1ed3cc1f0SBarry Smith /* 2ed3cc1f0SBarry Smith Basic functions for basic parallel dense matrices. 347d993e7Ssuyashtn Portions of this code are under: 447d993e7Ssuyashtn Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved. 5ed3cc1f0SBarry Smith */ 6ed3cc1f0SBarry Smith 7c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h> /*I "petscmat.h" I*/ 88949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h> 9baa3c1c6SHong Zhang #include <petscblaslapack.h> 104186a4bbSPierre Jolivet #include <petsc/private/vecimpl.h> 11*d016bddeSToby Isaac #include <petscdevice.h> 12*d016bddeSToby Isaac #include <petsc/private/deviceimpl.h> 138965ea79SLois Curfman McInnes 14ab92ecdeSBarry Smith /*@ 1511a5261eSBarry Smith MatDenseGetLocalMatrix - For a `MATMPIDENSE` or `MATSEQDENSE` matrix returns the sequential 16ab92ecdeSBarry Smith matrix that represents the operator. For sequential matrices it returns itself. 17ab92ecdeSBarry Smith 18ab92ecdeSBarry Smith Input Parameter: 192ef1f0ffSBarry Smith . A - the sequential or MPI `MATDENSE` matrix 20ab92ecdeSBarry Smith 21ab92ecdeSBarry Smith Output Parameter: 22ab92ecdeSBarry Smith . B - the inner matrix 23ab92ecdeSBarry Smith 248e6c10adSSatish Balay Level: intermediate 258e6c10adSSatish Balay 261cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MATMPIDENSE`, `MATSEQDENSE` 27ab92ecdeSBarry Smith @*/ 28d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetLocalMatrix(Mat A, Mat *B) 29d71ae5a4SJacob Faibussowitsch { 30ab92ecdeSBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 31ace3abfcSBarry Smith PetscBool flg; 32ab92ecdeSBarry Smith 33ab92ecdeSBarry Smith PetscFunctionBegin; 34d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 354f572ea9SToby Isaac PetscAssertPointer(B, 2); 369566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATMPIDENSE, &flg)); 372205254eSKarl Rupp if (flg) *B = mat->A; 38f140bc17SStefano Zampini else { 399566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATSEQDENSE, &flg)); 4028b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for matrix type %s", ((PetscObject)A)->type_name); 41f140bc17SStefano Zampini *B = A; 42f140bc17SStefano Zampini } 433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 44ab92ecdeSBarry Smith } 45ab92ecdeSBarry Smith 4666976f2fSJacob Faibussowitsch static PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s) 47d71ae5a4SJacob Faibussowitsch { 48a76f77c3SStefano Zampini Mat_MPIDense *Amat = (Mat_MPIDense *)A->data; 49a76f77c3SStefano Zampini Mat_MPIDense *Bmat = (Mat_MPIDense *)B->data; 50a76f77c3SStefano Zampini 51a76f77c3SStefano Zampini PetscFunctionBegin; 529566063dSJacob Faibussowitsch PetscCall(MatCopy(Amat->A, Bmat->A, s)); 533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 54a76f77c3SStefano Zampini } 55a76f77c3SStefano Zampini 56d71ae5a4SJacob Faibussowitsch PetscErrorCode MatShift_MPIDense(Mat A, PetscScalar alpha) 57d71ae5a4SJacob Faibussowitsch { 582f605a99SJose E. Roman Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 592f605a99SJose E. Roman PetscInt j, lda, rstart = A->rmap->rstart, rend = A->rmap->rend, rend2; 602f605a99SJose E. Roman PetscScalar *v; 612f605a99SJose E. Roman 622f605a99SJose E. Roman PetscFunctionBegin; 632f605a99SJose E. Roman PetscCall(MatDenseGetArray(mat->A, &v)); 642f605a99SJose E. Roman PetscCall(MatDenseGetLDA(mat->A, &lda)); 652f605a99SJose E. Roman rend2 = PetscMin(rend, A->cmap->N); 662f605a99SJose E. Roman if (rend2 > rstart) { 672f605a99SJose E. Roman for (j = rstart; j < rend2; j++) v[j - rstart + j * lda] += alpha; 682f605a99SJose E. Roman PetscCall(PetscLogFlops(rend2 - rstart)); 692f605a99SJose E. Roman } 702f605a99SJose E. Roman PetscCall(MatDenseRestoreArray(mat->A, &v)); 713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 722f605a99SJose E. Roman } 732f605a99SJose E. Roman 7466976f2fSJacob Faibussowitsch static PetscErrorCode MatGetRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 75d71ae5a4SJacob Faibussowitsch { 76ba8c8a56SBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 77d0f46423SBarry Smith PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 78ba8c8a56SBarry Smith 79ba8c8a56SBarry Smith PetscFunctionBegin; 80aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 81ba8c8a56SBarry Smith lrow = row - rstart; 829566063dSJacob Faibussowitsch PetscCall(MatGetRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 84ba8c8a56SBarry Smith } 85ba8c8a56SBarry Smith 8666976f2fSJacob Faibussowitsch static PetscErrorCode MatRestoreRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 87d71ae5a4SJacob Faibussowitsch { 88637a0070SStefano Zampini Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 89637a0070SStefano Zampini PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 90ba8c8a56SBarry Smith 91ba8c8a56SBarry Smith PetscFunctionBegin; 92aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 93637a0070SStefano Zampini lrow = row - rstart; 949566063dSJacob Faibussowitsch PetscCall(MatRestoreRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 96ba8c8a56SBarry Smith } 97ba8c8a56SBarry Smith 9866976f2fSJacob Faibussowitsch static PetscErrorCode MatGetDiagonalBlock_MPIDense(Mat A, Mat *a) 99d71ae5a4SJacob Faibussowitsch { 1000de54da6SSatish Balay Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 101d0f46423SBarry Smith PetscInt m = A->rmap->n, rstart = A->rmap->rstart; 10287828ca2SBarry Smith PetscScalar *array; 1030de54da6SSatish Balay MPI_Comm comm; 1044b6ae80fSStefano Zampini PetscBool flg; 10511bd1e4dSLisandro Dalcin Mat B; 1060de54da6SSatish Balay 1070de54da6SSatish Balay PetscFunctionBegin; 1089566063dSJacob Faibussowitsch PetscCall(MatHasCongruentLayouts(A, &flg)); 10928b400f6SJacob Faibussowitsch PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only square matrices supported."); 1109566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery((PetscObject)A, "DiagonalBlock", (PetscObject *)&B)); 111616b8fbbSStefano Zampini if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */ 112a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 1139566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSECUDA, &flg)); 11428b400f6SJacob Faibussowitsch PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSECUDA); 115a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 11647d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSEHIP, &flg)); 11747d993e7Ssuyashtn PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSEHIP); 11847d993e7Ssuyashtn #endif 119f4f49eeaSPierre Jolivet PetscCall(PetscObjectGetComm((PetscObject)mdn->A, &comm)); 1209566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &B)); 1219566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, m, m, m, m)); 1229566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)mdn->A)->type_name)); 1239566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, (const PetscScalar **)&array)); 1249566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(B, array + m * rstart)); 1259566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, (const PetscScalar **)&array)); 1269566063dSJacob Faibussowitsch PetscCall(PetscObjectCompose((PetscObject)A, "DiagonalBlock", (PetscObject)B)); 12711bd1e4dSLisandro Dalcin *a = B; 1289566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 1292205254eSKarl Rupp } else *a = B; 1303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1310de54da6SSatish Balay } 1320de54da6SSatish Balay 13366976f2fSJacob Faibussowitsch static PetscErrorCode MatSetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv) 134d71ae5a4SJacob Faibussowitsch { 13539b7565bSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)mat->data; 136d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 137ace3abfcSBarry Smith PetscBool roworiented = A->roworiented; 1388965ea79SLois Curfman McInnes 1393a40ed3dSBarry Smith PetscFunctionBegin; 1408965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 1415ef9f2a5SBarry Smith if (idxm[i] < 0) continue; 14208401ef6SPierre Jolivet PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 1438965ea79SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 1448965ea79SLois Curfman McInnes row = idxm[i] - rstart; 14539b7565bSBarry Smith if (roworiented) { 146de0a9f35SPierre Jolivet PetscCall(MatSetValues(A->A, 1, &row, n, idxn, PetscSafePointerPlusOffset(v, i * n), addv)); 1473a40ed3dSBarry Smith } else { 1488965ea79SLois Curfman McInnes for (j = 0; j < n; j++) { 1495ef9f2a5SBarry Smith if (idxn[j] < 0) continue; 15008401ef6SPierre Jolivet PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 151de0a9f35SPierre Jolivet PetscCall(MatSetValues(A->A, 1, &row, 1, &idxn[j], PetscSafePointerPlusOffset(v, i + j * m), addv)); 15239b7565bSBarry Smith } 1538965ea79SLois Curfman McInnes } 1542205254eSKarl Rupp } else if (!A->donotstash) { 1555080c13bSMatthew G Knepley mat->assembled = PETSC_FALSE; 15639b7565bSBarry Smith if (roworiented) { 157de0a9f35SPierre Jolivet PetscCall(MatStashValuesRow_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i * n), PETSC_FALSE)); 158d36fbae8SSatish Balay } else { 159de0a9f35SPierre Jolivet PetscCall(MatStashValuesCol_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i), m, PETSC_FALSE)); 16039b7565bSBarry Smith } 161b49de8d1SLois Curfman McInnes } 162b49de8d1SLois Curfman McInnes } 1633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 164b49de8d1SLois Curfman McInnes } 165b49de8d1SLois Curfman McInnes 16666976f2fSJacob Faibussowitsch static PetscErrorCode MatGetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], PetscScalar v[]) 167d71ae5a4SJacob Faibussowitsch { 168b49de8d1SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 169d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 170b49de8d1SLois Curfman McInnes 1713a40ed3dSBarry Smith PetscFunctionBegin; 172b49de8d1SLois Curfman McInnes for (i = 0; i < m; i++) { 17354c59aa7SJacob Faibussowitsch if (idxm[i] < 0) continue; /* negative row */ 17454c59aa7SJacob Faibussowitsch PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 175b49de8d1SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 176b49de8d1SLois Curfman McInnes row = idxm[i] - rstart; 177b49de8d1SLois Curfman McInnes for (j = 0; j < n; j++) { 17854c59aa7SJacob Faibussowitsch if (idxn[j] < 0) continue; /* negative column */ 17954c59aa7SJacob Faibussowitsch PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1809566063dSJacob Faibussowitsch PetscCall(MatGetValues(mdn->A, 1, &row, 1, &idxn[j], v + i * n + j)); 181b49de8d1SLois Curfman McInnes } 182e7e72b3dSBarry Smith } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Only local values currently supported"); 1838965ea79SLois Curfman McInnes } 1843ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1858965ea79SLois Curfman McInnes } 1868965ea79SLois Curfman McInnes 187d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A, PetscInt *lda) 188d71ae5a4SJacob Faibussowitsch { 18949a6ff4bSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 19049a6ff4bSBarry Smith 19149a6ff4bSBarry Smith PetscFunctionBegin; 1929566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, lda)); 1933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19449a6ff4bSBarry Smith } 19549a6ff4bSBarry Smith 196d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A, PetscInt lda) 197d71ae5a4SJacob Faibussowitsch { 198ad16ce7aSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 19947d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 200ad16ce7aSStefano Zampini 201ad16ce7aSStefano Zampini PetscFunctionBegin; 20217359960SJose E. Roman if (!a->A) { 20328b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2049566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 2059566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 2069566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 2079566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N)); 208a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 20947d993e7Ssuyashtn PetscBool iscuda; 2109566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda)); 21147d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 212a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 21347d993e7Ssuyashtn PetscBool iship; 21447d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSEHIP, &iship)); 21547d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 21647d993e7Ssuyashtn #endif 21747d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 21817359960SJose E. Roman } 2199566063dSJacob Faibussowitsch PetscCall(MatDenseSetLDA(a->A, lda)); 2203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 221ad16ce7aSStefano Zampini } 222ad16ce7aSStefano Zampini 223d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArray_MPIDense(Mat A, PetscScalar **array) 224d71ae5a4SJacob Faibussowitsch { 225ff14e315SSatish Balay Mat_MPIDense *a = (Mat_MPIDense *)A->data; 226ff14e315SSatish Balay 2273a40ed3dSBarry Smith PetscFunctionBegin; 22828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2299566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, array)); 2303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 231ff14e315SSatish Balay } 232ff14e315SSatish Balay 233f1e99121SPierre Jolivet static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A, PetscScalar **array) 234d71ae5a4SJacob Faibussowitsch { 2358572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2368572280aSBarry Smith 2378572280aSBarry Smith PetscFunctionBegin; 23828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 239f1e99121SPierre Jolivet PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)array)); 2403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2418572280aSBarry Smith } 2428572280aSBarry Smith 243d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A, PetscScalar **array) 244d71ae5a4SJacob Faibussowitsch { 2456947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2466947451fSStefano Zampini 2476947451fSStefano Zampini PetscFunctionBegin; 24828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2499566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, array)); 2503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2516947451fSStefano Zampini } 2526947451fSStefano Zampini 253d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A, const PetscScalar *array) 254d71ae5a4SJacob Faibussowitsch { 255d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 256d3042a70SBarry Smith 257d3042a70SBarry Smith PetscFunctionBegin; 25828b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 25928b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2609566063dSJacob Faibussowitsch PetscCall(MatDensePlaceArray(a->A, array)); 2613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 262d3042a70SBarry Smith } 263d3042a70SBarry Smith 264d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseResetArray_MPIDense(Mat A) 265d71ae5a4SJacob Faibussowitsch { 266d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 267d3042a70SBarry Smith 268d3042a70SBarry Smith PetscFunctionBegin; 26928b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 27028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2719566063dSJacob Faibussowitsch PetscCall(MatDenseResetArray(a->A)); 2723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 273d3042a70SBarry Smith } 274d3042a70SBarry Smith 275d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A, const PetscScalar *array) 276d71ae5a4SJacob Faibussowitsch { 277d5ea218eSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 278d5ea218eSStefano Zampini 279d5ea218eSStefano Zampini PetscFunctionBegin; 28028b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 28128b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2829566063dSJacob Faibussowitsch PetscCall(MatDenseReplaceArray(a->A, array)); 2833ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 284d5ea218eSStefano Zampini } 285d5ea218eSStefano Zampini 286d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A, IS isrow, IS iscol, MatReuse scall, Mat *B) 287d71ae5a4SJacob Faibussowitsch { 288ca3fa75bSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data, *newmatd; 289637a0070SStefano Zampini PetscInt lda, i, j, rstart, rend, nrows, ncols, Ncols, nlrows, nlcols; 2905d0c19d7SBarry Smith const PetscInt *irow, *icol; 291637a0070SStefano Zampini const PetscScalar *v; 292637a0070SStefano Zampini PetscScalar *bv; 293ca3fa75bSLois Curfman McInnes Mat newmat; 2944aa3045dSJed Brown IS iscol_local; 29542a884f0SBarry Smith MPI_Comm comm_is, comm_mat; 296ca3fa75bSLois Curfman McInnes 297ca3fa75bSLois Curfman McInnes PetscFunctionBegin; 2989566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm_mat)); 2999566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)iscol, &comm_is)); 30008401ef6SPierre Jolivet PetscCheck(comm_mat == comm_is, PETSC_COMM_SELF, PETSC_ERR_ARG_NOTSAMECOMM, "IS communicator must match matrix communicator"); 30142a884f0SBarry Smith 3029566063dSJacob Faibussowitsch PetscCall(ISAllGather(iscol, &iscol_local)); 3039566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &irow)); 3049566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol_local, &icol)); 3059566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(isrow, &nrows)); 3069566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(iscol, &ncols)); 3079566063dSJacob Faibussowitsch PetscCall(ISGetSize(iscol, &Ncols)); /* global number of columns, size of iscol_local */ 308ca3fa75bSLois Curfman McInnes 309ca3fa75bSLois Curfman McInnes /* No parallel redistribution currently supported! Should really check each index set 310da81f932SPierre Jolivet to confirm that it is OK. ... Currently supports only submatrix same partitioning as 3117eba5e9cSLois Curfman McInnes original matrix! */ 312ca3fa75bSLois Curfman McInnes 3139566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &nlrows, &nlcols)); 3149566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRange(A, &rstart, &rend)); 315ca3fa75bSLois Curfman McInnes 316ca3fa75bSLois Curfman McInnes /* Check submatrix call */ 317ca3fa75bSLois Curfman McInnes if (scall == MAT_REUSE_MATRIX) { 318e32f2f54SBarry Smith /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */ 3197eba5e9cSLois Curfman McInnes /* Really need to test rows and column sizes! */ 320ca3fa75bSLois Curfman McInnes newmat = *B; 321ca3fa75bSLois Curfman McInnes } else { 322ca3fa75bSLois Curfman McInnes /* Create and fill new matrix */ 3239566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &newmat)); 3249566063dSJacob Faibussowitsch PetscCall(MatSetSizes(newmat, nrows, ncols, PETSC_DECIDE, Ncols)); 3259566063dSJacob Faibussowitsch PetscCall(MatSetType(newmat, ((PetscObject)A)->type_name)); 3269566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(newmat, NULL)); 327ca3fa75bSLois Curfman McInnes } 328ca3fa75bSLois Curfman McInnes 329ca3fa75bSLois Curfman McInnes /* Now extract the data pointers and do the copy, column at a time */ 330ca3fa75bSLois Curfman McInnes newmatd = (Mat_MPIDense *)newmat->data; 3319566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(newmatd->A, &bv)); 3329566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mat->A, &v)); 3339566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mat->A, &lda)); 3344aa3045dSJed Brown for (i = 0; i < Ncols; i++) { 335637a0070SStefano Zampini const PetscScalar *av = v + lda * icol[i]; 336ad540459SPierre Jolivet for (j = 0; j < nrows; j++) *bv++ = av[irow[j] - rstart]; 337ca3fa75bSLois Curfman McInnes } 3389566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mat->A, &v)); 