1ed3cc1f0SBarry Smith /* 2ed3cc1f0SBarry Smith Basic functions for basic parallel dense matrices. 347d993e7Ssuyashtn Portions of this code are under: 447d993e7Ssuyashtn Copyright (c) 2022 Advanced Micro Devices, Inc. All rights reserved. 5ed3cc1f0SBarry Smith */ 6ed3cc1f0SBarry Smith 7c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h> /*I "petscmat.h" I*/ 88949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h> 9baa3c1c6SHong Zhang #include <petscblaslapack.h> 108965ea79SLois Curfman McInnes 11ab92ecdeSBarry Smith /*@ 1211a5261eSBarry Smith MatDenseGetLocalMatrix - For a `MATMPIDENSE` or `MATSEQDENSE` matrix returns the sequential 13ab92ecdeSBarry Smith matrix that represents the operator. For sequential matrices it returns itself. 14ab92ecdeSBarry Smith 15ab92ecdeSBarry Smith Input Parameter: 162ef1f0ffSBarry Smith . A - the sequential or MPI `MATDENSE` matrix 17ab92ecdeSBarry Smith 18ab92ecdeSBarry Smith Output Parameter: 19ab92ecdeSBarry Smith . B - the inner matrix 20ab92ecdeSBarry Smith 218e6c10adSSatish Balay Level: intermediate 228e6c10adSSatish Balay 231cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MATMPIDENSE`, `MATSEQDENSE` 24ab92ecdeSBarry Smith @*/ 25d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetLocalMatrix(Mat A, Mat *B) 26d71ae5a4SJacob Faibussowitsch { 27ab92ecdeSBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 28ace3abfcSBarry Smith PetscBool flg; 29ab92ecdeSBarry Smith 30ab92ecdeSBarry Smith PetscFunctionBegin; 31d5ea218eSStefano Zampini PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 324f572ea9SToby Isaac PetscAssertPointer(B, 2); 339566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATMPIDENSE, &flg)); 342205254eSKarl Rupp if (flg) *B = mat->A; 35f140bc17SStefano Zampini else { 369566063dSJacob Faibussowitsch PetscCall(PetscObjectBaseTypeCompare((PetscObject)A, MATSEQDENSE, &flg)); 3728b400f6SJacob Faibussowitsch PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for matrix type %s", ((PetscObject)A)->type_name); 38f140bc17SStefano Zampini *B = A; 39f140bc17SStefano Zampini } 403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 41ab92ecdeSBarry Smith } 42ab92ecdeSBarry Smith 4366976f2fSJacob Faibussowitsch static PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s) 44d71ae5a4SJacob Faibussowitsch { 45a76f77c3SStefano Zampini Mat_MPIDense *Amat = (Mat_MPIDense *)A->data; 46a76f77c3SStefano Zampini Mat_MPIDense *Bmat = (Mat_MPIDense *)B->data; 47a76f77c3SStefano Zampini 48a76f77c3SStefano Zampini PetscFunctionBegin; 499566063dSJacob Faibussowitsch PetscCall(MatCopy(Amat->A, Bmat->A, s)); 503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 51a76f77c3SStefano Zampini } 52a76f77c3SStefano Zampini 53d71ae5a4SJacob Faibussowitsch PetscErrorCode MatShift_MPIDense(Mat A, PetscScalar alpha) 54d71ae5a4SJacob Faibussowitsch { 552f605a99SJose E. Roman Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 562f605a99SJose E. Roman PetscInt j, lda, rstart = A->rmap->rstart, rend = A->rmap->rend, rend2; 572f605a99SJose E. Roman PetscScalar *v; 582f605a99SJose E. Roman 592f605a99SJose E. Roman PetscFunctionBegin; 602f605a99SJose E. Roman PetscCall(MatDenseGetArray(mat->A, &v)); 612f605a99SJose E. Roman PetscCall(MatDenseGetLDA(mat->A, &lda)); 622f605a99SJose E. Roman rend2 = PetscMin(rend, A->cmap->N); 632f605a99SJose E. Roman if (rend2 > rstart) { 642f605a99SJose E. Roman for (j = rstart; j < rend2; j++) v[j - rstart + j * lda] += alpha; 652f605a99SJose E. Roman PetscCall(PetscLogFlops(rend2 - rstart)); 662f605a99SJose E. Roman } 672f605a99SJose E. Roman PetscCall(MatDenseRestoreArray(mat->A, &v)); 683ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 692f605a99SJose E. Roman } 702f605a99SJose E. Roman 7166976f2fSJacob Faibussowitsch static PetscErrorCode MatGetRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 72d71ae5a4SJacob Faibussowitsch { 73ba8c8a56SBarry Smith Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 74d0f46423SBarry Smith PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 75ba8c8a56SBarry Smith 76ba8c8a56SBarry Smith PetscFunctionBegin; 77aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 78ba8c8a56SBarry Smith lrow = row - rstart; 799566063dSJacob Faibussowitsch PetscCall(MatGetRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 81ba8c8a56SBarry Smith } 82ba8c8a56SBarry Smith 8366976f2fSJacob Faibussowitsch static PetscErrorCode MatRestoreRow_MPIDense(Mat A, PetscInt row, PetscInt *nz, PetscInt **idx, PetscScalar **v) 84d71ae5a4SJacob Faibussowitsch { 85637a0070SStefano Zampini Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 86637a0070SStefano Zampini PetscInt lrow, rstart = A->rmap->rstart, rend = A->rmap->rend; 87ba8c8a56SBarry Smith 88ba8c8a56SBarry Smith PetscFunctionBegin; 89aed4548fSBarry Smith PetscCheck(row >= rstart && row < rend, PETSC_COMM_SELF, PETSC_ERR_SUP, "only local rows"); 90637a0070SStefano Zampini lrow = row - rstart; 919566063dSJacob Faibussowitsch PetscCall(MatRestoreRow(mat->A, lrow, nz, (const PetscInt **)idx, (const PetscScalar **)v)); 923ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 93ba8c8a56SBarry Smith } 94ba8c8a56SBarry Smith 9566976f2fSJacob Faibussowitsch static PetscErrorCode MatGetDiagonalBlock_MPIDense(Mat A, Mat *a) 96d71ae5a4SJacob Faibussowitsch { 970de54da6SSatish Balay Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 98d0f46423SBarry Smith PetscInt m = A->rmap->n, rstart = A->rmap->rstart; 9987828ca2SBarry Smith PetscScalar *array; 1000de54da6SSatish Balay MPI_Comm comm; 1014b6ae80fSStefano Zampini PetscBool flg; 10211bd1e4dSLisandro Dalcin Mat B; 1030de54da6SSatish Balay 1040de54da6SSatish Balay PetscFunctionBegin; 1059566063dSJacob Faibussowitsch PetscCall(MatHasCongruentLayouts(A, &flg)); 10628b400f6SJacob Faibussowitsch PetscCheck(flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Only square matrices supported."); 1079566063dSJacob Faibussowitsch PetscCall(PetscObjectQuery((PetscObject)A, "DiagonalBlock", (PetscObject *)&B)); 108616b8fbbSStefano Zampini if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */ 109a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 1109566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSECUDA, &flg)); 11128b400f6SJacob Faibussowitsch PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSECUDA); 112a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 11347d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mdn->A, MATSEQDENSEHIP, &flg)); 11447d993e7Ssuyashtn PetscCheck(!flg, PETSC_COMM_SELF, PETSC_ERR_SUP, "Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature", MATSEQDENSEHIP); 11547d993e7Ssuyashtn #endif 1169566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)(mdn->A), &comm)); 1179566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &B)); 1189566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, m, m, m, m)); 1199566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)mdn->A)->type_name)); 1209566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, (const PetscScalar **)&array)); 1219566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(B, array + m * rstart)); 1229566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, (const PetscScalar **)&array)); 1239566063dSJacob Faibussowitsch PetscCall(PetscObjectCompose((PetscObject)A, "DiagonalBlock", (PetscObject)B)); 12411bd1e4dSLisandro Dalcin *a = B; 1259566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 1262205254eSKarl Rupp } else *a = B; 1273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1280de54da6SSatish Balay } 1290de54da6SSatish Balay 13066976f2fSJacob Faibussowitsch static PetscErrorCode MatSetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], const PetscScalar v[], InsertMode addv) 131d71ae5a4SJacob Faibussowitsch { 13239b7565bSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)mat->data; 133d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 134ace3abfcSBarry Smith PetscBool roworiented = A->roworiented; 1358965ea79SLois Curfman McInnes 1363a40ed3dSBarry Smith PetscFunctionBegin; 1378965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 1385ef9f2a5SBarry Smith if (idxm[i] < 0) continue; 13908401ef6SPierre Jolivet PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 1408965ea79SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 1418965ea79SLois Curfman McInnes row = idxm[i] - rstart; 14239b7565bSBarry Smith if (roworiented) { 1439566063dSJacob Faibussowitsch PetscCall(MatSetValues(A->A, 1, &row, n, idxn, v + i * n, addv)); 1443a40ed3dSBarry Smith } else { 1458965ea79SLois Curfman McInnes for (j = 0; j < n; j++) { 1465ef9f2a5SBarry Smith if (idxn[j] < 0) continue; 14708401ef6SPierre Jolivet PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1489566063dSJacob Faibussowitsch PetscCall(MatSetValues(A->A, 1, &row, 1, &idxn[j], v + i + j * m, addv)); 14939b7565bSBarry Smith } 1508965ea79SLois Curfman McInnes } 1512205254eSKarl Rupp } else if (!A->donotstash) { 1525080c13bSMatthew G Knepley mat->assembled = PETSC_FALSE; 15339b7565bSBarry Smith if (roworiented) { 1549566063dSJacob Faibussowitsch PetscCall(MatStashValuesRow_Private(&mat->stash, idxm[i], n, idxn, v + i * n, PETSC_FALSE)); 155d36fbae8SSatish Balay } else { 1569566063dSJacob Faibussowitsch PetscCall(MatStashValuesCol_Private(&mat->stash, idxm[i], n, idxn, v + i, m, PETSC_FALSE)); 15739b7565bSBarry Smith } 158b49de8d1SLois Curfman McInnes } 159b49de8d1SLois Curfman McInnes } 1603ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 161b49de8d1SLois Curfman McInnes } 162b49de8d1SLois Curfman McInnes 16366976f2fSJacob Faibussowitsch static PetscErrorCode MatGetValues_MPIDense(Mat mat, PetscInt m, const PetscInt idxm[], PetscInt n, const PetscInt idxn[], PetscScalar v[]) 164d71ae5a4SJacob Faibussowitsch { 165b49de8d1SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 166d0f46423SBarry Smith PetscInt i, j, rstart = mat->rmap->rstart, rend = mat->rmap->rend, row; 167b49de8d1SLois Curfman McInnes 1683a40ed3dSBarry Smith PetscFunctionBegin; 169b49de8d1SLois Curfman McInnes for (i = 0; i < m; i++) { 17054c59aa7SJacob Faibussowitsch if (idxm[i] < 0) continue; /* negative row */ 17154c59aa7SJacob Faibussowitsch PetscCheck(idxm[i] < mat->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Row too large"); 172b49de8d1SLois Curfman McInnes if (idxm[i] >= rstart && idxm[i] < rend) { 173b49de8d1SLois Curfman McInnes row = idxm[i] - rstart; 174b49de8d1SLois Curfman McInnes for (j = 0; j < n; j++) { 17554c59aa7SJacob Faibussowitsch if (idxn[j] < 0) continue; /* negative column */ 17654c59aa7SJacob Faibussowitsch PetscCheck(idxn[j] < mat->cmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Column too large"); 1779566063dSJacob Faibussowitsch PetscCall(MatGetValues(mdn->A, 1, &row, 1, &idxn[j], v + i * n + j)); 178b49de8d1SLois Curfman McInnes } 179e7e72b3dSBarry Smith } else SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "Only local values currently supported"); 1808965ea79SLois Curfman McInnes } 1813ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1828965ea79SLois Curfman McInnes } 1838965ea79SLois Curfman McInnes 184d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A, PetscInt *lda) 185d71ae5a4SJacob Faibussowitsch { 18649a6ff4bSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 18749a6ff4bSBarry Smith 18849a6ff4bSBarry Smith PetscFunctionBegin; 1899566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, lda)); 1903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19149a6ff4bSBarry Smith } 19249a6ff4bSBarry Smith 193d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A, PetscInt lda) 194d71ae5a4SJacob Faibussowitsch { 195ad16ce7aSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 19647d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 197ad16ce7aSStefano Zampini 198ad16ce7aSStefano Zampini PetscFunctionBegin; 19917359960SJose E. Roman if (!a->A) { 20028b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2019566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 2029566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 2039566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 2049566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, A->rmap->n, A->cmap->N, A->rmap->n, A->cmap->N)); 205a51cd166SPierre Jolivet #if PetscDefined(HAVE_CUDA) 20647d993e7Ssuyashtn PetscBool iscuda; 2079566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSECUDA, &iscuda)); 20847d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 209a51cd166SPierre Jolivet #elif PetscDefined(HAVE_HIP) 21047d993e7Ssuyashtn PetscBool iship; 21147d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)A, MATMPIDENSEHIP, &iship)); 21247d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 21347d993e7Ssuyashtn #endif 21447d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 21517359960SJose E. Roman } 2169566063dSJacob Faibussowitsch PetscCall(MatDenseSetLDA(a->A, lda)); 2173ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 218ad16ce7aSStefano Zampini } 219ad16ce7aSStefano Zampini 220d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArray_MPIDense(Mat A, PetscScalar **array) 221d71ae5a4SJacob Faibussowitsch { 222ff14e315SSatish Balay Mat_MPIDense *a = (Mat_MPIDense *)A->data; 223ff14e315SSatish Balay 2243a40ed3dSBarry Smith PetscFunctionBegin; 22528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2269566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, array)); 2273ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 228ff14e315SSatish Balay } 229ff14e315SSatish Balay 230f1e99121SPierre Jolivet static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A, PetscScalar **array) 231d71ae5a4SJacob Faibussowitsch { 2328572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2338572280aSBarry Smith 2348572280aSBarry Smith PetscFunctionBegin; 23528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 236f1e99121SPierre Jolivet PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)array)); 2373ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2388572280aSBarry Smith } 2398572280aSBarry Smith 240d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A, PetscScalar **array) 241d71ae5a4SJacob Faibussowitsch { 2426947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 2436947451fSStefano Zampini 2446947451fSStefano Zampini PetscFunctionBegin; 24528b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2469566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, array)); 2473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2486947451fSStefano Zampini } 2496947451fSStefano Zampini 250d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A, const PetscScalar *array) 251d71ae5a4SJacob Faibussowitsch { 252d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 253d3042a70SBarry Smith 254d3042a70SBarry Smith PetscFunctionBegin; 25528b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 25628b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2579566063dSJacob Faibussowitsch PetscCall(MatDensePlaceArray(a->A, array)); 2583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 259d3042a70SBarry Smith } 260d3042a70SBarry Smith 261d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseResetArray_MPIDense(Mat A) 262d71ae5a4SJacob Faibussowitsch { 263d3042a70SBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 264d3042a70SBarry Smith 265d3042a70SBarry Smith PetscFunctionBegin; 26628b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 26728b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2689566063dSJacob Faibussowitsch PetscCall(MatDenseResetArray(a->A)); 2693ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 270d3042a70SBarry Smith } 271d3042a70SBarry Smith 272d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A, const PetscScalar *array) 273d71ae5a4SJacob Faibussowitsch { 274d5ea218eSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 275d5ea218eSStefano Zampini 276d5ea218eSStefano Zampini PetscFunctionBegin; 27728b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 27828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 2799566063dSJacob Faibussowitsch PetscCall(MatDenseReplaceArray(a->A, array)); 2803ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 281d5ea218eSStefano Zampini } 282d5ea218eSStefano Zampini 283d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A, IS isrow, IS iscol, MatReuse scall, Mat *B) 284d71ae5a4SJacob Faibussowitsch { 285ca3fa75bSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data, *newmatd; 286637a0070SStefano Zampini PetscInt lda, i, j, rstart, rend, nrows, ncols, Ncols, nlrows, nlcols; 2875d0c19d7SBarry Smith const PetscInt *irow, *icol; 288637a0070SStefano Zampini const PetscScalar *v; 289637a0070SStefano Zampini PetscScalar *bv; 290ca3fa75bSLois Curfman McInnes Mat newmat; 2914aa3045dSJed Brown IS iscol_local; 29242a884f0SBarry Smith MPI_Comm comm_is, comm_mat; 293ca3fa75bSLois Curfman McInnes 294ca3fa75bSLois Curfman McInnes PetscFunctionBegin; 2959566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm_mat)); 2969566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)iscol, &comm_is)); 29708401ef6SPierre Jolivet PetscCheck(comm_mat == comm_is, PETSC_COMM_SELF, PETSC_ERR_ARG_NOTSAMECOMM, "IS communicator must match matrix communicator"); 29842a884f0SBarry Smith 2999566063dSJacob Faibussowitsch PetscCall(ISAllGather(iscol, &iscol_local)); 3009566063dSJacob Faibussowitsch PetscCall(ISGetIndices(isrow, &irow)); 3019566063dSJacob Faibussowitsch PetscCall(ISGetIndices(iscol_local, &icol)); 3029566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(isrow, &nrows)); 3039566063dSJacob Faibussowitsch PetscCall(ISGetLocalSize(iscol, &ncols)); 3049566063dSJacob Faibussowitsch PetscCall(ISGetSize(iscol, &Ncols)); /* global number of columns, size of iscol_local */ 305ca3fa75bSLois Curfman McInnes 306ca3fa75bSLois Curfman McInnes /* No parallel redistribution currently supported! Should really check each index set 307da81f932SPierre Jolivet to confirm that it is OK. ... Currently supports only submatrix same partitioning as 3087eba5e9cSLois Curfman McInnes original matrix! */ 309ca3fa75bSLois Curfman McInnes 3109566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &nlrows, &nlcols)); 3119566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRange(A, &rstart, &rend)); 312ca3fa75bSLois Curfman McInnes 313ca3fa75bSLois Curfman McInnes /* Check submatrix call */ 314ca3fa75bSLois