1f17f7ee2SSatish Balay #include <h2opusconf.h> 2f17f7ee2SSatish Balay /* skip compilation of this .cu file if H2OPUS is CPU only while PETSc has GPU support */ 3f17f7ee2SSatish Balay #if !defined(__CUDACC__) || defined(H2OPUS_USE_GPU) 4f17f7ee2SSatish Balay #include <h2opus.h> 5f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 6f17f7ee2SSatish Balay #include <h2opus/distributed/distributed_h2opus_handle.h> 7f17f7ee2SSatish Balay #include <h2opus/distributed/distributed_geometric_construction.h> 8f17f7ee2SSatish Balay #include <h2opus/distributed/distributed_hgemv.h> 9f17f7ee2SSatish Balay #include <h2opus/distributed/distributed_horthog.h> 10f17f7ee2SSatish Balay #include <h2opus/distributed/distributed_hcompress.h> 11f17f7ee2SSatish Balay #endif 12f17f7ee2SSatish Balay #include <h2opus/util/boxentrygen.h> 13f17f7ee2SSatish Balay #include <petsc/private/matimpl.h> 14f17f7ee2SSatish Balay #include <petsc/private/vecimpl.h> 15cc4c1da9SBarry Smith #include <petsc/private/deviceimpl.h> /*I "petscmat.h" I*/ 16f17f7ee2SSatish Balay #include <petscsf.h> 17f17f7ee2SSatish Balay 18f17f7ee2SSatish Balay /* math2opusutils */ 190dd791a8SStefano Zampini PETSC_INTERN PetscErrorCode MatDenseGetH2OpusStridedSF(Mat, PetscSF, PetscSF *); 20f17f7ee2SSatish Balay PETSC_INTERN PetscErrorCode VecSign(Vec, Vec); 21f17f7ee2SSatish Balay PETSC_INTERN PetscErrorCode VecSetDelta(Vec, PetscInt); 22f17f7ee2SSatish Balay PETSC_INTERN PetscErrorCode MatApproximateNorm_Private(Mat, NormType, PetscInt, PetscReal *); 23f17f7ee2SSatish Balay 24f17f7ee2SSatish Balay #define MatH2OpusGetThrustPointer(v) thrust::raw_pointer_cast((v).data()) 25f17f7ee2SSatish Balay 26f17f7ee2SSatish Balay /* Use GPU only if H2OPUS is configured for GPU */ 27f17f7ee2SSatish Balay #if defined(PETSC_HAVE_CUDA) && defined(H2OPUS_USE_GPU) 28f17f7ee2SSatish Balay #define PETSC_H2OPUS_USE_GPU 29f17f7ee2SSatish Balay #endif 30f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 31f17f7ee2SSatish Balay #define MatH2OpusUpdateIfNeeded(A, B) MatBindToCPU(A, (PetscBool)((A)->boundtocpu || (B))) 32f17f7ee2SSatish Balay #else 333ba16761SJacob Faibussowitsch #define MatH2OpusUpdateIfNeeded(A, B) PETSC_SUCCESS 34f17f7ee2SSatish Balay #endif 35f17f7ee2SSatish Balay 36f17f7ee2SSatish Balay // TODO H2OPUS: 37f17f7ee2SSatish Balay // DistributedHMatrix 38f17f7ee2SSatish Balay // unsymmetric ? 39f17f7ee2SSatish Balay // transpose for distributed_hgemv? 40f17f7ee2SSatish Balay // clearData() 41f17f7ee2SSatish Balay // Unify interface for sequential and parallel? 42f17f7ee2SSatish Balay // Reuse geometric construction (almost possible, only the unsymmetric case is explicitly handled) 43f17f7ee2SSatish Balay // 449371c9d4SSatish Balay template <class T> 459371c9d4SSatish Balay class PetscPointCloud : public H2OpusDataSet<T> { 46f17f7ee2SSatish Balay private: 47f17f7ee2SSatish Balay int dimension; 48f17f7ee2SSatish Balay size_t num_points; 49f17f7ee2SSatish Balay std::vector<T> pts; 50f17f7ee2SSatish Balay 51f17f7ee2SSatish Balay public: 52d71ae5a4SJacob Faibussowitsch PetscPointCloud(int dim, size_t num_pts, const T coords[]) 53d71ae5a4SJacob Faibussowitsch { 54f17f7ee2SSatish Balay dim = dim > 0 ? dim : 1; 55f17f7ee2SSatish Balay this->dimension = dim; 56f17f7ee2SSatish Balay this->num_points = num_pts; 57f17f7ee2SSatish Balay 58f17f7ee2SSatish Balay pts.resize(num_pts * dim); 59f17f7ee2SSatish Balay if (coords) { 60036e4bdcSSatish Balay for (size_t n = 0; n < num_pts; n++) 619371c9d4SSatish Balay for (int i = 0; i < dim; i++) pts[n * dim + i] = coords[n * dim + i]; 62f17f7ee2SSatish Balay } else { 63036e4bdcSSatish Balay PetscReal h = 1.0; //num_pts > 1 ? 