
1929d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
1930d24d4204SJose E. Roman   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",MatConvert_Dense_ScaLAPACK);CHKERRQ(ierr);
1931d24d4204SJose E. Roman #endif
1932637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1933637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpidensecuda_C",MatConvert_MPIDense_MPIDenseCUDA);CHKERRQ(ierr);
1934637a0070SStefano Zampini #endif
1935bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",MatMPIDenseSetPreallocation_MPIDense);CHKERRQ(ierr);
19364222ddf1SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense);CHKERRQ(ierr);
19374222ddf1SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",MatProductSetFromOptions_MPIDense_MPIAIJ);CHKERRQ(ierr);
19386718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
19396718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense);CHKERRQ(ierr);
19406718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ);CHKERRQ(ierr);
19416718818eSStefano Zampini #endif
19428949adfdSHong Zhang 
1943af53bab2SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",MatDenseGetColumn_MPIDense);CHKERRQ(ierr);
1944af53bab2SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",MatDenseRestoreColumn_MPIDense);CHKERRQ(ierr);
194538aed534SBarry Smith   ierr = PetscObjectChangeTypeName((PetscObject)mat,MATMPIDENSE);CHKERRQ(ierr);
1946273d9f13SBarry Smith   PetscFunctionReturn(0);
1947273d9f13SBarry Smith }
1948273d9f13SBarry Smith 
1949209238afSKris Buschelman /*MC
1950637a0070SStefano Zampini    MATMPIDENSECUDA - MATMPIDENSECUDA = "mpidensecuda" - A matrix type to be used for distributed dense matrices on GPUs.
1951637a0070SStefano Zampini 
1952637a0070SStefano Zampini    Options Database Keys:
1953637a0070SStefano Zampini . -mat_type mpidensecuda - sets the matrix type to "mpidensecuda" during a call to MatSetFromOptions()
1954637a0070SStefano Zampini 
1955637a0070SStefano Zampini   Level: beginner
1956637a0070SStefano Zampini 
1957637a0070SStefano Zampini .seealso:
1958637a0070SStefano Zampini 
1959637a0070SStefano Zampini M*/
1960637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1961637a0070SStefano Zampini PETSC_EXTERN PetscErrorCode MatCreate_MPIDenseCUDA(Mat B)
1962637a0070SStefano Zampini {
1963637a0070SStefano Zampini   PetscErrorCode ierr;
1964637a0070SStefano Zampini 
1965637a0070SStefano Zampini   PetscFunctionBegin;
196605035670SJunchao Zhang   ierr = PetscCUDAInitializeCheck();CHKERRQ(ierr);
1967637a0070SStefano Zampini   ierr = MatCreate_MPIDense(B);CHKERRQ(ierr);
1968637a0070SStefano Zampini   ierr = MatConvert_MPIDense_MPIDenseCUDA(B,MATMPIDENSECUDA,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr);
1969637a0070SStefano Zampini   PetscFunctionReturn(0);
1970637a0070SStefano Zampini }
1971637a0070SStefano Zampini #endif
1972637a0070SStefano Zampini 
1973637a0070SStefano Zampini /*MC
1974002d173eSKris Buschelman    MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices.
1975209238afSKris Buschelman 
1976209238afSKris Buschelman    This matrix type is identical to MATSEQDENSE when constructed with a single process communicator,
1977209238afSKris Buschelman    and MATMPIDENSE otherwise.
1978209238afSKris Buschelman 
1979209238afSKris Buschelman    Options Database Keys:
1980209238afSKris Buschelman . -mat_type dense - sets the matrix type to "dense" during a call to MatSetFromOptions()
1981209238afSKris Buschelman 
1982209238afSKris Buschelman   Level: beginner
1983209238afSKris Buschelman 
198401b82886SBarry Smith 
19856947451fSStefano Zampini .seealso: MATSEQDENSE,MATMPIDENSE,MATDENSECUDA
19866947451fSStefano Zampini M*/
19876947451fSStefano Zampini 
19886947451fSStefano Zampini /*MC
19896947451fSStefano Zampini    MATDENSECUDA - MATDENSECUDA = "densecuda" - A matrix type to be used for dense matrices on GPUs.
19906947451fSStefano Zampini 
19916947451fSStefano Zampini    This matrix type is identical to MATSEQDENSECUDA when constructed with a single process communicator,
19926947451fSStefano Zampini    and MATMPIDENSECUDA otherwise.
19936947451fSStefano Zampini 
19946947451fSStefano Zampini    Options Database Keys:
19956947451fSStefano Zampini . -mat_type densecuda - sets the matrix type to "densecuda" during a call to MatSetFromOptions()
19966947451fSStefano Zampini 
19976947451fSStefano Zampini   Level: beginner
19986947451fSStefano Zampini 
19996947451fSStefano Zampini .seealso: MATSEQDENSECUDA,MATMPIDENSECUDA,MATDENSE
2000209238afSKris Buschelman M*/
2001209238afSKris Buschelman 
2002273d9f13SBarry Smith /*@C
2003273d9f13SBarry Smith    MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries
2004273d9f13SBarry Smith 
20058f490ea3SStefano Zampini    Collective
2006273d9f13SBarry Smith 
2007273d9f13SBarry Smith    Input Parameters:
20081c4f3114SJed Brown .  B - the matrix
20090298fd71SBarry Smith -  data - optional location of matrix data.  Set data=NULL for PETSc
2010273d9f13SBarry Smith    to control all matrix memory allocation.
2011273d9f13SBarry Smith 
2012273d9f13SBarry Smith    Notes:
2013273d9f13SBarry Smith    The dense format is fully compatible with standard Fortran 77
2014273d9f13SBarry Smith    storage by columns.
2015273d9f13SBarry Smith 
2016273d9f13SBarry Smith    The data input variable is intended primarily for Fortran programmers
2017273d9f13SBarry Smith    who wish to allocate their own matrix memory space.  Most users should
20180298fd71SBarry Smith    set data=NULL.
2019273d9f13SBarry Smith 
2020273d9f13SBarry Smith    Level: intermediate
2021273d9f13SBarry Smith 
2022273d9f13SBarry Smith .seealso: MatCreate(), MatCreateSeqDense(), MatSetValues()
2023273d9f13SBarry Smith @*/
20241c4f3114SJed Brown PetscErrorCode  MatMPIDenseSetPreallocation(Mat B,PetscScalar *data)
2025273d9f13SBarry Smith {
20264ac538c5SBarry Smith   PetscErrorCode ierr;
2027273d9f13SBarry Smith 
2028273d9f13SBarry Smith   PetscFunctionBegin;
2029d5ea218eSStefano Zampini   PetscValidHeaderSpecific(B,MAT_CLASSID,1);
20301c4f3114SJed Brown   ierr = PetscTryMethod(B,"MatMPIDenseSetPreallocation_C",(Mat,PetscScalar*),(B,data));CHKERRQ(ierr);
2031273d9f13SBarry Smith   PetscFunctionReturn(0);
2032273d9f13SBarry Smith }
2033273d9f13SBarry Smith 
2034d3042a70SBarry Smith /*@
2035637a0070SStefano Zampini    MatDensePlaceArray - Allows one to replace the array in a dense matrix with an
2036d3042a70SBarry Smith    array provided by the user. This is useful to avoid copying an array
2037d3042a70SBarry Smith    into a matrix
2038d3042a70SBarry Smith 
2039d3042a70SBarry Smith    Not Collective
2040d3042a70SBarry Smith 
2041d3042a70SBarry Smith    Input Parameters:
2042d3042a70SBarry Smith +  mat - the matrix
2043d3042a70SBarry Smith -  array - the array in column major order
2044d3042a70SBarry Smith 
2045d3042a70SBarry Smith    Notes:
2046d3042a70SBarry Smith    You can return to the original array with a call to MatDenseResetArray(). The user is responsible for freeing this array; it will not be
2047d3042a70SBarry Smith    freed when the matrix is destroyed.