3399566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(newmatd->A, &bv)); 340ca3fa75bSLois Curfman McInnes 341ca3fa75bSLois Curfman McInnes /* Assemble the matrices so that the correct flags are set */ 3429566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(newmat, MAT_FINAL_ASSEMBLY)); 3439566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(newmat, MAT_FINAL_ASSEMBLY)); 344ca3fa75bSLois Curfman McInnes 345ca3fa75bSLois Curfman McInnes /* Free work space */ 3469566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &irow)); 3479566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol_local, &icol)); 3489566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iscol_local)); 349ca3fa75bSLois Curfman McInnes *B = newmat; 3503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 351ca3fa75bSLois Curfman McInnes } 352ca3fa75bSLois Curfman McInnes 35366976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A, PetscScalar **array) 354d71ae5a4SJacob Faibussowitsch { 35573a71a0fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 35673a71a0fSBarry Smith 3573a40ed3dSBarry Smith PetscFunctionBegin; 3589566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, array)); 3593ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 360ff14e315SSatish Balay } 361ff14e315SSatish Balay 362f1e99121SPierre Jolivet static PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A, PetscScalar **array) 363d71ae5a4SJacob Faibussowitsch { 3648572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3658572280aSBarry Smith 3668572280aSBarry Smith PetscFunctionBegin; 367f1e99121SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)array)); 3683ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3698572280aSBarry Smith } 3708572280aSBarry Smith 37166976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A, PetscScalar **array) 372d71ae5a4SJacob Faibussowitsch { 3736947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3746947451fSStefano Zampini 3756947451fSStefano Zampini PetscFunctionBegin; 3769566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, array)); 3773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3786947451fSStefano Zampini } 3796947451fSStefano Zampini 38066976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat, MatAssemblyType mode) 381d71ae5a4SJacob Faibussowitsch { 38239ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 38313f74950SBarry Smith PetscInt nstash, reallocs; 3848965ea79SLois Curfman McInnes 3853a40ed3dSBarry Smith PetscFunctionBegin; 3863ba16761SJacob Faibussowitsch if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(PETSC_SUCCESS); 3878965ea79SLois Curfman McInnes 3889566063dSJacob Faibussowitsch PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); 3899566063dSJacob Faibussowitsch PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); 3909566063dSJacob Faibussowitsch PetscCall(PetscInfo(mdn->A, "Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n", nstash, reallocs)); 3913ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3928965ea79SLois Curfman McInnes } 3938965ea79SLois Curfman McInnes 39466976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat, MatAssemblyType mode) 395d71ae5a4SJacob Faibussowitsch { 39639ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 39713f74950SBarry Smith PetscInt i, *row, *col, flg, j, rstart, ncols; 39813f74950SBarry Smith PetscMPIInt n; 39987828ca2SBarry Smith PetscScalar *val; 4008965ea79SLois Curfman McInnes 4013a40ed3dSBarry Smith PetscFunctionBegin; 402910cf402Sprj- if (!mdn->donotstash && !mat->nooffprocentries) { 4038965ea79SLois Curfman McInnes /* wait on receives */ 4047ef1d9bdSSatish Balay while (1) { 4059566063dSJacob Faibussowitsch PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); 4067ef1d9bdSSatish Balay if (!flg) break; 4078965ea79SLois Curfman McInnes 4087ef1d9bdSSatish Balay for (i = 0; i < n;) { 4097ef1d9bdSSatish Balay /* Now identify the consecutive vals belonging to the same row */ 4102205254eSKarl Rupp for (j = i, rstart = row[j]; j < n; j++) { 4112205254eSKarl Rupp if (row[j] != rstart) break; 4122205254eSKarl Rupp } 4137ef1d9bdSSatish Balay if (j < n) ncols = j - i; 4147ef1d9bdSSatish Balay else ncols = n - i; 4157ef1d9bdSSatish Balay /* Now assemble all these values with a single function call */ 4169566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(mat, 1, row + i, ncols, col + i, val + i, mat->insertmode)); 4177ef1d9bdSSatish Balay i = j; 4188965ea79SLois Curfman McInnes } 4197ef1d9bdSSatish Balay } 4209566063dSJacob Faibussowitsch PetscCall(MatStashScatterEnd_Private(&mat->stash)); 421910cf402Sprj- } 4228965ea79SLois Curfman McInnes 4239566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mdn->A, mode)); 4249566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mdn->A, mode)); 4253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4268965ea79SLois Curfman McInnes } 4278965ea79SLois Curfman McInnes 42866976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroEntries_MPIDense(Mat A) 429d71ae5a4SJacob Faibussowitsch { 43039ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 4313a40ed3dSBarry Smith 4323a40ed3dSBarry Smith PetscFunctionBegin; 4339566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(l->A)); 4343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4358965ea79SLois Curfman McInnes } 4368965ea79SLois Curfman McInnes 43766976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroRows_MPIDense(Mat A, PetscInt n, const PetscInt rows[], PetscScalar diag, Vec x, Vec b) 438d71ae5a4SJacob Faibussowitsch { 43939ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 440637a0070SStefano Zampini PetscInt i, len, *lrows; 441637a0070SStefano Zampini 442637a0070SStefano Zampini PetscFunctionBegin; 443637a0070SStefano Zampini /* get locally owned rows */ 4449566063dSJacob Faibussowitsch PetscCall(PetscLayoutMapLocal(A->rmap, n, rows, &len, &lrows, NULL)); 445dd8e379bSPierre Jolivet /* fix right-hand side if needed */ 446637a0070SStefano Zampini if (x && b) { 44797b48c8fSBarry Smith const PetscScalar *xx; 44897b48c8fSBarry Smith PetscScalar *bb; 4498965ea79SLois Curfman McInnes 4509566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(x, &xx)); 4519566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(b, &bb)); 452637a0070SStefano Zampini for (i = 0; i < len; ++i) bb[lrows[i]] = diag * xx[lrows[i]]; 4539566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(x, &xx)); 4549566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(b, &bb)); 45597b48c8fSBarry Smith } 4569566063dSJacob Faibussowitsch PetscCall(MatZeroRows(l->A, len, lrows, 0.0, NULL, NULL)); 457e2eb51b1SBarry Smith if (diag != 0.0) { 458637a0070SStefano Zampini Vec d; 459b9679d65SBarry Smith 4609566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A, NULL, &d)); 4619566063dSJacob Faibussowitsch PetscCall(VecSet(d, diag)); 4629566063dSJacob Faibussowitsch PetscCall(MatDiagonalSet(A, d, INSERT_VALUES)); 4639566063dSJacob Faibussowitsch PetscCall(VecDestroy(&d)); 464b9679d65SBarry Smith } 4659566063dSJacob Faibussowitsch PetscCall(PetscFree(lrows)); 4663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4678965ea79SLois Curfman McInnes } 4688965ea79SLois Curfman McInnes 4690be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat, Vec, Vec); 4700be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat, Vec, Vec, Vec); 4710be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat, Vec, Vec); 4720be0d8bdSHansol Suh PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat, Vec, Vec, Vec); 4730be0d8bdSHansol Suh 474*d016bddeSToby Isaac static PetscErrorCode MatMultColumnRange_MPIDense(Mat mat, Vec xx, Vec yy, PetscInt c_start, PetscInt c_end) 475*d016bddeSToby Isaac { 476*d016bddeSToby Isaac Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 477*d016bddeSToby Isaac const PetscScalar *ax; 478*d016bddeSToby Isaac PetscScalar *ay; 479*d016bddeSToby Isaac PetscMemType axmtype, aymtype; 480*d016bddeSToby Isaac 481*d016bddeSToby Isaac PetscFunctionBegin; 482*d016bddeSToby Isaac if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 483*d016bddeSToby Isaac PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 484*d016bddeSToby Isaac PetscCall(VecGetArrayWriteAndMemType(mdn->lvec, &ay, &aymtype)); 485*d016bddeSToby Isaac PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 486*d016bddeSToby Isaac PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 487*d016bddeSToby Isaac PetscCall(VecRestoreArrayWriteAndMemType(mdn->lvec, &ay)); 488*d016bddeSToby Isaac PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 489*d016bddeSToby Isaac PetscUseMethod(mdn->A, "MatMultColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (mdn->A, mdn->lvec, yy, c_start, c_end)); 490*d016bddeSToby Isaac PetscFunctionReturn(PETSC_SUCCESS); 491*d016bddeSToby Isaac } 492*d016bddeSToby Isaac 49366976f2fSJacob Faibussowitsch static PetscErrorCode MatMult_MPIDense(Mat mat, Vec xx, Vec yy) 494d71ae5a4SJacob Faibussowitsch { 49539ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 496637a0070SStefano Zampini const PetscScalar *ax; 497637a0070SStefano Zampini PetscScalar *ay; 498d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 499c456f294SBarry Smith 5003a40ed3dSBarry Smith PetscFunctionBegin; 5016f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5029566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 503*d016bddeSToby Isaac PetscCall(VecGetArrayWriteAndMemType(mdn->lvec, &ay, &aymtype)); 5049566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5059566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 506*d016bddeSToby Isaac PetscCall(VecRestoreArrayWriteAndMemType(mdn->lvec, &ay)); 5079566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5089566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->mult)(mdn->A, mdn->lvec, yy)); 5093ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5108965ea79SLois Curfman McInnes } 5118965ea79SLois Curfman McInnes 5120be0d8bdSHansol Suh static PetscErrorCode MatMultAddColumnRange_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz, PetscInt c_start, PetscInt c_end) 5130be0d8bdSHansol Suh { 5140be0d8bdSHansol Suh Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 5150be0d8bdSHansol Suh const PetscScalar *ax; 5160be0d8bdSHansol Suh PetscScalar *ay; 5170be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 5180be0d8bdSHansol Suh 5190be0d8bdSHansol Suh PetscFunctionBegin; 5200be0d8bdSHansol Suh if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5210be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 5220be0d8bdSHansol Suh PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 5230be0d8bdSHansol Suh PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5240be0d8bdSHansol Suh PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 5250be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 5260be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5270be0d8bdSHansol Suh PetscUseMethod(mdn->A, "MatMultAddColumnRange_C", (Mat, Vec, Vec, Vec, PetscInt, PetscInt), (mdn->A, mdn->lvec, yy, zz, c_start, c_end)); 5280be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 5290be0d8bdSHansol Suh } 5300be0d8bdSHansol Suh 53166976f2fSJacob Faibussowitsch static PetscErrorCode MatMultAdd_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz) 532d71ae5a4SJacob Faibussowitsch { 53339ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 534637a0070SStefano Zampini const PetscScalar *ax; 535637a0070SStefano Zampini PetscScalar *ay; 536d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 537c456f294SBarry Smith 5383a40ed3dSBarry Smith PetscFunctionBegin; 5396f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 5409566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 5419566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 5429566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 5439566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 5449566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 5459566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5469566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->multadd)(mdn->A, mdn->lvec, yy, zz)); 5473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5488965ea79SLois Curfman McInnes } 5498965ea79SLois Curfman McInnes 5500be0d8bdSHansol Suh static PetscErrorCode MatMultHermitianTransposeColumnRange_MPIDense(Mat A, Vec xx, Vec yy, PetscInt c_start, PetscInt c_end) 5510be0d8bdSHansol Suh { 5520be0d8bdSHansol Suh Mat_MPIDense *a = (Mat_MPIDense *)A->data; 5530be0d8bdSHansol Suh const PetscScalar *ax; 5540be0d8bdSHansol Suh PetscScalar *ay; 5550be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 556*d016bddeSToby Isaac PetscInt r_start, r_end; 557*d016bddeSToby Isaac PetscInt c_start_local, c_end_local; 5580be0d8bdSHansol Suh 5590be0d8bdSHansol Suh PetscFunctionBegin; 5600be0d8bdSHansol Suh if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 561*d016bddeSToby Isaac PetscCall(VecZeroEntries(a->lvec)); 562*d016bddeSToby Isaac PetscCall(VecGetOwnershipRange(yy, &r_start, &r_end)); 563*d016bddeSToby Isaac c_start_local = PetscMax(c_start, r_start); 564*d016bddeSToby Isaac c_end_local = PetscMin(c_end, r_end); 565*d016bddeSToby Isaac PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 566*d016bddeSToby Isaac if (c_end_local > c_start_local) { 567*d016bddeSToby Isaac if (PetscMemTypeHost(aymtype)) { 568*d016bddeSToby Isaac PetscCall(PetscArrayzero(&ay[c_start_local], (size_t)(c_end_local - c_start_local))); 569*d016bddeSToby Isaac } else { 570*d016bddeSToby Isaac PetscCall(PetscDeviceRegisterMemory(ay, aymtype, sizeof(*ay) * ((size_t)(r_end - r_start)))); 571*d016bddeSToby Isaac PetscCall(PetscDeviceArrayZero(NULL, &ay[c_start_local], (size_t)(c_end_local - c_start_local))); 572*d016bddeSToby Isaac } 573*d016bddeSToby Isaac } 5740be0d8bdSHansol Suh PetscUseMethod(a->A, "MatMultHermitianTransposeColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (a->A, xx, a->lvec, c_start, c_end)); 5750be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5760be0d8bdSHansol Suh PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5770be0d8bdSHansol Suh PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5780be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5790be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 5800be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 5810be0d8bdSHansol Suh } 5820be0d8bdSHansol Suh 583459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeKernel_MPIDense(Mat A, Vec xx, Vec yy, PetscBool herm) 584d71ae5a4SJacob Faibussowitsch { 585096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 586637a0070SStefano Zampini const PetscScalar *ax; 587637a0070SStefano Zampini PetscScalar *ay; 588d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 5894d86920dSPierre Jolivet 5903a40ed3dSBarry Smith PetscFunctionBegin; 5916f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 5929566063dSJacob Faibussowitsch PetscCall(VecSet(yy, 0.0)); 593459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 594459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 5959566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5969566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 5979566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5989566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5999566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 6009566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 6013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 602096963f5SLois Curfman McInnes } 603096963f5SLois Curfman McInnes 6040be0d8bdSHansol Suh static PetscErrorCode MatMultHermitianTransposeAddColumnRange_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscInt c_start, PetscInt c_end) 6050be0d8bdSHansol Suh { 6060be0d8bdSHansol Suh Mat_MPIDense *a = (Mat_MPIDense *)A->data; 6070be0d8bdSHansol Suh const PetscScalar *ax; 6080be0d8bdSHansol Suh PetscScalar *ay; 6090be0d8bdSHansol Suh PetscMemType axmtype, aymtype; 6100be0d8bdSHansol Suh 6110be0d8bdSHansol Suh PetscFunctionBegin; 6120be0d8bdSHansol Suh if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 6130be0d8bdSHansol Suh PetscCall(VecCopy(yy, zz)); 614*d016bddeSToby Isaac PetscCall(VecZeroEntries(a->lvec)); 6150be0d8bdSHansol Suh PetscUseMethod(a->A, "MatMultHermitianTransposeColumnRange_C", (Mat, Vec, Vec, PetscInt, PetscInt), (a->A, xx, a->lvec, c_start, c_end)); 6160be0d8bdSHansol Suh PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 6170be0d8bdSHansol Suh PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 6180be0d8bdSHansol Suh PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 6190be0d8bdSHansol Suh PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 6200be0d8bdSHansol Suh PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 6210be0d8bdSHansol Suh PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 6220be0d8bdSHansol Suh PetscFunctionReturn(PETSC_SUCCESS); 6230be0d8bdSHansol Suh } 6240be0d8bdSHansol Suh 625459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAddKernel_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscBool herm) 626d71ae5a4SJacob Faibussowitsch { 627096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 628637a0070SStefano Zampini const PetscScalar *ax; 629637a0070SStefano Zampini PetscScalar *ay; 630d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 631096963f5SLois Curfman McInnes 6323a40ed3dSBarry Smith PetscFunctionBegin; 6336f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 6349566063dSJacob Faibussowitsch PetscCall(VecCopy(yy, zz)); 635459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 636459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 6379566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 6389566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 6399566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 6409566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 6419566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 6429566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 6433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 644096963f5SLois Curfman McInnes } 645096963f5SLois Curfman McInnes 646459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTranspose_MPIDense(Mat A, Vec xx, Vec yy) 647459e8d23SBlanca Mellado Pinto { 648459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 649459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_FALSE)); 650459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 651459e8d23SBlanca Mellado Pinto } 652459e8d23SBlanca Mellado Pinto 653459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 654459e8d23SBlanca Mellado Pinto { 655459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 656459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_FALSE)); 657459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 658459e8d23SBlanca Mellado Pinto } 659459e8d23SBlanca Mellado Pinto 660459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTranspose_MPIDense(Mat A, Vec xx, Vec yy) 661459e8d23SBlanca Mellado Pinto { 662459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 663459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_TRUE)); 664459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 665459e8d23SBlanca Mellado Pinto } 666459e8d23SBlanca Mellado Pinto 667459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 668459e8d23SBlanca Mellado Pinto { 669459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 