1./(num_pts - 1) : 0.0; 64036e4bdcSSatish Balay for (size_t n = 0; n < num_pts; n++) { 65036e4bdcSSatish Balay pts[n * dim] = n * h; 669371c9d4SSatish Balay for (int i = 1; i < dim; i++) pts[n * dim + i] = 0.0; 67036e4bdcSSatish Balay } 68f17f7ee2SSatish Balay } 69f17f7ee2SSatish Balay } 70f17f7ee2SSatish Balay 71d71ae5a4SJacob Faibussowitsch PetscPointCloud(const PetscPointCloud<T> &other) 72d71ae5a4SJacob Faibussowitsch { 73f17f7ee2SSatish Balay size_t N = other.dimension * other.num_points; 74f17f7ee2SSatish Balay this->dimension = other.dimension; 75f17f7ee2SSatish Balay this->num_points = other.num_points; 76f17f7ee2SSatish Balay this->pts.resize(N); 779371c9d4SSatish Balay for (size_t i = 0; i < N; i++) this->pts[i] = other.pts[i]; 78f17f7ee2SSatish Balay } 79f17f7ee2SSatish Balay 809371c9d4SSatish Balay int getDimension() const { return dimension; } 81f17f7ee2SSatish Balay 829371c9d4SSatish Balay size_t getDataSetSize() const { return num_points; } 83f17f7ee2SSatish Balay 84d71ae5a4SJacob Faibussowitsch T getDataPoint(size_t idx, int dim) const 85d71ae5a4SJacob Faibussowitsch { 86f17f7ee2SSatish Balay assert(dim < dimension && idx < num_points); 87f17f7ee2SSatish Balay return pts[idx * dimension + dim]; 88f17f7ee2SSatish Balay } 89f17f7ee2SSatish Balay 90d71ae5a4SJacob Faibussowitsch void Print(std::ostream &out = std::cout) 91d71ae5a4SJacob Faibussowitsch { 92f17f7ee2SSatish Balay out << "Dimension: " << dimension << std::endl; 93f17f7ee2SSatish Balay out << "NumPoints: " << num_points << std::endl; 94f17f7ee2SSatish Balay for (size_t n = 0; n < num_points; n++) { 959371c9d4SSatish Balay for (int d = 0; d < dimension; d++) out << pts[n * dimension + d] << " "; 96f17f7ee2SSatish Balay out << std::endl; 97f17f7ee2SSatish Balay } 98f17f7ee2SSatish Balay } 99f17f7ee2SSatish Balay }; 100f17f7ee2SSatish Balay 1019371c9d4SSatish Balay template <class T> 1029371c9d4SSatish Balay class PetscFunctionGenerator { 103f17f7ee2SSatish Balay private: 1048434afd1SBarry Smith MatH2OpusKernelFn *k; 105f17f7ee2SSatish Balay int dim; 106f17f7ee2SSatish Balay void *ctx; 107f17f7ee2SSatish Balay 108f17f7ee2SSatish Balay public: 1092a8381b2SBarry Smith PetscFunctionGenerator(MatH2OpusKernelFn *k, int dim, PetscCtx ctx) 110d71ae5a4SJacob Faibussowitsch { 1119371c9d4SSatish Balay this->k = k; 1129371c9d4SSatish Balay this->dim = dim; 1139371c9d4SSatish Balay this->ctx = ctx; 114f17f7ee2SSatish Balay } 115d71ae5a4SJacob Faibussowitsch PetscFunctionGenerator(PetscFunctionGenerator &other) 116d71ae5a4SJacob Faibussowitsch { 1179371c9d4SSatish Balay this->k = other.k; 1189371c9d4SSatish Balay this->dim = other.dim; 1199371c9d4SSatish Balay this->ctx = other.ctx; 1209371c9d4SSatish Balay } 1219371c9d4SSatish Balay T operator()(PetscReal *pt1, PetscReal *pt2) { return (T)((*this->k)(this->dim, pt1, pt2, this->ctx)); } 122f17f7ee2SSatish Balay }; 123f17f7ee2SSatish Balay 124f17f7ee2SSatish Balay #include <../src/mat/impls/h2opus/math2opussampler.hpp> 125f17f7ee2SSatish Balay 126f17f7ee2SSatish Balay /* just to not clutter the code */ 127f17f7ee2SSatish Balay #if !defined(H2OPUS_USE_GPU) 128f17f7ee2SSatish Balay typedef HMatrix HMatrix_GPU; 129f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 130f17f7ee2SSatish Balay typedef DistributedHMatrix DistributedHMatrix_GPU; 131f17f7ee2SSatish Balay #endif 132f17f7ee2SSatish Balay #endif 133f17f7ee2SSatish Balay 134f17f7ee2SSatish Balay typedef struct { 135f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 136f17f7ee2SSatish Balay distributedH2OpusHandle_t handle; 137f17f7ee2SSatish Balay #else 138f17f7ee2SSatish Balay h2opusHandle_t handle; 139f17f7ee2SSatish Balay #endif 140f17f7ee2SSatish Balay /* Sequential and parallel matrices are two different classes at the moment */ 141f17f7ee2SSatish Balay HMatrix *hmatrix; 142f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 143f17f7ee2SSatish Balay DistributedHMatrix *dist_hmatrix; 144f17f7ee2SSatish Balay #else 145f17f7ee2SSatish Balay HMatrix *dist_hmatrix; /* just to not clutter the code */ 146f17f7ee2SSatish Balay #endif 147f17f7ee2SSatish Balay /* May use permutations */ 148f17f7ee2SSatish Balay PetscSF sf; 149f17f7ee2SSatish Balay PetscLayout h2opus_rmap, h2opus_cmap; 150f17f7ee2SSatish Balay IS h2opus_indexmap; 151f17f7ee2SSatish Balay thrust::host_vector<PetscScalar> *xx, *yy; 152f17f7ee2SSatish Balay PetscInt xxs, yys; 153f17f7ee2SSatish Balay PetscBool multsetup; 154f17f7ee2SSatish Balay 155f17f7ee2SSatish Balay /* GPU */ 156f17f7ee2SSatish Balay HMatrix_GPU *hmatrix_gpu; 157f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 158f17f7ee2SSatish Balay DistributedHMatrix_GPU *dist_hmatrix_gpu; 159f17f7ee2SSatish Balay #else 160f17f7ee2SSatish Balay HMatrix_GPU *dist_hmatrix_gpu; /* just to not clutter the code */ 161f17f7ee2SSatish Balay #endif 162f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 163f17f7ee2SSatish Balay thrust::device_vector<PetscScalar> *xx_gpu, *yy_gpu; 164f17f7ee2SSatish Balay PetscInt xxs_gpu, yys_gpu; 165f17f7ee2SSatish Balay #endif 166f17f7ee2SSatish Balay 167f17f7ee2SSatish Balay /* construction from matvecs */ 168f17f7ee2SSatish Balay PetscMatrixSampler *sampler; 169f17f7ee2SSatish Balay PetscBool nativemult; 170f17f7ee2SSatish Balay 171f17f7ee2SSatish Balay /* Admissibility */ 172f17f7ee2SSatish Balay PetscReal eta; 173f17f7ee2SSatish Balay PetscInt leafsize; 174f17f7ee2SSatish Balay 175f17f7ee2SSatish Balay /* for dof reordering */ 176f17f7ee2SSatish Balay PetscPointCloud<PetscReal> *ptcloud; 177f17f7ee2SSatish Balay 178f17f7ee2SSatish Balay /* kernel for generating matrix entries */ 179f17f7ee2SSatish Balay PetscFunctionGenerator<PetscScalar> *kernel; 180f17f7ee2SSatish Balay 181f17f7ee2SSatish Balay /* basis orthogonalized? */ 182f17f7ee2SSatish Balay PetscBool orthogonal; 183f17f7ee2SSatish Balay 184f17f7ee2SSatish Balay /* customization */ 185f17f7ee2SSatish Balay PetscInt basisord; 186f17f7ee2SSatish Balay PetscInt max_rank; 187f17f7ee2SSatish Balay PetscInt bs; 188f17f7ee2SSatish Balay PetscReal rtol; 189f17f7ee2SSatish Balay PetscInt norm_max_samples; 190f17f7ee2SSatish Balay PetscBool check_construction; 191f17f7ee2SSatish Balay PetscBool hara_verbose; 192036e4bdcSSatish Balay PetscBool resize; 193f17f7ee2SSatish Balay 194f17f7ee2SSatish Balay /* keeps track of MatScale values */ 195f17f7ee2SSatish Balay PetscScalar s; 196f17f7ee2SSatish Balay } Mat_H2OPUS; 197f17f7ee2SSatish Balay 198d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDestroy_H2OPUS(Mat A) 199d71ae5a4SJacob Faibussowitsch { 200f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 201f17f7ee2SSatish Balay 202f17f7ee2SSatish Balay PetscFunctionBegin; 203f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 204f17f7ee2SSatish Balay h2opusDestroyDistributedHandle(a->handle); 205f17f7ee2SSatish Balay #else 206f17f7ee2SSatish Balay h2opusDestroyHandle(a->handle); 207f17f7ee2SSatish Balay #endif 208f17f7ee2SSatish Balay delete a->dist_hmatrix; 209f17f7ee2SSatish Balay delete a->hmatrix; 210f17f7ee2SSatish Balay PetscCall(PetscSFDestroy(&a->sf)); 211f17f7ee2SSatish Balay PetscCall(PetscLayoutDestroy(&a->h2opus_rmap)); 212f17f7ee2SSatish Balay PetscCall(PetscLayoutDestroy(&a->h2opus_cmap)); 213f17f7ee2SSatish Balay PetscCall(ISDestroy(&a->h2opus_indexmap)); 214f17f7ee2SSatish Balay delete a->xx; 215f17f7ee2SSatish Balay delete a->yy; 216f17f7ee2SSatish Balay delete a->hmatrix_gpu; 217f17f7ee2SSatish Balay delete a->dist_hmatrix_gpu; 218f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 