2048d3042a70SBarry Smith 
2049d3042a70SBarry Smith    Level: developer
2050d3042a70SBarry Smith 
2051d3042a70SBarry Smith .seealso: MatDenseGetArray(), MatDenseResetArray(), VecPlaceArray(), VecGetArray(), VecRestoreArray(), VecReplaceArray(), VecResetArray()
2052d3042a70SBarry Smith 
2053d3042a70SBarry Smith @*/
2054637a0070SStefano Zampini PetscErrorCode  MatDensePlaceArray(Mat mat,const PetscScalar *array)
2055d3042a70SBarry Smith {
2056d3042a70SBarry Smith   PetscErrorCode ierr;
2057637a0070SStefano Zampini 
2058d3042a70SBarry Smith   PetscFunctionBegin;
2059d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2060d3042a70SBarry Smith   ierr = PetscUseMethod(mat,"MatDensePlaceArray_C",(Mat,const PetscScalar*),(mat,array));CHKERRQ(ierr);
2061d3042a70SBarry Smith   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2062637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2063637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2064637a0070SStefano Zampini #endif
2065d3042a70SBarry Smith   PetscFunctionReturn(0);
2066d3042a70SBarry Smith }
2067d3042a70SBarry Smith 
2068d3042a70SBarry Smith /*@
2069d3042a70SBarry Smith    MatDenseResetArray - Resets the matrix array to that it previously had before the call to MatDensePlaceArray()
2070d3042a70SBarry Smith 
2071d3042a70SBarry Smith    Not Collective
2072d3042a70SBarry Smith 
2073d3042a70SBarry Smith    Input Parameters:
2074d3042a70SBarry Smith .  mat - the matrix
2075d3042a70SBarry Smith 
2076d3042a70SBarry Smith    Notes:
2077d3042a70SBarry Smith    You can only call this after a call to MatDensePlaceArray()
2078d3042a70SBarry Smith 
2079d3042a70SBarry Smith    Level: developer
2080d3042a70SBarry Smith 
2081d3042a70SBarry Smith .seealso: MatDenseGetArray(), MatDensePlaceArray(), VecPlaceArray(), VecGetArray(), VecRestoreArray(), VecReplaceArray(), VecResetArray()
2082d3042a70SBarry Smith 
2083d3042a70SBarry Smith @*/
2084d3042a70SBarry Smith PetscErrorCode  MatDenseResetArray(Mat mat)
2085d3042a70SBarry Smith {
2086d3042a70SBarry Smith   PetscErrorCode ierr;
2087637a0070SStefano Zampini 
2088d3042a70SBarry Smith   PetscFunctionBegin;
2089d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2090d3042a70SBarry Smith   ierr = PetscUseMethod(mat,"MatDenseResetArray_C",(Mat),(mat));CHKERRQ(ierr);
2091d3042a70SBarry Smith   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2092d3042a70SBarry Smith   PetscFunctionReturn(0);
2093d3042a70SBarry Smith }
2094d3042a70SBarry Smith 
2095d5ea218eSStefano Zampini /*@
2096d5ea218eSStefano Zampini    MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an
2097d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2098d5ea218eSStefano Zampini    into a matrix
2099d5ea218eSStefano Zampini 
2100d5ea218eSStefano Zampini    Not Collective
2101d5ea218eSStefano Zampini 
2102d5ea218eSStefano Zampini    Input Parameters:
2103d5ea218eSStefano Zampini +  mat - the matrix
2104d5ea218eSStefano Zampini -  array - the array in column major order
2105d5ea218eSStefano Zampini 
2106d5ea218eSStefano Zampini    Notes:
2107d5ea218eSStefano Zampini    The memory passed in MUST be obtained with PetscMalloc() and CANNOT be
2108d5ea218eSStefano Zampini    freed by the user. It will be freed when the matrix is destroyed.
2109d5ea218eSStefano Zampini 
2110d5ea218eSStefano Zampini    Level: developer
2111d5ea218eSStefano Zampini 
2112d5ea218eSStefano Zampini .seealso: MatDenseGetArray(), VecReplaceArray()
2113d5ea218eSStefano Zampini @*/
2114d5ea218eSStefano Zampini PetscErrorCode  MatDenseReplaceArray(Mat mat,const PetscScalar *array)
2115d5ea218eSStefano Zampini {
2116d5ea218eSStefano Zampini   PetscErrorCode ierr;
2117d5ea218eSStefano Zampini 
2118d5ea218eSStefano Zampini   PetscFunctionBegin;
2119d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2120d5ea218eSStefano Zampini   ierr = PetscUseMethod(mat,"MatDenseReplaceArray_C",(Mat,const PetscScalar*),(mat,array));CHKERRQ(ierr);
2121d5ea218eSStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2122d5ea218eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
2123d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2124d5ea218eSStefano Zampini #endif
2125d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2126d5ea218eSStefano Zampini }
2127d5ea218eSStefano Zampini 
2128637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
21298965ea79SLois Curfman McInnes /*@C
2130637a0070SStefano Zampini    MatDenseCUDAPlaceArray - Allows one to replace the GPU array in a dense matrix with an
2131637a0070SStefano Zampini    array provided by the user. This is useful to avoid copying an array
2132637a0070SStefano Zampini    into a matrix
2133637a0070SStefano Zampini 
2134637a0070SStefano Zampini    Not Collective
2135637a0070SStefano Zampini 
2136637a0070SStefano Zampini    Input Parameters:
2137637a0070SStefano Zampini +  mat - the matrix
2138637a0070SStefano Zampini -  array - the array in column major order
2139637a0070SStefano Zampini 
2140637a0070SStefano Zampini    Notes:
2141637a0070SStefano Zampini    You can return to the original array with a call to MatDenseCUDAResetArray(). The user is responsible for freeing this array; it will not be
2142637a0070SStefano Zampini    freed when the matrix is destroyed. The array must have been allocated with cudaMalloc().
2143637a0070SStefano Zampini 
2144637a0070SStefano Zampini    Level: developer
2145637a0070SStefano Zampini 
2146637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAResetArray()
2147637a0070SStefano Zampini @*/
2148637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAPlaceArray(Mat mat,const PetscScalar *array)
2149637a0070SStefano Zampini {
2150637a0070SStefano Zampini   PetscErrorCode ierr;
2151637a0070SStefano Zampini 
2152637a0070SStefano Zampini   PetscFunctionBegin;
2153d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2154637a0070SStefano Zampini   ierr = PetscUseMethod(mat,"MatDenseCUDAPlaceArray_C",(Mat,const PetscScalar*),(mat,array));CHKERRQ(ierr);
2155637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2156637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2157637a0070SStefano Zampini   PetscFunctionReturn(0);
2158637a0070SStefano Zampini }
2159637a0070SStefano Zampini 
2160637a0070SStefano Zampini /*@C
2161637a0070SStefano Zampini    MatDenseCUDAResetArray - Resets the matrix array to that it previously had before the call to MatDenseCUDAPlaceArray()
2162637a0070SStefano Zampini 
2163637a0070SStefano Zampini    Not Collective
2164637a0070SStefano Zampini 
2165637a0070SStefano Zampini    Input Parameters:
2166637a0070SStefano Zampini .  mat - the matrix
2167637a0070SStefano Zampini 
2168637a0070SStefano Zampini    Notes:
2169637a0070SStefano Zampini    You can only call this after a call to MatDenseCUDAPlaceArray()
2170637a0070SStefano Zampini 
2171637a0070SStefano Zampini    Level: developer
2172637a0070SStefano Zampini 
2173637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAPlaceArray()
2174637a0070SStefano Zampini 
2175637a0070SStefano Zampini @*/
2176637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAResetArray(Mat mat)
2177637a0070SStefano Zampini {
2178637a0070SStefano Zampini   PetscErrorCode ierr;
2179637a0070SStefano Zampini 
2180637a0070SStefano Zampini   PetscFunctionBegin;
2181d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2182637a0070SStefano Zampini   ierr = PetscUseMethod(mat,"MatDenseCUDAResetArray_C",(Mat),(mat));CHKERRQ(ierr);
2183637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2184637a0070SStefano Zampini   PetscFunctionReturn(0);
2185637a0070SStefano Zampini }
2186637a0070SStefano Zampini 
2187637a0070SStefano Zampini /*@C
2188d5ea218eSStefano Zampini    MatDenseCUDAReplaceArray - Allows one to replace the GPU array in a dense matrix with an
2189d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2190d5ea218eSStefano Zampini    into a matrix
2191d5ea218eSStefano Zampini 
2192d5ea218eSStefano Zampini    Not Collective
2193d5ea218eSStefano Zampini 
2194d5ea218eSStefano Zampini    Input Parameters:
2195d5ea218eSStefano Zampini +  mat - the matrix
2196d5ea218eSStefano Zampini -  array - the array in column major order
2197d5ea218eSStefano Zampini 
2198d5ea218eSStefano Zampini    Notes:
2199d5ea218eSStefano Zampini    This permanently replaces the GPU array and frees the memory associated with the old GPU array.
2200d5ea218eSStefano Zampini    The memory passed in CANNOT be freed by the user. It will be freed
2201d5ea218eSStefano Zampini    when the matrix is destroyed. The array should respect the matrix leading dimension.
2202d5ea218eSStefano Zampini 
2203d5ea218eSStefano Zampini    Level: developer
2204d5ea218eSStefano Zampini 
2205d5ea218eSStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAPlaceArray(), MatDenseCUDAResetArray()
2206d5ea218eSStefano Zampini @*/
2207d5ea218eSStefano Zampini PetscErrorCode  MatDenseCUDAReplaceArray(Mat mat,const PetscScalar *array)
2208d5ea218eSStefano Zampini {
2209d5ea218eSStefano Zampini   PetscErrorCode ierr;
2210d5ea218eSStefano Zampini 
2211d5ea218eSStefano Zampini   PetscFunctionBegin;
2212d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2213d5ea218eSStefano Zampini   ierr = PetscUseMethod(mat,"MatDenseCUDAReplaceArray_C",(Mat,const PetscScalar*),(mat,array));CHKERRQ(ierr);
2214d5ea218eSStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2215d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2216d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2217d5ea218eSStefano Zampini }
2218d5ea218eSStefano Zampini 
2219d5ea218eSStefano Zampini /*@C
2220637a0070SStefano Zampini    MatDenseCUDAGetArrayWrite - Provides write access to the CUDA buffer inside a dense matrix.
