1f17f7ee2SSatish Balay #include <h2opusconf.h> 2f17f7ee2SSatish Balay /* skip compilation of this .cu file if H2OPUS is CPU only while PETSc has GPU support */ 3f17f7ee2SSatish Balay #if !defined(__CUDACC__) || defined(H2OPUS_USE_GPU) 4f17f7ee2SSatish Balay #include <h2opus.h> 5f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 6f17f7ee2SSatish Balay #include <h2opus/distributed/distributed_h2opus_handle.h> 7f17f7ee2SSatish Balay #include <h2opus/distributed/distributed_geometric_construction.h> 8f17f7ee2SSatish Balay #include <h2opus/distributed/distributed_hgemv.h> 9f17f7ee2SSatish Balay #include <h2opus/distributed/distributed_horthog.h> 10f17f7ee2SSatish Balay #include <h2opus/distributed/distributed_hcompress.h> 11f17f7ee2SSatish Balay #endif 12f17f7ee2SSatish Balay #include <h2opus/util/boxentrygen.h> 13f17f7ee2SSatish Balay #include <petsc/private/matimpl.h> 14f17f7ee2SSatish Balay #include <petsc/private/vecimpl.h> 15f17f7ee2SSatish Balay #include <petsc/private/deviceimpl.h> 16f17f7ee2SSatish Balay #include <petscsf.h> 17f17f7ee2SSatish Balay 18f17f7ee2SSatish Balay /* math2opusutils */ 19f17f7ee2SSatish Balay PETSC_INTERN PetscErrorCode PetscSFGetVectorSF(PetscSF, PetscInt, PetscInt, PetscInt, PetscSF *); 20f17f7ee2SSatish Balay PETSC_INTERN PetscErrorCode MatDenseGetH2OpusVectorSF(Mat, PetscSF, PetscSF *); 21f17f7ee2SSatish Balay PETSC_INTERN PetscErrorCode VecSign(Vec, Vec); 22f17f7ee2SSatish Balay PETSC_INTERN PetscErrorCode VecSetDelta(Vec, PetscInt); 23f17f7ee2SSatish Balay PETSC_INTERN PetscErrorCode MatApproximateNorm_Private(Mat, NormType, PetscInt, PetscReal *); 24f17f7ee2SSatish Balay 25f17f7ee2SSatish Balay #define MatH2OpusGetThrustPointer(v) thrust::raw_pointer_cast((v).data()) 26f17f7ee2SSatish Balay 27f17f7ee2SSatish Balay /* Use GPU only if H2OPUS is configured for GPU */ 28f17f7ee2SSatish Balay #if defined(PETSC_HAVE_CUDA) && defined(H2OPUS_USE_GPU) 29f17f7ee2SSatish Balay #define PETSC_H2OPUS_USE_GPU 30f17f7ee2SSatish Balay #endif 31f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 32f17f7ee2SSatish Balay #define MatH2OpusUpdateIfNeeded(A, B) MatBindToCPU(A, (PetscBool)((A)->boundtocpu || (B))) 33f17f7ee2SSatish Balay #else 34f17f7ee2SSatish Balay #define MatH2OpusUpdateIfNeeded(A, B) 0 35f17f7ee2SSatish Balay #endif 36f17f7ee2SSatish Balay 37f17f7ee2SSatish Balay // TODO H2OPUS: 38f17f7ee2SSatish Balay // DistributedHMatrix 39f17f7ee2SSatish Balay // unsymmetric ? 40f17f7ee2SSatish Balay // transpose for distributed_hgemv? 41f17f7ee2SSatish Balay // clearData() 42f17f7ee2SSatish Balay // Unify interface for sequential and parallel? 43f17f7ee2SSatish Balay // Reuse geometric construction (almost possible, only the unsymmetric case is explicitly handled) 44f17f7ee2SSatish Balay // 459371c9d4SSatish Balay template <class T> 469371c9d4SSatish Balay class PetscPointCloud : public H2OpusDataSet<T> { 47f17f7ee2SSatish Balay private: 48f17f7ee2SSatish Balay int dimension; 49f17f7ee2SSatish Balay size_t num_points; 50f17f7ee2SSatish Balay std::vector<T> pts; 51f17f7ee2SSatish Balay 52f17f7ee2SSatish Balay public: 539371c9d4SSatish Balay PetscPointCloud(int dim, size_t num_pts, const T coords[]) { 54f17f7ee2SSatish Balay dim = dim > 0 ? dim : 1; 55f17f7ee2SSatish Balay this->dimension = dim; 56f17f7ee2SSatish Balay this->num_points = num_pts; 57f17f7ee2SSatish Balay 58f17f7ee2SSatish Balay pts.resize(num_pts * dim); 59f17f7ee2SSatish Balay if (coords) { 60036e4bdcSSatish Balay for (size_t n = 0; n < num_pts; n++) 619371c9d4SSatish Balay for (int i = 0; i < dim; i++) pts[n * dim + i] = coords[n * dim + i]; 62f17f7ee2SSatish Balay } else { 63036e4bdcSSatish Balay PetscReal h = 1.0; //num_pts > 1 ? 1./(num_pts - 1) : 0.0; 64036e4bdcSSatish Balay for (size_t n = 0; n < num_pts; n++) { 65036e4bdcSSatish Balay pts[n * dim] = n * h; 669371c9d4SSatish Balay for (int i = 1; i < dim; i++) pts[n * dim + i] = 0.0; 67036e4bdcSSatish Balay } 68f17f7ee2SSatish Balay } 69f17f7ee2SSatish Balay } 70f17f7ee2SSatish Balay 719371c9d4SSatish Balay PetscPointCloud(const PetscPointCloud<T> &other) { 72f17f7ee2SSatish Balay size_t N = other.dimension * other.num_points; 73f17f7ee2SSatish Balay this->dimension = other.dimension; 74f17f7ee2SSatish Balay this->num_points = other.num_points; 75f17f7ee2SSatish Balay this->pts.resize(N); 769371c9d4SSatish Balay for (size_t i = 0; i < N; i++) this->pts[i] = other.pts[i]; 77f17f7ee2SSatish Balay } 78f17f7ee2SSatish Balay 799371c9d4SSatish Balay int getDimension() const { return dimension; } 80f17f7ee2SSatish Balay 819371c9d4SSatish Balay size_t getDataSetSize() const { return num_points; } 82f17f7ee2SSatish Balay 839371c9d4SSatish Balay T getDataPoint(size_t idx, int dim) const { 84f17f7ee2SSatish Balay assert(dim < dimension && idx < num_points); 85f17f7ee2SSatish Balay return pts[idx * dimension + dim]; 86f17f7ee2SSatish Balay } 87f17f7ee2SSatish Balay 889371c9d4SSatish Balay void Print(std::ostream &out = std::cout) { 89f17f7ee2SSatish Balay out << "Dimension: " << dimension << std::endl; 90f17f7ee2SSatish Balay out << "NumPoints: " << num_points << std::endl; 91f17f7ee2SSatish Balay for (size_t n = 0; n < num_points; n++) { 929371c9d4SSatish Balay for (int d = 0; d < dimension; d++) out << pts[n * dimension + d] << " "; 93f17f7ee2SSatish Balay out << std::endl; 94f17f7ee2SSatish Balay } 95f17f7ee2SSatish Balay } 96f17f7ee2SSatish Balay }; 97f17f7ee2SSatish Balay 989371c9d4SSatish Balay template <class T> 999371c9d4SSatish Balay class PetscFunctionGenerator { 100f17f7ee2SSatish Balay private: 101f17f7ee2SSatish Balay MatH2OpusKernel k; 102f17f7ee2SSatish Balay int dim; 103f17f7ee2SSatish Balay void *ctx; 104f17f7ee2SSatish Balay 105f17f7ee2SSatish Balay public: 1069371c9d4SSatish Balay PetscFunctionGenerator(MatH2OpusKernel k, int dim, void *ctx) { 1079371c9d4SSatish Balay this->k = k; 1089371c9d4SSatish Balay this->dim = dim; 1099371c9d4SSatish Balay this->ctx = ctx; 110f17f7ee2SSatish Balay } 1119371c9d4SSatish Balay PetscFunctionGenerator(PetscFunctionGenerator &other) { 1129371c9d4SSatish Balay this->k = other.k; 1139371c9d4SSatish Balay this->dim = other.dim; 1149371c9d4SSatish Balay this->ctx = other.ctx; 1159371c9d4SSatish Balay } 1169371c9d4SSatish Balay T operator()(PetscReal *pt1, PetscReal *pt2) { return (T)((*this->k)(this->dim, pt1, pt2, this->ctx)); } 117f17f7ee2SSatish Balay }; 118f17f7ee2SSatish Balay 119f17f7ee2SSatish Balay #include <../src/mat/impls/h2opus/math2opussampler.hpp> 120f17f7ee2SSatish Balay 121f17f7ee2SSatish Balay /* just to not clutter the code */ 122f17f7ee2SSatish Balay #if !defined(H2OPUS_USE_GPU) 123f17f7ee2SSatish Balay typedef HMatrix HMatrix_GPU; 124f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 125f17f7ee2SSatish Balay typedef DistributedHMatrix DistributedHMatrix_GPU; 126f17f7ee2SSatish Balay #endif 127f17f7ee2SSatish Balay #endif 128f17f7ee2SSatish Balay 129f17f7ee2SSatish Balay typedef struct { 130f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 131f17f7ee2SSatish Balay distributedH2OpusHandle_t handle; 132f17f7ee2SSatish Balay #else 133f17f7ee2SSatish Balay h2opusHandle_t handle; 134f17f7ee2SSatish Balay #endif 135f17f7ee2SSatish Balay /* Sequential and parallel matrices are two different classes at the moment */ 136f17f7ee2SSatish Balay HMatrix *hmatrix; 137f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 138f17f7ee2SSatish Balay DistributedHMatrix *dist_hmatrix; 139f17f7ee2SSatish Balay #else 140f17f7ee2SSatish Balay HMatrix *dist_hmatrix; /* just to not clutter the code */ 141f17f7ee2SSatish Balay #endif 142f17f7ee2SSatish Balay /* May use permutations */ 143f17f7ee2SSatish Balay PetscSF sf; 144f17f7ee2SSatish Balay PetscLayout h2opus_rmap, h2opus_cmap; 145f17f7ee2SSatish Balay IS h2opus_indexmap; 146f17f7ee2SSatish Balay thrust::host_vector<PetscScalar> *xx, *yy; 147f17f7ee2SSatish Balay PetscInt xxs, yys; 148f17f7ee2SSatish Balay PetscBool multsetup; 149f17f7ee2SSatish Balay 150f17f7ee2SSatish Balay /* GPU */ 151f17f7ee2SSatish Balay HMatrix_GPU *hmatrix_gpu; 152f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 153f17f7ee2SSatish Balay DistributedHMatrix_GPU *dist_hmatrix_gpu; 154f17f7ee2SSatish Balay #else 155f17f7ee2SSatish Balay HMatrix_GPU *dist_hmatrix_gpu; /* just to not clutter the code */ 156f17f7ee2SSatish Balay #endif 157f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 158f17f7ee2SSatish Balay thrust::device_vector<PetscScalar> *xx_gpu, *yy_gpu; 159f17f7ee2SSatish Balay PetscInt xxs_gpu, yys_gpu; 160f17f7ee2SSatish Balay #endif 161f17f7ee2SSatish Balay 162f17f7ee2SSatish Balay /* construction from matvecs */ 163f17f7ee2SSatish Balay PetscMatrixSampler *sampler; 164f17f7ee2SSatish Balay PetscBool nativemult; 165f17f7ee2SSatish Balay 166f17f7ee2SSatish Balay /* Admissibility */ 167f17f7ee2SSatish Balay PetscReal eta; 168f17f7ee2SSatish Balay PetscInt leafsize; 169f17f7ee2SSatish Balay 170f17f7ee2SSatish Balay /* for dof reordering */ 171f17f7ee2SSatish Balay PetscPointCloud<PetscReal> *ptcloud; 172f17f7ee2SSatish Balay 173f17f7ee2SSatish Balay /* kernel for generating matrix entries */ 174f17f7ee2SSatish Balay PetscFunctionGenerator<PetscScalar> *kernel; 175f17f7ee2SSatish Balay 176f17f7ee2SSatish Balay /* basis orthogonalized? */ 177f17f7ee2SSatish Balay PetscBool orthogonal; 178f17f7ee2SSatish Balay 179f17f7ee2SSatish Balay /* customization */ 180f17f7ee2SSatish Balay PetscInt basisord; 181f17f7ee2SSatish Balay PetscInt max_rank; 182f17f7ee2SSatish Balay PetscInt bs; 183f17f7ee2SSatish Balay PetscReal rtol; 184f17f7ee2SSatish Balay PetscInt norm_max_samples; 185f17f7ee2SSatish Balay PetscBool check_construction; 186f17f7ee2SSatish Balay PetscBool hara_verbose; 187036e4bdcSSatish Balay PetscBool resize; 188f17f7ee2SSatish Balay 189f17f7ee2SSatish Balay /* keeps track of MatScale values */ 190f17f7ee2SSatish Balay PetscScalar s; 191f17f7ee2SSatish Balay } Mat_H2OPUS; 192f17f7ee2SSatish Balay 1939371c9d4SSatish Balay static PetscErrorCode MatDestroy_H2OPUS(Mat A) { 194f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 195f17f7ee2SSatish Balay 196f17f7ee2SSatish Balay PetscFunctionBegin; 197f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 198f17f7ee2SSatish Balay h2opusDestroyDistributedHandle(a->handle); 199f17f7ee2SSatish Balay #else 200f17f7ee2SSatish Balay h2opusDestroyHandle(a->handle); 201f17f7ee2SSatish Balay #endif 202f17f7ee2SSatish Balay delete a->dist_hmatrix; 203f17f7ee2SSatish Balay delete a->hmatrix; 204f17f7ee2SSatish Balay PetscCall(PetscSFDestroy(&a->sf)); 205f17f7ee2SSatish Balay PetscCall(PetscLayoutDestroy(&a->h2opus_rmap)); 206f17f7ee2SSatish Balay PetscCall(PetscLayoutDestroy(&a->h2opus_cmap)); 207f17f7ee2SSatish Balay PetscCall(ISDestroy(&a->h2opus_indexmap)); 208f17f7ee2SSatish Balay delete a->xx; 209f17f7ee2SSatish Balay delete a->yy; 210f17f7ee2SSatish Balay delete a->hmatrix_gpu; 211f17f7ee2SSatish Balay delete a->dist_hmatrix_gpu; 212f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 213f17f7ee2SSatish Balay delete a->xx_gpu; 214f17f7ee2SSatish Balay delete a->yy_gpu; 215f17f7ee2SSatish Balay #endif 216f17f7ee2SSatish Balay delete a->sampler; 217f17f7ee2SSatish Balay delete a->ptcloud; 218f17f7ee2SSatish Balay delete a->kernel; 219f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_seqdense_C", NULL)); 220f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_seqdensecuda_C", NULL)); 221f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_mpidense_C", NULL)); 222f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_mpidensecuda_C", NULL)); 223f17f7ee2SSatish Balay PetscCall(PetscObjectChangeTypeName((PetscObject)A, NULL)); 224f17f7ee2SSatish Balay PetscCall(PetscFree(A->data)); 225f17f7ee2SSatish Balay PetscFunctionReturn(0); 226f17f7ee2SSatish Balay } 227f17f7ee2SSatish Balay 2289371c9d4SSatish Balay PetscErrorCode MatH2OpusSetNativeMult(Mat A, PetscBool nm) { 229f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 230f17f7ee2SSatish Balay PetscBool ish2opus; 231f17f7ee2SSatish Balay 232f17f7ee2SSatish Balay PetscFunctionBegin; 233f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 234f17f7ee2SSatish Balay PetscValidLogicalCollectiveBool(A, nm, 2); 235f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 236f17f7ee2SSatish Balay if (ish2opus) { 237f17f7ee2SSatish Balay if (a->h2opus_rmap) { /* need to swap layouts for vector creation */ 238f17f7ee2SSatish Balay if ((!a->nativemult && nm) || (a->nativemult && !nm)) { 239f17f7ee2SSatish Balay PetscLayout t; 240f17f7ee2SSatish Balay t = A->rmap; 241f17f7ee2SSatish Balay A->rmap = a->h2opus_rmap; 242f17f7ee2SSatish Balay a->h2opus_rmap = t; 243f17f7ee2SSatish Balay t = A->cmap; 244f17f7ee2SSatish Balay A->cmap = a->h2opus_cmap; 245f17f7ee2SSatish Balay a->h2opus_cmap = t; 246f17f7ee2SSatish Balay } 247f17f7ee2SSatish Balay } 248f17f7ee2SSatish Balay a->nativemult = nm; 249f17f7ee2SSatish Balay } 250f17f7ee2SSatish Balay PetscFunctionReturn(0); 251f17f7ee2SSatish Balay } 252f17f7ee2SSatish Balay 2539371c9d4SSatish Balay PetscErrorCode MatH2OpusGetNativeMult(Mat A, PetscBool *nm) { 254f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 255f17f7ee2SSatish Balay PetscBool ish2opus; 256f17f7ee2SSatish Balay 257f17f7ee2SSatish Balay PetscFunctionBegin; 258f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 259f17f7ee2SSatish Balay PetscValidPointer(nm, 2); 260f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 261f17f7ee2SSatish Balay PetscCheck(ish2opus, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for type %s", ((PetscObject)A)->type_name); 262f17f7ee2SSatish Balay *nm = a->nativemult; 263f17f7ee2SSatish Balay PetscFunctionReturn(0); 264f17f7ee2SSatish Balay } 265f17f7ee2SSatish Balay 2669371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode MatNorm_H2OPUS(Mat A, NormType normtype, PetscReal *n) { 267f17f7ee2SSatish Balay PetscBool ish2opus; 268f17f7ee2SSatish Balay PetscInt nmax = PETSC_DECIDE; 269f17f7ee2SSatish Balay Mat_H2OPUS *a = NULL; 270f17f7ee2SSatish Balay PetscBool mult = PETSC_FALSE; 271f17f7ee2SSatish Balay 272f17f7ee2SSatish Balay PetscFunctionBegin; 273f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 274f17f7ee2SSatish Balay