Curfman McInnes if (scall == MAT_REUSE_MATRIX) { 315e32f2f54SBarry Smith /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */ 3167eba5e9cSLois Curfman McInnes /* Really need to test rows and column sizes! */ 317ca3fa75bSLois Curfman McInnes newmat = *B; 318ca3fa75bSLois Curfman McInnes } else { 319ca3fa75bSLois Curfman McInnes /* Create and fill new matrix */ 3209566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &newmat)); 3219566063dSJacob Faibussowitsch PetscCall(MatSetSizes(newmat, nrows, ncols, PETSC_DECIDE, Ncols)); 3229566063dSJacob Faibussowitsch PetscCall(MatSetType(newmat, ((PetscObject)A)->type_name)); 3239566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(newmat, NULL)); 324ca3fa75bSLois Curfman McInnes } 325ca3fa75bSLois Curfman McInnes 326ca3fa75bSLois Curfman McInnes /* Now extract the data pointers and do the copy, column at a time */ 327ca3fa75bSLois Curfman McInnes newmatd = (Mat_MPIDense *)newmat->data; 3289566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(newmatd->A, &bv)); 3299566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mat->A, &v)); 3309566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mat->A, &lda)); 3314aa3045dSJed Brown for (i = 0; i < Ncols; i++) { 332637a0070SStefano Zampini const PetscScalar *av = v + lda * icol[i]; 333ad540459SPierre Jolivet for (j = 0; j < nrows; j++) *bv++ = av[irow[j] - rstart]; 334ca3fa75bSLois Curfman McInnes } 3359566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mat->A, &v)); 3369566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(newmatd->A, &bv)); 337ca3fa75bSLois Curfman McInnes 338ca3fa75bSLois Curfman McInnes /* Assemble the matrices so that the correct flags are set */ 3399566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(newmat, MAT_FINAL_ASSEMBLY)); 3409566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(newmat, MAT_FINAL_ASSEMBLY)); 341ca3fa75bSLois Curfman McInnes 342ca3fa75bSLois Curfman McInnes /* Free work space */ 3439566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(isrow, &irow)); 3449566063dSJacob Faibussowitsch PetscCall(ISRestoreIndices(iscol_local, &icol)); 3459566063dSJacob Faibussowitsch PetscCall(ISDestroy(&iscol_local)); 346ca3fa75bSLois Curfman McInnes *B = newmat; 3473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 348ca3fa75bSLois Curfman McInnes } 349ca3fa75bSLois Curfman McInnes 35066976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A, PetscScalar **array) 351d71ae5a4SJacob Faibussowitsch { 35273a71a0fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 35373a71a0fSBarry Smith 3543a40ed3dSBarry Smith PetscFunctionBegin; 3559566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, array)); 3563ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 357ff14e315SSatish Balay } 358ff14e315SSatish Balay 359f1e99121SPierre Jolivet static PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A, PetscScalar **array) 360d71ae5a4SJacob Faibussowitsch { 3618572280aSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3628572280aSBarry Smith 3638572280aSBarry Smith PetscFunctionBegin; 364f1e99121SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)array)); 3653ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3668572280aSBarry Smith } 3678572280aSBarry Smith 36866976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A, PetscScalar **array) 369d71ae5a4SJacob Faibussowitsch { 3706947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 3716947451fSStefano Zampini 3726947451fSStefano Zampini PetscFunctionBegin; 3739566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, array)); 3743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3756947451fSStefano Zampini } 3766947451fSStefano Zampini 37766976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat, MatAssemblyType mode) 378d71ae5a4SJacob Faibussowitsch { 37939ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 38013f74950SBarry Smith PetscInt nstash, reallocs; 3818965ea79SLois Curfman McInnes 3823a40ed3dSBarry Smith PetscFunctionBegin; 3833ba16761SJacob Faibussowitsch if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(PETSC_SUCCESS); 3848965ea79SLois Curfman McInnes 3859566063dSJacob Faibussowitsch PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); 3869566063dSJacob Faibussowitsch PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); 3879566063dSJacob Faibussowitsch PetscCall(PetscInfo(mdn->A, "Stash has %" PetscInt_FMT " entries, uses %" PetscInt_FMT " mallocs.\n", nstash, reallocs)); 3883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 3898965ea79SLois Curfman McInnes } 3908965ea79SLois Curfman McInnes 39166976f2fSJacob Faibussowitsch static PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat, MatAssemblyType mode) 392d71ae5a4SJacob Faibussowitsch { 39339ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 39413f74950SBarry Smith PetscInt i, *row, *col, flg, j, rstart, ncols; 39513f74950SBarry Smith PetscMPIInt n; 39687828ca2SBarry Smith PetscScalar *val; 3978965ea79SLois Curfman McInnes 3983a40ed3dSBarry Smith PetscFunctionBegin; 399910cf402Sprj- if (!mdn->donotstash && !mat->nooffprocentries) { 4008965ea79SLois Curfman McInnes /* wait on receives */ 4017ef1d9bdSSatish Balay while (1) { 4029566063dSJacob Faibussowitsch PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); 4037ef1d9bdSSatish Balay if (!flg) break; 4048965ea79SLois Curfman McInnes 4057ef1d9bdSSatish Balay for (i = 0; i < n;) { 4067ef1d9bdSSatish Balay /* Now identify the consecutive vals belonging to the same row */ 4072205254eSKarl Rupp for (j = i, rstart = row[j]; j < n; j++) { 4082205254eSKarl Rupp if (row[j] != rstart) break; 4092205254eSKarl Rupp } 4107ef1d9bdSSatish Balay if (j < n) ncols = j - i; 4117ef1d9bdSSatish Balay else ncols = n - i; 4127ef1d9bdSSatish Balay /* Now assemble all these values with a single function call */ 4139566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(mat, 1, row + i, ncols, col + i, val + i, mat->insertmode)); 4147ef1d9bdSSatish Balay i = j; 4158965ea79SLois Curfman McInnes } 4167ef1d9bdSSatish Balay } 4179566063dSJacob Faibussowitsch PetscCall(MatStashScatterEnd_Private(&mat->stash)); 418910cf402Sprj- } 4198965ea79SLois Curfman McInnes 4209566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mdn->A, mode)); 4219566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mdn->A, mode)); 4223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4238965ea79SLois Curfman McInnes } 4248965ea79SLois Curfman McInnes 42566976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroEntries_MPIDense(Mat A) 426d71ae5a4SJacob Faibussowitsch { 42739ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 4283a40ed3dSBarry Smith 4293a40ed3dSBarry Smith PetscFunctionBegin; 4309566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(l->A)); 4313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4328965ea79SLois Curfman McInnes } 4338965ea79SLois Curfman McInnes 43466976f2fSJacob Faibussowitsch static PetscErrorCode MatZeroRows_MPIDense(Mat A, PetscInt n, const PetscInt rows[], PetscScalar diag, Vec x, Vec b) 435d71ae5a4SJacob Faibussowitsch { 43639ddd567SLois Curfman McInnes Mat_MPIDense *l = (Mat_MPIDense *)A->data; 437637a0070SStefano Zampini PetscInt i, len, *lrows; 438637a0070SStefano Zampini 439637a0070SStefano Zampini PetscFunctionBegin; 440637a0070SStefano Zampini /* get locally owned rows */ 4419566063dSJacob Faibussowitsch PetscCall(PetscLayoutMapLocal(A->rmap, n, rows, &len, &lrows, NULL)); 442637a0070SStefano Zampini /* fix right hand side if needed */ 443637a0070SStefano Zampini if (x && b) { 44497b48c8fSBarry Smith const PetscScalar *xx; 44597b48c8fSBarry Smith PetscScalar *bb; 4468965ea79SLois Curfman McInnes 4479566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(x, &xx)); 4489566063dSJacob Faibussowitsch PetscCall(VecGetArrayWrite(b, &bb)); 449637a0070SStefano Zampini for (i = 0; i < len; ++i) bb[lrows[i]] = diag * xx[lrows[i]]; 4509566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(x, &xx)); 4519566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayWrite(b, &bb)); 45297b48c8fSBarry Smith } 4539566063dSJacob Faibussowitsch PetscCall(MatZeroRows(l->A, len, lrows, 0.0, NULL, NULL)); 454e2eb51b1SBarry Smith if (diag != 0.0) { 455637a0070SStefano Zampini Vec d; 456b9679d65SBarry Smith 4579566063dSJacob Faibussowitsch PetscCall(MatCreateVecs(A, NULL, &d)); 4589566063dSJacob Faibussowitsch PetscCall(VecSet(d, diag)); 4599566063dSJacob Faibussowitsch PetscCall(MatDiagonalSet(A, d, INSERT_VALUES)); 4609566063dSJacob Faibussowitsch PetscCall(VecDestroy(&d)); 461b9679d65SBarry Smith } 4629566063dSJacob Faibussowitsch PetscCall(PetscFree(lrows)); 4633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4648965ea79SLois Curfman McInnes } 4658965ea79SLois Curfman McInnes 46666976f2fSJacob Faibussowitsch static PetscErrorCode MatMult_MPIDense(Mat mat, Vec xx, Vec yy) 467d71ae5a4SJacob Faibussowitsch { 46839ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 469637a0070SStefano Zampini const PetscScalar *ax; 470637a0070SStefano Zampini PetscScalar *ay; 471d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 472c456f294SBarry Smith 4733a40ed3dSBarry Smith PetscFunctionBegin; 4746f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 4759566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 4769566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 4779566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 4789566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 4799566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 4809566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 4819566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->mult)(mdn->A, mdn->lvec, yy)); 4823ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 4838965ea79SLois Curfman McInnes } 4848965ea79SLois Curfman McInnes 48566976f2fSJacob Faibussowitsch static PetscErrorCode MatMultAdd_MPIDense(Mat mat, Vec xx, Vec yy, Vec zz) 486d71ae5a4SJacob Faibussowitsch { 48739ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 488637a0070SStefano Zampini const PetscScalar *ax; 489637a0070SStefano Zampini PetscScalar *ay; 490d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 491c456f294SBarry Smith 4923a40ed3dSBarry Smith PetscFunctionBegin; 4936f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(mat)); 4949566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(xx, &ax, &axmtype)); 4959566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(mdn->lvec, &ay, &aymtype)); 4969566063dSJacob Faibussowitsch PetscCall(PetscSFBcastWithMemTypeBegin(mdn->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPI_REPLACE)); 4979566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ax, ay, MPI_REPLACE)); 4989566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(mdn->lvec, &ay)); 4999566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(xx, &ax)); 5009566063dSJacob Faibussowitsch PetscCall((*mdn->A->ops->multadd)(mdn->A, mdn->lvec, yy, zz)); 5013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5028965ea79SLois Curfman McInnes } 5038965ea79SLois Curfman McInnes 504459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeKernel_MPIDense(Mat A, Vec xx, Vec yy, PetscBool herm) 505d71ae5a4SJacob Faibussowitsch { 506096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 507637a0070SStefano Zampini const PetscScalar *ax; 508637a0070SStefano Zampini PetscScalar *ay; 509d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 5103a40ed3dSBarry Smith PetscFunctionBegin; 5116f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 5129566063dSJacob Faibussowitsch PetscCall(VecSet(yy, 0.0)); 513459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 514459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 5159566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5169566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(yy, &ay, &aymtype)); 5179566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5189566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5199566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5209566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(yy, &ay)); 5213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 522096963f5SLois Curfman McInnes } 523096963f5SLois Curfman McInnes 524459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAddKernel_MPIDense(Mat A, Vec xx, Vec yy, Vec zz, PetscBool herm) 525d71ae5a4SJacob Faibussowitsch { 526096963f5SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 527637a0070SStefano Zampini const PetscScalar *ax; 528637a0070SStefano Zampini PetscScalar *ay; 529d0295fc0SJunchao Zhang PetscMemType axmtype, aymtype; 530096963f5SLois Curfman McInnes 5313a40ed3dSBarry Smith PetscFunctionBegin; 5326f08ad05SPierre Jolivet if (!a->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 5339566063dSJacob Faibussowitsch PetscCall(VecCopy(yy, zz)); 534459e8d23SBlanca Mellado Pinto if (herm) PetscCall((*a->A->ops->multhermitiantranspose)(a->A, xx, a->lvec)); 535459e8d23SBlanca Mellado Pinto else PetscCall((*a->A->ops->multtranspose)(a->A, xx, a->lvec)); 5369566063dSJacob Faibussowitsch PetscCall(VecGetArrayReadAndMemType(a->lvec, &ax, &axmtype)); 5379566063dSJacob Faibussowitsch PetscCall(VecGetArrayAndMemType(zz, &ay, &aymtype)); 5389566063dSJacob Faibussowitsch PetscCall(PetscSFReduceWithMemTypeBegin(a->Mvctx, MPIU_SCALAR, axmtype, ax, aymtype, ay, MPIU_SUM)); 5399566063dSJacob Faibussowitsch PetscCall(PetscSFReduceEnd(a->Mvctx, MPIU_SCALAR, ax, ay, MPIU_SUM)); 5409566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayReadAndMemType(a->lvec, &ax)); 5419566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayAndMemType(zz, &ay)); 5423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 543096963f5SLois Curfman McInnes } 544096963f5SLois Curfman McInnes 545459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTranspose_MPIDense(Mat A, Vec xx, Vec yy) 546459e8d23SBlanca Mellado Pinto { 547459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 548459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_FALSE)); 549459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 550459e8d23SBlanca Mellado Pinto } 551459e8d23SBlanca Mellado Pinto 552459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 553459e8d23SBlanca Mellado Pinto { 554459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 555459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_FALSE)); 556459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 557459e8d23SBlanca Mellado Pinto } 558459e8d23SBlanca Mellado Pinto 559459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTranspose_MPIDense(Mat A, Vec xx, Vec yy) 560459e8d23SBlanca Mellado Pinto { 561459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 562459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeKernel_MPIDense(A, xx, yy, PETSC_TRUE)); 563459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 564459e8d23SBlanca Mellado Pinto } 565459e8d23SBlanca Mellado Pinto 566459e8d23SBlanca Mellado Pinto static PetscErrorCode MatMultHermitianTransposeAdd_MPIDense(Mat A, Vec xx, Vec yy, Vec zz) 567459e8d23SBlanca Mellado Pinto { 568459e8d23SBlanca Mellado Pinto PetscFunctionBegin; 569459e8d23SBlanca Mellado Pinto PetscCall(MatMultTransposeAddKernel_MPIDense(A, xx, yy, zz, PETSC_TRUE)); 570459e8d23SBlanca Mellado Pinto PetscFunctionReturn(PETSC_SUCCESS); 571459e8d23SBlanca Mellado Pinto } 572459e8d23SBlanca Mellado Pinto 573d71ae5a4SJacob Faibussowitsch PetscErrorCode MatGetDiagonal_MPIDense(Mat A, Vec v) 574d71ae5a4SJacob Faibussowitsch { 57539ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 57679560b15SJacob Faibussowitsch PetscInt lda, len, i, nl, ng, m = A->rmap->n, radd; 57779560b15SJacob Faibussowitsch PetscScalar *x; 578637a0070SStefano Zampini const PetscScalar *av; 579ed3cc1f0SBarry Smith 5803a40ed3dSBarry Smith PetscFunctionBegin; 5819566063dSJacob Faibussowitsch PetscCall(VecGetArray(v, &x)); 58279560b15SJacob Faibussowitsch PetscCall(VecGetSize(v, &ng)); 58379560b15SJacob Faibussowitsch PetscCheck(ng == A->rmap->N, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Nonconforming mat and vec"); 58479560b15SJacob Faibussowitsch PetscCall(VecGetLocalSize(v, &nl)); 585d0f46423SBarry Smith len = PetscMin(a->A->rmap->n, a->A->cmap->n); 586d0f46423SBarry Smith radd = A->rmap->rstart * m; 5879566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 5889566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 589ad540459SPierre Jolivet for (i = 0; i < len; i++) x[i] = av[radd + i * lda + i]; 5909566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 59179560b15SJacob Faibussowitsch PetscCall(PetscArrayzero(x + i, nl - i)); 5929566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(v, &x)); 5933ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 5948965ea79SLois Curfman McInnes } 5958965ea79SLois Curfman McInnes 59666976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MPIDense(Mat mat) 597d71ae5a4SJacob Faibussowitsch { 5983501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 599ed3cc1f0SBarry Smith 6003a40ed3dSBarry Smith PetscFunctionBegin; 6013ba16761SJacob Faibussowitsch PetscCall(PetscLogObjectState((PetscObject)mat, "Rows=%" PetscInt_FMT ", Cols=%" PetscInt_FMT, mat->rmap->N, mat->cmap->N)); 6029566063dSJacob Faibussowitsch PetscCall(MatStashDestroy_Private(&mat->stash)); 60328b400f6SJacob Faibussowitsch PetscCheck(!mdn->vecinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 60428b400f6SJacob Faibussowitsch PetscCheck(!mdn->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 6059566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->A)); 6069566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->lvec)); 6079566063dSJacob Faibussowitsch PetscCall(PetscSFDestroy(&mdn->Mvctx)); 6089566063dSJacob Faibussowitsch PetscCall(VecDestroy(&mdn->cvec)); 6099566063dSJacob Faibussowitsch PetscCall(MatDestroy(&mdn->cmat)); 61001b82886SBarry Smith 6119566063dSJacob Faibussowitsch PetscCall(PetscFree(mat->data)); 6129566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, NULL)); 6138baccfbdSHong Zhang 6149566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", NULL)); 6159566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", NULL)); 6169566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", NULL)); 6179566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", NULL)); 