xref: /petsc/src/mat/impls/dense/mpi/mpidense.c (revision f5ff9c666c0d37e8a7ec3aa2f8e2aa9e44449bdb)
1be1d678aSKris Buschelman 
2ed3cc1f0SBarry Smith /*
3ed3cc1f0SBarry Smith    Basic functions for basic parallel dense matrices.
4ed3cc1f0SBarry Smith */
5ed3cc1f0SBarry Smith 
6c6db04a5SJed Brown #include <../src/mat/impls/dense/mpi/mpidense.h>    /*I   "petscmat.h"  I*/
78949adfdSHong Zhang #include <../src/mat/impls/aij/mpi/mpiaij.h>
8baa3c1c6SHong Zhang #include <petscblaslapack.h>
98965ea79SLois Curfman McInnes 
10ab92ecdeSBarry Smith /*@
11ab92ecdeSBarry Smith 
12ab92ecdeSBarry Smith       MatDenseGetLocalMatrix - For a MATMPIDENSE or MATSEQDENSE matrix returns the sequential
13ab92ecdeSBarry Smith               matrix that represents the operator. For sequential matrices it returns itself.
14ab92ecdeSBarry Smith 
15ab92ecdeSBarry Smith     Input Parameter:
16ab92ecdeSBarry Smith .      A - the Seq or MPI dense matrix
17ab92ecdeSBarry Smith 
18ab92ecdeSBarry Smith     Output Parameter:
19ab92ecdeSBarry Smith .      B - the inner matrix
20ab92ecdeSBarry Smith 
218e6c10adSSatish Balay     Level: intermediate
228e6c10adSSatish Balay 
23ab92ecdeSBarry Smith @*/
24ab92ecdeSBarry Smith PetscErrorCode MatDenseGetLocalMatrix(Mat A,Mat *B)
25ab92ecdeSBarry Smith {
26ab92ecdeSBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
27ab92ecdeSBarry Smith   PetscErrorCode ierr;
28ace3abfcSBarry Smith   PetscBool      flg;
29ab92ecdeSBarry Smith 
30ab92ecdeSBarry Smith   PetscFunctionBegin;
31d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
32d5ea218eSStefano Zampini   PetscValidPointer(B,2);
33f140bc17SStefano Zampini   ierr = PetscObjectBaseTypeCompare((PetscObject)A,MATMPIDENSE,&flg);CHKERRQ(ierr);
342205254eSKarl Rupp   if (flg) *B = mat->A;
35f140bc17SStefano Zampini   else {
36f140bc17SStefano Zampini     ierr = PetscObjectBaseTypeCompare((PetscObject)A,MATSEQDENSE,&flg);CHKERRQ(ierr);
37f140bc17SStefano Zampini     if (!flg) SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Not for matrix type %s",((PetscObject)A)->type_name);
38f140bc17SStefano Zampini     *B = A;
39f140bc17SStefano Zampini   }
40ab92ecdeSBarry Smith   PetscFunctionReturn(0);
41ab92ecdeSBarry Smith }
42ab92ecdeSBarry Smith 
43a76f77c3SStefano Zampini PetscErrorCode MatCopy_MPIDense(Mat A, Mat B, MatStructure s)
44a76f77c3SStefano Zampini {
45a76f77c3SStefano Zampini   Mat_MPIDense   *Amat = (Mat_MPIDense*)A->data;
46a76f77c3SStefano Zampini   Mat_MPIDense   *Bmat = (Mat_MPIDense*)B->data;
47a76f77c3SStefano Zampini   PetscErrorCode ierr;
48a76f77c3SStefano Zampini 
49a76f77c3SStefano Zampini   PetscFunctionBegin;
50a76f77c3SStefano Zampini   ierr = MatCopy(Amat->A,Bmat->A,s);CHKERRQ(ierr);
51a76f77c3SStefano Zampini   PetscFunctionReturn(0);
52a76f77c3SStefano Zampini }
53a76f77c3SStefano Zampini 
54ba8c8a56SBarry Smith PetscErrorCode MatGetRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
55ba8c8a56SBarry Smith {
56ba8c8a56SBarry Smith   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
57ba8c8a56SBarry Smith   PetscErrorCode ierr;
58d0f46423SBarry Smith   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
59ba8c8a56SBarry Smith 
60ba8c8a56SBarry Smith   PetscFunctionBegin;
61e7e72b3dSBarry Smith   if (row < rstart || row >= rend) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
62ba8c8a56SBarry Smith   lrow = row - rstart;
63ba8c8a56SBarry Smith   ierr = MatGetRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v);CHKERRQ(ierr);
64ba8c8a56SBarry Smith   PetscFunctionReturn(0);
65ba8c8a56SBarry Smith }
66ba8c8a56SBarry Smith 
67637a0070SStefano Zampini PetscErrorCode MatRestoreRow_MPIDense(Mat A,PetscInt row,PetscInt *nz,PetscInt **idx,PetscScalar **v)
68ba8c8a56SBarry Smith {
69637a0070SStefano Zampini   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
70ba8c8a56SBarry Smith   PetscErrorCode ierr;
71637a0070SStefano Zampini   PetscInt       lrow,rstart = A->rmap->rstart,rend = A->rmap->rend;
72ba8c8a56SBarry Smith 
73ba8c8a56SBarry Smith   PetscFunctionBegin;
74637a0070SStefano Zampini   if (row < rstart || row >= rend) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"only local rows");
75637a0070SStefano Zampini   lrow = row - rstart;
76637a0070SStefano Zampini   ierr = MatRestoreRow(mat->A,lrow,nz,(const PetscInt**)idx,(const PetscScalar**)v);CHKERRQ(ierr);
77ba8c8a56SBarry Smith   PetscFunctionReturn(0);
78ba8c8a56SBarry Smith }
79ba8c8a56SBarry Smith 
8011bd1e4dSLisandro Dalcin PetscErrorCode  MatGetDiagonalBlock_MPIDense(Mat A,Mat *a)
810de54da6SSatish Balay {
820de54da6SSatish Balay   Mat_MPIDense   *mdn = (Mat_MPIDense*)A->data;
836849ba73SBarry Smith   PetscErrorCode ierr;
84d0f46423SBarry Smith   PetscInt       m = A->rmap->n,rstart = A->rmap->rstart;
8587828ca2SBarry Smith   PetscScalar    *array;
860de54da6SSatish Balay   MPI_Comm       comm;
874b6ae80fSStefano Zampini   PetscBool      flg;
8811bd1e4dSLisandro Dalcin   Mat            B;
890de54da6SSatish Balay 
900de54da6SSatish Balay   PetscFunctionBegin;
914b6ae80fSStefano Zampini   ierr = MatHasCongruentLayouts(A,&flg);CHKERRQ(ierr);
924b6ae80fSStefano Zampini   if (!flg) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only square matrices supported.");
9311bd1e4dSLisandro Dalcin   ierr = PetscObjectQuery((PetscObject)A,"DiagonalBlock",(PetscObject*)&B);CHKERRQ(ierr);
94616b8fbbSStefano Zampini   if (!B) { /* This should use MatDenseGetSubMatrix (not create), but we would need a call like MatRestoreDiagonalBlock */
954b6ae80fSStefano Zampini 
964b6ae80fSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)mdn->A,MATSEQDENSECUDA,&flg);CHKERRQ(ierr);
974b6ae80fSStefano Zampini     if (flg) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"Not coded for %s. Send an email to petsc-dev@mcs.anl.gov to request this feature",MATSEQDENSECUDA);
980de54da6SSatish Balay     ierr = PetscObjectGetComm((PetscObject)(mdn->A),&comm);CHKERRQ(ierr);
9911bd1e4dSLisandro Dalcin     ierr = MatCreate(comm,&B);CHKERRQ(ierr);
10011bd1e4dSLisandro Dalcin     ierr = MatSetSizes(B,m,m,m,m);CHKERRQ(ierr);
10111bd1e4dSLisandro Dalcin     ierr = MatSetType(B,((PetscObject)mdn->A)->type_name);CHKERRQ(ierr);
1024b6ae80fSStefano Zampini     ierr = MatDenseGetArrayRead(mdn->A,(const PetscScalar**)&array);CHKERRQ(ierr);
10311bd1e4dSLisandro Dalcin     ierr = MatSeqDenseSetPreallocation(B,array+m*rstart);CHKERRQ(ierr);
1044b6ae80fSStefano Zampini     ierr = MatDenseRestoreArrayRead(mdn->A,(const PetscScalar**)&array);CHKERRQ(ierr);
10511bd1e4dSLisandro Dalcin     ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
10611bd1e4dSLisandro Dalcin     ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
10711bd1e4dSLisandro Dalcin     ierr = PetscObjectCompose((PetscObject)A,"DiagonalBlock",(PetscObject)B);CHKERRQ(ierr);
10811bd1e4dSLisandro Dalcin     *a   = B;
10911bd1e4dSLisandro Dalcin     ierr = MatDestroy(&B);CHKERRQ(ierr);
1102205254eSKarl Rupp   } else *a = B;
1110de54da6SSatish Balay   PetscFunctionReturn(0);
1120de54da6SSatish Balay }
1130de54da6SSatish Balay 
11413f74950SBarry Smith PetscErrorCode MatSetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],const PetscScalar v[],InsertMode addv)
1158965ea79SLois Curfman McInnes {
11639b7565bSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)mat->data;
117dfbe8321SBarry Smith   PetscErrorCode ierr;
118d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
119ace3abfcSBarry Smith   PetscBool      roworiented = A->roworiented;
1208965ea79SLois Curfman McInnes 
1213a40ed3dSBarry Smith   PetscFunctionBegin;
1228965ea79SLois Curfman McInnes   for (i=0; i<m; i++) {
1235ef9f2a5SBarry Smith     if (idxm[i] < 0) continue;
124e32f2f54SBarry Smith     if (idxm[i] >= mat->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
1258965ea79SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
1268965ea79SLois Curfman McInnes       row = idxm[i] - rstart;
12739b7565bSBarry Smith       if (roworiented) {
12839b7565bSBarry Smith         ierr = MatSetValues(A->A,1,&row,n,idxn,v+i*n,addv);CHKERRQ(ierr);
1293a40ed3dSBarry Smith       } else {
1308965ea79SLois Curfman McInnes         for (j=0; j<n; j++) {
1315ef9f2a5SBarry Smith           if (idxn[j] < 0) continue;
132e32f2f54SBarry Smith           if (idxn[j] >= mat->cmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
13339b7565bSBarry Smith           ierr = MatSetValues(A->A,1,&row,1,&idxn[j],v+i+j*m,addv);CHKERRQ(ierr);
13439b7565bSBarry Smith         }
1358965ea79SLois Curfman McInnes       }
1362205254eSKarl Rupp     } else if (!A->donotstash) {
1375080c13bSMatthew G Knepley       mat->assembled = PETSC_FALSE;
13839b7565bSBarry Smith       if (roworiented) {
139b400d20cSBarry Smith         ierr = MatStashValuesRow_Private(&mat->stash,idxm[i],n,idxn,v+i*n,PETSC_FALSE);CHKERRQ(ierr);
140d36fbae8SSatish Balay       } else {
141b400d20cSBarry Smith         ierr = MatStashValuesCol_Private(&mat->stash,idxm[i],n,idxn,v+i,m,PETSC_FALSE);CHKERRQ(ierr);
14239b7565bSBarry Smith       }
143b49de8d1SLois Curfman McInnes     }
144b49de8d1SLois Curfman McInnes   }
1453a40ed3dSBarry Smith   PetscFunctionReturn(0);
146b49de8d1SLois Curfman McInnes }
147b49de8d1SLois Curfman McInnes 
14813f74950SBarry Smith PetscErrorCode MatGetValues_MPIDense(Mat mat,PetscInt m,const PetscInt idxm[],PetscInt n,const PetscInt idxn[],PetscScalar v[])
149b49de8d1SLois Curfman McInnes {
150b49de8d1SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
151dfbe8321SBarry Smith   PetscErrorCode ierr;
152d0f46423SBarry Smith   PetscInt       i,j,rstart = mat->rmap->rstart,rend = mat->rmap->rend,row;
153b49de8d1SLois Curfman McInnes 
1543a40ed3dSBarry Smith   PetscFunctionBegin;
155b49de8d1SLois Curfman McInnes   for (i=0; i<m; i++) {
156e32f2f54SBarry Smith     if (idxm[i] < 0) continue; /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative row"); */
157e32f2f54SBarry Smith     if (idxm[i] >= mat->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Row too large");
158b49de8d1SLois Curfman McInnes     if (idxm[i] >= rstart && idxm[i] < rend) {
159b49de8d1SLois Curfman McInnes       row = idxm[i] - rstart;
160b49de8d1SLois Curfman McInnes       for (j=0; j<n; j++) {
161e32f2f54SBarry Smith         if (idxn[j] < 0) continue; /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Negative column"); */
162e7e72b3dSBarry Smith         if (idxn[j] >= mat->cmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_OUTOFRANGE,"Column too large");
163b49de8d1SLois Curfman McInnes         ierr = MatGetValues(mdn->A,1,&row,1,&idxn[j],v+i*n+j);CHKERRQ(ierr);
164b49de8d1SLois Curfman McInnes       }
165e7e72b3dSBarry Smith     } else SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Only local values currently supported");
1668965ea79SLois Curfman McInnes   }
1673a40ed3dSBarry Smith   PetscFunctionReturn(0);
1688965ea79SLois Curfman McInnes }
1698965ea79SLois Curfman McInnes 
17049a6ff4bSBarry Smith static PetscErrorCode MatDenseGetLDA_MPIDense(Mat A,PetscInt *lda)
17149a6ff4bSBarry Smith {
17249a6ff4bSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17349a6ff4bSBarry Smith   PetscErrorCode ierr;
17449a6ff4bSBarry Smith 
17549a6ff4bSBarry Smith   PetscFunctionBegin;
17649a6ff4bSBarry Smith   ierr = MatDenseGetLDA(a->A,lda);CHKERRQ(ierr);
17749a6ff4bSBarry Smith   PetscFunctionReturn(0);
17849a6ff4bSBarry Smith }
17949a6ff4bSBarry Smith 
180ad16ce7aSStefano Zampini static PetscErrorCode MatDenseSetLDA_MPIDense(Mat A,PetscInt lda)
181ad16ce7aSStefano Zampini {
182ad16ce7aSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
18317359960SJose E. Roman   PetscBool      iscuda;
184ad16ce7aSStefano Zampini   PetscErrorCode ierr;
185ad16ce7aSStefano Zampini 
186ad16ce7aSStefano Zampini   PetscFunctionBegin;
18717359960SJose E. Roman   if (!a->A) {
18817359960SJose E. Roman     if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18917359960SJose E. Roman     ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr);
19017359960SJose E. Roman     ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr);
19117359960SJose E. Roman     ierr = MatCreate(PETSC_COMM_SELF,&a->A);CHKERRQ(ierr);
19217359960SJose E. Roman     ierr = PetscLogObjectParent((PetscObject)A,(PetscObject)a->A);CHKERRQ(ierr);
19317359960SJose E. Roman     ierr = MatSetSizes(a->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N);CHKERRQ(ierr);
19417359960SJose E. Roman     ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda);CHKERRQ(ierr);
19517359960SJose E. Roman     ierr = MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE);CHKERRQ(ierr);
19617359960SJose E. Roman   }
197ad16ce7aSStefano Zampini   ierr = MatDenseSetLDA(a->A,lda);CHKERRQ(ierr);
198ad16ce7aSStefano Zampini   PetscFunctionReturn(0);
199ad16ce7aSStefano Zampini }
200ad16ce7aSStefano Zampini 
201637a0070SStefano Zampini static PetscErrorCode MatDenseGetArray_MPIDense(Mat A,PetscScalar **array)
202ff14e315SSatish Balay {
203ff14e315SSatish Balay   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
204dfbe8321SBarry Smith   PetscErrorCode ierr;
205ff14e315SSatish Balay 
2063a40ed3dSBarry Smith   PetscFunctionBegin;
207616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2088c778c55SBarry Smith   ierr = MatDenseGetArray(a->A,array);CHKERRQ(ierr);
2093a40ed3dSBarry Smith   PetscFunctionReturn(0);
210ff14e315SSatish Balay }
211ff14e315SSatish Balay 
212637a0070SStefano Zampini static PetscErrorCode MatDenseGetArrayRead_MPIDense(Mat A,const PetscScalar **array)
2138572280aSBarry Smith {
2148572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2158572280aSBarry Smith   PetscErrorCode ierr;
2168572280aSBarry Smith 
2178572280aSBarry Smith   PetscFunctionBegin;
218616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2198572280aSBarry Smith   ierr = MatDenseGetArrayRead(a->A,array);CHKERRQ(ierr);
2208572280aSBarry Smith   PetscFunctionReturn(0);
2218572280aSBarry Smith }
2228572280aSBarry Smith 
2236947451fSStefano Zampini static PetscErrorCode MatDenseGetArrayWrite_MPIDense(Mat A,PetscScalar **array)
2246947451fSStefano Zampini {
2256947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
2266947451fSStefano Zampini   PetscErrorCode ierr;
2276947451fSStefano Zampini 
2286947451fSStefano Zampini   PetscFunctionBegin;
229616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
2306947451fSStefano Zampini   ierr = MatDenseGetArrayWrite(a->A,array);CHKERRQ(ierr);
2316947451fSStefano Zampini   PetscFunctionReturn(0);
2326947451fSStefano Zampini }
2336947451fSStefano Zampini 
234637a0070SStefano Zampini static PetscErrorCode MatDensePlaceArray_MPIDense(Mat A,const PetscScalar *array)
235d3042a70SBarry Smith {
236d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
237d3042a70SBarry Smith   PetscErrorCode ierr;
238d3042a70SBarry Smith 
239d3042a70SBarry Smith   PetscFunctionBegin;
240616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
241616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
242d3042a70SBarry Smith   ierr = MatDensePlaceArray(a->A,array);CHKERRQ(ierr);
243d3042a70SBarry Smith   PetscFunctionReturn(0);
244d3042a70SBarry Smith }
245d3042a70SBarry Smith 
246d3042a70SBarry Smith static PetscErrorCode MatDenseResetArray_MPIDense(Mat A)
247d3042a70SBarry Smith {
248d3042a70SBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
249d3042a70SBarry Smith   PetscErrorCode ierr;
250d3042a70SBarry Smith 
251d3042a70SBarry Smith   PetscFunctionBegin;
252616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
253616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
254d3042a70SBarry Smith   ierr = MatDenseResetArray(a->A);CHKERRQ(ierr);
255d3042a70SBarry Smith   PetscFunctionReturn(0);
256d3042a70SBarry Smith }
257d3042a70SBarry Smith 
258d5ea218eSStefano Zampini static PetscErrorCode MatDenseReplaceArray_MPIDense(Mat A,const PetscScalar *array)
259d5ea218eSStefano Zampini {
260d5ea218eSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
261d5ea218eSStefano Zampini   PetscErrorCode ierr;
262d5ea218eSStefano Zampini 
263d5ea218eSStefano Zampini   PetscFunctionBegin;
264616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
265616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
266d5ea218eSStefano Zampini   ierr = MatDenseReplaceArray(a->A,array);CHKERRQ(ierr);
267d5ea218eSStefano Zampini   PetscFunctionReturn(0);
268d5ea218eSStefano Zampini }
269d5ea218eSStefano Zampini 
2707dae84e0SHong Zhang static PetscErrorCode MatCreateSubMatrix_MPIDense(Mat A,IS isrow,IS iscol,MatReuse scall,Mat *B)
271ca3fa75bSLois Curfman McInnes {
272ca3fa75bSLois Curfman McInnes   Mat_MPIDense      *mat  = (Mat_MPIDense*)A->data,*newmatd;
2736849ba73SBarry Smith   PetscErrorCode    ierr;
274637a0070SStefano Zampini   PetscInt          lda,i,j,rstart,rend,nrows,ncols,Ncols,nlrows,nlcols;
2755d0c19d7SBarry Smith   const PetscInt    *irow,*icol;
276637a0070SStefano Zampini   const PetscScalar *v;
277637a0070SStefano Zampini   PetscScalar       *bv;
278ca3fa75bSLois Curfman McInnes   Mat               newmat;
2794aa3045dSJed Brown   IS                iscol_local;
28042a884f0SBarry Smith   MPI_Comm          comm_is,comm_mat;
281ca3fa75bSLois Curfman McInnes 
282ca3fa75bSLois Curfman McInnes   PetscFunctionBegin;
28342a884f0SBarry Smith   ierr = PetscObjectGetComm((PetscObject)A,&comm_mat);CHKERRQ(ierr);
28442a884f0SBarry Smith   ierr = PetscObjectGetComm((PetscObject)iscol,&comm_is);CHKERRQ(ierr);
28542a884f0SBarry Smith   if (comm_mat != comm_is) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"IS communicator must match matrix communicator");
28642a884f0SBarry Smith 
2874aa3045dSJed Brown   ierr = ISAllGather(iscol,&iscol_local);CHKERRQ(ierr);
288ca3fa75bSLois Curfman McInnes   ierr = ISGetIndices(isrow,&irow);CHKERRQ(ierr);
2894aa3045dSJed Brown   ierr = ISGetIndices(iscol_local,&icol);CHKERRQ(ierr);
290b9b97703SBarry Smith   ierr = ISGetLocalSize(isrow,&nrows);CHKERRQ(ierr);
291b9b97703SBarry Smith   ierr = ISGetLocalSize(iscol,&ncols);CHKERRQ(ierr);
2924aa3045dSJed Brown   ierr = ISGetSize(iscol,&Ncols);CHKERRQ(ierr); /* global number of columns, size of iscol_local */
293ca3fa75bSLois Curfman McInnes 
294ca3fa75bSLois Curfman McInnes   /* No parallel redistribution currently supported! Should really check each index set
2957eba5e9cSLois Curfman McInnes      to comfirm that it is OK.  ... Currently supports only submatrix same partitioning as
2967eba5e9cSLois Curfman McInnes      original matrix! */
297ca3fa75bSLois Curfman McInnes 
298ca3fa75bSLois Curfman McInnes   ierr = MatGetLocalSize(A,&nlrows,&nlcols);CHKERRQ(ierr);
2997eba5e9cSLois Curfman McInnes   ierr = MatGetOwnershipRange(A,&rstart,&rend);CHKERRQ(ierr);
300ca3fa75bSLois Curfman McInnes 
301ca3fa75bSLois Curfman McInnes   /* Check submatrix call */
302ca3fa75bSLois Curfman McInnes   if (scall == MAT_REUSE_MATRIX) {
303e32f2f54SBarry Smith     /* SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Reused submatrix wrong size"); */
3047eba5e9cSLois Curfman McInnes     /* Really need to test rows and column sizes! */
305ca3fa75bSLois Curfman McInnes     newmat = *B;
306ca3fa75bSLois Curfman McInnes   } else {
307ca3fa75bSLois Curfman McInnes     /* Create and fill new matrix */
308ce94432eSBarry Smith     ierr = MatCreate(PetscObjectComm((PetscObject)A),&newmat);CHKERRQ(ierr);
3094aa3045dSJed Brown     ierr = MatSetSizes(newmat,nrows,ncols,PETSC_DECIDE,Ncols);CHKERRQ(ierr);
3107adad957SLisandro Dalcin     ierr = MatSetType(newmat,((PetscObject)A)->type_name);CHKERRQ(ierr);
3110298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(newmat,NULL);CHKERRQ(ierr);
312ca3fa75bSLois Curfman McInnes   }
313ca3fa75bSLois Curfman McInnes 
314ca3fa75bSLois Curfman McInnes   /* Now extract the data pointers and do the copy, column at a time */
315ca3fa75bSLois Curfman McInnes   newmatd = (Mat_MPIDense*)newmat->data;
316637a0070SStefano Zampini   ierr = MatDenseGetArray(newmatd->A,&bv);CHKERRQ(ierr);
317637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(mat->A,&v);CHKERRQ(ierr);
318637a0070SStefano Zampini   ierr = MatDenseGetLDA(mat->A,&lda);CHKERRQ(ierr);
3194aa3045dSJed Brown   for (i=0; i<Ncols; i++) {
320637a0070SStefano Zampini     const PetscScalar *av = v + lda*icol[i];
321ca3fa75bSLois Curfman McInnes     for (j=0; j<nrows; j++) {
3227eba5e9cSLois Curfman McInnes       *bv++ = av[irow[j] - rstart];
323ca3fa75bSLois Curfman McInnes     }
324ca3fa75bSLois Curfman McInnes   }
325637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(mat->A,&v);CHKERRQ(ierr);
326637a0070SStefano Zampini   ierr = MatDenseRestoreArray(newmatd->A,&bv);CHKERRQ(ierr);
327ca3fa75bSLois Curfman McInnes 
328ca3fa75bSLois Curfman McInnes   /* Assemble the matrices so that the correct flags are set */
329ca3fa75bSLois Curfman McInnes   ierr = MatAssemblyBegin(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
330ca3fa75bSLois Curfman McInnes   ierr = MatAssemblyEnd(newmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
331ca3fa75bSLois Curfman McInnes 
332ca3fa75bSLois Curfman McInnes   /* Free work space */
333ca3fa75bSLois Curfman McInnes   ierr = ISRestoreIndices(isrow,&irow);CHKERRQ(ierr);
3345bdf786aSShri Abhyankar   ierr = ISRestoreIndices(iscol_local,&icol);CHKERRQ(ierr);
33532bb1f2dSLisandro Dalcin   ierr = ISDestroy(&iscol_local);CHKERRQ(ierr);
336ca3fa75bSLois Curfman McInnes   *B   = newmat;
337ca3fa75bSLois Curfman McInnes   PetscFunctionReturn(0);
338ca3fa75bSLois Curfman McInnes }
339ca3fa75bSLois Curfman McInnes 
340637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArray_MPIDense(Mat A,PetscScalar **array)
341ff14e315SSatish Balay {
34273a71a0fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
34373a71a0fSBarry Smith   PetscErrorCode ierr;
34473a71a0fSBarry Smith 
3453a40ed3dSBarry Smith   PetscFunctionBegin;
3468c778c55SBarry Smith   ierr = MatDenseRestoreArray(a->A,array);CHKERRQ(ierr);
3473a40ed3dSBarry Smith   PetscFunctionReturn(0);
348ff14e315SSatish Balay }
349ff14e315SSatish Balay 
350637a0070SStefano Zampini PetscErrorCode MatDenseRestoreArrayRead_MPIDense(Mat A,const PetscScalar **array)
3518572280aSBarry Smith {
3528572280aSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3538572280aSBarry Smith   PetscErrorCode ierr;
3548572280aSBarry Smith 
3558572280aSBarry Smith   PetscFunctionBegin;
3568572280aSBarry Smith   ierr = MatDenseRestoreArrayRead(a->A,array);CHKERRQ(ierr);
3578572280aSBarry Smith   PetscFunctionReturn(0);
3588572280aSBarry Smith }
3598572280aSBarry Smith 
3606947451fSStefano Zampini PetscErrorCode MatDenseRestoreArrayWrite_MPIDense(Mat A,PetscScalar **array)
3616947451fSStefano Zampini {
3626947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
3636947451fSStefano Zampini   PetscErrorCode ierr;
3646947451fSStefano Zampini 
3656947451fSStefano Zampini   PetscFunctionBegin;
3666947451fSStefano Zampini   ierr = MatDenseRestoreArrayWrite(a->A,array);CHKERRQ(ierr);
3676947451fSStefano Zampini   PetscFunctionReturn(0);
3686947451fSStefano Zampini }
3696947451fSStefano Zampini 
370dfbe8321SBarry Smith PetscErrorCode MatAssemblyBegin_MPIDense(Mat mat,MatAssemblyType mode)
3718965ea79SLois Curfman McInnes {
37239ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
373dfbe8321SBarry Smith   PetscErrorCode ierr;
37413f74950SBarry Smith   PetscInt       nstash,reallocs;
3758965ea79SLois Curfman McInnes 
3763a40ed3dSBarry Smith   PetscFunctionBegin;
3774067683fSStefano Zampini   if (mdn->donotstash || mat->nooffprocentries) PetscFunctionReturn(0);
3788965ea79SLois Curfman McInnes 
379d0f46423SBarry Smith   ierr = MatStashScatterBegin_Private(mat,&mat->stash,mat->rmap->range);CHKERRQ(ierr);
3808798bf22SSatish Balay   ierr = MatStashGetInfo_Private(&mat->stash,&nstash,&reallocs);CHKERRQ(ierr);
381ae15b995SBarry Smith   ierr = PetscInfo2(mdn->A,"Stash has %D entries, uses %D mallocs.\n",nstash,reallocs);CHKERRQ(ierr);
3823a40ed3dSBarry Smith   PetscFunctionReturn(0);
3838965ea79SLois Curfman McInnes }
3848965ea79SLois Curfman McInnes 
385dfbe8321SBarry Smith PetscErrorCode MatAssemblyEnd_MPIDense(Mat mat,MatAssemblyType mode)
3868965ea79SLois Curfman McInnes {
38739ddd567SLois Curfman McInnes   Mat_MPIDense   *mdn=(Mat_MPIDense*)mat->data;
3886849ba73SBarry Smith   PetscErrorCode ierr;
38913f74950SBarry Smith   PetscInt       i,*row,*col,flg,j,rstart,ncols;
39013f74950SBarry Smith   PetscMPIInt    n;
39187828ca2SBarry Smith   PetscScalar    *val;
3928965ea79SLois Curfman McInnes 
3933a40ed3dSBarry Smith   PetscFunctionBegin;
394910cf402Sprj-   if (!mdn->donotstash && !mat->nooffprocentries) {
3958965ea79SLois Curfman McInnes     /*  wait on receives */
3967ef1d9bdSSatish Balay     while (1) {
3978798bf22SSatish Balay       ierr = MatStashScatterGetMesg_Private(&mat->stash,&n,&row,&col,&val,&flg);CHKERRQ(ierr);
3987ef1d9bdSSatish Balay       if (!flg) break;
3998965ea79SLois Curfman McInnes 
4007ef1d9bdSSatish Balay       for (i=0; i<n;) {