2221637a0070SStefano Zampini 
2222637a0070SStefano Zampini    Not Collective
2223637a0070SStefano Zampini 
2224637a0070SStefano Zampini    Input Parameters:
2225637a0070SStefano Zampini .  A - the matrix
2226637a0070SStefano Zampini 
2227637a0070SStefano Zampini    Output Parameters
2228637a0070SStefano Zampini .  array - the GPU array in column major order
2229637a0070SStefano Zampini 
2230637a0070SStefano Zampini    Notes:
2231637a0070SStefano Zampini    The data on the GPU may not be updated due to operations done on the CPU. If you need updated data, use MatDenseCUDAGetArray(). The array must be restored with MatDenseCUDARestoreArrayWrite() when no longer needed.
2232637a0070SStefano Zampini 
2233637a0070SStefano Zampini    Level: developer
2234637a0070SStefano Zampini 
2235637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayRead(), MatDenseCUDARestoreArrayRead()
2236637a0070SStefano Zampini @*/
2237637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayWrite(Mat A, PetscScalar **a)
2238637a0070SStefano Zampini {
2239637a0070SStefano Zampini   PetscErrorCode ierr;
2240637a0070SStefano Zampini 
2241637a0070SStefano Zampini   PetscFunctionBegin;
2242d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2243637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDAGetArrayWrite_C",(Mat,PetscScalar**),(A,a));CHKERRQ(ierr);
2244637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr);
2245637a0070SStefano Zampini   PetscFunctionReturn(0);
2246637a0070SStefano Zampini }
2247637a0070SStefano Zampini 
2248637a0070SStefano Zampini /*@C
2249637a0070SStefano Zampini    MatDenseCUDARestoreArrayWrite - Restore write access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArrayWrite().
2250637a0070SStefano Zampini 
2251637a0070SStefano Zampini    Not Collective
2252637a0070SStefano Zampini 
2253637a0070SStefano Zampini    Input Parameters:
2254637a0070SStefano Zampini +  A - the matrix
2255637a0070SStefano Zampini -  array - the GPU array in column major order
2256637a0070SStefano Zampini 
2257637a0070SStefano Zampini    Notes:
2258637a0070SStefano Zampini 
2259637a0070SStefano Zampini    Level: developer
2260637a0070SStefano Zampini 
2261637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead(), MatDenseCUDAGetArrayRead()
2262637a0070SStefano Zampini @*/
2263637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayWrite(Mat A, PetscScalar **a)
2264637a0070SStefano Zampini {
2265637a0070SStefano Zampini   PetscErrorCode ierr;
2266637a0070SStefano Zampini 
2267637a0070SStefano Zampini   PetscFunctionBegin;
2268d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2269637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDARestoreArrayWrite_C",(Mat,PetscScalar**),(A,a));CHKERRQ(ierr);
2270637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr);
2271637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2272637a0070SStefano Zampini   PetscFunctionReturn(0);
2273637a0070SStefano Zampini }
2274637a0070SStefano Zampini 
2275637a0070SStefano Zampini /*@C
2276637a0070SStefano Zampini    MatDenseCUDAGetArrayRead - Provides read-only access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArrayRead() when no longer needed.
2277637a0070SStefano Zampini 
2278637a0070SStefano Zampini    Not Collective
2279637a0070SStefano Zampini 
2280637a0070SStefano Zampini    Input Parameters:
2281637a0070SStefano Zampini .  A - the matrix
2282637a0070SStefano Zampini 
2283637a0070SStefano Zampini    Output Parameters
2284637a0070SStefano Zampini .  array - the GPU array in column major order
2285637a0070SStefano Zampini 
2286637a0070SStefano Zampini    Notes:
2287637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2288637a0070SStefano Zampini 
2289637a0070SStefano Zampini    Level: developer
2290637a0070SStefano Zampini 
2291637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead()
2292637a0070SStefano Zampini @*/
2293637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayRead(Mat A, const PetscScalar **a)
2294637a0070SStefano Zampini {
2295637a0070SStefano Zampini   PetscErrorCode ierr;
2296637a0070SStefano Zampini 
2297637a0070SStefano Zampini   PetscFunctionBegin;
2298d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2299637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDAGetArrayRead_C",(Mat,const PetscScalar**),(A,a));CHKERRQ(ierr);
2300637a0070SStefano Zampini   PetscFunctionReturn(0);
2301637a0070SStefano Zampini }
2302637a0070SStefano Zampini 
2303637a0070SStefano Zampini /*@C
2304637a0070SStefano Zampini    MatDenseCUDARestoreArrayRead - Restore read-only access to the CUDA buffer inside a dense matrix previously obtained with a call to MatDenseCUDAGetArrayRead().
2305637a0070SStefano Zampini 
2306637a0070SStefano Zampini    Not Collective
2307637a0070SStefano Zampini 
2308637a0070SStefano Zampini    Input Parameters:
2309637a0070SStefano Zampini +  A - the matrix
2310637a0070SStefano Zampini -  array - the GPU array in column major order
2311637a0070SStefano Zampini 
2312637a0070SStefano Zampini    Notes:
2313637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2314637a0070SStefano Zampini 
2315637a0070SStefano Zampini    Level: developer
2316637a0070SStefano Zampini 
2317637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDAGetArrayRead()
2318637a0070SStefano Zampini @*/
2319637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayRead(Mat A, const PetscScalar **a)
2320637a0070SStefano Zampini {
2321637a0070SStefano Zampini   PetscErrorCode ierr;
2322637a0070SStefano Zampini 
2323637a0070SStefano Zampini   PetscFunctionBegin;
2324637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDARestoreArrayRead_C",(Mat,const PetscScalar**),(A,a));CHKERRQ(ierr);
2325637a0070SStefano Zampini   PetscFunctionReturn(0);
2326637a0070SStefano Zampini }
2327637a0070SStefano Zampini 
2328637a0070SStefano Zampini /*@C
2329637a0070SStefano Zampini    MatDenseCUDAGetArray - Provides access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArray() when no longer needed.
2330637a0070SStefano Zampini 
2331637a0070SStefano Zampini    Not Collective
2332637a0070SStefano Zampini 
2333637a0070SStefano Zampini    Input Parameters:
2334637a0070SStefano Zampini .  A - the matrix
2335637a0070SStefano Zampini 
2336637a0070SStefano Zampini    Output Parameters
2337637a0070SStefano Zampini .  array - the GPU array in column major order
2338637a0070SStefano Zampini 
2339637a0070SStefano Zampini    Notes:
2340637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite(). For read-only access, use MatDenseCUDAGetArrayRead().
2341637a0070SStefano Zampini 
2342637a0070SStefano Zampini    Level: developer
2343637a0070SStefano Zampini 
2344637a0070SStefano Zampini .seealso: MatDenseCUDAGetArrayRead(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead()
2345637a0070SStefano Zampini @*/
2346637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArray(Mat A, PetscScalar **a)
2347637a0070SStefano Zampini {
2348637a0070SStefano Zampini   PetscErrorCode ierr;
2349637a0070SStefano Zampini 
2350637a0070SStefano Zampini   PetscFunctionBegin;
2351d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2352637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDAGetArray_C",(Mat,PetscScalar**),(A,a));CHKERRQ(ierr);
2353637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr);
2354637a0070SStefano Zampini   PetscFunctionReturn(0);
2355637a0070SStefano Zampini }
2356637a0070SStefano Zampini 
2357637a0070SStefano Zampini /*@C
2358637a0070SStefano Zampini    MatDenseCUDARestoreArray - Restore access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArray().
2359637a0070SStefano Zampini 
2360637a0070SStefano Zampini    Not Collective
2361637a0070SStefano Zampini 
2362637a0070SStefano Zampini    Input Parameters:
2363637a0070SStefano Zampini +  A - the matrix
2364637a0070SStefano Zampini -  array - the GPU array in column major order
2365637a0070SStefano Zampini 
2366637a0070SStefano Zampini    Notes:
2367637a0070SStefano Zampini 
2368637a0070SStefano Zampini    Level: developer
2369637a0070SStefano Zampini 
2370637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead(), MatDenseCUDAGetArrayRead()
2371637a0070SStefano Zampini @*/
2372637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArray(Mat A, PetscScalar **a)
2373637a0070SStefano Zampini {
2374637a0070SStefano Zampini   PetscErrorCode ierr;
2375637a0070SStefano Zampini 
2376637a0070SStefano Zampini   PetscFunctionBegin;
2377d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2378637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDARestoreArray_C",(Mat,PetscScalar**),(A,a));CHKERRQ(ierr);
2379637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr);
2380637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2381637a0070SStefano Zampini   PetscFunctionReturn(0);
2382637a0070SStefano Zampini }
2383637a0070SStefano Zampini #endif
2384637a0070SStefano Zampini 
2385637a0070SStefano Zampini /*@C
2386637a0070SStefano Zampini    MatCreateDense - Creates a matrix in dense format.
23878965ea79SLois Curfman McInnes 
2388d083f849SBarry Smith    Collective
2389db81eaa0SLois Curfman McInnes 
23908965ea79SLois Curfman McInnes    Input Parameters:
2391db81eaa0SLois Curfman McInnes +  comm - MPI communicator
23928965ea79SLois Curfman McInnes .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2393db81eaa0SLois Curfman McInnes .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
23948965ea79SLois Curfman McInnes .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2395db81eaa0SLois Curfman McInnes .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
23966cfe35ddSJose E. Roman -  data - optional location of matrix data.  Set data=NULL (PETSC_NULL_SCALAR for Fortran users) for PETSc
2397dfc5480cSLois Curfman McInnes    to control all matrix memory allocation.