6189566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", NULL)); 6199566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", NULL)); 6209566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", NULL)); 6219566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", NULL)); 6229566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", NULL)); 6239566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", NULL)); 6249566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", NULL)); 6259566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", NULL)); 6269566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", NULL)); 6278baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 6289566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", NULL)); 6298baccfbdSHong Zhang #endif 630d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 6319566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", NULL)); 632d24d4204SJose E. Roman #endif 6339566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", NULL)); 6349566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", NULL)); 6359566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", NULL)); 6366718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 6379566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", NULL)); 6389566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", NULL)); 6392e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", NULL)); 6402e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensecuda_mpidense_C", NULL)); 6412e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensecuda_C", NULL)); 6422e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C", NULL)); 6432e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaij_C", NULL)); 6442e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C", NULL)); 6452e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArray_C", NULL)); 6462e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayRead_C", NULL)); 6472e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAGetArrayWrite_C", NULL)); 6482e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArray_C", NULL)); 6492e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayRead_C", NULL)); 6502e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDARestoreArrayWrite_C", NULL)); 6512e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAPlaceArray_C", NULL)); 6522e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAResetArray_C", NULL)); 6532e956fe4SStefano Zampini PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDAReplaceArray_C", NULL)); 6543d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseCUDASetPreallocation_C", NULL)); 6556718818eSStefano Zampini #endif 65647d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 65747d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", NULL)); 65847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", NULL)); 65947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", NULL)); 66047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidensehip_mpidense_C", NULL)); 66147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidensehip_C", NULL)); 66247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidensehip_C", NULL)); 66347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaij_C", NULL)); 66447d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidensehip_mpiaijhipsparse_C", NULL)); 66547d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArray_C", NULL)); 66647d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayRead_C", NULL)); 66747d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPGetArrayWrite_C", NULL)); 66847d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArray_C", NULL)); 66947d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayRead_C", NULL)); 67047d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPRestoreArrayWrite_C", NULL)); 67147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPPlaceArray_C", NULL)); 67247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPResetArray_C", NULL)); 67347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPReplaceArray_C", NULL)); 6743d9668e3SJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseHIPSetPreallocation_C", NULL)); 67547d993e7Ssuyashtn #endif 6769566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", NULL)); 6779566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", NULL)); 6789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", NULL)); 6799566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", NULL)); 6809566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", NULL)); 6819566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", NULL)); 6829566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", NULL)); 6839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", NULL)); 6849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", NULL)); 6859566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", NULL)); 686f8103e6bSStefano Zampini 687f8103e6bSStefano Zampini PetscCall(PetscObjectCompose((PetscObject)mat, "DiagonalBlock", NULL)); 6883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 6898965ea79SLois Curfman McInnes } 69039ddd567SLois Curfman McInnes 6919804daf3SBarry Smith #include <petscdraw.h> 692d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat, PetscViewer viewer) 693d71ae5a4SJacob Faibussowitsch { 69439ddd567SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)mat->data; 695616b8fbbSStefano Zampini PetscMPIInt rank; 69619fd82e9SBarry Smith PetscViewerType vtype; 697ace3abfcSBarry Smith PetscBool iascii, isdraw; 698b0a32e0cSBarry Smith PetscViewer sviewer; 699f3ef73ceSBarry Smith PetscViewerFormat format; 7008965ea79SLois Curfman McInnes 7013a40ed3dSBarry Smith PetscFunctionBegin; 7029566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(PetscObjectComm((PetscObject)mat), &rank)); 7039566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 7049566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 70532077d6dSBarry Smith if (iascii) { 7069566063dSJacob Faibussowitsch PetscCall(PetscViewerGetType(viewer, &vtype)); 7079566063dSJacob Faibussowitsch PetscCall(PetscViewerGetFormat(viewer, &format)); 708456192e2SBarry Smith if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) { 7094e220ebcSLois Curfman McInnes MatInfo info; 7109566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mat, MAT_LOCAL, &info)); 7119566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPushSynchronized(viewer)); 7129371c9d4SSatish Balay PetscCall(PetscViewerASCIISynchronizedPrintf(viewer, " [%d] local rows %" PetscInt_FMT " nz %" PetscInt_FMT " nz alloced %" PetscInt_FMT " mem %" PetscInt_FMT " \n", rank, mat->rmap->n, (PetscInt)info.nz_used, (PetscInt)info.nz_allocated, 7139371c9d4SSatish Balay (PetscInt)info.memory)); 7149566063dSJacob Faibussowitsch PetscCall(PetscViewerFlush(viewer)); 7159566063dSJacob Faibussowitsch PetscCall(PetscViewerASCIIPopSynchronized(viewer)); 7166f08ad05SPierre Jolivet if (mdn->Mvctx) PetscCall(PetscSFView(mdn->Mvctx, viewer)); 7173ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 718fb9695e5SSatish Balay } else if (format == PETSC_VIEWER_ASCII_INFO) { 7193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7208965ea79SLois Curfman McInnes } 721f1af5d2fSBarry Smith } else if (isdraw) { 722b0a32e0cSBarry Smith PetscDraw draw; 723ace3abfcSBarry Smith PetscBool isnull; 724f1af5d2fSBarry Smith 7259566063dSJacob Faibussowitsch PetscCall(PetscViewerDrawGetDraw(viewer, 0, &draw)); 7269566063dSJacob Faibussowitsch PetscCall(PetscDrawIsNull(draw, &isnull)); 7273ba16761SJacob Faibussowitsch if (isnull) PetscFunctionReturn(PETSC_SUCCESS); 728f1af5d2fSBarry Smith } 72977ed5343SBarry Smith 7307da1fb6eSBarry Smith { 7318965ea79SLois Curfman McInnes /* assemble the entire matrix onto first processor. */ 7328965ea79SLois Curfman McInnes Mat A; 733d0f46423SBarry Smith PetscInt M = mat->rmap->N, N = mat->cmap->N, m, row, i, nz; 734ba8c8a56SBarry Smith PetscInt *cols; 735ba8c8a56SBarry Smith PetscScalar *vals; 7368965ea79SLois Curfman McInnes 7379566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)mat), &A)); 738dd400576SPatrick Sanan if (rank == 0) { 7399566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, M, N, M, N)); 7403a40ed3dSBarry Smith } else { 7419566063dSJacob Faibussowitsch PetscCall(MatSetSizes(A, 0, 0, M, N)); 7428965ea79SLois Curfman McInnes } 7437adad957SLisandro Dalcin /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */ 7449566063dSJacob Faibussowitsch PetscCall(MatSetType(A, MATMPIDENSE)); 7459566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 7468965ea79SLois Curfman McInnes 74739ddd567SLois Curfman McInnes /* Copy the matrix ... This isn't the most efficient means, 74839ddd567SLois Curfman McInnes but it's quick for now */ 74951022da4SBarry Smith A->insertmode = INSERT_VALUES; 7502205254eSKarl Rupp 7512205254eSKarl Rupp row = mat->rmap->rstart; 7522205254eSKarl Rupp m = mdn->A->rmap->n; 7538965ea79SLois Curfman McInnes for (i = 0; i < m; i++) { 7549566063dSJacob Faibussowitsch PetscCall(MatGetRow_MPIDense(mat, row, &nz, &cols, &vals)); 7559566063dSJacob Faibussowitsch PetscCall(MatSetValues_MPIDense(A, 1, &row, nz, cols, vals, INSERT_VALUES)); 7569566063dSJacob Faibussowitsch PetscCall(MatRestoreRow_MPIDense(mat, row, &nz, &cols, &vals)); 75739ddd567SLois Curfman McInnes row++; 7588965ea79SLois Curfman McInnes } 7598965ea79SLois Curfman McInnes 7609566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(A, MAT_FINAL_ASSEMBLY)); 7619566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(A, MAT_FINAL_ASSEMBLY)); 7629566063dSJacob Faibussowitsch PetscCall(PetscViewerGetSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 763dd400576SPatrick Sanan if (rank == 0) { 7649566063dSJacob Faibussowitsch PetscCall(PetscObjectSetName((PetscObject)((Mat_MPIDense *)(A->data))->A, ((PetscObject)mat)->name)); 7659566063dSJacob Faibussowitsch PetscCall(MatView_SeqDense(((Mat_MPIDense *)(A->data))->A, sviewer)); 7668965ea79SLois Curfman McInnes } 7679566063dSJacob Faibussowitsch PetscCall(PetscViewerRestoreSubViewer(viewer, PETSC_COMM_SELF, &sviewer)); 7689566063dSJacob Faibussowitsch PetscCall(MatDestroy(&A)); 7698965ea79SLois Curfman McInnes } 7703ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7718965ea79SLois Curfman McInnes } 7728965ea79SLois Curfman McInnes 77366976f2fSJacob Faibussowitsch static PetscErrorCode MatView_MPIDense(Mat mat, PetscViewer viewer) 774d71ae5a4SJacob Faibussowitsch { 775ace3abfcSBarry Smith PetscBool iascii, isbinary, isdraw, issocket; 7768965ea79SLois Curfman McInnes 777433994e6SBarry Smith PetscFunctionBegin; 7789566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERASCII, &iascii)); 7799566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 7809566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERSOCKET, &issocket)); 7819566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERDRAW, &isdraw)); 7820f5bd95cSBarry Smith 78332077d6dSBarry Smith if (iascii || issocket || isdraw) { 7849566063dSJacob Faibussowitsch PetscCall(MatView_MPIDense_ASCIIorDraworSocket(mat, viewer)); 7851baa6e33SBarry Smith } else if (isbinary) PetscCall(MatView_Dense_Binary(mat, viewer)); 7863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 7878965ea79SLois Curfman McInnes } 7888965ea79SLois Curfman McInnes 78966976f2fSJacob Faibussowitsch static PetscErrorCode MatGetInfo_MPIDense(Mat A, MatInfoType flag, MatInfo *info) 790d71ae5a4SJacob Faibussowitsch { 7913501a2bdSLois Curfman McInnes Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 7923501a2bdSLois Curfman McInnes Mat mdn = mat->A; 7933966268fSBarry Smith PetscLogDouble isend[5], irecv[5]; 7948965ea79SLois Curfman McInnes 7953a40ed3dSBarry Smith PetscFunctionBegin; 7964e220ebcSLois Curfman McInnes info->block_size = 1.0; 7972205254eSKarl Rupp 7989566063dSJacob Faibussowitsch PetscCall(MatGetInfo(mdn, MAT_LOCAL, info)); 7992205254eSKarl Rupp 8009371c9d4SSatish Balay isend[0] = info->nz_used; 8019371c9d4SSatish Balay isend[1] = info->nz_allocated; 8029371c9d4SSatish Balay isend[2] = info->nz_unneeded; 8039371c9d4SSatish Balay isend[3] = info->memory; 8049371c9d4SSatish Balay isend[4] = info->mallocs; 8058965ea79SLois Curfman McInnes if (flag == MAT_LOCAL) { 8064e220ebcSLois Curfman McInnes info->nz_used = isend[0]; 8074e220ebcSLois Curfman McInnes info->nz_allocated = isend[1]; 8084e220ebcSLois Curfman McInnes info->nz_unneeded = isend[2]; 8094e220ebcSLois Curfman McInnes info->memory = isend[3]; 8104e220ebcSLois Curfman McInnes info->mallocs = isend[4]; 8118965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_MAX) { 8121c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_MAX, PetscObjectComm((PetscObject)A))); 8132205254eSKarl Rupp 8144e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 8154e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 8164e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 8174e220ebcSLois Curfman McInnes info->memory = irecv[3]; 8184e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 8198965ea79SLois Curfman McInnes } else if (flag == MAT_GLOBAL_SUM) { 8201c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(isend, irecv, 5, MPIU_PETSCLOGDOUBLE, MPI_SUM, PetscObjectComm((PetscObject)A))); 8212205254eSKarl Rupp 8224e220ebcSLois Curfman McInnes info->nz_used = irecv[0]; 8234e220ebcSLois Curfman McInnes info->nz_allocated = irecv[1]; 8244e220ebcSLois Curfman McInnes info->nz_unneeded = irecv[2]; 8254e220ebcSLois Curfman McInnes info->memory = irecv[3]; 8264e220ebcSLois Curfman McInnes info->mallocs = irecv[4]; 8278965ea79SLois Curfman McInnes } 8284e220ebcSLois Curfman McInnes info->fill_ratio_given = 0; /* no parallel LU/ILU/Cholesky */ 8294e220ebcSLois Curfman McInnes info->fill_ratio_needed = 0; 8304e220ebcSLois Curfman McInnes info->factor_mallocs = 0; 8313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8328965ea79SLois Curfman McInnes } 8338965ea79SLois Curfman McInnes 83466976f2fSJacob Faibussowitsch static PetscErrorCode MatSetOption_MPIDense(Mat A, MatOption op, PetscBool flg) 835d71ae5a4SJacob Faibussowitsch { 83639ddd567SLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 8378965ea79SLois Curfman McInnes 8383a40ed3dSBarry Smith PetscFunctionBegin; 83912c028f9SKris Buschelman switch (op) { 840512a5fc5SBarry Smith case MAT_NEW_NONZERO_LOCATIONS: 84112c028f9SKris Buschelman case MAT_NEW_NONZERO_LOCATION_ERR: 84212c028f9SKris Buschelman case MAT_NEW_NONZERO_ALLOCATION_ERR: 84343674050SBarry Smith MatCheckPreallocated(A, 1); 8449566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 84512c028f9SKris Buschelman break; 84612c028f9SKris Buschelman case MAT_ROW_ORIENTED: 84743674050SBarry Smith MatCheckPreallocated(A, 1); 8484e0d8c25SBarry Smith a->roworiented = flg; 8499566063dSJacob Faibussowitsch PetscCall(MatSetOption(a->A, op, flg)); 85012c028f9SKris Buschelman break; 8518c78258cSHong Zhang case MAT_FORCE_DIAGONAL_ENTRIES: 85213fa8e87SLisandro Dalcin case MAT_KEEP_NONZERO_PATTERN: 85312c028f9SKris Buschelman case MAT_USE_HASH_TABLE: 854d71ae5a4SJacob Faibussowitsch case MAT_SORTED_FULL: 855d71ae5a4SJacob Faibussowitsch PetscCall(PetscInfo(A, "Option %s ignored\n", MatOptions[op])); 856d71ae5a4SJacob Faibussowitsch break; 857d71ae5a4SJacob Faibussowitsch case MAT_IGNORE_OFF_PROC_ENTRIES: 858d71ae5a4SJacob Faibussowitsch a->donotstash = flg; 859d71ae5a4SJacob Faibussowitsch break; 86077e54ba9SKris Buschelman case MAT_SYMMETRIC: 86177e54ba9SKris Buschelman case MAT_STRUCTURALLY_SYMMETRIC: 8629a4540c5SBarry Smith case MAT_HERMITIAN: 8639a4540c5SBarry Smith case MAT_SYMMETRY_ETERNAL: 864b94d7dedSBarry Smith case MAT_STRUCTURAL_SYMMETRY_ETERNAL: 865b94d7dedSBarry Smith case MAT_SPD: 866600fe468SBarry Smith case MAT_IGNORE_LOWER_TRIANGULAR: 8675d7aebe8SStefano Zampini case MAT_IGNORE_ZERO_ENTRIES: 868b94d7dedSBarry Smith case MAT_SPD_ETERNAL: 869b94d7dedSBarry Smith /* if the diagonal matrix is square it inherits some of the properties above */ 8709566063dSJacob Faibussowitsch PetscCall(PetscInfo(A, "Option %s ignored\n", MatOptions[op])); 87177e54ba9SKris Buschelman break; 872d71ae5a4SJacob Faibussowitsch default: 873d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "unknown option %s", MatOptions[op]); 8743a40ed3dSBarry Smith } 8753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 8768965ea79SLois Curfman McInnes } 8778965ea79SLois Curfman McInnes 87866976f2fSJacob Faibussowitsch static PetscErrorCode MatDiagonalScale_MPIDense(Mat A, Vec ll, Vec rr) 879d71ae5a4SJacob Faibussowitsch { 8805b2fa520SLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 881637a0070SStefano Zampini const PetscScalar *l; 882637a0070SStefano Zampini PetscScalar x, *v, *vv, *r; 883637a0070SStefano Zampini PetscInt i, j, s2a, s3a, s2, s3, m = mdn->A->rmap->n, n = mdn->A->cmap->n, lda; 8845b2fa520SLois Curfman McInnes 8855b2fa520SLois Curfman McInnes PetscFunctionBegin; 8869566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(mdn->A, &vv)); 8879566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(mdn->A, &lda)); 8889566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(A, &s2, &s3)); 8895b2fa520SLois Curfman McInnes if (ll) { 8909566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(ll, &s2a)); 89108401ef6SPierre Jolivet PetscCheck(s2a == s2, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Left scaling vector non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT, s2a, s2); 8929566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(ll, &l)); 8935b2fa520SLois Curfman McInnes for (i = 0; i < m; i++) { 8945b2fa520SLois Curfman McInnes x = l[i]; 895637a0070SStefano Zampini v = vv + i; 8969371c9d4SSatish Balay for (j = 0; j < n; j++) { 8979371c9d4SSatish Balay (*v) *= x; 8989371c9d4SSatish Balay v += lda; 8999371c9d4SSatish Balay } 9005b2fa520SLois Curfman McInnes } 9019566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(ll, &l)); 9029566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 9035b2fa520SLois Curfman McInnes } 9045b2fa520SLois Curfman McInnes if (rr) { 905637a0070SStefano Zampini const PetscScalar *ar; 906637a0070SStefano Zampini 9079566063dSJacob Faibussowitsch PetscCall(VecGetLocalSize(rr, &s3a)); 90808401ef6SPierre Jolivet PetscCheck(s3a == s3, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Right scaling vec non-conforming local size, %" PetscInt_FMT " != %" PetscInt_FMT ".", s3a, s3); 9099566063dSJacob Faibussowitsch PetscCall(VecGetArrayRead(rr, &ar)); 9106f08ad05SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); 9119566063dSJacob Faibussowitsch PetscCall(VecGetArray(mdn->lvec, &r)); 9129566063dSJacob Faibussowitsch PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 9139566063dSJacob Faibussowitsch PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, ar, r, MPI_REPLACE)); 9149566063dSJacob Faibussowitsch PetscCall(VecRestoreArrayRead(rr, &ar)); 9155b2fa520SLois Curfman McInnes for (i = 0; i < n; i++) { 9165b2fa520SLois Curfman McInnes x = r[i]; 917637a0070SStefano Zampini v = vv + i * lda; 9182205254eSKarl Rupp for (j = 0; j < m; j++) (*v++) *= x; 9195b2fa520SLois Curfman McInnes } 9209566063dSJacob Faibussowitsch PetscCall(VecRestoreArray(mdn->lvec, &r)); 9219566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(1.0 * n * m)); 9225b2fa520SLois Curfman McInnes } 9239566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(mdn->A, &vv)); 9243ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9255b2fa520SLois Curfman McInnes } 9265b2fa520SLois Curfman McInnes 92766976f2fSJacob Faibussowitsch static PetscErrorCode MatNorm_MPIDense(Mat A, NormType type, PetscReal *nrm) 928d71ae5a4SJacob Faibussowitsch { 9293501a2bdSLois Curfman McInnes Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 93013f74950SBarry Smith PetscInt i, j; 931616b8fbbSStefano Zampini PetscMPIInt size; 932329f5518SBarry Smith PetscReal sum = 0.0; 933637a0070SStefano Zampini const PetscScalar *av, *v; 9343501a2bdSLois Curfman McInnes 9353a40ed3dSBarry Smith PetscFunctionBegin; 9369566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(mdn->A, &av)); 937637a0070SStefano Zampini v = av; 9389566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 939616b8fbbSStefano Zampini if (size == 1) { 9409566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, nrm)); 9413501a2bdSLois Curfman McInnes } else { 9423501a2bdSLois Curfman McInnes if (type == NORM_FROBENIUS) { 943d0f46423SBarry Smith for (i = 0; i < mdn->A->cmap->n * mdn->A->rmap->n; i++) { 9449371c9d4SSatish Balay sum += PetscRealPart(PetscConj(*v) * (*v)); 9459371c9d4SSatish Balay v++; 9463501a2bdSLois Curfman McInnes } 9471c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&sum, nrm, 1, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 9488f1a2a5eSBarry Smith *nrm = PetscSqrtReal(*nrm); 9499566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(2.0 * mdn->A->cmap->n * mdn->A->rmap->n)); 9503a40ed3dSBarry Smith } else if (type == NORM_1) { 951329f5518SBarry Smith PetscReal *tmp, *tmp2; 9529566063dSJacob Faibussowitsch PetscCall(PetscCalloc2(A->cmap->N, &tmp, A->cmap->N, &tmp2)); 953064f8208SBarry Smith *nrm = 0.0; 954637a0070SStefano Zampini v = av; 955d0f46423SBarry Smith for (j = 0; j < mdn->A->cmap->n; j++) { 956d0f46423SBarry Smith for (i = 0; i < mdn->A->rmap->n; i++) { 9579371c9d4SSatish Balay tmp[j] += PetscAbsScalar(*v); 9589371c9d4SSatish Balay v++; 9593501a2bdSLois Curfman McInnes } 9603501a2bdSLois Curfman McInnes } 9611c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(tmp, tmp2, A->cmap->N, MPIU_REAL, MPIU_SUM, PetscObjectComm((PetscObject)A))); 962d0f46423SBarry Smith for (j = 0; j < A->cmap->N; j++) { 963064f8208SBarry Smith if (tmp2[j] > *nrm) *nrm = tmp2[j]; 9643501a2bdSLois Curfman McInnes } 9659566063dSJacob Faibussowitsch PetscCall(PetscFree2(tmp, tmp2)); 9669566063dSJacob Faibussowitsch PetscCall(PetscLogFlops(A->cmap->n * A->rmap->n)); 9673a40ed3dSBarry Smith } else if (type == NORM_INFINITY) { /* max row norm */ 968329f5518SBarry Smith PetscReal ntemp; 9699566063dSJacob Faibussowitsch PetscCall(MatNorm(mdn->A, type, &ntemp)); 9701c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&ntemp, nrm, 1, MPIU_REAL, MPIU_MAX, PetscObjectComm((PetscObject)A))); 971ce94432eSBarry Smith } else SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "No support for two norm"); 9723501a2bdSLois Curfman McInnes } 9739566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(mdn->A, &av)); 9743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 9753501a2bdSLois Curfman McInnes } 9763501a2bdSLois Curfman McInnes 97766976f2fSJacob Faibussowitsch static PetscErrorCode MatTranspose_MPIDense(Mat A, MatReuse reuse, Mat *matout) 978d71ae5a4SJacob Faibussowitsch { 9793501a2bdSLois Curfman McInnes Mat_MPIDense *a = (Mat_MPIDense *)A->data; 9803501a2bdSLois Curfman McInnes Mat B; 981d0f46423SBarry Smith PetscInt M = A->rmap->N, N = A->cmap->N, m, n, *rwork, rstart = A->rmap->rstart; 982637a0070SStefano Zampini PetscInt j, i, lda; 98387828ca2SBarry Smith PetscScalar *v; 9843501a2bdSLois Curfman McInnes 9853a40ed3dSBarry Smith PetscFunctionBegin; 9867fb60732SBarry Smith if (reuse == MAT_REUSE_MATRIX) PetscCall(MatTransposeCheckNonzeroState_Private(A, *matout)); 987cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) { 9889566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &B)); 9899566063dSJacob Faibussowitsch PetscCall(MatSetSizes(B, A->cmap->n, A->rmap->n, N, M)); 9909566063dSJacob Faibussowitsch PetscCall(MatSetType(B, ((PetscObject)A)->type_name)); 9919566063dSJacob Faibussowitsch PetscCall(MatMPIDenseSetPreallocation(B, NULL)); 992637a0070SStefano Zampini } else B = *matout; 9933501a2bdSLois Curfman McInnes 9949371c9d4SSatish Balay m = a->A->rmap->n; 9959371c9d4SSatish Balay n = a->A->cmap->n; 9969566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, (const PetscScalar **)&v)); 9979566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 9989566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(m, &rwork)); 9993501a2bdSLois Curfman McInnes for (i = 0; i < m; i++) rwork[i] = rstart + i; 10001acff37aSSatish Balay for (j = 0; j < n; j++) { 10019566063dSJacob Faibussowitsch PetscCall(MatSetValues(B, 1, &j, m, rwork, v, INSERT_VALUES)); 10028e3a54c0SPierre Jolivet v = PetscSafePointerPlusOffset(v, lda); 10033501a2bdSLois Curfman McInnes } 10049566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, (const PetscScalar **)&v)); 10059566063dSJacob Faibussowitsch PetscCall(PetscFree(rwork)); 10069566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(B, MAT_FINAL_ASSEMBLY)); 10079566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(B, MAT_FINAL_ASSEMBLY)); 1008cf37664fSBarry Smith if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) { 10093501a2bdSLois Curfman McInnes *matout = B; 10103501a2bdSLois Curfman McInnes } else { 10119566063dSJacob Faibussowitsch PetscCall(MatHeaderMerge(A, &B)); 10123501a2bdSLois Curfman McInnes } 10133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1014096963f5SLois Curfman McInnes } 1015096963f5SLois Curfman McInnes 10166849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat, MatDuplicateOption, Mat *); 101752c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat, PetscScalar); 10188965ea79SLois Curfman McInnes 101966976f2fSJacob Faibussowitsch static PetscErrorCode MatSetUp_MPIDense(Mat A) 1020d71ae5a4SJacob Faibussowitsch { 1021273d9f13SBarry Smith PetscFunctionBegin; 10229566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->rmap)); 10239566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(A->cmap)); 102448a46eb9SPierre Jolivet if (!A->preallocated) PetscCall(MatMPIDenseSetPreallocation(A, NULL)); 10253ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1026273d9f13SBarry Smith } 1027273d9f13SBarry Smith 102866976f2fSJacob Faibussowitsch static PetscErrorCode MatAXPY_MPIDense(Mat Y, PetscScalar alpha, Mat X, MatStructure str) 1029d71ae5a4SJacob Faibussowitsch { 1030488007eeSBarry Smith Mat_MPIDense *A = (Mat_MPIDense *)Y->data, *B = (Mat_MPIDense *)X->data; 1031488007eeSBarry Smith 1032488007eeSBarry Smith PetscFunctionBegin; 10339566063dSJacob Faibussowitsch PetscCall(MatAXPY(A->A, alpha, B->A, str)); 10343ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1035488007eeSBarry Smith } 1036488007eeSBarry Smith 103766976f2fSJacob Faibussowitsch static PetscErrorCode MatConjugate_MPIDense(Mat mat) 1038d71ae5a4SJacob Faibussowitsch { 1039ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 1040ba337c44SJed Brown 1041ba337c44SJed Brown PetscFunctionBegin; 10429566063dSJacob Faibussowitsch PetscCall(MatConjugate(a->A)); 10433ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1044ba337c44SJed Brown } 1045ba337c44SJed Brown 104666976f2fSJacob Faibussowitsch static PetscErrorCode MatRealPart_MPIDense(Mat A) 1047d71ae5a4SJacob Faibussowitsch { 1048ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1049ba337c44SJed Brown 1050ba337c44SJed Brown PetscFunctionBegin; 10519566063dSJacob Faibussowitsch PetscCall(MatRealPart(a->A)); 10523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1053ba337c44SJed Brown } 1054ba337c44SJed Brown 105566976f2fSJacob Faibussowitsch static PetscErrorCode MatImaginaryPart_MPIDense(Mat A) 1056d71ae5a4SJacob Faibussowitsch { 1057ba337c44SJed Brown Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1058ba337c44SJed Brown 1059ba337c44SJed Brown PetscFunctionBegin; 10609566063dSJacob Faibussowitsch PetscCall(MatImaginaryPart(a->A)); 10613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1062ba337c44SJed Brown } 1063ba337c44SJed Brown 1064d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatGetColumnVector_MPIDense(Mat A, Vec v, PetscInt col) 1065d71ae5a4SJacob Faibussowitsch { 1066637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 106749a6ff4bSBarry Smith 106849a6ff4bSBarry Smith PetscFunctionBegin; 106928b400f6SJacob Faibussowitsch PetscCheck(a->A, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing local matrix"); 107028b400f6SJacob Faibussowitsch PetscCheck(a->A->ops->getcolumnvector, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Missing get column operation"); 10719566063dSJacob Faibussowitsch PetscCall((*a->A->ops->getcolumnvector)(a->A, v, col)); 10723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 107349a6ff4bSBarry Smith } 107449a6ff4bSBarry Smith 1075857cbf51SRichard Tran Mills PETSC_INTERN PetscErrorCode MatGetColumnReductions_SeqDense(Mat, PetscInt, PetscReal *); 107652c5f739Sprj- 107766976f2fSJacob Faibussowitsch static PetscErrorCode MatGetColumnReductions_MPIDense(Mat A, PetscInt type, PetscReal *reductions) 1078d71ae5a4SJacob Faibussowitsch { 1079a873a8cdSSam Reynolds PetscInt i, m, n; 10800716a85fSBarry Smith Mat_MPIDense *a = (Mat_MPIDense *)A->data; 10810716a85fSBarry Smith PetscReal *work; 10820716a85fSBarry Smith 10830716a85fSBarry Smith PetscFunctionBegin; 10849566063dSJacob Faibussowitsch PetscCall(MatGetSize(A, &m, &n)); 10859566063dSJacob Faibussowitsch PetscCall(PetscMalloc1(n, &work)); 1086857cbf51SRichard Tran Mills if (type == REDUCTION_MEAN_REALPART) { 10879566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_REALPART, work)); 1088857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_IMAGINARYPART) { 10899566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, (PetscInt)REDUCTION_SUM_IMAGINARYPART, work)); 1090a873a8cdSSam Reynolds } else { 10919566063dSJacob Faibussowitsch PetscCall(MatGetColumnReductions_SeqDense(a->A, type, work)); 1092a873a8cdSSam Reynolds } 1093857cbf51SRichard Tran Mills if (type == NORM_2) { 10940716a85fSBarry Smith for (i = 0; i < n; i++) work[i] *= work[i]; 10950716a85fSBarry Smith } 1096857cbf51SRichard Tran Mills if (type == NORM_INFINITY) { 10971c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(work, reductions, n, MPIU_REAL, MPIU_MAX, A->hdr.comm)); 10980716a85fSBarry Smith } else { 10991c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(work, reductions, n, MPIU_REAL, MPIU_SUM, A->hdr.comm)); 11000716a85fSBarry Smith } 11019566063dSJacob Faibussowitsch PetscCall(PetscFree(work)); 1102857cbf51SRichard Tran Mills if (type == NORM_2) { 1103a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] = PetscSqrtReal(reductions[i]); 1104857cbf51SRichard Tran Mills } else if (type == REDUCTION_MEAN_REALPART || type == REDUCTION_MEAN_IMAGINARYPART) { 1105a873a8cdSSam Reynolds for (i = 0; i < n; i++) reductions[i] /= m; 11060716a85fSBarry Smith } 11073ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 11080716a85fSBarry Smith } 11090716a85fSBarry Smith 1110d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetRandom_MPIDense(Mat x, PetscRandom rctx) 1111d71ae5a4SJacob Faibussowitsch { 111273a71a0fSBarry Smith Mat_MPIDense *d = (Mat_MPIDense *)x->data; 111373a71a0fSBarry Smith 111473a71a0fSBarry Smith PetscFunctionBegin; 11159566063dSJacob Faibussowitsch PetscCall(MatSetRandom(d->A, rctx)); 11163faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 11173faff063SStefano Zampini x->offloadmask = d->A->offloadmask; 11183faff063SStefano Zampini #endif 11193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 112073a71a0fSBarry Smith } 112173a71a0fSBarry Smith 1122d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A, PetscBool *missing, PetscInt *d) 1123d71ae5a4SJacob Faibussowitsch { 11243b49f96aSBarry Smith PetscFunctionBegin; 11253b49f96aSBarry Smith *missing = PETSC_FALSE; 11263ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 11273b49f96aSBarry Smith } 11283b49f96aSBarry Smith 11294222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1130cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 11316718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat, Mat, PetscReal, Mat); 1132a1f9a5e6SStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat, Mat, Mat); 11336718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat, Mat, PetscBool *); 11346718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat, PetscViewer); 11355d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat); 1136cc48ffa7SToby Isaac 113709dc0095SBarry Smith static struct _MatOps MatOps_Values = {MatSetValues_MPIDense, 113809dc0095SBarry Smith MatGetRow_MPIDense, 113909dc0095SBarry Smith MatRestoreRow_MPIDense, 114009dc0095SBarry Smith MatMult_MPIDense, 114197304618SKris Buschelman /* 4*/ MatMultAdd_MPIDense, 11427c922b88SBarry Smith MatMultTranspose_MPIDense, 11437c922b88SBarry Smith MatMultTransposeAdd_MPIDense, 1144f4259b30SLisandro Dalcin NULL, 1145f4259b30SLisandro Dalcin NULL, 1146f4259b30SLisandro Dalcin NULL, 1147f4259b30SLisandro Dalcin /* 10*/ NULL, 1148f4259b30SLisandro Dalcin NULL, 1149f4259b30SLisandro Dalcin NULL, 1150f4259b30SLisandro Dalcin NULL, 115109dc0095SBarry Smith MatTranspose_MPIDense, 115297304618SKris Buschelman /* 15*/ MatGetInfo_MPIDense, 11536e4ee0c6SHong Zhang MatEqual_MPIDense, 115409dc0095SBarry Smith MatGetDiagonal_MPIDense, 11555b2fa520SLois Curfman McInnes MatDiagonalScale_MPIDense, 115609dc0095SBarry Smith MatNorm_MPIDense, 115797304618SKris Buschelman /* 20*/ MatAssemblyBegin_MPIDense, 115809dc0095SBarry Smith MatAssemblyEnd_MPIDense, 115909dc0095SBarry Smith MatSetOption_MPIDense, 116009dc0095SBarry Smith MatZeroEntries_MPIDense, 1161d519adbfSMatthew Knepley /* 24*/ MatZeroRows_MPIDense, 1162f4259b30SLisandro Dalcin NULL, 1163f4259b30SLisandro Dalcin NULL, 1164f4259b30SLisandro Dalcin NULL, 1165f4259b30SLisandro Dalcin NULL, 11664994cf47SJed Brown /* 29*/ MatSetUp_MPIDense, 1167f4259b30SLisandro Dalcin NULL, 1168f4259b30SLisandro Dalcin NULL, 1169c56a70eeSBarry Smith MatGetDiagonalBlock_MPIDense, 1170f4259b30SLisandro Dalcin NULL, 1171d519adbfSMatthew Knepley /* 34*/ MatDuplicate_MPIDense, 1172f4259b30SLisandro Dalcin NULL, 1173f4259b30SLisandro Dalcin NULL, 1174f4259b30SLisandro Dalcin NULL, 1175f4259b30SLisandro Dalcin NULL, 1176d519adbfSMatthew Knepley /* 39*/ MatAXPY_MPIDense, 11777dae84e0SHong Zhang MatCreateSubMatrices_MPIDense, 1178f4259b30SLisandro Dalcin NULL, 117909dc0095SBarry Smith MatGetValues_MPIDense, 1180a76f77c3SStefano Zampini MatCopy_MPIDense, 1181f4259b30SLisandro Dalcin /* 44*/ NULL, 118209dc0095SBarry Smith MatScale_MPIDense, 11832f605a99SJose E. Roman MatShift_MPIDense, 1184f4259b30SLisandro Dalcin NULL, 1185f4259b30SLisandro Dalcin NULL, 118673a71a0fSBarry Smith /* 49*/ MatSetRandom_MPIDense, 1187f4259b30SLisandro Dalcin NULL, 1188f4259b30SLisandro Dalcin NULL, 1189f4259b30SLisandro Dalcin NULL, 1190f4259b30SLisandro Dalcin NULL, 1191f4259b30SLisandro Dalcin /* 54*/ NULL, 1192f4259b30SLisandro Dalcin NULL, 1193f4259b30SLisandro Dalcin NULL, 1194f4259b30SLisandro Dalcin NULL, 1195f4259b30SLisandro Dalcin NULL, 11967dae84e0SHong Zhang /* 59*/ MatCreateSubMatrix_MPIDense, 1197b9b97703SBarry Smith MatDestroy_MPIDense, 1198b9b97703SBarry Smith MatView_MPIDense, 1199f4259b30SLisandro Dalcin NULL, 1200f4259b30SLisandro Dalcin NULL, 1201f4259b30SLisandro Dalcin /* 64*/ NULL, 1202f4259b30SLisandro Dalcin NULL, 1203f4259b30SLisandro Dalcin NULL, 1204f4259b30SLisandro Dalcin NULL, 1205f4259b30SLisandro Dalcin NULL, 1206f4259b30SLisandro Dalcin /* 69*/ NULL, 1207f4259b30SLisandro Dalcin NULL, 1208f4259b30SLisandro Dalcin NULL, 1209f4259b30SLisandro Dalcin NULL, 1210f4259b30SLisandro Dalcin NULL, 1211f4259b30SLisandro Dalcin /* 74*/ NULL, 1212f4259b30SLisandro Dalcin NULL, 1213f4259b30SLisandro Dalcin NULL, 1214f4259b30SLisandro Dalcin NULL, 1215f4259b30SLisandro Dalcin NULL, 1216f4259b30SLisandro Dalcin /* 79*/ NULL, 1217f4259b30SLisandro Dalcin NULL, 1218f4259b30SLisandro Dalcin NULL, 1219f4259b30SLisandro Dalcin NULL, 12205bba2384SShri Abhyankar /* 83*/ MatLoad_MPIDense, 1221f4259b30SLisandro Dalcin NULL, 1222f4259b30SLisandro Dalcin NULL, 1223f4259b30SLisandro Dalcin NULL, 1224f4259b30SLisandro Dalcin NULL, 1225f4259b30SLisandro Dalcin NULL, 1226f4259b30SLisandro Dalcin /* 89*/ NULL, 1227f4259b30SLisandro Dalcin NULL, 1228f4259b30SLisandro Dalcin NULL, 1229f4259b30SLisandro Dalcin NULL, 1230f4259b30SLisandro Dalcin NULL, 1231f4259b30SLisandro Dalcin /* 94*/ NULL, 1232f4259b30SLisandro Dalcin NULL, 12336718818eSStefano Zampini MatMatTransposeMultSymbolic_MPIDense_MPIDense, 1234cc48ffa7SToby Isaac MatMatTransposeMultNumeric_MPIDense_MPIDense, 1235f4259b30SLisandro Dalcin NULL, 12364222ddf1SHong Zhang /* 99*/ MatProductSetFromOptions_MPIDense, 1237f4259b30SLisandro Dalcin NULL, 1238f4259b30SLisandro Dalcin NULL, 1239ba337c44SJed Brown MatConjugate_MPIDense, 1240f4259b30SLisandro Dalcin NULL, 1241f4259b30SLisandro Dalcin /*104*/ NULL, 1242ba337c44SJed Brown MatRealPart_MPIDense, 1243ba337c44SJed Brown MatImaginaryPart_MPIDense, 1244f4259b30SLisandro Dalcin NULL, 1245f4259b30SLisandro Dalcin NULL, 1246f4259b30SLisandro Dalcin /*109*/ NULL, 1247f4259b30SLisandro Dalcin NULL, 1248f4259b30SLisandro Dalcin NULL, 