4017ef1d9bdSSatish Balay         /* Now identify the consecutive vals belonging to the same row */
4022205254eSKarl Rupp         for (j=i,rstart=row[j]; j<n; j++) {
4032205254eSKarl Rupp           if (row[j] != rstart) break;
4042205254eSKarl Rupp         }
4057ef1d9bdSSatish Balay         if (j < n) ncols = j-i;
4067ef1d9bdSSatish Balay         else       ncols = n-i;
4077ef1d9bdSSatish Balay         /* Now assemble all these values with a single function call */
4084b4eb8d3SJed Brown         ierr = MatSetValues_MPIDense(mat,1,row+i,ncols,col+i,val+i,mat->insertmode);CHKERRQ(ierr);
4097ef1d9bdSSatish Balay         i    = j;
4108965ea79SLois Curfman McInnes       }
4117ef1d9bdSSatish Balay     }
4128798bf22SSatish Balay     ierr = MatStashScatterEnd_Private(&mat->stash);CHKERRQ(ierr);
413910cf402Sprj-   }
4148965ea79SLois Curfman McInnes 
41539ddd567SLois Curfman McInnes   ierr = MatAssemblyBegin(mdn->A,mode);CHKERRQ(ierr);
41639ddd567SLois Curfman McInnes   ierr = MatAssemblyEnd(mdn->A,mode);CHKERRQ(ierr);
4178965ea79SLois Curfman McInnes 
4186d4a8577SBarry Smith   if (!mat->was_assembled && mode == MAT_FINAL_ASSEMBLY) {
41939ddd567SLois Curfman McInnes     ierr = MatSetUpMultiply_MPIDense(mat);CHKERRQ(ierr);
4208965ea79SLois Curfman McInnes   }
4213a40ed3dSBarry Smith   PetscFunctionReturn(0);
4228965ea79SLois Curfman McInnes }
4238965ea79SLois Curfman McInnes 
424dfbe8321SBarry Smith PetscErrorCode MatZeroEntries_MPIDense(Mat A)
4258965ea79SLois Curfman McInnes {
426dfbe8321SBarry Smith   PetscErrorCode ierr;
42739ddd567SLois Curfman McInnes   Mat_MPIDense   *l = (Mat_MPIDense*)A->data;
4283a40ed3dSBarry Smith 
4293a40ed3dSBarry Smith   PetscFunctionBegin;
4303a40ed3dSBarry Smith   ierr = MatZeroEntries(l->A);CHKERRQ(ierr);
4313a40ed3dSBarry Smith   PetscFunctionReturn(0);
4328965ea79SLois Curfman McInnes }
4338965ea79SLois Curfman McInnes 
434637a0070SStefano Zampini PetscErrorCode MatZeroRows_MPIDense(Mat A,PetscInt n,const PetscInt rows[],PetscScalar diag,Vec x,Vec b)
4358965ea79SLois Curfman McInnes {
43639ddd567SLois Curfman McInnes   Mat_MPIDense      *l = (Mat_MPIDense*)A->data;
4376849ba73SBarry Smith   PetscErrorCode    ierr;
438637a0070SStefano Zampini   PetscInt          i,len,*lrows;
439637a0070SStefano Zampini 
440637a0070SStefano Zampini   PetscFunctionBegin;
441637a0070SStefano Zampini   /* get locally owned rows */
442637a0070SStefano Zampini   ierr = PetscLayoutMapLocal(A->rmap,n,rows,&len,&lrows,NULL);CHKERRQ(ierr);
443637a0070SStefano Zampini   /* fix right hand side if needed */
444637a0070SStefano Zampini   if (x && b) {
44597b48c8fSBarry Smith     const PetscScalar *xx;
44697b48c8fSBarry Smith     PetscScalar       *bb;
4478965ea79SLois Curfman McInnes 
44897b48c8fSBarry Smith     ierr = VecGetArrayRead(x, &xx);CHKERRQ(ierr);
449637a0070SStefano Zampini     ierr = VecGetArrayWrite(b, &bb);CHKERRQ(ierr);
450637a0070SStefano Zampini     for (i=0;i<len;++i) bb[lrows[i]] = diag*xx[lrows[i]];
45197b48c8fSBarry Smith     ierr = VecRestoreArrayRead(x, &xx);CHKERRQ(ierr);
452637a0070SStefano Zampini     ierr = VecRestoreArrayWrite(b, &bb);CHKERRQ(ierr);
45397b48c8fSBarry Smith   }
454637a0070SStefano Zampini   ierr = MatZeroRows(l->A,len,lrows,0.0,NULL,NULL);CHKERRQ(ierr);
455e2eb51b1SBarry Smith   if (diag != 0.0) {
456637a0070SStefano Zampini     Vec d;
457b9679d65SBarry Smith 
458637a0070SStefano Zampini     ierr = MatCreateVecs(A,NULL,&d);CHKERRQ(ierr);
459637a0070SStefano Zampini     ierr = VecSet(d,diag);CHKERRQ(ierr);
460637a0070SStefano Zampini     ierr = MatDiagonalSet(A,d,INSERT_VALUES);CHKERRQ(ierr);
461637a0070SStefano Zampini     ierr = VecDestroy(&d);CHKERRQ(ierr);
462b9679d65SBarry Smith   }
463606d414cSSatish Balay   ierr = PetscFree(lrows);CHKERRQ(ierr);
4643a40ed3dSBarry Smith   PetscFunctionReturn(0);
4658965ea79SLois Curfman McInnes }
4668965ea79SLois Curfman McInnes 
467cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMult_SeqDense(Mat,Vec,Vec);
468cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultAdd_SeqDense(Mat,Vec,Vec,Vec);
469cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTranspose_SeqDense(Mat,Vec,Vec);
470cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatMultTransposeAdd_SeqDense(Mat,Vec,Vec,Vec);
471cc2e6a90SBarry Smith 
472dfbe8321SBarry Smith PetscErrorCode MatMult_MPIDense(Mat mat,Vec xx,Vec yy)
4738965ea79SLois Curfman McInnes {
47439ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
475dfbe8321SBarry Smith   PetscErrorCode    ierr;
476637a0070SStefano Zampini   const PetscScalar *ax;
477637a0070SStefano Zampini   PetscScalar       *ay;
478d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
479c456f294SBarry Smith 
4803a40ed3dSBarry Smith   PetscFunctionBegin;
481a256111fSJunchao Zhang   ierr = VecGetArrayReadAndMemType(xx,&ax,&axmtype);CHKERRQ(ierr);
482a256111fSJunchao Zhang   ierr = VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype);CHKERRQ(ierr);
483ad227feaSJunchao Zhang   ierr = PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE);CHKERRQ(ierr);
484ad227feaSJunchao Zhang   ierr = PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE);CHKERRQ(ierr);
485a256111fSJunchao Zhang   ierr = VecRestoreArrayAndMemType(mdn->lvec,&ay);CHKERRQ(ierr);
486a256111fSJunchao Zhang   ierr = VecRestoreArrayReadAndMemType(xx,&ax);CHKERRQ(ierr);
487637a0070SStefano Zampini   ierr = (*mdn->A->ops->mult)(mdn->A,mdn->lvec,yy);CHKERRQ(ierr);
4883a40ed3dSBarry Smith   PetscFunctionReturn(0);
4898965ea79SLois Curfman McInnes }
4908965ea79SLois Curfman McInnes 
491dfbe8321SBarry Smith PetscErrorCode MatMultAdd_MPIDense(Mat mat,Vec xx,Vec yy,Vec zz)
4928965ea79SLois Curfman McInnes {
49339ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
494dfbe8321SBarry Smith   PetscErrorCode    ierr;
495637a0070SStefano Zampini   const PetscScalar *ax;
496637a0070SStefano Zampini   PetscScalar       *ay;
497d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
498c456f294SBarry Smith 
4993a40ed3dSBarry Smith   PetscFunctionBegin;
500a256111fSJunchao Zhang   ierr = VecGetArrayReadAndMemType(xx,&ax,&axmtype);CHKERRQ(ierr);
501a256111fSJunchao Zhang   ierr = VecGetArrayAndMemType(mdn->lvec,&ay,&aymtype);CHKERRQ(ierr);
502ad227feaSJunchao Zhang   ierr = PetscSFBcastWithMemTypeBegin(mdn->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPI_REPLACE);CHKERRQ(ierr);
503ad227feaSJunchao Zhang   ierr = PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ax,ay,MPI_REPLACE);CHKERRQ(ierr);
504a256111fSJunchao Zhang   ierr = VecRestoreArrayAndMemType(mdn->lvec,&ay);CHKERRQ(ierr);
505a256111fSJunchao Zhang   ierr = VecRestoreArrayReadAndMemType(xx,&ax);CHKERRQ(ierr);
506637a0070SStefano Zampini   ierr = (*mdn->A->ops->multadd)(mdn->A,mdn->lvec,yy,zz);CHKERRQ(ierr);
5073a40ed3dSBarry Smith   PetscFunctionReturn(0);
5088965ea79SLois Curfman McInnes }
5098965ea79SLois Curfman McInnes 
510dfbe8321SBarry Smith PetscErrorCode MatMultTranspose_MPIDense(Mat A,Vec xx,Vec yy)
511096963f5SLois Curfman McInnes {
512096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
513dfbe8321SBarry Smith   PetscErrorCode    ierr;
514637a0070SStefano Zampini   const PetscScalar *ax;
515637a0070SStefano Zampini   PetscScalar       *ay;
516d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
517096963f5SLois Curfman McInnes 
5183a40ed3dSBarry Smith   PetscFunctionBegin;
519637a0070SStefano Zampini   ierr = VecSet(yy,0.0);CHKERRQ(ierr);
520637a0070SStefano Zampini   ierr = (*a->A->ops->multtranspose)(a->A,xx,a->lvec);CHKERRQ(ierr);
521a256111fSJunchao Zhang   ierr = VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype);CHKERRQ(ierr);
522a256111fSJunchao Zhang   ierr = VecGetArrayAndMemType(yy,&ay,&aymtype);CHKERRQ(ierr);
523d0295fc0SJunchao Zhang   ierr = PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM);CHKERRQ(ierr);
524637a0070SStefano Zampini   ierr = PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM);CHKERRQ(ierr);
525a256111fSJunchao Zhang   ierr = VecRestoreArrayReadAndMemType(a->lvec,&ax);CHKERRQ(ierr);
526a256111fSJunchao Zhang   ierr = VecRestoreArrayAndMemType(yy,&ay);CHKERRQ(ierr);
5273a40ed3dSBarry Smith   PetscFunctionReturn(0);
528096963f5SLois Curfman McInnes }
529096963f5SLois Curfman McInnes 
530dfbe8321SBarry Smith PetscErrorCode MatMultTransposeAdd_MPIDense(Mat A,Vec xx,Vec yy,Vec zz)
531096963f5SLois Curfman McInnes {
532096963f5SLois Curfman McInnes   Mat_MPIDense      *a = (Mat_MPIDense*)A->data;
533dfbe8321SBarry Smith   PetscErrorCode    ierr;
534637a0070SStefano Zampini   const PetscScalar *ax;
535637a0070SStefano Zampini   PetscScalar       *ay;
536d0295fc0SJunchao Zhang   PetscMemType      axmtype,aymtype;
537096963f5SLois Curfman McInnes 
5383a40ed3dSBarry Smith   PetscFunctionBegin;
5393501a2bdSLois Curfman McInnes   ierr = VecCopy(yy,zz);CHKERRQ(ierr);
540637a0070SStefano Zampini   ierr = (*a->A->ops->multtranspose)(a->A,xx,a->lvec);CHKERRQ(ierr);
541a256111fSJunchao Zhang   ierr = VecGetArrayReadAndMemType(a->lvec,&ax,&axmtype);CHKERRQ(ierr);
542a256111fSJunchao Zhang   ierr = VecGetArrayAndMemType(zz,&ay,&aymtype);CHKERRQ(ierr);
543d0295fc0SJunchao Zhang   ierr = PetscSFReduceWithMemTypeBegin(a->Mvctx,MPIU_SCALAR,axmtype,ax,aymtype,ay,MPIU_SUM);CHKERRQ(ierr);
544637a0070SStefano Zampini   ierr = PetscSFReduceEnd(a->Mvctx,MPIU_SCALAR,ax,ay,MPIU_SUM);CHKERRQ(ierr);
545a256111fSJunchao Zhang   ierr = VecRestoreArrayReadAndMemType(a->lvec,&ax);CHKERRQ(ierr);
546a256111fSJunchao Zhang   ierr = VecRestoreArrayAndMemType(zz,&ay);CHKERRQ(ierr);
5473a40ed3dSBarry Smith   PetscFunctionReturn(0);
548096963f5SLois Curfman McInnes }
549096963f5SLois Curfman McInnes 
550dfbe8321SBarry Smith PetscErrorCode MatGetDiagonal_MPIDense(Mat A,Vec v)
5518965ea79SLois Curfman McInnes {
55239ddd567SLois Curfman McInnes   Mat_MPIDense      *a    = (Mat_MPIDense*)A->data;
553dfbe8321SBarry Smith   PetscErrorCode    ierr;
554637a0070SStefano Zampini   PetscInt          lda,len,i,n,m = A->rmap->n,radd;
55587828ca2SBarry Smith   PetscScalar       *x,zero = 0.0;
556637a0070SStefano Zampini   const PetscScalar *av;
557ed3cc1f0SBarry Smith 
5583a40ed3dSBarry Smith   PetscFunctionBegin;
5592dcb1b2aSMatthew Knepley   ierr = VecSet(v,zero);CHKERRQ(ierr);
5601ebc52fbSHong Zhang   ierr = VecGetArray(v,&x);CHKERRQ(ierr);
561096963f5SLois Curfman McInnes   ierr = VecGetSize(v,&n);CHKERRQ(ierr);
562e32f2f54SBarry Smith   if (n != A->rmap->N) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Nonconforming mat and vec");
563d0f46423SBarry Smith   len  = PetscMin(a->A->rmap->n,a->A->cmap->n);
564d0f46423SBarry Smith   radd = A->rmap->rstart*m;
565637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(a->A,&av);CHKERRQ(ierr);
566637a0070SStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
56744cd7ae7SLois Curfman McInnes   for (i=0; i<len; i++) {
568637a0070SStefano Zampini     x[i] = av[radd + i*lda + i];
569096963f5SLois Curfman McInnes   }
570637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,&av);CHKERRQ(ierr);
5711ebc52fbSHong Zhang   ierr = VecRestoreArray(v,&x);CHKERRQ(ierr);
5723a40ed3dSBarry Smith   PetscFunctionReturn(0);
5738965ea79SLois Curfman McInnes }
5748965ea79SLois Curfman McInnes 
575dfbe8321SBarry Smith PetscErrorCode MatDestroy_MPIDense(Mat mat)
5768965ea79SLois Curfman McInnes {
5773501a2bdSLois Curfman McInnes   Mat_MPIDense   *mdn = (Mat_MPIDense*)mat->data;
578dfbe8321SBarry Smith   PetscErrorCode ierr;
579ed3cc1f0SBarry Smith 
5803a40ed3dSBarry Smith   PetscFunctionBegin;
581aa482453SBarry Smith #if defined(PETSC_USE_LOG)
582d0f46423SBarry Smith   PetscLogObjectState((PetscObject)mat,"Rows=%D, Cols=%D",mat->rmap->N,mat->cmap->N);
5838965ea79SLois Curfman McInnes #endif
5848798bf22SSatish Balay   ierr = MatStashDestroy_Private(&mat->stash);CHKERRQ(ierr);
585616b8fbbSStefano Zampini   if (mdn->vecinuse) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
586616b8fbbSStefano Zampini   if (mdn->matinuse) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
5876bf464f9SBarry Smith   ierr = MatDestroy(&mdn->A);CHKERRQ(ierr);
5886bf464f9SBarry Smith   ierr = VecDestroy(&mdn->lvec);CHKERRQ(ierr);
589637a0070SStefano Zampini   ierr = PetscSFDestroy(&mdn->Mvctx);CHKERRQ(ierr);
5906947451fSStefano Zampini   ierr = VecDestroy(&mdn->cvec);CHKERRQ(ierr);
5915ea7661aSPierre Jolivet   ierr = MatDestroy(&mdn->cmat);CHKERRQ(ierr);
59201b82886SBarry Smith 
593bf0cc555SLisandro Dalcin   ierr = PetscFree(mat->data);CHKERRQ(ierr);
594f4259b30SLisandro Dalcin   ierr = PetscObjectChangeTypeName((PetscObject)mat,NULL);CHKERRQ(ierr);
5958baccfbdSHong Zhang 
59649a6ff4bSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",NULL);CHKERRQ(ierr);
597ad16ce7aSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",NULL);CHKERRQ(ierr);
5988baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",NULL);CHKERRQ(ierr);
5998572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",NULL);CHKERRQ(ierr);
6008572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",NULL);CHKERRQ(ierr);
6018572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",NULL);CHKERRQ(ierr);
6026947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",NULL);CHKERRQ(ierr);
6036947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",NULL);CHKERRQ(ierr);
604d3042a70SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",NULL);CHKERRQ(ierr);
605d3042a70SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",NULL);CHKERRQ(ierr);
606d5ea218eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",NULL);CHKERRQ(ierr);
6074e29119aSPierre Jolivet   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpiaij_mpidense_C",NULL);CHKERRQ(ierr);
6084e29119aSPierre Jolivet   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpiaij_C",NULL);CHKERRQ(ierr);
6098baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
6108baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",NULL);CHKERRQ(ierr);
6118baccfbdSHong Zhang #endif
612d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
613d24d4204SJose E. Roman   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",NULL);CHKERRQ(ierr);
614d24d4204SJose E. Roman #endif
615bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",NULL);CHKERRQ(ierr);
6164222ddf1SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",NULL);CHKERRQ(ierr);
6174222ddf1SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",NULL);CHKERRQ(ierr);
6186718818eSStefano Zampini #if defined (PETSC_HAVE_CUDA)
6196718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",NULL);CHKERRQ(ierr);
6206718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",NULL);CHKERRQ(ierr);
6216718818eSStefano Zampini #endif
62286aefd0dSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",NULL);CHKERRQ(ierr);
62386aefd0dSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",NULL);CHKERRQ(ierr);
6246947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",NULL);CHKERRQ(ierr);
6256947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",NULL);CHKERRQ(ierr);
6266947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",NULL);CHKERRQ(ierr);
6276947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",NULL);CHKERRQ(ierr);
6286947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",NULL);CHKERRQ(ierr);
6296947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",NULL);CHKERRQ(ierr);
6305ea7661aSPierre Jolivet   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",NULL);CHKERRQ(ierr);
6315ea7661aSPierre Jolivet   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",NULL);CHKERRQ(ierr);
6323a40ed3dSBarry Smith   PetscFunctionReturn(0);
6338965ea79SLois Curfman McInnes }
63439ddd567SLois Curfman McInnes 
63552c5f739Sprj- PETSC_INTERN PetscErrorCode MatView_SeqDense(Mat,PetscViewer);
63652c5f739Sprj- 
6379804daf3SBarry Smith #include <petscdraw.h>
6386849ba73SBarry Smith static PetscErrorCode MatView_MPIDense_ASCIIorDraworSocket(Mat mat,PetscViewer viewer)
6398965ea79SLois Curfman McInnes {
64039ddd567SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)mat->data;
641dfbe8321SBarry Smith   PetscErrorCode    ierr;
642616b8fbbSStefano Zampini   PetscMPIInt       rank;
64319fd82e9SBarry Smith   PetscViewerType   vtype;
644ace3abfcSBarry Smith   PetscBool         iascii,isdraw;
645b0a32e0cSBarry Smith   PetscViewer       sviewer;
646f3ef73ceSBarry Smith   PetscViewerFormat format;
6478965ea79SLois Curfman McInnes 
6483a40ed3dSBarry Smith   PetscFunctionBegin;
649ffc4695bSBarry Smith   ierr = MPI_Comm_rank(PetscObjectComm((PetscObject)mat),&rank);CHKERRMPI(ierr);
650251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
651251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr);
65232077d6dSBarry Smith   if (iascii) {
653b0a32e0cSBarry Smith     ierr = PetscViewerGetType(viewer,&vtype);CHKERRQ(ierr);
654b0a32e0cSBarry Smith     ierr = PetscViewerGetFormat(viewer,&format);CHKERRQ(ierr);
655456192e2SBarry Smith     if (format == PETSC_VIEWER_ASCII_INFO_DETAIL) {
6564e220ebcSLois Curfman McInnes       MatInfo info;
657888f2ed8SSatish Balay       ierr = MatGetInfo(mat,MAT_LOCAL,&info);CHKERRQ(ierr);
6581575c14dSBarry Smith       ierr = PetscViewerASCIIPushSynchronized(viewer);CHKERRQ(ierr);
6597b23a99aSBarry Smith       ierr = PetscViewerASCIISynchronizedPrintf(viewer,"  [%d] local rows %D nz %D nz alloced %D mem %D \n",rank,mat->rmap->n,(PetscInt)info.nz_used,(PetscInt)info.nz_allocated,(PetscInt)info.memory);CHKERRQ(ierr);
660b0a32e0cSBarry Smith       ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
6611575c14dSBarry Smith       ierr = PetscViewerASCIIPopSynchronized(viewer);CHKERRQ(ierr);
662637a0070SStefano Zampini       ierr = PetscSFView(mdn->Mvctx,viewer);CHKERRQ(ierr);
6633a40ed3dSBarry Smith       PetscFunctionReturn(0);
664fb9695e5SSatish Balay     } else if (format == PETSC_VIEWER_ASCII_INFO) {
6653a40ed3dSBarry Smith       PetscFunctionReturn(0);
6668965ea79SLois Curfman McInnes     }
667f1af5d2fSBarry Smith   } else if (isdraw) {
668b0a32e0cSBarry Smith     PetscDraw draw;
669ace3abfcSBarry Smith     PetscBool isnull;
670f1af5d2fSBarry Smith 
671b0a32e0cSBarry Smith     ierr = PetscViewerDrawGetDraw(viewer,0,&draw);CHKERRQ(ierr);
672b0a32e0cSBarry Smith     ierr = PetscDrawIsNull(draw,&isnull);CHKERRQ(ierr);
673f1af5d2fSBarry Smith     if (isnull) PetscFunctionReturn(0);
674f1af5d2fSBarry Smith   }
67577ed5343SBarry Smith 
6767da1fb6eSBarry Smith   {
6778965ea79SLois Curfman McInnes     /* assemble the entire matrix onto first processor. */
6788965ea79SLois Curfman McInnes     Mat         A;
679d0f46423SBarry Smith     PetscInt    M = mat->rmap->N,N = mat->cmap->N,m,row,i,nz;
680ba8c8a56SBarry Smith     PetscInt    *cols;
681ba8c8a56SBarry Smith     PetscScalar *vals;
6828965ea79SLois Curfman McInnes 
683ce94432eSBarry Smith     ierr = MatCreate(PetscObjectComm((PetscObject)mat),&A);CHKERRQ(ierr);
6848965ea79SLois Curfman McInnes     if (!rank) {
685f69a0ea3SMatthew Knepley       ierr = MatSetSizes(A,M,N,M,N);CHKERRQ(ierr);
6863a40ed3dSBarry Smith     } else {
687f69a0ea3SMatthew Knepley       ierr = MatSetSizes(A,0,0,M,N);CHKERRQ(ierr);
6888965ea79SLois Curfman McInnes     }
6897adad957SLisandro Dalcin     /* Since this is a temporary matrix, MATMPIDENSE instead of ((PetscObject)A)->type_name here is probably acceptable. */
690878740d9SKris Buschelman     ierr = MatSetType(A,MATMPIDENSE);CHKERRQ(ierr);
6910298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(A,NULL);CHKERRQ(ierr);
6923bb1ff40SBarry Smith     ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)A);CHKERRQ(ierr);
6938965ea79SLois Curfman McInnes 
69439ddd567SLois Curfman McInnes     /* Copy the matrix ... This isn't the most efficient means,
69539ddd567SLois Curfman McInnes        but it's quick for now */
69651022da4SBarry Smith     A->insertmode = INSERT_VALUES;
6972205254eSKarl Rupp 
6982205254eSKarl Rupp     row = mat->rmap->rstart;
6992205254eSKarl Rupp     m   = mdn->A->rmap->n;
7008965ea79SLois Curfman McInnes     for (i=0; i<m; i++) {
701ba8c8a56SBarry Smith       ierr = MatGetRow_MPIDense(mat,row,&nz,&cols,&vals);CHKERRQ(ierr);
702ba8c8a56SBarry Smith       ierr = MatSetValues_MPIDense(A,1,&row,nz,cols,vals,INSERT_VALUES);CHKERRQ(ierr);
703ba8c8a56SBarry Smith       ierr = MatRestoreRow_MPIDense(mat,row,&nz,&cols,&vals);CHKERRQ(ierr);
70439ddd567SLois Curfman McInnes       row++;
7058965ea79SLois Curfman McInnes     }
7068965ea79SLois Curfman McInnes 
7076d4a8577SBarry Smith     ierr = MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
7086d4a8577SBarry Smith     ierr = MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
7093f08860eSBarry Smith     ierr = PetscViewerGetSubViewer(viewer,PETSC_COMM_SELF,&sviewer);CHKERRQ(ierr);
710b9b97703SBarry Smith     if (!rank) {
7111a9d3c3cSBarry Smith       ierr = PetscObjectSetName((PetscObject)((Mat_MPIDense*)(A->data))->A,((PetscObject)mat)->name);CHKERRQ(ierr);
7127da1fb6eSBarry Smith       ierr = MatView_SeqDense(((Mat_MPIDense*)(A->data))->A,sviewer);CHKERRQ(ierr);
7138965ea79SLois Curfman McInnes     }
7143f08860eSBarry Smith     ierr = PetscViewerRestoreSubViewer(viewer,PETSC_COMM_SELF,&sviewer);CHKERRQ(ierr);
715b0a32e0cSBarry Smith     ierr = PetscViewerFlush(viewer);CHKERRQ(ierr);
7166bf464f9SBarry Smith     ierr = MatDestroy(&A);CHKERRQ(ierr);
7178965ea79SLois Curfman McInnes   }
7183a40ed3dSBarry Smith   PetscFunctionReturn(0);
7198965ea79SLois Curfman McInnes }
7208965ea79SLois Curfman McInnes 
721dfbe8321SBarry Smith PetscErrorCode MatView_MPIDense(Mat mat,PetscViewer viewer)
7228965ea79SLois Curfman McInnes {
723dfbe8321SBarry Smith   PetscErrorCode ierr;
724ace3abfcSBarry Smith   PetscBool      iascii,isbinary,isdraw,issocket;
7258965ea79SLois Curfman McInnes 
726433994e6SBarry Smith   PetscFunctionBegin;
727251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);CHKERRQ(ierr);
728251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr);
729251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERSOCKET,&issocket);CHKERRQ(ierr);
730251f4c67SDmitry Karpeev   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERDRAW,&isdraw);CHKERRQ(ierr);
7310f5bd95cSBarry Smith 
73232077d6dSBarry Smith   if (iascii || issocket || isdraw) {
733f1af5d2fSBarry Smith     ierr = MatView_MPIDense_ASCIIorDraworSocket(mat,viewer);CHKERRQ(ierr);
7340f5bd95cSBarry Smith   } else if (isbinary) {
7358491ab44SLisandro Dalcin     ierr = MatView_Dense_Binary(mat,viewer);CHKERRQ(ierr);
73611aeaf0aSBarry Smith   }
7373a40ed3dSBarry Smith   PetscFunctionReturn(0);
7388965ea79SLois Curfman McInnes }
7398965ea79SLois Curfman McInnes 
740dfbe8321SBarry Smith PetscErrorCode MatGetInfo_MPIDense(Mat A,MatInfoType flag,MatInfo *info)
7418965ea79SLois Curfman McInnes {
7423501a2bdSLois Curfman McInnes   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
7433501a2bdSLois Curfman McInnes   Mat            mdn  = mat->A;
744dfbe8321SBarry Smith   PetscErrorCode ierr;
7453966268fSBarry Smith   PetscLogDouble isend[5],irecv[5];
7468965ea79SLois Curfman McInnes 
7473a40ed3dSBarry Smith   PetscFunctionBegin;
7484e220ebcSLois Curfman McInnes   info->block_size = 1.0;
7492205254eSKarl Rupp 
7504e220ebcSLois Curfman McInnes   ierr = MatGetInfo(mdn,MAT_LOCAL,info);CHKERRQ(ierr);
7512205254eSKarl Rupp 
7524e220ebcSLois Curfman McInnes   isend[0] = info->nz_used; isend[1] = info->nz_allocated; isend[2] = info->nz_unneeded;
7534e220ebcSLois Curfman McInnes   isend[3] = info->memory;  isend[4] = info->mallocs;
7548965ea79SLois Curfman McInnes   if (flag == MAT_LOCAL) {
7554e220ebcSLois Curfman McInnes     info->nz_used      = isend[0];
7564e220ebcSLois Curfman McInnes     info->nz_allocated = isend[1];
7574e220ebcSLois Curfman McInnes     info->nz_unneeded  = isend[2];
7584e220ebcSLois Curfman McInnes     info->memory       = isend[3];
7594e220ebcSLois Curfman McInnes     info->mallocs      = isend[4];
7608965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_MAX) {
7613966268fSBarry Smith     ierr = MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_MAX,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
7622205254eSKarl Rupp 
7634e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7644e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7654e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7664e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7674e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7688965ea79SLois Curfman McInnes   } else if (flag == MAT_GLOBAL_SUM) {
7693966268fSBarry Smith     ierr = MPIU_Allreduce(isend,irecv,5,MPIU_PETSCLOGDOUBLE,MPI_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
7702205254eSKarl Rupp 
7714e220ebcSLois Curfman McInnes     info->nz_used      = irecv[0];
7724e220ebcSLois Curfman McInnes     info->nz_allocated = irecv[1];
7734e220ebcSLois Curfman McInnes     info->nz_unneeded  = irecv[2];
7744e220ebcSLois Curfman McInnes     info->memory       = irecv[3];
7754e220ebcSLois Curfman McInnes     info->mallocs      = irecv[4];
7768965ea79SLois Curfman McInnes   }