219f17f7ee2SSatish Balay delete a->xx_gpu; 220f17f7ee2SSatish Balay delete a->yy_gpu; 221f17f7ee2SSatish Balay #endif 222f17f7ee2SSatish Balay delete a->sampler; 223f17f7ee2SSatish Balay delete a->ptcloud; 224f17f7ee2SSatish Balay delete a->kernel; 225f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_seqdense_C", NULL)); 226f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_seqdensecuda_C", NULL)); 227f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_mpidense_C", NULL)); 228f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_mpidensecuda_C", NULL)); 229f17f7ee2SSatish Balay PetscCall(PetscObjectChangeTypeName((PetscObject)A, NULL)); 230f17f7ee2SSatish Balay PetscCall(PetscFree(A->data)); 2313ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 232f17f7ee2SSatish Balay } 233f17f7ee2SSatish Balay 234d71ae5a4SJacob Faibussowitsch PetscErrorCode MatH2OpusSetNativeMult(Mat A, PetscBool nm) 235d71ae5a4SJacob Faibussowitsch { 236f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 237f17f7ee2SSatish Balay PetscBool ish2opus; 238f17f7ee2SSatish Balay 239f17f7ee2SSatish Balay PetscFunctionBegin; 240f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 241f17f7ee2SSatish Balay PetscValidLogicalCollectiveBool(A, nm, 2); 242f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 243f17f7ee2SSatish Balay if (ish2opus) { 244f17f7ee2SSatish Balay if (a->h2opus_rmap) { /* need to swap layouts for vector creation */ 245f17f7ee2SSatish Balay if ((!a->nativemult && nm) || (a->nativemult && !nm)) { 246f17f7ee2SSatish Balay PetscLayout t; 247f17f7ee2SSatish Balay t = A->rmap; 248f17f7ee2SSatish Balay A->rmap = a->h2opus_rmap; 249f17f7ee2SSatish Balay a->h2opus_rmap = t; 250f17f7ee2SSatish Balay t = A->cmap; 251f17f7ee2SSatish Balay A->cmap = a->h2opus_cmap; 252f17f7ee2SSatish Balay a->h2opus_cmap = t; 253f17f7ee2SSatish Balay } 254f17f7ee2SSatish Balay } 255f17f7ee2SSatish Balay a->nativemult = nm; 256f17f7ee2SSatish Balay } 2573ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 258f17f7ee2SSatish Balay } 259f17f7ee2SSatish Balay 260d71ae5a4SJacob Faibussowitsch PetscErrorCode MatH2OpusGetNativeMult(Mat A, PetscBool *nm) 261d71ae5a4SJacob Faibussowitsch { 262f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 263f17f7ee2SSatish Balay PetscBool ish2opus; 264f17f7ee2SSatish Balay 265f17f7ee2SSatish Balay PetscFunctionBegin; 266f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 2674f572ea9SToby Isaac PetscAssertPointer(nm, 2); 268f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 269f17f7ee2SSatish Balay PetscCheck(ish2opus, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for type %s", ((PetscObject)A)->type_name); 270f17f7ee2SSatish Balay *nm = a->nativemult; 2713ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 272f17f7ee2SSatish Balay } 273f17f7ee2SSatish Balay 274d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatNorm_H2OPUS(Mat A, NormType normtype, PetscReal *n) 275d71ae5a4SJacob Faibussowitsch { 276f17f7ee2SSatish Balay PetscBool ish2opus; 277f17f7ee2SSatish Balay PetscInt nmax = PETSC_DECIDE; 278f17f7ee2SSatish Balay Mat_H2OPUS *a = NULL; 279f17f7ee2SSatish Balay PetscBool mult = PETSC_FALSE; 280f17f7ee2SSatish Balay 281f17f7ee2SSatish Balay PetscFunctionBegin; 282f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 283f17f7ee2SSatish Balay if (ish2opus) { /* set userdefine number of samples and fastpath for mult (norms are order independent) */ 284f17f7ee2SSatish Balay a = (Mat_H2OPUS *)A->data; 285f17f7ee2SSatish Balay 286f17f7ee2SSatish Balay nmax = a->norm_max_samples; 287f17f7ee2SSatish Balay mult = a->nativemult; 288f17f7ee2SSatish Balay PetscCall(MatH2OpusSetNativeMult(A, PETSC_TRUE)); 289f17f7ee2SSatish Balay } else { 