if (ish2opus) { /* set userdefine number of samples and fastpath for mult (norms are order independent) */ 275f17f7ee2SSatish Balay a = (Mat_H2OPUS *)A->data; 276f17f7ee2SSatish Balay 277f17f7ee2SSatish Balay nmax = a->norm_max_samples; 278f17f7ee2SSatish Balay mult = a->nativemult; 279f17f7ee2SSatish Balay PetscCall(MatH2OpusSetNativeMult(A, PETSC_TRUE)); 280f17f7ee2SSatish Balay } else { 281f17f7ee2SSatish Balay PetscCall(PetscOptionsGetInt(((PetscObject)A)->options, ((PetscObject)A)->prefix, "-mat_approximate_norm_samples", &nmax, NULL)); 282f17f7ee2SSatish Balay } 283f17f7ee2SSatish Balay PetscCall(MatApproximateNorm_Private(A, normtype, nmax, n)); 284f17f7ee2SSatish Balay if (a) PetscCall(MatH2OpusSetNativeMult(A, mult)); 285f17f7ee2SSatish Balay PetscFunctionReturn(0); 286f17f7ee2SSatish Balay } 287f17f7ee2SSatish Balay 2889371c9d4SSatish Balay static PetscErrorCode MatH2OpusResizeBuffers_Private(Mat A, PetscInt xN, PetscInt yN) { 289f17f7ee2SSatish Balay Mat_H2OPUS *h2opus = (Mat_H2OPUS *)A->data; 290f17f7ee2SSatish Balay PetscInt n; 291f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 292f17f7ee2SSatish Balay 293f17f7ee2SSatish Balay PetscFunctionBegin; 294f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 295f17f7ee2SSatish Balay boundtocpu = A->boundtocpu; 296f17f7ee2SSatish Balay #endif 297f17f7ee2SSatish Balay PetscCall(PetscSFGetGraph(h2opus->sf, NULL, &n, NULL, NULL)); 298f17f7ee2SSatish Balay if (boundtocpu) { 2999371c9d4SSatish Balay if (h2opus->xxs < xN) { 3009371c9d4SSatish Balay h2opus->xx->resize(n * xN); 3019371c9d4SSatish Balay h2opus->xxs = xN; 3029371c9d4SSatish Balay } 3039371c9d4SSatish Balay if (h2opus->yys < yN) { 3049371c9d4SSatish Balay h2opus->yy->resize(n * yN); 3059371c9d4SSatish Balay h2opus->yys = yN; 3069371c9d4SSatish Balay } 307f17f7ee2SSatish Balay } 308f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 309f17f7ee2SSatish Balay if (!boundtocpu) { 3109371c9d4SSatish Balay if (h2opus->xxs_gpu < xN) { 3119371c9d4SSatish Balay h2opus->xx_gpu->resize(n * xN); 3129371c9d4SSatish Balay h2opus->xxs_gpu = xN; 3139371c9d4SSatish Balay } 3149371c9d4SSatish Balay if (h2opus->yys_gpu < yN) { 3159371c9d4SSatish Balay h2opus->yy_gpu->resize(n * yN); 3169371c9d4SSatish Balay h2opus->yys_gpu = yN; 3179371c9d4SSatish Balay } 318f17f7ee2SSatish Balay } 319f17f7ee2SSatish Balay #endif 320f17f7ee2SSatish Balay PetscFunctionReturn(0); 321f17f7ee2SSatish Balay } 322f17f7ee2SSatish Balay 3239371c9d4SSatish Balay static PetscErrorCode MatMultNKernel_H2OPUS(Mat A, PetscBool transA, Mat B, Mat C) { 324f17f7ee2SSatish Balay Mat_H2OPUS *h2opus = (Mat_H2OPUS *)A->data; 325f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 326f17f7ee2SSatish Balay h2opusHandle_t handle = h2opus->handle->handle; 327f17f7ee2SSatish Balay #else 328f17f7ee2SSatish Balay h2opusHandle_t handle = h2opus->handle; 329f17f7ee2SSatish Balay #endif 330f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 331f17f7ee2SSatish Balay PetscScalar *xx, *yy, *uxx, *uyy; 332f17f7ee2SSatish Balay PetscInt blda, clda; 333f17f7ee2SSatish Balay PetscMPIInt size; 334f17f7ee2SSatish Balay PetscSF bsf, csf; 335f17f7ee2SSatish Balay PetscBool usesf = (PetscBool)(h2opus->sf && !h2opus->nativemult); 336f17f7ee2SSatish Balay 337f17f7ee2SSatish Balay PetscFunctionBegin; 338f17f7ee2SSatish Balay HLibProfile::clear(); 339f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 340f17f7ee2SSatish Balay boundtocpu = A->boundtocpu; 341f17f7ee2SSatish Balay #endif 342f17f7ee2SSatish Balay PetscCall(MatDenseGetLDA(B, &blda)); 343f17f7ee2SSatish Balay PetscCall(MatDenseGetLDA(C, &clda)); 344f17f7ee2SSatish Balay if (usesf) { 345f17f7ee2SSatish Balay PetscInt n; 346f17f7ee2SSatish Balay 347f17f7ee2SSatish Balay PetscCall(MatDenseGetH2OpusVectorSF(B, h2opus->sf, &bsf)); 348f17f7ee2SSatish Balay PetscCall(MatDenseGetH2OpusVectorSF(C, h2opus->sf, &csf)); 349f17f7ee2SSatish Balay 350f17f7ee2SSatish Balay PetscCall(MatH2OpusResizeBuffers_Private(A, B->cmap->N, C->cmap->N)); 351f17f7ee2SSatish Balay PetscCall(PetscSFGetGraph(h2opus->sf, NULL, &n, NULL, NULL)); 352f17f7ee2SSatish Balay blda = n; 353f17f7ee2SSatish Balay clda = n; 354f17f7ee2SSatish Balay } 355f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 356f17f7ee2SSatish Balay if (boundtocpu) { 357f17f7ee2SSatish Balay PetscCall(MatDenseGetArrayRead(B, (const PetscScalar **)&xx)); 358f17f7ee2SSatish Balay PetscCall(MatDenseGetArrayWrite(C, &yy)); 359f17f7ee2SSatish Balay if (usesf) { 360f17f7ee2SSatish Balay uxx = MatH2OpusGetThrustPointer(*h2opus->xx); 361f17f7ee2SSatish Balay uyy = MatH2OpusGetThrustPointer(*h2opus->yy); 362f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(bsf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 363f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(bsf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 364f17f7ee2SSatish Balay } else { 365f17f7ee2SSatish Balay uxx = xx; 366f17f7ee2SSatish Balay uyy = yy; 367f17f7ee2SSatish Balay } 368f17f7ee2SSatish Balay if (size > 1) { 369f17f7ee2SSatish Balay PetscCheck(h2opus->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed CPU matrix"); 370036e4bdcSSatish Balay PetscCheck(!transA || A->symmetric, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "MatMultTranspose not yet coded in parallel"); 371f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 372f17f7ee2SSatish Balay distributed_hgemv(/* transA ? H2Opus_Trans : H2Opus_NoTrans, */ h2opus->s, *h2opus->dist_hmatrix, uxx, blda, 0.0, uyy, clda, B->cmap->N, h2opus->handle); 373f17f7ee2SSatish Balay #endif 374f17f7ee2SSatish Balay } else { 375f17f7ee2SSatish Balay PetscCheck(h2opus->hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 376f17f7ee2SSatish Balay hgemv(transA ? H2Opus_Trans : H2Opus_NoTrans, h2opus->s, *h2opus->hmatrix, uxx, blda, 0.0, uyy, clda, B->cmap->N, handle); 377f17f7ee2SSatish Balay } 378f17f7ee2SSatish Balay PetscCall(MatDenseRestoreArrayRead(B, (const PetscScalar **)&xx)); 379f17f7ee2SSatish Balay if (usesf) { 380f17f7ee2SSatish Balay PetscCall(PetscSFReduceBegin(csf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 381f17f7ee2SSatish Balay PetscCall(PetscSFReduceEnd(csf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 382f17f7ee2SSatish Balay } 383f17f7ee2SSatish Balay PetscCall(MatDenseRestoreArrayWrite(C, &yy)); 384f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 385f17f7ee2SSatish Balay } else { 386f17f7ee2SSatish Balay PetscBool ciscuda, biscuda; 387f17f7ee2SSatish Balay 388f17f7ee2SSatish Balay /* If not of type seqdensecuda, convert on the fly (i.e. allocate GPU memory) */ 389f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)B, &biscuda, MATSEQDENSECUDA, MATMPIDENSECUDA, "")); 39048a46eb9SPierre Jolivet if (!biscuda) PetscCall(MatConvert(B, MATDENSECUDA, MAT_INPLACE_MATRIX, &B)); 391f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &ciscuda, MATSEQDENSECUDA, MATMPIDENSECUDA, "")); 392f17f7ee2SSatish Balay if (!ciscuda) { 393f17f7ee2SSatish Balay C->assembled = PETSC_TRUE; 394f17f7ee2SSatish Balay PetscCall(MatConvert(C, MATDENSECUDA, MAT_INPLACE_MATRIX, &C)); 395f17f7ee2SSatish Balay } 396f17f7ee2SSatish Balay PetscCall(MatDenseCUDAGetArrayRead(B, (const PetscScalar **)&xx)); 397f17f7ee2SSatish Balay PetscCall(MatDenseCUDAGetArrayWrite(C, &yy)); 398f17f7ee2SSatish Balay if (usesf) { 399f17f7ee2SSatish Balay uxx = MatH2OpusGetThrustPointer(*h2opus->xx_gpu); 400f17f7ee2SSatish Balay uyy = MatH2OpusGetThrustPointer(*h2opus->yy_gpu); 401f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(bsf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 402f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(bsf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 403f17f7ee2SSatish Balay } else { 404f17f7ee2SSatish Balay uxx = xx; 405f17f7ee2SSatish Balay uyy = yy; 406f17f7ee2SSatish Balay } 407f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeBegin()); 408f17f7ee2SSatish Balay if (size > 1) { 409f17f7ee2SSatish Balay PetscCheck(h2opus->dist_hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed GPU matrix"); 410036e4bdcSSatish Balay PetscCheck(!transA || A->symmetric, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "MatMultTranspose not yet coded in parallel"); 411f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 412f17f7ee2SSatish Balay distributed_hgemv(/* transA ? H2Opus_Trans : H2Opus_NoTrans, */ h2opus->s, *h2opus->dist_hmatrix_gpu, uxx, blda, 0.0, uyy, clda, B->cmap->N, h2opus->handle); 413f17f7ee2SSatish Balay #endif 414f17f7ee2SSatish Balay } else { 415f17f7ee2SSatish Balay PetscCheck(h2opus->hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 416f17f7ee2SSatish Balay hgemv(transA ? H2Opus_Trans : H2Opus_NoTrans, h2opus->s, *h2opus->hmatrix_gpu, uxx, blda, 0.0, uyy, clda, B->cmap->N, handle); 417f17f7ee2SSatish Balay } 418f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeEnd()); 419f17f7ee2SSatish Balay PetscCall(MatDenseCUDARestoreArrayRead(B, (const PetscScalar **)&xx)); 420f17f7ee2SSatish Balay if (usesf) { 421f17f7ee2SSatish Balay PetscCall(PetscSFReduceBegin(csf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 422f17f7ee2SSatish Balay PetscCall(PetscSFReduceEnd(csf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 423f17f7ee2SSatish Balay } 424f17f7ee2SSatish Balay PetscCall(MatDenseCUDARestoreArrayWrite(C, &yy)); 42548a46eb9SPierre Jolivet if (!biscuda) PetscCall(MatConvert(B, MATDENSE, MAT_INPLACE_MATRIX, &B)); 42648a46eb9SPierre Jolivet if (!ciscuda) PetscCall(MatConvert(C, MATDENSE, MAT_INPLACE_MATRIX, &C)); 427f17f7ee2SSatish Balay #endif 428f17f7ee2SSatish Balay } 429f17f7ee2SSatish Balay { /* log flops */ 430f17f7ee2SSatish Balay double gops, time, perf, dev; 431f17f7ee2SSatish Balay HLibProfile::getHgemvPerf(gops, time, perf, dev); 432f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 433f17f7ee2SSatish Balay if (boundtocpu) { 434f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 435f17f7ee2SSatish Balay } else { 436f17f7ee2SSatish Balay PetscCall(PetscLogGpuFlops(1e9 * gops)); 437f17f7ee2SSatish Balay } 438f17f7ee2SSatish Balay #else 439f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 440f17f7ee2SSatish Balay #endif 441f17f7ee2SSatish Balay } 442f17f7ee2SSatish Balay PetscFunctionReturn(0); 443f17f7ee2SSatish Balay } 444f17f7ee2SSatish Balay 4459371c9d4SSatish Balay static PetscErrorCode MatProductNumeric_H2OPUS(Mat C) { 446f17f7ee2SSatish Balay Mat_Product *product = C->product; 447f17f7ee2SSatish Balay 448f17f7ee2SSatish Balay PetscFunctionBegin; 449f17f7ee2SSatish Balay MatCheckProduct(C, 1); 450f17f7ee2SSatish Balay switch (product->type) { 4519371c9d4SSatish Balay case MATPRODUCT_AB: PetscCall(MatMultNKernel_H2OPUS(product->A, PETSC_FALSE, product->B, C)); break; 4529371c9d4SSatish Balay case MATPRODUCT_AtB: PetscCall(MatMultNKernel_H2OPUS(product->A, PETSC_TRUE, product->B, C)); break; 4539371c9d4SSatish Balay default: SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "MatProduct type %s is not supported", MatProductTypes[product->type]); 454f17f7ee2SSatish Balay } 455f17f7ee2SSatish Balay PetscFunctionReturn(0); 456f17f7ee2SSatish Balay } 457f17f7ee2SSatish Balay 4589371c9d4SSatish Balay static PetscErrorCode MatProductSymbolic_H2OPUS(Mat C) { 459f17f7ee2SSatish Balay Mat_Product *product = C->product; 460f17f7ee2SSatish Balay PetscBool cisdense; 461f17f7ee2SSatish Balay Mat A, B; 462f17f7ee2SSatish Balay 463f17f7ee2SSatish Balay PetscFunctionBegin; 464f17f7ee2SSatish Balay MatCheckProduct(C, 1); 465f17f7ee2SSatish Balay A = product->A; 466f17f7ee2SSatish Balay B = product->B; 467f17f7ee2SSatish Balay switch (product->type) { 468f17f7ee2SSatish Balay case MATPRODUCT_AB: 469f17f7ee2SSatish Balay PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, A->rmap->N, B->cmap->N)); 470f17f7ee2SSatish Balay PetscCall(MatSetBlockSizesFromMats(C, product->A, product->B)); 471f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATSEQDENSE, MATMPIDENSE, MATSEQDENSECUDA, MATMPIDENSECUDA, "")); 472f17f7ee2SSatish Balay if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)product->B)->type_name)); 473f17f7ee2SSatish Balay PetscCall(MatSetUp(C)); 474f17f7ee2SSatish Balay break; 475f17f7ee2SSatish Balay case MATPRODUCT_AtB: 476f17f7ee2SSatish Balay PetscCall(MatSetSizes(C, A->cmap->n, B->cmap->n, A->cmap->N, B->cmap->N)); 477f17f7ee2SSatish Balay PetscCall(MatSetBlockSizesFromMats(C, product->A, product->B)); 478f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATSEQDENSE, MATMPIDENSE, MATSEQDENSECUDA, MATMPIDENSECUDA, "")); 479f17f7ee2SSatish Balay if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)product->B)->type_name)); 480f17f7ee2SSatish Balay PetscCall(MatSetUp(C)); 481f17f7ee2SSatish Balay break; 4829371c9d4SSatish Balay default: SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "MatProduct type %s is not supported", MatProductTypes[product->type]); 483f17f7ee2SSatish Balay } 484f17f7ee2SSatish Balay C->ops->productsymbolic = NULL; 485f17f7ee2SSatish Balay C->ops->productnumeric = MatProductNumeric_H2OPUS; 486f17f7ee2SSatish Balay PetscFunctionReturn(0); 487f17f7ee2SSatish Balay } 488f17f7ee2SSatish Balay 4899371c9d4SSatish Balay static PetscErrorCode MatProductSetFromOptions_H2OPUS(Mat C) { 490f17f7ee2SSatish Balay PetscFunctionBegin; 491f17f7ee2SSatish Balay MatCheckProduct(C, 1); 492ad540459SPierre Jolivet if (C->product->type == MATPRODUCT_AB || C->product->type == MATPRODUCT_AtB) C->ops->productsymbolic = MatProductSymbolic_H2OPUS; 493f17f7ee2SSatish Balay PetscFunctionReturn(0); 494f17f7ee2SSatish Balay } 495f17f7ee2SSatish Balay 4969371c9d4SSatish Balay static PetscErrorCode MatMultKernel_H2OPUS(Mat A, Vec x, PetscScalar sy, Vec y, PetscBool trans) { 497f17f7ee2SSatish Balay Mat_H2OPUS *h2opus = (Mat_H2OPUS *)A->data; 498f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 499f17f7ee2SSatish Balay h2opusHandle_t handle = h2opus->handle->handle; 500f17f7ee2SSatish Balay #else 501f17f7ee2SSatish Balay h2opusHandle_t handle = h2opus->handle; 502f17f7ee2SSatish Balay #endif 503f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 504f17f7ee2SSatish Balay PetscInt n; 505f17f7ee2SSatish Balay