7774e220ebcSLois Curfman McInnes   info->fill_ratio_given  = 0; /* no parallel LU/ILU/Cholesky */
7784e220ebcSLois Curfman McInnes   info->fill_ratio_needed = 0;
7794e220ebcSLois Curfman McInnes   info->factor_mallocs    = 0;
7803a40ed3dSBarry Smith   PetscFunctionReturn(0);
7818965ea79SLois Curfman McInnes }
7828965ea79SLois Curfman McInnes 
783ace3abfcSBarry Smith PetscErrorCode MatSetOption_MPIDense(Mat A,MatOption op,PetscBool flg)
7848965ea79SLois Curfman McInnes {
78539ddd567SLois Curfman McInnes   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
786dfbe8321SBarry Smith   PetscErrorCode ierr;
7878965ea79SLois Curfman McInnes 
7883a40ed3dSBarry Smith   PetscFunctionBegin;
78912c028f9SKris Buschelman   switch (op) {
790512a5fc5SBarry Smith   case MAT_NEW_NONZERO_LOCATIONS:
79112c028f9SKris Buschelman   case MAT_NEW_NONZERO_LOCATION_ERR:
79212c028f9SKris Buschelman   case MAT_NEW_NONZERO_ALLOCATION_ERR:
79343674050SBarry Smith     MatCheckPreallocated(A,1);
7944e0d8c25SBarry Smith     ierr = MatSetOption(a->A,op,flg);CHKERRQ(ierr);
79512c028f9SKris Buschelman     break;
79612c028f9SKris Buschelman   case MAT_ROW_ORIENTED:
79743674050SBarry Smith     MatCheckPreallocated(A,1);
7984e0d8c25SBarry Smith     a->roworiented = flg;
7994e0d8c25SBarry Smith     ierr = MatSetOption(a->A,op,flg);CHKERRQ(ierr);
80012c028f9SKris Buschelman     break;
8018c78258cSHong Zhang   case MAT_FORCE_DIAGONAL_ENTRIES:
80213fa8e87SLisandro Dalcin   case MAT_KEEP_NONZERO_PATTERN:
80312c028f9SKris Buschelman   case MAT_USE_HASH_TABLE:
804071fcb05SBarry Smith   case MAT_SORTED_FULL:
805290bbb0aSBarry Smith     ierr = PetscInfo1(A,"Option %s ignored\n",MatOptions[op]);CHKERRQ(ierr);
80612c028f9SKris Buschelman     break;
80712c028f9SKris Buschelman   case MAT_IGNORE_OFF_PROC_ENTRIES:
8084e0d8c25SBarry Smith     a->donotstash = flg;
80912c028f9SKris Buschelman     break;
81077e54ba9SKris Buschelman   case MAT_SYMMETRIC:
81177e54ba9SKris Buschelman   case MAT_STRUCTURALLY_SYMMETRIC:
8129a4540c5SBarry Smith   case MAT_HERMITIAN:
8139a4540c5SBarry Smith   case MAT_SYMMETRY_ETERNAL:
814600fe468SBarry Smith   case MAT_IGNORE_LOWER_TRIANGULAR:
8155d7aebe8SStefano Zampini   case MAT_IGNORE_ZERO_ENTRIES:
816290bbb0aSBarry Smith     ierr = PetscInfo1(A,"Option %s ignored\n",MatOptions[op]);CHKERRQ(ierr);
81777e54ba9SKris Buschelman     break;
81812c028f9SKris Buschelman   default:
819e32f2f54SBarry Smith     SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_SUP,"unknown option %s",MatOptions[op]);
8203a40ed3dSBarry Smith   }
8213a40ed3dSBarry Smith   PetscFunctionReturn(0);
8228965ea79SLois Curfman McInnes }
8238965ea79SLois Curfman McInnes 
824dfbe8321SBarry Smith PetscErrorCode MatDiagonalScale_MPIDense(Mat A,Vec ll,Vec rr)
8255b2fa520SLois Curfman McInnes {
8265b2fa520SLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
827637a0070SStefano Zampini   const PetscScalar *l;
828637a0070SStefano Zampini   PetscScalar       x,*v,*vv,*r;
829dfbe8321SBarry Smith   PetscErrorCode    ierr;
830637a0070SStefano Zampini   PetscInt          i,j,s2a,s3a,s2,s3,m=mdn->A->rmap->n,n=mdn->A->cmap->n,lda;
8315b2fa520SLois Curfman McInnes 
8325b2fa520SLois Curfman McInnes   PetscFunctionBegin;
833637a0070SStefano Zampini   ierr = MatDenseGetArray(mdn->A,&vv);CHKERRQ(ierr);
834637a0070SStefano Zampini   ierr = MatDenseGetLDA(mdn->A,&lda);CHKERRQ(ierr);
83572d926a5SLois Curfman McInnes   ierr = MatGetLocalSize(A,&s2,&s3);CHKERRQ(ierr);
8365b2fa520SLois Curfman McInnes   if (ll) {
83772d926a5SLois Curfman McInnes     ierr = VecGetLocalSize(ll,&s2a);CHKERRQ(ierr);
838637a0070SStefano Zampini     if (s2a != s2) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Left scaling vector non-conforming local size, %D != %D", s2a, s2);
839bca11509SBarry Smith     ierr = VecGetArrayRead(ll,&l);CHKERRQ(ierr);
8405b2fa520SLois Curfman McInnes     for (i=0; i<m; i++) {
8415b2fa520SLois Curfman McInnes       x = l[i];
842637a0070SStefano Zampini       v = vv + i;
843637a0070SStefano Zampini       for (j=0; j<n; j++) { (*v) *= x; v+= lda;}
8445b2fa520SLois Curfman McInnes     }
845bca11509SBarry Smith     ierr = VecRestoreArrayRead(ll,&l);CHKERRQ(ierr);
846637a0070SStefano Zampini     ierr = PetscLogFlops(1.0*n*m);CHKERRQ(ierr);
8475b2fa520SLois Curfman McInnes   }
8485b2fa520SLois Curfman McInnes   if (rr) {
849637a0070SStefano Zampini     const PetscScalar *ar;
850637a0070SStefano Zampini 
851175be7b4SMatthew Knepley     ierr = VecGetLocalSize(rr,&s3a);CHKERRQ(ierr);
852e32f2f54SBarry Smith     if (s3a != s3) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Right scaling vec non-conforming local size, %d != %d.", s3a, s3);
853637a0070SStefano Zampini     ierr = VecGetArrayRead(rr,&ar);CHKERRQ(ierr);
854637a0070SStefano Zampini     ierr = VecGetArray(mdn->lvec,&r);CHKERRQ(ierr);
855ad227feaSJunchao Zhang     ierr = PetscSFBcastBegin(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE);CHKERRQ(ierr);
856ad227feaSJunchao Zhang     ierr = PetscSFBcastEnd(mdn->Mvctx,MPIU_SCALAR,ar,r,MPI_REPLACE);CHKERRQ(ierr);
857637a0070SStefano Zampini     ierr = VecRestoreArrayRead(rr,&ar);CHKERRQ(ierr);
8585b2fa520SLois Curfman McInnes     for (i=0; i<n; i++) {
8595b2fa520SLois Curfman McInnes       x = r[i];
860637a0070SStefano Zampini       v = vv + i*lda;
8612205254eSKarl Rupp       for (j=0; j<m; j++) (*v++) *= x;
8625b2fa520SLois Curfman McInnes     }
863637a0070SStefano Zampini     ierr = VecRestoreArray(mdn->lvec,&r);CHKERRQ(ierr);
864637a0070SStefano Zampini     ierr = PetscLogFlops(1.0*n*m);CHKERRQ(ierr);
8655b2fa520SLois Curfman McInnes   }
866637a0070SStefano Zampini   ierr = MatDenseRestoreArray(mdn->A,&vv);CHKERRQ(ierr);
8675b2fa520SLois Curfman McInnes   PetscFunctionReturn(0);
8685b2fa520SLois Curfman McInnes }
8695b2fa520SLois Curfman McInnes 
870dfbe8321SBarry Smith PetscErrorCode MatNorm_MPIDense(Mat A,NormType type,PetscReal *nrm)
871096963f5SLois Curfman McInnes {
8723501a2bdSLois Curfman McInnes   Mat_MPIDense      *mdn = (Mat_MPIDense*)A->data;
873dfbe8321SBarry Smith   PetscErrorCode    ierr;
87413f74950SBarry Smith   PetscInt          i,j;
875616b8fbbSStefano Zampini   PetscMPIInt       size;
876329f5518SBarry Smith   PetscReal         sum = 0.0;
877637a0070SStefano Zampini   const PetscScalar *av,*v;
8783501a2bdSLois Curfman McInnes 
8793a40ed3dSBarry Smith   PetscFunctionBegin;
880637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(mdn->A,&av);CHKERRQ(ierr);
881637a0070SStefano Zampini   v    = av;
882ffc4695bSBarry Smith   ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRMPI(ierr);
883616b8fbbSStefano Zampini   if (size == 1) {
884064f8208SBarry Smith     ierr = MatNorm(mdn->A,type,nrm);CHKERRQ(ierr);
8853501a2bdSLois Curfman McInnes   } else {
8863501a2bdSLois Curfman McInnes     if (type == NORM_FROBENIUS) {
887d0f46423SBarry Smith       for (i=0; i<mdn->A->cmap->n*mdn->A->rmap->n; i++) {
888329f5518SBarry Smith         sum += PetscRealPart(PetscConj(*v)*(*v)); v++;
8893501a2bdSLois Curfman McInnes       }
890b2566f29SBarry Smith       ierr = MPIU_Allreduce(&sum,nrm,1,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
8918f1a2a5eSBarry Smith       *nrm = PetscSqrtReal(*nrm);
892dc0b31edSSatish Balay       ierr = PetscLogFlops(2.0*mdn->A->cmap->n*mdn->A->rmap->n);CHKERRQ(ierr);
8933a40ed3dSBarry Smith     } else if (type == NORM_1) {
894329f5518SBarry Smith       PetscReal *tmp,*tmp2;
895580bdb30SBarry Smith       ierr = PetscCalloc2(A->cmap->N,&tmp,A->cmap->N,&tmp2);CHKERRQ(ierr);
896064f8208SBarry Smith       *nrm = 0.0;
897637a0070SStefano Zampini       v    = av;
898d0f46423SBarry Smith       for (j=0; j<mdn->A->cmap->n; j++) {
899d0f46423SBarry Smith         for (i=0; i<mdn->A->rmap->n; i++) {
90067e560aaSBarry Smith           tmp[j] += PetscAbsScalar(*v);  v++;
9013501a2bdSLois Curfman McInnes         }
9023501a2bdSLois Curfman McInnes       }
903b2566f29SBarry Smith       ierr = MPIU_Allreduce(tmp,tmp2,A->cmap->N,MPIU_REAL,MPIU_SUM,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
904d0f46423SBarry Smith       for (j=0; j<A->cmap->N; j++) {
905064f8208SBarry Smith         if (tmp2[j] > *nrm) *nrm = tmp2[j];
9063501a2bdSLois Curfman McInnes       }
9078627564fSBarry Smith       ierr = PetscFree2(tmp,tmp2);CHKERRQ(ierr);
908d0f46423SBarry Smith       ierr = PetscLogFlops(A->cmap->n*A->rmap->n);CHKERRQ(ierr);
9093a40ed3dSBarry Smith     } else if (type == NORM_INFINITY) { /* max row norm */
910329f5518SBarry Smith       PetscReal ntemp;
9113501a2bdSLois Curfman McInnes       ierr = MatNorm(mdn->A,type,&ntemp);CHKERRQ(ierr);
912b2566f29SBarry Smith       ierr = MPIU_Allreduce(&ntemp,nrm,1,MPIU_REAL,MPIU_MAX,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
913ce94432eSBarry Smith     } else SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"No support for two norm");
9143501a2bdSLois Curfman McInnes   }
915637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(mdn->A,&av);CHKERRQ(ierr);
9163a40ed3dSBarry Smith   PetscFunctionReturn(0);
9173501a2bdSLois Curfman McInnes }
9183501a2bdSLois Curfman McInnes 
919fc4dec0aSBarry Smith PetscErrorCode MatTranspose_MPIDense(Mat A,MatReuse reuse,Mat *matout)
9203501a2bdSLois Curfman McInnes {
9213501a2bdSLois Curfman McInnes   Mat_MPIDense   *a    = (Mat_MPIDense*)A->data;
9223501a2bdSLois Curfman McInnes   Mat            B;
923d0f46423SBarry Smith   PetscInt       M = A->rmap->N,N = A->cmap->N,m,n,*rwork,rstart = A->rmap->rstart;
9246849ba73SBarry Smith   PetscErrorCode ierr;
925637a0070SStefano Zampini   PetscInt       j,i,lda;
92687828ca2SBarry Smith   PetscScalar    *v;
9273501a2bdSLois Curfman McInnes 
9283a40ed3dSBarry Smith   PetscFunctionBegin;
929cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_INPLACE_MATRIX) {
930ce94432eSBarry Smith     ierr = MatCreate(PetscObjectComm((PetscObject)A),&B);CHKERRQ(ierr);
931d0f46423SBarry Smith     ierr = MatSetSizes(B,A->cmap->n,A->rmap->n,N,M);CHKERRQ(ierr);
9327adad957SLisandro Dalcin     ierr = MatSetType(B,((PetscObject)A)->type_name);CHKERRQ(ierr);
9330298fd71SBarry Smith     ierr = MatMPIDenseSetPreallocation(B,NULL);CHKERRQ(ierr);
934637a0070SStefano Zampini   } else B = *matout;
9353501a2bdSLois Curfman McInnes 
936637a0070SStefano Zampini   m    = a->A->rmap->n; n = a->A->cmap->n;
937637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(a->A,(const PetscScalar**)&v);CHKERRQ(ierr);
938637a0070SStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
939785e854fSJed Brown   ierr = PetscMalloc1(m,&rwork);CHKERRQ(ierr);
9403501a2bdSLois Curfman McInnes   for (i=0; i<m; i++) rwork[i] = rstart + i;
9411acff37aSSatish Balay   for (j=0; j<n; j++) {
9423501a2bdSLois Curfman McInnes     ierr = MatSetValues(B,1,&j,m,rwork,v,INSERT_VALUES);CHKERRQ(ierr);
943637a0070SStefano Zampini     v   += lda;
9443501a2bdSLois Curfman McInnes   }
945637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,(const PetscScalar**)&v);CHKERRQ(ierr);
946606d414cSSatish Balay   ierr = PetscFree(rwork);CHKERRQ(ierr);
9476d4a8577SBarry Smith   ierr = MatAssemblyBegin(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
9486d4a8577SBarry Smith   ierr = MatAssemblyEnd(B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
949cf37664fSBarry Smith   if (reuse == MAT_INITIAL_MATRIX || reuse == MAT_REUSE_MATRIX) {
9503501a2bdSLois Curfman McInnes     *matout = B;
9513501a2bdSLois Curfman McInnes   } else {
95228be2f97SBarry Smith     ierr = MatHeaderMerge(A,&B);CHKERRQ(ierr);
9533501a2bdSLois Curfman McInnes   }
9543a40ed3dSBarry Smith   PetscFunctionReturn(0);
955096963f5SLois Curfman McInnes }
956096963f5SLois Curfman McInnes 
9576849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat,MatDuplicateOption,Mat*);
95852c5f739Sprj- PETSC_INTERN PetscErrorCode MatScale_MPIDense(Mat,PetscScalar);
9598965ea79SLois Curfman McInnes 
9604994cf47SJed Brown PetscErrorCode MatSetUp_MPIDense(Mat A)
961273d9f13SBarry Smith {
962dfbe8321SBarry Smith   PetscErrorCode ierr;
963273d9f13SBarry Smith 
964273d9f13SBarry Smith   PetscFunctionBegin;
96518992e5dSStefano Zampini   ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr);
96618992e5dSStefano Zampini   ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr);
96718992e5dSStefano Zampini   if (!A->preallocated) {
968f4259b30SLisandro Dalcin     ierr = MatMPIDenseSetPreallocation(A,NULL);CHKERRQ(ierr);
96918992e5dSStefano Zampini   }
970273d9f13SBarry Smith   PetscFunctionReturn(0);
971273d9f13SBarry Smith }
972273d9f13SBarry Smith 
973488007eeSBarry Smith PetscErrorCode MatAXPY_MPIDense(Mat Y,PetscScalar alpha,Mat X,MatStructure str)
974488007eeSBarry Smith {
975488007eeSBarry Smith   PetscErrorCode ierr;
976488007eeSBarry Smith   Mat_MPIDense   *A = (Mat_MPIDense*)Y->data, *B = (Mat_MPIDense*)X->data;
977488007eeSBarry Smith 
978488007eeSBarry Smith   PetscFunctionBegin;
979488007eeSBarry Smith   ierr = MatAXPY(A->A,alpha,B->A,str);CHKERRQ(ierr);
980488007eeSBarry Smith   PetscFunctionReturn(0);
981488007eeSBarry Smith }
982488007eeSBarry Smith 
9837087cfbeSBarry Smith PetscErrorCode MatConjugate_MPIDense(Mat mat)
984ba337c44SJed Brown {
985ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
986ba337c44SJed Brown   PetscErrorCode ierr;
987ba337c44SJed Brown 
988ba337c44SJed Brown   PetscFunctionBegin;
989ba337c44SJed Brown   ierr = MatConjugate(a->A);CHKERRQ(ierr);
990ba337c44SJed Brown   PetscFunctionReturn(0);
991ba337c44SJed Brown }
992ba337c44SJed Brown 
993ba337c44SJed Brown PetscErrorCode MatRealPart_MPIDense(Mat A)
994ba337c44SJed Brown {
995ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
996ba337c44SJed Brown   PetscErrorCode ierr;
997ba337c44SJed Brown 
998ba337c44SJed Brown   PetscFunctionBegin;
999ba337c44SJed Brown   ierr = MatRealPart(a->A);CHKERRQ(ierr);
1000ba337c44SJed Brown   PetscFunctionReturn(0);
1001ba337c44SJed Brown }
1002ba337c44SJed Brown 
1003ba337c44SJed Brown PetscErrorCode MatImaginaryPart_MPIDense(Mat A)
1004ba337c44SJed Brown {
1005ba337c44SJed Brown   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
1006ba337c44SJed Brown   PetscErrorCode ierr;
1007ba337c44SJed Brown 
1008ba337c44SJed Brown   PetscFunctionBegin;
1009ba337c44SJed Brown   ierr = MatImaginaryPart(a->A);CHKERRQ(ierr);
1010ba337c44SJed Brown   PetscFunctionReturn(0);
1011ba337c44SJed Brown }
1012ba337c44SJed Brown 
101349a6ff4bSBarry Smith static PetscErrorCode MatGetColumnVector_MPIDense(Mat A,Vec v,PetscInt col)
101449a6ff4bSBarry Smith {
101549a6ff4bSBarry Smith   PetscErrorCode ierr;
1016637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
101749a6ff4bSBarry Smith 
101849a6ff4bSBarry Smith   PetscFunctionBegin;
1019637a0070SStefano Zampini   if (!a->A) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing local matrix");
1020637a0070SStefano Zampini   if (!a->A->ops->getcolumnvector) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONGSTATE,"Missing get column operation");
1021637a0070SStefano Zampini   ierr = (*a->A->ops->getcolumnvector)(a->A,v,col);CHKERRQ(ierr);
102249a6ff4bSBarry Smith   PetscFunctionReturn(0);
102349a6ff4bSBarry Smith }
102449a6ff4bSBarry Smith 
102552c5f739Sprj- PETSC_INTERN PetscErrorCode MatGetColumnNorms_SeqDense(Mat,NormType,PetscReal*);
102652c5f739Sprj- 
10270716a85fSBarry Smith PetscErrorCode MatGetColumnNorms_MPIDense(Mat A,NormType type,PetscReal *norms)
10280716a85fSBarry Smith {
10290716a85fSBarry Smith   PetscErrorCode ierr;
10300716a85fSBarry Smith   PetscInt       i,n;
10310716a85fSBarry Smith   Mat_MPIDense   *a = (Mat_MPIDense*) A->data;
10320716a85fSBarry Smith   PetscReal      *work;
10330716a85fSBarry Smith 
10340716a85fSBarry Smith   PetscFunctionBegin;
10350298fd71SBarry Smith   ierr = MatGetSize(A,NULL,&n);CHKERRQ(ierr);
1036785e854fSJed Brown   ierr = PetscMalloc1(n,&work);CHKERRQ(ierr);
10370716a85fSBarry Smith   ierr = MatGetColumnNorms_SeqDense(a->A,type,work);CHKERRQ(ierr);
10380716a85fSBarry Smith   if (type == NORM_2) {
10390716a85fSBarry Smith     for (i=0; i<n; i++) work[i] *= work[i];
10400716a85fSBarry Smith   }
10410716a85fSBarry Smith   if (type == NORM_INFINITY) {
1042b2566f29SBarry Smith     ierr = MPIU_Allreduce(work,norms,n,MPIU_REAL,MPIU_MAX,A->hdr.comm);CHKERRQ(ierr);
10430716a85fSBarry Smith   } else {
1044b2566f29SBarry Smith     ierr = MPIU_Allreduce(work,norms,n,MPIU_REAL,MPIU_SUM,A->hdr.comm);CHKERRQ(ierr);
10450716a85fSBarry Smith   }
10460716a85fSBarry Smith   ierr = PetscFree(work);CHKERRQ(ierr);
10470716a85fSBarry Smith   if (type == NORM_2) {
10488f1a2a5eSBarry Smith     for (i=0; i<n; i++) norms[i] = PetscSqrtReal(norms[i]);
10490716a85fSBarry Smith   }
10500716a85fSBarry Smith   PetscFunctionReturn(0);
10510716a85fSBarry Smith }
10520716a85fSBarry Smith 
1053637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
10546947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10556947451fSStefano Zampini {
10566947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10576947451fSStefano Zampini   PetscErrorCode ierr;
10586947451fSStefano Zampini   PetscInt       lda;
10596947451fSStefano Zampini 
10606947451fSStefano Zampini   PetscFunctionBegin;
1061616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1062616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10636947451fSStefano Zampini   if (!a->cvec) {
10646947451fSStefano Zampini     ierr = VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
1065616b8fbbSStefano Zampini     ierr = PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec);CHKERRQ(ierr);
10666947451fSStefano Zampini   }
10676947451fSStefano Zampini   a->vecinuse = col + 1;
10686947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
10696947451fSStefano Zampini   ierr = MatDenseCUDAGetArray(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
10706947451fSStefano Zampini   ierr = VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
10716947451fSStefano Zampini   *v   = a->cvec;
10726947451fSStefano Zampini   PetscFunctionReturn(0);
10736947451fSStefano Zampini }
10746947451fSStefano Zampini 
10756947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10766947451fSStefano Zampini {
10776947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10786947451fSStefano Zampini   PetscErrorCode ierr;
10796947451fSStefano Zampini 
10806947451fSStefano Zampini   PetscFunctionBegin;
10815ea7661aSPierre Jolivet   if (!a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
10826947451fSStefano Zampini   if (!a->cvec) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
10836947451fSStefano Zampini   a->vecinuse = 0;
10846947451fSStefano Zampini   ierr = MatDenseCUDARestoreArray(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
10856947451fSStefano Zampini   ierr = VecCUDAResetArray(a->cvec);CHKERRQ(ierr);
10866947451fSStefano Zampini   *v   = NULL;
10876947451fSStefano Zampini   PetscFunctionReturn(0);
10886947451fSStefano Zampini }
10896947451fSStefano Zampini 
10906947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
10916947451fSStefano Zampini {
10926947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
10936947451fSStefano Zampini   PetscInt       lda;
10946947451fSStefano Zampini   PetscErrorCode ierr;
10956947451fSStefano Zampini 
10966947451fSStefano Zampini   PetscFunctionBegin;
1097616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1098616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
10996947451fSStefano Zampini   if (!a->cvec) {
11006947451fSStefano Zampini     ierr = VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
1101616b8fbbSStefano Zampini     ierr = PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec);CHKERRQ(ierr);
11026947451fSStefano Zampini   }
11036947451fSStefano Zampini   a->vecinuse = col + 1;
11046947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
11056947451fSStefano Zampini   ierr = MatDenseCUDAGetArrayRead(a->A,&a->ptrinuse);CHKERRQ(ierr);
11066947451fSStefano Zampini   ierr = VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
11076947451fSStefano Zampini   ierr = VecLockReadPush(a->cvec);CHKERRQ(ierr);
11086947451fSStefano Zampini   *v   = a->cvec;
11096947451fSStefano Zampini   PetscFunctionReturn(0);
11106947451fSStefano Zampini }
11116947451fSStefano Zampini 
11126947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11136947451fSStefano Zampini {
11146947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11156947451fSStefano Zampini   PetscErrorCode ierr;
11166947451fSStefano Zampini 
11176947451fSStefano Zampini   PetscFunctionBegin;
1118616b8fbbSStefano Zampini   if (!a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
1119616b8fbbSStefano Zampini   if (!a->cvec) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
11206947451fSStefano Zampini   a->vecinuse = 0;
11216947451fSStefano Zampini   ierr = MatDenseCUDARestoreArrayRead(a->A,&a->ptrinuse);CHKERRQ(ierr);
11226947451fSStefano Zampini   ierr = VecLockReadPop(a->cvec);CHKERRQ(ierr);
11236947451fSStefano Zampini   ierr = VecCUDAResetArray(a->cvec);CHKERRQ(ierr);
11246947451fSStefano Zampini   *v   = NULL;
11256947451fSStefano Zampini   PetscFunctionReturn(0);
11266947451fSStefano Zampini }
11276947451fSStefano Zampini 
11286947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11296947451fSStefano Zampini {
11306947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11316947451fSStefano Zampini   PetscErrorCode ierr;
11326947451fSStefano Zampini   PetscInt       lda;
11336947451fSStefano Zampini 
11346947451fSStefano Zampini   PetscFunctionBegin;
1135616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1136616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
11376947451fSStefano Zampini   if (!a->cvec) {
11386947451fSStefano Zampini     ierr = VecCreateMPICUDAWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
1139616b8fbbSStefano Zampini     ierr = PetscLogObjectParent((PetscObject)A,(PetscObject)a->cvec);CHKERRQ(ierr);
11406947451fSStefano Zampini   }
11416947451fSStefano Zampini   a->vecinuse = col + 1;
11426947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
11436947451fSStefano Zampini   ierr = MatDenseCUDAGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
11446947451fSStefano Zampini   ierr = VecCUDAPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
11456947451fSStefano Zampini   *v   = a->cvec;
11466947451fSStefano Zampini   PetscFunctionReturn(0);
11476947451fSStefano Zampini }
11486947451fSStefano Zampini 
11496947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDenseCUDA(Mat A,PetscInt col,Vec *v)
11506947451fSStefano Zampini {
11516947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
11526947451fSStefano Zampini   PetscErrorCode ierr;
11536947451fSStefano Zampini 
11546947451fSStefano Zampini   PetscFunctionBegin;
1155616b8fbbSStefano Zampini   if (!a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
1156616b8fbbSStefano Zampini   if (!a->cvec) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
11576947451fSStefano Zampini   a->vecinuse = 0;
11586947451fSStefano Zampini   ierr = MatDenseCUDARestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
11596947451fSStefano Zampini   ierr = VecCUDAResetArray(a->cvec);CHKERRQ(ierr);
11606947451fSStefano Zampini   *v   = NULL;
11616947451fSStefano Zampini   PetscFunctionReturn(0);
11626947451fSStefano Zampini }
11636947451fSStefano Zampini 
1164637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAPlaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1165637a0070SStefano Zampini {
1166637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1167637a0070SStefano Zampini   PetscErrorCode ierr;
1168637a0070SStefano Zampini 
1169637a0070SStefano Zampini   PetscFunctionBegin;
1170616b8fbbSStefano Zampini   if (l->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1171616b8fbbSStefano Zampini   if (l->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1172637a0070SStefano Zampini   ierr = MatDenseCUDAPlaceArray(l->A,a);CHKERRQ(ierr);
1173637a0070SStefano Zampini   PetscFunctionReturn(0);
1174637a0070SStefano Zampini }
1175637a0070SStefano Zampini 
1176637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAResetArray_MPIDenseCUDA(Mat A)
1177637a0070SStefano Zampini {
1178637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1179637a0070SStefano Zampini   PetscErrorCode ierr;
1180637a0070SStefano Zampini 
1181637a0070SStefano Zampini   PetscFunctionBegin;
1182616b8fbbSStefano Zampini   if (l->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1183616b8fbbSStefano Zampini   if (l->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1184637a0070SStefano Zampini   ierr = MatDenseCUDAResetArray(l->A);CHKERRQ(ierr);
1185637a0070SStefano Zampini   PetscFunctionReturn(0);
1186637a0070SStefano Zampini }
1187637a0070SStefano Zampini 
1188d5ea218eSStefano Zampini static PetscErrorCode MatDenseCUDAReplaceArray_MPIDenseCUDA(Mat A, const PetscScalar *a)
1189d5ea218eSStefano Zampini {
1190d5ea218eSStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1191d5ea218eSStefano Zampini   PetscErrorCode ierr;