124949a6ff4bSBarry Smith MatGetColumnVector_MPIDense, 12503b49f96aSBarry Smith MatMissingDiagonal_MPIDense, 1251f4259b30SLisandro Dalcin /*114*/ NULL, 1252f4259b30SLisandro Dalcin NULL, 1253f4259b30SLisandro Dalcin NULL, 1254f4259b30SLisandro Dalcin NULL, 1255f4259b30SLisandro Dalcin NULL, 1256f4259b30SLisandro Dalcin /*119*/ NULL, 1257f4259b30SLisandro Dalcin NULL, 1258459e8d23SBlanca Mellado Pinto MatMultHermitianTranspose_MPIDense, 1259459e8d23SBlanca Mellado Pinto MatMultHermitianTransposeAdd_MPIDense, 1260f4259b30SLisandro Dalcin NULL, 1261f4259b30SLisandro Dalcin /*124*/ NULL, 1262a873a8cdSSam Reynolds MatGetColumnReductions_MPIDense, 1263f4259b30SLisandro Dalcin NULL, 1264f4259b30SLisandro Dalcin NULL, 1265f4259b30SLisandro Dalcin NULL, 1266f4259b30SLisandro Dalcin /*129*/ NULL, 1267f4259b30SLisandro Dalcin NULL, 12686718818eSStefano Zampini MatTransposeMatMultSymbolic_MPIDense_MPIDense, 1269cb20be35SHong Zhang MatTransposeMatMultNumeric_MPIDense_MPIDense, 1270f4259b30SLisandro Dalcin NULL, 1271f4259b30SLisandro Dalcin /*134*/ NULL, 1272f4259b30SLisandro Dalcin NULL, 1273f4259b30SLisandro Dalcin NULL, 1274f4259b30SLisandro Dalcin NULL, 1275f4259b30SLisandro Dalcin NULL, 1276f4259b30SLisandro Dalcin /*139*/ NULL, 1277f4259b30SLisandro Dalcin NULL, 1278f4259b30SLisandro Dalcin NULL, 1279f4259b30SLisandro Dalcin NULL, 1280f4259b30SLisandro Dalcin NULL, 12814222ddf1SHong Zhang MatCreateMPIMatConcatenateSeqMat_MPIDense, 1282f4259b30SLisandro Dalcin /*145*/ NULL, 1283f4259b30SLisandro Dalcin NULL, 128499a7f59eSMark Adams NULL, 128599a7f59eSMark Adams NULL, 12867fb60732SBarry Smith NULL, 1287dec0b466SHong Zhang /*150*/ NULL, 1288*eede4a3fSMark Adams NULL, 1289dec0b466SHong Zhang NULL}; 12908965ea79SLois Curfman McInnes 129166976f2fSJacob Faibussowitsch static PetscErrorCode MatMPIDenseSetPreallocation_MPIDense(Mat mat, PetscScalar *data) 1292d71ae5a4SJacob Faibussowitsch { 1293637a0070SStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)mat->data; 129447d993e7Ssuyashtn MatType mtype = MATSEQDENSE; 1295a23d5eceSKris Buschelman 1296a23d5eceSKris Buschelman PetscFunctionBegin; 129728b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)mat), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 12989566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->rmap)); 12999566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(mat->cmap)); 1300637a0070SStefano Zampini if (!a->A) { 13019566063dSJacob Faibussowitsch PetscCall(MatCreate(PETSC_COMM_SELF, &a->A)); 13029566063dSJacob Faibussowitsch PetscCall(MatSetSizes(a->A, mat->rmap->n, mat->cmap->N, mat->rmap->n, mat->cmap->N)); 1303637a0070SStefano Zampini } 130447d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 130547d993e7Ssuyashtn PetscBool iscuda; 13069566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSECUDA, &iscuda)); 130747d993e7Ssuyashtn if (iscuda) mtype = MATSEQDENSECUDA; 130847d993e7Ssuyashtn #endif 130947d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 131047d993e7Ssuyashtn PetscBool iship; 131147d993e7Ssuyashtn PetscCall(PetscObjectTypeCompare((PetscObject)mat, MATMPIDENSEHIP, &iship)); 131247d993e7Ssuyashtn if (iship) mtype = MATSEQDENSEHIP; 131347d993e7Ssuyashtn #endif 131447d993e7Ssuyashtn PetscCall(MatSetType(a->A, mtype)); 13159566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(a->A, data)); 131647d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 13173faff063SStefano Zampini mat->offloadmask = a->A->offloadmask; 13183faff063SStefano Zampini #endif 1319637a0070SStefano Zampini mat->preallocated = PETSC_TRUE; 13206f08ad05SPierre Jolivet mat->assembled = PETSC_TRUE; 13213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1322a23d5eceSKris Buschelman } 1323a23d5eceSKris Buschelman 1324d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1325d71ae5a4SJacob Faibussowitsch { 13264e29119aSPierre Jolivet Mat B, C; 13274e29119aSPierre Jolivet 13284e29119aSPierre Jolivet PetscFunctionBegin; 13299566063dSJacob Faibussowitsch PetscCall(MatMPIAIJGetLocalMat(A, MAT_INITIAL_MATRIX, &C)); 13309566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqAIJ_SeqDense(C, MATSEQDENSE, MAT_INITIAL_MATRIX, &B)); 13319566063dSJacob Faibussowitsch PetscCall(MatDestroy(&C)); 13324e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 13334e29119aSPierre Jolivet C = *newmat; 13344e29119aSPierre Jolivet } else C = NULL; 13359566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 13369566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 13374e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 13389566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 13394e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 13403ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 13414e29119aSPierre Jolivet } 13424e29119aSPierre Jolivet 134366976f2fSJacob Faibussowitsch static PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1344d71ae5a4SJacob Faibussowitsch { 13454e29119aSPierre Jolivet Mat B, C; 13464e29119aSPierre Jolivet 13474e29119aSPierre Jolivet PetscFunctionBegin; 13489566063dSJacob Faibussowitsch PetscCall(MatDenseGetLocalMatrix(A, &C)); 13499566063dSJacob Faibussowitsch PetscCall(MatConvert_SeqDense_SeqAIJ(C, MATSEQAIJ, MAT_INITIAL_MATRIX, &B)); 13504e29119aSPierre Jolivet if (reuse == MAT_REUSE_MATRIX) { 13514e29119aSPierre Jolivet C = *newmat; 13524e29119aSPierre Jolivet } else C = NULL; 13539566063dSJacob Faibussowitsch PetscCall(MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A), B, A->cmap->n, !C ? MAT_INITIAL_MATRIX : MAT_REUSE_MATRIX, &C)); 13549566063dSJacob Faibussowitsch PetscCall(MatDestroy(&B)); 13554e29119aSPierre Jolivet if (reuse == MAT_INPLACE_MATRIX) { 13569566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &C)); 13574e29119aSPierre Jolivet } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C; 13583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 13594e29119aSPierre Jolivet } 13604e29119aSPierre Jolivet 136165b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 1362d71ae5a4SJacob Faibussowitsch PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype, MatReuse reuse, Mat *newmat) 1363d71ae5a4SJacob Faibussowitsch { 1364f709e8d7SPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 13658ea901baSHong Zhang Mat mat_elemental; 136632d7a744SHong Zhang PetscScalar *v; 1367f709e8d7SPierre Jolivet PetscInt m = A->rmap->n, N = A->cmap->N, rstart = A->rmap->rstart, i, *rows, *cols, lda; 13688ea901baSHong Zhang 13698baccfbdSHong Zhang PetscFunctionBegin; 1370378336b6SHong Zhang if (reuse == MAT_REUSE_MATRIX) { 1371378336b6SHong Zhang mat_elemental = *newmat; 13729566063dSJacob Faibussowitsch PetscCall(MatZeroEntries(*newmat)); 1373378336b6SHong Zhang } else { 13749566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental)); 13759566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat_elemental, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 13769566063dSJacob Faibussowitsch PetscCall(MatSetType(mat_elemental, MATELEMENTAL)); 13779566063dSJacob Faibussowitsch PetscCall(MatSetUp(mat_elemental)); 13789566063dSJacob Faibussowitsch PetscCall(MatSetOption(mat_elemental, MAT_ROW_ORIENTED, PETSC_FALSE)); 1379378336b6SHong Zhang } 1380378336b6SHong Zhang 13819566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(m, &rows, N, &cols)); 138232d7a744SHong Zhang for (i = 0; i < N; i++) cols[i] = i; 138332d7a744SHong Zhang for (i = 0; i < m; i++) rows[i] = rstart + i; 13848ea901baSHong Zhang 1385637a0070SStefano Zampini /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */ 13869566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(A, &v)); 1387f709e8d7SPierre Jolivet PetscCall(MatDenseGetLDA(a->A, &lda)); 1388f709e8d7SPierre Jolivet if (lda == m) PetscCall(MatSetValues(mat_elemental, m, rows, N, cols, v, ADD_VALUES)); 1389f709e8d7SPierre Jolivet else { 1390f709e8d7SPierre Jolivet for (i = 0; i < N; i++) PetscCall(MatSetValues(mat_elemental, m, rows, 1, &i, v + lda * i, ADD_VALUES)); 1391f709e8d7SPierre Jolivet } 13929566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY)); 13939566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY)); 13949566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(A, &v)); 13959566063dSJacob Faibussowitsch PetscCall(PetscFree2(rows, cols)); 13968ea901baSHong Zhang 1397511c6705SHong Zhang if (reuse == MAT_INPLACE_MATRIX) { 13989566063dSJacob Faibussowitsch PetscCall(MatHeaderReplace(A, &mat_elemental)); 13998ea901baSHong Zhang } else { 14008ea901baSHong Zhang *newmat = mat_elemental; 14018ea901baSHong Zhang } 14023ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14038baccfbdSHong Zhang } 140465b80a83SHong Zhang #endif 14058baccfbdSHong Zhang 1406d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A, PetscInt col, PetscScalar **vals) 1407d71ae5a4SJacob Faibussowitsch { 140886aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 140986aefd0dSHong Zhang 141086aefd0dSHong Zhang PetscFunctionBegin; 14119566063dSJacob Faibussowitsch PetscCall(MatDenseGetColumn(mat->A, col, vals)); 14123ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 141386aefd0dSHong Zhang } 141486aefd0dSHong Zhang 1415d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A, PetscScalar **vals) 1416d71ae5a4SJacob Faibussowitsch { 141786aefd0dSHong Zhang Mat_MPIDense *mat = (Mat_MPIDense *)A->data; 141886aefd0dSHong Zhang 141986aefd0dSHong Zhang PetscFunctionBegin; 14209566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreColumn(mat->A, vals)); 14213ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 142286aefd0dSHong Zhang } 142386aefd0dSHong Zhang 1424d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm, Mat inmat, PetscInt n, MatReuse scall, Mat *outmat) 1425d71ae5a4SJacob Faibussowitsch { 142694e2cb23SJakub Kruzik Mat_MPIDense *mat; 142794e2cb23SJakub Kruzik PetscInt m, nloc, N; 142894e2cb23SJakub Kruzik 142994e2cb23SJakub Kruzik PetscFunctionBegin; 14309566063dSJacob Faibussowitsch PetscCall(MatGetSize(inmat, &m, &N)); 14319566063dSJacob Faibussowitsch PetscCall(MatGetLocalSize(inmat, NULL, &nloc)); 143294e2cb23SJakub Kruzik if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */ 143394e2cb23SJakub Kruzik PetscInt sum; 143494e2cb23SJakub Kruzik 143548a46eb9SPierre Jolivet if (n == PETSC_DECIDE) PetscCall(PetscSplitOwnership(comm, &n, &N)); 143694e2cb23SJakub Kruzik /* Check sum(n) = N */ 14371c2dc1cbSBarry Smith PetscCall(MPIU_Allreduce(&n, &sum, 1, MPIU_INT, MPI_SUM, comm)); 143808401ef6SPierre Jolivet PetscCheck(sum == N, PETSC_COMM_SELF, PETSC_ERR_ARG_INCOMP, "Sum of local columns %" PetscInt_FMT " != global columns %" PetscInt_FMT, sum, N); 143994e2cb23SJakub Kruzik 14409566063dSJacob Faibussowitsch PetscCall(MatCreateDense(comm, m, n, PETSC_DETERMINE, N, NULL, outmat)); 14419566063dSJacob Faibussowitsch PetscCall(MatSetOption(*outmat, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 144294e2cb23SJakub Kruzik } 144394e2cb23SJakub Kruzik 144494e2cb23SJakub Kruzik /* numeric phase */ 144594e2cb23SJakub Kruzik mat = (Mat_MPIDense *)(*outmat)->data; 14469566063dSJacob Faibussowitsch PetscCall(MatCopy(inmat, mat->A, SAME_NONZERO_PATTERN)); 14473ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 144894e2cb23SJakub Kruzik } 144994e2cb23SJakub Kruzik 1450d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1451d71ae5a4SJacob Faibussowitsch { 14526947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14536947451fSStefano Zampini PetscInt lda; 14546947451fSStefano Zampini 14556947451fSStefano Zampini PetscFunctionBegin; 145628b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 145728b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1458d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 14596947451fSStefano Zampini a->vecinuse = col + 1; 14609566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 14619566063dSJacob Faibussowitsch PetscCall(MatDenseGetArray(a->A, (PetscScalar **)&a->ptrinuse)); 14628e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 14636947451fSStefano Zampini *v = a->cvec; 14643ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14656947451fSStefano Zampini } 14666947451fSStefano Zampini 1467d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A, PetscInt col, Vec *v) 1468d71ae5a4SJacob Faibussowitsch { 14696947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14706947451fSStefano Zampini 14716947451fSStefano Zampini PetscFunctionBegin; 147228b400f6SJacob Faibussowitsch PetscCheck(a->vecinuse, PETSC_COMM_SELF, PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 147328b400f6SJacob Faibussowitsch PetscCheck(a->cvec, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing internal column vector"); 14746947451fSStefano Zampini a->vecinuse = 0; 14759566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArray(a->A, (PetscScalar **)&a->ptrinuse)); 14769566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1477742765d3SMatthew Knepley if (v) *v = NULL; 14783ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14796947451fSStefano Zampini } 14806947451fSStefano Zampini 1481d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1482d71ae5a4SJacob Faibussowitsch { 14836947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 14846947451fSStefano Zampini PetscInt lda; 14856947451fSStefano Zampini 14866947451fSStefano Zampini PetscFunctionBegin; 148728b400f6SJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 148828b400f6SJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1489d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 14906947451fSStefano Zampini a->vecinuse = col + 1; 14919566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 14929566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &a->ptrinuse)); 14938e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 14949566063dSJacob Faibussowitsch PetscCall(VecLockReadPush(a->cvec)); 14956947451fSStefano Zampini *v = a->cvec; 14963ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 14976947451fSStefano Zampini } 14986947451fSStefano Zampini 1499d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A, PetscInt col, Vec *v) 1500d71ae5a4SJacob Faibussowitsch { 15016947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15026947451fSStefano Zampini 15036947451fSStefano Zampini PetscFunctionBegin; 15045f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 15055f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 15066947451fSStefano Zampini a->vecinuse = 0; 15079566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &a->ptrinuse)); 15089566063dSJacob Faibussowitsch PetscCall(VecLockReadPop(a->cvec)); 15099566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1510742765d3SMatthew Knepley if (v) *v = NULL; 15113ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15126947451fSStefano Zampini } 15136947451fSStefano Zampini 1514d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1515d71ae5a4SJacob Faibussowitsch { 15166947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15176947451fSStefano Zampini PetscInt lda; 15186947451fSStefano Zampini 15196947451fSStefano Zampini PetscFunctionBegin; 15205f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 15215f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1522d16ceb75SStefano Zampini if (!a->cvec) PetscCall(MatDenseCreateColumnVec_Private(A, &a->cvec)); 15236947451fSStefano Zampini a->vecinuse = col + 1; 15249566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &lda)); 15259566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 15268e3a54c0SPierre Jolivet PetscCall(VecPlaceArray(a->cvec, PetscSafePointerPlusOffset(a->ptrinuse, (size_t)col * (size_t)lda))); 15276947451fSStefano Zampini *v = a->cvec; 15283ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15296947451fSStefano Zampini } 15306947451fSStefano Zampini 1531d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A, PetscInt col, Vec *v) 1532d71ae5a4SJacob Faibussowitsch { 15336947451fSStefano Zampini Mat_MPIDense *a = (Mat_MPIDense *)A->data; 15346947451fSStefano Zampini 15356947451fSStefano Zampini PetscFunctionBegin; 15365f80ce2aSJacob Faibussowitsch PetscCheck(a->vecinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetColumnVec() first"); 15375f80ce2aSJacob Faibussowitsch PetscCheck(a->cvec, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal column vector"); 15386947451fSStefano Zampini a->vecinuse = 0; 15399566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(a->A, (PetscScalar **)&a->ptrinuse)); 15409566063dSJacob Faibussowitsch PetscCall(VecResetArray(a->cvec)); 1541742765d3SMatthew Knepley if (v) *v = NULL; 15423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 15436947451fSStefano Zampini } 15446947451fSStefano Zampini 154566976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A, PetscInt rbegin, PetscInt rend, PetscInt cbegin, PetscInt cend, Mat *v) 1546d71ae5a4SJacob Faibussowitsch { 15475ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1548616b8fbbSStefano Zampini Mat_MPIDense *c; 1549616b8fbbSStefano Zampini MPI_Comm comm; 1550a2748737SPierre Jolivet PetscInt pbegin, pend; 15515ea7661aSPierre Jolivet 15525ea7661aSPierre Jolivet PetscFunctionBegin; 15539566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 15545f80ce2aSJacob Faibussowitsch PetscCheck(!a->vecinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreColumnVec() first"); 15555f80ce2aSJacob Faibussowitsch PetscCheck(!a->matinuse, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1556a2748737SPierre Jolivet pbegin = PetscMax(0, PetscMin(A->rmap->rend, rbegin) - A->rmap->rstart); 1557a2748737SPierre Jolivet pend = PetscMin(A->rmap->n, PetscMax(0, rend - A->rmap->rstart)); 15585ea7661aSPierre Jolivet if (!a->cmat) { 15599566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, &a->cmat)); 15609566063dSJacob Faibussowitsch PetscCall(MatSetType(a->cmat, ((PetscObject)A)->type_name)); 1561a2748737SPierre Jolivet if (rend - rbegin == A->rmap->N) PetscCall(PetscLayoutReference(A->rmap, &a->cmat->rmap)); 1562a2748737SPierre Jolivet else { 1563a2748737SPierre Jolivet PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, pend - pbegin)); 1564a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1565a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1566a2748737SPierre Jolivet } 15679566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 15689566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 1569a2748737SPierre Jolivet } else { 1570a2748737SPierre Jolivet