PetscScalar *xx, *yy, *uxx, *uyy; 506f17f7ee2SSatish Balay PetscMPIInt size; 507f17f7ee2SSatish Balay PetscBool usesf = (PetscBool)(h2opus->sf && !h2opus->nativemult); 508f17f7ee2SSatish Balay 509f17f7ee2SSatish Balay PetscFunctionBegin; 510f17f7ee2SSatish Balay HLibProfile::clear(); 511f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 512f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 513f17f7ee2SSatish Balay boundtocpu = A->boundtocpu; 514f17f7ee2SSatish Balay #endif 515f17f7ee2SSatish Balay if (usesf) { 516f17f7ee2SSatish Balay PetscCall(PetscSFGetGraph(h2opus->sf, NULL, &n, NULL, NULL)); 517f17f7ee2SSatish Balay } else n = A->rmap->n; 518f17f7ee2SSatish Balay if (boundtocpu) { 519f17f7ee2SSatish Balay PetscCall(VecGetArrayRead(x, (const PetscScalar **)&xx)); 520f17f7ee2SSatish Balay if (sy == 0.0) { 521f17f7ee2SSatish Balay PetscCall(VecGetArrayWrite(y, &yy)); 522f17f7ee2SSatish Balay } else { 523f17f7ee2SSatish Balay PetscCall(VecGetArray(y, &yy)); 524f17f7ee2SSatish Balay } 525f17f7ee2SSatish Balay if (usesf) { 526f17f7ee2SSatish Balay uxx = MatH2OpusGetThrustPointer(*h2opus->xx); 527f17f7ee2SSatish Balay uyy = MatH2OpusGetThrustPointer(*h2opus->yy); 528f17f7ee2SSatish Balay 529f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(h2opus->sf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 530f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(h2opus->sf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 531f17f7ee2SSatish Balay if (sy != 0.0) { 532f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(h2opus->sf, MPIU_SCALAR, yy, uyy, MPI_REPLACE)); 533f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(h2opus->sf, MPIU_SCALAR, yy, uyy, MPI_REPLACE)); 534f17f7ee2SSatish Balay } 535f17f7ee2SSatish Balay } else { 536f17f7ee2SSatish Balay uxx = xx; 537f17f7ee2SSatish Balay uyy = yy; 538f17f7ee2SSatish Balay } 539f17f7ee2SSatish Balay if (size > 1) { 540f17f7ee2SSatish Balay PetscCheck(h2opus->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed CPU matrix"); 541036e4bdcSSatish Balay PetscCheck(!trans || A->symmetric, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "MatMultTranspose not yet coded in parallel"); 542f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 543f17f7ee2SSatish Balay distributed_hgemv(/*trans ? H2Opus_Trans : H2Opus_NoTrans, */ h2opus->s, *h2opus->dist_hmatrix, uxx, n, sy, uyy, n, 1, h2opus->handle); 544f17f7ee2SSatish Balay #endif 545f17f7ee2SSatish Balay } else { 546f17f7ee2SSatish Balay PetscCheck(h2opus->hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 547f17f7ee2SSatish Balay hgemv(trans ? H2Opus_Trans : H2Opus_NoTrans, h2opus->s, *h2opus->hmatrix, uxx, n, sy, uyy, n, 1, handle); 548f17f7ee2SSatish Balay } 549f17f7ee2SSatish Balay PetscCall(VecRestoreArrayRead(x, (const PetscScalar **)&xx)); 550f17f7ee2SSatish Balay if (usesf) { 551f17f7ee2SSatish Balay PetscCall(PetscSFReduceBegin(h2opus->sf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 552f17f7ee2SSatish Balay PetscCall(PetscSFReduceEnd(h2opus->sf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 553f17f7ee2SSatish Balay } 554f17f7ee2SSatish Balay if (sy == 0.0) { 555f17f7ee2SSatish Balay PetscCall(VecRestoreArrayWrite(y, &yy)); 556f17f7ee2SSatish Balay } else { 557f17f7ee2SSatish Balay PetscCall(VecRestoreArray(y, &yy)); 558f17f7ee2SSatish Balay } 559f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 560f17f7ee2SSatish Balay } else { 561f17f7ee2SSatish Balay PetscCall(VecCUDAGetArrayRead(x, (const PetscScalar **)&xx)); 562f17f7ee2SSatish Balay if (sy == 0.0) { 563f17f7ee2SSatish Balay PetscCall(VecCUDAGetArrayWrite(y, &yy)); 564f17f7ee2SSatish Balay } else { 565f17f7ee2SSatish Balay PetscCall(VecCUDAGetArray(y, &yy)); 566f17f7ee2SSatish Balay } 567f17f7ee2SSatish Balay if (usesf) { 568f17f7ee2SSatish Balay uxx = MatH2OpusGetThrustPointer(*h2opus->xx_gpu); 569f17f7ee2SSatish Balay uyy = MatH2OpusGetThrustPointer(*h2opus->yy_gpu); 570f17f7ee2SSatish Balay 571f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(h2opus->sf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 572f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(h2opus->sf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 573f17f7ee2SSatish Balay if (sy != 0.0) { 574f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(h2opus->sf, MPIU_SCALAR, yy, uyy, MPI_REPLACE)); 575f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(h2opus->sf, MPIU_SCALAR, yy, uyy, MPI_REPLACE)); 576f17f7ee2SSatish Balay } 577f17f7ee2SSatish Balay } else { 578f17f7ee2SSatish Balay uxx = xx; 579f17f7ee2SSatish Balay uyy = yy; 580f17f7ee2SSatish Balay } 581f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeBegin()); 582f17f7ee2SSatish Balay if (size > 1) { 583f17f7ee2SSatish Balay PetscCheck(h2opus->dist_hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed GPU matrix"); 584036e4bdcSSatish Balay PetscCheck(!trans || A->symmetric, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "MatMultTranspose not yet coded in parallel"); 585f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 586f17f7ee2SSatish Balay distributed_hgemv(/*trans ? H2Opus_Trans : H2Opus_NoTrans, */ h2opus->s, *h2opus->dist_hmatrix_gpu, uxx, n, sy, uyy, n, 1, h2opus->handle); 587f17f7ee2SSatish Balay #endif 588f17f7ee2SSatish Balay } else { 589f17f7ee2SSatish Balay PetscCheck(h2opus->hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 590f17f7ee2SSatish Balay hgemv(trans ? H2Opus_Trans : H2Opus_NoTrans, h2opus->s, *h2opus->hmatrix_gpu, uxx, n, sy, uyy, n, 1, handle); 591f17f7ee2SSatish Balay } 592f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeEnd()); 593f17f7ee2SSatish Balay PetscCall(VecCUDARestoreArrayRead(x, (const PetscScalar **)&xx)); 594f17f7ee2SSatish Balay if (usesf) { 595f17f7ee2SSatish Balay PetscCall(PetscSFReduceBegin(h2opus->sf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 596f17f7ee2SSatish Balay PetscCall(PetscSFReduceEnd(h2opus->sf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 597f17f7ee2SSatish Balay } 598f17f7ee2SSatish Balay if (sy == 0.0) { 599f17f7ee2SSatish Balay PetscCall(VecCUDARestoreArrayWrite(y, &yy)); 600f17f7ee2SSatish Balay } else { 601f17f7ee2SSatish Balay PetscCall(VecCUDARestoreArray(y, &yy)); 602f17f7ee2SSatish Balay } 603f17f7ee2SSatish Balay #endif 604f17f7ee2SSatish Balay } 605f17f7ee2SSatish Balay { /* log flops */ 606f17f7ee2SSatish Balay double gops, time, perf, dev; 607f17f7ee2SSatish Balay HLibProfile::getHgemvPerf(gops, time, perf, dev); 608f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 609f17f7ee2SSatish Balay if (boundtocpu) { 610f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 611f17f7ee2SSatish Balay } else { 612f17f7ee2SSatish Balay PetscCall(PetscLogGpuFlops(1e9 * gops)); 613f17f7ee2SSatish Balay } 614f17f7ee2SSatish Balay #else 615f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 616f17f7ee2SSatish Balay #endif 617f17f7ee2SSatish Balay } 618f17f7ee2SSatish Balay PetscFunctionReturn(0); 619f17f7ee2SSatish Balay } 620f17f7ee2SSatish Balay 6219371c9d4SSatish Balay static PetscErrorCode MatMultTranspose_H2OPUS(Mat A, Vec x, Vec y) { 622f17f7ee2SSatish Balay PetscBool xiscuda, yiscuda; 623f17f7ee2SSatish Balay 624f17f7ee2SSatish Balay PetscFunctionBegin; 625f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)x, &xiscuda, VECSEQCUDA, VECMPICUDA, "")); 626f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)y, &yiscuda, VECSEQCUDA, VECMPICUDA, "")); 627f17f7ee2SSatish Balay PetscCall(MatH2OpusUpdateIfNeeded(A, !xiscuda || !yiscuda)); 628f17f7ee2SSatish Balay PetscCall(MatMultKernel_H2OPUS(A, x, 0.0, y, PETSC_TRUE)); 629f17f7ee2SSatish Balay PetscFunctionReturn(0); 630f17f7ee2SSatish Balay } 631f17f7ee2SSatish Balay 6329371c9d4SSatish Balay static PetscErrorCode MatMult_H2OPUS(Mat A, Vec x, Vec y) { 633f17f7ee2SSatish Balay PetscBool xiscuda, yiscuda; 634f17f7ee2SSatish Balay 635f17f7ee2SSatish Balay PetscFunctionBegin; 636f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)x, &xiscuda, VECSEQCUDA, VECMPICUDA, "")); 637f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)y, &yiscuda, VECSEQCUDA, VECMPICUDA, "")); 638f17f7ee2SSatish Balay PetscCall(MatH2OpusUpdateIfNeeded(A, !xiscuda || !yiscuda)); 639f17f7ee2SSatish Balay PetscCall(MatMultKernel_H2OPUS(A, x, 0.0, y, PETSC_FALSE)); 640f17f7ee2SSatish Balay PetscFunctionReturn(0); 641f17f7ee2SSatish Balay } 642f17f7ee2SSatish Balay 6439371c9d4SSatish Balay static PetscErrorCode MatMultTransposeAdd_H2OPUS(Mat A, Vec x, Vec y, Vec z) { 644f17f7ee2SSatish Balay PetscBool xiscuda, ziscuda; 645f17f7ee2SSatish Balay 646f17f7ee2SSatish Balay PetscFunctionBegin; 647f17f7ee2SSatish Balay PetscCall(VecCopy(y, z)); 648f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)x, &xiscuda, VECSEQCUDA, VECMPICUDA, "")); 649f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)z, &ziscuda, VECSEQCUDA, VECMPICUDA, "")); 650f17f7ee2SSatish Balay PetscCall(MatH2OpusUpdateIfNeeded(A, !xiscuda || !ziscuda)); 651f17f7ee2SSatish Balay PetscCall(MatMultKernel_H2OPUS(A, x, 1.0, z, PETSC_TRUE)); 652f17f7ee2SSatish Balay PetscFunctionReturn(0); 653f17f7ee2SSatish Balay } 654f17f7ee2SSatish Balay 6559371c9d4SSatish Balay static PetscErrorCode MatMultAdd_H2OPUS(Mat A, Vec x, Vec y, Vec z) { 656f17f7ee2SSatish Balay PetscBool xiscuda, ziscuda; 657f17f7ee2SSatish Balay 658f17f7ee2SSatish Balay PetscFunctionBegin; 659f17f7ee2SSatish Balay PetscCall(VecCopy(y, z)); 660f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)x, &xiscuda, VECSEQCUDA, VECMPICUDA, "")); 661f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)z, &ziscuda, VECSEQCUDA, VECMPICUDA, "")); 662f17f7ee2SSatish Balay PetscCall(MatH2OpusUpdateIfNeeded(A, !xiscuda || !ziscuda)); 663f17f7ee2SSatish Balay PetscCall(MatMultKernel_H2OPUS(A, x, 1.0, z, PETSC_FALSE)); 664f17f7ee2SSatish Balay PetscFunctionReturn(0); 665f17f7ee2SSatish Balay } 666f17f7ee2SSatish Balay 6679371c9d4SSatish Balay static PetscErrorCode MatScale_H2OPUS(Mat A, PetscScalar s) { 668f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 669f17f7ee2SSatish Balay 670f17f7ee2SSatish Balay PetscFunctionBegin; 671f17f7ee2SSatish Balay a->s *= s; 672f17f7ee2SSatish Balay PetscFunctionReturn(0); 673f17f7ee2SSatish Balay } 674f17f7ee2SSatish Balay 6759371c9d4SSatish Balay static PetscErrorCode MatSetFromOptions_H2OPUS(Mat A, PetscOptionItems *PetscOptionsObject) { 676f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 677f17f7ee2SSatish Balay 678f17f7ee2SSatish Balay PetscFunctionBegin; 679036e4bdcSSatish Balay PetscOptionsHeadBegin(PetscOptionsObject, "H2OPUS options"); 680f17f7ee2SSatish Balay PetscCall(PetscOptionsInt("-mat_h2opus_leafsize", "Leaf size of cluster tree", NULL, a->leafsize, &a->leafsize, NULL)); 681f17f7ee2SSatish Balay PetscCall(PetscOptionsReal("-mat_h2opus_eta", "Admissibility condition tolerance", NULL, a->eta, &a->eta, NULL)); 682f17f7ee2SSatish Balay PetscCall(PetscOptionsInt("-mat_h2opus_order", "Basis order for off-diagonal sampling when constructed from kernel", NULL, a->basisord, &a->basisord, NULL)); 683f17f7ee2SSatish Balay PetscCall(PetscOptionsInt("-mat_h2opus_maxrank", "Maximum rank when constructed from matvecs", NULL, a->max_rank, &a->max_rank, NULL)); 684f17f7ee2SSatish Balay PetscCall(PetscOptionsInt("-mat_h2opus_samples", "Maximum number of samples to be taken concurrently when constructing from matvecs", NULL, a->bs, &a->bs, NULL)); 685f17f7ee2SSatish Balay PetscCall(PetscOptionsInt("-mat_h2opus_normsamples", "Maximum bumber of samples to be when estimating norms", NULL, a->norm_max_samples, &a->norm_max_samples, NULL)); 686f17f7ee2SSatish Balay PetscCall(PetscOptionsReal("-mat_h2opus_rtol", "Relative tolerance for construction from sampling", NULL, a->rtol, &a->rtol, NULL)); 687f17f7ee2SSatish Balay PetscCall(PetscOptionsBool("-mat_h2opus_check", "Check error when constructing from sampling during MatAssemblyEnd()", NULL, a->check_construction, &a->check_construction, NULL)); 688f17f7ee2SSatish Balay PetscCall(PetscOptionsBool("-mat_h2opus_hara_verbose", "Verbose output from hara construction", NULL, a->hara_verbose, &a->hara_verbose, NULL)); 689036e4bdcSSatish Balay PetscCall(PetscOptionsBool("-mat_h2opus_resize", "Resize after compression", NULL, a->resize, &a->resize, NULL)); 690036e4bdcSSatish Balay PetscOptionsHeadEnd(); 691f17f7ee2SSatish Balay PetscFunctionReturn(0); 692f17f7ee2SSatish Balay } 693f17f7ee2SSatish Balay 694f17f7ee2SSatish Balay static PetscErrorCode MatH2OpusSetCoords_H2OPUS(Mat, PetscInt, const PetscReal[], PetscBool, MatH2OpusKernel, void *); 695f17f7ee2SSatish Balay 6969371c9d4SSatish Balay static PetscErrorCode MatH2OpusInferCoordinates_Private(Mat A) { 697f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 698f17f7ee2SSatish Balay Vec c; 699f17f7ee2SSatish Balay PetscInt spacedim; 700f17f7ee2SSatish Balay const PetscScalar *coords; 701f17f7ee2SSatish Balay 702f17f7ee2SSatish Balay PetscFunctionBegin; 703f17f7ee2SSatish Balay if (a->ptcloud) PetscFunctionReturn(0); 704f17f7ee2SSatish Balay PetscCall(PetscObjectQuery((PetscObject)A, "__math2opus_coords", (PetscObject *)&c)); 705f17f7ee2SSatish Balay if (!c && a->sampler) { 706f17f7ee2SSatish Balay Mat S = a->sampler->GetSamplingMat(); 707f17f7ee2SSatish Balay 708f17f7ee2SSatish Balay PetscCall(PetscObjectQuery((PetscObject)S, "__math2opus_coords", (PetscObject *)&c)); 709f17f7ee2SSatish Balay } 710f17f7ee2SSatish Balay if (!c) { 711f17f7ee2SSatish Balay PetscCall(MatH2OpusSetCoords_H2OPUS(A, -1, NULL, PETSC_FALSE, NULL, NULL)); 712f17f7ee2SSatish Balay } else { 713f17f7ee2SSatish Balay PetscCall(VecGetArrayRead(c, &coords)); 714f17f7ee2SSatish Balay PetscCall(VecGetBlockSize(c, &spacedim)); 715f17f7ee2SSatish Balay PetscCall(MatH2OpusSetCoords_H2OPUS(A, spacedim, coords, PETSC_FALSE, NULL, NULL)); 716f17f7ee2SSatish Balay PetscCall(VecRestoreArrayRead(c, &coords)); 717f17f7ee2SSatish Balay } 718f17f7ee2SSatish Balay PetscFunctionReturn(0); 719f17f7ee2SSatish Balay } 720f17f7ee2SSatish Balay 7219371c9d4SSatish Balay static PetscErrorCode MatSetUpMultiply_H2OPUS(Mat A) { 722f17f7ee2SSatish Balay MPI_Comm comm; 723f17f7ee2SSatish Balay PetscMPIInt size; 724f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 