670459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_TRUE)); 671459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 672459e8d23SBlanca Mellado Pinto } 673459e8d23SBlanca Mellado Pinto 674d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetDiagonal_MPIDense(Mat A, Vec v) 675d71ae5a4SJacob Faibussowitsch { 67639ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 67779560b15SJacob Faibussowitsch PetscInt lda, len, i, nl, ng, m = A->rmap->n, radd; 67879560b15SJacob Faibussowitsch PetscScalar *x; 679637a0070SStefano Zampini const PetscScalar *av; 680ed3cc1f0SBarry Smith 6813a40ed3dSBarry Smith PetscFunctionBegin; 6829566063dSJacob Faibussowitsch PetscCall(VecGetArray(v, &x)); 68379560b15SJacob Faibussowitsch PetscCall(VecGetSize(v, &ng)); 68479560b15SJacob Faibussowitsch PetscCheck(ng == A->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming mat and vec"); 68579560b15SJacob Faibussowitsch PetscCall(VecGetLocalSize(v, &nl)); 686d0f46423SBarry Smith len = PetscMin(a->A->rmap->n, a->A->cmap->n); 687d0f46423SBarry Smith radd = A->rmap->rstart * m; 6889566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 6899566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 690ad540459SPierre Jolivet for (i = 0; i < len; i++) x[i] = av[radd + i * lda + i]; 6919566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 6920be0d8bdSHansol Suh if (nl - i > 0) PetscCall(PetscArrayzero(x + i, nl - i)); 6939566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(v, &x)); 6943ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6958965ea79SLois Curfman McInnes } 6968965ea79SLois Curfman McInnes 69766976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MPIDense(Mat mat) 698d71ae5a4SJacob Faibussowitsch { 6993501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 700ed3cc1f0SBarry Smith 7013a40ed3dSBarry Smith PetscFunctionBegin; 7023ba16761SJacob Faibussowitsch PetscCall(PetscLogObjectState((PetscObject)mat, "Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT, mat->rmap->N, mat->cmap->N)); 7039566063dSJacob Faibussowitsch PetscCall(MatStashDestroy_Private(&mat->stash)); 70428b400f6SJacob Faibussowitsch PetscCheck(!mdn->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 70528b400f6SJacob Faibussowitsch PetscCheck(!mdn->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 7069566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->A)); 7079566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->lvec)); 7089566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&mdn->Mvctx)); 7099566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->cvec)); 7109566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->cmat)); 71101b82886SBarry Smith 7129566063dSJacob Faibussowitsch PetscCall(PetscFree(mat->data)); 7139566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, NULL)); 7148baccfbdSHong Zhang 7159566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", NULL)); 7169566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", NULL)); 7179566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", NULL)); 7189566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", NULL)); 7199566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", NULL)); 7209566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", NULL)); 7219566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", NULL)); 7229566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", NULL)); 7239566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", NULL)); 7249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", NULL)); 7259566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", NULL)); 7269566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", NULL)); 7279566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", NULL)); 7288baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 7299566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", NULL)); 7308baccfbdSHong Zhang #endif 731d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 7329566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", NULL)); 733d24d4204SJose E. Roman #endif 7349566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", NULL)); 7359566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", NULL)); 7369566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", NULL)); 7376718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 7389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", NULL)); 7399566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", NULL)); 7402e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", NULL)); 7412e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensecuda_mpidense_C", NULL)); 7422e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL)); 7432e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL)); 7442e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL)); 7452e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL)); 7462e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArray_C", NULL)); 7472e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayRead_C", NULL)); 7482e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayWrite_C", NULL)); 7492e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArray_C", NULL)); 7502e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayRead_C", NULL)); 7512e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayWrite_C", NULL)); 7522e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAPlaceArray_C", NULL)); 7532e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAResetArray_C", NULL)); 7542e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAReplaceArray_C", NULL)); 7553d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDASetPreallocation_C", NULL)); 7566718818eSStefano Zampini #endif 75747d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 75847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", NULL)); 75947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", NULL)); 76047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", NULL)); 76147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensehip_mpidense_C", NULL)); 76247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensehip_C", NULL)); 76347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidensehip_C", NULL)); 76447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaij_C", NULL)); 76547d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaijhipsparse_C", NULL)); 76647d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArray_C", NULL)); 76747d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayRead_C", NULL)); 76847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayWrite_C", NULL)); 76947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArray_C", NULL)); 77047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayRead_C", NULL)); 77147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayWrite_C", NULL)); 77247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPPlaceArray_C", NULL)); 77347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPResetArray_C", NULL)); 77447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPReplaceArray_C", NULL)); 7753d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPSetPreallocation_C", NULL)); 77647d993e7Ssuyashtn #endif 7779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", NULL)); 7789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", NULL)); 7799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", NULL)); 7809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", NULL)); 7819566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", NULL)); 7829566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", NULL)); 7839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", NULL)); 7849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", NULL)); 7859566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", NULL)); 7869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", NULL)); 787*d016bddeSToby Isaac PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultColumnRange_C", NULL)); 7880be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultAddColumnRange_C", NULL)); 7890be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeColumnRange_C", NULL)); 7900be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeAddColumnRange_C", NULL)); 791f8103e6bSStefano Zampini 792f8103e6bSStefano Zampini PetscCall(PetscObjectCompose((PetscObject)mat, "DiagonalBlock", NULL)); 7933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7948965ea79SLois Curfman McInnes } 79539ddd567SLois Curfman McInnes 7969804daf3SBarry Smith #include <petscdraw.h> 797d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat, PetscViewer viewer) 798d71ae5a4SJacob Faibussowitsch { 79939ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 800616b8fbbSStefano Zampini PetscMPIInt rank; 80119fd82e9SBarry Smith PetscViewerType vtype; 802ace3abfcSBarry Smith PetscBool iascii, isdraw; 803b0a32e0cSBarry Smith PetscViewer sviewer; 804f3ef73ceSBarry Smith PetscViewerFormat format; 8058965ea79SLois Curfman McInnes 8063a40ed3dSBarry Smith PetscFunctionBegin; 8079566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat), &rank)); 8089566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 8099566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 81032077d6dSBarry Smith if (iascii) { 8119566063dSJacob Faibussowitsch PetscCall(PetscViewerGetType(viewer, &vtype)); 8129566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 813456192e2SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 8144e220ebcSLois Curfman McInnes MatInfo info; 8159566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mat, MAT_LOCAL, &info)); 8169566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 8179371c9d4SSatish Balay PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, " [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n", rank, mat->rmap->n, (PetscInt)info.nz_used, (PetscInt)info.nz_allocated, 8189371c9d4SSatish Balay (PetscInt)info.memory)); 8199566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 8209566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 8216f08ad05SPierre Jolivet if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx, viewer)); 8223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 823fb9695e5SSatish Balay } else if (format == PETSC_VIEWER_ASCII_INFO) { 8243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8258965ea79SLois Curfman McInnes } 826f1af5d2fSBarry Smith } else if (isdraw) { 827b0a32e0cSBarry Smith PetscDraw draw; 828ace3abfcSBarry Smith PetscBool isnull; 829f1af5d2fSBarry Smith 8309566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw)); 8319566063dSJacob Faibussowitsch PetscCall(PetscDrawIsNull(draw, &isnull)); 8323ba16761SJacob Faibussowitsch if (isnull) PetscFunctionReturn(PETSC_SUCCESS); 833f1af5d2fSBarry Smith } 83477ed5343SBarry Smith 8357da1fb6eSBarry Smith { 8368965ea79SLois Curfman McInnes /* assemble the entire matrix onto first processor. */ 8378965ea79SLois Curfman McInnes Mat A; 838d0f46423SBarry Smith PetscInt M = mat->rmap->N, N = mat->cmap->N, m, row, i, nz; 839ba8c8a56SBarry Smith PetscInt *cols; 840ba8c8a56SBarry Smith PetscScalar *vals; 8418965ea79SLois Curfman McInnes 8429566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &A)); 843dd400576SPatrick Sanan if (rank == 0) { 8449566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, M, N, M, N)); 8453a40ed3dSBarry Smith } else { 8469566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, 0, 0, M, N)); 8478965ea79SLois Curfman McInnes } 8487adad957SLisandro Dalcin /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */ 8499566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATMPIDENSE)); 8509566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 8518965ea79SLois Curfman McInnes 85239ddd567SLois Curfman McInnes /* Copy the matrix ... This isn't the most efficient means, 85339ddd567SLois Curfman McInnes but it's quick for now */ 85451022da4SBarry Smith A->insertmode = INSERT_VALUES; 8552205254eSKarl Rupp 8562205254eSKarl Rupp row = mat->rmap->rstart; 8572205254eSKarl Rupp m = mdn->A->rmap->n; 8588965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 8599566063dSJacob Faibussowitsch PetscCall(MatGetRow_MPIDense(mat, row, &nz, &cols, &vals)); 8609566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(A, 1, &row, nz, cols, vals, INSERT_VALUES)); 8619566063dSJacob Faibussowitsch PetscCall(MatRestoreRow_MPIDense(mat, row, &nz, &cols, &vals)); 86239ddd567SLois Curfman McInnes row++; 8638965ea79SLois Curfman McInnes } 8648965ea79SLois Curfman McInnes 8659566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 8669566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 8679566063dSJacob Faibussowitsch PetscCall(PetscViewerGetSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 868dd400576SPatrick Sanan if (rank == 0) { 869f4f49eeaSPierre Jolivet PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense *)A->data)->A, ((PetscObject)mat)->name)); 870f4f49eeaSPierre Jolivet PetscCall(MatView_SeqDense(((Mat_MPIDense *)A->data)->A, sviewer)); 8718965ea79SLois Curfman McInnes } 8729566063dSJacob Faibussowitsch PetscCall(PetscViewerRestoreSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 8739566063dSJacob Faibussowitsch PetscCall(MatDestroy(&A)); 8748965ea79SLois Curfman McInnes } 8753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8768965ea79SLois Curfman McInnes } 8778965ea79SLois Curfman McInnes 87866976f2fSJacob Faibussowitsch static PetscErrorCode MatView_MPIDense(Mat mat, PetscViewer viewer) 879d71ae5a4SJacob Faibussowitsch { 880ace3abfcSBarry Smith PetscBool iascii, isbinary, isdraw, issocket; 8818965ea79SLois Curfman McInnes 882433994e6SBarry Smith PetscFunctionBegin; 8839566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 8849566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 8859566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSOCKET, &issocket)); 8869566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 8870f5bd95cSBarry Smith 88832077d6dSBarry Smith if (iascii || issocket || isdraw) { 8899566063dSJacob Faibussowitsch PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat, viewer)); 8901baa6e33SBarry Smith } else if (isbinary) PetscCall(MatView_Dense_Binary(mat, viewer)); 8913ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8928965ea79SLois Curfman McInnes } 8938965ea79SLois Curfman McInnes 89466976f2fSJacob Faibussowitsch static PetscErrorCode MatGetInfo_MPIDense(Mat A, MatInfoType flag, MatInfo *info) 895d71ae5a4SJacob Faibussowitsch { 8963501a2bdSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 8973501a2bdSLois Curfman McInnes Mat mdn = mat->A; 8983966268fSBarry Smith PetscLogDouble isend[5], irecv[5]; 8998965ea79SLois Curfman McInnes 9003a40ed3dSBarry Smith PetscFunctionBegin; 9014e220ebcSLois Curfman McInnes info->block_size = 1.0; 9022205254eSKarl Rupp 9039566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mdn, MAT_LOCAL, info)); 9042205254eSKarl Rupp 9059371c9d4SSatish Balay isend[0] = info->nz_used; 9069371c9d4SSatish Balay isend[1] = info->nz_allocated; 9079371c9d4SSatish Balay isend[2] = info->nz_unneeded; 9089371c9d4SSatish Balay isend[3] = info->memory; 9099371c9d4SSatish Balay isend[4] = info->mallocs; 9108965ea79SLois Curfman McInnes if (flag == MAT_LOCAL) { 9114e220ebcSLois Curfman McInnes info->nz_used = isend[0]; 9124e220ebcSLois Curfman McInnes info->nz_allocated = isend[1]; 9134e220ebcSLois Curfman McInnes info->nz_unneeded = isend[2]; 9144e220ebcSLois Curfman McInnes info->memory = isend[3]; 9154e220ebcSLois Curfman McInnes info->mallocs = isend[4]; 9168965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_MAX) { 917462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_MAX, PetscObjectComm((PetscObject)A))); 9182205254eSKarl Rupp 9194e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 9204e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 9214e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 9224e220ebcSLois Curfman McInnes info->memory = irecv[3]; 9234e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 9248965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_SUM) { 925462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_SUM, PetscObjectComm((PetscObject)A))); 9262205254eSKarl Rupp 9274e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 9284e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 9294e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 9304e220ebcSLois Curfman McInnes info->memory = irecv[3]; 9314e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 9328965ea79SLois Curfman McInnes } 9334e220ebcSLois Curfman McInnes info->fill_ratio_given = 0; /* no parallel LU/ILU/Cholesky */ 9344e220ebcSLois Curfman McInnes info->fill_ratio_needed = 0; 9354e220ebcSLois Curfman McInnes info->factor_mallocs = 0; 9363ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9378965ea79SLois Curfman McInnes } 9388965ea79SLois Curfman McInnes 93966976f2fSJacob Faibussowitsch static PetscErrorCode MatSetOption_MPIDense(Mat A, MatOption op, PetscBool flg) 940d71ae5a4SJacob Faibussowitsch { 94139ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 9428965ea79SLois Curfman McInnes 9433a40ed3dSBarry Smith PetscFunctionBegin; 94412c028f9SKris Buschelman switch (op) { 945512a5fc5SBarry Smith case MAT_NEW_NONZERO_LOCATIONS: 94612c028f9SKris Buschelman case MAT_NEW_NONZERO_LOCATION_ERR: 94712c028f9SKris Buschelman case MAT_NEW_NONZERO_ALLOCATION_ERR: 94843674050SBarry Smith MatCheckPreallocated(A, 1); 9499566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 95012c028f9SKris Buschelman break; 95112c028f9SKris Buschelman case MAT_ROW_ORIENTED: 95243674050SBarry Smith MatCheckPreallocated(A, 1); 9534e0d8c25SBarry Smith a->roworiented = flg; 9549566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 95512c028f9SKris Buschelman break; 956d71ae5a4SJacob Faibussowitsch case MAT_IGNORE_OFF_PROC_ENTRIES: 957d71ae5a4SJacob Faibussowitsch a->donotstash = flg; 958d71ae5a4SJacob Faibussowitsch break; 95977e54ba9SKris Buschelman case MAT_SYMMETRIC: 96077e54ba9SKris Buschelman case MAT_STRUCTURALLY_SYMMETRIC: 9619a4540c5SBarry Smith case MAT_HERMITIAN: 9629a4540c5SBarry Smith case MAT_SYMMETRY_ETERNAL: 963b94d7dedSBarry Smith case MAT_STRUCTURAL_SYMMETRY_ETERNAL: 964b94d7dedSBarry Smith case MAT_SPD: 965b94d7dedSBarry Smith case MAT_SPD_ETERNAL: 966b94d7dedSBarry Smith /* if the diagonal matrix is square it inherits some of the properties above */ 9679725ddffSPierre Jolivet if (a->A && A->rmap->n == A->cmap->n) PetscCall(MatSetOption(a->A, op, flg)); 96877e54ba9SKris Buschelman break; 969d71ae5a4SJacob Faibussowitsch default: 970888c827cSStefano Zampini break; 9713a40ed3dSBarry Smith } 9723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9738965ea79SLois Curfman McInnes } 9748965ea79SLois Curfman McInnes 97566976f2fSJacob Faibussowitsch static PetscErrorCode MatDiagonalScale_MPIDense(Mat A, Vec ll, Vec rr) 976d71ae5a4SJacob Faibussowitsch { 9775b2fa520SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 978637a0070SStefano Zampini const PetscScalar *l; 979637a0070SStefano Zampini PetscScalar x, *v, *vv, *r; 980637a0070SStefano Zampini PetscInt i, j, s2a, s3a, s2, s3, m = mdn->A->rmap->n, n = mdn->A->cmap->n, lda; 9815b2fa520SLois Curfman McInnes 9825b2fa520SLois Curfman McInnes PetscFunctionBegin; 9839566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(mdn->A, &vv)); 