1192d5ea218eSStefano Zampini 
1193d5ea218eSStefano Zampini   PetscFunctionBegin;
1194616b8fbbSStefano Zampini   if (l->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1195616b8fbbSStefano Zampini   if (l->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1196d5ea218eSStefano Zampini   ierr = MatDenseCUDAReplaceArray(l->A,a);CHKERRQ(ierr);
1197d5ea218eSStefano Zampini   PetscFunctionReturn(0);
1198d5ea218eSStefano Zampini }
1199d5ea218eSStefano Zampini 
1200637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1201637a0070SStefano Zampini {
1202637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1203637a0070SStefano Zampini   PetscErrorCode ierr;
1204637a0070SStefano Zampini 
1205637a0070SStefano Zampini   PetscFunctionBegin;
1206637a0070SStefano Zampini   ierr = MatDenseCUDAGetArrayWrite(l->A,a);CHKERRQ(ierr);
1207637a0070SStefano Zampini   PetscFunctionReturn(0);
1208637a0070SStefano Zampini }
1209637a0070SStefano Zampini 
1210637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayWrite_MPIDenseCUDA(Mat A, PetscScalar **a)
1211637a0070SStefano Zampini {
1212637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1213637a0070SStefano Zampini   PetscErrorCode ierr;
1214637a0070SStefano Zampini 
1215637a0070SStefano Zampini   PetscFunctionBegin;
1216637a0070SStefano Zampini   ierr = MatDenseCUDARestoreArrayWrite(l->A,a);CHKERRQ(ierr);
1217637a0070SStefano Zampini   PetscFunctionReturn(0);
1218637a0070SStefano Zampini }
1219637a0070SStefano Zampini 
1220637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1221637a0070SStefano Zampini {
1222637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1223637a0070SStefano Zampini   PetscErrorCode ierr;
1224637a0070SStefano Zampini 
1225637a0070SStefano Zampini   PetscFunctionBegin;
1226637a0070SStefano Zampini   ierr = MatDenseCUDAGetArrayRead(l->A,a);CHKERRQ(ierr);
1227637a0070SStefano Zampini   PetscFunctionReturn(0);
1228637a0070SStefano Zampini }
1229637a0070SStefano Zampini 
1230637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArrayRead_MPIDenseCUDA(Mat A, const PetscScalar **a)
1231637a0070SStefano Zampini {
1232637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1233637a0070SStefano Zampini   PetscErrorCode ierr;
1234637a0070SStefano Zampini 
1235637a0070SStefano Zampini   PetscFunctionBegin;
1236637a0070SStefano Zampini   ierr = MatDenseCUDARestoreArrayRead(l->A,a);CHKERRQ(ierr);
1237637a0070SStefano Zampini   PetscFunctionReturn(0);
1238637a0070SStefano Zampini }
1239637a0070SStefano Zampini 
1240637a0070SStefano Zampini static PetscErrorCode MatDenseCUDAGetArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1241637a0070SStefano Zampini {
1242637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1243637a0070SStefano Zampini   PetscErrorCode ierr;
1244637a0070SStefano Zampini 
1245637a0070SStefano Zampini   PetscFunctionBegin;
1246637a0070SStefano Zampini   ierr = MatDenseCUDAGetArray(l->A,a);CHKERRQ(ierr);
1247637a0070SStefano Zampini   PetscFunctionReturn(0);
1248637a0070SStefano Zampini }
1249637a0070SStefano Zampini 
1250637a0070SStefano Zampini static PetscErrorCode MatDenseCUDARestoreArray_MPIDenseCUDA(Mat A, PetscScalar **a)
1251637a0070SStefano Zampini {
1252637a0070SStefano Zampini   Mat_MPIDense   *l = (Mat_MPIDense*) A->data;
1253637a0070SStefano Zampini   PetscErrorCode ierr;
1254637a0070SStefano Zampini 
1255637a0070SStefano Zampini   PetscFunctionBegin;
1256637a0070SStefano Zampini   ierr = MatDenseCUDARestoreArray(l->A,a);CHKERRQ(ierr);
1257637a0070SStefano Zampini   PetscFunctionReturn(0);
1258637a0070SStefano Zampini }
1259637a0070SStefano Zampini 
12606947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12616947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12626947451fSStefano Zampini static PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat,PetscInt,Vec*);
12636947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat,PetscInt,Vec*);
12646947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat,PetscInt,Vec*);
12656947451fSStefano Zampini static PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat,PetscInt,Vec*);
12665ea7661aSPierre Jolivet static PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat,Mat*);
12676947451fSStefano Zampini 
1268637a0070SStefano Zampini static PetscErrorCode MatBindToCPU_MPIDenseCUDA(Mat mat,PetscBool bind)
1269637a0070SStefano Zampini {
1270637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)mat->data;
1271637a0070SStefano Zampini   PetscErrorCode ierr;
1272637a0070SStefano Zampini 
1273637a0070SStefano Zampini   PetscFunctionBegin;
1274616b8fbbSStefano Zampini   if (d->vecinuse) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1275616b8fbbSStefano Zampini   if (d->matinuse) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1276637a0070SStefano Zampini   if (d->A) {
1277637a0070SStefano Zampini     ierr = MatBindToCPU(d->A,bind);CHKERRQ(ierr);
1278637a0070SStefano Zampini   }
1279637a0070SStefano Zampini   mat->boundtocpu = bind;
12806947451fSStefano Zampini   if (!bind) {
12816947451fSStefano Zampini     PetscBool iscuda;
12826947451fSStefano Zampini 
12836947451fSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)d->cvec,VECMPICUDA,&iscuda);CHKERRQ(ierr);
12846947451fSStefano Zampini     if (!iscuda) {
12856947451fSStefano Zampini       ierr = VecDestroy(&d->cvec);CHKERRQ(ierr);
1286616b8fbbSStefano Zampini     }
1287616b8fbbSStefano Zampini     ierr = PetscObjectTypeCompare((PetscObject)d->cmat,MATMPIDENSECUDA,&iscuda);CHKERRQ(ierr);
1288616b8fbbSStefano Zampini     if (!iscuda) {
12895ea7661aSPierre Jolivet       ierr = MatDestroy(&d->cmat);CHKERRQ(ierr);
12906947451fSStefano Zampini     }
12916947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDenseCUDA);CHKERRQ(ierr);
12926947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDenseCUDA);CHKERRQ(ierr);
12936947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDenseCUDA);CHKERRQ(ierr);
12946947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDenseCUDA);CHKERRQ(ierr);
12956947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDenseCUDA);CHKERRQ(ierr);
12966947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDenseCUDA);CHKERRQ(ierr);
12976947451fSStefano Zampini   } else {
12986947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense);CHKERRQ(ierr);
12996947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense);CHKERRQ(ierr);
13006947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense);CHKERRQ(ierr);
13016947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense);CHKERRQ(ierr);
13026947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense);CHKERRQ(ierr);
13036947451fSStefano Zampini     ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense);CHKERRQ(ierr);
1304616b8fbbSStefano Zampini   }
1305616b8fbbSStefano Zampini   if (d->cmat) {
1306616b8fbbSStefano Zampini     ierr = MatBindToCPU(d->cmat,bind);CHKERRQ(ierr);
13076947451fSStefano Zampini   }
1308637a0070SStefano Zampini   PetscFunctionReturn(0);
1309637a0070SStefano Zampini }
1310637a0070SStefano Zampini 
1311637a0070SStefano Zampini PetscErrorCode MatMPIDenseCUDASetPreallocation(Mat A, PetscScalar *d_data)
1312637a0070SStefano Zampini {
1313637a0070SStefano Zampini   Mat_MPIDense   *d = (Mat_MPIDense*)A->data;
1314637a0070SStefano Zampini   PetscErrorCode ierr;
1315637a0070SStefano Zampini   PetscBool      iscuda;
1316637a0070SStefano Zampini 
1317637a0070SStefano Zampini   PetscFunctionBegin;
1318d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
1319637a0070SStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIDENSECUDA,&iscuda);CHKERRQ(ierr);
1320637a0070SStefano Zampini   if (!iscuda) PetscFunctionReturn(0);
1321637a0070SStefano Zampini   ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr);
1322637a0070SStefano Zampini   ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr);
1323637a0070SStefano Zampini   if (!d->A) {
1324637a0070SStefano Zampini     ierr = MatCreate(PETSC_COMM_SELF,&d->A);CHKERRQ(ierr);
1325637a0070SStefano Zampini     ierr = PetscLogObjectParent((PetscObject)A,(PetscObject)d->A);CHKERRQ(ierr);
1326637a0070SStefano Zampini     ierr = MatSetSizes(d->A,A->rmap->n,A->cmap->N,A->rmap->n,A->cmap->N);CHKERRQ(ierr);
1327637a0070SStefano Zampini   }
1328637a0070SStefano Zampini   ierr = MatSetType(d->A,MATSEQDENSECUDA);CHKERRQ(ierr);
1329637a0070SStefano Zampini   ierr = MatSeqDenseCUDASetPreallocation(d->A,d_data);CHKERRQ(ierr);
1330637a0070SStefano Zampini   A->preallocated = PETSC_TRUE;
1331637a0070SStefano Zampini   PetscFunctionReturn(0);
1332637a0070SStefano Zampini }
1333637a0070SStefano Zampini #endif
1334637a0070SStefano Zampini 
133573a71a0fSBarry Smith static PetscErrorCode MatSetRandom_MPIDense(Mat x,PetscRandom rctx)
133673a71a0fSBarry Smith {
133773a71a0fSBarry Smith   Mat_MPIDense   *d = (Mat_MPIDense*)x->data;
133873a71a0fSBarry Smith   PetscErrorCode ierr;
133973a71a0fSBarry Smith 
134073a71a0fSBarry Smith   PetscFunctionBegin;
1341637a0070SStefano Zampini   ierr = MatSetRandom(d->A,rctx);CHKERRQ(ierr);
134273a71a0fSBarry Smith   PetscFunctionReturn(0);
134373a71a0fSBarry Smith }
134473a71a0fSBarry Smith 
13453b49f96aSBarry Smith static PetscErrorCode MatMissingDiagonal_MPIDense(Mat A,PetscBool  *missing,PetscInt *d)
13463b49f96aSBarry Smith {
13473b49f96aSBarry Smith   PetscFunctionBegin;
13483b49f96aSBarry Smith   *missing = PETSC_FALSE;
13493b49f96aSBarry Smith   PetscFunctionReturn(0);
13503b49f96aSBarry Smith }
13513b49f96aSBarry Smith 
13524222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
1353cc48ffa7SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13546718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat,Mat,Mat);
13556718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat,Mat,PetscReal,Mat);
13566718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat,Mat,PetscBool*);
13576718818eSStefano Zampini static PetscErrorCode MatLoad_MPIDense(Mat,PetscViewer);
1358cc48ffa7SToby Isaac 
13598965ea79SLois Curfman McInnes /* -------------------------------------------------------------------*/
136009dc0095SBarry Smith static struct _MatOps MatOps_Values = { MatSetValues_MPIDense,
136109dc0095SBarry Smith                                         MatGetRow_MPIDense,
136209dc0095SBarry Smith                                         MatRestoreRow_MPIDense,
136309dc0095SBarry Smith                                         MatMult_MPIDense,
136497304618SKris Buschelman                                 /*  4*/ MatMultAdd_MPIDense,
13657c922b88SBarry Smith                                         MatMultTranspose_MPIDense,
13667c922b88SBarry Smith                                         MatMultTransposeAdd_MPIDense,
1367f4259b30SLisandro Dalcin                                         NULL,
1368f4259b30SLisandro Dalcin                                         NULL,
1369f4259b30SLisandro Dalcin                                         NULL,
1370f4259b30SLisandro Dalcin                                 /* 10*/ NULL,
1371f4259b30SLisandro Dalcin                                         NULL,
1372f4259b30SLisandro Dalcin                                         NULL,
1373f4259b30SLisandro Dalcin                                         NULL,
137409dc0095SBarry Smith                                         MatTranspose_MPIDense,
137597304618SKris Buschelman                                 /* 15*/ MatGetInfo_MPIDense,
13766e4ee0c6SHong Zhang                                         MatEqual_MPIDense,
137709dc0095SBarry Smith                                         MatGetDiagonal_MPIDense,
13785b2fa520SLois Curfman McInnes                                         MatDiagonalScale_MPIDense,
137909dc0095SBarry Smith                                         MatNorm_MPIDense,
138097304618SKris Buschelman                                 /* 20*/ MatAssemblyBegin_MPIDense,
138109dc0095SBarry Smith                                         MatAssemblyEnd_MPIDense,
138209dc0095SBarry Smith                                         MatSetOption_MPIDense,
138309dc0095SBarry Smith                                         MatZeroEntries_MPIDense,
1384d519adbfSMatthew Knepley                                 /* 24*/ MatZeroRows_MPIDense,
1385f4259b30SLisandro Dalcin                                         NULL,
1386f4259b30SLisandro Dalcin                                         NULL,
1387f4259b30SLisandro Dalcin                                         NULL,
1388f4259b30SLisandro Dalcin                                         NULL,
13894994cf47SJed Brown                                 /* 29*/ MatSetUp_MPIDense,
1390f4259b30SLisandro Dalcin                                         NULL,
1391f4259b30SLisandro Dalcin                                         NULL,
1392c56a70eeSBarry Smith                                         MatGetDiagonalBlock_MPIDense,
1393f4259b30SLisandro Dalcin                                         NULL,
1394d519adbfSMatthew Knepley                                 /* 34*/ MatDuplicate_MPIDense,
1395f4259b30SLisandro Dalcin                                         NULL,
1396f4259b30SLisandro Dalcin                                         NULL,
1397f4259b30SLisandro Dalcin                                         NULL,
1398f4259b30SLisandro Dalcin                                         NULL,
1399d519adbfSMatthew Knepley                                 /* 39*/ MatAXPY_MPIDense,
14007dae84e0SHong Zhang                                         MatCreateSubMatrices_MPIDense,
1401f4259b30SLisandro Dalcin                                         NULL,
140209dc0095SBarry Smith                                         MatGetValues_MPIDense,
1403a76f77c3SStefano Zampini                                         MatCopy_MPIDense,
1404f4259b30SLisandro Dalcin                                 /* 44*/ NULL,
140509dc0095SBarry Smith                                         MatScale_MPIDense,
14067d68702bSBarry Smith                                         MatShift_Basic,
1407f4259b30SLisandro Dalcin                                         NULL,
1408f4259b30SLisandro Dalcin                                         NULL,
140973a71a0fSBarry Smith                                 /* 49*/ MatSetRandom_MPIDense,
1410f4259b30SLisandro Dalcin                                         NULL,
1411f4259b30SLisandro Dalcin                                         NULL,
1412f4259b30SLisandro Dalcin                                         NULL,
1413f4259b30SLisandro Dalcin                                         NULL,
1414f4259b30SLisandro Dalcin                                 /* 54*/ NULL,
1415f4259b30SLisandro Dalcin                                         NULL,
1416f4259b30SLisandro Dalcin                                         NULL,
1417f4259b30SLisandro Dalcin                                         NULL,
1418f4259b30SLisandro Dalcin                                         NULL,
14197dae84e0SHong Zhang                                 /* 59*/ MatCreateSubMatrix_MPIDense,
1420b9b97703SBarry Smith                                         MatDestroy_MPIDense,
1421b9b97703SBarry Smith                                         MatView_MPIDense,
1422f4259b30SLisandro Dalcin                                         NULL,
1423f4259b30SLisandro Dalcin                                         NULL,
1424f4259b30SLisandro Dalcin                                 /* 64*/ NULL,
1425f4259b30SLisandro Dalcin                                         NULL,
1426f4259b30SLisandro Dalcin                                         NULL,
1427f4259b30SLisandro Dalcin                                         NULL,
1428f4259b30SLisandro Dalcin                                         NULL,
1429f4259b30SLisandro Dalcin                                 /* 69*/ NULL,
1430f4259b30SLisandro Dalcin                                         NULL,
1431f4259b30SLisandro Dalcin                                         NULL,
1432f4259b30SLisandro Dalcin                                         NULL,
1433f4259b30SLisandro Dalcin                                         NULL,
1434f4259b30SLisandro Dalcin                                 /* 74*/ NULL,
1435f4259b30SLisandro Dalcin                                         NULL,
1436f4259b30SLisandro Dalcin                                         NULL,
1437f4259b30SLisandro Dalcin                                         NULL,
1438f4259b30SLisandro Dalcin                                         NULL,
1439f4259b30SLisandro Dalcin                                 /* 79*/ NULL,
1440f4259b30SLisandro Dalcin                                         NULL,
1441f4259b30SLisandro Dalcin                                         NULL,
1442f4259b30SLisandro Dalcin                                         NULL,
14435bba2384SShri Abhyankar                                 /* 83*/ MatLoad_MPIDense,
1444f4259b30SLisandro Dalcin                                         NULL,
1445f4259b30SLisandro Dalcin                                         NULL,
1446f4259b30SLisandro Dalcin                                         NULL,
1447f4259b30SLisandro Dalcin                                         NULL,
1448f4259b30SLisandro Dalcin                                         NULL,
1449f4259b30SLisandro Dalcin                                 /* 89*/ NULL,
1450f4259b30SLisandro Dalcin                                         NULL,
1451f4259b30SLisandro Dalcin                                         NULL,
1452f4259b30SLisandro Dalcin                                         NULL,
1453f4259b30SLisandro Dalcin                                         NULL,
1454f4259b30SLisandro Dalcin                                 /* 94*/ NULL,
1455f4259b30SLisandro Dalcin                                         NULL,
14566718818eSStefano Zampini                                         MatMatTransposeMultSymbolic_MPIDense_MPIDense,
1457cc48ffa7SToby Isaac                                         MatMatTransposeMultNumeric_MPIDense_MPIDense,
1458f4259b30SLisandro Dalcin                                         NULL,
14594222ddf1SHong Zhang                                 /* 99*/ MatProductSetFromOptions_MPIDense,
1460f4259b30SLisandro Dalcin                                         NULL,
1461f4259b30SLisandro Dalcin                                         NULL,
1462ba337c44SJed Brown                                         MatConjugate_MPIDense,
1463f4259b30SLisandro Dalcin                                         NULL,
1464f4259b30SLisandro Dalcin                                 /*104*/ NULL,
1465ba337c44SJed Brown                                         MatRealPart_MPIDense,
1466ba337c44SJed Brown                                         MatImaginaryPart_MPIDense,
1467f4259b30SLisandro Dalcin                                         NULL,
1468f4259b30SLisandro Dalcin                                         NULL,
1469f4259b30SLisandro Dalcin                                 /*109*/ NULL,
1470f4259b30SLisandro Dalcin                                         NULL,
1471f4259b30SLisandro Dalcin                                         NULL,
147249a6ff4bSBarry Smith                                         MatGetColumnVector_MPIDense,
14733b49f96aSBarry Smith                                         MatMissingDiagonal_MPIDense,
1474f4259b30SLisandro Dalcin                                 /*114*/ NULL,
1475f4259b30SLisandro Dalcin                                         NULL,
1476f4259b30SLisandro Dalcin                                         NULL,
1477f4259b30SLisandro Dalcin                                         NULL,
1478f4259b30SLisandro Dalcin                                         NULL,
1479f4259b30SLisandro Dalcin                                 /*119*/ NULL,
1480f4259b30SLisandro Dalcin                                         NULL,
1481f4259b30SLisandro Dalcin                                         NULL,
1482f4259b30SLisandro Dalcin                                         NULL,
1483f4259b30SLisandro Dalcin                                         NULL,
1484f4259b30SLisandro Dalcin                                 /*124*/ NULL,
14853964eb88SJed Brown                                         MatGetColumnNorms_MPIDense,
1486f4259b30SLisandro Dalcin                                         NULL,
1487f4259b30SLisandro Dalcin                                         NULL,
1488f4259b30SLisandro Dalcin                                         NULL,
1489f4259b30SLisandro Dalcin                                 /*129*/ NULL,
1490f4259b30SLisandro Dalcin                                         NULL,
14916718818eSStefano Zampini                                         MatTransposeMatMultSymbolic_MPIDense_MPIDense,
1492cb20be35SHong Zhang                                         MatTransposeMatMultNumeric_MPIDense_MPIDense,
1493f4259b30SLisandro Dalcin                                         NULL,
1494f4259b30SLisandro Dalcin                                 /*134*/ NULL,
1495f4259b30SLisandro Dalcin                                         NULL,
1496f4259b30SLisandro Dalcin                                         NULL,
1497f4259b30SLisandro Dalcin                                         NULL,
1498f4259b30SLisandro Dalcin                                         NULL,
1499f4259b30SLisandro Dalcin                                 /*139*/ NULL,
1500f4259b30SLisandro Dalcin                                         NULL,
1501f4259b30SLisandro Dalcin                                         NULL,
1502f4259b30SLisandro Dalcin                                         NULL,
1503f4259b30SLisandro Dalcin                                         NULL,
15044222ddf1SHong Zhang                                         MatCreateMPIMatConcatenateSeqMat_MPIDense,
1505f4259b30SLisandro Dalcin                                 /*145*/ NULL,
1506f4259b30SLisandro Dalcin                                         NULL,
1507f4259b30SLisandro Dalcin                                         NULL
1508ba337c44SJed Brown };
15098965ea79SLois Curfman McInnes 
15107087cfbeSBarry Smith PetscErrorCode  MatMPIDenseSetPreallocation_MPIDense(Mat mat,PetscScalar *data)
1511a23d5eceSKris Buschelman {
1512637a0070SStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)mat->data;
1513637a0070SStefano Zampini   PetscBool      iscuda;
1514dfbe8321SBarry Smith   PetscErrorCode ierr;
1515a23d5eceSKris Buschelman 
1516a23d5eceSKris Buschelman   PetscFunctionBegin;
1517616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)mat),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
151834ef9618SShri Abhyankar   ierr = PetscLayoutSetUp(mat->rmap);CHKERRQ(ierr);
151934ef9618SShri Abhyankar   ierr = PetscLayoutSetUp(mat->cmap);CHKERRQ(ierr);
1520637a0070SStefano Zampini   if (!a->A) {
1521f69a0ea3SMatthew Knepley     ierr = MatCreate(PETSC_COMM_SELF,&a->A);CHKERRQ(ierr);
15223bb1ff40SBarry Smith     ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A);CHKERRQ(ierr);
1523637a0070SStefano Zampini     ierr = MatSetSizes(a->A,mat->rmap->n,mat->cmap->N,mat->rmap->n,mat->cmap->N);CHKERRQ(ierr);
1524637a0070SStefano Zampini   }
1525637a0070SStefano Zampini   ierr = PetscObjectTypeCompare((PetscObject)mat,MATMPIDENSECUDA,&iscuda);CHKERRQ(ierr);
1526637a0070SStefano Zampini   ierr = MatSetType(a->A,iscuda ? MATSEQDENSECUDA : MATSEQDENSE);CHKERRQ(ierr);
1527637a0070SStefano Zampini   ierr = MatSeqDenseSetPreallocation(a->A,data);CHKERRQ(ierr);
1528637a0070SStefano Zampini   mat->preallocated = PETSC_TRUE;
1529a23d5eceSKris Buschelman   PetscFunctionReturn(0);
1530a23d5eceSKris Buschelman }
1531a23d5eceSKris Buschelman 
15324e29119aSPierre Jolivet PETSC_INTERN PetscErrorCode MatConvert_MPIAIJ_MPIDense(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15334e29119aSPierre Jolivet {
15344e29119aSPierre Jolivet   Mat            B,C;
15354e29119aSPierre Jolivet   PetscErrorCode ierr;
15364e29119aSPierre Jolivet 
15374e29119aSPierre Jolivet   PetscFunctionBegin;
15384e29119aSPierre Jolivet   ierr = MatMPIAIJGetLocalMat(A,MAT_INITIAL_MATRIX,&C);CHKERRQ(ierr);
15394e29119aSPierre Jolivet   ierr = MatConvert_SeqAIJ_SeqDense(C,MATSEQDENSE,MAT_INITIAL_MATRIX,&B);CHKERRQ(ierr);
15404e29119aSPierre Jolivet   ierr = MatDestroy(&C);CHKERRQ(ierr);
15414e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
15424e29119aSPierre Jolivet     C = *newmat;
15434e29119aSPierre Jolivet   } else C = NULL;
15444e29119aSPierre Jolivet   ierr = MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A),B,A->cmap->n,!C?MAT_INITIAL_MATRIX:MAT_REUSE_MATRIX,&C);CHKERRQ(ierr);
15454e29119aSPierre Jolivet   ierr = MatDestroy(&B);CHKERRQ(ierr);
15464e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
15474e29119aSPierre Jolivet     ierr = MatHeaderReplace(A,&C);CHKERRQ(ierr);
15484e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
15494e29119aSPierre Jolivet   PetscFunctionReturn(0);
15504e29119aSPierre Jolivet }
15514e29119aSPierre Jolivet 