725f17f7ee2SSatish Balay PetscInt n = 0, *idx = NULL; 726f17f7ee2SSatish Balay int *iidx = NULL; 727f17f7ee2SSatish Balay PetscCopyMode own; 728f17f7ee2SSatish Balay PetscBool rid; 729f17f7ee2SSatish Balay 730f17f7ee2SSatish Balay PetscFunctionBegin; 731f17f7ee2SSatish Balay if (a->multsetup) PetscFunctionReturn(0); 732f17f7ee2SSatish Balay if (a->sf) { /* MatDuplicate_H2OPUS takes reference to the SF */ 733f17f7ee2SSatish Balay PetscCall(PetscSFGetGraph(a->sf, NULL, &n, NULL, NULL)); 734f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 735f17f7ee2SSatish Balay a->xx_gpu = new thrust::device_vector<PetscScalar>(n); 736f17f7ee2SSatish Balay a->yy_gpu = new thrust::device_vector<PetscScalar>(n); 737f17f7ee2SSatish Balay a->xxs_gpu = 1; 738f17f7ee2SSatish Balay a->yys_gpu = 1; 739f17f7ee2SSatish Balay #endif 740f17f7ee2SSatish Balay a->xx = new thrust::host_vector<PetscScalar>(n); 741f17f7ee2SSatish Balay a->yy = new thrust::host_vector<PetscScalar>(n); 742f17f7ee2SSatish Balay a->xxs = 1; 743f17f7ee2SSatish Balay a->yys = 1; 744f17f7ee2SSatish Balay } else { 745f17f7ee2SSatish Balay IS is; 746f17f7ee2SSatish Balay PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 747f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(comm, &size)); 748f17f7ee2SSatish Balay if (!a->h2opus_indexmap) { 749f17f7ee2SSatish Balay if (size > 1) { 750f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed CPU matrix"); 751f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 752f17f7ee2SSatish Balay iidx = MatH2OpusGetThrustPointer(a->dist_hmatrix->basis_tree.basis_branch.index_map); 753f17f7ee2SSatish Balay n = a->dist_hmatrix->basis_tree.basis_branch.index_map.size(); 754f17f7ee2SSatish Balay #endif 755f17f7ee2SSatish Balay } else { 756f17f7ee2SSatish Balay iidx = MatH2OpusGetThrustPointer(a->hmatrix->u_basis_tree.index_map); 757f17f7ee2SSatish Balay n = a->hmatrix->u_basis_tree.index_map.size(); 758f17f7ee2SSatish Balay } 759f17f7ee2SSatish Balay 760f17f7ee2SSatish Balay if (PetscDefined(USE_64BIT_INDICES)) { 761f17f7ee2SSatish Balay PetscInt i; 762f17f7ee2SSatish Balay 763f17f7ee2SSatish Balay own = PETSC_OWN_POINTER; 764f17f7ee2SSatish Balay PetscCall(PetscMalloc1(n, &idx)); 765f17f7ee2SSatish Balay for (i = 0; i < n; i++) idx[i] = iidx[i]; 766f17f7ee2SSatish Balay } else { 767f17f7ee2SSatish Balay own = PETSC_COPY_VALUES; 768f17f7ee2SSatish Balay idx = (PetscInt *)iidx; 769f17f7ee2SSatish Balay } 770f17f7ee2SSatish Balay PetscCall(ISCreateGeneral(comm, n, idx, own, &is)); 771f17f7ee2SSatish Balay PetscCall(ISSetPermutation(is)); 772f17f7ee2SSatish Balay PetscCall(ISViewFromOptions(is, (PetscObject)A, "-mat_h2opus_indexmap_view")); 773f17f7ee2SSatish Balay a->h2opus_indexmap = is; 774f17f7ee2SSatish Balay } 775f17f7ee2SSatish Balay PetscCall(ISGetLocalSize(a->h2opus_indexmap, &n)); 776f17f7ee2SSatish Balay PetscCall(ISGetIndices(a->h2opus_indexmap, (const PetscInt **)&idx)); 777f17f7ee2SSatish Balay rid = (PetscBool)(n == A->rmap->n); 778f17f7ee2SSatish Balay PetscCall(MPIU_Allreduce(MPI_IN_PLACE, &rid, 1, MPIU_BOOL, MPI_LAND, comm)); 77948a46eb9SPierre Jolivet if (rid) PetscCall(ISIdentity(a->h2opus_indexmap, &rid)); 780f17f7ee2SSatish Balay if (!rid) { 781f17f7ee2SSatish Balay if (size > 1) { /* Parallel distribution may be different, save it here for fast path in MatMult (see MatH2OpusSetNativeMult) */ 782f17f7ee2SSatish Balay PetscCall(PetscLayoutCreate(comm, &a->h2opus_rmap)); 783f17f7ee2SSatish Balay PetscCall(PetscLayoutSetLocalSize(a->h2opus_rmap, n)); 784f17f7ee2SSatish Balay PetscCall(PetscLayoutSetUp(a->h2opus_rmap)); 785f17f7ee2SSatish Balay PetscCall(PetscLayoutReference(a->h2opus_rmap, &a->h2opus_cmap)); 786f17f7ee2SSatish Balay } 787f17f7ee2SSatish Balay PetscCall(PetscSFCreate(comm, &a->sf)); 788f17f7ee2SSatish Balay PetscCall(PetscSFSetGraphLayout(a->sf, A->rmap, n, NULL, PETSC_OWN_POINTER, idx)); 789036e4bdcSSatish Balay PetscCall(PetscSFSetUp(a->sf)); 790f17f7ee2SSatish Balay PetscCall(PetscSFViewFromOptions(a->sf, (PetscObject)A, "-mat_h2opus_sf_view")); 791f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 792f17f7ee2SSatish Balay a->xx_gpu = new thrust::device_vector<PetscScalar>(n); 793f17f7ee2SSatish Balay a->yy_gpu = new thrust::device_vector<PetscScalar>(n); 794f17f7ee2SSatish Balay a->xxs_gpu = 1; 795f17f7ee2SSatish Balay a->yys_gpu = 1; 796f17f7ee2SSatish Balay #endif 797f17f7ee2SSatish Balay a->xx = new thrust::host_vector<PetscScalar>(n); 798f17f7ee2SSatish Balay a->yy = new thrust::host_vector<PetscScalar>(n); 799f17f7ee2SSatish Balay a->xxs = 1; 800f17f7ee2SSatish Balay a->yys = 1; 801f17f7ee2SSatish Balay } 802f17f7ee2SSatish Balay PetscCall(ISRestoreIndices(a->h2opus_indexmap, (const PetscInt **)&idx)); 803f17f7ee2SSatish Balay } 804f17f7ee2SSatish Balay a->multsetup = PETSC_TRUE; 805f17f7ee2SSatish Balay PetscFunctionReturn(0); 806f17f7ee2SSatish Balay } 807f17f7ee2SSatish Balay 8089371c9d4SSatish Balay static PetscErrorCode MatAssemblyEnd_H2OPUS(Mat A, MatAssemblyType assemblytype) { 809f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 810f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 811f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle->handle; 812f17f7ee2SSatish Balay #else 813f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle; 814f17f7ee2SSatish Balay #endif 815f17f7ee2SSatish Balay PetscBool kernel = PETSC_FALSE; 816f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 817f17f7ee2SSatish Balay PetscBool samplingdone = PETSC_FALSE; 818f17f7ee2SSatish Balay MPI_Comm comm; 819f17f7ee2SSatish Balay PetscMPIInt size; 820f17f7ee2SSatish Balay 821f17f7ee2SSatish Balay PetscFunctionBegin; 822f17f7ee2SSatish Balay PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 823036e4bdcSSatish Balay PetscCheck(A->rmap->n == A->cmap->n, PETSC_COMM_SELF, PETSC_ERR_SUP, "Different row and column local sizes are not supported"); 824036e4bdcSSatish Balay PetscCheck(A->rmap->N == A->cmap->N, comm, PETSC_ERR_SUP, "Rectangular matrices are not supported"); 825f17f7ee2SSatish Balay 826f17f7ee2SSatish Balay /* XXX */ 827f17f7ee2SSatish Balay a->leafsize = PetscMin(a->leafsize, PetscMin(A->rmap->N, A->cmap->N)); 828f17f7ee2SSatish Balay 829f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(comm, &size)); 830f17f7ee2SSatish Balay /* TODO REUSABILITY of geometric construction */ 831f17f7ee2SSatish Balay delete a->hmatrix; 832f17f7ee2SSatish Balay delete a->dist_hmatrix; 833f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 834f17f7ee2SSatish Balay delete a->hmatrix_gpu; 835f17f7ee2SSatish Balay delete a->dist_hmatrix_gpu; 836f17f7ee2SSatish Balay #endif 837f17f7ee2SSatish Balay a->orthogonal = PETSC_FALSE; 838f17f7ee2SSatish Balay 839f17f7ee2SSatish Balay /* TODO: other? */ 840f17f7ee2SSatish Balay H2OpusBoxCenterAdmissibility adm(a->eta); 841f17f7ee2SSatish Balay 842f17f7ee2SSatish Balay PetscCall(PetscLogEventBegin(MAT_H2Opus_Build, A, 0, 0, 0)); 843f17f7ee2SSatish Balay if (size > 1) { 844f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 845f17f7ee2SSatish Balay a->dist_hmatrix = new DistributedHMatrix(A->rmap->n /* ,A->symmetric */); 846f17f7ee2SSatish Balay #else 847f17f7ee2SSatish Balay a->dist_hmatrix = NULL; 848f17f7ee2SSatish Balay #endif 849b94d7dedSBarry Smith } else a->hmatrix = new HMatrix(A->rmap->n, A->symmetric == PETSC_BOOL3_TRUE); 850f17f7ee2SSatish Balay PetscCall(MatH2OpusInferCoordinates_Private(A)); 851f17f7ee2SSatish Balay PetscCheck(a->ptcloud, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing pointcloud"); 852f17f7ee2SSatish Balay if (a->kernel) { 853f17f7ee2SSatish Balay BoxEntryGen<PetscScalar, H2OPUS_HWTYPE_CPU, PetscFunctionGenerator<PetscScalar>> entry_gen(*a->kernel); 854f17f7ee2SSatish Balay if (size > 1) { 855f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed CPU matrix"); 856f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 857f17f7ee2SSatish Balay buildDistributedHMatrix(*a->dist_hmatrix, a->ptcloud, adm, entry_gen, a->leafsize, a->basisord, a->handle); 858f17f7ee2SSatish Balay #endif 859f17f7ee2SSatish Balay } else { 860f17f7ee2SSatish Balay buildHMatrix(*a->hmatrix, a->ptcloud, adm, entry_gen, a->leafsize, a->basisord); 861f17f7ee2SSatish Balay } 862f17f7ee2SSatish Balay kernel = PETSC_TRUE; 863f17f7ee2SSatish Balay } else { 864036e4bdcSSatish Balay PetscCheck(size <= 1, comm, PETSC_ERR_SUP, "Construction from sampling not supported in parallel"); 865f17f7ee2SSatish Balay buildHMatrixStructure(*a->hmatrix, a->ptcloud, a->leafsize, adm); 866f17f7ee2SSatish Balay } 867f17f7ee2SSatish Balay PetscCall(MatSetUpMultiply_H2OPUS(A)); 868f17f7ee2SSatish Balay 869f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 870f17f7ee2SSatish Balay boundtocpu = A->boundtocpu; 871f17f7ee2SSatish Balay if (!boundtocpu) { 872f17f7ee2SSatish Balay if (size > 1) { 873f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed CPU matrix"); 874f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 875f17f7ee2SSatish Balay a->dist_hmatrix_gpu = new DistributedHMatrix_GPU(*a->dist_hmatrix); 876f17f7ee2SSatish Balay #endif 877f17f7ee2SSatish Balay } else { 878f17f7ee2SSatish Balay a->hmatrix_gpu = new HMatrix_GPU(*a->hmatrix); 879f17f7ee2SSatish Balay } 880f17f7ee2SSatish Balay } 881f17f7ee2SSatish Balay #endif 882f17f7ee2SSatish Balay if (size == 1) { 883f17f7ee2SSatish Balay if (!kernel && a->sampler && a->sampler->GetSamplingMat()) { 884f17f7ee2SSatish Balay PetscReal Anorm; 885f17f7ee2SSatish Balay bool verbose; 886f17f7ee2SSatish Balay 887f17f7ee2SSatish Balay PetscCall(PetscOptionsGetBool(((PetscObject)A)->options, ((PetscObject)A)->prefix, "-mat_h2opus_hara_verbose", &a->hara_verbose, NULL)); 888f17f7ee2SSatish Balay verbose = a->hara_verbose; 889f17f7ee2SSatish Balay PetscCall(MatApproximateNorm_Private(a->sampler->GetSamplingMat(), NORM_2, a->norm_max_samples, &Anorm)); 890f17f7ee2SSatish Balay if (a->hara_verbose) PetscCall(PetscPrintf(PETSC_COMM_SELF, "Sampling uses max rank %d, tol %g (%g*%g), %s samples %d\n", a->max_rank, a->rtol * Anorm, a->rtol, Anorm, boundtocpu ? "CPU" : "GPU", a->bs)); 891ad540459SPierre Jolivet if (a->sf && !a->nativemult) a->sampler->SetIndexMap(a->hmatrix->u_basis_tree.index_map.size(), a->hmatrix->u_basis_tree.index_map.data()); 892f17f7ee2SSatish Balay a->sampler->SetStream(handle->getMainStream()); 893f17f7ee2SSatish Balay if (boundtocpu) { 894f17f7ee2SSatish Balay a->sampler->SetGPUSampling(false); 895f17f7ee2SSatish Balay hara(a->sampler, *a->hmatrix, a->max_rank, 10 /* TODO */, a->rtol * Anorm, a->bs, handle, verbose); 896f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 897f17f7ee2SSatish Balay } else { 898f17f7ee2SSatish Balay a->sampler->SetGPUSampling(true); 899f17f7ee2SSatish Balay hara(a->sampler, *a->hmatrix_gpu, a->max_rank, 10 /* TODO */, a->rtol * Anorm, a->bs, handle, verbose); 900f17f7ee2SSatish Balay #endif 901f17f7ee2SSatish Balay } 902f17f7ee2SSatish Balay samplingdone = PETSC_TRUE; 903f17f7ee2SSatish Balay } 904f17f7ee2SSatish Balay } 905f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 906f17f7ee2SSatish Balay if (!boundtocpu) { 907f17f7ee2SSatish Balay delete a->hmatrix; 908f17f7ee2SSatish Balay delete a->dist_hmatrix; 909f17f7ee2SSatish Balay a->hmatrix = NULL; 910f17f7ee2SSatish Balay a->dist_hmatrix = NULL; 911f17f7ee2SSatish Balay } 912f17f7ee2SSatish Balay A->offloadmask = boundtocpu ? PETSC_OFFLOAD_CPU : PETSC_OFFLOAD_GPU; 913f17f7ee2SSatish Balay #endif 914f17f7ee2SSatish Balay PetscCall(PetscLogEventEnd(MAT_H2Opus_Build, A, 0, 0, 0)); 915f17f7ee2SSatish Balay 916f17f7ee2SSatish Balay if (!a->s) a->s = 1.0; 917f17f7ee2SSatish Balay A->assembled = PETSC_TRUE; 918f17f7ee2SSatish Balay 919f17f7ee2SSatish Balay if (samplingdone) { 920f17f7ee2SSatish Balay PetscBool check = a->check_construction; 921f17f7ee2SSatish Balay PetscBool checke = PETSC_FALSE; 922f17f7ee2SSatish Balay 923f17f7ee2SSatish Balay PetscCall(PetscOptionsGetBool(((PetscObject)A)->options, ((PetscObject)A)->prefix, "-mat_h2opus_check", &check, NULL)); 924f17f7ee2SSatish Balay PetscCall(PetscOptionsGetBool(((PetscObject)A)->options, ((PetscObject)A)->prefix, "-mat_h2opus_check_explicit", &checke, NULL)); 925f17f7ee2SSatish Balay if (check) { 926f17f7ee2SSatish Balay Mat E, Ae; 927f17f7ee2SSatish Balay PetscReal n1, ni, n2; 928f17f7ee2SSatish Balay PetscReal n1A, niA, n2A; 929f17f7ee2SSatish Balay void (*normfunc)(void); 930f17f7ee2SSatish Balay 931f17f7ee2SSatish Balay Ae = a->sampler->GetSamplingMat(); 932f17f7ee2SSatish Balay PetscCall(MatConvert(A, MATSHELL, MAT_INITIAL_MATRIX, &E)); 933f17f7ee2SSatish Balay PetscCall(MatShellSetOperation(E, MATOP_NORM, (void (*)(void))MatNorm_H2OPUS)); 934f17f7ee2SSatish Balay PetscCall(MatAXPY(E, -1.0, Ae, DIFFERENT_NONZERO_PATTERN)); 935f17f7ee2SSatish Balay PetscCall(MatNorm(E, NORM_1, &n1)); 936f17f7ee2SSatish Balay PetscCall(MatNorm(E, NORM_INFINITY, &ni)); 937f17f7ee2SSatish Balay PetscCall(MatNorm(E, NORM_2, &n2)); 938f17f7ee2SSatish Balay if (checke) { 939f17f7ee2SSatish Balay Mat eA, eE, eAe; 940f17f7ee2SSatish Balay 941f17f7ee2SSatish Balay PetscCall(MatComputeOperator(A, MATAIJ, &eA)); 942f17f7ee2SSatish Balay PetscCall(MatComputeOperator(E, MATAIJ, &eE)); 943f17f7ee2SSatish Balay PetscCall(MatComputeOperator(Ae, MATAIJ, &eAe)); 944f17f7ee2SSatish Balay PetscCall(MatChop(eA, PETSC_SMALL)); 945f17f7ee2SSatish Balay PetscCall(MatChop(eE, PETSC_SMALL)); 946f17f7ee2SSatish Balay PetscCall(MatChop(eAe, PETSC_SMALL)); 947f17f7ee2SSatish Balay PetscCall(PetscObjectSetName((PetscObject)eA, "H2Mat")); 948f17f7ee2SSatish Balay PetscCall(MatView(eA, NULL)); 949f17f7ee2SSatish Balay PetscCall(PetscObjectSetName((PetscObject)eAe, "S")); 950f17f7ee2SSatish Balay PetscCall(MatView(eAe, NULL)); 951f17f7ee2SSatish Balay PetscCall(PetscObjectSetName((PetscObject)eE, "H2Mat - S")); 952f17f7ee2SSatish Balay PetscCall(MatView(eE, NULL)); 953f17f7ee2SSatish Balay PetscCall(MatDestroy(&eA)); 954f17f7ee2SSatish Balay PetscCall(MatDestroy(&eE)); 955f17f7ee2SSatish Balay PetscCall(MatDestroy(&eAe)); 956f17f7ee2SSatish Balay } 957f17f7ee2SSatish Balay 958f17f7ee2SSatish Balay PetscCall(MatGetOperation(Ae, MATOP_NORM, &normfunc)); 