290f17f7ee2SSatish Balay PetscCall(PetscOptionsGetInt(((PetscObject)A)->options, ((PetscObject)A)->prefix, "-mat_approximate_norm_samples", &nmax, NULL)); 291f17f7ee2SSatish Balay } 292f17f7ee2SSatish Balay PetscCall(MatApproximateNorm_Private(A, normtype, nmax, n)); 293f17f7ee2SSatish Balay if (a) PetscCall(MatH2OpusSetNativeMult(A, mult)); 2943ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 295f17f7ee2SSatish Balay } 296f17f7ee2SSatish Balay 297d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatH2OpusResizeBuffers_Private(Mat A, PetscInt xN, PetscInt yN) 298d71ae5a4SJacob Faibussowitsch { 299f17f7ee2SSatish Balay Mat_H2OPUS *h2opus = (Mat_H2OPUS *)A->data; 300f17f7ee2SSatish Balay PetscInt n; 301f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 302f17f7ee2SSatish Balay 303f17f7ee2SSatish Balay PetscFunctionBegin; 304f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 305f17f7ee2SSatish Balay boundtocpu = A->boundtocpu; 306f17f7ee2SSatish Balay #endif 307f17f7ee2SSatish Balay PetscCall(PetscSFGetGraph(h2opus->sf, NULL, &n, NULL, NULL)); 308f17f7ee2SSatish Balay if (boundtocpu) { 3099371c9d4SSatish Balay if (h2opus->xxs < xN) { 3109371c9d4SSatish Balay h2opus->xx->resize(n * xN); 3119371c9d4SSatish Balay h2opus->xxs = xN; 3129371c9d4SSatish Balay } 3139371c9d4SSatish Balay if (h2opus->yys < yN) { 3149371c9d4SSatish Balay h2opus->yy->resize(n * yN); 3159371c9d4SSatish Balay h2opus->yys = yN; 3169371c9d4SSatish Balay } 317f17f7ee2SSatish Balay } 318f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 319f17f7ee2SSatish Balay if (!boundtocpu) { 3209371c9d4SSatish Balay if (h2opus->xxs_gpu < xN) { 3219371c9d4SSatish Balay h2opus->xx_gpu->resize(n * xN); 3229371c9d4SSatish Balay h2opus->xxs_gpu = xN; 3239371c9d4SSatish Balay } 3249371c9d4SSatish Balay if (h2opus->yys_gpu < yN) { 3259371c9d4SSatish Balay h2opus->yy_gpu->resize(n * yN); 3269371c9d4SSatish Balay h2opus->yys_gpu = yN; 3279371c9d4SSatish Balay } 328f17f7ee2SSatish Balay } 329f17f7ee2SSatish Balay #endif 3303ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 331f17f7ee2SSatish Balay } 332f17f7ee2SSatish Balay 333d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultNKernel_H2OPUS(Mat A, PetscBool transA, Mat B, Mat C) 334d71ae5a4SJacob Faibussowitsch { 335f17f7ee2SSatish Balay Mat_H2OPUS *h2opus = (Mat_H2OPUS *)A->data; 336f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 337f17f7ee2SSatish Balay h2opusHandle_t handle = h2opus->handle->handle; 338f17f7ee2SSatish Balay #else 339f17f7ee2SSatish Balay h2opusHandle_t handle = h2opus->handle; 340f17f7ee2SSatish Balay #endif 341f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 342f17f7ee2SSatish Balay PetscScalar *xx, *yy, *uxx, *uyy; 343f17f7ee2SSatish Balay PetscInt blda, clda; 344f17f7ee2SSatish Balay PetscMPIInt size; 345f17f7ee2SSatish Balay PetscSF bsf, csf; 346f17f7ee2SSatish Balay PetscBool usesf = (PetscBool)(h2opus->sf && !h2opus->nativemult); 347f17f7ee2SSatish Balay 348f17f7ee2SSatish Balay PetscFunctionBegin; 349f17f7ee2SSatish Balay HLibProfile::clear(); 350f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 351f17f7ee2SSatish Balay boundtocpu = A->boundtocpu; 352f17f7ee2SSatish Balay #endif 353f17f7ee2SSatish Balay PetscCall(MatDenseGetLDA(B, &blda)); 354f17f7ee2SSatish Balay PetscCall(MatDenseGetLDA(C, &clda)); 355f17f7ee2SSatish Balay if (usesf) { 356f17f7ee2SSatish Balay PetscInt n; 357f17f7ee2SSatish Balay 3580dd791a8SStefano Zampini PetscCall(MatDenseGetH2OpusStridedSF(B, h2opus->sf, &bsf)); 3590dd791a8SStefano Zampini PetscCall(MatDenseGetH2OpusStridedSF(C, h2opus->sf, &csf)); 360f17f7ee2SSatish Balay 361f17f7ee2SSatish Balay PetscCall(MatH2OpusResizeBuffers_Private(A, B->cmap->N, C->cmap->N)); 