9849566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mdn->A, &lda)); 9859566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &s2, &s3)); 9865b2fa520SLois Curfman McInnes if (ll) { 9879566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(ll, &s2a)); 98808401ef6SPierre Jolivet PetscCheck(s2a == s2, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2); 9899566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(ll, &l)); 9905b2fa520SLois Curfman McInnes for (i = 0; i < m; i++) { 9915b2fa520SLois Curfman McInnes x = l[i]; 992637a0070SStefano Zampini v = vv + i; 9939371c9d4SSatish Balay for (j = 0; j < n; j++) { 9949371c9d4SSatish Balay (*v) *= x; 9959371c9d4SSatish Balay v += lda; 9969371c9d4SSatish Balay } 9975b2fa520SLois Curfman McInnes } 9989566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(ll, &l)); 9999566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 10005b2fa520SLois Curfman McInnes } 10015b2fa520SLois Curfman McInnes if (rr) { 1002637a0070SStefano Zampini const PetscScalar *ar; 1003637a0070SStefano Zampini 10049566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(rr, &s3a)); 100508401ef6SPierre Jolivet PetscCheck(s3a == s3, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3); 10069566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(rr, &ar)); 10076f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 10089566063dSJacob Faibussowitsch PetscCall(VecGetArray(mdn->lvec, &r)); 10099566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 10109566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 10119566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(rr, &ar)); 10125b2fa520SLois Curfman McInnes for (i = 0; i < n; i++) { 10135b2fa520SLois Curfman McInnes x = r[i]; 1014637a0070SStefano Zampini v = vv + i * lda; 10152205254eSKarl Rupp for (j = 0; j < m; j++) (*v++) *= x; 10165b2fa520SLois Curfman McInnes } 10179566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(mdn->lvec, &r)); 10189566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 10195b2fa520SLois Curfman McInnes } 10209566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(mdn->A, &vv)); 10213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10225b2fa520SLois Curfman McInnes } 10235b2fa520SLois Curfman McInnes 102466976f2fSJacob Faibussowitsch static PetscErrorCode MatNorm_MPIDense(Mat A, NormType type, PetscReal *nrm) 1025d71ae5a4SJacob Faibussowitsch { 10263501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 102713f74950SBarry Smith PetscInt i, j; 1028e91c04dfSPierre Jolivet PetscMPIInt size; 1029329f5518SBarry Smith PetscReal sum = 0.0; 1030637a0070SStefano Zampini const PetscScalar *av, *v; 10313501a2bdSLois Curfman McInnes 10323a40ed3dSBarry Smith PetscFunctionBegin; 10339566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, &av)); 1034637a0070SStefano Zampini v = av; 10359566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1036616b8fbbSStefano Zampini if (size == 1) { 10379566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, nrm)); 10383501a2bdSLois Curfman McInnes } else { 10393501a2bdSLois Curfman McInnes if (type == NORM_FROBENIUS) { 1040d0f46423SBarry Smith for (i = 0; i < mdn->A->cmap->n * mdn->A->rmap->n; i++) { 10419371c9d4SSatish Balay sum += PetscRealPart(PetscConj(*v) * (*v)); 10429371c9d4SSatish Balay v++; 10433501a2bdSLois Curfman McInnes } 1044462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(&sum, nrm, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 10458f1a2a5eSBarry Smith *nrm = PetscSqrtReal(*nrm); 10469566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * mdn->A->cmap->n * mdn->A->rmap->n)); 10473a40ed3dSBarry Smith } else if (type == NORM_1) { 1048e91c04dfSPierre Jolivet PetscReal *tmp; 1049e91c04dfSPierre Jolivet 1050e91c04dfSPierre Jolivet PetscCall(PetscCalloc1(A->cmap->N, &tmp)); 1051064f8208SBarry Smith *nrm = 0.0; 1052637a0070SStefano Zampini v = av; 1053d0f46423SBarry Smith for (j = 0; j < mdn->A->cmap->n; j++) { 1054d0f46423SBarry Smith for (i = 0; i < mdn->A->rmap->n; i++) { 10559371c9d4SSatish Balay tmp[j] += PetscAbsScalar(*v); 10569371c9d4SSatish Balay v++; 10573501a2bdSLois Curfman McInnes } 10583501a2bdSLois Curfman McInnes } 1059e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, tmp, A->cmap->N, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 1060d0f46423SBarry Smith for (j = 0; j < A->cmap->N; j++) { 1061e91c04dfSPierre Jolivet if (tmp[j] > *nrm) *nrm = tmp[j]; 10623501a2bdSLois Curfman McInnes } 1063e91c04dfSPierre Jolivet PetscCall(PetscFree(tmp)); 10649566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(A->cmap->n * A->rmap->n)); 10653a40ed3dSBarry Smith } else if (type == NORM_INFINITY) { /* max row norm */ 1066e91c04dfSPierre Jolivet PetscCall(MatNorm(mdn->A, type, nrm)); 1067e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, nrm, 1, MPIU_REAL, MPIU_MAX, PetscObjectComm((PetscObject)A))); 1068ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for two norm"); 10693501a2bdSLois Curfman McInnes } 10709566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, &av)); 10713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 10723501a2bdSLois Curfman McInnes } 10733501a2bdSLois Curfman McInnes 107466976f2fSJacob Faibussowitsch static PetscErrorCode MatTranspose_MPIDense(Mat A, MatReuse reuse, Mat *matout) 1075d71ae5a4SJacob Faibussowitsch { 10763501a2bdSLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10773501a2bdSLois Curfman McInnes Mat B; 1078d0f46423SBarry Smith PetscInt M = A->rmap->N, N = A->cmap->N, m, n, *rwork, rstart = A->rmap->rstart; 1079637a0070SStefano Zampini PetscInt j, i, lda; 108087828ca2SBarry Smith PetscScalar *v; 10813501a2bdSLois Curfman McInnes 10823a40ed3dSBarry Smith PetscFunctionBegin; 10837fb60732SBarry Smith if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *matout)); 1084cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { 10859566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 10869566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->cmap->n, A->rmap->n, N, M)); 10879566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)A)->type_name)); 10889566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(B, NULL)); 1089637a0070SStefano Zampini } else B = *matout; 10903501a2bdSLois Curfman McInnes 10919371c9d4SSatish Balay m = a->A->rmap->n; 10929371c9d4SSatish Balay n = a->A->cmap->n; 10939566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)&v)); 10949566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 10959566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &rwork)); 10963501a2bdSLois Curfman McInnes for (i = 0; i < m; i++) rwork[i] = rstart + i; 10971acff37aSSatish Balay for (j = 0; j < n; j++) { 10989566063dSJacob Faibussowitsch PetscCall(MatSetValues(B, 1, &j, m, rwork, v, INSERT_VALUES)); 10998e3a54c0SPierre Jolivet v = PetscSafePointerPlusOffset(v, lda); 11003501a2bdSLois Curfman McInnes } 11019566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)&v)); 11029566063dSJacob Faibussowitsch PetscCall(PetscFree(rwork)); 11039566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 11049566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 1105cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) { 11063501a2bdSLois Curfman McInnes *matout = B; 11073501a2bdSLois Curfman McInnes } else { 11089566063dSJacob Faibussowitsch PetscCall(MatHeaderMerge(A, &B)); 11093501a2bdSLois Curfman McInnes } 11103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1111096963f5SLois Curfman McInnes } 1112096963f5SLois Curfman McInnes 11136849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat, MatDuplicateOption, Mat *); 111452c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat, PetscScalar); 11158965ea79SLois Curfman McInnes 111666976f2fSJacob Faibussowitsch static PetscErrorCode MatSetUp_MPIDense(Mat A) 1117d71ae5a4SJacob Faibussowitsch { 1118273d9f13SBarry Smith PetscFunctionBegin; 11199566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 11209566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 112148a46eb9SPierre Jolivet if (!A->preallocated) PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 11223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1123273d9f13SBarry Smith } 1124273d9f13SBarry Smith 112566976f2fSJacob Faibussowitsch static PetscErrorCode MatAXPY_MPIDense(Mat Y, PetscScalar alpha, Mat X, MatStructure str) 1126d71ae5a4SJacob Faibussowitsch { 1127488007eeSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)Y->data, *B = (Mat_MPIDense *)X->data; 1128488007eeSBarry Smith 1129488007eeSBarry Smith PetscFunctionBegin; 11309566063dSJacob Faibussowitsch PetscCall(MatAXPY(A->A, alpha, B->A, str)); 11313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1132488007eeSBarry Smith } 1133488007eeSBarry Smith 113466976f2fSJacob Faibussowitsch static PetscErrorCode MatConjugate_MPIDense(Mat mat) 1135d71ae5a4SJacob Faibussowitsch { 1136ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 1137ba337c44SJed Brown 1138ba337c44SJed Brown PetscFunctionBegin; 11399566063dSJacob Faibussowitsch PetscCall(MatConjugate(a->A)); 11403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1141ba337c44SJed Brown } 1142ba337c44SJed Brown 114366976f2fSJacob Faibussowitsch static PetscErrorCode MatRealPart_MPIDense(Mat A) 1144d71ae5a4SJacob Faibussowitsch { 1145ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1146ba337c44SJed Brown 1147ba337c44SJed Brown PetscFunctionBegin; 11489566063dSJacob Faibussowitsch PetscCall(MatRealPart(a->A)); 11493ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1150ba337c44SJed Brown } 1151ba337c44SJed Brown 115266976f2fSJacob Faibussowitsch static PetscErrorCode MatImaginaryPart_MPIDense(Mat A) 1153d71ae5a4SJacob Faibussowitsch { 1154ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1155ba337c44SJed Brown 1156ba337c44SJed Brown PetscFunctionBegin; 11579566063dSJacob Faibussowitsch PetscCall(MatImaginaryPart(a->A)); 11583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1159ba337c44SJed Brown } 1160ba337c44SJed Brown 1161d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetColumnVector_MPIDense(Mat A, Vec v, PetscInt col) 1162d71ae5a4SJacob Faibussowitsch { 1163637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 116449a6ff4bSBarry Smith 116549a6ff4bSBarry Smith PetscFunctionBegin; 116628b400f6SJacob Faibussowitsch PetscCheck(a->A, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing local matrix"); 116728b400f6SJacob Faibussowitsch PetscCheck(a->A->ops->getcolumnvector, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing get column operation"); 11689566063dSJacob Faibussowitsch PetscCall((*a->A->ops->getcolumnvector)(a->A, v, col)); 11693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 117049a6ff4bSBarry Smith } 117149a6ff4bSBarry Smith 1172857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat, PetscInt, PetscReal *); 117352c5f739Sprj- 117466976f2fSJacob Faibussowitsch static PetscErrorCode MatGetColumnReductions_MPIDense(Mat A, PetscInt type, PetscReal *reductions) 1175d71ae5a4SJacob Faibussowitsch { 1176a873a8cdSSam Reynolds PetscInt i, m, n; 11770716a85fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 11780716a85fSBarry Smith 11790716a85fSBarry Smith PetscFunctionBegin; 11809566063dSJacob Faibussowitsch PetscCall(MatGetSize(A, &m, &n)); 1181857cbf51SRichard Tran Mills if (type == REDUCTION_MEAN_REALPART) { 1182e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_REALPART, reductions)); 1183857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_IMAGINARYPART) { 1184e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_IMAGINARYPART, reductions)); 1185a873a8cdSSam Reynolds } else { 1186e91c04dfSPierre Jolivet PetscCall(MatGetColumnReductions_SeqDense(a->A, type, reductions)); 1187a873a8cdSSam Reynolds } 1188857cbf51SRichard Tran Mills if (type == NORM_2) { 1189e91c04dfSPierre Jolivet for (i = 0; i < n; i++) reductions[i] *= reductions[i]; 11900716a85fSBarry Smith } 1191857cbf51SRichard Tran Mills if (type == NORM_INFINITY) { 1192e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, reductions, n, MPIU_REAL, MPIU_MAX, A->hdr.comm)); 11930716a85fSBarry Smith } else { 1194e91c04dfSPierre Jolivet PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, reductions, n, MPIU_REAL, MPIU_SUM, A->hdr.comm)); 11950716a85fSBarry Smith } 1196857cbf51SRichard Tran Mills if (type == NORM_2) { 1197a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] = PetscSqrtReal(reductions[i]); 1198857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) { 1199a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] /= m; 12000716a85fSBarry Smith } 12013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12020716a85fSBarry Smith } 12030716a85fSBarry Smith 1204d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetRandom_MPIDense(Mat x, PetscRandom rctx) 1205d71ae5a4SJacob Faibussowitsch { 120673a71a0fSBarry Smith Mat_MPIDense *d = (Mat_MPIDense *)x->data; 120773a71a0fSBarry Smith 120873a71a0fSBarry Smith PetscFunctionBegin; 12099566063dSJacob Faibussowitsch PetscCall(MatSetRandom(d->A, rctx)); 12103faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 12113faff063SStefano Zampini x->offloadmask = d->A->offloadmask; 12123faff063SStefano Zampini #endif 12133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 121473a71a0fSBarry Smith } 121573a71a0fSBarry Smith 1216d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A, PetscBool *missing, PetscInt *d) 1217d71ae5a4SJacob Faibussowitsch { 12183b49f96aSBarry Smith PetscFunctionBegin; 12193b49f96aSBarry Smith *missing = PETSC_FALSE; 12203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 12213b49f96aSBarry Smith } 12223b49f96aSBarry Smith 12234222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1224cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12256718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1226a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 12276718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat, Mat, PetscBool *); 12286718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat, PetscViewer); 12295d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat); 1230cc48ffa7SToby Isaac 123109dc0095SBarry Smith static struct _MatOps MatOps_Values = {MatSetValues_MPIDense, 123209dc0095SBarry Smith MatGetRow_MPIDense, 123309dc0095SBarry Smith MatRestoreRow_MPIDense, 123409dc0095SBarry Smith MatMult_MPIDense, 123597304618SKris Buschelman /* 4*/ MatMultAdd_MPIDense, 12367c922b88SBarry Smith MatMultTranspose_MPIDense, 12377c922b88SBarry Smith MatMultTransposeAdd_MPIDense, 1238f4259b30SLisandro Dalcin NULL, 1239f4259b30SLisandro Dalcin NULL, 1240f4259b30SLisandro Dalcin NULL, 1241f4259b30SLisandro Dalcin /* 10*/ NULL, 1242f4259b30SLisandro Dalcin NULL, 1243f4259b30SLisandro Dalcin NULL, 1244f4259b30SLisandro Dalcin NULL, 124509dc0095SBarry Smith MatTranspose_MPIDense, 124697304618SKris Buschelman /* 15*/ MatGetInfo_MPIDense, 12476e4ee0c6SHong Zhang MatEqual_MPIDense, 124809dc0095SBarry Smith MatGetDiagonal_MPIDense, 12495b2fa520SLois Curfman McInnes MatDiagonalScale_MPIDense, 125009dc0095SBarry Smith MatNorm_MPIDense, 125197304618SKris Buschelman /* 20*/ MatAssemblyBegin_MPIDense, 125209dc0095SBarry Smith MatAssemblyEnd_MPIDense, 125309dc0095SBarry Smith MatSetOption_MPIDense, 125409dc0095SBarry Smith MatZeroEntries_MPIDense, 1255d519adbfSMatthew Knepley /* 24*/ MatZeroRows_MPIDense, 1256f4259b30SLisandro Dalcin NULL, 1257f4259b30SLisandro Dalcin NULL, 1258f4259b30SLisandro Dalcin NULL, 1259f4259b30SLisandro Dalcin NULL, 12604994cf47SJed Brown /* 29*/ MatSetUp_MPIDense, 1261f4259b30SLisandro Dalcin NULL, 1262f4259b30SLisandro Dalcin NULL, 1263c56a70eeSBarry Smith MatGetDiagonalBlock_MPIDense, 1264f4259b30SLisandro Dalcin NULL, 1265d519adbfSMatthew Knepley /* 34*/ MatDuplicate_MPIDense, 1266f4259b30SLisandro Dalcin NULL, 1267f4259b30SLisandro Dalcin NULL, 1268f4259b30SLisandro Dalcin NULL, 1269f4259b30SLisandro Dalcin NULL, 1270d519adbfSMatthew Knepley /* 39*/ MatAXPY_MPIDense, 12717dae84e0SHong Zhang MatCreateSubMatrices_MPIDense, 1272f4259b30SLisandro Dalcin NULL, 127309dc0095SBarry Smith MatGetValues_MPIDense, 1274a76f77c3SStefano Zampini MatCopy_MPIDense, 1275f4259b30SLisandro Dalcin /* 44*/ NULL, 127609dc0095SBarry Smith MatScale_MPIDense, 12772f605a99SJose E. Roman MatShift_MPIDense, 1278f4259b30SLisandro Dalcin NULL, 1279f4259b30SLisandro Dalcin NULL, 128073a71a0fSBarry Smith /* 49*/ MatSetRandom_MPIDense, 1281f4259b30SLisandro Dalcin NULL, 1282f4259b30SLisandro Dalcin NULL, 1283f4259b30SLisandro Dalcin NULL, 1284f4259b30SLisandro Dalcin NULL, 1285f4259b30SLisandro Dalcin /* 54*/ NULL, 1286f4259b30SLisandro Dalcin NULL, 1287f4259b30SLisandro Dalcin NULL, 1288f4259b30SLisandro Dalcin NULL, 1289f4259b30SLisandro Dalcin NULL, 12907dae84e0SHong Zhang /* 59*/ MatCreateSubMatrix_MPIDense, 1291b9b97703SBarry Smith MatDestroy_MPIDense, 1292b9b97703SBarry Smith MatView_MPIDense, 1293f4259b30SLisandro Dalcin NULL, 1294f4259b30SLisandro Dalcin NULL, 1295f4259b30SLisandro Dalcin /* 64*/ NULL, 1296f4259b30SLisandro Dalcin NULL, 1297f4259b30SLisandro Dalcin NULL, 1298f4259b30SLisandro Dalcin NULL, 1299f4259b30SLisandro Dalcin NULL, 1300f4259b30SLisandro Dalcin /* 69*/ NULL, 1301f4259b30SLisandro Dalcin NULL, 1302f4259b30SLisandro Dalcin NULL, 1303f4259b30SLisandro Dalcin NULL, 1304f4259b30SLisandro Dalcin NULL, 1305f4259b30SLisandro Dalcin /* 74*/ NULL, 1306f4259b30SLisandro Dalcin NULL, 1307f4259b30SLisandro Dalcin NULL, 1308f4259b30SLisandro Dalcin NULL, 1309f4259b30SLisandro Dalcin NULL, 1310f4259b30SLisandro Dalcin /* 79*/ NULL, 1311f4259b30SLisandro Dalcin NULL, 1312f4259b30SLisandro Dalcin NULL, 1313f4259b30SLisandro Dalcin NULL, 13145bba2384SShri Abhyankar /* 83*/ MatLoad_MPIDense, 1315f4259b30SLisandro Dalcin NULL, 1316f4259b30SLisandro Dalcin NULL, 1317f4259b30SLisandro Dalcin NULL, 1318f4259b30SLisandro Dalcin NULL, 1319f4259b30SLisandro Dalcin NULL, 1320f4259b30SLisandro Dalcin /* 89*/ NULL, 1321f4259b30SLisandro Dalcin NULL, 1322f4259b30SLisandro Dalcin NULL, 1323f4259b30SLisandro Dalcin NULL, 1324f4259b30SLisandro Dalcin NULL, 1325f4259b30SLisandro Dalcin /* 94*/ NULL, 1326f4259b30SLisandro Dalcin NULL, 13276718818eSStefano Zampini MatMatTransposeMultSymbolic_MPIDense_MPIDense, 1328cc48ffa7SToby Isaac MatMatTransposeMultNumeric_MPIDense_MPIDense, 1329f4259b30SLisandro Dalcin NULL, 13304222ddf1SHong Zhang /* 99*/ MatProductSetFromOptions_MPIDense, 1331f4259b30SLisandro Dalcin NULL, 1332f4259b30SLisandro Dalcin NULL, 1333ba337c44SJed Brown MatConjugate_MPIDense, 1334f4259b30SLisandro Dalcin NULL, 1335f4259b30SLisandro Dalcin /*104*/ NULL, 1336ba337c44SJed Brown MatRealPart_MPIDense, 1337ba337c44SJed Brown MatImaginaryPart_MPIDense, 1338f4259b30SLisandro Dalcin NULL, 1339f4259b30SLisandro Dalcin NULL, 1340f4259b30SLisandro Dalcin /*109*/ NULL, 1341f4259b30SLisandro Dalcin NULL, 1342f4259b30SLisandro Dalcin NULL, 134349a6ff4bSBarry Smith MatGetColumnVector_MPIDense, 13443b49f96aSBarry Smith MatMissingDiagonal_MPIDense, 1345f4259b30SLisandro Dalcin /*114*/ NULL, 1346f4259b30SLisandro Dalcin NULL, 1347f4259b30SLisandro Dalcin NULL, 1348f4259b30SLisandro Dalcin NULL, 1349f4259b30SLisandro Dalcin NULL, 1350f4259b30SLisandro Dalcin /*119*/ NULL, 1351f4259b30SLisandro Dalcin NULL, 1352459e8d23SBlanca Mellado Pinto MatMultHermitianTranspose_MPIDense, 1353459e8d23SBlanca Mellado Pinto MatMultHermitianTransposeAdd_MPIDense, 