PetscBool same = (PetscBool)(rend - rbegin == a->cmat->rmap->N); 1571a2748737SPierre Jolivet if (same && a->cmat->rmap->N != A->rmap->N) { 1572a2748737SPierre Jolivet same = (PetscBool)(pend - pbegin == a->cmat->rmap->n); 1573a2748737SPierre Jolivet PetscCall(MPIU_Allreduce(MPI_IN_PLACE, &same, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 1574a2748737SPierre Jolivet } 1575a2748737SPierre Jolivet if (!same) { 1576a2748737SPierre Jolivet PetscCall(PetscLayoutDestroy(&a->cmat->rmap)); 1577a2748737SPierre Jolivet PetscCall(PetscLayoutCreate(comm, &a->cmat->rmap)); 1578a2748737SPierre Jolivet PetscCall(PetscLayoutSetLocalSize(a->cmat->rmap, pend - pbegin)); 1579a2748737SPierre Jolivet PetscCall(PetscLayoutSetSize(a->cmat->rmap, rend - rbegin)); 1580a2748737SPierre Jolivet PetscCall(PetscLayoutSetUp(a->cmat->rmap)); 1581a2748737SPierre Jolivet } 1582a2748737SPierre Jolivet if (cend - cbegin != a->cmat->cmap->N) { 15839566063dSJacob Faibussowitsch PetscCall(PetscLayoutDestroy(&a->cmat->cmap)); 15849566063dSJacob Faibussowitsch PetscCall(PetscLayoutCreate(comm, &a->cmat->cmap)); 15859566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetSize(a->cmat->cmap, cend - cbegin)); 15869566063dSJacob Faibussowitsch PetscCall(PetscLayoutSetUp(a->cmat->cmap)); 15875ea7661aSPierre Jolivet } 1588a2748737SPierre Jolivet } 1589616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 15905f80ce2aSJacob Faibussowitsch PetscCheck(!c->A, comm, PETSC_ERR_ORDER, "Need to call MatDenseRestoreSubMatrix() first"); 1591a2748737SPierre Jolivet PetscCall(MatDenseGetSubMatrix(a->A, pbegin, pend, cbegin, cend, &c->A)); 15923faff063SStefano Zampini 1593616b8fbbSStefano Zampini a->cmat->preallocated = PETSC_TRUE; 1594616b8fbbSStefano Zampini a->cmat->assembled = PETSC_TRUE; 15953faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 15963faff063SStefano Zampini a->cmat->offloadmask = c->A->offloadmask; 15973faff063SStefano Zampini #endif 15985ea7661aSPierre Jolivet a->matinuse = cbegin + 1; 15995ea7661aSPierre Jolivet *v = a->cmat; 16003ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16015ea7661aSPierre Jolivet } 16025ea7661aSPierre Jolivet 160366976f2fSJacob Faibussowitsch static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A, Mat *v) 1604d71ae5a4SJacob Faibussowitsch { 16055ea7661aSPierre Jolivet Mat_MPIDense *a = (Mat_MPIDense *)A->data; 1606616b8fbbSStefano Zampini Mat_MPIDense *c; 16075ea7661aSPierre Jolivet 16085ea7661aSPierre Jolivet PetscFunctionBegin; 16095f80ce2aSJacob Faibussowitsch PetscCheck(a->matinuse, PetscObjectComm((PetscObject)A), PETSC_ERR_ORDER, "Need to call MatDenseGetSubMatrix() first"); 16105f80ce2aSJacob Faibussowitsch PetscCheck(a->cmat, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing internal matrix"); 16115f80ce2aSJacob Faibussowitsch PetscCheck(*v == a->cmat, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Not the matrix obtained from MatDenseGetSubMatrix()"); 16125ea7661aSPierre Jolivet a->matinuse = 0; 1613616b8fbbSStefano Zampini c = (Mat_MPIDense *)a->cmat->data; 16149566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreSubMatrix(a->A, &c->A)); 1615742765d3SMatthew Knepley if (v) *v = NULL; 16163faff063SStefano Zampini #if defined(PETSC_HAVE_DEVICE) 16173faff063SStefano Zampini A->offloadmask = a->A->offloadmask; 16183faff063SStefano Zampini #endif 16193ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 16205ea7661aSPierre Jolivet } 16215ea7661aSPierre Jolivet 1622002bc6daSRichard Tran Mills /*MC 1623002bc6daSRichard Tran Mills MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices. 1624002bc6daSRichard Tran Mills 16252ef1f0ffSBarry Smith Options Database Key: 162611a5261eSBarry Smith . -mat_type mpidense - sets the matrix type to `MATMPIDENSE` during a call to `MatSetFromOptions()` 1627002bc6daSRichard Tran Mills 1628002bc6daSRichard Tran Mills Level: beginner 1629002bc6daSRichard Tran Mills 16301cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreateDense()`, `MATSEQDENSE`, `MATDENSE` 1631002bc6daSRichard Tran Mills M*/ 16324742e46bSJacob Faibussowitsch PetscErrorCode MatCreate_MPIDense(Mat mat) 1633d71ae5a4SJacob Faibussowitsch { 1634273d9f13SBarry Smith Mat_MPIDense *a; 1635273d9f13SBarry Smith 1636273d9f13SBarry Smith PetscFunctionBegin; 16374dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&a)); 1638b0a32e0cSBarry Smith mat->data = (void *)a; 1639aea10558SJacob Faibussowitsch mat->ops[0] = MatOps_Values; 1640273d9f13SBarry Smith 1641273d9f13SBarry Smith mat->insertmode = NOT_SET_VALUES; 1642273d9f13SBarry Smith 1643273d9f13SBarry Smith /* build cache for off array entries formed */ 1644273d9f13SBarry Smith a->donotstash = PETSC_FALSE; 16452205254eSKarl Rupp 16469566063dSJacob Faibussowitsch PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat), 1, &mat->stash)); 1647273d9f13SBarry Smith 1648273d9f13SBarry Smith /* stuff used for matrix vector multiply */ 1649f4259b30SLisandro Dalcin a->lvec = NULL; 1650f4259b30SLisandro Dalcin a->Mvctx = NULL; 1651273d9f13SBarry Smith a->roworiented = PETSC_TRUE; 1652273d9f13SBarry Smith 16539566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetLDA_C", MatDenseGetLDA_MPIDense)); 16549566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseSetLDA_C", MatDenseSetLDA_MPIDense)); 16559566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArray_C", MatDenseGetArray_MPIDense)); 16569566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArray_C", MatDenseRestoreArray_MPIDense)); 16579566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayRead_C", MatDenseGetArrayRead_MPIDense)); 16589566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayRead_C", MatDenseRestoreArrayRead_MPIDense)); 16599566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetArrayWrite_C", MatDenseGetArrayWrite_MPIDense)); 16609566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreArrayWrite_C", MatDenseRestoreArrayWrite_MPIDense)); 16619566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDensePlaceArray_C", MatDensePlaceArray_MPIDense)); 16629566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseResetArray_C", MatDenseResetArray_MPIDense)); 16639566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseReplaceArray_C", MatDenseReplaceArray_MPIDense)); 16649566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVec_C", MatDenseGetColumnVec_MPIDense)); 16659566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVec_C", MatDenseRestoreColumnVec_MPIDense)); 16669566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecRead_C", MatDenseGetColumnVecRead_MPIDense)); 16679566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecRead_C", MatDenseRestoreColumnVecRead_MPIDense)); 16689566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumnVecWrite_C", MatDenseGetColumnVecWrite_MPIDense)); 16699566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumnVecWrite_C", MatDenseRestoreColumnVecWrite_MPIDense)); 16709566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetSubMatrix_C", MatDenseGetSubMatrix_MPIDense)); 16719566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreSubMatrix_C", MatDenseRestoreSubMatrix_MPIDense)); 16729566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpiaij_mpidense_C", MatConvert_MPIAIJ_MPIDense)); 16739566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpiaij_C", MatConvert_MPIDense_MPIAIJ)); 16748baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL) 16759566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_elemental_C", MatConvert_MPIDense_Elemental)); 16768baccfbdSHong Zhang #endif 1677d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK) 16789566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_scalapack_C", MatConvert_Dense_ScaLAPACK)); 1679d24d4204SJose E. Roman #endif 1680637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA) 16819566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensecuda_C", MatConvert_MPIDense_MPIDenseCUDA)); 1682637a0070SStefano Zampini #endif 16839566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatMPIDenseSetPreallocation_C", MatMPIDenseSetPreallocation_MPIDense)); 16849566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaij_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 16859566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaij_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 16866718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA) 16879566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijcusparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 16889566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijcusparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 16896718818eSStefano Zampini #endif 169047d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 169147d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatConvert_mpidense_mpidensehip_C", MatConvert_MPIDense_MPIDenseHIP)); 169247d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpiaijhipsparse_mpidense_C", MatProductSetFromOptions_MPIAIJ_MPIDense)); 169347d993e7Ssuyashtn PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatProductSetFromOptions_mpidense_mpiaijhipsparse_C", MatProductSetFromOptions_MPIDense_MPIAIJ)); 169447d993e7Ssuyashtn #endif 16959566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseGetColumn_C", MatDenseGetColumn_MPIDense)); 16969566063dSJacob Faibussowitsch PetscCall(PetscObjectComposeFunction((PetscObject)mat, "MatDenseRestoreColumn_C", MatDenseRestoreColumn_MPIDense)); 16979566063dSJacob Faibussowitsch PetscCall(PetscObjectChangeTypeName((PetscObject)mat, MATMPIDENSE)); 16983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1699273d9f13SBarry Smith } 1700273d9f13SBarry Smith 1701209238afSKris Buschelman /*MC 1702002d173eSKris Buschelman MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices. 1703209238afSKris Buschelman 170411a5261eSBarry Smith This matrix type is identical to `MATSEQDENSE` when constructed with a single process communicator, 170511a5261eSBarry Smith and `MATMPIDENSE` otherwise. 1706209238afSKris Buschelman 17072ef1f0ffSBarry Smith Options Database Key: 170811a5261eSBarry Smith . -mat_type dense - sets the matrix type to `MATDENSE` during a call to `MatSetFromOptions()` 1709209238afSKris Buschelman 1710209238afSKris Buschelman Level: beginner 1711209238afSKris Buschelman 17121cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATSEQDENSE`, `MATMPIDENSE`, `MATDENSECUDA`, `MATDENSEHIP` 17136947451fSStefano Zampini M*/ 17146947451fSStefano Zampini 1715273d9f13SBarry Smith /*@C 1716273d9f13SBarry Smith MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries 1717273d9f13SBarry Smith 17188f490ea3SStefano Zampini Collective 1719273d9f13SBarry Smith 1720273d9f13SBarry Smith Input Parameters: 1721fe59aa6dSJacob Faibussowitsch + B - the matrix 17222ef1f0ffSBarry Smith - data - optional location of matrix data. Set to `NULL` for PETSc 1723273d9f13SBarry Smith to control all matrix memory allocation. 1724273d9f13SBarry Smith 17252ef1f0ffSBarry Smith Level: intermediate 17262ef1f0ffSBarry Smith 1727273d9f13SBarry Smith Notes: 17282ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 1729273d9f13SBarry Smith storage by columns. 1730273d9f13SBarry Smith 1731273d9f13SBarry Smith The data input variable is intended primarily for Fortran programmers 1732273d9f13SBarry Smith who wish to allocate their own matrix memory space. Most users should 17332ef1f0ffSBarry Smith set `data` to `NULL`. 1734273d9f13SBarry Smith 17351cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATMPIDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 1736273d9f13SBarry Smith @*/ 1737d71ae5a4SJacob Faibussowitsch PetscErrorCode MatMPIDenseSetPreallocation(Mat B, PetscScalar *data) 1738d71ae5a4SJacob Faibussowitsch { 1739273d9f13SBarry Smith PetscFunctionBegin; 1740d5ea218eSStefano Zampini PetscValidHeaderSpecific(B, MAT_CLASSID, 1); 1741cac4c232SBarry Smith PetscTryMethod(B, "MatMPIDenseSetPreallocation_C", (Mat, PetscScalar *), (B, data)); 17423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1743273d9f13SBarry Smith } 1744273d9f13SBarry Smith 1745d3042a70SBarry Smith /*@ 174611a5261eSBarry Smith MatDensePlaceArray - Allows one to replace the array in a `MATDENSE` matrix with an 1747d3042a70SBarry Smith array provided by the user. This is useful to avoid copying an array 1748d3042a70SBarry Smith into a matrix 1749d3042a70SBarry Smith 1750d3042a70SBarry Smith Not Collective 1751d3042a70SBarry Smith 1752d3042a70SBarry Smith Input Parameters: 1753d3042a70SBarry Smith + mat - the matrix 1754d3042a70SBarry Smith - array - the array in column major order 1755d3042a70SBarry Smith 17562ef1f0ffSBarry Smith Level: developer 17572ef1f0ffSBarry Smith 175811a5261eSBarry Smith Note: 175911a5261eSBarry Smith You can return to the original array with a call to `MatDenseResetArray()`. The user is responsible for freeing this array; it will not be 1760d3042a70SBarry Smith freed when the matrix is destroyed. 1761d3042a70SBarry Smith 17621cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDenseResetArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()`, 176311a5261eSBarry Smith `MatDenseReplaceArray()` 1764d3042a70SBarry Smith @*/ 1765d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDensePlaceArray(Mat mat, const PetscScalar *array) 1766d71ae5a4SJacob Faibussowitsch { 1767d3042a70SBarry Smith PetscFunctionBegin; 1768d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1769cac4c232SBarry Smith PetscUseMethod(mat, "MatDensePlaceArray_C", (Mat, const PetscScalar *), (mat, array)); 17709566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 177147d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1772637a0070SStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1773637a0070SStefano Zampini #endif 17743ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1775d3042a70SBarry Smith } 1776d3042a70SBarry Smith 1777d3042a70SBarry Smith /*@ 177811a5261eSBarry Smith MatDenseResetArray - Resets the matrix array to that it previously had before the call to `MatDensePlaceArray()` 1779d3042a70SBarry Smith 1780d3042a70SBarry Smith Not Collective 1781d3042a70SBarry Smith 17822fe279fdSBarry Smith Input Parameter: 1783d3042a70SBarry Smith . mat - the matrix 1784d3042a70SBarry Smith 17852ef1f0ffSBarry Smith Level: developer 17862ef1f0ffSBarry Smith 178711a5261eSBarry Smith Note: 178811a5261eSBarry Smith You can only call this after a call to `MatDensePlaceArray()` 1789d3042a70SBarry Smith 17901cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatDenseGetArray()`, `MatDensePlaceArray()`, `VecPlaceArray()`, `VecGetArray()`, `VecRestoreArray()`, `VecReplaceArray()`, `VecResetArray()` 1791d3042a70SBarry Smith @*/ 1792d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseResetArray(Mat mat) 1793d71ae5a4SJacob Faibussowitsch { 1794d3042a70SBarry Smith PetscFunctionBegin; 1795d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1796cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseResetArray_C", (Mat), (mat)); 17979566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 17983ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1799d3042a70SBarry Smith } 1800d3042a70SBarry Smith 1801d5ea218eSStefano Zampini /*@ 1802d5ea218eSStefano Zampini MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an 1803d5ea218eSStefano Zampini array provided by the user. This is useful to avoid copying an array 1804d5ea218eSStefano Zampini into a matrix 1805d5ea218eSStefano Zampini 1806d5ea218eSStefano Zampini Not Collective 1807d5ea218eSStefano Zampini 1808d5ea218eSStefano Zampini Input Parameters: 1809d5ea218eSStefano Zampini + mat - the matrix 1810d5ea218eSStefano Zampini - array - the array in column major order 1811d5ea218eSStefano Zampini 18122ef1f0ffSBarry Smith Level: developer 18132ef1f0ffSBarry Smith 181411a5261eSBarry Smith Note: 181511a5261eSBarry Smith The memory passed in MUST be obtained with `PetscMalloc()` and CANNOT be 1816d5ea218eSStefano Zampini freed by the user. It will be freed when the matrix is destroyed. 1817d5ea218eSStefano Zampini 18181cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatDensePlaceArray()`, `MatDenseGetArray()`, `VecReplaceArray()` 1819d5ea218eSStefano Zampini @*/ 1820d71ae5a4SJacob Faibussowitsch PetscErrorCode MatDenseReplaceArray(Mat mat, const PetscScalar *array) 1821d71ae5a4SJacob Faibussowitsch { 1822d5ea218eSStefano Zampini PetscFunctionBegin; 1823d5ea218eSStefano Zampini PetscValidHeaderSpecific(mat, MAT_CLASSID, 1); 1824cac4c232SBarry Smith PetscUseMethod(mat, "MatDenseReplaceArray_C", (Mat, const PetscScalar *), (mat, array)); 18259566063dSJacob Faibussowitsch PetscCall(PetscObjectStateIncrease((PetscObject)mat)); 182647d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) || defined(PETSC_HAVE_HIP) 1827d5ea218eSStefano Zampini mat->offloadmask = PETSC_OFFLOAD_CPU; 1828d5ea218eSStefano Zampini #endif 18293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1830d5ea218eSStefano Zampini } 1831d5ea218eSStefano Zampini 1832637a0070SStefano Zampini /*@C 183311a5261eSBarry Smith MatCreateDense - Creates a matrix in `MATDENSE` format. 18348965ea79SLois Curfman McInnes 1835d083f849SBarry Smith Collective 1836db81eaa0SLois Curfman McInnes 18378965ea79SLois Curfman McInnes Input Parameters: 1838db81eaa0SLois Curfman McInnes + comm - MPI communicator 18392ef1f0ffSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if `M` is given) 18402ef1f0ffSBarry Smith . n - number of local columns (or `PETSC_DECIDE` to have calculated if `N` is given) 18412ef1f0ffSBarry Smith . M - number of global rows (or `PETSC_DECIDE` to have calculated if `m` is given) 18422ef1f0ffSBarry Smith . N - number of global columns (or `PETSC_DECIDE` to have calculated if `n` is given) 18432ef1f0ffSBarry Smith - data - optional location of matrix data. Set data to `NULL` (`PETSC_NULL_SCALAR` for Fortran users) for PETSc 1844dfc5480cSLois Curfman McInnes to control all matrix memory allocation. 18458965ea79SLois Curfman McInnes 18468965ea79SLois Curfman McInnes Output Parameter: 1847477f1c0bSLois Curfman McInnes . A - the matrix 18488965ea79SLois Curfman McInnes 18492ef1f0ffSBarry Smith Level: intermediate 18502ef1f0ffSBarry Smith 1851b259b22eSLois Curfman McInnes Notes: 18522ef1f0ffSBarry Smith The dense format is fully compatible with standard Fortran 185339ddd567SLois Curfman McInnes storage by columns. 