23988965ea79SLois Curfman McInnes 
23998965ea79SLois Curfman McInnes    Output Parameter:
2400477f1c0bSLois Curfman McInnes .  A - the matrix
24018965ea79SLois Curfman McInnes 
2402b259b22eSLois Curfman McInnes    Notes:
240339ddd567SLois Curfman McInnes    The dense format is fully compatible with standard Fortran 77
240439ddd567SLois Curfman McInnes    storage by columns.
2405002bc6daSRichard Tran Mills    Note that, although local portions of the matrix are stored in column-major
2406002bc6daSRichard Tran Mills    order, the matrix is partitioned across MPI ranks by row.
24078965ea79SLois Curfman McInnes 
240818f449edSLois Curfman McInnes    The data input variable is intended primarily for Fortran programmers
240918f449edSLois Curfman McInnes    who wish to allocate their own matrix memory space.  Most users should
24106cfe35ddSJose E. Roman    set data=NULL (PETSC_NULL_SCALAR for Fortran users).
241118f449edSLois Curfman McInnes 
24128965ea79SLois Curfman McInnes    The user MUST specify either the local or global matrix dimensions
24138965ea79SLois Curfman McInnes    (possibly both).
24148965ea79SLois Curfman McInnes 
2415027ccd11SLois Curfman McInnes    Level: intermediate
2416027ccd11SLois Curfman McInnes 
241739ddd567SLois Curfman McInnes .seealso: MatCreate(), MatCreateSeqDense(), MatSetValues()
24188965ea79SLois Curfman McInnes @*/
241969b1f4b7SBarry Smith PetscErrorCode  MatCreateDense(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
24208965ea79SLois Curfman McInnes {
24216849ba73SBarry Smith   PetscErrorCode ierr;
242213f74950SBarry Smith   PetscMPIInt    size;
24238965ea79SLois Curfman McInnes 
24243a40ed3dSBarry Smith   PetscFunctionBegin;
2425f69a0ea3SMatthew Knepley   ierr = MatCreate(comm,A);CHKERRQ(ierr);
2426f69a0ea3SMatthew Knepley   ierr = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr);
2427ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2428273d9f13SBarry Smith   if (size > 1) {
24298f490ea3SStefano Zampini     PetscBool havedata = (PetscBool)!!data;
24308f490ea3SStefano Zampini 
2431273d9f13SBarry Smith     ierr = MatSetType(*A,MATMPIDENSE);CHKERRQ(ierr);
2432273d9f13SBarry Smith     ierr = MatMPIDenseSetPreallocation(*A,data);CHKERRQ(ierr);
24338f490ea3SStefano Zampini     ierr = MPIU_Allreduce(MPI_IN_PLACE,&havedata,1,MPIU_BOOL,MPI_LOR,comm);CHKERRQ(ierr);
24348f490ea3SStefano Zampini     if (havedata) {  /* user provided data array, so no need to assemble */
24356cfe35ddSJose E. Roman       ierr = MatSetUpMultiply_MPIDense(*A);CHKERRQ(ierr);
24366cfe35ddSJose E. Roman       (*A)->assembled = PETSC_TRUE;
24376cfe35ddSJose E. Roman     }
2438273d9f13SBarry Smith   } else {
2439273d9f13SBarry Smith     ierr = MatSetType(*A,MATSEQDENSE);CHKERRQ(ierr);
2440273d9f13SBarry Smith     ierr = MatSeqDenseSetPreallocation(*A,data);CHKERRQ(ierr);
24418c469469SLois Curfman McInnes   }
24423a40ed3dSBarry Smith   PetscFunctionReturn(0);
24438965ea79SLois Curfman McInnes }
24448965ea79SLois Curfman McInnes 
2445637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2446637a0070SStefano Zampini /*@C
2447637a0070SStefano Zampini    MatCreateDenseCUDA - Creates a matrix in dense format using CUDA.
2448637a0070SStefano Zampini 
2449637a0070SStefano Zampini    Collective
2450637a0070SStefano Zampini 
2451637a0070SStefano Zampini    Input Parameters:
2452637a0070SStefano Zampini +  comm - MPI communicator
2453637a0070SStefano Zampini .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2454637a0070SStefano Zampini .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
2455637a0070SStefano Zampini .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2456637a0070SStefano Zampini .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
2457637a0070SStefano Zampini -  data - optional location of GPU matrix data.  Set data=NULL for PETSc
2458637a0070SStefano Zampini    to control matrix memory allocation.
2459637a0070SStefano Zampini 
2460637a0070SStefano Zampini    Output Parameter:
2461637a0070SStefano Zampini .  A - the matrix
2462637a0070SStefano Zampini 
2463637a0070SStefano Zampini    Notes:
2464637a0070SStefano Zampini 
2465637a0070SStefano Zampini    Level: intermediate
2466637a0070SStefano Zampini 
2467637a0070SStefano Zampini .seealso: MatCreate(), MatCreateDense()
2468637a0070SStefano Zampini @*/
2469637a0070SStefano Zampini PetscErrorCode  MatCreateDenseCUDA(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
2470637a0070SStefano Zampini {
2471637a0070SStefano Zampini   PetscErrorCode ierr;
2472637a0070SStefano Zampini   PetscMPIInt    size;
2473637a0070SStefano Zampini 
2474637a0070SStefano Zampini   PetscFunctionBegin;
2475637a0070SStefano Zampini   ierr = MatCreate(comm,A);CHKERRQ(ierr);
2476637a0070SStefano Zampini   PetscValidLogicalCollectiveBool(*A,!!data,6);
2477637a0070SStefano Zampini   ierr = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr);
2478ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2479637a0070SStefano Zampini   if (size > 1) {
2480637a0070SStefano Zampini     ierr = MatSetType(*A,MATMPIDENSECUDA);CHKERRQ(ierr);
2481637a0070SStefano Zampini     ierr = MatMPIDenseCUDASetPreallocation(*A,data);CHKERRQ(ierr);
2482637a0070SStefano Zampini     if (data) {  /* user provided data array, so no need to assemble */
2483637a0070SStefano Zampini       ierr = MatSetUpMultiply_MPIDense(*A);CHKERRQ(ierr);
2484637a0070SStefano Zampini       (*A)->assembled = PETSC_TRUE;
2485637a0070SStefano Zampini     }
2486637a0070SStefano Zampini   } else {
2487637a0070SStefano Zampini     ierr = MatSetType(*A,MATSEQDENSECUDA);CHKERRQ(ierr);
2488637a0070SStefano Zampini     ierr = MatSeqDenseCUDASetPreallocation(*A,data);CHKERRQ(ierr);
2489637a0070SStefano Zampini   }
2490637a0070SStefano Zampini   PetscFunctionReturn(0);
2491637a0070SStefano Zampini }
2492637a0070SStefano Zampini #endif
2493637a0070SStefano Zampini 
24946849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat A,MatDuplicateOption cpvalues,Mat *newmat)
24958965ea79SLois Curfman McInnes {
24968965ea79SLois Curfman McInnes   Mat            mat;
24973501a2bdSLois Curfman McInnes   Mat_MPIDense   *a,*oldmat = (Mat_MPIDense*)A->data;
2498dfbe8321SBarry Smith   PetscErrorCode ierr;
24998965ea79SLois Curfman McInnes 
25003a40ed3dSBarry Smith   PetscFunctionBegin;
2501f4259b30SLisandro Dalcin   *newmat = NULL;
2502ce94432eSBarry Smith   ierr    = MatCreate(PetscObjectComm((PetscObject)A),&mat);CHKERRQ(ierr);
2503d0f46423SBarry Smith   ierr    = MatSetSizes(mat,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
25047adad957SLisandro Dalcin   ierr    = MatSetType(mat,((PetscObject)A)->type_name);CHKERRQ(ierr);
2505834f8fabSBarry Smith   a       = (Mat_MPIDense*)mat->data;
25065aa7edbeSHong Zhang 
2507d5f3da31SBarry Smith   mat->factortype   = A->factortype;
2508c456f294SBarry Smith   mat->assembled    = PETSC_TRUE;
2509273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
25108965ea79SLois Curfman McInnes 
2511e0fa3b82SLois Curfman McInnes   mat->insertmode = NOT_SET_VALUES;
25123782ba37SSatish Balay   a->donotstash   = oldmat->donotstash;
2513e04c1aa4SHong Zhang 
25141e1e43feSBarry Smith   ierr = PetscLayoutReference(A->rmap,&mat->rmap);CHKERRQ(ierr);
25151e1e43feSBarry Smith   ierr = PetscLayoutReference(A->cmap,&mat->cmap);CHKERRQ(ierr);
25168965ea79SLois Curfman McInnes 
25175609ef8eSBarry Smith   ierr = MatDuplicate(oldmat->A,cpvalues,&a->A);CHKERRQ(ierr);
25183bb1ff40SBarry Smith   ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A);CHKERRQ(ierr);
2519637a0070SStefano Zampini   ierr = MatSetUpMultiply_MPIDense(mat);CHKERRQ(ierr);
252001b82886SBarry Smith 
25218965ea79SLois Curfman McInnes   *newmat = mat;
25223a40ed3dSBarry Smith   PetscFunctionReturn(0);
25238965ea79SLois Curfman McInnes }
25248965ea79SLois Curfman McInnes 
2525eb91f321SVaclav Hapla PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer)
2526eb91f321SVaclav Hapla {
2527eb91f321SVaclav Hapla   PetscErrorCode ierr;
252887d5ce66SSatish Balay   PetscBool      isbinary;