959f17f7ee2SSatish Balay PetscCall(MatSetOperation(Ae, MATOP_NORM, (void (*)(void))MatNorm_H2OPUS)); 960f17f7ee2SSatish Balay PetscCall(MatNorm(Ae, NORM_1, &n1A)); 961f17f7ee2SSatish Balay PetscCall(MatNorm(Ae, NORM_INFINITY, &niA)); 962f17f7ee2SSatish Balay PetscCall(MatNorm(Ae, NORM_2, &n2A)); 963f17f7ee2SSatish Balay n1A = PetscMax(n1A, PETSC_SMALL); 964f17f7ee2SSatish Balay n2A = PetscMax(n2A, PETSC_SMALL); 965f17f7ee2SSatish Balay niA = PetscMax(niA, PETSC_SMALL); 966f17f7ee2SSatish Balay PetscCall(MatSetOperation(Ae, MATOP_NORM, normfunc)); 967f17f7ee2SSatish Balay PetscCall(PetscPrintf(PetscObjectComm((PetscObject)A), "MATH2OPUS construction errors: NORM_1 %g, NORM_INFINITY %g, NORM_2 %g (%g %g %g)\n", (double)n1, (double)ni, (double)n2, (double)(n1 / n1A), (double)(ni / niA), (double)(n2 / n2A))); 968f17f7ee2SSatish Balay PetscCall(MatDestroy(&E)); 969f17f7ee2SSatish Balay } 970f17f7ee2SSatish Balay a->sampler->SetSamplingMat(NULL); 971f17f7ee2SSatish Balay } 972f17f7ee2SSatish Balay PetscFunctionReturn(0); 973f17f7ee2SSatish Balay } 974f17f7ee2SSatish Balay 9759371c9d4SSatish Balay static PetscErrorCode MatZeroEntries_H2OPUS(Mat A) { 976f17f7ee2SSatish Balay PetscMPIInt size; 977f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 978f17f7ee2SSatish Balay 979f17f7ee2SSatish Balay PetscFunctionBegin; 980f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 981036e4bdcSSatish Balay PetscCheck(size <= 1, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not yet supported"); 982f17f7ee2SSatish Balay a->hmatrix->clearData(); 983f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 984f17f7ee2SSatish Balay if (a->hmatrix_gpu) a->hmatrix_gpu->clearData(); 985f17f7ee2SSatish Balay #endif 986f17f7ee2SSatish Balay PetscFunctionReturn(0); 987f17f7ee2SSatish Balay } 988f17f7ee2SSatish Balay 9899371c9d4SSatish Balay static PetscErrorCode MatDuplicate_H2OPUS(Mat B, MatDuplicateOption op, Mat *nA) { 990f17f7ee2SSatish Balay Mat A; 991f17f7ee2SSatish Balay Mat_H2OPUS *a, *b = (Mat_H2OPUS *)B->data; 992f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 993f17f7ee2SSatish Balay PetscBool iscpu = PETSC_FALSE; 994f17f7ee2SSatish Balay #else 995f17f7ee2SSatish Balay PetscBool iscpu = PETSC_TRUE; 996f17f7ee2SSatish Balay #endif 997f17f7ee2SSatish Balay MPI_Comm comm; 998f17f7ee2SSatish Balay 999f17f7ee2SSatish Balay PetscFunctionBegin; 1000f17f7ee2SSatish Balay PetscCall(PetscObjectGetComm((PetscObject)B, &comm)); 1001f17f7ee2SSatish Balay PetscCall(MatCreate(comm, &A)); 1002f17f7ee2SSatish Balay PetscCall(MatSetSizes(A, B->rmap->n, B->cmap->n, B->rmap->N, B->cmap->N)); 1003f17f7ee2SSatish Balay PetscCall(MatSetType(A, MATH2OPUS)); 1004f17f7ee2SSatish Balay PetscCall(MatPropagateSymmetryOptions(B, A)); 1005f17f7ee2SSatish Balay a = (Mat_H2OPUS *)A->data; 1006f17f7ee2SSatish Balay 1007f17f7ee2SSatish Balay a->eta = b->eta; 1008f17f7ee2SSatish Balay a->leafsize = b->leafsize; 1009f17f7ee2SSatish Balay a->basisord = b->basisord; 1010f17f7ee2SSatish Balay a->max_rank = b->max_rank; 1011f17f7ee2SSatish Balay a->bs = b->bs; 1012f17f7ee2SSatish Balay a->rtol = b->rtol; 1013f17f7ee2SSatish Balay a->norm_max_samples = b->norm_max_samples; 1014f17f7ee2SSatish Balay if (op == MAT_COPY_VALUES) a->s = b->s; 1015f17f7ee2SSatish Balay 1016f17f7ee2SSatish Balay a->ptcloud = new PetscPointCloud<PetscReal>(*b->ptcloud); 1017f17f7ee2SSatish Balay if (op == MAT_COPY_VALUES && b->kernel) a->kernel = new PetscFunctionGenerator<PetscScalar>(*b->kernel); 1018f17f7ee2SSatish Balay 1019f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1020ad540459SPierre Jolivet if (b->dist_hmatrix) a->dist_hmatrix = new DistributedHMatrix(*b->dist_hmatrix); 1021f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1022ad540459SPierre Jolivet if (b->dist_hmatrix_gpu) a->dist_hmatrix_gpu = new DistributedHMatrix_GPU(*b->dist_hmatrix_gpu); 1023f17f7ee2SSatish Balay #endif 1024f17f7ee2SSatish Balay #endif 1025f17f7ee2SSatish Balay if (b->hmatrix) { 1026f17f7ee2SSatish Balay a->hmatrix = new HMatrix(*b->hmatrix); 1027f17f7ee2SSatish Balay if (op == MAT_DO_NOT_COPY_VALUES) a->hmatrix->clearData(); 1028f17f7ee2SSatish Balay } 1029f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1030f17f7ee2SSatish Balay if (b->hmatrix_gpu) { 1031f17f7ee2SSatish Balay a->hmatrix_gpu = new HMatrix_GPU(*b->hmatrix_gpu); 1032f17f7ee2SSatish Balay if (op == MAT_DO_NOT_COPY_VALUES) a->hmatrix_gpu->clearData(); 1033f17f7ee2SSatish Balay } 1034f17f7ee2SSatish Balay #endif 1035f17f7ee2SSatish Balay if (b->sf) { 1036f17f7ee2SSatish Balay PetscCall(PetscObjectReference((PetscObject)b->sf)); 1037f17f7ee2SSatish Balay a->sf = b->sf; 1038f17f7ee2SSatish Balay } 1039f17f7ee2SSatish Balay if (b->h2opus_indexmap) { 1040f17f7ee2SSatish Balay PetscCall(PetscObjectReference((PetscObject)b->h2opus_indexmap)); 1041f17f7ee2SSatish Balay a->h2opus_indexmap = b->h2opus_indexmap; 1042f17f7ee2SSatish Balay } 1043f17f7ee2SSatish Balay 1044f17f7ee2SSatish Balay PetscCall(MatSetUp(A)); 1045f17f7ee2SSatish Balay PetscCall(MatSetUpMultiply_H2OPUS(A)); 1046f17f7ee2SSatish Balay if (op == MAT_COPY_VALUES) { 1047f17f7ee2SSatish Balay A->assembled = PETSC_TRUE; 1048f17f7ee2SSatish Balay a->orthogonal = b->orthogonal; 1049f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1050f17f7ee2SSatish Balay A->offloadmask = B->offloadmask; 1051f17f7ee2SSatish Balay #endif 1052f17f7ee2SSatish Balay } 1053f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1054f17f7ee2SSatish Balay iscpu = B->boundtocpu; 1055f17f7ee2SSatish Balay #endif 1056f17f7ee2SSatish Balay PetscCall(MatBindToCPU(A, iscpu)); 1057f17f7ee2SSatish Balay 1058f17f7ee2SSatish Balay *nA = A; 1059f17f7ee2SSatish Balay PetscFunctionReturn(0); 1060f17f7ee2SSatish Balay } 1061f17f7ee2SSatish Balay 10629371c9d4SSatish Balay static PetscErrorCode MatView_H2OPUS(Mat A, PetscViewer view) { 1063f17f7ee2SSatish Balay Mat_H2OPUS *h2opus = (Mat_H2OPUS *)A->data; 1064036e4bdcSSatish Balay PetscBool isascii, vieweps; 1065f17f7ee2SSatish Balay PetscMPIInt size; 1066f17f7ee2SSatish Balay PetscViewerFormat format; 1067f17f7ee2SSatish Balay 1068f17f7ee2SSatish Balay PetscFunctionBegin; 1069f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)view, PETSCVIEWERASCII, &isascii)); 1070f17f7ee2SSatish Balay PetscCall(PetscViewerGetFormat(view, &format)); 1071f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1072f17f7ee2SSatish Balay if (isascii) { 1073f17f7ee2SSatish Balay if (format == PETSC_VIEWER_ASCII_MATLAB) { 1074f17f7ee2SSatish Balay if (size == 1) { 1075f17f7ee2SSatish Balay FILE *fp; 1076f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIGetPointer(view, &fp)); 1077f17f7ee2SSatish Balay dumpHMatrix(*h2opus->hmatrix, 6, fp); 1078f17f7ee2SSatish Balay } 1079f17f7ee2SSatish Balay } else { 1080f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " H-Matrix constructed from %s\n", h2opus->kernel ? "Kernel" : "Mat")); 1081f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " PointCloud dim %" PetscInt_FMT "\n", h2opus->ptcloud ? h2opus->ptcloud->getDimension() : 0)); 1082f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Admissibility parameters: leaf size %" PetscInt_FMT ", eta %g\n", h2opus->leafsize, (double)h2opus->eta)); 1083f17f7ee2SSatish Balay if (!h2opus->kernel) { 1084f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Sampling parameters: max_rank %" PetscInt_FMT ", samples %" PetscInt_FMT ", tolerance %g\n", h2opus->max_rank, h2opus->bs, (double)h2opus->rtol)); 1085f17f7ee2SSatish Balay } else { 1086f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Offdiagonal blocks approximation order %" PetscInt_FMT "\n", h2opus->basisord)); 1087f17f7ee2SSatish Balay } 1088f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Number of samples for norms %" PetscInt_FMT "\n", h2opus->norm_max_samples)); 1089f17f7ee2SSatish Balay if (size == 1) { 1090f17f7ee2SSatish Balay double dense_mem_cpu = h2opus->hmatrix ? h2opus->hmatrix->getDenseMemoryUsage() : 0; 1091f17f7ee2SSatish Balay double low_rank_cpu = h2opus->hmatrix ? h2opus->hmatrix->getLowRankMemoryUsage() : 0; 1092f17f7ee2SSatish Balay #if defined(PETSC_HAVE_CUDA) 1093f17f7ee2SSatish Balay double dense_mem_gpu = h2opus->hmatrix_gpu ? h2opus->hmatrix_gpu->getDenseMemoryUsage() : 0; 1094f17f7ee2SSatish Balay double low_rank_gpu = h2opus->hmatrix_gpu ? h2opus->hmatrix_gpu->getLowRankMemoryUsage() : 0; 1095f17f7ee2SSatish Balay #endif 1096f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Memory consumption GB (CPU): %g (dense) %g (low rank) %g (total)\n", dense_mem_cpu, low_rank_cpu, low_rank_cpu + dense_mem_cpu)); 1097f17f7ee2SSatish Balay #if defined(PETSC_HAVE_CUDA) 1098f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Memory consumption GB (GPU): %g (dense) %g (low rank) %g (total)\n", dense_mem_gpu, low_rank_gpu, low_rank_gpu + dense_mem_gpu)); 1099f17f7ee2SSatish Balay #endif 1100f17f7ee2SSatish Balay } else { 1101f17f7ee2SSatish Balay #if defined(PETSC_HAVE_CUDA) 1102f17f7ee2SSatish Balay double matrix_mem[4] = {0., 0., 0., 0.}; 1103f17f7ee2SSatish Balay PetscMPIInt rsize = 4; 1104f17f7ee2SSatish Balay #else 1105f17f7ee2SSatish Balay double matrix_mem[2] = {0., 0.}; 1106f17f7ee2SSatish Balay PetscMPIInt rsize = 2; 1107f17f7ee2SSatish Balay #endif 1108f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1109f17f7ee2SSatish Balay matrix_mem[0] = h2opus->dist_hmatrix ? h2opus->dist_hmatrix->getLocalDenseMemoryUsage() : 0; 1110f17f7ee2SSatish Balay matrix_mem[1] = h2opus->dist_hmatrix ? h2opus->dist_hmatrix->getLocalLowRankMemoryUsage() : 0; 1111f17f7ee2SSatish Balay #if defined(PETSC_HAVE_CUDA) 1112f17f7ee2SSatish Balay matrix_mem[2] = h2opus->dist_hmatrix_gpu ? h2opus->dist_hmatrix_gpu->getLocalDenseMemoryUsage() : 0; 1113f17f7ee2SSatish Balay matrix_mem[3] = h2opus->dist_hmatrix_gpu ? h2opus->dist_hmatrix_gpu->getLocalLowRankMemoryUsage() : 0; 1114f17f7ee2SSatish Balay #endif 1115f17f7ee2SSatish Balay #endif 1116f17f7ee2SSatish Balay PetscCall(MPIU_Allreduce(MPI_IN_PLACE, matrix_mem, rsize, MPI_DOUBLE_PRECISION, MPI_SUM, PetscObjectComm((PetscObject)A))); 1117f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Memory consumption GB (CPU): %g (dense) %g (low rank) %g (total)\n", matrix_mem[0], matrix_mem[1], matrix_mem[0] + matrix_mem[1])); 1118f17f7ee2SSatish Balay #if defined(PETSC_HAVE_CUDA) 1119f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Memory consumption GB (GPU): %g (dense) %g (low rank) %g (total)\n", matrix_mem[2], matrix_mem[3], matrix_mem[2] + matrix_mem[3])); 1120f17f7ee2SSatish Balay #endif 1121f17f7ee2SSatish Balay } 1122f17f7ee2SSatish Balay } 1123f17f7ee2SSatish Balay } 1124036e4bdcSSatish Balay vieweps = PETSC_FALSE; 1125036e4bdcSSatish Balay PetscCall(PetscOptionsGetBool(((PetscObject)A)->options, ((PetscObject)A)->prefix, "-mat_h2opus_vieweps", &vieweps, NULL)); 1126036e4bdcSSatish Balay if (vieweps) { 1127f17f7ee2SSatish Balay char filename[256]; 1128f17f7ee2SSatish Balay const char *name; 1129f17f7ee2SSatish Balay 1130f17f7ee2SSatish Balay PetscCall(PetscObjectGetName((PetscObject)A, &name)); 1131f17f7ee2SSatish Balay PetscCall(PetscSNPrintf(filename, sizeof(filename), "%s_structure.eps", name)); 1132036e4bdcSSatish Balay PetscCall(PetscOptionsGetString(((PetscObject)A)->options, ((PetscObject)A)->prefix, "-mat_h2opus_vieweps_filename", filename, sizeof(filename), NULL)); 1133f17f7ee2SSatish Balay outputEps(*h2opus->hmatrix, filename); 1134f17f7ee2SSatish Balay } 1135f17f7ee2SSatish Balay PetscFunctionReturn(0); 1136f17f7ee2SSatish Balay } 1137f17f7ee2SSatish Balay 11389371c9d4SSatish Balay static PetscErrorCode MatH2OpusSetCoords_H2OPUS(Mat A, PetscInt spacedim, const PetscReal coords[], PetscBool cdist, MatH2OpusKernel kernel, void *kernelctx) { 1139f17f7ee2SSatish Balay Mat_H2OPUS *h2opus = (Mat_H2OPUS *)A->data; 1140f17f7ee2SSatish Balay PetscReal *gcoords; 1141f17f7ee2SSatish Balay PetscInt N; 1142f17f7ee2SSatish Balay MPI_Comm comm; 1143f17f7ee2SSatish Balay PetscMPIInt size; 1144f17f7ee2SSatish Balay PetscBool cong; 1145f17f7ee2SSatish Balay 1146f17f7ee2SSatish Balay PetscFunctionBegin; 1147f17f7ee2SSatish Balay PetscCall(PetscLayoutSetUp(A->rmap)); 1148f17f7ee2SSatish Balay PetscCall(PetscLayoutSetUp(A->cmap)); 1149f17f7ee2SSatish Balay PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 1150f17f7ee2SSatish Balay PetscCall(MatHasCongruentLayouts(A, &cong)); 1151f17f7ee2SSatish Balay PetscCheck(cong, comm, PETSC_ERR_SUP, "Only for square matrices with congruent layouts"); 1152f17f7ee2SSatish Balay N = A->rmap->N; 1153f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(comm, &size)); 1154f17f7ee2SSatish Balay if (spacedim > 0 && size > 1 && cdist) { 1155f17f7ee2SSatish Balay PetscSF sf; 1156f17f7ee2SSatish Balay MPI_Datatype dtype; 1157f17f7ee2SSatish Balay 1158f17f7ee2SSatish Balay PetscCallMPI(MPI_Type_contiguous(spacedim, MPIU_REAL, &dtype)); 1159f17f7ee2SSatish Balay PetscCallMPI(MPI_Type_commit(&dtype)); 1160f17f7ee2SSatish Balay 1161f17f7ee2SSatish Balay PetscCall(PetscSFCreate(comm, &sf)); 1162f17f7ee2SSatish Balay PetscCall(PetscSFSetGraphWithPattern(sf, A->rmap, PETSCSF_PATTERN_ALLGATHER)); 1163f17f7ee2SSatish Balay PetscCall(PetscMalloc1(spacedim * N, &gcoords)); 1164f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(sf, dtype, coords, gcoords, MPI_REPLACE)); 1165f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(sf, dtype, coords, gcoords, MPI_REPLACE)); 1166f17f7ee2SSatish Balay PetscCall(PetscSFDestroy(&sf)); 1167f17f7ee2SSatish Balay PetscCallMPI(MPI_Type_free(&dtype)); 1168f17f7ee2SSatish Balay } else gcoords = (PetscReal *)coords; 1169f17f7ee2SSatish Balay 1170f17f7ee2SSatish Balay delete h2opus->ptcloud; 1171f17f7ee2SSatish Balay delete h2opus->kernel; 1172f17f7ee2SSatish Balay h2opus->ptcloud = new PetscPointCloud<PetscReal>(spacedim, N, gcoords); 1173f17f7ee2SSatish Balay if (kernel) h2opus->kernel = new PetscFunctionGenerator<PetscScalar>(kernel, spacedim, kernelctx); 1174f17f7ee2SSatish Balay if (gcoords != coords) PetscCall(PetscFree(gcoords)); 1175f17f7ee2SSatish Balay A->preallocated = PETSC_TRUE; 1176f17f7ee2SSatish Balay PetscFunctionReturn(0); 1177f17f7ee2SSatish Balay } 1178f17f7ee2SSatish Balay 