15524e29119aSPierre Jolivet PetscErrorCode MatConvert_MPIDense_MPIAIJ(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15534e29119aSPierre Jolivet {
15544e29119aSPierre Jolivet   Mat            B,C;
15554e29119aSPierre Jolivet   PetscErrorCode ierr;
15564e29119aSPierre Jolivet 
15574e29119aSPierre Jolivet   PetscFunctionBegin;
15584e29119aSPierre Jolivet   ierr = MatDenseGetLocalMatrix(A,&C);CHKERRQ(ierr);
15594e29119aSPierre Jolivet   ierr = MatConvert_SeqDense_SeqAIJ(C,MATSEQAIJ,MAT_INITIAL_MATRIX,&B);CHKERRQ(ierr);
15604e29119aSPierre Jolivet   if (reuse == MAT_REUSE_MATRIX) {
15614e29119aSPierre Jolivet     C = *newmat;
15624e29119aSPierre Jolivet   } else C = NULL;
15634e29119aSPierre Jolivet   ierr = MatCreateMPIMatConcatenateSeqMat(PetscObjectComm((PetscObject)A),B,A->cmap->n,!C?MAT_INITIAL_MATRIX:MAT_REUSE_MATRIX,&C);CHKERRQ(ierr);
15644e29119aSPierre Jolivet   ierr = MatDestroy(&B);CHKERRQ(ierr);
15654e29119aSPierre Jolivet   if (reuse == MAT_INPLACE_MATRIX) {
15664e29119aSPierre Jolivet     ierr = MatHeaderReplace(A,&C);CHKERRQ(ierr);
15674e29119aSPierre Jolivet   } else if (reuse == MAT_INITIAL_MATRIX) *newmat = C;
15684e29119aSPierre Jolivet   PetscFunctionReturn(0);
15694e29119aSPierre Jolivet }
15704e29119aSPierre Jolivet 
157165b80a83SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
1572cc2e6a90SBarry Smith PETSC_INTERN PetscErrorCode MatConvert_MPIDense_Elemental(Mat A, MatType newtype,MatReuse reuse,Mat *newmat)
15738baccfbdSHong Zhang {
15748ea901baSHong Zhang   Mat            mat_elemental;
15758ea901baSHong Zhang   PetscErrorCode ierr;
157632d7a744SHong Zhang   PetscScalar    *v;
157732d7a744SHong Zhang   PetscInt       m=A->rmap->n,N=A->cmap->N,rstart=A->rmap->rstart,i,*rows,*cols;
15788ea901baSHong Zhang 
15798baccfbdSHong Zhang   PetscFunctionBegin;
1580378336b6SHong Zhang   if (reuse == MAT_REUSE_MATRIX) {
1581378336b6SHong Zhang     mat_elemental = *newmat;
1582378336b6SHong Zhang     ierr = MatZeroEntries(*newmat);CHKERRQ(ierr);
1583378336b6SHong Zhang   } else {
1584378336b6SHong Zhang     ierr = MatCreate(PetscObjectComm((PetscObject)A), &mat_elemental);CHKERRQ(ierr);
1585378336b6SHong Zhang     ierr = MatSetSizes(mat_elemental,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
1586378336b6SHong Zhang     ierr = MatSetType(mat_elemental,MATELEMENTAL);CHKERRQ(ierr);
1587378336b6SHong Zhang     ierr = MatSetUp(mat_elemental);CHKERRQ(ierr);
158832d7a744SHong Zhang     ierr = MatSetOption(mat_elemental,MAT_ROW_ORIENTED,PETSC_FALSE);CHKERRQ(ierr);
1589378336b6SHong Zhang   }
1590378336b6SHong Zhang 
159132d7a744SHong Zhang   ierr = PetscMalloc2(m,&rows,N,&cols);CHKERRQ(ierr);
159232d7a744SHong Zhang   for (i=0; i<N; i++) cols[i] = i;
159332d7a744SHong Zhang   for (i=0; i<m; i++) rows[i] = rstart + i;
15948ea901baSHong Zhang 
1595637a0070SStefano Zampini   /* PETSc-Elemental interface uses axpy for setting off-processor entries, only ADD_VALUES is allowed */
159632d7a744SHong Zhang   ierr = MatDenseGetArray(A,&v);CHKERRQ(ierr);
159732d7a744SHong Zhang   ierr = MatSetValues(mat_elemental,m,rows,N,cols,v,ADD_VALUES);CHKERRQ(ierr);
15988ea901baSHong Zhang   ierr = MatAssemblyBegin(mat_elemental, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
15998ea901baSHong Zhang   ierr = MatAssemblyEnd(mat_elemental, MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
160032d7a744SHong Zhang   ierr = MatDenseRestoreArray(A,&v);CHKERRQ(ierr);
160132d7a744SHong Zhang   ierr = PetscFree2(rows,cols);CHKERRQ(ierr);
16028ea901baSHong Zhang 
1603511c6705SHong Zhang   if (reuse == MAT_INPLACE_MATRIX) {
160428be2f97SBarry Smith     ierr = MatHeaderReplace(A,&mat_elemental);CHKERRQ(ierr);
16058ea901baSHong Zhang   } else {
16068ea901baSHong Zhang     *newmat = mat_elemental;
16078ea901baSHong Zhang   }
16088baccfbdSHong Zhang   PetscFunctionReturn(0);
16098baccfbdSHong Zhang }
161065b80a83SHong Zhang #endif
16118baccfbdSHong Zhang 
1612af53bab2SHong Zhang static PetscErrorCode MatDenseGetColumn_MPIDense(Mat A,PetscInt col,PetscScalar **vals)
161386aefd0dSHong Zhang {
161486aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
161586aefd0dSHong Zhang   PetscErrorCode ierr;
161686aefd0dSHong Zhang 
161786aefd0dSHong Zhang   PetscFunctionBegin;
161886aefd0dSHong Zhang   ierr = MatDenseGetColumn(mat->A,col,vals);CHKERRQ(ierr);
161986aefd0dSHong Zhang   PetscFunctionReturn(0);
162086aefd0dSHong Zhang }
162186aefd0dSHong Zhang 
1622af53bab2SHong Zhang static PetscErrorCode MatDenseRestoreColumn_MPIDense(Mat A,PetscScalar **vals)
162386aefd0dSHong Zhang {
162486aefd0dSHong Zhang   Mat_MPIDense   *mat = (Mat_MPIDense*)A->data;
162586aefd0dSHong Zhang   PetscErrorCode ierr;
162686aefd0dSHong Zhang 
162786aefd0dSHong Zhang   PetscFunctionBegin;
162886aefd0dSHong Zhang   ierr = MatDenseRestoreColumn(mat->A,vals);CHKERRQ(ierr);
162986aefd0dSHong Zhang   PetscFunctionReturn(0);
163086aefd0dSHong Zhang }
163186aefd0dSHong Zhang 
163294e2cb23SJakub Kruzik PetscErrorCode MatCreateMPIMatConcatenateSeqMat_MPIDense(MPI_Comm comm,Mat inmat,PetscInt n,MatReuse scall,Mat *outmat)
163394e2cb23SJakub Kruzik {
163494e2cb23SJakub Kruzik   PetscErrorCode ierr;
163594e2cb23SJakub Kruzik   Mat_MPIDense   *mat;
163694e2cb23SJakub Kruzik   PetscInt       m,nloc,N;
163794e2cb23SJakub Kruzik 
163894e2cb23SJakub Kruzik   PetscFunctionBegin;
163994e2cb23SJakub Kruzik   ierr = MatGetSize(inmat,&m,&N);CHKERRQ(ierr);
164094e2cb23SJakub Kruzik   ierr = MatGetLocalSize(inmat,NULL,&nloc);CHKERRQ(ierr);
164194e2cb23SJakub Kruzik   if (scall == MAT_INITIAL_MATRIX) { /* symbolic phase */
164294e2cb23SJakub Kruzik     PetscInt sum;
164394e2cb23SJakub Kruzik 
164494e2cb23SJakub Kruzik     if (n == PETSC_DECIDE) {
164594e2cb23SJakub Kruzik       ierr = PetscSplitOwnership(comm,&n,&N);CHKERRQ(ierr);
164694e2cb23SJakub Kruzik     }
164794e2cb23SJakub Kruzik     /* Check sum(n) = N */
164894e2cb23SJakub Kruzik     ierr = MPIU_Allreduce(&n,&sum,1,MPIU_INT,MPI_SUM,comm);CHKERRQ(ierr);
164994e2cb23SJakub Kruzik     if (sum != N) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_INCOMP,"Sum of local columns %D != global columns %D",sum,N);
165094e2cb23SJakub Kruzik 
165194e2cb23SJakub Kruzik     ierr = MatCreateDense(comm,m,n,PETSC_DETERMINE,N,NULL,outmat);CHKERRQ(ierr);
1652f2e2784eSPierre Jolivet     ierr = MatSetOption(*outmat,MAT_NO_OFF_PROC_ENTRIES,PETSC_TRUE);CHKERRQ(ierr);
165394e2cb23SJakub Kruzik   }
165494e2cb23SJakub Kruzik 
165594e2cb23SJakub Kruzik   /* numeric phase */
165694e2cb23SJakub Kruzik   mat = (Mat_MPIDense*)(*outmat)->data;
165794e2cb23SJakub Kruzik   ierr = MatCopy(inmat,mat->A,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
165894e2cb23SJakub Kruzik   ierr = MatAssemblyBegin(*outmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
165994e2cb23SJakub Kruzik   ierr = MatAssemblyEnd(*outmat,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
166094e2cb23SJakub Kruzik   PetscFunctionReturn(0);
166194e2cb23SJakub Kruzik }
166294e2cb23SJakub Kruzik 
1663637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1664637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDenseCUDA_MPIDense(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1665637a0070SStefano Zampini {
1666637a0070SStefano Zampini   Mat            B;
1667637a0070SStefano Zampini   Mat_MPIDense   *m;
1668637a0070SStefano Zampini   PetscErrorCode ierr;
1669637a0070SStefano Zampini 
1670637a0070SStefano Zampini   PetscFunctionBegin;
1671637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
1672637a0070SStefano Zampini     ierr = MatDuplicate(M,MAT_COPY_VALUES,newmat);CHKERRQ(ierr);
1673637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
1674637a0070SStefano Zampini     ierr = MatCopy(M,*newmat,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
1675637a0070SStefano Zampini   }
1676637a0070SStefano Zampini 
1677637a0070SStefano Zampini   B    = *newmat;
1678637a0070SStefano Zampini   ierr = MatBindToCPU_MPIDenseCUDA(B,PETSC_TRUE);CHKERRQ(ierr);
1679637a0070SStefano Zampini   ierr = PetscFree(B->defaultvectype);CHKERRQ(ierr);
1680637a0070SStefano Zampini   ierr = PetscStrallocpy(VECSTANDARD,&B->defaultvectype);CHKERRQ(ierr);
1681637a0070SStefano Zampini   ierr = PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSE);CHKERRQ(ierr);
1682637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",NULL);CHKERRQ(ierr);
1683637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",NULL);CHKERRQ(ierr);
16846718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",NULL);CHKERRQ(ierr);
1685637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",NULL);CHKERRQ(ierr);
16866718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",NULL);CHKERRQ(ierr);
1687637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",NULL);CHKERRQ(ierr);
1688637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",NULL);CHKERRQ(ierr);
1689637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",NULL);CHKERRQ(ierr);
1690637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",NULL);CHKERRQ(ierr);
1691637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",NULL);CHKERRQ(ierr);
1692637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",NULL);CHKERRQ(ierr);
1693637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",NULL);CHKERRQ(ierr);
1694637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",NULL);CHKERRQ(ierr);
1695d5ea218eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",NULL);CHKERRQ(ierr);
1696637a0070SStefano Zampini   m    = (Mat_MPIDense*)(B)->data;
1697637a0070SStefano Zampini   if (m->A) {
1698637a0070SStefano Zampini     ierr = MatConvert(m->A,MATSEQDENSE,MAT_INPLACE_MATRIX,&m->A);CHKERRQ(ierr);
1699637a0070SStefano Zampini     ierr = MatSetUpMultiply_MPIDense(B);CHKERRQ(ierr);
1700637a0070SStefano Zampini   }
1701637a0070SStefano Zampini   B->ops->bindtocpu = NULL;
1702637a0070SStefano Zampini   B->offloadmask    = PETSC_OFFLOAD_CPU;
1703637a0070SStefano Zampini   PetscFunctionReturn(0);
1704637a0070SStefano Zampini }
1705637a0070SStefano Zampini 
1706637a0070SStefano Zampini PetscErrorCode MatConvert_MPIDense_MPIDenseCUDA(Mat M,MatType type,MatReuse reuse,Mat *newmat)
1707637a0070SStefano Zampini {
1708637a0070SStefano Zampini   Mat            B;
1709637a0070SStefano Zampini   Mat_MPIDense   *m;
1710637a0070SStefano Zampini   PetscErrorCode ierr;
1711637a0070SStefano Zampini 
1712637a0070SStefano Zampini   PetscFunctionBegin;
1713637a0070SStefano Zampini   if (reuse == MAT_INITIAL_MATRIX) {
1714637a0070SStefano Zampini     ierr = MatDuplicate(M,MAT_COPY_VALUES,newmat);CHKERRQ(ierr);
1715637a0070SStefano Zampini   } else if (reuse == MAT_REUSE_MATRIX) {
1716637a0070SStefano Zampini     ierr = MatCopy(M,*newmat,SAME_NONZERO_PATTERN);CHKERRQ(ierr);
1717637a0070SStefano Zampini   }
1718637a0070SStefano Zampini 
1719637a0070SStefano Zampini   B    = *newmat;
1720637a0070SStefano Zampini   ierr = PetscFree(B->defaultvectype);CHKERRQ(ierr);
1721637a0070SStefano Zampini   ierr = PetscStrallocpy(VECCUDA,&B->defaultvectype);CHKERRQ(ierr);
1722637a0070SStefano Zampini   ierr = PetscObjectChangeTypeName((PetscObject)B,MATMPIDENSECUDA);CHKERRQ(ierr);
1723637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_mpidensecuda_mpidense_C",                    MatConvert_MPIDenseCUDA_MPIDense);CHKERRQ(ierr);
1724637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaij_mpidensecuda_C",        MatProductSetFromOptions_MPIAIJ_MPIDense);CHKERRQ(ierr);
17256718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpiaijcusparse_mpidensecuda_C",MatProductSetFromOptions_MPIAIJ_MPIDense);CHKERRQ(ierr);
1726637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaij_C",        MatProductSetFromOptions_MPIDense_MPIAIJ);CHKERRQ(ierr);
17276718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatProductSetFromOptions_mpidensecuda_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ);CHKERRQ(ierr);
1728637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArray_C",                                MatDenseCUDAGetArray_MPIDenseCUDA);CHKERRQ(ierr);
1729637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayRead_C",                            MatDenseCUDAGetArrayRead_MPIDenseCUDA);CHKERRQ(ierr);
1730637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAGetArrayWrite_C",                           MatDenseCUDAGetArrayWrite_MPIDenseCUDA);CHKERRQ(ierr);
1731637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArray_C",                            MatDenseCUDARestoreArray_MPIDenseCUDA);CHKERRQ(ierr);
1732637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayRead_C",                        MatDenseCUDARestoreArrayRead_MPIDenseCUDA);CHKERRQ(ierr);
1733637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDARestoreArrayWrite_C",                       MatDenseCUDARestoreArrayWrite_MPIDenseCUDA);CHKERRQ(ierr);
1734637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAPlaceArray_C",                              MatDenseCUDAPlaceArray_MPIDenseCUDA);CHKERRQ(ierr);
1735637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAResetArray_C",                              MatDenseCUDAResetArray_MPIDenseCUDA);CHKERRQ(ierr);
1736d5ea218eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)B,"MatDenseCUDAReplaceArray_C",                            MatDenseCUDAReplaceArray_MPIDenseCUDA);CHKERRQ(ierr);
1737*f5ff9c66SStefano Zampini   m    = (Mat_MPIDense*)(B->data);
1738637a0070SStefano Zampini   if (m->A) {
1739637a0070SStefano Zampini     ierr = MatConvert(m->A,MATSEQDENSECUDA,MAT_INPLACE_MATRIX,&m->A);CHKERRQ(ierr);
1740637a0070SStefano Zampini     ierr = MatSetUpMultiply_MPIDense(B);CHKERRQ(ierr);
1741637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_BOTH;
1742637a0070SStefano Zampini   } else {
1743637a0070SStefano Zampini     B->offloadmask = PETSC_OFFLOAD_UNALLOCATED;
1744637a0070SStefano Zampini   }
1745637a0070SStefano Zampini   ierr = MatBindToCPU_MPIDenseCUDA(B,PETSC_FALSE);CHKERRQ(ierr);
1746637a0070SStefano Zampini 
1747637a0070SStefano Zampini   B->ops->bindtocpu = MatBindToCPU_MPIDenseCUDA;
1748637a0070SStefano Zampini   PetscFunctionReturn(0);
1749637a0070SStefano Zampini }
1750637a0070SStefano Zampini #endif
1751637a0070SStefano Zampini 
17526947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
17536947451fSStefano Zampini {
17546947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17556947451fSStefano Zampini   PetscErrorCode ierr;
17566947451fSStefano Zampini   PetscInt       lda;
17576947451fSStefano Zampini 
17586947451fSStefano Zampini   PetscFunctionBegin;
1759616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1760616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17616947451fSStefano Zampini   if (!a->cvec) {
17626947451fSStefano Zampini     ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
17636947451fSStefano Zampini   }
17646947451fSStefano Zampini   a->vecinuse = col + 1;
17656947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
17666947451fSStefano Zampini   ierr = MatDenseGetArray(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
17676947451fSStefano Zampini   ierr = VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
17686947451fSStefano Zampini   *v   = a->cvec;
17696947451fSStefano Zampini   PetscFunctionReturn(0);
17706947451fSStefano Zampini }
17716947451fSStefano Zampini 
17726947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVec_MPIDense(Mat A,PetscInt col,Vec *v)
17736947451fSStefano Zampini {
17746947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17756947451fSStefano Zampini   PetscErrorCode ierr;
17766947451fSStefano Zampini 
17776947451fSStefano Zampini   PetscFunctionBegin;
17785ea7661aSPierre Jolivet   if (!a->vecinuse) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
17796947451fSStefano Zampini   if (!a->cvec) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Missing internal column vector");
17806947451fSStefano Zampini   a->vecinuse = 0;
17816947451fSStefano Zampini   ierr = MatDenseRestoreArray(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
17826947451fSStefano Zampini   ierr = VecResetArray(a->cvec);CHKERRQ(ierr);
17836947451fSStefano Zampini   *v   = NULL;
17846947451fSStefano Zampini   PetscFunctionReturn(0);
17856947451fSStefano Zampini }
17866947451fSStefano Zampini 
17876947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
17886947451fSStefano Zampini {
17896947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
17906947451fSStefano Zampini   PetscErrorCode ierr;
17916947451fSStefano Zampini   PetscInt       lda;
17926947451fSStefano Zampini 
17936947451fSStefano Zampini   PetscFunctionBegin;
1794616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1795616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
17966947451fSStefano Zampini   if (!a->cvec) {
17976947451fSStefano Zampini     ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
17986947451fSStefano Zampini   }
17996947451fSStefano Zampini   a->vecinuse = col + 1;
18006947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
18016947451fSStefano Zampini   ierr = MatDenseGetArrayRead(a->A,&a->ptrinuse);CHKERRQ(ierr);
18026947451fSStefano Zampini   ierr = VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
18036947451fSStefano Zampini   ierr = VecLockReadPush(a->cvec);CHKERRQ(ierr);
18046947451fSStefano Zampini   *v   = a->cvec;
18056947451fSStefano Zampini   PetscFunctionReturn(0);
18066947451fSStefano Zampini }
18076947451fSStefano Zampini 
18086947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecRead_MPIDense(Mat A,PetscInt col,Vec *v)
18096947451fSStefano Zampini {
18106947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
18116947451fSStefano Zampini   PetscErrorCode ierr;
18126947451fSStefano Zampini 
18136947451fSStefano Zampini   PetscFunctionBegin;
1814616b8fbbSStefano Zampini   if (!a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
1815616b8fbbSStefano Zampini   if (!a->cvec) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
18166947451fSStefano Zampini   a->vecinuse = 0;
18176947451fSStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,&a->ptrinuse);CHKERRQ(ierr);
18186947451fSStefano Zampini   ierr = VecLockReadPop(a->cvec);CHKERRQ(ierr);
18196947451fSStefano Zampini   ierr = VecResetArray(a->cvec);CHKERRQ(ierr);
18206947451fSStefano Zampini   *v   = NULL;
18216947451fSStefano Zampini   PetscFunctionReturn(0);
18226947451fSStefano Zampini }
18236947451fSStefano Zampini 
18246947451fSStefano Zampini PetscErrorCode MatDenseGetColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
18256947451fSStefano Zampini {
18266947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
18276947451fSStefano Zampini   PetscErrorCode ierr;
18286947451fSStefano Zampini   PetscInt       lda;
18296947451fSStefano Zampini 
18306947451fSStefano Zampini   PetscFunctionBegin;
1831616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1832616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18336947451fSStefano Zampini   if (!a->cvec) {
18346947451fSStefano Zampini     ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),A->rmap->bs,A->rmap->n,A->rmap->N,NULL,&a->cvec);CHKERRQ(ierr);
18356947451fSStefano Zampini   }
18366947451fSStefano Zampini   a->vecinuse = col + 1;
18376947451fSStefano Zampini   ierr = MatDenseGetLDA(a->A,&lda);CHKERRQ(ierr);
18386947451fSStefano Zampini   ierr = MatDenseGetArrayWrite(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
18396947451fSStefano Zampini   ierr = VecPlaceArray(a->cvec,a->ptrinuse + (size_t)col * (size_t)lda);CHKERRQ(ierr);
18406947451fSStefano Zampini   *v   = a->cvec;
18416947451fSStefano Zampini   PetscFunctionReturn(0);
18426947451fSStefano Zampini }
18436947451fSStefano Zampini 
18446947451fSStefano Zampini PetscErrorCode MatDenseRestoreColumnVecWrite_MPIDense(Mat A,PetscInt col,Vec *v)
18456947451fSStefano Zampini {
18466947451fSStefano Zampini   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
18476947451fSStefano Zampini   PetscErrorCode ierr;
18486947451fSStefano Zampini 
18496947451fSStefano Zampini   PetscFunctionBegin;
1850616b8fbbSStefano Zampini   if (!a->vecinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetColumnVec() first");
1851616b8fbbSStefano Zampini   if (!a->cvec) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal column vector");
18526947451fSStefano Zampini   a->vecinuse = 0;
18536947451fSStefano Zampini   ierr = MatDenseRestoreArrayWrite(a->A,(PetscScalar**)&a->ptrinuse);CHKERRQ(ierr);
18546947451fSStefano Zampini   ierr = VecResetArray(a->cvec);CHKERRQ(ierr);
18556947451fSStefano Zampini   *v   = NULL;
18566947451fSStefano Zampini   PetscFunctionReturn(0);
18576947451fSStefano Zampini }
18586947451fSStefano Zampini 
18595ea7661aSPierre Jolivet PetscErrorCode MatDenseGetSubMatrix_MPIDense(Mat A,PetscInt cbegin,PetscInt cend,Mat *v)
18605ea7661aSPierre Jolivet {
18615ea7661aSPierre Jolivet   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
1862616b8fbbSStefano Zampini   Mat_MPIDense   *c;
18635ea7661aSPierre Jolivet   PetscErrorCode ierr;
1864616b8fbbSStefano Zampini   MPI_Comm       comm;
1865616b8fbbSStefano Zampini   PetscBool      setup = PETSC_FALSE;
18665ea7661aSPierre Jolivet 
18675ea7661aSPierre Jolivet   PetscFunctionBegin;
1868616b8fbbSStefano Zampini   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
1869616b8fbbSStefano Zampini   if (a->vecinuse) SETERRQ(comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreColumnVec() first");
1870616b8fbbSStefano Zampini   if (a->matinuse) SETERRQ(comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
18715ea7661aSPierre Jolivet   if (!a->cmat) {
1872616b8fbbSStefano Zampini     setup = PETSC_TRUE;
1873616b8fbbSStefano Zampini     ierr = MatCreate(comm,&a->cmat);CHKERRQ(ierr);
1874616b8fbbSStefano Zampini     ierr = PetscLogObjectParent((PetscObject)A,(PetscObject)a->cmat);CHKERRQ(ierr);
1875616b8fbbSStefano Zampini     ierr = MatSetType(a->cmat,((PetscObject)A)->type_name);CHKERRQ(ierr);
1876616b8fbbSStefano Zampini     ierr = PetscLayoutReference(A->rmap,&a->cmat->rmap);CHKERRQ(ierr);
1877616b8fbbSStefano Zampini     ierr = PetscLayoutSetSize(a->cmat->cmap,cend-cbegin);CHKERRQ(ierr);
1878616b8fbbSStefano Zampini     ierr = PetscLayoutSetUp(a->cmat->cmap);CHKERRQ(ierr);
1879616b8fbbSStefano Zampini   } else if (cend-cbegin != a->cmat->cmap->N) {
1880616b8fbbSStefano Zampini     setup = PETSC_TRUE;
1881616b8fbbSStefano Zampini     ierr = PetscLayoutDestroy(&a->cmat->cmap);CHKERRQ(ierr);
1882616b8fbbSStefano Zampini     ierr = PetscLayoutCreate(comm,&a->cmat->cmap);CHKERRQ(ierr);
1883616b8fbbSStefano Zampini     ierr = PetscLayoutSetSize(a->cmat->cmap,cend-cbegin);CHKERRQ(ierr);
1884616b8fbbSStefano Zampini     ierr = PetscLayoutSetUp(a->cmat->cmap);CHKERRQ(ierr);
18855ea7661aSPierre Jolivet   }
1886616b8fbbSStefano Zampini   c = (Mat_MPIDense*)a->cmat->data;
1887616b8fbbSStefano Zampini   if (c->A) SETERRQ(comm,PETSC_ERR_ORDER,"Need to call MatDenseRestoreSubMatrix() first");
1888616b8fbbSStefano Zampini   ierr = MatDenseGetSubMatrix(a->A,cbegin,cend,&c->A);CHKERRQ(ierr);
1889616b8fbbSStefano Zampini   if (setup) { /* do we really need this? */
1890616b8fbbSStefano Zampini     ierr = MatSetUpMultiply_MPIDense(a->cmat);CHKERRQ(ierr);
1891616b8fbbSStefano Zampini   }
1892616b8fbbSStefano Zampini   a->cmat->preallocated = PETSC_TRUE;
1893616b8fbbSStefano Zampini   a->cmat->assembled = PETSC_TRUE;
18945ea7661aSPierre Jolivet   a->matinuse = cbegin + 1;
18955ea7661aSPierre Jolivet   *v = a->cmat;
18965ea7661aSPierre Jolivet   PetscFunctionReturn(0);
18975ea7661aSPierre Jolivet }
18985ea7661aSPierre Jolivet 
18995ea7661aSPierre Jolivet PetscErrorCode MatDenseRestoreSubMatrix_MPIDense(Mat A,Mat *v)
19005ea7661aSPierre Jolivet {
19015ea7661aSPierre Jolivet   Mat_MPIDense   *a = (Mat_MPIDense*)A->data;
1902616b8fbbSStefano Zampini   Mat_MPIDense   *c;
19035ea7661aSPierre Jolivet   PetscErrorCode ierr;
19045ea7661aSPierre Jolivet 
19055ea7661aSPierre Jolivet   PetscFunctionBegin;
1906616b8fbbSStefano Zampini   if (!a->matinuse) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_ORDER,"Need to call MatDenseGetSubMatrix() first");
1907616b8fbbSStefano Zampini   if (!a->cmat) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"Missing internal matrix");
1908616b8fbbSStefano Zampini   if (*v != a->cmat) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_WRONG,"Not the matrix obtained from MatDenseGetSubMatrix()");
19095ea7661aSPierre Jolivet   a->matinuse = 0;
1910616b8fbbSStefano Zampini   c    = (Mat_MPIDense*)a->cmat->data;
1911616b8fbbSStefano Zampini   ierr = MatDenseRestoreSubMatrix(a->A,&c->A);CHKERRQ(ierr);
19125ea7661aSPierre Jolivet   *v   = NULL;
19135ea7661aSPierre Jolivet   PetscFunctionReturn(0);
19145ea7661aSPierre Jolivet }
19155ea7661aSPierre Jolivet 
1916002bc6daSRichard Tran Mills /*MC
1917002bc6daSRichard Tran Mills    MATMPIDENSE - MATMPIDENSE = "mpidense" - A matrix type to be used for distributed dense matrices.