252987d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
253087d5ce66SSatish Balay   PetscBool      ishdf5;
253187d5ce66SSatish Balay #endif
2532eb91f321SVaclav Hapla 
2533eb91f321SVaclav Hapla   PetscFunctionBegin;
2534eb91f321SVaclav Hapla   PetscValidHeaderSpecific(newMat,MAT_CLASSID,1);
2535eb91f321SVaclav Hapla   PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2);
2536eb91f321SVaclav Hapla   /* force binary viewer to load .info file if it has not yet done so */
2537eb91f321SVaclav Hapla   ierr = PetscViewerSetUp(viewer);CHKERRQ(ierr);
2538eb91f321SVaclav Hapla   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr);
253987d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
2540eb91f321SVaclav Hapla   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERHDF5,  &ishdf5);CHKERRQ(ierr);
254187d5ce66SSatish Balay #endif
2542eb91f321SVaclav Hapla   if (isbinary) {
25438491ab44SLisandro Dalcin     ierr = MatLoad_Dense_Binary(newMat,viewer);CHKERRQ(ierr);
2544eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5)
254587d5ce66SSatish Balay   } else if (ishdf5) {
2546eb91f321SVaclav Hapla     ierr = MatLoad_Dense_HDF5(newMat,viewer);CHKERRQ(ierr);
2547eb91f321SVaclav Hapla #endif
254887d5ce66SSatish Balay   } else SETERRQ2(PetscObjectComm((PetscObject)newMat),PETSC_ERR_SUP,"Viewer type %s not yet supported for reading %s matrices",((PetscObject)viewer)->type_name,((PetscObject)newMat)->type_name);
2549eb91f321SVaclav Hapla   PetscFunctionReturn(0);
2550eb91f321SVaclav Hapla }
2551eb91f321SVaclav Hapla 
25526718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat A,Mat B,PetscBool  *flag)
25536e4ee0c6SHong Zhang {
25546e4ee0c6SHong Zhang   Mat_MPIDense   *matB = (Mat_MPIDense*)B->data,*matA = (Mat_MPIDense*)A->data;
25556e4ee0c6SHong Zhang   Mat            a,b;
2556ace3abfcSBarry Smith   PetscBool      flg;
25576e4ee0c6SHong Zhang   PetscErrorCode ierr;
255890ace30eSBarry Smith 
25596e4ee0c6SHong Zhang   PetscFunctionBegin;
25606e4ee0c6SHong Zhang   a    = matA->A;
25616e4ee0c6SHong Zhang   b    = matB->A;
25626e4ee0c6SHong Zhang   ierr = MatEqual(a,b,&flg);CHKERRQ(ierr);
2563b2566f29SBarry Smith   ierr = MPIU_Allreduce(&flg,flag,1,MPIU_BOOL,MPI_LAND,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
25646e4ee0c6SHong Zhang   PetscFunctionReturn(0);
25656e4ee0c6SHong Zhang }
256690ace30eSBarry Smith 
25676718818eSStefano Zampini PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data)
2568baa3c1c6SHong Zhang {
2569baa3c1c6SHong Zhang   PetscErrorCode        ierr;
25706718818eSStefano Zampini   Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data;
2571baa3c1c6SHong Zhang 
2572baa3c1c6SHong Zhang   PetscFunctionBegin;
2573637a0070SStefano Zampini   ierr = PetscFree2(atb->sendbuf,atb->recvcounts);CHKERRQ(ierr);
2574637a0070SStefano Zampini   ierr = MatDestroy(&atb->atb);CHKERRQ(ierr);
2575baa3c1c6SHong Zhang   ierr = PetscFree(atb);CHKERRQ(ierr);
2576baa3c1c6SHong Zhang   PetscFunctionReturn(0);
2577baa3c1c6SHong Zhang }
2578baa3c1c6SHong Zhang 
25796718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data)
2580cc48ffa7SToby Isaac {
2581cc48ffa7SToby Isaac   PetscErrorCode        ierr;
25826718818eSStefano Zampini   Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data;
2583cc48ffa7SToby Isaac 
2584cc48ffa7SToby Isaac   PetscFunctionBegin;
2585cc48ffa7SToby Isaac   ierr = PetscFree2(abt->buf[0],abt->buf[1]);CHKERRQ(ierr);
2586faa55883SToby Isaac   ierr = PetscFree2(abt->recvcounts,abt->recvdispls);CHKERRQ(ierr);
2587cc48ffa7SToby Isaac   ierr = PetscFree(abt);CHKERRQ(ierr);
2588cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2589cc48ffa7SToby Isaac }
2590cc48ffa7SToby Isaac 
25916718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2592cb20be35SHong Zhang {
2593baa3c1c6SHong Zhang   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
25946718818eSStefano Zampini   Mat_TransMatMultDense *atb;
2595cb20be35SHong Zhang   PetscErrorCode        ierr;
2596cb20be35SHong Zhang   MPI_Comm              comm;
25976718818eSStefano Zampini   PetscMPIInt           size,*recvcounts;
25986718818eSStefano Zampini   PetscScalar           *carray,*sendbuf;
2599637a0070SStefano Zampini   const PetscScalar     *atbarray;
2600d5017740SHong Zhang   PetscInt              i,cN=C->cmap->N,cM=C->rmap->N,proc,k,j;
2601e68c0b26SHong Zhang   const PetscInt        *ranges;
2602cb20be35SHong Zhang 
2603cb20be35SHong Zhang   PetscFunctionBegin;
26046718818eSStefano Zampini   MatCheckProduct(C,3);
26056718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
26066718818eSStefano Zampini   atb = (Mat_TransMatMultDense *)C->product->data;
26076718818eSStefano Zampini   recvcounts = atb->recvcounts;
26086718818eSStefano Zampini   sendbuf = atb->sendbuf;
26096718818eSStefano Zampini 
2610cb20be35SHong Zhang   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
2611ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2612e68c0b26SHong Zhang 
2613c5ef1628SHong Zhang   /* compute atbarray = aseq^T * bseq */
2614637a0070SStefano Zampini   ierr = MatTransposeMatMult(a->A,b->A,atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX,PETSC_DEFAULT,&atb->atb);CHKERRQ(ierr);
2615cb20be35SHong Zhang 
2616cb20be35SHong Zhang   ierr = MatGetOwnershipRanges(C,&ranges);CHKERRQ(ierr);
2617cb20be35SHong Zhang 
2618660d5466SHong Zhang   /* arrange atbarray into sendbuf */
2619637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(atb->atb,&atbarray);CHKERRQ(ierr);
2620637a0070SStefano Zampini   for (proc=0, k=0; proc<size; proc++) {
2621baa3c1c6SHong Zhang     for (j=0; j<cN; j++) {
2622c5ef1628SHong Zhang       for (i=ranges[proc]; i<ranges[proc+1]; i++) sendbuf[k++] = atbarray[i+j*cM];
2623cb20be35SHong Zhang     }
2624cb20be35SHong Zhang   }
2625637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(atb->atb,&atbarray);CHKERRQ(ierr);
2626637a0070SStefano Zampini 
2627c5ef1628SHong Zhang   /* sum all atbarray to local values of C */
26280acaeb71SStefano Zampini   ierr = MatDenseGetArrayWrite(c->A,&carray);CHKERRQ(ierr);
2629ffc4695bSBarry Smith   ierr = MPI_Reduce_scatter(sendbuf,carray,recvcounts,MPIU_SCALAR,MPIU_SUM,comm);CHKERRMPI(ierr);
26300acaeb71SStefano Zampini   ierr = MatDenseRestoreArrayWrite(c->A,&carray);CHKERRQ(ierr);
26310acaeb71SStefano Zampini   ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
26320acaeb71SStefano Zampini   ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2633cb20be35SHong Zhang   PetscFunctionReturn(0);
2634cb20be35SHong Zhang }
2635cb20be35SHong Zhang 
26366718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2637cb20be35SHong Zhang {
2638cb20be35SHong Zhang   PetscErrorCode        ierr;
2639cb20be35SHong Zhang   MPI_Comm              comm;
2640baa3c1c6SHong Zhang   PetscMPIInt           size;
2641660d5466SHong Zhang   PetscInt              cm=A->cmap->n,cM,cN=B->cmap->N;
2642baa3c1c6SHong Zhang   Mat_TransMatMultDense *atb;
26436718818eSStefano Zampini   PetscBool             cisdense;
26440acaeb71SStefano Zampini   PetscInt              i;
26450acaeb71SStefano Zampini   const PetscInt        *ranges;
2646cb20be35SHong Zhang 
2647cb20be35SHong Zhang   PetscFunctionBegin;
26486718818eSStefano Zampini   MatCheckProduct(C,3);
26496718818eSStefano Zampini   if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
2650baa3c1c6SHong Zhang   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
2651cb20be35SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) {
2652cb20be35SHong Zhang     SETERRQ4(comm,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%D, %D) != B (%D,%D)",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2653cb20be35SHong Zhang   }
2654cb20be35SHong Zhang 
26554222ddf1SHong Zhang   /* create matrix product C */
26566718818eSStefano Zampini   ierr = MatSetSizes(C,cm,B->cmap->n,A->cmap->N,B->cmap->N);CHKERRQ(ierr);
26576718818eSStefano Zampini   ierr = PetscObjectTypeCompareAny((PetscObject)C,&cisdense,MATMPIDENSE,MATMPIDENSECUDA,"");CHKERRQ(ierr);