1354f4259b30SLisandro Dalcin NULL, 1355f4259b30SLisandro Dalcin /*124*/ NULL, 1356a873a8cdSSam Reynolds MatGetColumnReductions_MPIDense, 1357f4259b30SLisandro Dalcin NULL, 1358f4259b30SLisandro Dalcin NULL, 1359f4259b30SLisandro Dalcin NULL, 1360f4259b30SLisandro Dalcin /*129*/ NULL, 1361f4259b30SLisandro Dalcin NULL, 13626718818eSStefano Zampini MatTransposeMatMultSymbolic_MPIDense_MPIDense, 1363cb20be35SHong Zhang MatTransposeMatMultNumeric_MPIDense_MPIDense, 1364f4259b30SLisandro Dalcin NULL, 1365f4259b30SLisandro Dalcin /*134*/ NULL, 1366f4259b30SLisandro Dalcin NULL, 1367f4259b30SLisandro Dalcin NULL, 1368f4259b30SLisandro Dalcin NULL, 1369f4259b30SLisandro Dalcin NULL, 1370f4259b30SLisandro Dalcin /*139*/ NULL, 1371f4259b30SLisandro Dalcin NULL, 1372f4259b30SLisandro Dalcin NULL, 1373f4259b30SLisandro Dalcin NULL, 1374f4259b30SLisandro Dalcin NULL, 13754222ddf1SHong Zhang MatCreateMPIMatConcatenateSeqMat_MPIDense, 1376f4259b30SLisandro Dalcin /*145*/ NULL, 1377f4259b30SLisandro Dalcin NULL, 137899a7f59eSMark Adams NULL, 137999a7f59eSMark Adams NULL, 13807fb60732SBarry Smith NULL, 1381dec0b466SHong Zhang /*150*/ NULL, 1382eede4a3fSMark Adams NULL, 13834cc2b5b5SPierre Jolivet NULL, 138442ce410bSJunchao Zhang NULL, 138542ce410bSJunchao Zhang NULL, 1386fe1fc275SAlexander /*155*/ NULL, 1387dec0b466SHong Zhang NULL}; 13888965ea79SLois Curfman McInnes 138966976f2fSJacob Faibussowitsch static PetscErrorCode MatMPIDenseSetPreallocation_MPIDense(Mat mat, PetscScalar *data) 1390d71ae5a4SJacob Faibussowitsch { 1391637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 139247d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 1393a23d5eceSKris Buschelman 1394a23d5eceSKris Buschelman PetscFunctionBegin; 139528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 13969566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->rmap)); 13979566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->cmap)); 1398637a0070SStefano Zampini if (!a->A) { 13999566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 14009566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, mat->rmap->n, mat->cmap->N, mat->rmap->n, mat->cmap->N)); 1401637a0070SStefano Zampini } 140247d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 140347d993e7Ssuyashtn PetscBool iscuda; 14049566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSECUDA, &iscuda)); 140547d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 140647d993e7Ssuyashtn #endif 140747d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 140847d993e7Ssuyashtn PetscBool iship; 140947d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSEHIP, &iship)); 141047d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 141147d993e7Ssuyashtn #endif 141247d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 14139566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(a->A, data)); 141447d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 14153faff063SStefano Zampini mat->offloadmask = a->A->offloadmask; 14163faff063SStefano Zampini #endif 1417637a0070SStefano Zampini mat->preallocated = PETSC_TRUE; 14186f08ad05SPierre Jolivet mat->assembled = PETSC_TRUE; 14193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1420a23d5eceSKris Buschelman } 1421a23d5eceSKris Buschelman 1422d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1423d71ae5a4SJacob Faibussowitsch { 14244e29119aSPierre Jolivet Mat B, C; 14254e29119aSPierre Jolivet 14264e29119aSPierre Jolivet PetscFunctionBegin; 14279566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMat(A, MAT_INITIAL_MATRIX, &C)); 14289566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqDense(C, MATSEQDENSE, MAT_INITIAL_MATRIX, &B)); 14299566063dSJacob Faibussowitsch PetscCall(MatDestroy(&C)); 14304e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14314e29119aSPierre Jolivet C = *newmat; 14324e29119aSPierre Jolivet } else C = NULL; 14339566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14349566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 14354e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 14369566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 14374e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 14383ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14394e29119aSPierre Jolivet } 14404e29119aSPierre Jolivet 144166976f2fSJacob Faibussowitsch static PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1442d71ae5a4SJacob Faibussowitsch { 14434e29119aSPierre Jolivet Mat B, C; 14444e29119aSPierre Jolivet 14454e29119aSPierre Jolivet PetscFunctionBegin; 14469566063dSJacob Faibussowitsch PetscCall(MatDenseGetLocalMatrix(A, &C)); 14479566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqDense_SeqAIJ(C, MATSEQAIJ, MAT_INITIAL_MATRIX, &B)); 14484e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 14494e29119aSPierre Jolivet C = *newmat; 14504e29119aSPierre Jolivet } else C = NULL; 14519566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 14529566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 14534e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 14549566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 14554e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 14563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14574e29119aSPierre Jolivet } 14584e29119aSPierre Jolivet 145965b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 1460d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1461d71ae5a4SJacob Faibussowitsch { 1462f709e8d7SPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14638ea901baSHong Zhang Mat mat_elemental; 146432d7a744SHong Zhang PetscScalar *v; 1465f709e8d7SPierre Jolivet PetscInt m = A->rmap->n, N = A->cmap->N, rstart = A->rmap->rstart, i, *rows, *cols, lda; 14668ea901baSHong Zhang 14678baccfbdSHong Zhang PetscFunctionBegin; 1468378336b6SHong Zhang if (reuse == MAT_REUSE_MATRIX) { 1469378336b6SHong Zhang mat_elemental = *newmat; 14709566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(*newmat)); 1471378336b6SHong Zhang } else { 14729566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental)); 14739566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat_elemental, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 14749566063dSJacob Faibussowitsch PetscCall(MatSetType(mat_elemental, MATELEMENTAL)); 14759566063dSJacob Faibussowitsch PetscCall(MatSetUp(mat_elemental)); 14769566063dSJacob Faibussowitsch PetscCall(MatSetOption(mat_elemental, MAT_ROW_ORIENTED, PETSC_FALSE)); 1477378336b6SHong Zhang } 1478378336b6SHong Zhang 14799566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &rows, N, &cols)); 148032d7a744SHong Zhang for (i = 0; i < N; i++) cols[i] = i; 148132d7a744SHong Zhang for (i = 0; i < m; i++) rows[i] = rstart + i; 14828ea901baSHong Zhang 1483637a0070SStefano Zampini /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */ 14849566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(A, &v)); 1485f709e8d7SPierre Jolivet PetscCall(MatDenseGetLDA(a->A, &lda)); 1486f709e8d7SPierre Jolivet if (lda == m) PetscCall(MatSetValues(mat_elemental, m, rows, N, cols, v, ADD_VALUES)); 1487f709e8d7SPierre Jolivet else { 1488f709e8d7SPierre Jolivet for (i = 0; i < N; i++) PetscCall(MatSetValues(mat_elemental, m, rows, 1, &i, v + lda * i, ADD_VALUES)); 1489f709e8d7SPierre Jolivet } 14909566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY)); 14919566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY)); 14929566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(A, &v)); 14939566063dSJacob Faibussowitsch PetscCall(PetscFree2(rows, cols)); 14948ea901baSHong Zhang 1495511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 14969566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &mat_elemental)); 14978ea901baSHong Zhang } else { 14988ea901baSHong Zhang *newmat = mat_elemental; 14998ea901baSHong Zhang } 15003ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15018baccfbdSHong Zhang } 150265b80a83SHong Zhang #endif 15038baccfbdSHong Zhang 1504d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A, PetscInt col, PetscScalar **vals) 1505d71ae5a4SJacob Faibussowitsch { 150686aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 150786aefd0dSHong Zhang 150886aefd0dSHong Zhang PetscFunctionBegin; 15099566063dSJacob Faibussowitsch PetscCall(MatDenseGetColumn(mat->A, col, vals)); 15103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 151186aefd0dSHong Zhang } 151286aefd0dSHong Zhang 1513d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A, PetscScalar **vals) 1514d71ae5a4SJacob Faibussowitsch { 151586aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 151686aefd0dSHong Zhang 151786aefd0dSHong Zhang PetscFunctionBegin; 15189566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreColumn(mat->A, vals)); 15193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 152086aefd0dSHong Zhang } 152186aefd0dSHong Zhang 1522d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm, Mat inmat, PetscInt n, MatReuse scall, Mat *outmat) 1523d71ae5a4SJacob Faibussowitsch { 152494e2cb23SJakub Kruzik Mat_MPIDense *mat; 152594e2cb23SJakub Kruzik PetscInt m, nloc, N; 152694e2cb23SJakub Kruzik 152794e2cb23SJakub Kruzik PetscFunctionBegin; 15289566063dSJacob Faibussowitsch PetscCall(MatGetSize(inmat, &m, &N)); 15299566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(inmat, NULL, &nloc)); 153094e2cb23SJakub Kruzik if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */ 153194e2cb23SJakub Kruzik PetscInt sum; 153294e2cb23SJakub Kruzik 153348a46eb9SPierre Jolivet if (n == PETSC_DECIDE) PetscCall(PetscSplitOwnership(comm, &n, &N)); 153494e2cb23SJakub Kruzik /* Check sum(n) = N */ 1535462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(&n, &sum, 1, MPIU_INT, MPI_SUM, comm)); 153608401ef6SPierre Jolivet PetscCheck(sum == N, PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT, sum, N); 153794e2cb23SJakub Kruzik 15389566063dSJacob Faibussowitsch PetscCall(MatCreateDense(comm, m, n, PETSC_DETERMINE, N, NULL, outmat)); 15399566063dSJacob Faibussowitsch PetscCall(MatSetOption(*outmat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 154094e2cb23SJakub Kruzik } 154194e2cb23SJakub Kruzik 154294e2cb23SJakub Kruzik /* numeric phase */ 154394e2cb23SJakub Kruzik mat = (Mat_MPIDense *)(*outmat)->data; 15449566063dSJacob Faibussowitsch PetscCall(MatCopy(inmat, mat->A, SAME_NONZERO_PATTERN)); 15453ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 154694e2cb23SJakub Kruzik } 154794e2cb23SJakub Kruzik 1548d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1549d71ae5a4SJacob Faibussowitsch { 15506947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15516947451fSStefano Zampini PetscInt lda; 15526947451fSStefano Zampini 15536947451fSStefano Zampini PetscFunctionBegin; 155428b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 155528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1556d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 15576947451fSStefano Zampini a->vecinuse = col + 1; 15589566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 15599566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, (PetscScalar **)&a->ptrinuse)); 15608e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 15616947451fSStefano Zampini *v = a->cvec; 15623ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15636947451fSStefano Zampini } 15646947451fSStefano Zampini 1565d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1566d71ae5a4SJacob Faibussowitsch { 15676947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15686947451fSStefano Zampini 15696947451fSStefano Zampini PetscFunctionBegin; 157028b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 157128b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector"); 15724186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 15736947451fSStefano Zampini a->vecinuse = 0; 15749566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, (PetscScalar **)&a->ptrinuse)); 15759566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1576742765d3SMatthew Knepley if (v) *v = NULL; 15773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15786947451fSStefano Zampini } 15796947451fSStefano Zampini 1580d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1581d71ae5a4SJacob Faibussowitsch { 15826947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15836947451fSStefano Zampini PetscInt lda; 15846947451fSStefano Zampini 15856947451fSStefano Zampini PetscFunctionBegin; 158628b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 158728b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1588d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 15896947451fSStefano Zampini a->vecinuse = col + 1; 15909566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 15919566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &a->ptrinuse)); 15928e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 15939566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(a->cvec)); 15946947451fSStefano Zampini *v = a->cvec; 15953ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15966947451fSStefano Zampini } 15976947451fSStefano Zampini 1598d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1599d71ae5a4SJacob Faibussowitsch { 16006947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16016947451fSStefano Zampini 16026947451fSStefano Zampini PetscFunctionBegin; 16035f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 16045f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 16054186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 16066947451fSStefano Zampini a->vecinuse = 0; 16079566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &a->ptrinuse)); 16089566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(a->cvec)); 16099566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1610742765d3SMatthew Knepley if (v) *v = NULL; 16113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16126947451fSStefano Zampini } 16136947451fSStefano Zampini 1614d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1615d71ae5a4SJacob Faibussowitsch { 16166947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16176947451fSStefano Zampini PetscInt lda; 16186947451fSStefano Zampini 16196947451fSStefano Zampini PetscFunctionBegin; 16205f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 16215f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1622d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 16236947451fSStefano Zampini a->vecinuse = col + 1; 16249566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 16259566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 16268e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 16276947451fSStefano Zampini *v = a->cvec; 16283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16296947451fSStefano Zampini } 16306947451fSStefano Zampini 1631d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1632d71ae5a4SJacob Faibussowitsch { 16336947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 16346947451fSStefano Zampini 16356947451fSStefano Zampini PetscFunctionBegin; 16365f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 16375f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 16384186a4bbSPierre Jolivet VecCheckAssembled(a->cvec); 16396947451fSStefano Zampini a->vecinuse = 0; 16409566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 16419566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1642742765d3SMatthew Knepley if (v) *v = NULL; 16433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16446947451fSStefano Zampini } 16456947451fSStefano Zampini 164666976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A, PetscInt rbegin, PetscInt rend, PetscInt cbegin, PetscInt cend, Mat *v) 1647d71ae5a4SJacob Faibussowitsch { 16485ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1649616b8fbbSStefano Zampini Mat_MPIDense *c; 1650616b8fbbSStefano Zampini MPI_Comm comm; 1651*d016bddeSToby Isaac PetscInt prbegin, prend, pcbegin, pcend; 16525ea7661aSPierre Jolivet 16535ea7661aSPierre Jolivet PetscFunctionBegin; 16549566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 16555f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 16565f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1657*d016bddeSToby Isaac prbegin = PetscMax(0, PetscMin(A->rmap->rend, rbegin) - A->rmap->rstart); 1658*d016bddeSToby Isaac prend = PetscMin(A->rmap->n, PetscMax(0, rend - A->rmap->rstart)); 1659*d016bddeSToby Isaac pcbegin = PetscMax(0, PetscMin(A->cmap->rend, cbegin) - A->cmap->rstart); 1660*d016bddeSToby Isaac pcend = PetscMin(A->cmap->n, PetscMax(0, cend - A->cmap->rstart)); 16615ea7661aSPierre Jolivet if (!a->cmat) { 16629566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &a->cmat)); 16639566063dSJacob Faibussowitsch PetscCall(MatSetType(a->cmat, ((PetscObject)A)->type_name)); 1664a2748737SPierre Jolivet if (rend - rbegin == A->rmap->N) PetscCall(PetscLayoutReference(A->rmap, &a->cmat->rmap)); 1665a2748737SPierre Jolivet else { 1666*d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, prend - prbegin)); 1667a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1668a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1669a2748737SPierre Jolivet } 1670*d016bddeSToby Isaac if (cend - cbegin == A->cmap->N) PetscCall(PetscLayoutReference(A->cmap, &a->cmat->cmap)); 1671*d016bddeSToby Isaac else { 1672*d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->cmap, pcend - pcbegin)); 16739566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 16749566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1675a2748737SPierre Jolivet } 1676616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 1677*d016bddeSToby Isaac c->sub_rbegin = rbegin; 1678*d016bddeSToby Isaac c->sub_rend = rend; 1679*d016bddeSToby Isaac c->sub_cbegin = cbegin; 1680*d016bddeSToby Isaac c->sub_cend = cend; 1681*d016bddeSToby Isaac } 1682*d016bddeSToby Isaac c = (Mat_MPIDense *)a->cmat->data; 1683*d016bddeSToby Isaac if (c->sub_rbegin != rbegin || c->sub_rend != rend) { 1684*d016bddeSToby Isaac PetscCall(PetscLayoutDestroy(&a->cmat->rmap)); 1685*d016bddeSToby Isaac PetscCall(PetscLayoutCreate(comm, &a->cmat->rmap)); 1686*d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, prend - prbegin)); 1687*d016bddeSToby Isaac PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1688*d016bddeSToby Isaac PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1689*d016bddeSToby Isaac c->sub_rbegin = rbegin; 1690*d016bddeSToby Isaac c->sub_rend = rend; 1691*d016bddeSToby Isaac } 1692*d016bddeSToby Isaac if (c->sub_cbegin != cbegin || c->sub_cend != cend) { 1693*d016bddeSToby Isaac // special optimization: check if all columns are owned by rank 0, in which case no communication is necessary 1694*d016bddeSToby Isaac if ((cend - cbegin != a->cmat->cmap->N) || (A->cmap->range[1] != A->cmap->N)) { 1695*d016bddeSToby Isaac PetscCall(PetscLayoutDestroy(&a->cmat->cmap)); 1696*d016bddeSToby Isaac PetscCall(PetscLayoutCreate(comm, &a->cmat->cmap)); 1697*d016bddeSToby Isaac PetscCall(PetscLayoutSetLocalSize(a->cmat->cmap, pcend - pcbegin)); 1698*d016bddeSToby Isaac PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 1699*d016bddeSToby Isaac PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1700*d016bddeSToby Isaac PetscCall(VecDestroy(&c->lvec)); 1701*d016bddeSToby Isaac PetscCall(PetscSFDestroy(&c->Mvctx)); 1702*d016bddeSToby Isaac } 1703*d016bddeSToby Isaac c->sub_cbegin = cbegin; 1704*d016bddeSToby Isaac c->sub_cend = cend; 1705*d016bddeSToby Isaac } 17065f80ce2aSJacob Faibussowitsch PetscCheck(!c->A, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1707*d016bddeSToby Isaac PetscCall(MatDenseGetSubMatrix(a->A, prbegin, prend, cbegin, cend, &c->A)); 17083faff063SStefano Zampini 1709616b8fbbSStefano Zampini a->cmat->preallocated = PETSC_TRUE; 1710616b8fbbSStefano Zampini a->cmat->assembled = PETSC_TRUE; 17113faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 17123faff063SStefano Zampini a->cmat->offloadmask = c->A->offloadmask; 17133faff063SStefano Zampini #endif 17145ea7661aSPierre Jolivet a->matinuse = cbegin + 1; 17155ea7661aSPierre Jolivet *v = a->cmat; 17163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 17175ea7661aSPierre Jolivet } 17185ea7661aSPierre Jolivet 171966976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A, Mat *v) 1720d71ae5a4SJacob Faibussowitsch { 17215ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1722616b8fbbSStefano Zampini Mat_MPIDense *c; 17235ea7661aSPierre Jolivet 17245ea7661aSPierre Jolivet PetscFunctionBegin; 17255f80ce2aSJacob Faibussowitsch PetscCheck(a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetSubMatrix() first"); 17265f80ce2aSJacob Faibussowitsch PetscCheck(a->cmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal matrix"); 17275f80ce2aSJacob Faibussowitsch PetscCheck(*v == a->cmat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Not the matrix obtained from MatDenseGetSubMatrix()"); 17285ea7661aSPierre Jolivet a->matinuse = 0; 1729616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 17309566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreSubMatrix(a->A, &c->A)); 1731742765d3SMatthew Knepley if (v) *v = NULL; 17323faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 17333faff063SStefano Zampini A->offloadmask = a->A->offloadmask; 17343faff063SStefano Zampini #endif 17353ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 17365ea7661aSPierre Jolivet } 17375ea7661aSPierre Jolivet 1738002bc6daSRichard Tran Mills /*MC 1739002bc6daSRichard Tran Mills MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices. 1740002bc6daSRichard Tran Mills 17412ef1f0ffSBarry Smith Options Database Key: 174211a5261eSBarry Smith . -mat_type mpidense - sets the matrix type to `MATMPIDENSE` during a call to `MatSetFromOptions()` 1743002bc6daSRichard Tran Mills 1744002bc6daSRichard Tran Mills Level: beginner 1745002bc6daSRichard Tran Mills 17461cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreateDense()`, `MATSEQDENSE`, `MATDENSE` 1747002bc6daSRichard Tran Mills M*/ 17484742e46bSJacob Faibussowitsch PetscErrorCode MatCreate_MPIDense(Mat mat) 1749d71ae5a4SJacob Faibussowitsch { 1750273d9f13SBarry Smith Mat_MPIDense *a; 1751273d9f13SBarry Smith 1752273d9f13SBarry Smith PetscFunctionBegin; 17534dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&a)); 1754b0a32e0cSBarry Smith mat->data = (void *)a; 1755aea10558SJacob Faibussowitsch mat->ops[0] = MatOps_Values; 1756273d9f13SBarry Smith 1757273d9f13SBarry Smith mat->insertmode = NOT_SET_VALUES; 1758273d9f13SBarry Smith 1759273d9f13SBarry Smith /* build cache for off array entries formed */ 1760273d9f13SBarry Smith a->donotstash = PETSC_FALSE; 17612205254eSKarl Rupp 17629566063dSJacob Faibussowitsch PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat), 1, &mat->stash)); 1763273d9f13SBarry Smith 1764273d9f13SBarry Smith /* stuff used for matrix vector multiply */ 1765f4259b30SLisandro Dalcin a->lvec = NULL; 1766f4259b30SLisandro Dalcin a->Mvctx = NULL; 1767273d9f13SBarry Smith a->roworiented = PETSC_TRUE; 1768273d9f13SBarry Smith 17699566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", MatDenseGetLDA_MPIDense)); 17709566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", MatDenseSetLDA_MPIDense)); 17719566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", MatDenseGetArray_MPIDense)); 17729566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", MatDenseRestoreArray_MPIDense)); 17739566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", MatDenseGetArrayRead_MPIDense)); 17749566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", MatDenseRestoreArrayRead_MPIDense)); 17759566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", MatDenseGetArrayWrite_MPIDense)); 17769566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", MatDenseRestoreArrayWrite_MPIDense)); 17779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", MatDensePlaceArray_MPIDense)); 17789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", MatDenseResetArray_MPIDense)); 17799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", MatDenseReplaceArray_MPIDense)); 17809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense)); 17819566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense)); 17829566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense)); 17839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense)); 17849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense)); 17859566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense)); 17869566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", MatDenseGetSubMatrix_MPIDense)); 17879566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", MatDenseRestoreSubMatrix_MPIDense)); 17889566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", MatConvert_MPIAIJ_MPIDense)); 17899566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", MatConvert_MPIDense_MPIAIJ)); 17908baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 17919566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", MatConvert_MPIDense_Elemental)); 17928baccfbdSHong Zhang #endif 1793d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 17949566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", MatConvert_Dense_ScaLAPACK)); 1795d24d4204SJose E. Roman #endif 1796637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 17979566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", MatConvert_MPIDense_MPIDenseCUDA)); 1798637a0070SStefano Zampini #endif 17999566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", MatMPIDenseSetPreallocation_MPIDense)); 18009566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 18019566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 18026718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 18039566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 18049566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 18056718818eSStefano Zampini #endif 180647d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 180747d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", MatConvert_MPIDense_MPIDenseHIP)); 180847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 180947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 181047d993e7Ssuyashtn #endif 18119566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", MatDenseGetColumn_MPIDense)); 18129566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", MatDenseRestoreColumn_MPIDense)); 1813*d016bddeSToby Isaac PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultColumnRange_C", MatMultColumnRange_MPIDense)); 18140be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultAddColumnRange_C", MatMultAddColumnRange_MPIDense)); 18150be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeColumnRange_C", MatMultHermitianTransposeColumnRange_MPIDense)); 18160be0d8bdSHansol Suh PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMultHermitianTransposeAddColumnRange_C", MatMultHermitianTransposeAddColumnRange_MPIDense)); 18179566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATMPIDENSE)); 18183ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1819273d9f13SBarry Smith } 1820273d9f13SBarry Smith 1821209238afSKris Buschelman /*MC 1822002d173eSKris Buschelman MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices. 1823209238afSKris Buschelman 182411a5261eSBarry Smith This matrix type is identical to `MATSEQDENSE` when constructed with a single process communicator, 182511a5261eSBarry Smith and `MATMPIDENSE` otherwise. 1826209238afSKris Buschelman 18272ef1f0ffSBarry Smith Options Database Key: 182811a5261eSBarry Smith . -mat_type dense - sets the matrix type to `MATDENSE` during a call to `MatSetFromOptions()` 1829209238afSKris Buschelman 1830209238afSKris Buschelman Level: beginner 1831209238afSKris Buschelman 18321cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATSEQDENSE`, `MATMPIDENSE`, `MATDENSECUDA`, `MATDENSEHIP` 18336947451fSStefano Zampini M*/ 18346947451fSStefano Zampini 18355d83a8b1SBarry Smith /*@ 1836273d9f13SBarry Smith MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries 1837273d9f13SBarry Smith 18388f490ea3SStefano Zampini Collective 1839273d9f13SBarry Smith 1840273d9f13SBarry Smith Input Parameters: 1841fe59aa6dSJacob Faibussowitsch + B - the matrix 18422ef1f0ffSBarry Smith - data - optional location of matrix data. Set to `NULL` for PETSc 1843273d9f13SBarry Smith to control all matrix memory allocation. 1844273d9f13SBarry Smith 18452ef1f0ffSBarry Smith Level: intermediate 18462ef1f0ffSBarry Smith 1847273d9f13SBarry Smith Notes: 18482ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 1849273d9f13SBarry Smith storage by columns. 1850273d9f13SBarry Smith 1851273d9f13SBarry Smith The data input variable is intended primarily for Fortran programmers 1852273d9f13SBarry Smith who wish to allocate their own matrix memory space. Most users should 18532ef1f0ffSBarry Smith set `data` to `NULL`. 1854273d9f13SBarry Smith 18551cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMPIDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 1856273d9f13SBarry Smith @*/ 1857d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMPIDenseSetPreallocation(Mat B, PetscScalar *data) 1858d71ae5a4SJacob Faibussowitsch { 1859273d9f13SBarry Smith PetscFunctionBegin; 1860d5ea218eSStefano Zampini PetscValidHeaderSpecific(B, MAT_CLASSID, 1); 1861cac4c232SBarry Smith PetscTryMethod(B, "MatMPIDenseSetPreallocation_C", (Mat, PetscScalar *), (B, data)); 18623ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1863273d9f13SBarry Smith } 1864273d9f13SBarry Smith 1865d3042a70SBarry Smith /*@ 186611a5261eSBarry Smith MatDensePlaceArray - Allows one to replace the array in a `MATDENSE` matrix with an 1867d3042a70SBarry Smith array provided by the user. This is useful to avoid copying an array 1868d3042a70SBarry Smith into a matrix 1869d3042a70SBarry Smith 1870d3042a70SBarry Smith Not Collective 1871d3042a70SBarry Smith 1872d3042a70SBarry Smith Input Parameters: 1873d3042a70SBarry Smith + mat - the matrix 1874d3042a70SBarry Smith - array - the array in column major order 1875d3042a70SBarry Smith 18762ef1f0ffSBarry Smith Level: developer 18772ef1f0ffSBarry Smith 187811a5261eSBarry Smith Note: 18794d5500e8SJunchao Zhang Adding `const` to `array` was an oversight, see notes in `VecPlaceArray()`. 18804d5500e8SJunchao Zhang 188111a5261eSBarry Smith You can return to the original array with a call to `MatDenseResetArray()`. The user is responsible for freeing this array; it will not be 1882d3042a70SBarry Smith freed when the matrix is destroyed. 1883d3042a70SBarry Smith 18841cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`, 188511a5261eSBarry Smith `MatDenseReplaceArray()` 1886d3042a70SBarry Smith @*/ 1887d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDensePlaceArray(Mat mat, const PetscScalar *array) 1888d71ae5a4SJacob Faibussowitsch { 1889d3042a70SBarry Smith PetscFunctionBegin; 1890d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1891cac4c232SBarry Smith PetscUseMethod(mat, "MatDensePlaceArray_C", (Mat, const PetscScalar *), (mat, array)); 18929566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 189347d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1894637a0070SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1895637a0070SStefano Zampini #endif 18963ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1897d3042a70SBarry Smith } 1898d3042a70SBarry Smith 1899d3042a70SBarry Smith /*@ 190011a5261eSBarry Smith MatDenseResetArray - Resets the matrix array to that it previously had before the call to `MatDensePlaceArray()` 1901d3042a70SBarry Smith 1902d3042a70SBarry Smith Not Collective 1903d3042a70SBarry Smith 19042fe279fdSBarry Smith Input Parameter: 1905d3042a70SBarry Smith . mat - the matrix 1906d3042a70SBarry Smith 19072ef1f0ffSBarry Smith Level: developer 19082ef1f0ffSBarry Smith 190911a5261eSBarry Smith Note: 191011a5261eSBarry Smith You can only call this after a call to `MatDensePlaceArray()` 1911d3042a70SBarry Smith 19121cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()` 1913d3042a70SBarry Smith @*/ 1914d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseResetArray(Mat mat) 1915d71ae5a4SJacob Faibussowitsch { 1916d3042a70SBarry Smith PetscFunctionBegin; 1917d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1918cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseResetArray_C", (Mat), (mat)); 19199566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 19203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1921d3042a70SBarry Smith } 1922d3042a70SBarry Smith 1923d5ea218eSStefano Zampini /*@ 1924d5ea218eSStefano Zampini MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an 1925d5ea218eSStefano Zampini array provided by the user. This is useful to avoid copying an array 1926d5ea218eSStefano Zampini into a matrix 1927d5ea218eSStefano Zampini 1928d5ea218eSStefano Zampini Not Collective 1929d5ea218eSStefano Zampini 1930d5ea218eSStefano Zampini Input Parameters: 1931d5ea218eSStefano Zampini + mat - the matrix 1932d5ea218eSStefano Zampini - array - the array in column major order 1933d5ea218eSStefano Zampini 19342ef1f0ffSBarry Smith Level: developer 19352ef1f0ffSBarry Smith 193611a5261eSBarry Smith Note: 19374d5500e8SJunchao Zhang Adding `const` to `array` was an oversight, see notes in `VecPlaceArray()`. 19384d5500e8SJunchao Zhang 193911a5261eSBarry Smith The memory passed in MUST be obtained with `PetscMalloc()` and CANNOT be 1940d5ea218eSStefano Zampini freed by the user. It will be freed when the matrix is destroyed. 1941d5ea218eSStefano Zampini 19421cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatDensePlaceArray()`, `MatDenseGetArray()`, `VecReplaceArray()` 1943d5ea218eSStefano Zampini @*/ 1944d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseReplaceArray(Mat mat, const PetscScalar *array) 1945d71ae5a4SJacob Faibussowitsch { 1946d5ea218eSStefano Zampini PetscFunctionBegin; 1947d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1948cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseReplaceArray_C", (Mat, const PetscScalar *), (mat, array)); 19499566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 195047d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1951d5ea218eSStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1952d5ea218eSStefano Zampini #endif 19533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1954d5ea218eSStefano Zampini } 1955d5ea218eSStefano Zampini 19565d83a8b1SBarry Smith /*@ 195711a5261eSBarry Smith MatCreateDense - Creates a matrix in `MATDENSE` format. 19588965ea79SLois Curfman McInnes 1959d083f849SBarry Smith Collective 1960db81eaa0SLois Curfman McInnes 19618965ea79SLois Curfman McInnes Input Parameters: 1962db81eaa0SLois Curfman McInnes + comm - MPI communicator 19632ef1f0ffSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if `M` is given) 19642ef1f0ffSBarry Smith . n - number of local columns (or `PETSC_DECIDE` to have calculated if `N` is given) 19652ef1f0ffSBarry Smith . M - number of global rows (or `PETSC_DECIDE` to have calculated if `m` is given) 19662ef1f0ffSBarry Smith . N - number of global columns (or `PETSC_DECIDE` to have calculated if `n` is given) 19672ef1f0ffSBarry Smith - data - optional location of matrix data. Set data to `NULL` (`PETSC_NULL_SCALAR` for Fortran users) for PETSc 1968dfc5480cSLois Curfman McInnes to control all matrix memory allocation. 19698965ea79SLois Curfman McInnes 19708965ea79SLois Curfman McInnes Output Parameter: 1971477f1c0bSLois Curfman McInnes . A - the matrix 19728965ea79SLois Curfman McInnes 19732ef1f0ffSBarry Smith Level: intermediate 19742ef1f0ffSBarry Smith 1975b259b22eSLois Curfman McInnes Notes: 19762ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 197739ddd567SLois Curfman McInnes storage by columns. 197811a5261eSBarry Smith 197911a5261eSBarry Smith Although local portions of the matrix are stored in column-major 1980002bc6daSRichard Tran Mills order, the matrix is partitioned across MPI ranks by row. 19818965ea79SLois Curfman McInnes 198218f449edSLois Curfman McInnes The data input variable is intended primarily for Fortran programmers 198318f449edSLois Curfman McInnes who wish to allocate their own matrix memory space. Most users should 19842ef1f0ffSBarry Smith set `data` to `NULL` (`PETSC_NULL_SCALAR` for Fortran users). 198518f449edSLois Curfman McInnes 19868965ea79SLois Curfman McInnes The user MUST specify either the local or global matrix dimensions 19878965ea79SLois Curfman McInnes (possibly both). 