362f17f7ee2SSatish Balay PetscCall(PetscSFGetGraph(h2opus->sf, NULL, &n, NULL, NULL)); 363f17f7ee2SSatish Balay blda = n; 364f17f7ee2SSatish Balay clda = n; 365f17f7ee2SSatish Balay } 366f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 367f17f7ee2SSatish Balay if (boundtocpu) { 368f17f7ee2SSatish Balay PetscCall(MatDenseGetArrayRead(B, (const PetscScalar **)&xx)); 369f17f7ee2SSatish Balay PetscCall(MatDenseGetArrayWrite(C, &yy)); 370f17f7ee2SSatish Balay if (usesf) { 371f17f7ee2SSatish Balay uxx = MatH2OpusGetThrustPointer(*h2opus->xx); 372f17f7ee2SSatish Balay uyy = MatH2OpusGetThrustPointer(*h2opus->yy); 373f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(bsf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 374f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(bsf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 375f17f7ee2SSatish Balay } else { 376f17f7ee2SSatish Balay uxx = xx; 377f17f7ee2SSatish Balay uyy = yy; 378f17f7ee2SSatish Balay } 379f17f7ee2SSatish Balay if (size > 1) { 380f17f7ee2SSatish Balay PetscCheck(h2opus->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed CPU matrix"); 381036e4bdcSSatish Balay PetscCheck(!transA || A->symmetric, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "MatMultTranspose not yet coded in parallel"); 382f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 383f17f7ee2SSatish Balay distributed_hgemv(/* transA ? H2Opus_Trans : H2Opus_NoTrans, */ h2opus->s, *h2opus->dist_hmatrix, uxx, blda, 0.0, uyy, clda, B->cmap->N, h2opus->handle); 384f17f7ee2SSatish Balay #endif 385f17f7ee2SSatish Balay } else { 386f17f7ee2SSatish Balay PetscCheck(h2opus->hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 387f17f7ee2SSatish Balay hgemv(transA ? H2Opus_Trans : H2Opus_NoTrans, h2opus->s, *h2opus->hmatrix, uxx, blda, 0.0, uyy, clda, B->cmap->N, handle); 388f17f7ee2SSatish Balay } 389f17f7ee2SSatish Balay PetscCall(MatDenseRestoreArrayRead(B, (const PetscScalar **)&xx)); 390f17f7ee2SSatish Balay if (usesf) { 391f17f7ee2SSatish Balay PetscCall(PetscSFReduceBegin(csf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 392f17f7ee2SSatish Balay PetscCall(PetscSFReduceEnd(csf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 393f17f7ee2SSatish Balay } 394f17f7ee2SSatish Balay PetscCall(MatDenseRestoreArrayWrite(C, &yy)); 395f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 396f17f7ee2SSatish Balay } else { 397f17f7ee2SSatish Balay PetscBool ciscuda, biscuda; 398f17f7ee2SSatish Balay 399f17f7ee2SSatish Balay /* If not of type seqdensecuda, convert on the fly (i.e. allocate GPU memory) */ 400f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)B, &biscuda, MATSEQDENSECUDA, MATMPIDENSECUDA, "")); 40148a46eb9SPierre Jolivet if (!biscuda) PetscCall(MatConvert(B, MATDENSECUDA, MAT_INPLACE_MATRIX, &B)); 402f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &ciscuda, MATSEQDENSECUDA, MATMPIDENSECUDA, "")); 403f17f7ee2SSatish Balay if (!ciscuda) { 404f17f7ee2SSatish Balay C->assembled = PETSC_TRUE; 405f17f7ee2SSatish Balay PetscCall(MatConvert(C, MATDENSECUDA, MAT_INPLACE_MATRIX, &C)); 406f17f7ee2SSatish Balay } 407f17f7ee2SSatish Balay PetscCall(MatDenseCUDAGetArrayRead(B, (const PetscScalar **)&xx)); 408f17f7ee2SSatish Balay PetscCall(MatDenseCUDAGetArrayWrite(C, &yy)); 409f17f7ee2SSatish Balay if (usesf) { 410f17f7ee2SSatish Balay uxx = MatH2OpusGetThrustPointer(*h2opus->xx_gpu); 411f17f7ee2SSatish Balay uyy = MatH2OpusGetThrustPointer(*h2opus->yy_gpu); 412f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(bsf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 413f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(bsf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 414f17f7ee2SSatish