185411a5261eSBarry Smith 185511a5261eSBarry Smith Although local portions of the matrix are stored in column-major 1856002bc6daSRichard Tran Mills order, the matrix is partitioned across MPI ranks by row. 18578965ea79SLois Curfman McInnes 185818f449edSLois Curfman McInnes The data input variable is intended primarily for Fortran programmers 185918f449edSLois Curfman McInnes who wish to allocate their own matrix memory space. Most users should 18602ef1f0ffSBarry Smith set `data` to `NULL` (`PETSC_NULL_SCALAR` for Fortran users). 186118f449edSLois Curfman McInnes 18628965ea79SLois Curfman McInnes The user MUST specify either the local or global matrix dimensions 18638965ea79SLois Curfman McInnes (possibly both). 18648965ea79SLois Curfman McInnes 18651cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATDENSE`, `MatCreate()`, `MatCreateSeqDense()`, `MatSetValues()` 18668965ea79SLois Curfman McInnes @*/ 1867d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateDense(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscScalar *data, Mat *A) 1868d71ae5a4SJacob Faibussowitsch { 18693a40ed3dSBarry Smith PetscFunctionBegin; 18709566063dSJacob Faibussowitsch PetscCall(MatCreate(comm, A)); 18719566063dSJacob Faibussowitsch PetscCall(MatSetSizes(*A, m, n, M, N)); 18726f08ad05SPierre Jolivet PetscCall(MatSetType(*A, MATDENSE)); 18739566063dSJacob Faibussowitsch PetscCall(MatSeqDenseSetPreallocation(*A, data)); 18746f08ad05SPierre Jolivet PetscCall(MatMPIDenseSetPreallocation(*A, data)); 18753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 18768965ea79SLois Curfman McInnes } 18778965ea79SLois Curfman McInnes 1878d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDuplicate_MPIDense(Mat A, MatDuplicateOption cpvalues, Mat *newmat) 1879d71ae5a4SJacob Faibussowitsch { 18808965ea79SLois Curfman McInnes Mat mat; 18813501a2bdSLois Curfman McInnes Mat_MPIDense *a, *oldmat = (Mat_MPIDense *)A->data; 18828965ea79SLois Curfman McInnes 18833a40ed3dSBarry Smith PetscFunctionBegin; 1884f4259b30SLisandro Dalcin *newmat = NULL; 18859566063dSJacob Faibussowitsch PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &mat)); 18869566063dSJacob Faibussowitsch PetscCall(MatSetSizes(mat, A->rmap->n, A->cmap->n, A->rmap->N, A->cmap->N)); 18879566063dSJacob Faibussowitsch PetscCall(MatSetType(mat, ((PetscObject)A)->type_name)); 1888834f8fabSBarry Smith a = (Mat_MPIDense *)mat->data; 18895aa7edbeSHong Zhang 1890d5f3da31SBarry Smith mat->factortype = A->factortype; 1891c456f294SBarry Smith mat->assembled = PETSC_TRUE; 1892273d9f13SBarry Smith mat->preallocated = PETSC_TRUE; 18938965ea79SLois Curfman McInnes 1894e0fa3b82SLois Curfman McInnes mat->insertmode = NOT_SET_VALUES; 18953782ba37SSatish Balay a->donotstash = oldmat->donotstash; 1896e04c1aa4SHong Zhang 18979566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->rmap, &mat->rmap)); 18989566063dSJacob Faibussowitsch PetscCall(PetscLayoutReference(A->cmap, &mat->cmap)); 18998965ea79SLois Curfman McInnes 19009566063dSJacob Faibussowitsch PetscCall(MatDuplicate(oldmat->A, cpvalues, &a->A)); 190101b82886SBarry Smith 19028965ea79SLois Curfman McInnes *newmat = mat; 19033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19048965ea79SLois Curfman McInnes } 19058965ea79SLois Curfman McInnes 190666976f2fSJacob Faibussowitsch static PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer) 1907d71ae5a4SJacob Faibussowitsch { 190887d5ce66SSatish Balay PetscBool isbinary; 190987d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 191087d5ce66SSatish Balay PetscBool ishdf5; 191187d5ce66SSatish Balay #endif 1912eb91f321SVaclav Hapla 1913eb91f321SVaclav Hapla PetscFunctionBegin; 1914eb91f321SVaclav Hapla PetscValidHeaderSpecific(newMat, MAT_CLASSID, 1); 1915eb91f321SVaclav Hapla PetscValidHeaderSpecific(viewer, PETSC_VIEWER_CLASSID, 2); 1916eb91f321SVaclav Hapla /* force binary viewer to load .info file if it has not yet done so */ 19179566063dSJacob Faibussowitsch PetscCall(PetscViewerSetUp(viewer)); 19189566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERBINARY, &isbinary)); 191987d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5) 19209566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompare((PetscObject)viewer, PETSCVIEWERHDF5, &ishdf5)); 192187d5ce66SSatish Balay #endif 1922eb91f321SVaclav Hapla if (isbinary) { 19239566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_Binary(newMat, viewer)); 1924eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5) 192587d5ce66SSatish Balay } else if (ishdf5) { 19269566063dSJacob Faibussowitsch PetscCall(MatLoad_Dense_HDF5(newMat, viewer)); 1927eb91f321SVaclav Hapla #endif 192898921bdaSJacob Faibussowitsch } else SETERRQ(PetscObjectComm((PetscObject)newMat), PETSC_ERR_SUP, "Viewer type %s not yet supported for reading %s matrices", ((PetscObject)viewer)->type_name, ((PetscObject)newMat)->type_name); 19293ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1930eb91f321SVaclav Hapla } 1931eb91f321SVaclav Hapla 1932d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatEqual_MPIDense(Mat A, Mat B, PetscBool *flag) 1933d71ae5a4SJacob Faibussowitsch { 19346e4ee0c6SHong Zhang Mat_MPIDense *matB = (Mat_MPIDense *)B->data, *matA = (Mat_MPIDense *)A->data; 19356e4ee0c6SHong Zhang Mat a, b; 193690ace30eSBarry Smith 19376e4ee0c6SHong Zhang PetscFunctionBegin; 19386e4ee0c6SHong Zhang a = matA->A; 19396e4ee0c6SHong Zhang b = matB->A; 19402cf15c64SPierre Jolivet PetscCall(MatEqual(a, b, flag)); 19412cf15c64SPierre Jolivet PetscCall(MPIU_Allreduce(MPI_IN_PLACE, flag, 1, MPIU_BOOL, MPI_LAND, PetscObjectComm((PetscObject)A))); 19423ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 19436e4ee0c6SHong Zhang } 194490ace30eSBarry Smith 194566976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data) 1946d71ae5a4SJacob Faibussowitsch { 19476718818eSStefano Zampini Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data; 1948baa3c1c6SHong Zhang 1949baa3c1c6SHong Zhang PetscFunctionBegin; 19509566063dSJacob Faibussowitsch PetscCall(PetscFree2(atb->sendbuf, atb->recvcounts)); 19519566063dSJacob Faibussowitsch PetscCall(MatDestroy(&atb->atb)); 19529566063dSJacob Faibussowitsch PetscCall(PetscFree(atb)); 19533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1954baa3c1c6SHong Zhang } 1955baa3c1c6SHong Zhang 195666976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data) 1957d71ae5a4SJacob Faibussowitsch { 19586718818eSStefano Zampini Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data; 1959cc48ffa7SToby Isaac 1960cc48ffa7SToby Isaac PetscFunctionBegin; 19619566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->buf[0], abt->buf[1])); 19629566063dSJacob Faibussowitsch PetscCall(PetscFree2(abt->recvcounts, abt->recvdispls)); 19639566063dSJacob Faibussowitsch PetscCall(PetscFree(abt)); 19643ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1965cc48ffa7SToby Isaac } 1966cc48ffa7SToby Isaac 1967d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 1968d71ae5a4SJacob Faibussowitsch { 1969baa3c1c6SHong Zhang Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 19706718818eSStefano Zampini Mat_TransMatMultDense *atb; 1971cb20be35SHong Zhang MPI_Comm comm; 19726718818eSStefano Zampini PetscMPIInt size, *recvcounts; 19736718818eSStefano Zampini PetscScalar *carray, *sendbuf; 1974637a0070SStefano Zampini const PetscScalar *atbarray; 1975a1f9a5e6SStefano Zampini PetscInt i, cN = C->cmap->N, proc, k, j, lda; 1976e68c0b26SHong Zhang const PetscInt *ranges; 1977cb20be35SHong Zhang 1978cb20be35SHong Zhang PetscFunctionBegin; 19796718818eSStefano Zampini MatCheckProduct(C, 3); 19805f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 19816718818eSStefano Zampini atb = (Mat_TransMatMultDense *)C->product->data; 19826718818eSStefano Zampini recvcounts = atb->recvcounts; 19836718818eSStefano Zampini sendbuf = atb->sendbuf; 19846718818eSStefano Zampini 19859566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 19869566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 1987e68c0b26SHong Zhang 1988c5ef1628SHong Zhang /* compute atbarray = aseq^T * bseq */ 19899566063dSJacob Faibussowitsch PetscCall(MatTransposeMatMult(a->A, b->A, atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX, PETSC_DEFAULT, &atb->atb)); 1990cb20be35SHong Zhang 19919566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 1992cb20be35SHong Zhang 1993660d5466SHong Zhang /* arrange atbarray into sendbuf */ 19949566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(atb->atb, &atbarray)); 19959566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(atb->atb, &lda)); 1996637a0070SStefano Zampini for (proc = 0, k = 0; proc < size; proc++) { 1997baa3c1c6SHong Zhang for (j = 0; j < cN; j++) { 1998a1f9a5e6SStefano Zampini for (i = ranges[proc]; i < ranges[proc + 1]; i++) sendbuf[k++] = atbarray[i + j * lda]; 1999cb20be35SHong Zhang } 2000cb20be35SHong Zhang } 20019566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(atb->atb, &atbarray)); 2002637a0070SStefano Zampini 2003c5ef1628SHong Zhang /* sum all atbarray to local values of C */ 20049566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &carray)); 20059566063dSJacob Faibussowitsch PetscCallMPI(MPI_Reduce_scatter(sendbuf, carray, recvcounts, MPIU_SCALAR, MPIU_SUM, comm)); 20069566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &carray)); 200767af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 20089566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 20099566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 20103ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2011cb20be35SHong Zhang } 2012cb20be35SHong Zhang 2013d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2014d71ae5a4SJacob Faibussowitsch { 2015cb20be35SHong Zhang MPI_Comm comm; 2016baa3c1c6SHong Zhang PetscMPIInt size; 2017660d5466SHong Zhang PetscInt cm = A->cmap->n, cM, cN = B->cmap->N; 2018baa3c1c6SHong Zhang Mat_TransMatMultDense *atb; 201947d993e7Ssuyashtn PetscBool cisdense = PETSC_FALSE; 20200acaeb71SStefano Zampini PetscInt i; 20210acaeb71SStefano Zampini const PetscInt *ranges; 2022cb20be35SHong Zhang 2023cb20be35SHong Zhang PetscFunctionBegin; 20248f83a4d9SJacob Faibussowitsch MatCheckProduct(C, 4); 20255f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 20269566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 2027cb20be35SHong Zhang if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) { 202898921bdaSJacob Faibussowitsch SETERRQ(comm, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ",%" PetscInt_FMT ")", A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2029cb20be35SHong Zhang } 2030cb20be35SHong Zhang 20314222ddf1SHong Zhang /* create matrix product C */ 20329566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, cm, B->cmap->n, A->cmap->N, B->cmap->N)); 203347d993e7Ssuyashtn #if defined(PETSC_HAVE_CUDA) 20349566063dSJacob Faibussowitsch PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSECUDA, "")); 203547d993e7Ssuyashtn #endif 203647d993e7Ssuyashtn #if defined(PETSC_HAVE_HIP) 203747d993e7Ssuyashtn PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATMPIDENSE, MATMPIDENSEHIP, "")); 203847d993e7Ssuyashtn #endif 203948a46eb9SPierre Jolivet if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)A)->type_name)); 20409566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2041baa3c1c6SHong Zhang 20424222ddf1SHong Zhang /* create data structure for reuse C */ 20439566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 20449566063dSJacob Faibussowitsch PetscCall(PetscNew(&atb)); 20454222ddf1SHong Zhang cM = C->rmap->N; 20469566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(cM * cN, &atb->sendbuf, size, &atb->recvcounts)); 20479566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(C, &ranges)); 20480acaeb71SStefano Zampini for (i = 0; i < size; i++) atb->recvcounts[i] = (ranges[i + 1] - ranges[i]) * cN; 2049baa3c1c6SHong Zhang 20506718818eSStefano Zampini C->product->data = atb; 20516718818eSStefano Zampini C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense; 20523ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2053cb20be35SHong Zhang } 2054cb20be35SHong Zhang 2055d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2056d71ae5a4SJacob Faibussowitsch { 2057cc48ffa7SToby Isaac MPI_Comm comm; 2058cc48ffa7SToby Isaac PetscMPIInt i, size; 2059cc48ffa7SToby Isaac PetscInt maxRows, bufsiz; 2060cc48ffa7SToby Isaac PetscMPIInt tag; 20614222ddf1SHong Zhang PetscInt alg; 2062cc48ffa7SToby Isaac Mat_MatTransMultDense *abt; 20634222ddf1SHong Zhang Mat_Product *product = C->product; 20644222ddf1SHong Zhang PetscBool flg; 2065cc48ffa7SToby Isaac 2066cc48ffa7SToby Isaac PetscFunctionBegin; 20676718818eSStefano Zampini MatCheckProduct(C, 4); 20685f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 20694222ddf1SHong Zhang /* check local size of A and B */ 20705f80ce2aSJacob Faibussowitsch PetscCheck(A->cmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local column dimensions are incompatible, A (%" PetscInt_FMT ") != B (%" PetscInt_FMT ")", A->cmap->n, B->cmap->n); 2071cc48ffa7SToby Isaac 20729566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "allgatherv", &flg)); 2073637a0070SStefano Zampini alg = flg ? 0 : 1; 2074cc48ffa7SToby Isaac 20754222ddf1SHong Zhang /* setup matrix product C */ 20769566063dSJacob Faibussowitsch PetscCall(MatSetSizes(C, A->rmap->n, B->rmap->n, A->rmap->N, B->rmap->N)); 20779566063dSJacob Faibussowitsch PetscCall(MatSetType(C, MATMPIDENSE)); 20789566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 20799566063dSJacob Faibussowitsch PetscCall(PetscObjectGetNewTag((PetscObject)C, &tag)); 20804222ddf1SHong Zhang 20814222ddf1SHong Zhang /* create data structure for reuse C */ 20829566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 20839566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 20849566063dSJacob Faibussowitsch PetscCall(PetscNew(&abt)); 2085cc48ffa7SToby Isaac abt->tag = tag; 2086faa55883SToby Isaac abt->alg = alg; 2087faa55883SToby Isaac switch (alg) { 20884222ddf1SHong Zhang case 1: /* alg: "cyclic" */ 2089cc48ffa7SToby Isaac for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i])); 2090cc48ffa7SToby Isaac bufsiz = A->cmap->N * maxRows; 20919566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(bufsiz, &(abt->buf[0]), bufsiz, &(abt->buf[1]))); 2092faa55883SToby Isaac break; 20934222ddf1SHong Zhang default: /* alg: "allgatherv" */ 20949566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(B->rmap->n * B->cmap->N, &(abt->buf[0]), B->rmap->N * B->cmap->N, &(abt->buf[1]))); 20959566063dSJacob Faibussowitsch PetscCall(PetscMalloc2(size, &(abt->recvcounts), size + 1, &(abt->recvdispls))); 2096faa55883SToby Isaac for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N; 2097faa55883SToby Isaac for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i]; 2098faa55883SToby Isaac break; 2099faa55883SToby Isaac } 2100cc48ffa7SToby Isaac 21016718818eSStefano Zampini C->product->data = abt; 21026718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense; 21034222ddf1SHong Zhang C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense; 21043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2105cc48ffa7SToby Isaac } 2106cc48ffa7SToby Isaac 2107d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C) 2108d71ae5a4SJacob Faibussowitsch { 2109cc48ffa7SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 21106718818eSStefano Zampini Mat_MatTransMultDense *abt; 2111cc48ffa7SToby Isaac MPI_Comm comm; 2112cc48ffa7SToby Isaac PetscMPIInt rank, size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom; 2113f4259b30SLisandro Dalcin PetscScalar *sendbuf, *recvbuf = NULL, *cv; 2114cc48ffa7SToby Isaac PetscInt i, cK = A->cmap->N, k, j, bn; 2115cc48ffa7SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2116637a0070SStefano Zampini const PetscScalar *av, *bv; 211723fff9afSBarry Smith PetscBLASInt cm, cn, ck, alda, blda = 0, clda; 2118cc48ffa7SToby Isaac MPI_Request reqs[2]; 2119cc48ffa7SToby Isaac const PetscInt *ranges; 2120cc48ffa7SToby Isaac 2121cc48ffa7SToby Isaac PetscFunctionBegin; 21226718818eSStefano Zampini MatCheckProduct(C, 3); 21235f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 21246718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 21259566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)C, &comm)); 21269566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_rank(comm, &rank)); 21279566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 21289566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 21299566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 21309566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 21319566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 21329566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 21339566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &i)); 21349566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &blda)); 21359566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 21369566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 21379566063dSJacob Faibussowitsch PetscCall(MatGetOwnershipRanges(B, &ranges)); 2138cc48ffa7SToby Isaac bn = B->rmap->n; 2139637a0070SStefano Zampini if (blda == bn) { 2140637a0070SStefano Zampini sendbuf = (PetscScalar *)bv; 2141cc48ffa7SToby Isaac } else { 2142cc48ffa7SToby Isaac sendbuf = abt->buf[0]; 2143cc48ffa7SToby Isaac for (k = 0, i = 0; i < cK; i++) { 2144ad540459SPierre Jolivet for (j = 0; j < bn; j++, k++) sendbuf[k] = bv[i * blda + j]; 2145cc48ffa7SToby Isaac } 2146cc48ffa7SToby Isaac } 2147cc48ffa7SToby Isaac if (size > 1) { 2148cc48ffa7SToby Isaac sendto = (rank + size - 1) % size; 2149cc48ffa7SToby Isaac recvfrom = (rank + size + 1) % size; 2150cc48ffa7SToby Isaac } else { 2151cc48ffa7SToby Isaac sendto = recvfrom = 0; 2152cc48ffa7SToby Isaac } 21539566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 21549566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 2155cc48ffa7SToby Isaac recvisfrom = rank; 2156cc48ffa7SToby Isaac for (i = 0; i < size; i++) { 2157cc48ffa7SToby Isaac /* we have finished receiving in sending, bufs can be read/modified */ 2158cc48ffa7SToby Isaac PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */ 2159cc48ffa7SToby Isaac PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom]; 2160cc48ffa7SToby Isaac 2161cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2162cc48ffa7SToby