19888965ea79SLois Curfman McInnes 19891cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 19908965ea79SLois Curfman McInnes @*/ 1991ce78bad3SBarry Smith PetscErrorCode MatCreateDense(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar data[], Mat *A) 1992d71ae5a4SJacob Faibussowitsch { 19933a40ed3dSBarry Smith PetscFunctionBegin; 19949566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 19959566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, M, N)); 19966f08ad05SPierre Jolivet PetscCall(MatSetType(*A, MATDENSE)); 19979566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(*A, data)); 19986f08ad05SPierre Jolivet PetscCall(MatMPIDenseSetPreallocation(*A, data)); 19993ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20008965ea79SLois Curfman McInnes } 20018965ea79SLois Curfman McInnes 2002d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDuplicate_MPIDense(Mat A, MatDuplicateOption cpvalues, Mat *newmat) 2003d71ae5a4SJacob Faibussowitsch { 20048965ea79SLois Curfman McInnes Mat mat; 20053501a2bdSLois Curfman McInnes Mat_MPIDense *a, *oldmat = (Mat_MPIDense *)A->data; 20068965ea79SLois Curfman McInnes 20073a40ed3dSBarry Smith PetscFunctionBegin; 2008f4259b30SLisandro Dalcin *newmat = NULL; 20099566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat)); 20109566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 20119566063dSJacob Faibussowitsch PetscCall(MatSetType(mat, ((PetscObject)A)->type_name)); 2012834f8fabSBarry Smith a = (Mat_MPIDense *)mat->data; 20135aa7edbeSHong Zhang 2014d5f3da31SBarry Smith mat->factortype = A->factortype; 2015c456f294SBarry Smith mat->assembled = PETSC_TRUE; 2016273d9f13SBarry Smith mat->preallocated = PETSC_TRUE; 20178965ea79SLois Curfman McInnes 2018e0fa3b82SLois Curfman McInnes mat->insertmode = NOT_SET_VALUES; 20193782ba37SSatish Balay a->donotstash = oldmat->donotstash; 2020e04c1aa4SHong Zhang 20219566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->rmap, &mat->rmap)); 20229566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->cmap, &mat->cmap)); 20238965ea79SLois Curfman McInnes 20249566063dSJacob Faibussowitsch PetscCall(MatDuplicate(oldmat->A, cpvalues, &a->A)); 202501b82886SBarry Smith 20268965ea79SLois Curfman McInnes *newmat = mat; 20273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20288965ea79SLois Curfman McInnes } 20298965ea79SLois Curfman McInnes 203066976f2fSJacob Faibussowitsch static PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer) 2031d71ae5a4SJacob Faibussowitsch { 203287d5ce66SSatish Balay PetscBool isbinary; 203387d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 203487d5ce66SSatish Balay PetscBool ishdf5; 203587d5ce66SSatish Balay #endif 2036eb91f321SVaclav Hapla 2037eb91f321SVaclav Hapla PetscFunctionBegin; 2038eb91f321SVaclav Hapla PetscValidHeaderSpecific(newMat, MAT_CLASSID, 1); 2039eb91f321SVaclav Hapla PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 2040eb91f321SVaclav Hapla /* force binary viewer to load .info file if it has not yet done so */ 20419566063dSJacob Faibussowitsch PetscCall(PetscViewerSetUp(viewer)); 20429566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 204387d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 20449566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERHDF5, &ishdf5)); 204587d5ce66SSatish Balay #endif 2046eb91f321SVaclav Hapla if (isbinary) { 20479566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_Binary(newMat, viewer)); 2048eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5) 204987d5ce66SSatish Balay } else if (ishdf5) { 20509566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_HDF5(newMat, viewer)); 2051eb91f321SVaclav Hapla #endif 205298921bdaSJacob Faibussowitsch } else SETERRQ(PetscObjectComm((PetscObject)newMat), PETSC_ERR_SUP, "Viewer type %s not yet supported for reading %s matrices", ((PetscObject)viewer)->type_name, ((PetscObject)newMat)->type_name); 20533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2054eb91f321SVaclav Hapla } 2055eb91f321SVaclav Hapla 2056d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatEqual_MPIDense(Mat A, Mat B, PetscBool *flag) 2057d71ae5a4SJacob Faibussowitsch { 20586e4ee0c6SHong Zhang Mat_MPIDense *matB = (Mat_MPIDense *)B->data, *matA = (Mat_MPIDense *)A->data; 20596e4ee0c6SHong Zhang Mat a, b; 206090ace30eSBarry Smith 20616e4ee0c6SHong Zhang PetscFunctionBegin; 20626e4ee0c6SHong Zhang a = matA->A; 20636e4ee0c6SHong Zhang b = matB->A; 20642cf15c64SPierre Jolivet PetscCall(MatEqual(a, b, flag)); 2065462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, flag, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 20663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 20676e4ee0c6SHong Zhang } 206890ace30eSBarry Smith 206966976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data) 2070d71ae5a4SJacob Faibussowitsch { 20716718818eSStefano Zampini Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data; 2072baa3c1c6SHong Zhang 2073baa3c1c6SHong Zhang PetscFunctionBegin; 20749566063dSJacob Faibussowitsch PetscCall(PetscFree2(atb->sendbuf, atb->recvcounts)); 20759566063dSJacob Faibussowitsch PetscCall(MatDestroy(&atb->atb)); 20769566063dSJacob Faibussowitsch PetscCall(PetscFree(atb)); 20773ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2078baa3c1c6SHong Zhang } 2079baa3c1c6SHong Zhang 208066976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data) 2081d71ae5a4SJacob Faibussowitsch { 20826718818eSStefano Zampini Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data; 2083cc48ffa7SToby Isaac 2084cc48ffa7SToby Isaac PetscFunctionBegin; 20859566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->buf[0], abt->buf[1])); 20869566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->recvcounts, abt->recvdispls)); 20879566063dSJacob Faibussowitsch PetscCall(PetscFree(abt)); 20883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2089cc48ffa7SToby Isaac } 2090cc48ffa7SToby Isaac 2091d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2092d71ae5a4SJacob Faibussowitsch { 2093baa3c1c6SHong Zhang Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 20946718818eSStefano Zampini Mat_TransMatMultDense *atb; 2095cb20be35SHong Zhang MPI_Comm comm; 20966718818eSStefano Zampini PetscMPIInt size, *recvcounts; 20976718818eSStefano Zampini PetscScalar *carray, *sendbuf; 2098637a0070SStefano Zampini const PetscScalar *atbarray; 2099a1f9a5e6SStefano Zampini PetscInt i, cN = C->cmap->N, proc, k, j, lda; 2100e68c0b26SHong Zhang const PetscInt *ranges; 2101cb20be35SHong Zhang 2102cb20be35SHong Zhang PetscFunctionBegin; 21036718818eSStefano Zampini MatCheckProduct(C, 3); 21045f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 21056718818eSStefano Zampini atb = (Mat_TransMatMultDense *)C->product->data; 21066718818eSStefano Zampini recvcounts = atb->recvcounts; 21076718818eSStefano Zampini sendbuf = atb->sendbuf; 21086718818eSStefano Zampini 21099566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 21109566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 2111e68c0b26SHong Zhang 2112c5ef1628SHong Zhang /* compute atbarray = aseq^T * bseq */ 2113fb842aefSJose E. Roman PetscCall(MatTransposeMatMult(a->A, b->A, atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX, PETSC_DETERMINE, &atb->atb)); 2114cb20be35SHong Zhang 21159566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 2116cb20be35SHong Zhang 2117*d016bddeSToby Isaac if (ranges[1] == C->rmap->N) { 2118*d016bddeSToby Isaac /* all of the values are being reduced to rank 0: optimize this case to use MPI_Reduce and GPU aware MPI if available */ 2119*d016bddeSToby Isaac PetscInt atb_lda, c_lda; 2120*d016bddeSToby Isaac Mat atb_local = atb->atb; 2121*d016bddeSToby Isaac Mat atb_alloc = NULL; 2122*d016bddeSToby Isaac Mat c_local = c->A; 2123*d016bddeSToby Isaac Mat c_alloc = NULL; 2124*d016bddeSToby Isaac PetscMemType atb_memtype, c_memtype; 2125*d016bddeSToby Isaac const PetscScalar *atb_array = NULL; 2126*d016bddeSToby Isaac MPI_Datatype vector_type; 2127*d016bddeSToby Isaac PetscScalar *c_array = NULL; 2128*d016bddeSToby Isaac PetscMPIInt rank; 2129*d016bddeSToby Isaac 2130*d016bddeSToby Isaac PetscCallMPI(MPI_Comm_rank(comm, &rank)); 2131*d016bddeSToby Isaac 2132*d016bddeSToby Isaac PetscCall(MatDenseGetLDA(atb_local, &atb_lda)); 2133*d016bddeSToby Isaac if (atb_lda != C->rmap->N) { 2134*d016bddeSToby Isaac // copy atb to a matrix that will have lda == the number of rows 2135*d016bddeSToby Isaac PetscCall(MatDuplicate(atb_local, MAT_DO_NOT_COPY_VALUES, &atb_alloc)); 2136*d016bddeSToby Isaac PetscCall(MatCopy(atb_local, atb_alloc, DIFFERENT_NONZERO_PATTERN)); 2137*d016bddeSToby Isaac atb_local = atb_alloc; 2138*d016bddeSToby Isaac } 2139*d016bddeSToby Isaac 2140*d016bddeSToby Isaac if (rank == 0) { 2141*d016bddeSToby Isaac PetscCall(MatDenseGetLDA(c_local, &c_lda)); 2142*d016bddeSToby Isaac if (c_lda != C->rmap->N) { 2143*d016bddeSToby Isaac // copy c to a matrix that will have lda == the number of rows 2144*d016bddeSToby Isaac PetscCall(MatDuplicate(c_local, MAT_DO_NOT_COPY_VALUES, &c_alloc)); 2145*d016bddeSToby Isaac c_local = c_alloc; 2146*d016bddeSToby Isaac } 2147*d016bddeSToby Isaac PetscCall(MatZeroEntries(c_local)); 2148*d016bddeSToby Isaac } 2149*d016bddeSToby Isaac /* atb_local and c_local have nrows = lda = A->cmap->N and ncols = 2150*d016bddeSToby Isaac * B->cmap->N: use the a->Mvctx to use the best reduction method */ 2151*d016bddeSToby Isaac if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 2152*d016bddeSToby Isaac vector_type = MPIU_SCALAR; 2153*d016bddeSToby Isaac if (B->cmap->N > 1) { 2154*d016bddeSToby Isaac PetscCallMPI(MPI_Type_contiguous(B->cmap->N, MPIU_SCALAR, &vector_type)); 2155*d016bddeSToby Isaac PetscCallMPI(MPI_Type_commit(&vector_type)); 2156*d016bddeSToby Isaac } 2157*d016bddeSToby Isaac PetscCall(MatDenseGetArrayReadAndMemType(atb_local, &atb_array, &atb_memtype)); 2158*d016bddeSToby Isaac PetscCall(MatDenseGetArrayWriteAndMemType(c_local, &c_array, &c_memtype)); 2159*d016bddeSToby Isaac PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, vector_type, atb_memtype, atb_array, c_memtype, c_array, MPIU_SUM)); 2160*d016bddeSToby Isaac PetscCall(PetscSFReduceEnd(a->Mvctx, vector_type, atb_array, c_array, MPIU_SUM)); 2161*d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayWriteAndMemType(c_local, &c_array)); 2162*d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayReadAndMemType(atb_local, &atb_array)); 2163*d016bddeSToby Isaac if (rank == 0 && c_local != c->A) PetscCall(MatCopy(c_local, c->A, DIFFERENT_NONZERO_PATTERN)); 2164*d016bddeSToby Isaac if (B->cmap->N > 1) PetscCallMPI(MPI_Type_free(&vector_type)); 2165*d016bddeSToby Isaac PetscCall(MatDestroy(&atb_alloc)); 2166*d016bddeSToby Isaac PetscCall(MatDestroy(&c_alloc)); 2167*d016bddeSToby Isaac PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 2168*d016bddeSToby Isaac PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 2169*d016bddeSToby Isaac PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 2170*d016bddeSToby Isaac PetscFunctionReturn(PETSC_SUCCESS); 2171*d016bddeSToby Isaac } 2172*d016bddeSToby Isaac 2173660d5466SHong Zhang /* arrange atbarray into sendbuf */ 21749566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(atb->atb, &atbarray)); 21759566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(atb->atb, &lda)); 2176637a0070SStefano Zampini for (proc = 0, k = 0; proc < size; proc++) { 2177baa3c1c6SHong Zhang for (j = 0; j < cN; j++) { 2178a1f9a5e6SStefano Zampini for (i = ranges[proc]; i < ranges[proc + 1]; i++) sendbuf[k++] = atbarray[i + j * lda]; 2179cb20be35SHong Zhang } 2180cb20be35SHong Zhang } 21819566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(atb->atb, &atbarray)); 2182637a0070SStefano Zampini 2183c5ef1628SHong Zhang /* sum all atbarray to local values of C */ 21849566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &carray)); 21859566063dSJacob Faibussowitsch PetscCallMPI(MPI_Reduce_scatter(sendbuf, carray, recvcounts, MPIU_SCALAR, MPIU_SUM, comm)); 21869566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &carray)); 218767af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 21889566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 21899566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 21903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2191cb20be35SHong Zhang } 2192cb20be35SHong Zhang 2193d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2194d71ae5a4SJacob Faibussowitsch { 2195cb20be35SHong Zhang MPI_Comm comm; 2196baa3c1c6SHong Zhang PetscMPIInt size; 2197660d5466SHong Zhang PetscInt cm = A->cmap->n, cM, cN = B->cmap->N; 2198baa3c1c6SHong Zhang Mat_TransMatMultDense *atb; 219947d993e7Ssuyashtn PetscBool cisdense = PETSC_FALSE; 22000acaeb71SStefano Zampini const PetscInt *ranges; 2201cb20be35SHong Zhang 2202cb20be35SHong Zhang PetscFunctionBegin; 22038f83a4d9SJacob Faibussowitsch MatCheckProduct(C, 4); 22045f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 22059566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 2206cb20be35SHong Zhang if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) { 220798921bdaSJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2208cb20be35SHong Zhang } 2209cb20be35SHong Zhang 22104222ddf1SHong Zhang /* create matrix product C */ 22119566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, cm, B->cmap->n, A->cmap->N, B->cmap->N)); 221247d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 22139566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSECUDA, "")); 221447d993e7Ssuyashtn #endif 221547d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 221647d993e7Ssuyashtn PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSEHIP, "")); 221747d993e7Ssuyashtn #endif 221848a46eb9SPierre Jolivet if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)A)->type_name)); 22199566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2220baa3c1c6SHong Zhang 22214222ddf1SHong Zhang /* create data structure for reuse C */ 22229566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22239566063dSJacob Faibussowitsch PetscCall(PetscNew(&atb)); 22244222ddf1SHong Zhang cM = C->rmap->N; 22259566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(cM * cN, &atb->sendbuf, size, &atb->recvcounts)); 22269566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 22276497c311SBarry Smith for (PetscMPIInt i = 0; i < size; i++) PetscCall(PetscMPIIntCast((ranges[i + 1] - ranges[i]) * cN, &atb->recvcounts[i])); 22286718818eSStefano Zampini C->product->data = atb; 22296718818eSStefano Zampini C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense; 22303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2231cb20be35SHong Zhang } 2232cb20be35SHong Zhang 2233d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2234d71ae5a4SJacob Faibussowitsch { 2235cc48ffa7SToby Isaac MPI_Comm comm; 2236cc48ffa7SToby Isaac PetscMPIInt i, size; 2237cc48ffa7SToby Isaac PetscInt maxRows, bufsiz; 2238cc48ffa7SToby Isaac PetscMPIInt tag; 22394222ddf1SHong Zhang PetscInt alg; 2240cc48ffa7SToby Isaac Mat_MatTransMultDense *abt; 22414222ddf1SHong Zhang Mat_Product *product = C->product; 22424222ddf1SHong Zhang PetscBool flg; 2243cc48ffa7SToby Isaac 2244cc48ffa7SToby Isaac PetscFunctionBegin; 22456718818eSStefano Zampini MatCheckProduct(C, 4); 22465f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 22474222ddf1SHong Zhang /* check local size of A and B */ 22485f80ce2aSJacob Faibussowitsch PetscCheck(A->cmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")", A->cmap->n, B->cmap->n); 2249cc48ffa7SToby Isaac 22509566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "allgatherv", &flg)); 2251637a0070SStefano Zampini alg = flg ? 0 : 1; 2252cc48ffa7SToby Isaac 22534222ddf1SHong Zhang /* setup matrix product C */ 22549566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, A->rmap->n, B->rmap->n, A->rmap->N, B->rmap->N)); 22559566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATMPIDENSE)); 22569566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 22579566063dSJacob Faibussowitsch PetscCall(PetscObjectGetNewTag((PetscObject)C, &tag)); 22584222ddf1SHong Zhang 22594222ddf1SHong Zhang /* create data structure for reuse C */ 22609566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 22619566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22629566063dSJacob Faibussowitsch PetscCall(PetscNew(&abt)); 2263cc48ffa7SToby Isaac abt->tag = tag; 2264faa55883SToby Isaac abt->alg = alg; 2265faa55883SToby Isaac switch (alg) { 22664222ddf1SHong Zhang case 1: /* alg: "cyclic" */ 226757508eceSPierre Jolivet for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, B->rmap->range[i + 1] - B->rmap->range[i]); 2268cc48ffa7SToby Isaac bufsiz = A->cmap->N * maxRows; 2269f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(bufsiz, &abt->buf[0], bufsiz, &abt->buf[1])); 2270faa55883SToby Isaac break; 22714222ddf1SHong Zhang default: /* alg: "allgatherv" */ 2272f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &abt->buf[0], B->rmap->N * B->cmap->N, &abt->buf[1])); 2273f4f49eeaSPierre Jolivet PetscCall(PetscMalloc2(size, &abt->recvcounts, size + 1, &abt->recvdispls)); 22746497c311SBarry Smith for (i = 0; i <= size; i++) PetscCall(PetscMPIIntCast(B->rmap->range[i] * A->cmap->N, &abt->recvdispls[i])); 22756497c311SBarry Smith for (i = 0; i < size; i++) PetscCall(PetscMPIIntCast(abt->recvdispls[i + 1] - abt->recvdispls[i], &abt->recvcounts[i])); 2276faa55883SToby Isaac break; 2277faa55883SToby Isaac } 2278cc48ffa7SToby Isaac 22796718818eSStefano Zampini C->product->data = abt; 22806718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense; 22814222ddf1SHong Zhang C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense; 22823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2283cc48ffa7SToby Isaac } 2284cc48ffa7SToby Isaac 2285d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C) 2286d71ae5a4SJacob Faibussowitsch { 2287cc48ffa7SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 22886718818eSStefano Zampini Mat_MatTransMultDense *abt; 2289cc48ffa7SToby Isaac MPI_Comm comm; 22906497c311SBarry Smith PetscMPIInt rank, size, sendto, recvfrom, recvisfrom; 2291f4259b30SLisandro Dalcin PetscScalar *sendbuf, *recvbuf = NULL, *cv; 22926497c311SBarry Smith PetscInt i, cK = A->cmap->N, sendsiz, recvsiz, k, j, bn; 2293cc48ffa7SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2294637a0070SStefano Zampini const PetscScalar *av, *bv; 229523fff9afSBarry Smith PetscBLASInt cm, cn, ck, alda, blda = 0, clda; 2296cc48ffa7SToby Isaac MPI_Request reqs[2]; 2297cc48ffa7SToby Isaac const PetscInt *ranges; 2298cc48ffa7SToby Isaac 2299cc48ffa7SToby Isaac PetscFunctionBegin; 23006718818eSStefano Zampini MatCheckProduct(C, 3); 23015f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 23026718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 23039566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 23049566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 23059566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 23069566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 23079566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 23089566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 23099566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 23109566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 23119566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &i)); 23129566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &blda)); 23139566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 23149566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 23159566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(B, &ranges)); 2316cc48ffa7SToby Isaac bn = B->rmap->n; 2317637a0070SStefano Zampini if (blda == bn) { 2318637a0070SStefano Zampini sendbuf = (PetscScalar *)bv; 2319cc48ffa7SToby Isaac } else { 2320cc48ffa7SToby Isaac sendbuf = abt->buf[0]; 2321cc48ffa7SToby Isaac for (k = 0, i = 0; i < cK; i++) { 2322ad540459SPierre Jolivet for (j = 0; j < bn; j++, k++) sendbuf[k] = bv[i * blda + j]; 2323cc48ffa7SToby Isaac } 2324cc48ffa7SToby Isaac } 2325cc48ffa7SToby Isaac if (size > 1) { 2326cc48ffa7SToby Isaac sendto = (rank + size - 1) % size; 2327cc48ffa7SToby Isaac recvfrom = (rank + size + 1) % size; 2328cc48ffa7SToby Isaac } else { 2329cc48ffa7SToby Isaac sendto = recvfrom = 0; 2330cc48ffa7SToby Isaac } 23319566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 23329566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 2333cc48ffa7SToby Isaac recvisfrom = rank; 2334cc48ffa7SToby Isaac for (i = 0; i < size; i++) { 2335cc48ffa7SToby Isaac /* we have finished receiving in sending, bufs can be read/modified */ 23366497c311SBarry Smith PetscMPIInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */ 2337cc48ffa7SToby Isaac PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom]; 2338cc48ffa7SToby Isaac 2339cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2340cc48ffa7SToby Isaac /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */ 2341cc48ffa7SToby Isaac sendsiz = cK * bn; 2342cc48ffa7SToby Isaac recvsiz = cK * nextbn; 2343cc48ffa7SToby Isaac recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1]; 23446497c311SBarry Smith PetscCallMPI(MPIU_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0])); 23456497c311SBarry Smith PetscCallMPI(MPIU_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1])); 2346cc48ffa7SToby Isaac } 2347cc48ffa7SToby Isaac 2348cc48ffa7SToby Isaac /* local aseq * sendbuf^T */ 23499566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn)); 2350792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "T", &cm, &cn, &ck, &_DOne, av, &alda, sendbuf, &cn, &_DZero, cv + clda * ranges[recvisfrom], &clda)); 2351cc48ffa7SToby Isaac 2352cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2353cc48ffa7SToby