1918002bc6daSRichard Tran Mills 
1919002bc6daSRichard Tran Mills    Options Database Keys:
1920002bc6daSRichard Tran Mills . -mat_type mpidense - sets the matrix type to "mpidense" during a call to MatSetFromOptions()
1921002bc6daSRichard Tran Mills 
1922002bc6daSRichard Tran Mills   Level: beginner
1923002bc6daSRichard Tran Mills 
1924002bc6daSRichard Tran Mills .seealso: MatCreateDense()
1925002bc6daSRichard Tran Mills 
1926002bc6daSRichard Tran Mills M*/
19278cc058d9SJed Brown PETSC_EXTERN PetscErrorCode MatCreate_MPIDense(Mat mat)
1928273d9f13SBarry Smith {
1929273d9f13SBarry Smith   Mat_MPIDense   *a;
1930dfbe8321SBarry Smith   PetscErrorCode ierr;
1931273d9f13SBarry Smith 
1932273d9f13SBarry Smith   PetscFunctionBegin;
1933b00a9115SJed Brown   ierr      = PetscNewLog(mat,&a);CHKERRQ(ierr);
1934b0a32e0cSBarry Smith   mat->data = (void*)a;
1935273d9f13SBarry Smith   ierr      = PetscMemcpy(mat->ops,&MatOps_Values,sizeof(struct _MatOps));CHKERRQ(ierr);
1936273d9f13SBarry Smith 
1937273d9f13SBarry Smith   mat->insertmode = NOT_SET_VALUES;
1938273d9f13SBarry Smith 
1939273d9f13SBarry Smith   /* build cache for off array entries formed */
1940273d9f13SBarry Smith   a->donotstash = PETSC_FALSE;
19412205254eSKarl Rupp 
1942ce94432eSBarry Smith   ierr = MatStashCreate_Private(PetscObjectComm((PetscObject)mat),1,&mat->stash);CHKERRQ(ierr);
1943273d9f13SBarry Smith 
1944273d9f13SBarry Smith   /* stuff used for matrix vector multiply */
1945f4259b30SLisandro Dalcin   a->lvec        = NULL;
1946f4259b30SLisandro Dalcin   a->Mvctx       = NULL;
1947273d9f13SBarry Smith   a->roworiented = PETSC_TRUE;
1948273d9f13SBarry Smith 
194949a6ff4bSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetLDA_C",MatDenseGetLDA_MPIDense);CHKERRQ(ierr);
1950ad16ce7aSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseSetLDA_C",MatDenseSetLDA_MPIDense);CHKERRQ(ierr);
1951bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArray_C",MatDenseGetArray_MPIDense);CHKERRQ(ierr);
19528572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArray_C",MatDenseRestoreArray_MPIDense);CHKERRQ(ierr);
19538572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayRead_C",MatDenseGetArrayRead_MPIDense);CHKERRQ(ierr);
19548572280aSBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayRead_C",MatDenseRestoreArrayRead_MPIDense);CHKERRQ(ierr);
19556947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetArrayWrite_C",MatDenseGetArrayWrite_MPIDense);CHKERRQ(ierr);
19566947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreArrayWrite_C",MatDenseRestoreArrayWrite_MPIDense);CHKERRQ(ierr);
1957d3042a70SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDensePlaceArray_C",MatDensePlaceArray_MPIDense);CHKERRQ(ierr);
1958d3042a70SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseResetArray_C",MatDenseResetArray_MPIDense);CHKERRQ(ierr);
1959d5ea218eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseReplaceArray_C",MatDenseReplaceArray_MPIDense);CHKERRQ(ierr);
19606947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVec_C",MatDenseGetColumnVec_MPIDense);CHKERRQ(ierr);
19616947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVec_C",MatDenseRestoreColumnVec_MPIDense);CHKERRQ(ierr);
19626947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecRead_C",MatDenseGetColumnVecRead_MPIDense);CHKERRQ(ierr);
19636947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecRead_C",MatDenseRestoreColumnVecRead_MPIDense);CHKERRQ(ierr);
19646947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumnVecWrite_C",MatDenseGetColumnVecWrite_MPIDense);CHKERRQ(ierr);
19656947451fSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumnVecWrite_C",MatDenseRestoreColumnVecWrite_MPIDense);CHKERRQ(ierr);
19665ea7661aSPierre Jolivet   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetSubMatrix_C",MatDenseGetSubMatrix_MPIDense);CHKERRQ(ierr);
19675ea7661aSPierre Jolivet   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreSubMatrix_C",MatDenseRestoreSubMatrix_MPIDense);CHKERRQ(ierr);
19684e29119aSPierre Jolivet   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpiaij_mpidense_C",MatConvert_MPIAIJ_MPIDense);CHKERRQ(ierr);
19694e29119aSPierre Jolivet   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpiaij_C",MatConvert_MPIDense_MPIAIJ);CHKERRQ(ierr);
19708baccfbdSHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
19718baccfbdSHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_elemental_C",MatConvert_MPIDense_Elemental);CHKERRQ(ierr);
19728baccfbdSHong Zhang #endif
1973d24d4204SJose E. Roman #if defined(PETSC_HAVE_SCALAPACK)
1974d24d4204SJose E. Roman   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_scalapack_C",MatConvert_Dense_ScaLAPACK);CHKERRQ(ierr);
1975d24d4204SJose E. Roman #endif
1976637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
1977637a0070SStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatConvert_mpidense_mpidensecuda_C",MatConvert_MPIDense_MPIDenseCUDA);CHKERRQ(ierr);
1978637a0070SStefano Zampini #endif
1979bdf89e91SBarry Smith   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatMPIDenseSetPreallocation_C",MatMPIDenseSetPreallocation_MPIDense);CHKERRQ(ierr);
19804222ddf1SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaij_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense);CHKERRQ(ierr);
19814222ddf1SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaij_C",MatProductSetFromOptions_MPIDense_MPIAIJ);CHKERRQ(ierr);
19826718818eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
19836718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpiaijcusparse_mpidense_C",MatProductSetFromOptions_MPIAIJ_MPIDense);CHKERRQ(ierr);
19846718818eSStefano Zampini   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatProductSetFromOptions_mpidense_mpiaijcusparse_C",MatProductSetFromOptions_MPIDense_MPIAIJ);CHKERRQ(ierr);
19856718818eSStefano Zampini #endif
19868949adfdSHong Zhang 
1987af53bab2SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseGetColumn_C",MatDenseGetColumn_MPIDense);CHKERRQ(ierr);
1988af53bab2SHong Zhang   ierr = PetscObjectComposeFunction((PetscObject)mat,"MatDenseRestoreColumn_C",MatDenseRestoreColumn_MPIDense);CHKERRQ(ierr);
198938aed534SBarry Smith   ierr = PetscObjectChangeTypeName((PetscObject)mat,MATMPIDENSE);CHKERRQ(ierr);
1990273d9f13SBarry Smith   PetscFunctionReturn(0);
1991273d9f13SBarry Smith }
1992273d9f13SBarry Smith 
1993209238afSKris Buschelman /*MC
1994637a0070SStefano Zampini    MATMPIDENSECUDA - MATMPIDENSECUDA = "mpidensecuda" - A matrix type to be used for distributed dense matrices on GPUs.
1995637a0070SStefano Zampini 
1996637a0070SStefano Zampini    Options Database Keys:
1997637a0070SStefano Zampini . -mat_type mpidensecuda - sets the matrix type to "mpidensecuda" during a call to MatSetFromOptions()
1998637a0070SStefano Zampini 
1999637a0070SStefano Zampini   Level: beginner
2000637a0070SStefano Zampini 
2001637a0070SStefano Zampini .seealso:
2002637a0070SStefano Zampini 
2003637a0070SStefano Zampini M*/
2004637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2005637a0070SStefano Zampini PETSC_EXTERN PetscErrorCode MatCreate_MPIDenseCUDA(Mat B)
2006637a0070SStefano Zampini {
2007637a0070SStefano Zampini   PetscErrorCode ierr;
2008637a0070SStefano Zampini 
2009637a0070SStefano Zampini   PetscFunctionBegin;
201005035670SJunchao Zhang   ierr = PetscCUDAInitializeCheck();CHKERRQ(ierr);
2011637a0070SStefano Zampini   ierr = MatCreate_MPIDense(B);CHKERRQ(ierr);
2012637a0070SStefano Zampini   ierr = MatConvert_MPIDense_MPIDenseCUDA(B,MATMPIDENSECUDA,MAT_INPLACE_MATRIX,&B);CHKERRQ(ierr);
2013637a0070SStefano Zampini   PetscFunctionReturn(0);
2014637a0070SStefano Zampini }
2015637a0070SStefano Zampini #endif
2016637a0070SStefano Zampini 
2017637a0070SStefano Zampini /*MC
2018002d173eSKris Buschelman    MATDENSE - MATDENSE = "dense" - A matrix type to be used for dense matrices.
2019209238afSKris Buschelman 
2020209238afSKris Buschelman    This matrix type is identical to MATSEQDENSE when constructed with a single process communicator,
2021209238afSKris Buschelman    and MATMPIDENSE otherwise.
2022209238afSKris Buschelman 
2023209238afSKris Buschelman    Options Database Keys:
2024209238afSKris Buschelman . -mat_type dense - sets the matrix type to "dense" during a call to MatSetFromOptions()
2025209238afSKris Buschelman 
2026209238afSKris Buschelman   Level: beginner
2027209238afSKris Buschelman 
202801b82886SBarry Smith 
20296947451fSStefano Zampini .seealso: MATSEQDENSE,MATMPIDENSE,MATDENSECUDA
20306947451fSStefano Zampini M*/
20316947451fSStefano Zampini 
20326947451fSStefano Zampini /*MC
20336947451fSStefano Zampini    MATDENSECUDA - MATDENSECUDA = "densecuda" - A matrix type to be used for dense matrices on GPUs.
20346947451fSStefano Zampini 
20356947451fSStefano Zampini    This matrix type is identical to MATSEQDENSECUDA when constructed with a single process communicator,
20366947451fSStefano Zampini    and MATMPIDENSECUDA otherwise.
20376947451fSStefano Zampini 
20386947451fSStefano Zampini    Options Database Keys:
20396947451fSStefano Zampini . -mat_type densecuda - sets the matrix type to "densecuda" during a call to MatSetFromOptions()
20406947451fSStefano Zampini 
20416947451fSStefano Zampini   Level: beginner
20426947451fSStefano Zampini 
20436947451fSStefano Zampini .seealso: MATSEQDENSECUDA,MATMPIDENSECUDA,MATDENSE
2044209238afSKris Buschelman M*/
2045209238afSKris Buschelman 
2046273d9f13SBarry Smith /*@C
2047273d9f13SBarry Smith    MatMPIDenseSetPreallocation - Sets the array used to store the matrix entries
2048273d9f13SBarry Smith 
20498f490ea3SStefano Zampini    Collective
2050273d9f13SBarry Smith 
2051273d9f13SBarry Smith    Input Parameters:
20521c4f3114SJed Brown .  B - the matrix
20530298fd71SBarry Smith -  data - optional location of matrix data.  Set data=NULL for PETSc
2054273d9f13SBarry Smith    to control all matrix memory allocation.
2055273d9f13SBarry Smith 
2056273d9f13SBarry Smith    Notes:
2057273d9f13SBarry Smith    The dense format is fully compatible with standard Fortran 77
2058273d9f13SBarry Smith    storage by columns.
2059273d9f13SBarry Smith 
2060273d9f13SBarry Smith    The data input variable is intended primarily for Fortran programmers
2061273d9f13SBarry Smith    who wish to allocate their own matrix memory space.  Most users should
20620298fd71SBarry Smith    set data=NULL.
2063273d9f13SBarry Smith 
2064273d9f13SBarry Smith    Level: intermediate
2065273d9f13SBarry Smith 
2066273d9f13SBarry Smith .seealso: MatCreate(), MatCreateSeqDense(), MatSetValues()
2067273d9f13SBarry Smith @*/
20681c4f3114SJed Brown PetscErrorCode  MatMPIDenseSetPreallocation(Mat B,PetscScalar *data)
2069273d9f13SBarry Smith {
20704ac538c5SBarry Smith   PetscErrorCode ierr;
2071273d9f13SBarry Smith 
2072273d9f13SBarry Smith   PetscFunctionBegin;
2073d5ea218eSStefano Zampini   PetscValidHeaderSpecific(B,MAT_CLASSID,1);
20741c4f3114SJed Brown   ierr = PetscTryMethod(B,"MatMPIDenseSetPreallocation_C",(Mat,PetscScalar*),(B,data));CHKERRQ(ierr);
2075273d9f13SBarry Smith   PetscFunctionReturn(0);
2076273d9f13SBarry Smith }
2077273d9f13SBarry Smith 
2078d3042a70SBarry Smith /*@
2079637a0070SStefano Zampini    MatDensePlaceArray - Allows one to replace the array in a dense matrix with an
2080d3042a70SBarry Smith    array provided by the user. This is useful to avoid copying an array
2081d3042a70SBarry Smith    into a matrix
2082d3042a70SBarry Smith 
2083d3042a70SBarry Smith    Not Collective
2084d3042a70SBarry Smith 
2085d3042a70SBarry Smith    Input Parameters:
2086d3042a70SBarry Smith +  mat - the matrix
2087d3042a70SBarry Smith -  array - the array in column major order
2088d3042a70SBarry Smith 
2089d3042a70SBarry Smith    Notes:
2090d3042a70SBarry Smith    You can return to the original array with a call to MatDenseResetArray(). The user is responsible for freeing this array; it will not be
2091d3042a70SBarry Smith    freed when the matrix is destroyed.
2092d3042a70SBarry Smith 
2093d3042a70SBarry Smith    Level: developer
2094d3042a70SBarry Smith 
2095d3042a70SBarry Smith .seealso: MatDenseGetArray(), MatDenseResetArray(), VecPlaceArray(), VecGetArray(), VecRestoreArray(), VecReplaceArray(), VecResetArray()
2096d3042a70SBarry Smith 
2097d3042a70SBarry Smith @*/
2098637a0070SStefano Zampini PetscErrorCode  MatDensePlaceArray(Mat mat,const PetscScalar *array)
2099d3042a70SBarry Smith {
2100d3042a70SBarry Smith   PetscErrorCode ierr;
2101637a0070SStefano Zampini 
2102d3042a70SBarry Smith   PetscFunctionBegin;
2103d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2104d3042a70SBarry Smith   ierr = PetscUseMethod(mat,"MatDensePlaceArray_C",(Mat,const PetscScalar*),(mat,array));CHKERRQ(ierr);
2105d3042a70SBarry Smith   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2106637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2107637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2108637a0070SStefano Zampini #endif
2109d3042a70SBarry Smith   PetscFunctionReturn(0);
2110d3042a70SBarry Smith }
2111d3042a70SBarry Smith 
2112d3042a70SBarry Smith /*@
2113d3042a70SBarry Smith    MatDenseResetArray - Resets the matrix array to that it previously had before the call to MatDensePlaceArray()
2114d3042a70SBarry Smith 
2115d3042a70SBarry Smith    Not Collective
2116d3042a70SBarry Smith 
2117d3042a70SBarry Smith    Input Parameters:
2118d3042a70SBarry Smith .  mat - the matrix
2119d3042a70SBarry Smith 
2120d3042a70SBarry Smith    Notes:
2121d3042a70SBarry Smith    You can only call this after a call to MatDensePlaceArray()
2122d3042a70SBarry Smith 
2123d3042a70SBarry Smith    Level: developer
2124d3042a70SBarry Smith 
2125d3042a70SBarry Smith .seealso: MatDenseGetArray(), MatDensePlaceArray(), VecPlaceArray(), VecGetArray(), VecRestoreArray(), VecReplaceArray(), VecResetArray()
2126d3042a70SBarry Smith 
2127d3042a70SBarry Smith @*/
2128d3042a70SBarry Smith PetscErrorCode  MatDenseResetArray(Mat mat)
2129d3042a70SBarry Smith {
2130d3042a70SBarry Smith   PetscErrorCode ierr;
2131637a0070SStefano Zampini 
2132d3042a70SBarry Smith   PetscFunctionBegin;
2133d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2134d3042a70SBarry Smith   ierr = PetscUseMethod(mat,"MatDenseResetArray_C",(Mat),(mat));CHKERRQ(ierr);
2135d3042a70SBarry Smith   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2136d3042a70SBarry Smith   PetscFunctionReturn(0);
2137d3042a70SBarry Smith }
2138d3042a70SBarry Smith 
2139d5ea218eSStefano Zampini /*@
2140d5ea218eSStefano Zampini    MatDenseReplaceArray - Allows one to replace the array in a dense matrix with an
2141d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2142d5ea218eSStefano Zampini    into a matrix
2143d5ea218eSStefano Zampini 
2144d5ea218eSStefano Zampini    Not Collective
2145d5ea218eSStefano Zampini 
2146d5ea218eSStefano Zampini    Input Parameters:
2147d5ea218eSStefano Zampini +  mat - the matrix
2148d5ea218eSStefano Zampini -  array - the array in column major order
2149d5ea218eSStefano Zampini 
2150d5ea218eSStefano Zampini    Notes:
2151d5ea218eSStefano Zampini    The memory passed in MUST be obtained with PetscMalloc() and CANNOT be
2152d5ea218eSStefano Zampini    freed by the user. It will be freed when the matrix is destroyed.
2153d5ea218eSStefano Zampini 
2154d5ea218eSStefano Zampini    Level: developer
2155d5ea218eSStefano Zampini 
2156d5ea218eSStefano Zampini .seealso: MatDenseGetArray(), VecReplaceArray()
2157d5ea218eSStefano Zampini @*/
2158d5ea218eSStefano Zampini PetscErrorCode  MatDenseReplaceArray(Mat mat,const PetscScalar *array)
2159d5ea218eSStefano Zampini {
2160d5ea218eSStefano Zampini   PetscErrorCode ierr;
2161d5ea218eSStefano Zampini 
2162d5ea218eSStefano Zampini   PetscFunctionBegin;
2163d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2164d5ea218eSStefano Zampini   ierr = PetscUseMethod(mat,"MatDenseReplaceArray_C",(Mat,const PetscScalar*),(mat,array));CHKERRQ(ierr);
2165d5ea218eSStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2166d5ea218eSStefano Zampini #if defined(PETSC_HAVE_CUDA)
2167d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_CPU;
2168d5ea218eSStefano Zampini #endif
2169d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2170d5ea218eSStefano Zampini }
2171d5ea218eSStefano Zampini 
2172637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
21738965ea79SLois Curfman McInnes /*@C
2174637a0070SStefano Zampini    MatDenseCUDAPlaceArray - Allows one to replace the GPU array in a dense matrix with an
2175637a0070SStefano Zampini    array provided by the user. This is useful to avoid copying an array
2176637a0070SStefano Zampini    into a matrix
2177637a0070SStefano Zampini 
2178637a0070SStefano Zampini    Not Collective
2179637a0070SStefano Zampini 
2180637a0070SStefano Zampini    Input Parameters:
2181637a0070SStefano Zampini +  mat - the matrix
2182637a0070SStefano Zampini -  array - the array in column major order
2183637a0070SStefano Zampini 
2184637a0070SStefano Zampini    Notes:
2185637a0070SStefano Zampini    You can return to the original array with a call to MatDenseCUDAResetArray(). The user is responsible for freeing this array; it will not be
2186637a0070SStefano Zampini    freed when the matrix is destroyed. The array must have been allocated with cudaMalloc().
2187637a0070SStefano Zampini 
2188637a0070SStefano Zampini    Level: developer
2189637a0070SStefano Zampini 
2190637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAResetArray()
2191637a0070SStefano Zampini @*/
2192637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAPlaceArray(Mat mat,const PetscScalar *array)
2193637a0070SStefano Zampini {
2194637a0070SStefano Zampini   PetscErrorCode ierr;
2195637a0070SStefano Zampini 
2196637a0070SStefano Zampini   PetscFunctionBegin;
2197d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2198637a0070SStefano Zampini   ierr = PetscUseMethod(mat,"MatDenseCUDAPlaceArray_C",(Mat,const PetscScalar*),(mat,array));CHKERRQ(ierr);
2199637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2200637a0070SStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2201637a0070SStefano Zampini   PetscFunctionReturn(0);
2202637a0070SStefano Zampini }
2203637a0070SStefano Zampini 
2204637a0070SStefano Zampini /*@C
2205637a0070SStefano Zampini    MatDenseCUDAResetArray - Resets the matrix array to that it previously had before the call to MatDenseCUDAPlaceArray()
2206637a0070SStefano Zampini 
2207637a0070SStefano Zampini    Not Collective
2208637a0070SStefano Zampini 
2209637a0070SStefano Zampini    Input Parameters:
2210637a0070SStefano Zampini .  mat - the matrix
2211637a0070SStefano Zampini 
2212637a0070SStefano Zampini    Notes:
2213637a0070SStefano Zampini    You can only call this after a call to MatDenseCUDAPlaceArray()
2214637a0070SStefano Zampini 
2215637a0070SStefano Zampini    Level: developer
2216637a0070SStefano Zampini 
2217637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAPlaceArray()
2218637a0070SStefano Zampini 
2219637a0070SStefano Zampini @*/
2220637a0070SStefano Zampini PetscErrorCode  MatDenseCUDAResetArray(Mat mat)
2221637a0070SStefano Zampini {
2222637a0070SStefano Zampini   PetscErrorCode ierr;
2223637a0070SStefano Zampini 
2224637a0070SStefano Zampini   PetscFunctionBegin;
2225d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2226637a0070SStefano Zampini   ierr = PetscUseMethod(mat,"MatDenseCUDAResetArray_C",(Mat),(mat));CHKERRQ(ierr);
2227637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2228637a0070SStefano Zampini   PetscFunctionReturn(0);
2229637a0070SStefano Zampini }
2230637a0070SStefano Zampini 
2231637a0070SStefano Zampini /*@C
2232d5ea218eSStefano Zampini    MatDenseCUDAReplaceArray - Allows one to replace the GPU array in a dense matrix with an
2233d5ea218eSStefano Zampini    array provided by the user. This is useful to avoid copying an array
2234d5ea218eSStefano Zampini    into a matrix
2235d5ea218eSStefano Zampini 
2236d5ea218eSStefano Zampini    Not Collective
2237d5ea218eSStefano Zampini 
2238d5ea218eSStefano Zampini    Input Parameters:
2239d5ea218eSStefano Zampini +  mat - the matrix
2240d5ea218eSStefano Zampini -  array - the array in column major order
2241d5ea218eSStefano Zampini 
2242d5ea218eSStefano Zampini    Notes:
2243d5ea218eSStefano Zampini    This permanently replaces the GPU array and frees the memory associated with the old GPU array.
2244d5ea218eSStefano Zampini    The memory passed in CANNOT be freed by the user. It will be freed
2245d5ea218eSStefano Zampini    when the matrix is destroyed. The array should respect the matrix leading dimension.
2246d5ea218eSStefano Zampini 
2247d5ea218eSStefano Zampini    Level: developer
2248d5ea218eSStefano Zampini 
2249d5ea218eSStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDAPlaceArray(), MatDenseCUDAResetArray()
2250d5ea218eSStefano Zampini @*/
2251d5ea218eSStefano Zampini PetscErrorCode  MatDenseCUDAReplaceArray(Mat mat,const PetscScalar *array)
2252d5ea218eSStefano Zampini {
2253d5ea218eSStefano Zampini   PetscErrorCode ierr;
2254d5ea218eSStefano Zampini 
2255d5ea218eSStefano Zampini   PetscFunctionBegin;
2256d5ea218eSStefano Zampini   PetscValidHeaderSpecific(mat,MAT_CLASSID,1);
2257d5ea218eSStefano Zampini   ierr = PetscUseMethod(mat,"MatDenseCUDAReplaceArray_C",(Mat,const PetscScalar*),(mat,array));CHKERRQ(ierr);
2258d5ea218eSStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)mat);CHKERRQ(ierr);
2259d5ea218eSStefano Zampini   mat->offloadmask = PETSC_OFFLOAD_GPU;
2260d5ea218eSStefano Zampini   PetscFunctionReturn(0);
2261d5ea218eSStefano Zampini }
2262d5ea218eSStefano Zampini 
2263d5ea218eSStefano Zampini /*@C
2264637a0070SStefano Zampini    MatDenseCUDAGetArrayWrite - Provides write access to the CUDA buffer inside a dense matrix.
2265637a0070SStefano Zampini 
2266637a0070SStefano Zampini    Not Collective
2267637a0070SStefano Zampini 
2268637a0070SStefano Zampini    Input Parameters:
2269637a0070SStefano Zampini .  A - the matrix
2270637a0070SStefano Zampini 
2271637a0070SStefano Zampini    Output Parameters
2272637a0070SStefano Zampini .  array - the GPU array in column major order
2273637a0070SStefano Zampini 
2274637a0070SStefano Zampini    Notes:
2275637a0070SStefano Zampini    The data on the GPU may not be updated due to operations done on the CPU. If you need updated data, use MatDenseCUDAGetArray(). The array must be restored with MatDenseCUDARestoreArrayWrite() when no longer needed.
2276637a0070SStefano Zampini 
2277637a0070SStefano Zampini    Level: developer
2278637a0070SStefano Zampini 
2279637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayRead(), MatDenseCUDARestoreArrayRead()
2280637a0070SStefano Zampini @*/
2281637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayWrite(Mat A, PetscScalar **a)
2282637a0070SStefano Zampini {
2283637a0070SStefano Zampini   PetscErrorCode ierr;
2284637a0070SStefano Zampini 
2285637a0070SStefano Zampini   PetscFunctionBegin;
2286d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2287637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDAGetArrayWrite_C",(Mat,PetscScalar**),(A,a));CHKERRQ(ierr);
2288637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr);
2289637a0070SStefano Zampini   PetscFunctionReturn(0);
2290637a0070SStefano Zampini }
2291637a0070SStefano Zampini 
2292637a0070SStefano Zampini /*@C
2293637a0070SStefano Zampini    MatDenseCUDARestoreArrayWrite - Restore write access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArrayWrite().
2294637a0070SStefano Zampini 
2295637a0070SStefano Zampini    Not Collective
2296637a0070SStefano Zampini 
2297637a0070SStefano Zampini    Input Parameters:
2298637a0070SStefano Zampini +  A - the matrix
2299637a0070SStefano Zampini -  array - the GPU array in column major order
2300637a0070SStefano Zampini 
2301637a0070SStefano Zampini    Notes:
2302637a0070SStefano Zampini 
2303637a0070SStefano Zampini    Level: developer
2304637a0070SStefano Zampini 
2305637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead(), MatDenseCUDAGetArrayRead()
2306637a0070SStefano Zampini @*/
2307637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayWrite(Mat A, PetscScalar **a)
2308637a0070SStefano Zampini {
2309637a0070SStefano Zampini   PetscErrorCode ierr;
2310637a0070SStefano Zampini 
2311637a0070SStefano Zampini   PetscFunctionBegin;
2312d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2313637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDARestoreArrayWrite_C",(Mat,PetscScalar**),(A,a));CHKERRQ(ierr);
2314637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr);
2315637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2316637a0070SStefano Zampini   PetscFunctionReturn(0);
2317637a0070SStefano Zampini }
2318637a0070SStefano Zampini 
2319637a0070SStefano Zampini /*@C
2320637a0070SStefano Zampini    MatDenseCUDAGetArrayRead - Provides read-only access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArrayRead() when no longer needed.
2321637a0070SStefano Zampini 
2322637a0070SStefano Zampini    Not Collective
2323637a0070SStefano Zampini 
2324637a0070SStefano Zampini    Input Parameters:
2325637a0070SStefano Zampini .  A - the matrix
2326637a0070SStefano Zampini 
2327637a0070SStefano Zampini    Output Parameters
2328637a0070SStefano Zampini .  array - the GPU array in column major order
2329637a0070SStefano Zampini 
2330637a0070SStefano Zampini    Notes:
2331637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2332637a0070SStefano Zampini 
2333637a0070SStefano Zampini    Level: developer
2334637a0070SStefano Zampini 
2335637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead()
2336637a0070SStefano Zampini @*/
2337637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArrayRead(Mat A, const PetscScalar **a)
2338637a0070SStefano Zampini {
2339637a0070SStefano Zampini   PetscErrorCode ierr;
2340637a0070SStefano Zampini 
2341637a0070SStefano Zampini   PetscFunctionBegin;
2342d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2343637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDAGetArrayRead_C",(Mat,const PetscScalar**),(A,a));CHKERRQ(ierr);
2344637a0070SStefano Zampini   PetscFunctionReturn(0);
2345637a0070SStefano Zampini }
2346637a0070SStefano Zampini 
2347637a0070SStefano Zampini /*@C
2348637a0070SStefano Zampini    MatDenseCUDARestoreArrayRead - Restore read-only access to the CUDA buffer inside a dense matrix previously obtained with a call to MatDenseCUDAGetArrayRead().
2349637a0070SStefano Zampini 
2350637a0070SStefano Zampini    Not Collective
2351637a0070SStefano Zampini 
2352637a0070SStefano Zampini    Input Parameters:
2353637a0070SStefano Zampini +  A - the matrix
2354637a0070SStefano Zampini -  array - the GPU array in column major order
2355637a0070SStefano Zampini 
2356637a0070SStefano Zampini    Notes:
2357637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite().
2358637a0070SStefano Zampini 
2359637a0070SStefano Zampini    Level: developer
2360637a0070SStefano Zampini 
2361637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDAGetArrayRead()
2362637a0070SStefano Zampini @*/
2363637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArrayRead(Mat A, const PetscScalar **a)
2364637a0070SStefano Zampini {
2365637a0070SStefano Zampini   PetscErrorCode ierr;
2366637a0070SStefano Zampini 
2367637a0070SStefano Zampini   PetscFunctionBegin;
2368637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDARestoreArrayRead_C",(Mat,const PetscScalar**),(A,a));CHKERRQ(ierr);
2369637a0070SStefano Zampini   PetscFunctionReturn(0);
2370637a0070SStefano Zampini }
2371637a0070SStefano Zampini 
2372637a0070SStefano Zampini /*@C
2373637a0070SStefano Zampini    MatDenseCUDAGetArray - Provides access to the CUDA buffer inside a dense matrix. The array must be restored with MatDenseCUDARestoreArray() when no longer needed.