Isaac /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */ 2163cc48ffa7SToby Isaac sendsiz = cK * bn; 2164cc48ffa7SToby Isaac recvsiz = cK * nextbn; 2165cc48ffa7SToby Isaac recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1]; 21669566063dSJacob Faibussowitsch PetscCallMPI(MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0])); 21679566063dSJacob Faibussowitsch PetscCallMPI(MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1])); 2168cc48ffa7SToby Isaac } 2169cc48ffa7SToby Isaac 2170cc48ffa7SToby Isaac /* local aseq * sendbuf^T */ 21719566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn)); 2172792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "T", &cm, &cn, &ck, &_DOne, av, &alda, sendbuf, &cn, &_DZero, cv + clda * ranges[recvisfrom], &clda)); 2173cc48ffa7SToby Isaac 2174cc48ffa7SToby Isaac if (nextrecvisfrom != rank) { 2175cc48ffa7SToby Isaac /* wait for the sends and receives to complete, swap sendbuf and recvbuf */ 21769566063dSJacob Faibussowitsch PetscCallMPI(MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE)); 2177cc48ffa7SToby Isaac } 2178cc48ffa7SToby Isaac bn = nextbn; 2179cc48ffa7SToby Isaac recvisfrom = nextrecvisfrom; 2180cc48ffa7SToby Isaac sendbuf = recvbuf; 2181cc48ffa7SToby Isaac } 21829566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 21839566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 21849566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 218567af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 21869566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 21879566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 21883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2189cc48ffa7SToby Isaac } 2190cc48ffa7SToby Isaac 2191d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C) 2192d71ae5a4SJacob Faibussowitsch { 2193faa55883SToby Isaac Mat_MPIDense *a = (Mat_MPIDense *)A->data, *b = (Mat_MPIDense *)B->data, *c = (Mat_MPIDense *)C->data; 21946718818eSStefano Zampini Mat_MatTransMultDense *abt; 2195faa55883SToby Isaac MPI_Comm comm; 2196637a0070SStefano Zampini PetscMPIInt size; 2197637a0070SStefano Zampini PetscScalar *cv, *sendbuf, *recvbuf; 2198637a0070SStefano Zampini const PetscScalar *av, *bv; 2199637a0070SStefano Zampini PetscInt blda, i, cK = A->cmap->N, k, j, bn; 2200faa55883SToby Isaac PetscScalar _DOne = 1.0, _DZero = 0.0; 2201637a0070SStefano Zampini PetscBLASInt cm, cn, ck, alda, clda; 2202faa55883SToby Isaac 2203faa55883SToby Isaac PetscFunctionBegin; 22046718818eSStefano Zampini MatCheckProduct(C, 3); 22055f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 22066718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 22079566063dSJacob Faibussowitsch PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 22089566063dSJacob Faibussowitsch PetscCallMPI(MPI_Comm_size(comm, &size)); 22099566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(a->A, &av)); 22109566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayRead(b->A, &bv)); 22119566063dSJacob Faibussowitsch PetscCall(MatDenseGetArrayWrite(c->A, &cv)); 22129566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(a->A, &i)); 22139566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &alda)); 22149566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(b->A, &blda)); 22159566063dSJacob Faibussowitsch PetscCall(MatDenseGetLDA(c->A, &i)); 22169566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(i, &clda)); 2217faa55883SToby Isaac /* copy transpose of B into buf[0] */ 2218faa55883SToby Isaac bn = B->rmap->n; 2219faa55883SToby Isaac sendbuf = abt->buf[0]; 2220faa55883SToby Isaac recvbuf = abt->buf[1]; 2221faa55883SToby Isaac for (k = 0, j = 0; j < bn; j++) { 2222ad540459SPierre Jolivet for (i = 0; i < cK; i++, k++) sendbuf[k] = bv[i * blda + j]; 2223faa55883SToby Isaac } 22249566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 22259566063dSJacob Faibussowitsch PetscCallMPI(MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm)); 22269566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(cK, &ck)); 22279566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->rmap->n, &cm)); 22289566063dSJacob Faibussowitsch PetscCall(PetscBLASIntCast(c->A->cmap->n, &cn)); 2229792fecdfSBarry Smith if (cm && cn && ck) PetscCallBLAS("BLASgemm", BLASgemm_("N", "N", &cm, &cn, &ck, &_DOne, av, &alda, recvbuf, &ck, &_DZero, cv, &clda)); 22309566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(a->A, &av)); 22319566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayRead(b->A, &bv)); 22329566063dSJacob Faibussowitsch PetscCall(MatDenseRestoreArrayWrite(c->A, &cv)); 223367af85e8SPierre Jolivet PetscCall(MatSetOption(C, MAT_NO_OFF_PROC_ENTRIES, PETSC_TRUE)); 22349566063dSJacob Faibussowitsch PetscCall(MatAssemblyBegin(C, MAT_FINAL_ASSEMBLY)); 22359566063dSJacob Faibussowitsch PetscCall(MatAssemblyEnd(C, MAT_FINAL_ASSEMBLY)); 22363ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2237faa55883SToby Isaac } 2238faa55883SToby Isaac 2239d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2240d71ae5a4SJacob Faibussowitsch { 22416718818eSStefano Zampini Mat_MatTransMultDense *abt; 2242faa55883SToby Isaac 2243faa55883SToby Isaac PetscFunctionBegin; 22446718818eSStefano Zampini MatCheckProduct(C, 3); 22455f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data empty"); 22466718818eSStefano Zampini abt = (Mat_MatTransMultDense *)C->product->data; 2247faa55883SToby Isaac switch (abt->alg) { 2248d71ae5a4SJacob Faibussowitsch case 1: 2249d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C)); 2250d71ae5a4SJacob Faibussowitsch break; 2251d71ae5a4SJacob Faibussowitsch default: 2252d71ae5a4SJacob Faibussowitsch PetscCall(MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C)); 2253d71ae5a4SJacob Faibussowitsch break; 2254faa55883SToby Isaac } 22553ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2256faa55883SToby Isaac } 2257faa55883SToby Isaac 225866976f2fSJacob Faibussowitsch static PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data) 2259d71ae5a4SJacob Faibussowitsch { 22606718818eSStefano Zampini Mat_MatMultDense *ab = (Mat_MatMultDense *)data; 2261320f2790SHong Zhang 2262320f2790SHong Zhang PetscFunctionBegin; 22639566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ce)); 22649566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Ae)); 22659566063dSJacob Faibussowitsch PetscCall(MatDestroy(&ab->Be)); 22669566063dSJacob Faibussowitsch PetscCall(PetscFree(ab)); 22673ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2268320f2790SHong Zhang } 2269320f2790SHong Zhang 22705d8c7819SPierre Jolivet static PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C) 2271d71ae5a4SJacob Faibussowitsch { 22726718818eSStefano Zampini Mat_MatMultDense *ab; 22735d8c7819SPierre Jolivet Mat_MPIDense *mdn = (Mat_MPIDense *)A->data; 2274320f2790SHong Zhang 2275320f2790SHong Zhang PetscFunctionBegin; 22766718818eSStefano Zampini MatCheckProduct(C, 3); 22775f80ce2aSJacob Faibussowitsch PetscCheck(C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Missing product data"); 22786718818eSStefano Zampini ab = (Mat_MatMultDense *)C->product->data; 22795d8c7819SPierre Jolivet if (ab->Ae && ab->Ce) { 22805d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 22819566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(A, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Ae)); 22829566063dSJacob Faibussowitsch PetscCall(MatConvert_MPIDense_Elemental(B, MATELEMENTAL, MAT_REUSE_MATRIX, &ab->Be)); 22839566063dSJacob Faibussowitsch PetscCall(MatMatMultNumeric_Elemental(ab->Ae, ab->Be, ab->Ce)); 22849566063dSJacob Faibussowitsch PetscCall(MatConvert(ab->Ce, MATMPIDENSE, MAT_REUSE_MATRIX, &C)); 22855d8c7819SPierre Jolivet #else 22865d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 22875d8c7819SPierre Jolivet #endif 22885d8c7819SPierre Jolivet } else { 22895d8c7819SPierre Jolivet const PetscScalar *read; 22905d8c7819SPierre Jolivet PetscScalar *write; 22915d8c7819SPierre Jolivet PetscInt lda; 22925d8c7819SPierre Jolivet 22935d8c7819SPierre Jolivet PetscCall(MatDenseGetLDA(B, &lda)); 22945d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayRead(B, &read)); 22955d8c7819SPierre Jolivet PetscCall(MatDenseGetArrayWrite(ab->Be, &write)); 22965d8c7819SPierre Jolivet if (!mdn->Mvctx) PetscCall(MatSetUpMultiply_MPIDense(A)); /* cannot be done during the symbolic phase because of possible calls to MatProductReplaceMats() */ 22975d8c7819SPierre Jolivet for (PetscInt i = 0; i < C->cmap->N; ++i) { 22985d8c7819SPierre Jolivet PetscCall(PetscSFBcastBegin(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 22995d8c7819SPierre Jolivet PetscCall(PetscSFBcastEnd(mdn->Mvctx, MPIU_SCALAR, read + i * lda, write + i * ab->Be->rmap->n, MPI_REPLACE)); 23005d8c7819SPierre Jolivet } 23015d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayWrite(ab->Be, &write)); 23025d8c7819SPierre Jolivet PetscCall(MatDenseRestoreArrayRead(B, &read)); 23035d8c7819SPierre Jolivet PetscCall(MatMatMultNumeric_SeqDense_SeqDense(((Mat_MPIDense *)(A->data))->A, ab->Be, ((Mat_MPIDense *)(C->data))->A)); 23045d8c7819SPierre Jolivet } 23053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2306320f2790SHong Zhang } 2307320f2790SHong Zhang 2308d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C) 2309d71ae5a4SJacob Faibussowitsch { 23105d8c7819SPierre Jolivet Mat_Product *product = C->product; 23115d8c7819SPierre Jolivet PetscInt alg; 2312320f2790SHong Zhang Mat_MatMultDense *ab; 23135d8c7819SPierre Jolivet PetscBool flg; 2314320f2790SHong Zhang 2315320f2790SHong Zhang PetscFunctionBegin; 23166718818eSStefano Zampini MatCheckProduct(C, 4); 23175f80ce2aSJacob Faibussowitsch PetscCheck(!C->product->data, PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "Product data not empty"); 23184222ddf1SHong Zhang /* check local size of A and B */ 23195d8c7819SPierre Jolivet PetscCheck(A->cmap->rstart == B->rmap->rstart && A->cmap->rend == B->rmap->rend, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, A (%" PetscInt_FMT ", %" PetscInt_FMT ") != B (%" PetscInt_FMT ", %" PetscInt_FMT ")", 23205d8c7819SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 2321320f2790SHong Zhang 23225d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "petsc", &flg)); 23235d8c7819SPierre Jolivet alg = flg ? 0 : 1; 23244222ddf1SHong Zhang 23254222ddf1SHong Zhang /* setup C */ 23265d8c7819SPierre Jolivet PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, A->rmap->N, B->cmap->N)); 23275d8c7819SPierre Jolivet PetscCall(MatSetType(C, MATMPIDENSE)); 23289566063dSJacob Faibussowitsch PetscCall(MatSetUp(C)); 2329320f2790SHong Zhang 2330320f2790SHong Zhang /* create data structure for reuse Cdense */ 23319566063dSJacob Faibussowitsch PetscCall(PetscNew(&ab)); 23325d8c7819SPierre Jolivet 23335d8c7819SPierre Jolivet switch (alg) { 23345d8c7819SPierre Jolivet case 1: /* alg: "elemental" */ 23355d8c7819SPierre Jolivet #if PetscDefined(HAVE_ELEMENTAL) 23365d8c7819SPierre Jolivet /* create elemental matrices Ae and Be */ 23375d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)A), &ab->Ae)); 23385d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Ae, PETSC_DECIDE, PETSC_DECIDE, A->rmap->N, A->cmap->N)); 23395d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Ae, MATELEMENTAL)); 23405d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Ae)); 23415d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Ae, MAT_ROW_ORIENTED, PETSC_FALSE)); 23425d8c7819SPierre Jolivet 23435d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)B), &ab->Be)); 23445d8c7819SPierre Jolivet PetscCall(MatSetSizes(ab->Be, PETSC_DECIDE, PETSC_DECIDE, B->rmap->N, B->cmap->N)); 23455d8c7819SPierre Jolivet PetscCall(MatSetType(ab->Be, MATELEMENTAL)); 23465d8c7819SPierre Jolivet PetscCall(MatSetUp(ab->Be)); 23475d8c7819SPierre Jolivet PetscCall(MatSetOption(ab->Be, MAT_ROW_ORIENTED, PETSC_FALSE)); 23485d8c7819SPierre Jolivet 23495d8c7819SPierre Jolivet /* compute symbolic Ce = Ae*Be */ 23505d8c7819SPierre Jolivet PetscCall(MatCreate(PetscObjectComm((PetscObject)C), &ab->Ce)); 23515d8c7819SPierre Jolivet PetscCall(MatMatMultSymbolic_Elemental(ab->Ae, ab->Be, fill, ab->Ce)); 23525d8c7819SPierre Jolivet #else 23535d8c7819SPierre Jolivet SETERRQ(PetscObjectComm((PetscObject)C), PETSC_ERR_PLIB, "PETSC_HAVE_ELEMENTAL not defined"); 23545d8c7819SPierre Jolivet #endif 23555d8c7819SPierre Jolivet break; 23565d8c7819SPierre Jolivet default: /* alg: "petsc" */ 23575d8c7819SPierre Jolivet ab->Ae = NULL; 23585d8c7819SPierre Jolivet PetscCall(MatCreateSeqDense(PETSC_COMM_SELF, A->cmap->N, B->cmap->N, NULL, &ab->Be)); 23595d8c7819SPierre Jolivet ab->Ce = NULL; 23605d8c7819SPierre Jolivet break; 23615d8c7819SPierre Jolivet } 23626718818eSStefano Zampini 23636718818eSStefano Zampini C->product->data = ab; 23646718818eSStefano Zampini C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense; 23654222ddf1SHong Zhang C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense; 23663ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2367320f2790SHong Zhang } 23682ef1f0ffSBarry Smith 2369d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C) 2370d71ae5a4SJacob Faibussowitsch { 23715d8c7819SPierre Jolivet Mat_Product *product = C->product; 23725d8c7819SPierre Jolivet const char *algTypes[2] = {"petsc", "elemental"}; 23735d8c7819SPierre Jolivet PetscInt alg, nalg = PetscDefined(HAVE_ELEMENTAL) ? 2 : 1; 23745d8c7819SPierre Jolivet PetscBool flg = PETSC_FALSE; 2375320f2790SHong Zhang PetscFunctionBegin; 23765d8c7819SPierre Jolivet 23775d8c7819SPierre Jolivet /* Set default algorithm */ 23785d8c7819SPierre Jolivet alg = 0; /* default is petsc */ 23795d8c7819SPierre Jolivet PetscCall(PetscStrcmp(product->alg, "default", &flg)); 23805d8c7819SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 23815d8c7819SPierre Jolivet 23825d8c7819SPierre Jolivet /* Get runtime option */ 23835d8c7819SPierre Jolivet PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_AB", "Mat"); 23845d8c7819SPierre Jolivet PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_AB", algTypes, nalg, algTypes[alg], &alg, &flg)); 23855d8c7819SPierre Jolivet PetscOptionsEnd(); 23865d8c7819SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 23875d8c7819SPierre Jolivet 23884222ddf1SHong Zhang C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense; 23894222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_AB; 23903ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 2391320f2790SHong Zhang } 239286aefd0dSHong Zhang 2393d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C) 2394d71ae5a4SJacob Faibussowitsch { 23954222ddf1SHong Zhang Mat_Product *product = C->product; 23964222ddf1SHong Zhang Mat A = product->A, B = product->B; 23974222ddf1SHong Zhang 23984222ddf1SHong Zhang PetscFunctionBegin; 239907e90273SPierre Jolivet PetscCheck(A->rmap->rstart == B->rmap->rstart && A->rmap->rend == B->rmap->rend, PETSC_COMM_SELF, PETSC_ERR_ARG_SIZ, "Matrix local dimensions are incompatible, (%" PetscInt_FMT ", %" PetscInt_FMT ") != (%" PetscInt_FMT ",%" PetscInt_FMT ")", 240007e90273SPierre Jolivet A->rmap->rstart, A->rmap->rend, B->rmap->rstart, B->rmap->rend); 24016718818eSStefano Zampini C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense; 24026718818eSStefano Zampini C->ops->productsymbolic = MatProductSymbolic_AtB; 24033ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 24044222ddf1SHong Zhang } 24054222ddf1SHong Zhang 2406d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C) 2407d71ae5a4SJacob Faibussowitsch { 24084222ddf1SHong Zhang Mat_Product *product = C->product; 24094222ddf1SHong Zhang const char *algTypes[2] = {"allgatherv", "cyclic"}; 24104222ddf1SHong Zhang PetscInt alg, nalg = 2; 24114222ddf1SHong Zhang PetscBool flg = PETSC_FALSE; 24124222ddf1SHong Zhang 24134222ddf1SHong Zhang PetscFunctionBegin; 24144222ddf1SHong Zhang /* Set default algorithm */ 24154222ddf1SHong Zhang alg = 0; /* default is allgatherv */ 24169566063dSJacob Faibussowitsch PetscCall(PetscStrcmp(product->alg, "default", &flg)); 241748a46eb9SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 24184222ddf1SHong Zhang 24194222ddf1SHong Zhang /* Get runtime option */ 24204222ddf1SHong Zhang if (product->api_user) { 2421d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatMatTransposeMult", "Mat"); 24229566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-matmattransmult_mpidense_mpidense_via", "Algorithmic approach", "MatMatTransposeMult", algTypes, nalg, algTypes[alg], &alg, &flg)); 2423d0609cedSBarry Smith PetscOptionsEnd(); 24244222ddf1SHong Zhang } else { 2425d0609cedSBarry Smith PetscOptionsBegin(PetscObjectComm((PetscObject)C), ((PetscObject)C)->prefix, "MatProduct_ABt", "Mat"); 24269566063dSJacob Faibussowitsch PetscCall(PetscOptionsEList("-mat_product_algorithm", "Algorithmic approach", "MatProduct_ABt", algTypes, nalg, algTypes[alg], &alg, &flg)); 2427d0609cedSBarry Smith PetscOptionsEnd(); 24284222ddf1SHong Zhang } 242948a46eb9SPierre Jolivet if (flg) PetscCall(MatProductSetAlgorithm(C, (MatProductAlgorithm)algTypes[alg])); 24304222ddf1SHong Zhang 24314222ddf1SHong Zhang C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense; 24324222ddf1SHong Zhang C->ops->productsymbolic = MatProductSymbolic_ABt; 24333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 24344222ddf1SHong Zhang } 24354222ddf1SHong Zhang 24365d8c7819SPierre Jolivet static PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C) 2437d71ae5a4SJacob Faibussowitsch { 24384222ddf1SHong Zhang Mat_Product *product = C->product; 24394222ddf1SHong Zhang 24404222ddf1SHong Zhang PetscFunctionBegin; 24414222ddf1SHong Zhang switch (product->type) { 2442d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AB: 2443d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AB(C)); 2444d71ae5a4SJacob Faibussowitsch break; 2445d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AtB: 2446d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_AtB(C)); 2447d71ae5a4SJacob Faibussowitsch break; 2448d71ae5a4SJacob Faibussowitsch case MATPRODUCT_ABt: 2449d71ae5a4SJacob Faibussowitsch PetscCall(MatProductSetFromOptions_MPIDense_ABt(C)); 2450d71ae5a4SJacob Faibussowitsch break; 2451d71ae5a4SJacob Faibussowitsch default: 2452d71ae5a4SJacob Faibussowitsch break; 24534222ddf1SHong Zhang } 24543ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 24554222ddf1SHong Zhang } 2456