Balay } else { 415f17f7ee2SSatish Balay uxx = xx; 416f17f7ee2SSatish Balay uyy = yy; 417f17f7ee2SSatish Balay } 418f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeBegin()); 419f17f7ee2SSatish Balay if (size > 1) { 420f17f7ee2SSatish Balay PetscCheck(h2opus->dist_hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed GPU matrix"); 421036e4bdcSSatish Balay PetscCheck(!transA || A->symmetric, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "MatMultTranspose not yet coded in parallel"); 422f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 423f17f7ee2SSatish Balay distributed_hgemv(/* transA ? H2Opus_Trans : H2Opus_NoTrans, */ h2opus->s, *h2opus->dist_hmatrix_gpu, uxx, blda, 0.0, uyy, clda, B->cmap->N, h2opus->handle); 424f17f7ee2SSatish Balay #endif 425f17f7ee2SSatish Balay } else { 426f17f7ee2SSatish Balay PetscCheck(h2opus->hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 427f17f7ee2SSatish Balay hgemv(transA ? H2Opus_Trans : H2Opus_NoTrans, h2opus->s, *h2opus->hmatrix_gpu, uxx, blda, 0.0, uyy, clda, B->cmap->N, handle); 428f17f7ee2SSatish Balay } 429f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeEnd()); 430f17f7ee2SSatish Balay PetscCall(MatDenseCUDARestoreArrayRead(B, (const PetscScalar **)&xx)); 431f17f7ee2SSatish Balay if (usesf) { 432f17f7ee2SSatish Balay PetscCall(PetscSFReduceBegin(csf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 433f17f7ee2SSatish Balay PetscCall(PetscSFReduceEnd(csf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 434f17f7ee2SSatish Balay } 435f17f7ee2SSatish Balay PetscCall(MatDenseCUDARestoreArrayWrite(C, &yy)); 43648a46eb9SPierre Jolivet if (!biscuda) PetscCall(MatConvert(B, MATDENSE, MAT_INPLACE_MATRIX, &B)); 43748a46eb9SPierre Jolivet if (!ciscuda) PetscCall(MatConvert(C, MATDENSE, MAT_INPLACE_MATRIX, &C)); 438f17f7ee2SSatish Balay #endif 439f17f7ee2SSatish Balay } 440f17f7ee2SSatish Balay { /* log flops */ 441f17f7ee2SSatish Balay double gops, time, perf, dev; 442f17f7ee2SSatish Balay HLibProfile::getHgemvPerf(gops, time, perf, dev); 443f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 444f17f7ee2SSatish Balay if (boundtocpu) { 445f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 446f17f7ee2SSatish Balay } else { 447f17f7ee2SSatish Balay PetscCall(PetscLogGpuFlops(1e9 * gops)); 448f17f7ee2SSatish Balay } 449f17f7ee2SSatish Balay #else 450f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 451f17f7ee2SSatish Balay #endif 452f17f7ee2SSatish Balay } 4533ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 454f17f7ee2SSatish Balay } 455f17f7ee2SSatish Balay 456d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductNumeric_H2OPUS(Mat C) 457d71ae5a4SJacob Faibussowitsch { 458f17f7ee2SSatish Balay Mat_Product *product = C->product; 459f17f7ee2SSatish Balay 460f17f7ee2SSatish Balay PetscFunctionBegin; 461f17f7ee2SSatish Balay MatCheckProduct(C, 1); 462f17f7ee2SSatish Balay switch (product->type) { 463d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AB: 464d71ae5a4SJacob Faibussowitsch PetscCall(MatMultNKernel_H2OPUS(product->A, PETSC_FALSE, product->B, C)); 465d71ae5a4SJacob Faibussowitsch break; 466d71ae5a4SJacob Faibussowitsch case MATPRODUCT_AtB: 467d71ae5a4SJacob Faibussowitsch PetscCall(MatMultNKernel_H2OPUS(product->A, PETSC_TRUE, product->B, C)); 468d71ae5a4SJacob Faibussowitsch break; 469d71ae5a4SJacob Faibussowitsch default: 470d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "MatProduct type %s is not supported", MatProductTypes[product->type]); 471f17f7ee2SSatish Balay } 4723ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 473f17f7ee2SSatish Balay } 474f17f7ee2SSatish Balay 475d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSymbolic_H2OPUS(Mat C) 