26586718818eSStefano Zampini   if (!cisdense) {
26596718818eSStefano Zampini     ierr = MatSetType(C,((PetscObject)A)->type_name);CHKERRQ(ierr);
26606718818eSStefano Zampini   }
266118992e5dSStefano Zampini   ierr = MatSetUp(C);CHKERRQ(ierr);
2662baa3c1c6SHong Zhang 
26634222ddf1SHong Zhang   /* create data structure for reuse C */
2664ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2665baa3c1c6SHong Zhang   ierr = PetscNew(&atb);CHKERRQ(ierr);
26664222ddf1SHong Zhang   cM   = C->rmap->N;
26676718818eSStefano Zampini   ierr = PetscMalloc2((size_t)cM*(size_t)cN,&atb->sendbuf,size,&atb->recvcounts);CHKERRQ(ierr);
26680acaeb71SStefano Zampini   ierr = MatGetOwnershipRanges(C,&ranges);CHKERRQ(ierr);
26690acaeb71SStefano Zampini   for (i=0; i<size; i++) atb->recvcounts[i] = (ranges[i+1] - ranges[i])*cN;
2670baa3c1c6SHong Zhang 
26716718818eSStefano Zampini   C->product->data    = atb;
26726718818eSStefano Zampini   C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense;
2673cb20be35SHong Zhang   PetscFunctionReturn(0);
2674cb20be35SHong Zhang }
2675cb20be35SHong Zhang 
26764222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C)
2677cb20be35SHong Zhang {
2678cb20be35SHong Zhang   PetscErrorCode        ierr;
2679cc48ffa7SToby Isaac   MPI_Comm              comm;
2680cc48ffa7SToby Isaac   PetscMPIInt           i, size;
2681cc48ffa7SToby Isaac   PetscInt              maxRows, bufsiz;
2682cc48ffa7SToby Isaac   PetscMPIInt           tag;
26834222ddf1SHong Zhang   PetscInt              alg;
2684cc48ffa7SToby Isaac   Mat_MatTransMultDense *abt;
26854222ddf1SHong Zhang   Mat_Product           *product = C->product;
26864222ddf1SHong Zhang   PetscBool             flg;
2687cc48ffa7SToby Isaac 
2688cc48ffa7SToby Isaac   PetscFunctionBegin;
26896718818eSStefano Zampini   MatCheckProduct(C,4);
26906718818eSStefano Zampini   if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
26914222ddf1SHong Zhang   /* check local size of A and B */
2692637a0070SStefano Zampini   if (A->cmap->n != B->cmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local column dimensions are incompatible, A (%D) != B (%D)",A->cmap->n,B->cmap->n);
2693cc48ffa7SToby Isaac 
26944222ddf1SHong Zhang   ierr = PetscStrcmp(product->alg,"allgatherv",&flg);CHKERRQ(ierr);
2695637a0070SStefano Zampini   alg  = flg ? 0 : 1;
2696cc48ffa7SToby Isaac 
26974222ddf1SHong Zhang   /* setup matrix product C */
26984222ddf1SHong Zhang   ierr = MatSetSizes(C,A->rmap->n,B->rmap->n,A->rmap->N,B->rmap->N);CHKERRQ(ierr);
26994222ddf1SHong Zhang   ierr = MatSetType(C,MATMPIDENSE);CHKERRQ(ierr);
270018992e5dSStefano Zampini   ierr = MatSetUp(C);CHKERRQ(ierr);
27014222ddf1SHong Zhang   ierr = PetscObjectGetNewTag((PetscObject)C,&tag);CHKERRQ(ierr);
27024222ddf1SHong Zhang 
27034222ddf1SHong Zhang   /* create data structure for reuse C */
27044222ddf1SHong Zhang   ierr = PetscObjectGetComm((PetscObject)C,&comm);CHKERRQ(ierr);
2705ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2706cc48ffa7SToby Isaac   ierr = PetscNew(&abt);CHKERRQ(ierr);
2707cc48ffa7SToby Isaac   abt->tag = tag;
2708faa55883SToby Isaac   abt->alg = alg;
2709faa55883SToby Isaac   switch (alg) {
27104222ddf1SHong Zhang   case 1: /* alg: "cyclic" */
2711cc48ffa7SToby Isaac     for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i]));
2712cc48ffa7SToby Isaac     bufsiz = A->cmap->N * maxRows;
2713cc48ffa7SToby Isaac     ierr = PetscMalloc2(bufsiz,&(abt->buf[0]),bufsiz,&(abt->buf[1]));CHKERRQ(ierr);
2714faa55883SToby Isaac     break;
27154222ddf1SHong Zhang   default: /* alg: "allgatherv" */
2716faa55883SToby Isaac     ierr = PetscMalloc2(B->rmap->n * B->cmap->N, &(abt->buf[0]), B->rmap->N * B->cmap->N, &(abt->buf[1]));CHKERRQ(ierr);
2717faa55883SToby Isaac     ierr = PetscMalloc2(size,&(abt->recvcounts),size+1,&(abt->recvdispls));CHKERRQ(ierr);
2718faa55883SToby Isaac     for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N;
2719faa55883SToby Isaac     for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i];
2720faa55883SToby Isaac     break;
2721faa55883SToby Isaac   }
2722cc48ffa7SToby Isaac 
27236718818eSStefano Zampini   C->product->data    = abt;
27246718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense;
27254222ddf1SHong Zhang   C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense;
2726cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2727cc48ffa7SToby Isaac }
2728cc48ffa7SToby Isaac 
2729faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C)
2730cc48ffa7SToby Isaac {
2731cc48ffa7SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
27326718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2733cc48ffa7SToby Isaac   PetscErrorCode        ierr;
2734cc48ffa7SToby Isaac   MPI_Comm              comm;
2735cc48ffa7SToby Isaac   PetscMPIInt           rank,size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom;
2736f4259b30SLisandro Dalcin   PetscScalar           *sendbuf, *recvbuf=NULL, *cv;
2737cc48ffa7SToby Isaac   PetscInt              i,cK=A->cmap->N,k,j,bn;
2738cc48ffa7SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2739637a0070SStefano Zampini   const PetscScalar     *av,*bv;
274023fff9afSBarry Smith   PetscBLASInt          cm, cn, ck, alda, blda = 0, clda;
2741cc48ffa7SToby Isaac   MPI_Request           reqs[2];
2742cc48ffa7SToby Isaac   const PetscInt        *ranges;
2743cc48ffa7SToby Isaac 
2744cc48ffa7SToby Isaac   PetscFunctionBegin;
27456718818eSStefano Zampini   MatCheckProduct(C,3);
27466718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
27476718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
27486718818eSStefano Zampini   ierr = PetscObjectGetComm((PetscObject)C,&comm);CHKERRQ(ierr);
2749ffc4695bSBarry Smith   ierr = MPI_Comm_rank(comm,&rank);CHKERRMPI(ierr);
2750ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2751637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(a->A,&av);CHKERRQ(ierr);
2752637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(b->A,&bv);CHKERRQ(ierr);
27530acaeb71SStefano Zampini   ierr = MatDenseGetArrayWrite(c->A,&cv);CHKERRQ(ierr);
2754637a0070SStefano Zampini   ierr = MatDenseGetLDA(a->A,&i);CHKERRQ(ierr);
2755637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&alda);CHKERRQ(ierr);
2756637a0070SStefano Zampini   ierr = MatDenseGetLDA(b->A,&i);CHKERRQ(ierr);
2757637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&blda);CHKERRQ(ierr);
2758637a0070SStefano Zampini   ierr = MatDenseGetLDA(c->A,&i);CHKERRQ(ierr);
2759637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&clda);CHKERRQ(ierr);
2760cc48ffa7SToby Isaac   ierr = MatGetOwnershipRanges(B,&ranges);CHKERRQ(ierr);
2761cc48ffa7SToby Isaac   bn   = B->rmap->n;
2762637a0070SStefano Zampini   if (blda == bn) {
2763637a0070SStefano Zampini     sendbuf = (PetscScalar*)bv;
2764cc48ffa7SToby Isaac   } else {
2765cc48ffa7SToby Isaac     sendbuf = abt->buf[0];
2766cc48ffa7SToby Isaac     for (k = 0, i = 0; i < cK; i++) {
2767cc48ffa7SToby Isaac       for (j = 0; j < bn; j++, k++) {
2768637a0070SStefano Zampini         sendbuf[k] = bv[i * blda + j];
2769cc48ffa7SToby Isaac       }
2770cc48ffa7SToby Isaac     }
2771cc48ffa7SToby Isaac   }
2772cc48ffa7SToby Isaac   if (size > 1) {
2773cc48ffa7SToby Isaac     sendto = (rank + size - 1) % size;
2774cc48ffa7SToby Isaac     recvfrom = (rank + size + 1) % size;
2775cc48ffa7SToby Isaac   } else {
2776cc48ffa7SToby Isaac     sendto = recvfrom = 0;
2777cc48ffa7SToby Isaac   }
2778cc48ffa7SToby Isaac   ierr = PetscBLASIntCast(cK,&ck);CHKERRQ(ierr);
2779cc48ffa7SToby Isaac   ierr = PetscBLASIntCast(c->A->rmap->n,&cm);CHKERRQ(ierr);
2780cc48ffa7SToby Isaac   recvisfrom = rank;
2781cc48ffa7SToby Isaac   for (i = 0; i < size; i++) {
2782cc48ffa7SToby Isaac     /* we have finished receiving in sending, bufs can be read/modified */
2783cc48ffa7SToby Isaac     PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */
2784cc48ffa7SToby Isaac     PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom];