2374637a0070SStefano Zampini 
2375637a0070SStefano Zampini    Not Collective
2376637a0070SStefano Zampini 
2377637a0070SStefano Zampini    Input Parameters:
2378637a0070SStefano Zampini .  A - the matrix
2379637a0070SStefano Zampini 
2380637a0070SStefano Zampini    Output Parameters
2381637a0070SStefano Zampini .  array - the GPU array in column major order
2382637a0070SStefano Zampini 
2383637a0070SStefano Zampini    Notes:
2384637a0070SStefano Zampini    Data can be copied to the GPU due to operations done on the CPU. If you need write only access, use MatDenseCUDAGetArrayWrite(). For read-only access, use MatDenseCUDAGetArrayRead().
2385637a0070SStefano Zampini 
2386637a0070SStefano Zampini    Level: developer
2387637a0070SStefano Zampini 
2388637a0070SStefano Zampini .seealso: MatDenseCUDAGetArrayRead(), MatDenseCUDARestoreArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead()
2389637a0070SStefano Zampini @*/
2390637a0070SStefano Zampini PetscErrorCode MatDenseCUDAGetArray(Mat A, PetscScalar **a)
2391637a0070SStefano Zampini {
2392637a0070SStefano Zampini   PetscErrorCode ierr;
2393637a0070SStefano Zampini 
2394637a0070SStefano Zampini   PetscFunctionBegin;
2395d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2396637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDAGetArray_C",(Mat,PetscScalar**),(A,a));CHKERRQ(ierr);
2397637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr);
2398637a0070SStefano Zampini   PetscFunctionReturn(0);
2399637a0070SStefano Zampini }
2400637a0070SStefano Zampini 
2401637a0070SStefano Zampini /*@C
2402637a0070SStefano Zampini    MatDenseCUDARestoreArray - Restore access to the CUDA buffer inside a dense matrix previously obtained with MatDenseCUDAGetArray().
2403637a0070SStefano Zampini 
2404637a0070SStefano Zampini    Not Collective
2405637a0070SStefano Zampini 
2406637a0070SStefano Zampini    Input Parameters:
2407637a0070SStefano Zampini +  A - the matrix
2408637a0070SStefano Zampini -  array - the GPU array in column major order
2409637a0070SStefano Zampini 
2410637a0070SStefano Zampini    Notes:
2411637a0070SStefano Zampini 
2412637a0070SStefano Zampini    Level: developer
2413637a0070SStefano Zampini 
2414637a0070SStefano Zampini .seealso: MatDenseCUDAGetArray(), MatDenseCUDARestoreArrayWrite(), MatDenseCUDAGetArrayWrite(), MatDenseCUDARestoreArrayRead(), MatDenseCUDAGetArrayRead()
2415637a0070SStefano Zampini @*/
2416637a0070SStefano Zampini PetscErrorCode MatDenseCUDARestoreArray(Mat A, PetscScalar **a)
2417637a0070SStefano Zampini {
2418637a0070SStefano Zampini   PetscErrorCode ierr;
2419637a0070SStefano Zampini 
2420637a0070SStefano Zampini   PetscFunctionBegin;
2421d5ea218eSStefano Zampini   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
2422637a0070SStefano Zampini   ierr = PetscUseMethod(A,"MatDenseCUDARestoreArray_C",(Mat,PetscScalar**),(A,a));CHKERRQ(ierr);
2423637a0070SStefano Zampini   ierr = PetscObjectStateIncrease((PetscObject)A);CHKERRQ(ierr);
2424637a0070SStefano Zampini   A->offloadmask = PETSC_OFFLOAD_GPU;
2425637a0070SStefano Zampini   PetscFunctionReturn(0);
2426637a0070SStefano Zampini }
2427637a0070SStefano Zampini #endif
2428637a0070SStefano Zampini 
2429637a0070SStefano Zampini /*@C
2430637a0070SStefano Zampini    MatCreateDense - Creates a matrix in dense format.
24318965ea79SLois Curfman McInnes 
2432d083f849SBarry Smith    Collective
2433db81eaa0SLois Curfman McInnes 
24348965ea79SLois Curfman McInnes    Input Parameters:
2435db81eaa0SLois Curfman McInnes +  comm - MPI communicator
24368965ea79SLois Curfman McInnes .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2437db81eaa0SLois Curfman McInnes .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
24388965ea79SLois Curfman McInnes .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2439db81eaa0SLois Curfman McInnes .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
24406cfe35ddSJose E. Roman -  data - optional location of matrix data.  Set data=NULL (PETSC_NULL_SCALAR for Fortran users) for PETSc
2441dfc5480cSLois Curfman McInnes    to control all matrix memory allocation.
24428965ea79SLois Curfman McInnes 
24438965ea79SLois Curfman McInnes    Output Parameter:
2444477f1c0bSLois Curfman McInnes .  A - the matrix
24458965ea79SLois Curfman McInnes 
2446b259b22eSLois Curfman McInnes    Notes:
244739ddd567SLois Curfman McInnes    The dense format is fully compatible with standard Fortran 77
244839ddd567SLois Curfman McInnes    storage by columns.
2449002bc6daSRichard Tran Mills    Note that, although local portions of the matrix are stored in column-major
2450002bc6daSRichard Tran Mills    order, the matrix is partitioned across MPI ranks by row.
24518965ea79SLois Curfman McInnes 
245218f449edSLois Curfman McInnes    The data input variable is intended primarily for Fortran programmers
245318f449edSLois Curfman McInnes    who wish to allocate their own matrix memory space.  Most users should
24546cfe35ddSJose E. Roman    set data=NULL (PETSC_NULL_SCALAR for Fortran users).
245518f449edSLois Curfman McInnes 
24568965ea79SLois Curfman McInnes    The user MUST specify either the local or global matrix dimensions
24578965ea79SLois Curfman McInnes    (possibly both).
24588965ea79SLois Curfman McInnes 
2459027ccd11SLois Curfman McInnes    Level: intermediate
2460027ccd11SLois Curfman McInnes 
246139ddd567SLois Curfman McInnes .seealso: MatCreate(), MatCreateSeqDense(), MatSetValues()
24628965ea79SLois Curfman McInnes @*/
246369b1f4b7SBarry Smith PetscErrorCode  MatCreateDense(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
24648965ea79SLois Curfman McInnes {
24656849ba73SBarry Smith   PetscErrorCode ierr;
246613f74950SBarry Smith   PetscMPIInt    size;
24678965ea79SLois Curfman McInnes 
24683a40ed3dSBarry Smith   PetscFunctionBegin;
2469f69a0ea3SMatthew Knepley   ierr = MatCreate(comm,A);CHKERRQ(ierr);
2470f69a0ea3SMatthew Knepley   ierr = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr);
2471ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2472273d9f13SBarry Smith   if (size > 1) {
24738f490ea3SStefano Zampini     PetscBool havedata = (PetscBool)!!data;
24748f490ea3SStefano Zampini 
2475273d9f13SBarry Smith     ierr = MatSetType(*A,MATMPIDENSE);CHKERRQ(ierr);
2476273d9f13SBarry Smith     ierr = MatMPIDenseSetPreallocation(*A,data);CHKERRQ(ierr);
24778f490ea3SStefano Zampini     ierr = MPIU_Allreduce(MPI_IN_PLACE,&havedata,1,MPIU_BOOL,MPI_LOR,comm);CHKERRQ(ierr);
24788f490ea3SStefano Zampini     if (havedata) {  /* user provided data array, so no need to assemble */
24796cfe35ddSJose E. Roman       ierr = MatSetUpMultiply_MPIDense(*A);CHKERRQ(ierr);
24806cfe35ddSJose E. Roman       (*A)->assembled = PETSC_TRUE;
24816cfe35ddSJose E. Roman     }
2482273d9f13SBarry Smith   } else {
2483273d9f13SBarry Smith     ierr = MatSetType(*A,MATSEQDENSE);CHKERRQ(ierr);
2484273d9f13SBarry Smith     ierr = MatSeqDenseSetPreallocation(*A,data);CHKERRQ(ierr);
24858c469469SLois Curfman McInnes   }
24863a40ed3dSBarry Smith   PetscFunctionReturn(0);
24878965ea79SLois Curfman McInnes }
24888965ea79SLois Curfman McInnes 
2489637a0070SStefano Zampini #if defined(PETSC_HAVE_CUDA)
2490637a0070SStefano Zampini /*@C
2491637a0070SStefano Zampini    MatCreateDenseCUDA - Creates a matrix in dense format using CUDA.
2492637a0070SStefano Zampini 
2493637a0070SStefano Zampini    Collective
2494637a0070SStefano Zampini 
2495637a0070SStefano Zampini    Input Parameters:
2496637a0070SStefano Zampini +  comm - MPI communicator
2497637a0070SStefano Zampini .  m - number of local rows (or PETSC_DECIDE to have calculated if M is given)
2498637a0070SStefano Zampini .  n - number of local columns (or PETSC_DECIDE to have calculated if N is given)
2499637a0070SStefano Zampini .  M - number of global rows (or PETSC_DECIDE to have calculated if m is given)
2500637a0070SStefano Zampini .  N - number of global columns (or PETSC_DECIDE to have calculated if n is given)
2501637a0070SStefano Zampini -  data - optional location of GPU matrix data.  Set data=NULL for PETSc
2502637a0070SStefano Zampini    to control matrix memory allocation.
2503637a0070SStefano Zampini 
2504637a0070SStefano Zampini    Output Parameter:
2505637a0070SStefano Zampini .  A - the matrix
2506637a0070SStefano Zampini 
2507637a0070SStefano Zampini    Notes:
2508637a0070SStefano Zampini 
2509637a0070SStefano Zampini    Level: intermediate
2510637a0070SStefano Zampini 
2511637a0070SStefano Zampini .seealso: MatCreate(), MatCreateDense()
2512637a0070SStefano Zampini @*/
2513637a0070SStefano Zampini PetscErrorCode  MatCreateDenseCUDA(MPI_Comm comm,PetscInt m,PetscInt n,PetscInt M,PetscInt N,PetscScalar *data,Mat *A)
2514637a0070SStefano Zampini {
2515637a0070SStefano Zampini   PetscErrorCode ierr;
2516637a0070SStefano Zampini   PetscMPIInt    size;
2517637a0070SStefano Zampini 
2518637a0070SStefano Zampini   PetscFunctionBegin;
2519637a0070SStefano Zampini   ierr = MatCreate(comm,A);CHKERRQ(ierr);
2520637a0070SStefano Zampini   PetscValidLogicalCollectiveBool(*A,!!data,6);
2521637a0070SStefano Zampini   ierr = MatSetSizes(*A,m,n,M,N);CHKERRQ(ierr);
2522ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2523637a0070SStefano Zampini   if (size > 1) {
2524637a0070SStefano Zampini     ierr = MatSetType(*A,MATMPIDENSECUDA);CHKERRQ(ierr);
2525637a0070SStefano Zampini     ierr = MatMPIDenseCUDASetPreallocation(*A,data);CHKERRQ(ierr);
2526637a0070SStefano Zampini     if (data) {  /* user provided data array, so no need to assemble */
2527637a0070SStefano Zampini       ierr = MatSetUpMultiply_MPIDense(*A);CHKERRQ(ierr);
2528637a0070SStefano Zampini       (*A)->assembled = PETSC_TRUE;
2529637a0070SStefano Zampini     }
2530637a0070SStefano Zampini   } else {
2531637a0070SStefano Zampini     ierr = MatSetType(*A,MATSEQDENSECUDA);CHKERRQ(ierr);
2532637a0070SStefano Zampini     ierr = MatSeqDenseCUDASetPreallocation(*A,data);CHKERRQ(ierr);
2533637a0070SStefano Zampini   }
2534637a0070SStefano Zampini   PetscFunctionReturn(0);
2535637a0070SStefano Zampini }
2536637a0070SStefano Zampini #endif
2537637a0070SStefano Zampini 
25386849ba73SBarry Smith static PetscErrorCode MatDuplicate_MPIDense(Mat A,MatDuplicateOption cpvalues,Mat *newmat)
25398965ea79SLois Curfman McInnes {
25408965ea79SLois Curfman McInnes   Mat            mat;
25413501a2bdSLois Curfman McInnes   Mat_MPIDense   *a,*oldmat = (Mat_MPIDense*)A->data;
2542dfbe8321SBarry Smith   PetscErrorCode ierr;
25438965ea79SLois Curfman McInnes 
25443a40ed3dSBarry Smith   PetscFunctionBegin;
2545f4259b30SLisandro Dalcin   *newmat = NULL;
2546ce94432eSBarry Smith   ierr    = MatCreate(PetscObjectComm((PetscObject)A),&mat);CHKERRQ(ierr);
2547d0f46423SBarry Smith   ierr    = MatSetSizes(mat,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
25487adad957SLisandro Dalcin   ierr    = MatSetType(mat,((PetscObject)A)->type_name);CHKERRQ(ierr);
2549834f8fabSBarry Smith   a       = (Mat_MPIDense*)mat->data;
25505aa7edbeSHong Zhang 
2551d5f3da31SBarry Smith   mat->factortype   = A->factortype;
2552c456f294SBarry Smith   mat->assembled    = PETSC_TRUE;
2553273d9f13SBarry Smith   mat->preallocated = PETSC_TRUE;
25548965ea79SLois Curfman McInnes 
2555e0fa3b82SLois Curfman McInnes   mat->insertmode = NOT_SET_VALUES;
25563782ba37SSatish Balay   a->donotstash   = oldmat->donotstash;
2557e04c1aa4SHong Zhang 
25581e1e43feSBarry Smith   ierr = PetscLayoutReference(A->rmap,&mat->rmap);CHKERRQ(ierr);
25591e1e43feSBarry Smith   ierr = PetscLayoutReference(A->cmap,&mat->cmap);CHKERRQ(ierr);
25608965ea79SLois Curfman McInnes 
25615609ef8eSBarry Smith   ierr = MatDuplicate(oldmat->A,cpvalues,&a->A);CHKERRQ(ierr);
25623bb1ff40SBarry Smith   ierr = PetscLogObjectParent((PetscObject)mat,(PetscObject)a->A);CHKERRQ(ierr);
2563637a0070SStefano Zampini   ierr = MatSetUpMultiply_MPIDense(mat);CHKERRQ(ierr);
256401b82886SBarry Smith 
25658965ea79SLois Curfman McInnes   *newmat = mat;
25663a40ed3dSBarry Smith   PetscFunctionReturn(0);
25678965ea79SLois Curfman McInnes }
25688965ea79SLois Curfman McInnes 
2569eb91f321SVaclav Hapla PetscErrorCode MatLoad_MPIDense(Mat newMat, PetscViewer viewer)
2570eb91f321SVaclav Hapla {
2571eb91f321SVaclav Hapla   PetscErrorCode ierr;
257287d5ce66SSatish Balay   PetscBool      isbinary;
257387d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
257487d5ce66SSatish Balay   PetscBool      ishdf5;
257587d5ce66SSatish Balay #endif
2576eb91f321SVaclav Hapla 
2577eb91f321SVaclav Hapla   PetscFunctionBegin;
2578eb91f321SVaclav Hapla   PetscValidHeaderSpecific(newMat,MAT_CLASSID,1);
2579eb91f321SVaclav Hapla   PetscValidHeaderSpecific(viewer,PETSC_VIEWER_CLASSID,2);
2580eb91f321SVaclav Hapla   /* force binary viewer to load .info file if it has not yet done so */
2581eb91f321SVaclav Hapla   ierr = PetscViewerSetUp(viewer);CHKERRQ(ierr);
2582eb91f321SVaclav Hapla   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERBINARY,&isbinary);CHKERRQ(ierr);
258387d5ce66SSatish Balay #if defined(PETSC_HAVE_HDF5)
2584eb91f321SVaclav Hapla   ierr = PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERHDF5,  &ishdf5);CHKERRQ(ierr);
258587d5ce66SSatish Balay #endif
2586eb91f321SVaclav Hapla   if (isbinary) {
25878491ab44SLisandro Dalcin     ierr = MatLoad_Dense_Binary(newMat,viewer);CHKERRQ(ierr);
2588eb91f321SVaclav Hapla #if defined(PETSC_HAVE_HDF5)
258987d5ce66SSatish Balay   } else if (ishdf5) {
2590eb91f321SVaclav Hapla     ierr = MatLoad_Dense_HDF5(newMat,viewer);CHKERRQ(ierr);
2591eb91f321SVaclav Hapla #endif
259287d5ce66SSatish Balay   } else SETERRQ2(PetscObjectComm((PetscObject)newMat),PETSC_ERR_SUP,"Viewer type %s not yet supported for reading %s matrices",((PetscObject)viewer)->type_name,((PetscObject)newMat)->type_name);
2593eb91f321SVaclav Hapla   PetscFunctionReturn(0);
2594eb91f321SVaclav Hapla }
2595eb91f321SVaclav Hapla 
25966718818eSStefano Zampini static PetscErrorCode MatEqual_MPIDense(Mat A,Mat B,PetscBool  *flag)
25976e4ee0c6SHong Zhang {
25986e4ee0c6SHong Zhang   Mat_MPIDense   *matB = (Mat_MPIDense*)B->data,*matA = (Mat_MPIDense*)A->data;
25996e4ee0c6SHong Zhang   Mat            a,b;
2600ace3abfcSBarry Smith   PetscBool      flg;
26016e4ee0c6SHong Zhang   PetscErrorCode ierr;
260290ace30eSBarry Smith 
26036e4ee0c6SHong Zhang   PetscFunctionBegin;
26046e4ee0c6SHong Zhang   a    = matA->A;
26056e4ee0c6SHong Zhang   b    = matB->A;
26066e4ee0c6SHong Zhang   ierr = MatEqual(a,b,&flg);CHKERRQ(ierr);
2607b2566f29SBarry Smith   ierr = MPIU_Allreduce(&flg,flag,1,MPIU_BOOL,MPI_LAND,PetscObjectComm((PetscObject)A));CHKERRQ(ierr);
26086e4ee0c6SHong Zhang   PetscFunctionReturn(0);
26096e4ee0c6SHong Zhang }
261090ace30eSBarry Smith 
26116718818eSStefano Zampini PetscErrorCode MatDestroy_MatTransMatMult_MPIDense_MPIDense(void *data)
2612baa3c1c6SHong Zhang {
2613baa3c1c6SHong Zhang   PetscErrorCode        ierr;
26146718818eSStefano Zampini   Mat_TransMatMultDense *atb = (Mat_TransMatMultDense *)data;
2615baa3c1c6SHong Zhang 
2616baa3c1c6SHong Zhang   PetscFunctionBegin;
2617637a0070SStefano Zampini   ierr = PetscFree2(atb->sendbuf,atb->recvcounts);CHKERRQ(ierr);
2618637a0070SStefano Zampini   ierr = MatDestroy(&atb->atb);CHKERRQ(ierr);
2619baa3c1c6SHong Zhang   ierr = PetscFree(atb);CHKERRQ(ierr);
2620baa3c1c6SHong Zhang   PetscFunctionReturn(0);
2621baa3c1c6SHong Zhang }
2622baa3c1c6SHong Zhang 
26236718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatTransMult_MPIDense_MPIDense(void *data)
2624cc48ffa7SToby Isaac {
2625cc48ffa7SToby Isaac   PetscErrorCode        ierr;
26266718818eSStefano Zampini   Mat_MatTransMultDense *abt = (Mat_MatTransMultDense *)data;
2627cc48ffa7SToby Isaac 
2628cc48ffa7SToby Isaac   PetscFunctionBegin;
2629cc48ffa7SToby Isaac   ierr = PetscFree2(abt->buf[0],abt->buf[1]);CHKERRQ(ierr);
2630faa55883SToby Isaac   ierr = PetscFree2(abt->recvcounts,abt->recvdispls);CHKERRQ(ierr);
2631cc48ffa7SToby Isaac   ierr = PetscFree(abt);CHKERRQ(ierr);
2632cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2633cc48ffa7SToby Isaac }
2634cc48ffa7SToby Isaac 
26356718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2636cb20be35SHong Zhang {
2637baa3c1c6SHong Zhang   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
26386718818eSStefano Zampini   Mat_TransMatMultDense *atb;
2639cb20be35SHong Zhang   PetscErrorCode        ierr;
2640cb20be35SHong Zhang   MPI_Comm              comm;
26416718818eSStefano Zampini   PetscMPIInt           size,*recvcounts;
26426718818eSStefano Zampini   PetscScalar           *carray,*sendbuf;
2643637a0070SStefano Zampini   const PetscScalar     *atbarray;
2644d5017740SHong Zhang   PetscInt              i,cN=C->cmap->N,cM=C->rmap->N,proc,k,j;
2645e68c0b26SHong Zhang   const PetscInt        *ranges;
2646cb20be35SHong Zhang 
2647cb20be35SHong Zhang   PetscFunctionBegin;
26486718818eSStefano Zampini   MatCheckProduct(C,3);
26496718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
26506718818eSStefano Zampini   atb = (Mat_TransMatMultDense *)C->product->data;
26516718818eSStefano Zampini   recvcounts = atb->recvcounts;
26526718818eSStefano Zampini   sendbuf = atb->sendbuf;
26536718818eSStefano Zampini 
2654cb20be35SHong Zhang   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
2655ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2656e68c0b26SHong Zhang 
2657c5ef1628SHong Zhang   /* compute atbarray = aseq^T * bseq */
2658637a0070SStefano Zampini   ierr = MatTransposeMatMult(a->A,b->A,atb->atb ? MAT_REUSE_MATRIX : MAT_INITIAL_MATRIX,PETSC_DEFAULT,&atb->atb);CHKERRQ(ierr);
2659cb20be35SHong Zhang 
2660cb20be35SHong Zhang   ierr = MatGetOwnershipRanges(C,&ranges);CHKERRQ(ierr);
2661cb20be35SHong Zhang 
2662660d5466SHong Zhang   /* arrange atbarray into sendbuf */
2663637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(atb->atb,&atbarray);CHKERRQ(ierr);
2664637a0070SStefano Zampini   for (proc=0, k=0; proc<size; proc++) {
2665baa3c1c6SHong Zhang     for (j=0; j<cN; j++) {
2666c5ef1628SHong Zhang       for (i=ranges[proc]; i<ranges[proc+1]; i++) sendbuf[k++] = atbarray[i+j*cM];
2667cb20be35SHong Zhang     }
2668cb20be35SHong Zhang   }
2669637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(atb->atb,&atbarray);CHKERRQ(ierr);
2670637a0070SStefano Zampini 
2671c5ef1628SHong Zhang   /* sum all atbarray to local values of C */
26720acaeb71SStefano Zampini   ierr = MatDenseGetArrayWrite(c->A,&carray);CHKERRQ(ierr);
2673ffc4695bSBarry Smith   ierr = MPI_Reduce_scatter(sendbuf,carray,recvcounts,MPIU_SCALAR,MPIU_SUM,comm);CHKERRMPI(ierr);
26740acaeb71SStefano Zampini   ierr = MatDenseRestoreArrayWrite(c->A,&carray);CHKERRQ(ierr);
26750acaeb71SStefano Zampini   ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
26760acaeb71SStefano Zampini   ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2677cb20be35SHong Zhang   PetscFunctionReturn(0);
2678cb20be35SHong Zhang }
2679cb20be35SHong Zhang 
26806718818eSStefano Zampini static PetscErrorCode MatTransposeMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2681cb20be35SHong Zhang {
2682cb20be35SHong Zhang   PetscErrorCode        ierr;
2683cb20be35SHong Zhang   MPI_Comm              comm;
2684baa3c1c6SHong Zhang   PetscMPIInt           size;
2685660d5466SHong Zhang   PetscInt              cm=A->cmap->n,cM,cN=B->cmap->N;
2686baa3c1c6SHong Zhang   Mat_TransMatMultDense *atb;
26876718818eSStefano Zampini   PetscBool             cisdense;
26880acaeb71SStefano Zampini   PetscInt              i;
26890acaeb71SStefano Zampini   const PetscInt        *ranges;
2690cb20be35SHong Zhang 
2691cb20be35SHong Zhang   PetscFunctionBegin;
26926718818eSStefano Zampini   MatCheckProduct(C,3);
26936718818eSStefano Zampini   if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
2694baa3c1c6SHong Zhang   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
2695cb20be35SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend) {
2696cb20be35SHong Zhang     SETERRQ4(comm,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%D, %D) != B (%D,%D)",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2697cb20be35SHong Zhang   }
2698cb20be35SHong Zhang 
26994222ddf1SHong Zhang   /* create matrix product C */
27006718818eSStefano Zampini   ierr = MatSetSizes(C,cm,B->cmap->n,A->cmap->N,B->cmap->N);CHKERRQ(ierr);
27016718818eSStefano Zampini   ierr = PetscObjectTypeCompareAny((PetscObject)C,&cisdense,MATMPIDENSE,MATMPIDENSECUDA,"");CHKERRQ(ierr);
27026718818eSStefano Zampini   if (!cisdense) {
27036718818eSStefano Zampini     ierr = MatSetType(C,((PetscObject)A)->type_name);CHKERRQ(ierr);
27046718818eSStefano Zampini   }
270518992e5dSStefano Zampini   ierr = MatSetUp(C);CHKERRQ(ierr);
2706baa3c1c6SHong Zhang 
27074222ddf1SHong Zhang   /* create data structure for reuse C */
2708ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2709baa3c1c6SHong Zhang   ierr = PetscNew(&atb);CHKERRQ(ierr);
27104222ddf1SHong Zhang   cM   = C->rmap->N;
27116718818eSStefano Zampini   ierr = PetscMalloc2((size_t)cM*(size_t)cN,&atb->sendbuf,size,&atb->recvcounts);CHKERRQ(ierr);
27120acaeb71SStefano Zampini   ierr = MatGetOwnershipRanges(C,&ranges);CHKERRQ(ierr);
27130acaeb71SStefano Zampini   for (i=0; i<size; i++) atb->recvcounts[i] = (ranges[i+1] - ranges[i])*cN;
2714baa3c1c6SHong Zhang 
27156718818eSStefano Zampini   C->product->data    = atb;
27166718818eSStefano Zampini   C->product->destroy = MatDestroy_MatTransMatMult_MPIDense_MPIDense;
2717cb20be35SHong Zhang   PetscFunctionReturn(0);
2718cb20be35SHong Zhang }
2719cb20be35SHong Zhang 
27204222ddf1SHong Zhang static PetscErrorCode MatMatTransposeMultSymbolic_MPIDense_MPIDense(Mat A, Mat B, PetscReal fill, Mat C)
2721cb20be35SHong Zhang {
2722cb20be35SHong Zhang   PetscErrorCode        ierr;
2723cc48ffa7SToby Isaac   MPI_Comm              comm;
2724cc48ffa7SToby Isaac   PetscMPIInt           i, size;
2725cc48ffa7SToby Isaac   PetscInt              maxRows, bufsiz;
2726cc48ffa7SToby Isaac   PetscMPIInt           tag;
27274222ddf1SHong Zhang   PetscInt              alg;
2728cc48ffa7SToby Isaac   Mat_MatTransMultDense *abt;
27294222ddf1SHong Zhang   Mat_Product           *product = C->product;
27304222ddf1SHong Zhang   PetscBool             flg;
2731cc48ffa7SToby Isaac 
2732cc48ffa7SToby Isaac   PetscFunctionBegin;
27336718818eSStefano Zampini   MatCheckProduct(C,4);
27346718818eSStefano Zampini   if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
27354222ddf1SHong Zhang   /* check local size of A and B */
2736637a0070SStefano Zampini   if (A->cmap->n != B->cmap->n) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local column dimensions are incompatible, A (%D) != B (%D)",A->cmap->n,B->cmap->n);
2737cc48ffa7SToby Isaac 
27384222ddf1SHong Zhang   ierr = PetscStrcmp(product->alg,"allgatherv",&flg);CHKERRQ(ierr);