Isaac /* wait for the sends and receives to complete, swap sendbuf and recvbuf */ 23549566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE)); 2355cc48ffa7SToby Isaac } 2356cc48ffa7SToby Isaac bn = nextbn; 2357cc48ffa7SToby Isaac recvisfrom = nextrecvisfrom; 2358cc48ffa7SToby Isaac sendbuf = recvbuf; 2359cc48ffa7SToby Isaac } 23609566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 23619566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 23629566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 236367af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 23649566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 23659566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 23663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2367cc48ffa7SToby Isaac } 2368cc48ffa7SToby Isaac 2369d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C) 2370d71ae5a4SJacob Faibussowitsch { 2371faa55883SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 23726718818eSStefano Zampini Mat_MatTransMultDense *abt; 2373faa55883SToby Isaac MPI_Comm comm; 23746497c311SBarry Smith PetscMPIInt size, ibn; 2375637a0070SStefano Zampini PetscScalar *cv, *sendbuf, *recvbuf; 2376637a0070SStefano Zampini const PetscScalar *av, *bv; 2377637a0070SStefano Zampini PetscInt blda, i, cK = A->cmap->N, k, j, bn; 2378faa55883SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2379637a0070SStefano Zampini PetscBLASInt cm, cn, ck, alda, clda; 2380faa55883SToby Isaac 2381faa55883SToby Isaac PetscFunctionBegin; 23826718818eSStefano Zampini MatCheckProduct(C, 3); 23835f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 23846718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 23859566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 23869566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 23879566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 23889566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 23899566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 23909566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 23919566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 23929566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &blda)); 23939566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 23949566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 2395faa55883SToby Isaac /* copy transpose of B into buf[0] */ 2396faa55883SToby Isaac bn = B->rmap->n; 2397faa55883SToby Isaac sendbuf = abt->buf[0]; 2398faa55883SToby Isaac recvbuf = abt->buf[1]; 2399faa55883SToby Isaac for (k = 0, j = 0; j < bn; j++) { 2400ad540459SPierre Jolivet for (i = 0; i < cK; i++, k++) sendbuf[k] = bv[i * blda + j]; 2401faa55883SToby Isaac } 24029566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 24036497c311SBarry Smith PetscCall(PetscMPIIntCast(bn * cK, &ibn)); 24046497c311SBarry Smith PetscCallMPI(MPI_Allgatherv(sendbuf, ibn, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm)); 24059566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 24069566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 24079566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->cmap->n, &cn)); 2408792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "N", &cm, &cn, &ck, &_DOne, av, &alda, recvbuf, &ck, &_DZero, cv, &clda)); 24099566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 24109566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 24119566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 241267af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 24139566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 24149566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 24153ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2416faa55883SToby Isaac } 2417faa55883SToby Isaac 2418d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2419d71ae5a4SJacob Faibussowitsch { 24206718818eSStefano Zampini Mat_MatTransMultDense *abt; 2421faa55883SToby Isaac 2422faa55883SToby Isaac PetscFunctionBegin; 24236718818eSStefano Zampini MatCheckProduct(C, 3); 24245f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 24256718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 2426faa55883SToby Isaac switch (abt->alg) { 2427d71ae5a4SJacob Faibussowitsch case 1: 2428d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C)); 2429d71ae5a4SJacob Faibussowitsch break; 2430d71ae5a4SJacob Faibussowitsch default: 2431d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C)); 2432d71ae5a4SJacob Faibussowitsch break; 2433faa55883SToby Isaac } 24343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2435faa55883SToby Isaac } 2436faa55883SToby Isaac 243766976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data) 2438d71ae5a4SJacob Faibussowitsch { 24396718818eSStefano Zampini Mat_MatMultDense *ab = (Mat_MatMultDense *)data; 2440320f2790SHong Zhang 2441320f2790SHong Zhang PetscFunctionBegin; 24429566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ce)); 24439566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ae)); 24449566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Be)); 24459566063dSJacob Faibussowitsch PetscCall(PetscFree(ab)); 24463ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2447320f2790SHong Zhang } 2448320f2790SHong Zhang 24495d8c7819SPierre Jolivet static PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2450d71ae5a4SJacob Faibussowitsch { 24516718818eSStefano Zampini Mat_MatMultDense *ab; 24525d8c7819SPierre Jolivet Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 2453*d016bddeSToby Isaac Mat_MPIDense *b = (Mat_MPIDense *)B->data; 2454320f2790SHong Zhang 2455320f2790SHong Zhang PetscFunctionBegin; 24566718818eSStefano Zampini MatCheckProduct(C, 3); 24575f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Missing product data"); 24586718818eSStefano Zampini ab = (Mat_MatMultDense *)C->product->data; 24595d8c7819SPierre Jolivet if (ab->Ae && ab->Ce) { 24605d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 24619566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(A, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Ae)); 24629566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(B, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Be)); 24639566063dSJacob Faibussowitsch PetscCall(MatMatMultNumeric_Elemental(ab->Ae, ab->Be, ab->Ce)); 24649566063dSJacob Faibussowitsch PetscCall(MatConvert(ab->Ce, MATMPIDENSE, MAT_REUSE_MATRIX, &C)); 24655d8c7819SPierre Jolivet #else 24665d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 24675d8c7819SPierre Jolivet #endif 24685d8c7819SPierre Jolivet } else { 2469*d016bddeSToby Isaac MPI_Comm comm; 24705d8c7819SPierre Jolivet const PetscScalar *read; 24715d8c7819SPierre Jolivet PetscScalar *write; 24725d8c7819SPierre Jolivet PetscInt lda; 2473*d016bddeSToby Isaac const PetscInt *ranges; 2474*d016bddeSToby Isaac PetscMPIInt size; 24755d8c7819SPierre Jolivet 2476*d016bddeSToby Isaac if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); /* cannot be done during the symbolic phase because of possible calls to MatProductReplaceMats() */ 2477*d016bddeSToby Isaac comm = PetscObjectComm((PetscObject)B); 2478*d016bddeSToby Isaac PetscCallMPI(MPI_Comm_size(comm, &size)); 2479*d016bddeSToby Isaac PetscCall(PetscLayoutGetRanges(B->rmap, &ranges)); 2480*d016bddeSToby Isaac if (ranges[1] == ranges[size]) { 2481*d016bddeSToby Isaac // optimize for the case where the B matrix is broadcast from rank 0 2482*d016bddeSToby Isaac PetscInt b_lda, be_lda; 2483*d016bddeSToby Isaac Mat b_local = b->A; 2484*d016bddeSToby Isaac Mat b_alloc = NULL; 2485*d016bddeSToby Isaac Mat be_local = ab->Be; 2486*d016bddeSToby Isaac Mat be_alloc = NULL; 2487*d016bddeSToby Isaac PetscMemType b_memtype, be_memtype; 2488*d016bddeSToby Isaac const PetscScalar *b_array = NULL; 2489*d016bddeSToby Isaac MPI_Datatype vector_type; 2490*d016bddeSToby Isaac PetscScalar *be_array = NULL; 2491*d016bddeSToby Isaac PetscMPIInt rank; 2492*d016bddeSToby Isaac 2493*d016bddeSToby Isaac PetscCallMPI(MPI_Comm_rank(comm, &rank)); 2494*d016bddeSToby Isaac PetscCall(MatDenseGetLDA(be_local, &be_lda)); 2495*d016bddeSToby Isaac if (be_lda != B->rmap->N) { 2496*d016bddeSToby Isaac PetscCall(MatDuplicate(be_local, MAT_DO_NOT_COPY_VALUES, &be_alloc)); 2497*d016bddeSToby Isaac be_local = be_alloc; 2498*d016bddeSToby Isaac } 2499*d016bddeSToby Isaac 2500*d016bddeSToby Isaac if (rank == 0) { 2501*d016bddeSToby Isaac PetscCall(MatDenseGetLDA(b_local, &b_lda)); 2502*d016bddeSToby Isaac if (b_lda != B->rmap->N) { 2503*d016bddeSToby Isaac PetscCall(MatDuplicate(b_local, MAT_DO_NOT_COPY_VALUES, &b_alloc)); 2504*d016bddeSToby Isaac PetscCall(MatCopy(b_local, b_alloc, DIFFERENT_NONZERO_PATTERN)); 2505*d016bddeSToby Isaac b_local = b_alloc; 2506*d016bddeSToby Isaac } 2507*d016bddeSToby Isaac } 2508*d016bddeSToby Isaac PetscCallMPI(MPI_Type_contiguous(B->cmap->N, MPIU_SCALAR, &vector_type)); 2509*d016bddeSToby Isaac PetscCallMPI(MPI_Type_commit(&vector_type)); 2510*d016bddeSToby Isaac PetscCall(MatDenseGetArrayReadAndMemType(b_local, &b_array, &b_memtype)); 2511*d016bddeSToby Isaac PetscCall(MatDenseGetArrayWriteAndMemType(be_local, &be_array, &be_memtype)); 2512*d016bddeSToby Isaac PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, vector_type, b_memtype, b_array, be_memtype, be_array, MPI_REPLACE)); 2513*d016bddeSToby Isaac PetscCall(PetscSFBcastEnd(mdn->Mvctx, vector_type, b_array, be_array, MPI_REPLACE)); 2514*d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayWriteAndMemType(be_local, &be_array)); 2515*d016bddeSToby Isaac PetscCall(MatDenseRestoreArrayReadAndMemType(b_local, &b_array)); 2516*d016bddeSToby Isaac if (be_local != ab->Be) PetscCall(MatCopy(be_local, ab->Be, DIFFERENT_NONZERO_PATTERN)); 2517*d016bddeSToby Isaac PetscCallMPI(MPI_Type_free(&vector_type)); 2518*d016bddeSToby Isaac PetscCall(MatDestroy(&be_alloc)); 2519*d016bddeSToby Isaac PetscCall(MatDestroy(&b_alloc)); 2520*d016bddeSToby Isaac } else { 25215d8c7819SPierre Jolivet PetscCall(MatDenseGetLDA(B, &lda)); 25225d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayRead(B, &read)); 25235d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayWrite(ab->Be, &write)); 25245d8c7819SPierre Jolivet for (PetscInt i = 0; i < C->cmap->N; ++i) { 25255d8c7819SPierre Jolivet PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 25265d8c7819SPierre Jolivet PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 25275d8c7819SPierre Jolivet } 25285d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayWrite(ab->Be, &write)); 25295d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(B, &read)); 2530*d016bddeSToby Isaac } 2531f4f49eeaSPierre Jolivet PetscCall(MatMatMultNumeric_SeqDense_SeqDense(((Mat_MPIDense *)A->data)->A, ab->Be, ((Mat_MPIDense *)C->data)->A)); 25325d8c7819SPierre Jolivet } 25333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2534320f2790SHong Zhang } 2535320f2790SHong Zhang 2536d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2537d71ae5a4SJacob Faibussowitsch { 25385d8c7819SPierre Jolivet Mat_Product *product = C->product; 25395d8c7819SPierre Jolivet PetscInt alg; 2540320f2790SHong Zhang Mat_MatMultDense *ab; 25415d8c7819SPierre Jolivet PetscBool flg; 2542320f2790SHong Zhang 2543320f2790SHong Zhang PetscFunctionBegin; 25446718818eSStefano Zampini MatCheckProduct(C, 4); 25455f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 25464222ddf1SHong Zhang /* check local size of A and B */ 25475d8c7819SPierre Jolivet PetscCheck(A->cmap->rstart == B->rmap->rstart && A->cmap->rend == B->rmap->rend, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ", %" PetscInt_FMT ")", 25485d8c7819SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2549320f2790SHong Zhang 25505d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "petsc", &flg)); 25515d8c7819SPierre Jolivet alg = flg ? 0 : 1; 25524222ddf1SHong Zhang 25534222ddf1SHong Zhang /* setup C */ 25545d8c7819SPierre Jolivet PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, A->rmap->N, B->cmap->N)); 25555d8c7819SPierre Jolivet PetscCall(MatSetType(C, MATMPIDENSE)); 25569566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2557320f2790SHong Zhang 2558320f2790SHong Zhang /* create data structure for reuse Cdense */ 25599566063dSJacob Faibussowitsch PetscCall(PetscNew(&ab)); 25605d8c7819SPierre Jolivet 25615d8c7819SPierre Jolivet switch (alg) { 25625d8c7819SPierre Jolivet case 1: /* alg: "elemental" */ 25635d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 25645d8c7819SPierre Jolivet /* create elemental matrices Ae and Be */ 25655d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &ab->Ae)); 25665d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Ae, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 25675d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Ae, MATELEMENTAL)); 25685d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Ae)); 25695d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Ae, MAT_ROW_ORIENTED, PETSC_FALSE)); 25705d8c7819SPierre Jolivet 25715d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &ab->Be)); 25725d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Be, PETSC_DECIDE, PETSC_DECIDE, B->rmap->N, B->cmap->N)); 25735d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Be, MATELEMENTAL)); 25745d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Be)); 25755d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Be, MAT_ROW_ORIENTED, PETSC_FALSE)); 25765d8c7819SPierre Jolivet 25775d8c7819SPierre Jolivet /* compute symbolic Ce = Ae*Be */ 25785d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)C), &ab->Ce)); 25795d8c7819SPierre Jolivet PetscCall(MatMatMultSymbolic_Elemental(ab->Ae, ab->Be, fill, ab->Ce)); 25805d8c7819SPierre Jolivet #else 25815d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 25825d8c7819SPierre Jolivet #endif 25835d8c7819SPierre Jolivet break; 25845d8c7819SPierre Jolivet default: /* alg: "petsc" */ 25855d8c7819SPierre Jolivet ab->Ae = NULL; 25865d8c7819SPierre Jolivet PetscCall(MatCreateSeqDense(PETSC_COMM_SELF, A->cmap->N, B->cmap->N, NULL, &ab->Be)); 25875d8c7819SPierre Jolivet ab->Ce = NULL; 25885d8c7819SPierre Jolivet break; 25895d8c7819SPierre Jolivet } 25906718818eSStefano Zampini 25916718818eSStefano Zampini C->product->data = ab; 25926718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense; 25934222ddf1SHong Zhang C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense; 25943ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2595320f2790SHong Zhang } 25962ef1f0ffSBarry Smith 2597d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C) 2598d71ae5a4SJacob Faibussowitsch { 25995d8c7819SPierre Jolivet Mat_Product *product = C->product; 26005d8c7819SPierre Jolivet const char *algTypes[2] = {"petsc", "elemental"}; 26015d8c7819SPierre Jolivet PetscInt alg, nalg = PetscDefined(HAVE_ELEMENTAL) ? 2 : 1; 26025d8c7819SPierre Jolivet PetscBool flg = PETSC_FALSE; 26035d8c7819SPierre Jolivet 26044d86920dSPierre Jolivet PetscFunctionBegin; 26055d8c7819SPierre Jolivet /* Set default algorithm */ 2606f0b74427SPierre Jolivet alg = 0; /* default is PETSc */ 26075d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "default", &flg)); 2608835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26095d8c7819SPierre Jolivet 26105d8c7819SPierre Jolivet /* Get runtime option */ 26115d8c7819SPierre Jolivet PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_AB", "Mat"); 26125d8c7819SPierre Jolivet PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_AB", algTypes, nalg, algTypes[alg], &alg, &flg)); 26135d8c7819SPierre Jolivet PetscOptionsEnd(); 2614835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26155d8c7819SPierre Jolivet 26164222ddf1SHong Zhang C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense; 26174222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_AB; 26183ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2619320f2790SHong Zhang } 262086aefd0dSHong Zhang 2621d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C) 2622d71ae5a4SJacob Faibussowitsch { 26234222ddf1SHong Zhang Mat_Product *product = C->product; 26244222ddf1SHong Zhang Mat A = product->A, B = product->B; 26254222ddf1SHong Zhang 26264222ddf1SHong Zhang PetscFunctionBegin; 262707e90273SPierre Jolivet PetscCheck(A->rmap->rstart == B->rmap->rstart && A->rmap->rend == B->rmap->rend, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")", 262807e90273SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 26296718818eSStefano Zampini C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense; 26306718818eSStefano Zampini C->ops->productsymbolic = MatProductSymbolic_AtB; 26313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26324222ddf1SHong Zhang } 26334222ddf1SHong Zhang 2634d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C) 2635d71ae5a4SJacob Faibussowitsch { 26364222ddf1SHong Zhang Mat_Product *product = C->product; 26374222ddf1SHong Zhang const char *algTypes[2] = {"allgatherv", "cyclic"}; 26384222ddf1SHong Zhang PetscInt alg, nalg = 2; 26394222ddf1SHong Zhang PetscBool flg = PETSC_FALSE; 26404222ddf1SHong Zhang 26414222ddf1SHong Zhang PetscFunctionBegin; 26424222ddf1SHong Zhang /* Set default algorithm */ 26434222ddf1SHong Zhang alg = 0; /* default is allgatherv */ 26449566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "default", &flg)); 2645835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26464222ddf1SHong Zhang 26474222ddf1SHong Zhang /* Get runtime option */ 26484222ddf1SHong Zhang if (product->api_user) { 2649d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatMatTransposeMult", "Mat"); 26509566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via", "Algorithmic approach", "MatMatTransposeMult", algTypes, nalg, algTypes[alg], &alg, &flg)); 2651d0609cedSBarry Smith PetscOptionsEnd(); 26524222ddf1SHong Zhang } else { 2653d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_ABt", "Mat"); 26549566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_ABt", algTypes, nalg, algTypes[alg], &alg, &flg)); 2655d0609cedSBarry Smith PetscOptionsEnd(); 26564222ddf1SHong Zhang } 2657835f2295SStefano Zampini if (flg) PetscCall(MatProductSetAlgorithm(C, algTypes[alg])); 26584222ddf1SHong Zhang 26594222ddf1SHong Zhang C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense; 26604222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_ABt; 26613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26624222ddf1SHong Zhang } 26634222ddf1SHong Zhang 26645d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C) 2665d71ae5a4SJacob Faibussowitsch { 26664222ddf1SHong Zhang Mat_Product *product = C->product; 26674222ddf1SHong Zhang 26684222ddf1SHong Zhang PetscFunctionBegin; 26694222ddf1SHong Zhang switch (product->type) { 2670d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AB: 2671d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AB(C)); 2672d71ae5a4SJacob Faibussowitsch break; 2673d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AtB: 2674d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AtB(C)); 2675d71ae5a4SJacob Faibussowitsch break; 2676d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABt: 2677d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_ABt(C)); 2678d71ae5a4SJacob Faibussowitsch break; 2679d71ae5a4SJacob Faibussowitsch default: 2680d71ae5a4SJacob Faibussowitsch break; 26814222ddf1SHong Zhang } 26823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 26834222ddf1SHong Zhang } 2684