1179f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 11809371c9d4SSatish Balay static PetscErrorCode MatBindToCPU_H2OPUS(Mat A, PetscBool flg) { 1181f17f7ee2SSatish Balay PetscMPIInt size; 1182f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1183f17f7ee2SSatish Balay 1184f17f7ee2SSatish Balay PetscFunctionBegin; 1185f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1186f17f7ee2SSatish Balay if (flg && A->offloadmask == PETSC_OFFLOAD_GPU) { 1187f17f7ee2SSatish Balay if (size > 1) { 1188f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1189f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1190f17f7ee2SSatish Balay if (!a->dist_hmatrix) a->dist_hmatrix = new DistributedHMatrix(*a->dist_hmatrix_gpu); 1191f17f7ee2SSatish Balay else *a->dist_hmatrix = *a->dist_hmatrix_gpu; 1192f17f7ee2SSatish Balay #endif 1193f17f7ee2SSatish Balay } else { 1194f17f7ee2SSatish Balay PetscCheck(a->hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1195f17f7ee2SSatish Balay if (!a->hmatrix) a->hmatrix = new HMatrix(*a->hmatrix_gpu); 1196f17f7ee2SSatish Balay else *a->hmatrix = *a->hmatrix_gpu; 1197f17f7ee2SSatish Balay } 1198f17f7ee2SSatish Balay delete a->hmatrix_gpu; 1199f17f7ee2SSatish Balay delete a->dist_hmatrix_gpu; 1200f17f7ee2SSatish Balay a->hmatrix_gpu = NULL; 1201f17f7ee2SSatish Balay a->dist_hmatrix_gpu = NULL; 1202f17f7ee2SSatish Balay A->offloadmask = PETSC_OFFLOAD_CPU; 1203f17f7ee2SSatish Balay } else if (!flg && A->offloadmask == PETSC_OFFLOAD_CPU) { 1204f17f7ee2SSatish Balay if (size > 1) { 1205f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1206f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1207f17f7ee2SSatish Balay if (!a->dist_hmatrix_gpu) a->dist_hmatrix_gpu = new DistributedHMatrix_GPU(*a->dist_hmatrix); 1208f17f7ee2SSatish Balay else *a->dist_hmatrix_gpu = *a->dist_hmatrix; 1209f17f7ee2SSatish Balay #endif 1210f17f7ee2SSatish Balay } else { 1211f17f7ee2SSatish Balay PetscCheck(a->hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1212f17f7ee2SSatish Balay if (!a->hmatrix_gpu) a->hmatrix_gpu = new HMatrix_GPU(*a->hmatrix); 1213f17f7ee2SSatish Balay else *a->hmatrix_gpu = *a->hmatrix; 1214f17f7ee2SSatish Balay } 1215f17f7ee2SSatish Balay delete a->hmatrix; 1216f17f7ee2SSatish Balay delete a->dist_hmatrix; 1217f17f7ee2SSatish Balay a->hmatrix = NULL; 1218f17f7ee2SSatish Balay a->dist_hmatrix = NULL; 1219f17f7ee2SSatish Balay A->offloadmask = PETSC_OFFLOAD_GPU; 1220f17f7ee2SSatish Balay } 1221f17f7ee2SSatish Balay PetscCall(PetscFree(A->defaultvectype)); 1222f17f7ee2SSatish Balay if (!flg) { 1223f17f7ee2SSatish Balay PetscCall(PetscStrallocpy(VECCUDA, &A->defaultvectype)); 1224f17f7ee2SSatish Balay } else { 1225f17f7ee2SSatish Balay PetscCall(PetscStrallocpy(VECSTANDARD, &A->defaultvectype)); 1226f17f7ee2SSatish Balay } 1227f17f7ee2SSatish Balay A->boundtocpu = flg; 1228f17f7ee2SSatish Balay PetscFunctionReturn(0); 1229f17f7ee2SSatish Balay } 1230f17f7ee2SSatish Balay #endif 1231f17f7ee2SSatish Balay 1232f17f7ee2SSatish Balay /*MC 1233f17f7ee2SSatish Balay MATH2OPUS = "h2opus" - A matrix type for hierarchical matrices using the H2Opus package. 1234f17f7ee2SSatish Balay 1235f17f7ee2SSatish Balay Options Database Keys: 1236f17f7ee2SSatish Balay . -mat_type h2opus - matrix type to "h2opus" during a call to MatSetFromOptions() 1237f17f7ee2SSatish Balay 1238f17f7ee2SSatish Balay Notes: 123911a5261eSBarry Smith H2Opus implements hierarchical matrices in the H^2 flavour. It supports CPU or NVIDIA GPUs. 124011a5261eSBarry Smith 1241f17f7ee2SSatish Balay For CPU only builds, use ./configure --download-h2opus --download-thrust to install PETSc to use H2Opus. 1242f17f7ee2SSatish Balay In order to run on NVIDIA GPUs, use ./configure --download-h2opus --download-magma --download-kblas. 1243f17f7ee2SSatish Balay 1244f17f7ee2SSatish Balay Level: beginner 1245f17f7ee2SSatish Balay 124611a5261eSBarry Smith Reference: 124711a5261eSBarry Smith . * - "H2Opus: A distributed-memory multi-GPU software package for non-local operators", https://arxiv.org/abs/2109.05451 124811a5261eSBarry Smith 124911a5261eSBarry Smith .seealso: `MATH2OPUS`, `MATHTOOL`, `MATDENSE`, `MatCreateH2OpusFromKernel()`, `MatCreateH2OpusFromMat()` 1250f17f7ee2SSatish Balay M*/ 12519371c9d4SSatish Balay PETSC_EXTERN PetscErrorCode MatCreate_H2OPUS(Mat A) { 1252f17f7ee2SSatish Balay Mat_H2OPUS *a; 1253f17f7ee2SSatish Balay PetscMPIInt size; 1254f17f7ee2SSatish Balay 1255f17f7ee2SSatish Balay PetscFunctionBegin; 1256f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1257f17f7ee2SSatish Balay PetscCall(PetscDeviceInitialize(PETSC_DEVICE_CUDA)); 1258f17f7ee2SSatish Balay #endif 1259*4dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&a)); 1260f17f7ee2SSatish Balay A->data = (void *)a; 1261f17f7ee2SSatish Balay 1262f17f7ee2SSatish Balay a->eta = 0.9; 1263f17f7ee2SSatish Balay a->leafsize = 32; 1264f17f7ee2SSatish Balay a->basisord = 4; 1265f17f7ee2SSatish Balay a->max_rank = 64; 1266f17f7ee2SSatish Balay a->bs = 32; 1267f17f7ee2SSatish Balay a->rtol = 1.e-4; 1268f17f7ee2SSatish Balay a->s = 1.0; 1269f17f7ee2SSatish Balay a->norm_max_samples = 10; 1270036e4bdcSSatish Balay a->resize = PETSC_TRUE; /* reallocate after compression */ 1271f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1272f17f7ee2SSatish Balay h2opusCreateDistributedHandleComm(&a->handle, PetscObjectComm((PetscObject)A)); 1273f17f7ee2SSatish Balay #else 1274f17f7ee2SSatish Balay h2opusCreateHandle(&a->handle); 1275f17f7ee2SSatish Balay #endif 1276f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1277f17f7ee2SSatish Balay PetscCall(PetscObjectChangeTypeName((PetscObject)A, MATH2OPUS)); 1278f17f7ee2SSatish Balay PetscCall(PetscMemzero(A->ops, sizeof(struct _MatOps))); 1279f17f7ee2SSatish Balay 1280f17f7ee2SSatish Balay A->ops->destroy = MatDestroy_H2OPUS; 1281f17f7ee2SSatish Balay A->ops->view = MatView_H2OPUS; 1282f17f7ee2SSatish Balay A->ops->assemblyend = MatAssemblyEnd_H2OPUS; 1283f17f7ee2SSatish Balay A->ops->mult = MatMult_H2OPUS; 1284f17f7ee2SSatish Balay A->ops->multtranspose = MatMultTranspose_H2OPUS; 1285f17f7ee2SSatish Balay A->ops->multadd = MatMultAdd_H2OPUS; 1286f17f7ee2SSatish Balay A->ops->multtransposeadd = MatMultTransposeAdd_H2OPUS; 1287f17f7ee2SSatish Balay A->ops->scale = MatScale_H2OPUS; 1288f17f7ee2SSatish Balay A->ops->duplicate = MatDuplicate_H2OPUS; 1289f17f7ee2SSatish Balay A->ops->setfromoptions = MatSetFromOptions_H2OPUS; 1290f17f7ee2SSatish Balay A->ops->norm = MatNorm_H2OPUS; 1291f17f7ee2SSatish Balay A->ops->zeroentries = MatZeroEntries_H2OPUS; 1292f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1293f17f7ee2SSatish Balay A->ops->bindtocpu = MatBindToCPU_H2OPUS; 1294f17f7ee2SSatish Balay #endif 1295f17f7ee2SSatish Balay 1296f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_seqdense_C", MatProductSetFromOptions_H2OPUS)); 1297f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_seqdensecuda_C", MatProductSetFromOptions_H2OPUS)); 1298f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_mpidense_C", MatProductSetFromOptions_H2OPUS)); 1299f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_mpidensecuda_C", MatProductSetFromOptions_H2OPUS)); 1300f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1301f17f7ee2SSatish Balay PetscCall(PetscFree(A->defaultvectype)); 1302f17f7ee2SSatish Balay PetscCall(PetscStrallocpy(VECCUDA, &A->defaultvectype)); 1303f17f7ee2SSatish Balay #endif 1304f17f7ee2SSatish Balay PetscFunctionReturn(0); 1305f17f7ee2SSatish Balay } 1306f17f7ee2SSatish Balay 1307f17f7ee2SSatish Balay /*@C 1308f17f7ee2SSatish Balay MatH2OpusOrthogonalize - Orthogonalize the basis tree of a hierarchical matrix. 1309f17f7ee2SSatish Balay 1310f17f7ee2SSatish Balay Input Parameter: 1311f17f7ee2SSatish Balay . A - the matrix 1312f17f7ee2SSatish Balay 1313f17f7ee2SSatish Balay Level: intermediate 1314f17f7ee2SSatish Balay 1315036e4bdcSSatish Balay .seealso: `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()`, `MatCreateH2OpusFromKernel()`, `MatH2OpusCompress()` 1316f17f7ee2SSatish Balay @*/ 13179371c9d4SSatish Balay PetscErrorCode MatH2OpusOrthogonalize(Mat A) { 1318f17f7ee2SSatish Balay PetscBool ish2opus; 1319f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1320f17f7ee2SSatish Balay PetscMPIInt size; 1321f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 1322f17f7ee2SSatish Balay 1323f17f7ee2SSatish Balay PetscFunctionBegin; 1324f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 1325f17f7ee2SSatish Balay PetscValidType(A, 1); 1326f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 1327f17f7ee2SSatish Balay if (!ish2opus) PetscFunctionReturn(0); 1328f17f7ee2SSatish Balay if (a->orthogonal) PetscFunctionReturn(0); 1329f17f7ee2SSatish Balay HLibProfile::clear(); 1330f17f7ee2SSatish Balay PetscCall(PetscLogEventBegin(MAT_H2Opus_Orthog, A, 0, 0, 0)); 1331f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1332f17f7ee2SSatish Balay boundtocpu = A->boundtocpu; 1333f17f7ee2SSatish Balay #endif 1334f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1335f17f7ee2SSatish Balay if (size > 1) { 1336f17f7ee2SSatish Balay if (boundtocpu) { 1337f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1338f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1339f17f7ee2SSatish Balay distributed_horthog(*a->dist_hmatrix, a->handle); 1340f17f7ee2SSatish Balay #endif 1341f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1342f17f7ee2SSatish Balay A->offloadmask = PETSC_OFFLOAD_CPU; 1343f17f7ee2SSatish Balay } else { 1344f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1345f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeBegin()); 1346f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1347f17f7ee2SSatish Balay distributed_horthog(*a->dist_hmatrix_gpu, a->handle); 1348f17f7ee2SSatish Balay #endif 1349f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeEnd()); 1350f17f7ee2SSatish Balay #endif 1351f17f7ee2SSatish Balay } 1352f17f7ee2SSatish Balay } else { 1353f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1354f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle->handle; 1355f17f7ee2SSatish Balay #else 1356f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle; 1357f17f7ee2SSatish Balay #endif 1358f17f7ee2SSatish Balay if (boundtocpu) { 1359f17f7ee2SSatish Balay PetscCheck(a->hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1360f17f7ee2SSatish Balay horthog(*a->hmatrix, handle); 1361f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1362f17f7ee2SSatish Balay A->offloadmask = PETSC_OFFLOAD_CPU; 1363f17f7ee2SSatish Balay } else { 1364f17f7ee2SSatish Balay PetscCheck(a->hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1365f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeBegin()); 1366f17f7ee2SSatish Balay horthog(*a->hmatrix_gpu, handle); 1367f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeEnd()); 1368f17f7ee2SSatish Balay #endif 1369f17f7ee2SSatish Balay } 1370f17f7ee2SSatish Balay } 1371f17f7ee2SSatish Balay a->orthogonal = PETSC_TRUE; 1372f17f7ee2SSatish Balay { /* log flops */ 1373f17f7ee2SSatish Balay double gops, time, perf, dev; 1374f17f7ee2SSatish Balay HLibProfile::getHorthogPerf(gops, time, perf, dev); 1375f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1376f17f7ee2SSatish Balay if (boundtocpu) { 1377f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 1378f17f7ee2SSatish Balay } else { 1379f17f7ee2SSatish Balay PetscCall(PetscLogGpuFlops(1e9 * gops)); 1380f17f7ee2SSatish Balay } 1381f17f7ee2SSatish Balay #else 1382f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 1383f17f7ee2SSatish Balay #endif 1384f17f7ee2SSatish Balay } 1385f17f7ee2SSatish Balay PetscCall(PetscLogEventEnd(MAT_H2Opus_Orthog, A, 0, 0, 0)); 1386f17f7ee2SSatish Balay PetscFunctionReturn(0); 1387f17f7ee2SSatish Balay } 1388f17f7ee2SSatish Balay 1389f17f7ee2SSatish Balay /*@C 1390f17f7ee2SSatish Balay MatH2OpusCompress - Compress a hierarchical matrix. 1391f17f7ee2SSatish Balay 1392f17f7ee2SSatish Balay Input Parameters: 1393f17f7ee2SSatish Balay + A - the matrix 1394f17f7ee2SSatish Balay - tol - the absolute truncation threshold 1395f17f7ee2SSatish Balay 1396f17f7ee2SSatish Balay Level: intermediate 1397f17f7ee2SSatish Balay 1398036e4bdcSSatish Balay .seealso: `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()`, `MatCreateH2OpusFromKernel()`, `MatH2OpusOrthogonalize()` 1399f17f7ee2SSatish Balay @*/ 14009371c9d4SSatish Balay PetscErrorCode MatH2OpusCompress(Mat A, PetscReal tol) { 1401f17f7ee2SSatish Balay PetscBool ish2opus; 1402f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1403f17f7ee2SSatish Balay PetscMPIInt size; 1404f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 1405f17f7ee2SSatish Balay 1406f17f7ee2SSatish Balay PetscFunctionBegin; 1407f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 1408f17f7ee2SSatish Balay PetscValidType(A, 1); 1409f17f7ee2SSatish Balay PetscValidLogicalCollectiveReal(A, tol, 2); 1410f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 1411f17f7ee2SSatish Balay if (!ish2opus || tol <= 0.0) PetscFunctionReturn(0); 1412f17f7ee2SSatish Balay PetscCall(MatH2OpusOrthogonalize(A)); 1413f17f7ee2SSatish Balay HLibProfile::clear(); 1414f17f7ee2SSatish Balay PetscCall(PetscLogEventBegin(MAT_H2Opus_Compress, A, 0, 0, 0)); 1415f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1416f17f7ee2SSatish Balay boundtocpu = A->boundtocpu; 1417f17f7ee2SSatish Balay #endif 1418f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1419f17f7ee2SSatish Balay if (size > 1) { 1420f17f7ee2SSatish Balay if (boundtocpu) { 1421f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1422f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1423f17f7ee2SSatish Balay distributed_hcompress(*a->dist_hmatrix, tol, a->handle); 1424036e4bdcSSatish Balay if (a->resize) { 1425036e4bdcSSatish Balay DistributedHMatrix *dist_hmatrix = new DistributedHMatrix(*a->dist_hmatrix); 1426036e4bdcSSatish Balay delete a->dist_hmatrix; 1427036e4bdcSSatish Balay a->dist_hmatrix = dist_hmatrix; 1428036e4bdcSSatish Balay } 1429f17f7ee2SSatish Balay #endif 1430f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1431f17f7ee2SSatish Balay A->offloadmask = PETSC_OFFLOAD_CPU; 1432f17f7ee2SSatish Balay } else { 1433f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1434f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeBegin()); 1435f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1436f17f7ee2SSatish Balay distributed_hcompress(*a->dist_hmatrix_gpu, tol, a->handle); 1437036e4bdcSSatish Balay 1438036e4bdcSSatish Balay if (a->resize) { 1439036e4bdcSSatish Balay DistributedHMatrix_GPU *dist_hmatrix_gpu = new DistributedHMatrix_GPU(*a->dist_hmatrix_gpu); 1440036e4bdcSSatish Balay delete a->dist_hmatrix_gpu; 1441036e4bdcSSatish Balay a->dist_hmatrix_gpu = dist_hmatrix_gpu; 1442036e4bdcSSatish Balay } 1443f17f7ee2SSatish Balay #endif 1444f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeEnd()); 1445f17f7ee2SSatish Balay #endif 1446f17f7ee2SSatish Balay } 1447f17f7ee2SSatish Balay } else { 1448f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1449f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle->handle; 1450f17f7ee2SSatish Balay #else 1451f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle; 1452f17f7ee2SSatish Balay #endif 1453f17f7ee2SSatish Balay if (boundtocpu) { 1454f17f7ee2SSatish Balay PetscCheck(a->hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1455f17f7ee2SSatish Balay hcompress(*a->hmatrix, tol, handle); 1456036e4bdcSSatish Balay 1457036e4bdcSSatish Balay if (a->resize) { 1458036e4bdcSSatish Balay HMatrix *hmatrix = new HMatrix(*a->hmatrix); 1459036e4bdcSSatish Balay delete a->hmatrix; 1460036e4bdcSSatish Balay a->hmatrix = hmatrix; 1461036e4bdcSSatish Balay } 1462f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1463f17f7ee2SSatish Balay A->offloadmask = PETSC_OFFLOAD_CPU; 1464f17f7ee2SSatish Balay } else { 1465f17f7ee2SSatish Balay PetscCheck(a->hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1466f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeBegin()); 1467f17f7ee2SSatish Balay hcompress(*a->hmatrix_gpu, tol, handle); 1468f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeEnd()); 1469036e4bdcSSatish Balay 1470036e4bdcSSatish Balay if (a->resize) { 1471036e4bdcSSatish Balay HMatrix_GPU *hmatrix_gpu = new HMatrix_GPU(*a->hmatrix_gpu); 1472036e4bdcSSatish Balay delete a->hmatrix_gpu; 1473036e4bdcSSatish Balay a->hmatrix_gpu = hmatrix_gpu; 1474036e4bdcSSatish Balay } 1475f17f7ee2SSatish Balay #endif 1476f17f7ee2SSatish Balay } 1477f17f7ee2SSatish Balay } 1478f17f7ee2SSatish Balay { /* log flops */ 1479f17f7ee2SSatish Balay double gops, time, perf, dev; 1480f17f7ee2SSatish Balay HLibProfile::getHcompressPerf(gops, time, perf, dev); 1481f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1482f17f7ee2SSatish Balay if (boundtocpu) { 1483f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 1484f17f7ee2SSatish Balay } else { 1485f17f7ee2SSatish Balay PetscCall(PetscLogGpuFlops(1e9 * gops)); 1486f17f7ee2SSatish Balay } 1487f17f7ee2SSatish Balay #else 1488f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 1489f17f7ee2SSatish Balay #endif 1490f17f7ee2SSatish Balay } 1491f17f7ee2SSatish Balay PetscCall(PetscLogEventEnd(MAT_H2Opus_Compress, A, 0, 0, 0)); 1492f17f7ee2SSatish Balay PetscFunctionReturn(0); 1493f17f7ee2SSatish Balay } 1494f17f7ee2SSatish Balay 1495f17f7ee2SSatish Balay /*@C 1496f17f7ee2SSatish Balay MatH2OpusSetSamplingMat - Set a matrix to be sampled from matrix vector product to construct a hierarchical matrix. 1497f17f7ee2SSatish Balay 1498f17f7ee2SSatish Balay Input Parameters: 1499f17f7ee2SSatish Balay + A - the hierarchical matrix 1500f17f7ee2SSatish Balay . B - the matrix to be sampled 1501f17f7ee2SSatish Balay . bs - maximum number of samples to be taken concurrently 1502f17f7ee2SSatish Balay - tol - relative tolerance for construction 1503f17f7ee2SSatish Balay 150411a5261eSBarry Smith Notes: 150511a5261eSBarry Smith You need to call `MatAssemblyBegin()` and `MatAssemblyEnd()` to update the hierarchical matrix. 1506f17f7ee2SSatish Balay 1507f17f7ee2SSatish Balay Level: intermediate 1508f17f7ee2SSatish Balay 1509036e4bdcSSatish Balay .seealso: `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()`, `MatCreateH2OpusFromKernel()`, `MatH2OpusCompress()`, `MatH2OpusOrthogonalize()` 1510f17f7ee2SSatish Balay @*/ 15119371c9d4SSatish Balay PetscErrorCode MatH2OpusSetSamplingMat(Mat A, Mat B, PetscInt bs, PetscReal tol) { 1512f17f7ee2SSatish Balay PetscBool ish2opus; 1513f17f7ee2SSatish Balay 1514f17f7ee2SSatish Balay PetscFunctionBegin; 1515f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 1516f17f7ee2SSatish Balay PetscValidType(A, 1); 1517f17f7ee2SSatish Balay if (B) PetscValidHeaderSpecific(B, MAT_CLASSID, 2); 1518f17f7ee2SSatish Balay PetscValidLogicalCollectiveInt(A, bs, 3); 1519f17f7ee2SSatish Balay PetscValidLogicalCollectiveReal(A, tol, 3); 1520f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 1521f17f7ee2SSatish Balay if (ish2opus) { 1522f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1523f17f7ee2SSatish Balay 1524f17f7ee2SSatish Balay if (!a->sampler) a->sampler = new PetscMatrixSampler(); 1525f17f7ee2SSatish Balay a->sampler->SetSamplingMat(B); 1526f17f7ee2SSatish Balay if (bs > 0) a->bs = bs; 1527f17f7ee2SSatish Balay if (tol > 0.) a->rtol = tol; 1528f17f7ee2SSatish Balay delete a->kernel; 1529f17f7ee2SSatish Balay } 1530f17f7ee2SSatish Balay PetscFunctionReturn(0); 1531f17f7ee2SSatish Balay } 1532f17f7ee2SSatish Balay 1533f17f7ee2SSatish Balay /*@C 153411a5261eSBarry Smith MatCreateH2OpusFromKernel - Creates a `MATH2OPUS` from a user-supplied kernel. 1535f17f7ee2SSatish Balay 1536f17f7ee2SSatish Balay Input Parameters: 1537f17f7ee2SSatish Balay + comm - MPI communicator 153811a5261eSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if M is given) 153911a5261eSBarry Smith . n - number of local columns (or `PETSC_DECIDE` to have calculated if N is given) 154011a5261eSBarry Smith . M - number of global rows (or `PETSC_DETERMINE` to have calculated if m is given) 154111a5261eSBarry Smith . N - number of global columns (or `PETSC_DETERMINE` to have calculated if n is given) 1542f17f7ee2SSatish Balay . spacedim - dimension of the space coordinates 1543f17f7ee2SSatish Balay . coords - coordinates of the points 1544f17f7ee2SSatish Balay . cdist - whether or not coordinates are distributed 1545f17f7ee2SSatish Balay . kernel - computational kernel (or NULL) 1546f17f7ee2SSatish Balay . kernelctx - kernel context 1547f17f7ee2SSatish Balay . eta - admissibility condition tolerance 1548f17f7ee2SSatish Balay . leafsize - leaf size in cluster tree 1549f17f7ee2SSatish Balay - basisord - approximation order for Chebychev interpolation of low-rank blocks 1550f17f7ee2SSatish Balay 1551f17f7ee2SSatish Balay Output Parameter: 1552f17f7ee2SSatish Balay . nA - matrix 1553f17f7ee2SSatish Balay 1554f17f7ee2SSatish Balay Options Database Keys: 155511a5261eSBarry Smith + -mat_h2opus_leafsize <`PetscInt`> - Leaf size of cluster tree 155611a5261eSBarry Smith . -mat_h2opus_eta <`PetscReal`> - Admissibility condition tolerance 155711a5261eSBarry Smith . -mat_h2opus_order <`PetscInt`> - Chebychev approximation order 155811a5261eSBarry Smith - -mat_h2opus_normsamples <`PetscInt`> - Maximum number of samples to be used when estimating norms 1559f17f7ee2SSatish Balay 1560f17f7ee2SSatish Balay Level: intermediate 1561f17f7ee2SSatish Balay 1562036e4bdcSSatish Balay .seealso: `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()` 1563f17f7ee2SSatish Balay @*/ 15649371c9d4SSatish Balay PetscErrorCode MatCreateH2OpusFromKernel(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscInt spacedim, const PetscReal coords[], PetscBool cdist, MatH2OpusKernel kernel, void *kernelctx, PetscReal eta, PetscInt leafsize, PetscInt basisord, Mat *nA) { 1565f17f7ee2SSatish Balay Mat A; 1566f17f7ee2SSatish Balay Mat_H2OPUS *h2opus; 1567f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1568f17f7ee2SSatish Balay PetscBool iscpu = PETSC_FALSE; 1569f17f7ee2SSatish Balay #else 1570f17f7ee2SSatish Balay PetscBool iscpu = PETSC_TRUE; 1571f17f7ee2SSatish Balay #endif 1572f17f7ee2SSatish Balay 1573f17f7ee2SSatish Balay PetscFunctionBegin; 1574036e4bdcSSatish Balay PetscCheck(m == n, PETSC_COMM_SELF, PETSC_ERR_SUP, "Different row and column local sizes are not supported"); 1575f17f7ee2SSatish Balay PetscCall(MatCreate(comm, &A)); 1576f17f7ee2SSatish Balay PetscCall(MatSetSizes(A, m, n, M, N)); 1577036e4bdcSSatish Balay PetscCheck(M == N, comm, PETSC_ERR_SUP, "Rectangular matrices are not supported"); 1578f17f7ee2SSatish Balay PetscCall(MatSetType(A, MATH2OPUS)); 1579f17f7ee2SSatish Balay PetscCall(MatBindToCPU(A, iscpu)); 1580f17f7ee2SSatish Balay PetscCall(MatH2OpusSetCoords_H2OPUS(A, spacedim, coords, cdist, kernel, kernelctx)); 1581f17f7ee2SSatish Balay 1582f17f7ee2SSatish Balay h2opus = (Mat_H2OPUS *)A->data; 1583f17f7ee2SSatish Balay if (eta > 0.) h2opus->eta = eta; 1584f17f7ee2SSatish Balay if (leafsize > 0) h2opus->leafsize = leafsize; 1585f17f7ee2SSatish Balay if (basisord > 0) h2opus->basisord = basisord; 1586f17f7ee2SSatish Balay 1587f17f7ee2SSatish Balay *nA = A; 1588f17f7ee2SSatish Balay PetscFunctionReturn(0); 1589f17f7ee2SSatish Balay } 1590f17f7ee2SSatish Balay 1591f17f7ee2SSatish Balay /*@C 159211a5261eSBarry Smith MatCreateH2OpusFromMat - Creates a `MATH2OPUS` sampling from a user-supplied operator. 1593f17f7ee2SSatish Balay 1594f17f7ee2SSatish Balay Input Parameters: 1595f17f7ee2SSatish Balay + B - the matrix to be sampled 1596f17f7ee2SSatish Balay . spacedim - dimension of the space coordinates 1597f17f7ee2SSatish Balay . coords - coordinates of the points 1598f17f7ee2SSatish Balay . cdist - whether or not coordinates are distributed 1599f17f7ee2SSatish Balay . eta - admissibility condition tolerance 1600f17f7ee2SSatish Balay . leafsize - leaf size in cluster tree 1601f17f7ee2SSatish Balay . maxrank - maximum rank allowed 1602f17f7ee2SSatish Balay . bs - maximum number of samples to be taken concurrently 1603f17f7ee2SSatish Balay - rtol - relative tolerance for construction 1604f17f7ee2SSatish Balay 1605f17f7ee2SSatish Balay Output Parameter: 1606f17f7ee2SSatish Balay . nA - matrix 1607f17f7ee2SSatish Balay 1608f17f7ee2SSatish Balay Options Database Keys: 160911a5261eSBarry Smith + -mat_h2opus_leafsize <`PetscInt`> - Leaf size of cluster tree 161011a5261eSBarry Smith . -mat_h2opus_eta <`PetscReal`> - Admissibility condition tolerance 161111a5261eSBarry Smith . -mat_h2opus_maxrank <`PetscInt`> - Maximum rank when constructed from matvecs 161211a5261eSBarry Smith . -mat_h2opus_samples <`PetscInt`> - Maximum number of samples to be taken concurrently when constructing from matvecs 161311a5261eSBarry Smith . -mat_h2opus_rtol <`PetscReal`> - Relative tolerance for construction from sampling 161411a5261eSBarry Smith . -mat_h2opus_check <`PetscBool`> - Check error when constructing from sampling during MatAssemblyEnd() 161511a5261eSBarry Smith . -mat_h2opus_hara_verbose <`PetscBool`> - Verbose output from hara construction 161611a5261eSBarry Smith - -mat_h2opus_normsamples <`PetscInt`> - Maximum bumber of samples to be when estimating norms 1617f17f7ee2SSatish Balay 161811a5261eSBarry Smith Note: 161911a5261eSBarry Smith Not available in parallel 1620f17f7ee2SSatish Balay 1621f17f7ee2SSatish Balay Level: intermediate 1622f17f7ee2SSatish Balay 1623036e4bdcSSatish Balay .seealso: `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromKernel()` 1624f17f7ee2SSatish Balay @*/ 16259371c9d4SSatish Balay PetscErrorCode MatCreateH2OpusFromMat(Mat B, PetscInt spacedim, const PetscReal coords[], PetscBool cdist, PetscReal eta, PetscInt leafsize, PetscInt maxrank, PetscInt bs, PetscReal rtol, Mat *nA) { 1626f17f7ee2SSatish Balay Mat A; 1627f17f7ee2SSatish Balay Mat_H2OPUS *h2opus; 1628f17f7ee2SSatish Balay MPI_Comm comm; 1629f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 1630f17f7ee2SSatish Balay 1631f17f7ee2SSatish Balay PetscFunctionBegin; 1632f17f7ee2SSatish Balay PetscValidHeaderSpecific(B, MAT_CLASSID, 1); 1633f17f7ee2SSatish Balay PetscValidLogicalCollectiveInt(B, spacedim, 2); 1634f17f7ee2SSatish Balay PetscValidLogicalCollectiveBool(B, cdist, 4); 1635f17f7ee2SSatish Balay PetscValidLogicalCollectiveReal(B, eta, 5); 1636f17f7ee2SSatish Balay PetscValidLogicalCollectiveInt(B, leafsize, 6); 1637f17f7ee2SSatish Balay PetscValidLogicalCollectiveInt(B, maxrank, 7); 1638f17f7ee2SSatish Balay PetscValidLogicalCollectiveInt(B, bs, 8); 1639f17f7ee2SSatish Balay PetscValidLogicalCollectiveReal(B, rtol, 9); 1640f17f7ee2SSatish Balay PetscValidPointer(nA, 10); 1641f17f7ee2SSatish Balay PetscCall(PetscObjectGetComm((PetscObject)B, &comm)); 1642036e4bdcSSatish Balay PetscCheck(B->rmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_SUP, "Different row and column local sizes are not supported"); 1643036e4bdcSSatish Balay PetscCheck(B->rmap->N == B->cmap->N, comm, PETSC_ERR_SUP, "Rectangular matrices are not supported"); 1644f17f7ee2SSatish Balay PetscCall(MatCreate(comm, &A)); 1645f17f7ee2SSatish Balay PetscCall(MatSetSizes(A, B->rmap->n, B->cmap->n, B->rmap->N, B->cmap->N)); 1646f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1647f17f7ee2SSatish Balay { 1648f17f7ee2SSatish Balay PetscBool iscuda; 1649f17f7ee2SSatish Balay VecType vtype; 1650f17f7ee2SSatish Balay 1651f17f7ee2SSatish Balay PetscCall(MatGetVecType(B, &vtype)); 1652f17f7ee2SSatish Balay PetscCall(PetscStrcmp(vtype, VECCUDA, &iscuda)); 1653f17f7ee2SSatish Balay if (!iscuda) { 1654f17f7ee2SSatish Balay PetscCall(PetscStrcmp(vtype, VECSEQCUDA, &iscuda)); 165548a46eb9SPierre Jolivet if (!iscuda) PetscCall(PetscStrcmp(vtype, VECMPICUDA, &iscuda)); 1656f17f7ee2SSatish Balay } 1657f17f7ee2SSatish Balay if (iscuda && !B->boundtocpu) boundtocpu = PETSC_FALSE; 1658f17f7ee2SSatish Balay } 1659f17f7ee2SSatish Balay #endif 1660f17f7ee2SSatish Balay PetscCall(MatSetType(A, MATH2OPUS)); 1661f17f7ee2SSatish Balay PetscCall(MatBindToCPU(A, boundtocpu)); 166248a46eb9SPierre Jolivet if (spacedim) PetscCall(MatH2OpusSetCoords_H2OPUS(A, spacedim, coords, cdist, NULL, NULL)); 1663f17f7ee2SSatish Balay PetscCall(MatPropagateSymmetryOptions(B, A)); 1664f17f7ee2SSatish Balay /* PetscCheck(A->symmetric,comm,PETSC_ERR_SUP,"Unsymmetric sampling does not work"); */ 