2785cc48ffa7SToby Isaac 
2786cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2787cc48ffa7SToby Isaac       /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */
2788cc48ffa7SToby Isaac       sendsiz = cK * bn;
2789cc48ffa7SToby Isaac       recvsiz = cK * nextbn;
2790cc48ffa7SToby Isaac       recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1];
2791ffc4695bSBarry Smith       ierr = MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0]);CHKERRMPI(ierr);
2792ffc4695bSBarry Smith       ierr = MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1]);CHKERRMPI(ierr);
2793cc48ffa7SToby Isaac     }
2794cc48ffa7SToby Isaac 
2795cc48ffa7SToby Isaac     /* local aseq * sendbuf^T */
2796cc48ffa7SToby Isaac     ierr = PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn);CHKERRQ(ierr);
279750ce3c9cSStefano Zampini     if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","T",&cm,&cn,&ck,&_DOne,av,&alda,sendbuf,&cn,&_DZero,cv + clda * ranges[recvisfrom],&clda));
2798cc48ffa7SToby Isaac 
2799cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2800cc48ffa7SToby Isaac       /* wait for the sends and receives to complete, swap sendbuf and recvbuf */
2801ffc4695bSBarry Smith       ierr = MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE);CHKERRMPI(ierr);
2802cc48ffa7SToby Isaac     }
2803cc48ffa7SToby Isaac     bn = nextbn;
2804cc48ffa7SToby Isaac     recvisfrom = nextrecvisfrom;
2805cc48ffa7SToby Isaac     sendbuf = recvbuf;
2806cc48ffa7SToby Isaac   }
2807637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,&av);CHKERRQ(ierr);
2808637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(b->A,&bv);CHKERRQ(ierr);
28090acaeb71SStefano Zampini   ierr = MatDenseRestoreArrayWrite(c->A,&cv);CHKERRQ(ierr);
28100acaeb71SStefano Zampini   ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
28110acaeb71SStefano Zampini   ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2812cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2813cc48ffa7SToby Isaac }
2814cc48ffa7SToby Isaac 
2815faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C)
2816faa55883SToby Isaac {
2817faa55883SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
28186718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2819faa55883SToby Isaac   PetscErrorCode        ierr;
2820faa55883SToby Isaac   MPI_Comm              comm;
2821637a0070SStefano Zampini   PetscMPIInt           size;
2822637a0070SStefano Zampini   PetscScalar           *cv, *sendbuf, *recvbuf;
2823637a0070SStefano Zampini   const PetscScalar     *av,*bv;
2824637a0070SStefano Zampini   PetscInt              blda,i,cK=A->cmap->N,k,j,bn;
2825faa55883SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2826637a0070SStefano Zampini   PetscBLASInt          cm, cn, ck, alda, clda;
2827faa55883SToby Isaac 
2828faa55883SToby Isaac   PetscFunctionBegin;
28296718818eSStefano Zampini   MatCheckProduct(C,3);
28306718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
28316718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
2832faa55883SToby Isaac   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
2833ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2834637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(a->A,&av);CHKERRQ(ierr);
2835637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(b->A,&bv);CHKERRQ(ierr);
28360acaeb71SStefano Zampini   ierr = MatDenseGetArrayWrite(c->A,&cv);CHKERRQ(ierr);
2837637a0070SStefano Zampini   ierr = MatDenseGetLDA(a->A,&i);CHKERRQ(ierr);
2838637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&alda);CHKERRQ(ierr);
2839637a0070SStefano Zampini   ierr = MatDenseGetLDA(b->A,&blda);CHKERRQ(ierr);
2840637a0070SStefano Zampini   ierr = MatDenseGetLDA(c->A,&i);CHKERRQ(ierr);
2841637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&clda);CHKERRQ(ierr);
2842faa55883SToby Isaac   /* copy transpose of B into buf[0] */
2843faa55883SToby Isaac   bn      = B->rmap->n;
2844faa55883SToby Isaac   sendbuf = abt->buf[0];
2845faa55883SToby Isaac   recvbuf = abt->buf[1];
2846faa55883SToby Isaac   for (k = 0, j = 0; j < bn; j++) {
2847faa55883SToby Isaac     for (i = 0; i < cK; i++, k++) {
2848637a0070SStefano Zampini       sendbuf[k] = bv[i * blda + j];
2849faa55883SToby Isaac     }
2850faa55883SToby Isaac   }
2851637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(b->A,&bv);CHKERRQ(ierr);
2852ffc4695bSBarry Smith   ierr = MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm);CHKERRMPI(ierr);
2853faa55883SToby Isaac   ierr = PetscBLASIntCast(cK,&ck);CHKERRQ(ierr);
2854faa55883SToby Isaac   ierr = PetscBLASIntCast(c->A->rmap->n,&cm);CHKERRQ(ierr);
2855faa55883SToby Isaac   ierr = PetscBLASIntCast(c->A->cmap->n,&cn);CHKERRQ(ierr);
285650ce3c9cSStefano Zampini   if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","N",&cm,&cn,&ck,&_DOne,av,&alda,recvbuf,&ck,&_DZero,cv,&clda));
2857637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,&av);CHKERRQ(ierr);
2858637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(b->A,&bv);CHKERRQ(ierr);
28590acaeb71SStefano Zampini   ierr = MatDenseRestoreArrayWrite(c->A,&cv);CHKERRQ(ierr);
28600acaeb71SStefano Zampini   ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
28610acaeb71SStefano Zampini   ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2862faa55883SToby Isaac   PetscFunctionReturn(0);
2863faa55883SToby Isaac }
2864faa55883SToby Isaac 
2865faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C)
2866faa55883SToby Isaac {
28676718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2868faa55883SToby Isaac   PetscErrorCode        ierr;
2869faa55883SToby Isaac 
2870faa55883SToby Isaac   PetscFunctionBegin;
28716718818eSStefano Zampini   MatCheckProduct(C,3);
28726718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
28736718818eSStefano Zampini   abt = (Mat_MatTransMultDense*)C->product->data;
2874faa55883SToby Isaac   switch (abt->alg) {
2875faa55883SToby Isaac   case 1:
2876faa55883SToby Isaac     ierr = MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C);CHKERRQ(ierr);
2877faa55883SToby Isaac     break;
2878faa55883SToby Isaac   default:
2879faa55883SToby Isaac     ierr = MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C);CHKERRQ(ierr);
2880faa55883SToby Isaac     break;
2881faa55883SToby Isaac   }
2882faa55883SToby Isaac   PetscFunctionReturn(0);
2883faa55883SToby Isaac }
2884faa55883SToby Isaac 
28856718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data)
2886320f2790SHong Zhang {
2887320f2790SHong Zhang   PetscErrorCode   ierr;
28886718818eSStefano Zampini   Mat_MatMultDense *ab = (Mat_MatMultDense*)data;
2889320f2790SHong Zhang 
2890320f2790SHong Zhang   PetscFunctionBegin;
2891320f2790SHong Zhang   ierr = MatDestroy(&ab->Ce);CHKERRQ(ierr);
2892320f2790SHong Zhang   ierr = MatDestroy(&ab->Ae);CHKERRQ(ierr);
2893320f2790SHong Zhang   ierr = MatDestroy(&ab->Be);CHKERRQ(ierr);
2894320f2790SHong Zhang   ierr = PetscFree(ab);CHKERRQ(ierr);
2895320f2790SHong Zhang   PetscFunctionReturn(0);
2896320f2790SHong Zhang }
2897320f2790SHong Zhang 
28985242a7b1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
2899320f2790SHong Zhang PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2900320f2790SHong Zhang {
2901320f2790SHong Zhang   PetscErrorCode   ierr;
29026718818eSStefano Zampini   Mat_MatMultDense *ab;
2903320f2790SHong Zhang 
2904320f2790SHong Zhang   PetscFunctionBegin;
29056718818eSStefano Zampini   MatCheckProduct(C,3);
29066718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing product data");
29076718818eSStefano Zampini   ab   = (Mat_MatMultDense*)C->product->data;
2908de0a22f0SHong Zhang   ierr = MatConvert_MPIDense_Elemental(A,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Ae);CHKERRQ(ierr);
2909de0a22f0SHong Zhang   ierr = MatConvert_MPIDense_Elemental(B,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Be);CHKERRQ(ierr);
29104222ddf1SHong Zhang   ierr = MatMatMultNumeric_Elemental(ab->Ae,ab->Be,ab->Ce);CHKERRQ(ierr);