2739637a0070SStefano Zampini   alg  = flg ? 0 : 1;
2740cc48ffa7SToby Isaac 
27414222ddf1SHong Zhang   /* setup matrix product C */
27424222ddf1SHong Zhang   ierr = MatSetSizes(C,A->rmap->n,B->rmap->n,A->rmap->N,B->rmap->N);CHKERRQ(ierr);
27434222ddf1SHong Zhang   ierr = MatSetType(C,MATMPIDENSE);CHKERRQ(ierr);
274418992e5dSStefano Zampini   ierr = MatSetUp(C);CHKERRQ(ierr);
27454222ddf1SHong Zhang   ierr = PetscObjectGetNewTag((PetscObject)C,&tag);CHKERRQ(ierr);
27464222ddf1SHong Zhang 
27474222ddf1SHong Zhang   /* create data structure for reuse C */
27484222ddf1SHong Zhang   ierr = PetscObjectGetComm((PetscObject)C,&comm);CHKERRQ(ierr);
2749ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2750cc48ffa7SToby Isaac   ierr = PetscNew(&abt);CHKERRQ(ierr);
2751cc48ffa7SToby Isaac   abt->tag = tag;
2752faa55883SToby Isaac   abt->alg = alg;
2753faa55883SToby Isaac   switch (alg) {
27544222ddf1SHong Zhang   case 1: /* alg: "cyclic" */
2755cc48ffa7SToby Isaac     for (maxRows = 0, i = 0; i < size; i++) maxRows = PetscMax(maxRows, (B->rmap->range[i + 1] - B->rmap->range[i]));
2756cc48ffa7SToby Isaac     bufsiz = A->cmap->N * maxRows;
2757cc48ffa7SToby Isaac     ierr = PetscMalloc2(bufsiz,&(abt->buf[0]),bufsiz,&(abt->buf[1]));CHKERRQ(ierr);
2758faa55883SToby Isaac     break;
27594222ddf1SHong Zhang   default: /* alg: "allgatherv" */
2760faa55883SToby Isaac     ierr = PetscMalloc2(B->rmap->n * B->cmap->N, &(abt->buf[0]), B->rmap->N * B->cmap->N, &(abt->buf[1]));CHKERRQ(ierr);
2761faa55883SToby Isaac     ierr = PetscMalloc2(size,&(abt->recvcounts),size+1,&(abt->recvdispls));CHKERRQ(ierr);
2762faa55883SToby Isaac     for (i = 0; i <= size; i++) abt->recvdispls[i] = B->rmap->range[i] * A->cmap->N;
2763faa55883SToby Isaac     for (i = 0; i < size; i++) abt->recvcounts[i] = abt->recvdispls[i + 1] - abt->recvdispls[i];
2764faa55883SToby Isaac     break;
2765faa55883SToby Isaac   }
2766cc48ffa7SToby Isaac 
27676718818eSStefano Zampini   C->product->data    = abt;
27686718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatTransMult_MPIDense_MPIDense;
27694222ddf1SHong Zhang   C->ops->mattransposemultnumeric = MatMatTransposeMultNumeric_MPIDense_MPIDense;
2770cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2771cc48ffa7SToby Isaac }
2772cc48ffa7SToby Isaac 
2773faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(Mat A, Mat B, Mat C)
2774cc48ffa7SToby Isaac {
2775cc48ffa7SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
27766718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2777cc48ffa7SToby Isaac   PetscErrorCode        ierr;
2778cc48ffa7SToby Isaac   MPI_Comm              comm;
2779cc48ffa7SToby Isaac   PetscMPIInt           rank,size, sendsiz, recvsiz, sendto, recvfrom, recvisfrom;
2780f4259b30SLisandro Dalcin   PetscScalar           *sendbuf, *recvbuf=NULL, *cv;
2781cc48ffa7SToby Isaac   PetscInt              i,cK=A->cmap->N,k,j,bn;
2782cc48ffa7SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2783637a0070SStefano Zampini   const PetscScalar     *av,*bv;
278423fff9afSBarry Smith   PetscBLASInt          cm, cn, ck, alda, blda = 0, clda;
2785cc48ffa7SToby Isaac   MPI_Request           reqs[2];
2786cc48ffa7SToby Isaac   const PetscInt        *ranges;
2787cc48ffa7SToby Isaac 
2788cc48ffa7SToby Isaac   PetscFunctionBegin;
27896718818eSStefano Zampini   MatCheckProduct(C,3);
27906718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
27916718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
27926718818eSStefano Zampini   ierr = PetscObjectGetComm((PetscObject)C,&comm);CHKERRQ(ierr);
2793ffc4695bSBarry Smith   ierr = MPI_Comm_rank(comm,&rank);CHKERRMPI(ierr);
2794ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2795637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(a->A,&av);CHKERRQ(ierr);
2796637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(b->A,&bv);CHKERRQ(ierr);
27970acaeb71SStefano Zampini   ierr = MatDenseGetArrayWrite(c->A,&cv);CHKERRQ(ierr);
2798637a0070SStefano Zampini   ierr = MatDenseGetLDA(a->A,&i);CHKERRQ(ierr);
2799637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&alda);CHKERRQ(ierr);
2800637a0070SStefano Zampini   ierr = MatDenseGetLDA(b->A,&i);CHKERRQ(ierr);
2801637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&blda);CHKERRQ(ierr);
2802637a0070SStefano Zampini   ierr = MatDenseGetLDA(c->A,&i);CHKERRQ(ierr);
2803637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&clda);CHKERRQ(ierr);
2804cc48ffa7SToby Isaac   ierr = MatGetOwnershipRanges(B,&ranges);CHKERRQ(ierr);
2805cc48ffa7SToby Isaac   bn   = B->rmap->n;
2806637a0070SStefano Zampini   if (blda == bn) {
2807637a0070SStefano Zampini     sendbuf = (PetscScalar*)bv;
2808cc48ffa7SToby Isaac   } else {
2809cc48ffa7SToby Isaac     sendbuf = abt->buf[0];
2810cc48ffa7SToby Isaac     for (k = 0, i = 0; i < cK; i++) {
2811cc48ffa7SToby Isaac       for (j = 0; j < bn; j++, k++) {
2812637a0070SStefano Zampini         sendbuf[k] = bv[i * blda + j];
2813cc48ffa7SToby Isaac       }
2814cc48ffa7SToby Isaac     }
2815cc48ffa7SToby Isaac   }
2816cc48ffa7SToby Isaac   if (size > 1) {
2817cc48ffa7SToby Isaac     sendto = (rank + size - 1) % size;
2818cc48ffa7SToby Isaac     recvfrom = (rank + size + 1) % size;
2819cc48ffa7SToby Isaac   } else {
2820cc48ffa7SToby Isaac     sendto = recvfrom = 0;
2821cc48ffa7SToby Isaac   }
2822cc48ffa7SToby Isaac   ierr = PetscBLASIntCast(cK,&ck);CHKERRQ(ierr);
2823cc48ffa7SToby Isaac   ierr = PetscBLASIntCast(c->A->rmap->n,&cm);CHKERRQ(ierr);
2824cc48ffa7SToby Isaac   recvisfrom = rank;
2825cc48ffa7SToby Isaac   for (i = 0; i < size; i++) {
2826cc48ffa7SToby Isaac     /* we have finished receiving in sending, bufs can be read/modified */
2827cc48ffa7SToby Isaac     PetscInt nextrecvisfrom = (recvisfrom + 1) % size; /* which process the next recvbuf will originate on */
2828cc48ffa7SToby Isaac     PetscInt nextbn = ranges[nextrecvisfrom + 1] - ranges[nextrecvisfrom];
2829cc48ffa7SToby Isaac 
2830cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2831cc48ffa7SToby Isaac       /* start the cyclic sends from sendbuf, to recvbuf (which will switch to sendbuf) */
2832cc48ffa7SToby Isaac       sendsiz = cK * bn;
2833cc48ffa7SToby Isaac       recvsiz = cK * nextbn;
2834cc48ffa7SToby Isaac       recvbuf = (i & 1) ? abt->buf[0] : abt->buf[1];
2835ffc4695bSBarry Smith       ierr = MPI_Isend(sendbuf, sendsiz, MPIU_SCALAR, sendto, abt->tag, comm, &reqs[0]);CHKERRMPI(ierr);
2836ffc4695bSBarry Smith       ierr = MPI_Irecv(recvbuf, recvsiz, MPIU_SCALAR, recvfrom, abt->tag, comm, &reqs[1]);CHKERRMPI(ierr);
2837cc48ffa7SToby Isaac     }
2838cc48ffa7SToby Isaac 
2839cc48ffa7SToby Isaac     /* local aseq * sendbuf^T */
2840cc48ffa7SToby Isaac     ierr = PetscBLASIntCast(ranges[recvisfrom + 1] - ranges[recvisfrom], &cn);CHKERRQ(ierr);
284150ce3c9cSStefano Zampini     if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","T",&cm,&cn,&ck,&_DOne,av,&alda,sendbuf,&cn,&_DZero,cv + clda * ranges[recvisfrom],&clda));
2842cc48ffa7SToby Isaac 
2843cc48ffa7SToby Isaac     if (nextrecvisfrom != rank) {
2844cc48ffa7SToby Isaac       /* wait for the sends and receives to complete, swap sendbuf and recvbuf */
2845ffc4695bSBarry Smith       ierr = MPI_Waitall(2, reqs, MPI_STATUSES_IGNORE);CHKERRMPI(ierr);
2846cc48ffa7SToby Isaac     }
2847cc48ffa7SToby Isaac     bn = nextbn;
2848cc48ffa7SToby Isaac     recvisfrom = nextrecvisfrom;
2849cc48ffa7SToby Isaac     sendbuf = recvbuf;
2850cc48ffa7SToby Isaac   }
2851637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,&av);CHKERRQ(ierr);
2852637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(b->A,&bv);CHKERRQ(ierr);
28530acaeb71SStefano Zampini   ierr = MatDenseRestoreArrayWrite(c->A,&cv);CHKERRQ(ierr);
28540acaeb71SStefano Zampini   ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
28550acaeb71SStefano Zampini   ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2856cc48ffa7SToby Isaac   PetscFunctionReturn(0);
2857cc48ffa7SToby Isaac }
2858cc48ffa7SToby Isaac 
2859faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(Mat A, Mat B, Mat C)
2860faa55883SToby Isaac {
2861faa55883SToby Isaac   Mat_MPIDense          *a=(Mat_MPIDense*)A->data, *b=(Mat_MPIDense*)B->data, *c=(Mat_MPIDense*)C->data;
28626718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2863faa55883SToby Isaac   PetscErrorCode        ierr;
2864faa55883SToby Isaac   MPI_Comm              comm;
2865637a0070SStefano Zampini   PetscMPIInt           size;
2866637a0070SStefano Zampini   PetscScalar           *cv, *sendbuf, *recvbuf;
2867637a0070SStefano Zampini   const PetscScalar     *av,*bv;
2868637a0070SStefano Zampini   PetscInt              blda,i,cK=A->cmap->N,k,j,bn;
2869faa55883SToby Isaac   PetscScalar           _DOne=1.0,_DZero=0.0;
2870637a0070SStefano Zampini   PetscBLASInt          cm, cn, ck, alda, clda;
2871faa55883SToby Isaac 
2872faa55883SToby Isaac   PetscFunctionBegin;
28736718818eSStefano Zampini   MatCheckProduct(C,3);
28746718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
28756718818eSStefano Zampini   abt  = (Mat_MatTransMultDense*)C->product->data;
2876faa55883SToby Isaac   ierr = PetscObjectGetComm((PetscObject)A,&comm);CHKERRQ(ierr);
2877ffc4695bSBarry Smith   ierr = MPI_Comm_size(comm,&size);CHKERRMPI(ierr);
2878637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(a->A,&av);CHKERRQ(ierr);
2879637a0070SStefano Zampini   ierr = MatDenseGetArrayRead(b->A,&bv);CHKERRQ(ierr);
28800acaeb71SStefano Zampini   ierr = MatDenseGetArrayWrite(c->A,&cv);CHKERRQ(ierr);
2881637a0070SStefano Zampini   ierr = MatDenseGetLDA(a->A,&i);CHKERRQ(ierr);
2882637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&alda);CHKERRQ(ierr);
2883637a0070SStefano Zampini   ierr = MatDenseGetLDA(b->A,&blda);CHKERRQ(ierr);
2884637a0070SStefano Zampini   ierr = MatDenseGetLDA(c->A,&i);CHKERRQ(ierr);
2885637a0070SStefano Zampini   ierr = PetscBLASIntCast(i,&clda);CHKERRQ(ierr);
2886faa55883SToby Isaac   /* copy transpose of B into buf[0] */
2887faa55883SToby Isaac   bn      = B->rmap->n;
2888faa55883SToby Isaac   sendbuf = abt->buf[0];
2889faa55883SToby Isaac   recvbuf = abt->buf[1];
2890faa55883SToby Isaac   for (k = 0, j = 0; j < bn; j++) {
2891faa55883SToby Isaac     for (i = 0; i < cK; i++, k++) {
2892637a0070SStefano Zampini       sendbuf[k] = bv[i * blda + j];
2893faa55883SToby Isaac     }
2894faa55883SToby Isaac   }
2895637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(b->A,&bv);CHKERRQ(ierr);
2896ffc4695bSBarry Smith   ierr = MPI_Allgatherv(sendbuf, bn * cK, MPIU_SCALAR, recvbuf, abt->recvcounts, abt->recvdispls, MPIU_SCALAR, comm);CHKERRMPI(ierr);
2897faa55883SToby Isaac   ierr = PetscBLASIntCast(cK,&ck);CHKERRQ(ierr);
2898faa55883SToby Isaac   ierr = PetscBLASIntCast(c->A->rmap->n,&cm);CHKERRQ(ierr);
2899faa55883SToby Isaac   ierr = PetscBLASIntCast(c->A->cmap->n,&cn);CHKERRQ(ierr);
290050ce3c9cSStefano Zampini   if (cm && cn && ck) PetscStackCallBLAS("BLASgemm",BLASgemm_("N","N",&cm,&cn,&ck,&_DOne,av,&alda,recvbuf,&ck,&_DZero,cv,&clda));
2901637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(a->A,&av);CHKERRQ(ierr);
2902637a0070SStefano Zampini   ierr = MatDenseRestoreArrayRead(b->A,&bv);CHKERRQ(ierr);
29030acaeb71SStefano Zampini   ierr = MatDenseRestoreArrayWrite(c->A,&cv);CHKERRQ(ierr);
29040acaeb71SStefano Zampini   ierr = MatAssemblyBegin(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
29050acaeb71SStefano Zampini   ierr = MatAssemblyEnd(C,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
2906faa55883SToby Isaac   PetscFunctionReturn(0);
2907faa55883SToby Isaac }
2908faa55883SToby Isaac 
2909faa55883SToby Isaac static PetscErrorCode MatMatTransposeMultNumeric_MPIDense_MPIDense(Mat A, Mat B, Mat C)
2910faa55883SToby Isaac {
29116718818eSStefano Zampini   Mat_MatTransMultDense *abt;
2912faa55883SToby Isaac   PetscErrorCode        ierr;
2913faa55883SToby Isaac 
2914faa55883SToby Isaac   PetscFunctionBegin;
29156718818eSStefano Zampini   MatCheckProduct(C,3);
29166718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data empty");
29176718818eSStefano Zampini   abt = (Mat_MatTransMultDense*)C->product->data;
2918faa55883SToby Isaac   switch (abt->alg) {
2919faa55883SToby Isaac   case 1:
2920faa55883SToby Isaac     ierr = MatMatTransposeMultNumeric_MPIDense_MPIDense_Cyclic(A, B, C);CHKERRQ(ierr);
2921faa55883SToby Isaac     break;
2922faa55883SToby Isaac   default:
2923faa55883SToby Isaac     ierr = MatMatTransposeMultNumeric_MPIDense_MPIDense_Allgatherv(A, B, C);CHKERRQ(ierr);
2924faa55883SToby Isaac     break;
2925faa55883SToby Isaac   }
2926faa55883SToby Isaac   PetscFunctionReturn(0);
2927faa55883SToby Isaac }
2928faa55883SToby Isaac 
29296718818eSStefano Zampini PetscErrorCode MatDestroy_MatMatMult_MPIDense_MPIDense(void *data)
2930320f2790SHong Zhang {
2931320f2790SHong Zhang   PetscErrorCode   ierr;
29326718818eSStefano Zampini   Mat_MatMultDense *ab = (Mat_MatMultDense*)data;
2933320f2790SHong Zhang 
2934320f2790SHong Zhang   PetscFunctionBegin;
2935320f2790SHong Zhang   ierr = MatDestroy(&ab->Ce);CHKERRQ(ierr);
2936320f2790SHong Zhang   ierr = MatDestroy(&ab->Ae);CHKERRQ(ierr);
2937320f2790SHong Zhang   ierr = MatDestroy(&ab->Be);CHKERRQ(ierr);
2938320f2790SHong Zhang   ierr = PetscFree(ab);CHKERRQ(ierr);
2939320f2790SHong Zhang   PetscFunctionReturn(0);
2940320f2790SHong Zhang }
2941320f2790SHong Zhang 
29425242a7b1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
2943320f2790SHong Zhang PetscErrorCode MatMatMultNumeric_MPIDense_MPIDense(Mat A,Mat B,Mat C)
2944320f2790SHong Zhang {
2945320f2790SHong Zhang   PetscErrorCode   ierr;
29466718818eSStefano Zampini   Mat_MatMultDense *ab;
2947320f2790SHong Zhang 
2948320f2790SHong Zhang   PetscFunctionBegin;
29496718818eSStefano Zampini   MatCheckProduct(C,3);
29506718818eSStefano Zampini   if (!C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Missing product data");
29516718818eSStefano Zampini   ab   = (Mat_MatMultDense*)C->product->data;
2952de0a22f0SHong Zhang   ierr = MatConvert_MPIDense_Elemental(A,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Ae);CHKERRQ(ierr);
2953de0a22f0SHong Zhang   ierr = MatConvert_MPIDense_Elemental(B,MATELEMENTAL,MAT_REUSE_MATRIX, &ab->Be);CHKERRQ(ierr);
29544222ddf1SHong Zhang   ierr = MatMatMultNumeric_Elemental(ab->Ae,ab->Be,ab->Ce);CHKERRQ(ierr);
2955de0a22f0SHong Zhang   ierr = MatConvert(ab->Ce,MATMPIDENSE,MAT_REUSE_MATRIX,&C);CHKERRQ(ierr);
2956320f2790SHong Zhang   PetscFunctionReturn(0);
2957320f2790SHong Zhang }
2958320f2790SHong Zhang 
29596718818eSStefano Zampini static PetscErrorCode MatMatMultSymbolic_MPIDense_MPIDense(Mat A,Mat B,PetscReal fill,Mat C)
2960320f2790SHong Zhang {
2961320f2790SHong Zhang   PetscErrorCode   ierr;
2962320f2790SHong Zhang   Mat              Ae,Be,Ce;
2963320f2790SHong Zhang   Mat_MatMultDense *ab;
2964320f2790SHong Zhang 
2965320f2790SHong Zhang   PetscFunctionBegin;
29666718818eSStefano Zampini   MatCheckProduct(C,4);
29676718818eSStefano Zampini   if (C->product->data) SETERRQ(PetscObjectComm((PetscObject)C),PETSC_ERR_PLIB,"Product data not empty");
29684222ddf1SHong Zhang   /* check local size of A and B */
2969320f2790SHong Zhang   if (A->cmap->rstart != B->rmap->rstart || A->cmap->rend != B->rmap->rend) {
2970378336b6SHong Zhang     SETERRQ4(PetscObjectComm((PetscObject)A),PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, A (%D, %D) != B (%D,%D)",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
2971320f2790SHong Zhang   }
2972320f2790SHong Zhang 
29734222ddf1SHong Zhang   /* create elemental matrices Ae and Be */
29744222ddf1SHong Zhang   ierr = MatCreate(PetscObjectComm((PetscObject)A), &Ae);CHKERRQ(ierr);
29754222ddf1SHong Zhang   ierr = MatSetSizes(Ae,PETSC_DECIDE,PETSC_DECIDE,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
29764222ddf1SHong Zhang   ierr = MatSetType(Ae,MATELEMENTAL);CHKERRQ(ierr);
29774222ddf1SHong Zhang   ierr = MatSetUp(Ae);CHKERRQ(ierr);
29784222ddf1SHong Zhang   ierr = MatSetOption(Ae,MAT_ROW_ORIENTED,PETSC_FALSE);CHKERRQ(ierr);
2979320f2790SHong Zhang 
29804222ddf1SHong Zhang   ierr = MatCreate(PetscObjectComm((PetscObject)B), &Be);CHKERRQ(ierr);
29814222ddf1SHong Zhang   ierr = MatSetSizes(Be,PETSC_DECIDE,PETSC_DECIDE,B->rmap->N,B->cmap->N);CHKERRQ(ierr);
29824222ddf1SHong Zhang   ierr = MatSetType(Be,MATELEMENTAL);CHKERRQ(ierr);
29834222ddf1SHong Zhang   ierr = MatSetUp(Be);CHKERRQ(ierr);
29844222ddf1SHong Zhang   ierr = MatSetOption(Be,MAT_ROW_ORIENTED,PETSC_FALSE);CHKERRQ(ierr);
2985320f2790SHong Zhang 
29864222ddf1SHong Zhang   /* compute symbolic Ce = Ae*Be */
29874222ddf1SHong Zhang   ierr = MatCreate(PetscObjectComm((PetscObject)C),&Ce);CHKERRQ(ierr);
29884222ddf1SHong Zhang   ierr = MatMatMultSymbolic_Elemental(Ae,Be,fill,Ce);CHKERRQ(ierr);
29894222ddf1SHong Zhang 
29904222ddf1SHong Zhang   /* setup C */
29914222ddf1SHong Zhang   ierr = MatSetSizes(C,A->rmap->n,B->cmap->n,PETSC_DECIDE,PETSC_DECIDE);CHKERRQ(ierr);
29924222ddf1SHong Zhang   ierr = MatSetType(C,MATDENSE);CHKERRQ(ierr);
29934222ddf1SHong Zhang   ierr = MatSetUp(C);CHKERRQ(ierr);
2994320f2790SHong Zhang 
2995320f2790SHong Zhang   /* create data structure for reuse Cdense */
2996320f2790SHong Zhang   ierr = PetscNew(&ab);CHKERRQ(ierr);
2997320f2790SHong Zhang   ab->Ae = Ae;
2998320f2790SHong Zhang   ab->Be = Be;
2999320f2790SHong Zhang   ab->Ce = Ce;
30006718818eSStefano Zampini 
30016718818eSStefano Zampini   C->product->data    = ab;
30026718818eSStefano Zampini   C->product->destroy = MatDestroy_MatMatMult_MPIDense_MPIDense;
30034222ddf1SHong Zhang   C->ops->matmultnumeric = MatMatMultNumeric_MPIDense_MPIDense;
3004320f2790SHong Zhang   PetscFunctionReturn(0);
3005320f2790SHong Zhang }
30064222ddf1SHong Zhang #endif
30074222ddf1SHong Zhang /* ----------------------------------------------- */
30084222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
30094222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AB(Mat C)
3010320f2790SHong Zhang {
3011320f2790SHong Zhang   PetscFunctionBegin;
30124222ddf1SHong Zhang   C->ops->matmultsymbolic = MatMatMultSymbolic_MPIDense_MPIDense;
30134222ddf1SHong Zhang   C->ops->productsymbolic = MatProductSymbolic_AB;
3014320f2790SHong Zhang   PetscFunctionReturn(0);
3015320f2790SHong Zhang }
30165242a7b1SHong Zhang #endif
301786aefd0dSHong Zhang 
30184222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_AtB(Mat C)
30194222ddf1SHong Zhang {
30204222ddf1SHong Zhang   Mat_Product *product = C->product;
30214222ddf1SHong Zhang   Mat         A = product->A,B=product->B;
30224222ddf1SHong Zhang 
30234222ddf1SHong Zhang   PetscFunctionBegin;
30244222ddf1SHong Zhang   if (A->rmap->rstart != B->rmap->rstart || A->rmap->rend != B->rmap->rend)
30254222ddf1SHong Zhang     SETERRQ4(PETSC_COMM_SELF,PETSC_ERR_ARG_SIZ,"Matrix local dimensions are incompatible, (%D, %D) != (%D,%D)",A->rmap->rstart,A->rmap->rend,B->rmap->rstart,B->rmap->rend);
30266718818eSStefano Zampini   C->ops->transposematmultsymbolic = MatTransposeMatMultSymbolic_MPIDense_MPIDense;
30276718818eSStefano Zampini   C->ops->productsymbolic = MatProductSymbolic_AtB;
30284222ddf1SHong Zhang   PetscFunctionReturn(0);
30294222ddf1SHong Zhang }
30304222ddf1SHong Zhang 
30314222ddf1SHong Zhang static PetscErrorCode MatProductSetFromOptions_MPIDense_ABt(Mat C)
30324222ddf1SHong Zhang {
30334222ddf1SHong Zhang   PetscErrorCode ierr;
30344222ddf1SHong Zhang   Mat_Product    *product = C->product;
30354222ddf1SHong Zhang   const char     *algTypes[2] = {"allgatherv","cyclic"};
30364222ddf1SHong Zhang   PetscInt       alg,nalg = 2;
30374222ddf1SHong Zhang   PetscBool      flg = PETSC_FALSE;
30384222ddf1SHong Zhang 
30394222ddf1SHong Zhang   PetscFunctionBegin;
30404222ddf1SHong Zhang   /* Set default algorithm */
30414222ddf1SHong Zhang   alg = 0; /* default is allgatherv */
30424222ddf1SHong Zhang   ierr = PetscStrcmp(product->alg,"default",&flg);CHKERRQ(ierr);
30434222ddf1SHong Zhang   if (flg) {
30444222ddf1SHong Zhang     ierr = MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]);CHKERRQ(ierr);
30454222ddf1SHong Zhang   }
30464222ddf1SHong Zhang 
30474222ddf1SHong Zhang   /* Get runtime option */
30484222ddf1SHong Zhang   if (product->api_user) {
30494222ddf1SHong Zhang     ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatMatTransposeMult","Mat");CHKERRQ(ierr);
30504222ddf1SHong Zhang     ierr = PetscOptionsEList("-matmattransmult_mpidense_mpidense_via","Algorithmic approach","MatMatTransposeMult",algTypes,nalg,algTypes[alg],&alg,&flg);CHKERRQ(ierr);
30514222ddf1SHong Zhang     ierr = PetscOptionsEnd();CHKERRQ(ierr);
30524222ddf1SHong Zhang   } else {
30534222ddf1SHong Zhang     ierr = PetscOptionsBegin(PetscObjectComm((PetscObject)C),((PetscObject)C)->prefix,"MatProduct_ABt","Mat");CHKERRQ(ierr);
30544222ddf1SHong Zhang     ierr = PetscOptionsEList("-matproduct_abt_mpidense_mpidense_via","Algorithmic approach","MatProduct_ABt",algTypes,nalg,algTypes[alg],&alg,&flg);CHKERRQ(ierr);
30554222ddf1SHong Zhang     ierr = PetscOptionsEnd();CHKERRQ(ierr);
30564222ddf1SHong Zhang   }
30574222ddf1SHong Zhang   if (flg) {
30584222ddf1SHong Zhang     ierr = MatProductSetAlgorithm(C,(MatProductAlgorithm)algTypes[alg]);CHKERRQ(ierr);
30594222ddf1SHong Zhang   }
30604222ddf1SHong Zhang 
30614222ddf1SHong Zhang   C->ops->mattransposemultsymbolic = MatMatTransposeMultSymbolic_MPIDense_MPIDense;
30624222ddf1SHong Zhang   C->ops->productsymbolic          = MatProductSymbolic_ABt;
30634222ddf1SHong Zhang   PetscFunctionReturn(0);
30644222ddf1SHong Zhang }
30654222ddf1SHong Zhang 
30664222ddf1SHong Zhang PETSC_INTERN PetscErrorCode MatProductSetFromOptions_MPIDense(Mat C)
30674222ddf1SHong Zhang {
30684222ddf1SHong Zhang   PetscErrorCode ierr;
30694222ddf1SHong Zhang   Mat_Product    *product = C->product;
30704222ddf1SHong Zhang 
30714222ddf1SHong Zhang   PetscFunctionBegin;
30724222ddf1SHong Zhang   switch (product->type) {
30734222ddf1SHong Zhang #if defined(PETSC_HAVE_ELEMENTAL)
30744222ddf1SHong Zhang   case MATPRODUCT_AB:
30754222ddf1SHong Zhang     ierr = MatProductSetFromOptions_MPIDense_AB(C);CHKERRQ(ierr);
30764222ddf1SHong Zhang     break;
30774222ddf1SHong Zhang #endif
30784222ddf1SHong Zhang   case MATPRODUCT_AtB:
30794222ddf1SHong Zhang     ierr = MatProductSetFromOptions_MPIDense_AtB(C);CHKERRQ(ierr);
30804222ddf1SHong Zhang     break;
30814222ddf1SHong Zhang   case MATPRODUCT_ABt:
30824222ddf1SHong Zhang     ierr = MatProductSetFromOptions_MPIDense_ABt(C);CHKERRQ(ierr);
30834222ddf1SHong Zhang     break;
30846718818eSStefano Zampini   default:
30856718818eSStefano Zampini     break;
30864222ddf1SHong Zhang   }
30874222ddf1SHong Zhang   PetscFunctionReturn(0);
30884222ddf1SHong Zhang }
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