1665f17f7ee2SSatish Balay 1666f17f7ee2SSatish Balay h2opus = (Mat_H2OPUS *)A->data; 1667f17f7ee2SSatish Balay h2opus->sampler = new PetscMatrixSampler(B); 1668f17f7ee2SSatish Balay if (eta > 0.) h2opus->eta = eta; 1669f17f7ee2SSatish Balay if (leafsize > 0) h2opus->leafsize = leafsize; 1670f17f7ee2SSatish Balay if (maxrank > 0) h2opus->max_rank = maxrank; 1671f17f7ee2SSatish Balay if (bs > 0) h2opus->bs = bs; 1672f17f7ee2SSatish Balay if (rtol > 0.) h2opus->rtol = rtol; 1673f17f7ee2SSatish Balay *nA = A; 1674f17f7ee2SSatish Balay A->preallocated = PETSC_TRUE; 1675f17f7ee2SSatish Balay PetscFunctionReturn(0); 1676f17f7ee2SSatish Balay } 1677f17f7ee2SSatish Balay 1678f17f7ee2SSatish Balay /*@C 1679f17f7ee2SSatish Balay MatH2OpusGetIndexMap - Access reordering index set. 1680f17f7ee2SSatish Balay 1681f17f7ee2SSatish Balay Input Parameters: 1682f17f7ee2SSatish Balay . A - the matrix 1683f17f7ee2SSatish Balay 1684f17f7ee2SSatish Balay Output Parameter: 1685f17f7ee2SSatish Balay . indexmap - the index set for the reordering 1686f17f7ee2SSatish Balay 1687f17f7ee2SSatish Balay Level: intermediate 1688f17f7ee2SSatish Balay 1689036e4bdcSSatish Balay .seealso: `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()`, `MatCreateH2OpusFromKernel()` 1690f17f7ee2SSatish Balay @*/ 16919371c9d4SSatish Balay PetscErrorCode MatH2OpusGetIndexMap(Mat A, IS *indexmap) { 1692f17f7ee2SSatish Balay PetscBool ish2opus; 1693f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1694f17f7ee2SSatish Balay 1695f17f7ee2SSatish Balay PetscFunctionBegin; 1696f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 1697f17f7ee2SSatish Balay PetscValidType(A, 1); 1698f17f7ee2SSatish Balay PetscValidPointer(indexmap, 2); 1699f17f7ee2SSatish Balay PetscCheck(A->assembled, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix"); 1700f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 1701f17f7ee2SSatish Balay PetscCheck(ish2opus, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for type %s", ((PetscObject)A)->type_name); 1702f17f7ee2SSatish Balay *indexmap = a->h2opus_indexmap; 1703f17f7ee2SSatish Balay PetscFunctionReturn(0); 1704f17f7ee2SSatish Balay } 1705f17f7ee2SSatish Balay 1706f17f7ee2SSatish Balay /*@C 1707f17f7ee2SSatish Balay MatH2OpusMapVec - Maps a vector between PETSc and H2Opus ordering 1708f17f7ee2SSatish Balay 1709f17f7ee2SSatish Balay Input Parameters: 1710f17f7ee2SSatish Balay + A - the matrix 1711f17f7ee2SSatish Balay . nativetopetsc - if true, maps from H2Opus ordering to PETSc ordering. If false, applies the reverse map 1712f17f7ee2SSatish Balay - in - the vector to be mapped 1713f17f7ee2SSatish Balay 1714f17f7ee2SSatish Balay Output Parameter: 1715f17f7ee2SSatish Balay . out - the newly created mapped vector 1716f17f7ee2SSatish Balay 1717f17f7ee2SSatish Balay Level: intermediate 1718f17f7ee2SSatish Balay 1719036e4bdcSSatish Balay .seealso: `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()`, `MatCreateH2OpusFromKernel()` 1720f17f7ee2SSatish Balay @*/ 17219371c9d4SSatish Balay PetscErrorCode MatH2OpusMapVec(Mat A, PetscBool nativetopetsc, Vec in, Vec *out) { 1722f17f7ee2SSatish Balay PetscBool ish2opus; 1723f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1724f17f7ee2SSatish Balay PetscScalar *xin, *xout; 1725f17f7ee2SSatish Balay PetscBool nm; 1726f17f7ee2SSatish Balay 1727f17f7ee2SSatish Balay PetscFunctionBegin; 1728f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 1729f17f7ee2SSatish Balay PetscValidType(A, 1); 1730f17f7ee2SSatish Balay PetscValidLogicalCollectiveBool(A, nativetopetsc, 2); 1731f17f7ee2SSatish Balay PetscValidHeaderSpecific(in, VEC_CLASSID, 3); 1732f17f7ee2SSatish Balay PetscValidPointer(out, 4); 1733f17f7ee2SSatish Balay PetscCheck(A->assembled, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix"); 1734f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 1735f17f7ee2SSatish Balay PetscCheck(ish2opus, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for type %s", ((PetscObject)A)->type_name); 1736f17f7ee2SSatish Balay nm = a->nativemult; 1737f17f7ee2SSatish Balay PetscCall(MatH2OpusSetNativeMult(A, (PetscBool)!nativetopetsc)); 1738f17f7ee2SSatish Balay PetscCall(MatCreateVecs(A, out, NULL)); 1739f17f7ee2SSatish Balay PetscCall(MatH2OpusSetNativeMult(A, nm)); 1740f17f7ee2SSatish Balay if (!a->sf) { /* same ordering */ 1741f17f7ee2SSatish Balay PetscCall(VecCopy(in, *out)); 1742f17f7ee2SSatish Balay PetscFunctionReturn(0); 1743f17f7ee2SSatish Balay } 1744f17f7ee2SSatish Balay PetscCall(VecGetArrayRead(in, (const PetscScalar **)&xin)); 1745f17f7ee2SSatish Balay PetscCall(VecGetArrayWrite(*out, &xout)); 1746f17f7ee2SSatish Balay if (nativetopetsc) { 1747f17f7ee2SSatish Balay PetscCall(PetscSFReduceBegin(a->sf, MPIU_SCALAR, xin, xout, MPI_REPLACE)); 1748f17f7ee2SSatish Balay PetscCall(PetscSFReduceEnd(a->sf, MPIU_SCALAR, xin, xout, MPI_REPLACE)); 1749f17f7ee2SSatish Balay } else { 1750f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(a->sf, MPIU_SCALAR, xin, xout, MPI_REPLACE)); 1751f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(a->sf, MPIU_SCALAR, xin, xout, MPI_REPLACE)); 1752f17f7ee2SSatish Balay } 1753f17f7ee2SSatish Balay PetscCall(VecRestoreArrayRead(in, (const PetscScalar **)&xin)); 1754f17f7ee2SSatish Balay PetscCall(VecRestoreArrayWrite(*out, &xout)); 1755f17f7ee2SSatish Balay PetscFunctionReturn(0); 1756f17f7ee2SSatish Balay } 1757f17f7ee2SSatish Balay 1758f17f7ee2SSatish Balay /*@C 1759f17f7ee2SSatish Balay MatH2OpusLowRankUpdate - Perform a low-rank update of the form A = A + s * U * V^T 1760f17f7ee2SSatish Balay 1761f17f7ee2SSatish Balay Input Parameters: 176211a5261eSBarry Smith + A - the hierarchical `MATH2OPUS` matrix 1763f17f7ee2SSatish Balay . s - the scaling factor 1764f17f7ee2SSatish Balay . U - the dense low-rank update matrix 1765f17f7ee2SSatish Balay - V - (optional) the dense low-rank update matrix (if NULL, then V = U is assumed) 1766f17f7ee2SSatish Balay 176711a5261eSBarry Smith Note: 176811a5261eSBarry Smith The U and V matrices must be in dense format 1769f17f7ee2SSatish Balay 1770f17f7ee2SSatish Balay Level: intermediate 1771f17f7ee2SSatish Balay 1772036e4bdcSSatish Balay .seealso: `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()`, `MatCreateH2OpusFromKernel()`, `MatH2OpusCompress()`, `MatH2OpusOrthogonalize()`, `MATDENSE` 1773f17f7ee2SSatish Balay @*/ 17749371c9d4SSatish Balay PetscErrorCode MatH2OpusLowRankUpdate(Mat A, Mat U, Mat V, PetscScalar s) { 1775f17f7ee2SSatish Balay PetscBool flg; 1776f17f7ee2SSatish Balay 1777f17f7ee2SSatish Balay PetscFunctionBegin; 1778f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 1779f17f7ee2SSatish Balay PetscValidType(A, 1); 1780f17f7ee2SSatish Balay PetscCheck(A->assembled, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix"); 1781f17f7ee2SSatish Balay PetscValidHeaderSpecific(U, MAT_CLASSID, 2); 1782f17f7ee2SSatish Balay PetscCheckSameComm(A, 1, U, 2); 1783f17f7ee2SSatish Balay if (V) { 1784f17f7ee2SSatish Balay PetscValidHeaderSpecific(V, MAT_CLASSID, 3); 1785f17f7ee2SSatish Balay PetscCheckSameComm(A, 1, V, 3); 1786f17f7ee2SSatish Balay } 1787f17f7ee2SSatish Balay PetscValidLogicalCollectiveScalar(A, s, 4); 1788f17f7ee2SSatish Balay 1789f17f7ee2SSatish Balay if (!V) V = U; 1790036e4bdcSSatish Balay PetscCheck(U->cmap->N == V->cmap->N, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Non matching rank update %" PetscInt_FMT " != %" PetscInt_FMT, U->cmap->N, V->cmap->N); 1791f17f7ee2SSatish Balay if (!U->cmap->N) PetscFunctionReturn(0); 1792f17f7ee2SSatish Balay PetscCall(PetscLayoutCompare(U->rmap, A->rmap, &flg)); 1793f17f7ee2SSatish Balay PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "A and U must have the same row layout"); 1794f17f7ee2SSatish Balay PetscCall(PetscLayoutCompare(V->rmap, A->cmap, &flg)); 1795f17f7ee2SSatish Balay PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "A column layout must match V row column layout"); 1796f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &flg)); 1797f17f7ee2SSatish Balay if (flg) { 1798f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1799f17f7ee2SSatish Balay const PetscScalar *u, *v, *uu, *vv; 1800f17f7ee2SSatish Balay PetscInt ldu, ldv; 1801f17f7ee2SSatish Balay PetscMPIInt size; 1802f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1803f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle->handle; 1804f17f7ee2SSatish Balay #else 1805f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle; 1806f17f7ee2SSatish Balay #endif 1807f17f7ee2SSatish Balay PetscBool usesf = (PetscBool)(a->sf && !a->nativemult); 1808f17f7ee2SSatish Balay PetscSF usf, vsf; 1809f17f7ee2SSatish Balay 1810f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1811036e4bdcSSatish Balay PetscCheck(size <= 1, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not yet implemented in parallel"); 1812f17f7ee2SSatish Balay PetscCall(PetscLogEventBegin(MAT_H2Opus_LR, A, 0, 0, 0)); 1813f17f7ee2SSatish Balay PetscCall(PetscObjectBaseTypeCompareAny((PetscObject)U, &flg, MATSEQDENSE, MATMPIDENSE, "")); 1814f17f7ee2SSatish Balay PetscCheck(flg, PetscObjectComm((PetscObject)U), PETSC_ERR_SUP, "Not for U of type %s", ((PetscObject)U)->type_name); 1815f17f7ee2SSatish Balay PetscCall(PetscObjectBaseTypeCompareAny((PetscObject)V, &flg, MATSEQDENSE, MATMPIDENSE, "")); 1816f17f7ee2SSatish Balay PetscCheck(flg, PetscObjectComm((PetscObject)V), PETSC_ERR_SUP, "Not for V of type %s", ((PetscObject)V)->type_name); 1817f17f7ee2SSatish Balay PetscCall(MatDenseGetLDA(U, &ldu)); 1818f17f7ee2SSatish Balay PetscCall(MatDenseGetLDA(V, &ldv)); 1819f17f7ee2SSatish Balay PetscCall(MatBoundToCPU(A, &flg)); 1820f17f7ee2SSatish Balay if (usesf) { 1821f17f7ee2SSatish Balay PetscInt n; 1822f17f7ee2SSatish Balay 1823f17f7ee2SSatish Balay PetscCall(MatDenseGetH2OpusVectorSF(U, a->sf, &usf)); 1824f17f7ee2SSatish Balay PetscCall(MatDenseGetH2OpusVectorSF(V, a->sf, &vsf)); 1825f17f7ee2SSatish Balay PetscCall(MatH2OpusResizeBuffers_Private(A, U->cmap->N, V->cmap->N)); 1826f17f7ee2SSatish Balay PetscCall(PetscSFGetGraph(a->sf, NULL, &n, NULL, NULL)); 1827f17f7ee2SSatish Balay ldu = n; 1828f17f7ee2SSatish Balay ldv = n; 1829f17f7ee2SSatish Balay } 1830f17f7ee2SSatish Balay if (flg) { 1831f17f7ee2SSatish Balay PetscCheck(a->hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1832f17f7ee2SSatish Balay PetscCall(MatDenseGetArrayRead(U, &u)); 1833f17f7ee2SSatish Balay PetscCall(MatDenseGetArrayRead(V, &v)); 1834f17f7ee2SSatish Balay if (usesf) { 1835f17f7ee2SSatish Balay vv = MatH2OpusGetThrustPointer(*a->yy); 1836f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(vsf, MPIU_SCALAR, v, (PetscScalar *)vv, MPI_REPLACE)); 1837f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(vsf, MPIU_SCALAR, v, (PetscScalar *)vv, MPI_REPLACE)); 1838f17f7ee2SSatish Balay if (U != V) { 1839f17f7ee2SSatish Balay uu = MatH2OpusGetThrustPointer(*a->xx); 1840f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(usf, MPIU_SCALAR, u, (PetscScalar *)uu, MPI_REPLACE)); 1841f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(usf, MPIU_SCALAR, u, (PetscScalar *)uu, MPI_REPLACE)); 1842f17f7ee2SSatish Balay } else uu = vv; 18439371c9d4SSatish Balay } else { 18449371c9d4SSatish Balay uu = u; 18459371c9d4SSatish Balay vv = v; 18469371c9d4SSatish Balay } 1847f17f7ee2SSatish Balay hlru_global(*a->hmatrix, uu, ldu, vv, ldv, U->cmap->N, s, handle); 1848f17f7ee2SSatish Balay PetscCall(MatDenseRestoreArrayRead(U, &u)); 1849f17f7ee2SSatish Balay PetscCall(MatDenseRestoreArrayRead(V, &v)); 1850f17f7ee2SSatish Balay } else { 1851f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1852f17f7ee2SSatish Balay PetscBool flgU, flgV; 1853f17f7ee2SSatish Balay 1854f17f7ee2SSatish Balay PetscCheck(a->hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1855f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)U, &flgU, MATSEQDENSE, MATMPIDENSE, "")); 1856f17f7ee2SSatish Balay if (flgU) PetscCall(MatConvert(U, MATDENSECUDA, MAT_INPLACE_MATRIX, &U)); 1857f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)V, &flgV, MATSEQDENSE, MATMPIDENSE, "")); 1858f17f7ee2SSatish Balay if (flgV) PetscCall(MatConvert(V, MATDENSECUDA, MAT_INPLACE_MATRIX, &V)); 1859f17f7ee2SSatish Balay PetscCall(MatDenseCUDAGetArrayRead(U, &u)); 1860f17f7ee2SSatish Balay PetscCall(MatDenseCUDAGetArrayRead(V, &v)); 1861f17f7ee2SSatish Balay if (usesf) { 1862f17f7ee2SSatish Balay vv = MatH2OpusGetThrustPointer(*a->yy_gpu); 1863f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(vsf, MPIU_SCALAR, v, (PetscScalar *)vv, MPI_REPLACE)); 1864f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(vsf, MPIU_SCALAR, v, (PetscScalar *)vv, MPI_REPLACE)); 1865f17f7ee2SSatish Balay if (U != V) { 1866f17f7ee2SSatish Balay uu = MatH2OpusGetThrustPointer(*a->xx_gpu); 1867f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(usf, MPIU_SCALAR, u, (PetscScalar *)uu, MPI_REPLACE)); 1868f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(usf, MPIU_SCALAR, u, (PetscScalar *)uu, MPI_REPLACE)); 1869f17f7ee2SSatish Balay } else uu = vv; 18709371c9d4SSatish Balay } else { 18719371c9d4SSatish Balay uu = u; 18729371c9d4SSatish Balay vv = v; 18739371c9d4SSatish Balay } 1874f17f7ee2SSatish Balay #else 1875f17f7ee2SSatish Balay SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "This should not happen"); 1876f17f7ee2SSatish Balay #endif 1877f17f7ee2SSatish Balay hlru_global(*a->hmatrix_gpu, uu, ldu, vv, ldv, U->cmap->N, s, handle); 1878f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1879f17f7ee2SSatish Balay PetscCall(MatDenseCUDARestoreArrayRead(U, &u)); 1880f17f7ee2SSatish Balay PetscCall(MatDenseCUDARestoreArrayRead(V, &v)); 1881f17f7ee2SSatish Balay if (flgU) PetscCall(MatConvert(U, MATDENSE, MAT_INPLACE_MATRIX, &U)); 1882f17f7ee2SSatish Balay if (flgV) PetscCall(MatConvert(V, MATDENSE, MAT_INPLACE_MATRIX, &V)); 1883f17f7ee2SSatish Balay #endif 1884f17f7ee2SSatish Balay } 1885f17f7ee2SSatish Balay PetscCall(PetscLogEventEnd(MAT_H2Opus_LR, A, 0, 0, 0)); 1886f17f7ee2SSatish Balay a->orthogonal = PETSC_FALSE; 1887f17f7ee2SSatish Balay } 1888f17f7ee2SSatish Balay PetscFunctionReturn(0); 1889f17f7ee2SSatish Balay } 1890f17f7ee2SSatish Balay #endif 1891