2911de0a22f0SHong Zhang   ierr = MatConvert(ab->Ce,MATMPIDENSE,MAT_REUSE_MATRIX,&C);CHKERRQ(ierr);
2912320f2790SHong Zhang   PetscFunctionReturn(0);
2913320f2790SHong Zhang }
2914320f2790SHong Zhang 
29156718818eSStefano Zampini static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2916320f2790SHong Zhang {
2917320f2790SHong Zhang   PetscErrorCode   ierr;
2918320f2790SHong Zhang   Mat              Ae,Be,Ce;
2919320f2790SHong Zhang   Mat_MatMultDense *ab;
2920320f2790SHong Zhang 
2921320f2790SHong Zhang   PetscFunctionBegin;
29226718818eSStefano Zampini   MatCheckProduct(C,4);
29236718818eSStefano Zampini   if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
29244222ddf1SHong Zhang   /* check local size of A and B */
2925320f2790SHong Zhang   if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend) {
2926378336b6SHong Zhang     SETERRQ4(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%D, %D) != B (%D,%D)",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2927320f2790SHong Zhang   }
2928320f2790SHong Zhang 
29294222ddf1SHong Zhang   /* create elemental matrices Ae and Be */
29304222ddf1SHong Zhang   ierr = MatCreate(PetscObjectComm((PetscObject)A), &Ae);CHKERRQ(ierr);
29314222ddf1SHong Zhang   ierr = MatSetSizes(Ae,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
29324222ddf1SHong Zhang   ierr = MatSetType(Ae,MATELEMENTAL);CHKERRQ(ierr);
29334222ddf1SHong Zhang   ierr = MatSetUp(Ae);CHKERRQ(ierr);
29344222ddf1SHong Zhang   ierr = MatSetOption(Ae,MAT_ROW_ORIENTED,PETSC_FALSE);CHKERRQ(ierr);
2935320f2790SHong Zhang 
29364222ddf1SHong Zhang   ierr = MatCreate(PetscObjectComm((PetscObject)B), &Be);CHKERRQ(ierr);
29374222ddf1SHong Zhang   ierr = MatSetSizes(Be,PETSC_DECIDE,PETSC_DECIDE,B->rmap->N,B->cmap->N);CHKERRQ(ierr);
29384222ddf1SHong Zhang   ierr = MatSetType(Be,MATELEMENTAL);CHKERRQ(ierr);
29394222ddf1SHong Zhang   ierr = MatSetUp(Be);CHKERRQ(ierr);
29404222ddf1SHong Zhang   ierr = MatSetOption(Be,MAT_ROW_ORIENTED,PETSC_FALSE);CHKERRQ(ierr);
2941320f2790SHong Zhang 
29424222ddf1SHong Zhang   /* compute symbolic Ce = Ae*Be */
29434222ddf1SHong Zhang   ierr = MatCreate(PetscObjectComm((PetscObject)C),&Ce);CHKERRQ(ierr);
29444222ddf1SHong Zhang   ierr = MatMatMultSymbolic_Elemental(Ae,Be,fill,Ce);CHKERRQ(ierr);
29454222ddf1SHong Zhang 
29464222ddf1SHong Zhang   /* setup C */
29474222ddf1SHong Zhang   ierr = MatSetSizes(C,A->rmap->n,B->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
29484222ddf1SHong Zhang   ierr = MatSetType(C,MATDENSE);CHKERRQ(ierr);
29494222ddf1SHong Zhang   ierr = MatSetUp(C);CHKERRQ(ierr);
2950320f2790SHong Zhang 
2951320f2790SHong Zhang   /* create data structure for reuse Cdense */
2952320f2790SHong Zhang   ierr = PetscNew(&ab);CHKERRQ(ierr);
2953320f2790SHong Zhang   ab->Ae = Ae;
2954320f2790SHong Zhang   ab->Be = Be;
2955320f2790SHong Zhang   ab->Ce = Ce;
29566718818eSStefano Zampini 
29576718818eSStefano Zampini   C->product->data    = ab;
29586718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense;
29594222ddf1SHong Zhang   C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense;
2960320f2790SHong Zhang   PetscFunctionReturn(0);
2961320f2790SHong Zhang }
29624222ddf1SHong Zhang #endif
29634222ddf1SHong Zhang /* ----------------------------------------------- */
29644222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
29654222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C)
2966320f2790SHong Zhang {
2967320f2790SHong Zhang   PetscFunctionBegin;
29684222ddf1SHong Zhang   C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense;
29694222ddf1SHong Zhang   C->ops->productsymbolic = MatProductSymbolic_AB;
2970320f2790SHong Zhang   PetscFunctionReturn(0);
2971320f2790SHong Zhang }
29725242a7b1SHong Zhang #endif
297386aefd0dSHong Zhang 
29744222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C)
29754222ddf1SHong Zhang {
29764222ddf1SHong Zhang   Mat_Product *product = C->product;
29774222ddf1SHong Zhang   Mat         A = product->A,B=product->B;
29784222ddf1SHong Zhang 
29794222ddf1SHong Zhang   PetscFunctionBegin;
29804222ddf1SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend)
29814222ddf1SHong Zhang     SETERRQ4(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%D, %D) != (%D,%D)",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
29826718818eSStefano Zampini   C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense;
29836718818eSStefano Zampini   C->ops->productsymbolic = MatProductSymbolic_AtB;
29844222ddf1SHong Zhang   PetscFunctionReturn(0);
29854222ddf1SHong Zhang }
29864222ddf1SHong Zhang 
29874222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C)
29884222ddf1SHong Zhang {
29894222ddf1SHong Zhang   PetscErrorCode ierr;
29904222ddf1SHong Zhang   Mat_Product    *product = C->product;
29914222ddf1SHong Zhang   const char     *algTypes[2] = {"allgatherv","cyclic"};
29924222ddf1SHong Zhang   PetscInt       alg,nalg = 2;
29934222ddf1SHong Zhang   PetscBool      flg = PETSC_FALSE;
29944222ddf1SHong Zhang 
29954222ddf1SHong Zhang   PetscFunctionBegin;
29964222ddf1SHong Zhang   /* Set default algorithm */
29974222ddf1SHong Zhang   alg = 0; /* default is allgatherv */
29984222ddf1SHong Zhang   ierr = PetscStrcmp(product->alg,"default",&flg);CHKERRQ(ierr);
29994222ddf1SHong Zhang   if (flg) {
30004222ddf1SHong Zhang     ierr = MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]);CHKERRQ(ierr);
30014222ddf1SHong Zhang   }
30024222ddf1SHong Zhang 
30034222ddf1SHong Zhang   /* Get runtime option */
30044222ddf1SHong Zhang   if (product->api_user) {
30054222ddf1SHong Zhang     ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatMatTransposeMult","Mat");CHKERRQ(ierr);
30064222ddf1SHong Zhang     ierr = PetscOptionsEList("-matmattransmult_mpidense_mpidense_via","Algorithmic approach","MatMatTransposeMult",algTypes,nalg,algTypes[alg],&alg,&flg);CHKERRQ(ierr);
30074222ddf1SHong Zhang     ierr = PetscOptionsEnd();CHKERRQ(ierr);
30084222ddf1SHong Zhang   } else {
30094222ddf1SHong Zhang     ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatProduct_ABt","Mat");CHKERRQ(ierr);
30104222ddf1SHong Zhang     ierr = PetscOptionsEList("-matproduct_abt_mpidense_mpidense_via","Algorithmic approach","MatProduct_ABt",algTypes,nalg,algTypes[alg],&alg,&flg);CHKERRQ(ierr);
30114222ddf1SHong Zhang     ierr = PetscOptionsEnd();CHKERRQ(ierr);
30124222ddf1SHong Zhang   }
30134222ddf1SHong Zhang   if (flg) {
30144222ddf1SHong Zhang     ierr = MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]);CHKERRQ(ierr);
30154222ddf1SHong Zhang   }
30164222ddf1SHong Zhang 
30174222ddf1SHong Zhang   C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense;
30184222ddf1SHong Zhang   C->ops->productsymbolic          = MatProductSymbolic_ABt;
30194222ddf1SHong Zhang   PetscFunctionReturn(0);
30204222ddf1SHong Zhang }
30214222ddf1SHong Zhang 
30224222ddf1SHong Zhang PETSC_INTERN PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C)
30234222ddf1SHong Zhang {
30244222ddf1SHong Zhang   PetscErrorCode ierr;
30254222ddf1SHong Zhang   Mat_Product    *product = C->product;
30264222ddf1SHong Zhang 
30274222ddf1SHong Zhang   PetscFunctionBegin;
30284222ddf1SHong Zhang   switch (product->type) {
30294222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
30304222ddf1SHong Zhang   case MATPRODUCT_AB:
30314222ddf1SHong Zhang     ierr = MatProductSetFromOptions_MPIDense_AB(C);CHKERRQ(ierr);
30324222ddf1SHong Zhang     break;
30334222ddf1SHong Zhang #endif
30344222ddf1SHong Zhang   case MATPRODUCT_AtB:
30354222ddf1SHong Zhang     ierr = MatProductSetFromOptions_MPIDense_AtB(C);CHKERRQ(ierr);
30364222ddf1SHong Zhang     break;
30374222ddf1SHong Zhang   case MATPRODUCT_ABt:
30384222ddf1SHong Zhang     ierr = MatProductSetFromOptions_MPIDense_ABt(C);CHKERRQ(ierr);
30394222ddf1SHong Zhang     break;
30406718818eSStefano Zampini   default:
30416718818eSStefano Zampini     break;
30424222ddf1SHong Zhang   }
30434222ddf1SHong Zhang   PetscFunctionReturn(0);
30444222ddf1SHong Zhang }
3045