476d71ae5a4SJacob Faibussowitsch { 477f17f7ee2SSatish Balay Mat_Product *product = C->product; 478f17f7ee2SSatish Balay PetscBool cisdense; 479f17f7ee2SSatish Balay Mat A, B; 480f17f7ee2SSatish Balay 481f17f7ee2SSatish Balay PetscFunctionBegin; 482f17f7ee2SSatish Balay MatCheckProduct(C, 1); 483f17f7ee2SSatish Balay A = product->A; 484f17f7ee2SSatish Balay B = product->B; 485f17f7ee2SSatish Balay switch (product->type) { 486f17f7ee2SSatish Balay case MATPRODUCT_AB: 487f17f7ee2SSatish Balay PetscCall(MatSetSizes(C, A->rmap->n, B->cmap->n, A->rmap->N, B->cmap->N)); 488f17f7ee2SSatish Balay PetscCall(MatSetBlockSizesFromMats(C, product->A, product->B)); 489f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATSEQDENSE, MATMPIDENSE, MATSEQDENSECUDA, MATMPIDENSECUDA, "")); 490f17f7ee2SSatish Balay if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)product->B)->type_name)); 491f17f7ee2SSatish Balay PetscCall(MatSetUp(C)); 492f17f7ee2SSatish Balay break; 493f17f7ee2SSatish Balay case MATPRODUCT_AtB: 494f17f7ee2SSatish Balay PetscCall(MatSetSizes(C, A->cmap->n, B->cmap->n, A->cmap->N, B->cmap->N)); 495f17f7ee2SSatish Balay PetscCall(MatSetBlockSizesFromMats(C, product->A, product->B)); 496f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)C, &cisdense, MATSEQDENSE, MATMPIDENSE, MATSEQDENSECUDA, MATMPIDENSECUDA, "")); 497f17f7ee2SSatish Balay if (!cisdense) PetscCall(MatSetType(C, ((PetscObject)product->B)->type_name)); 498f17f7ee2SSatish Balay PetscCall(MatSetUp(C)); 499f17f7ee2SSatish Balay break; 500d71ae5a4SJacob Faibussowitsch default: 501d71ae5a4SJacob Faibussowitsch SETERRQ(PETSC_COMM_SELF, PETSC_ERR_SUP, "MatProduct type %s is not supported", MatProductTypes[product->type]); 502f17f7ee2SSatish Balay } 503f17f7ee2SSatish Balay C->ops->productsymbolic = NULL; 504f17f7ee2SSatish Balay C->ops->productnumeric = MatProductNumeric_H2OPUS; 5053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 506f17f7ee2SSatish Balay } 507f17f7ee2SSatish Balay 508d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatProductSetFromOptions_H2OPUS(Mat C) 509d71ae5a4SJacob Faibussowitsch { 510f17f7ee2SSatish Balay PetscFunctionBegin; 511f17f7ee2SSatish Balay MatCheckProduct(C, 1); 512ad540459SPierre Jolivet if (C->product->type == MATPRODUCT_AB || C->product->type == MATPRODUCT_AtB) C->ops->productsymbolic = MatProductSymbolic_H2OPUS; 5133ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 514f17f7ee2SSatish Balay } 515f17f7ee2SSatish Balay 516d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultKernel_H2OPUS(Mat A, Vec x, PetscScalar sy, Vec y, PetscBool trans) 517d71ae5a4SJacob Faibussowitsch { 518f17f7ee2SSatish Balay Mat_H2OPUS *h2opus = (Mat_H2OPUS *)A->data; 519f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 520f17f7ee2SSatish Balay h2opusHandle_t handle = h2opus->handle->handle; 521f17f7ee2SSatish Balay #else 522f17f7ee2SSatish Balay h2opusHandle_t handle = h2opus->handle; 523f17f7ee2SSatish Balay #endif 524f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 525f17f7ee2SSatish Balay PetscInt n; 526f17f7ee2SSatish Balay PetscScalar *xx, *yy, *uxx, *uyy; 527f17f7ee2SSatish Balay PetscMPIInt size; 528f17f7ee2SSatish Balay PetscBool usesf = (PetscBool)(h2opus->sf && !h2opus->nativemult); 529f17f7ee2SSatish Balay 530f17f7ee2SSatish Balay PetscFunctionBegin; 531f17f7ee2SSatish Balay HLibProfile::clear(); 532f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 533f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 534f17f7ee2SSatish Balay boundtocpu = A->boundtocpu; 535f17f7ee2SSatish Balay #endif 536ac530a7eSPierre Jolivet if (usesf) PetscCall(PetscSFGetGraph(h2opus->sf, NULL, &n, NULL, NULL)); 537ac530a7eSPierre Jolivet else n = A->rmap->n; 538f17f7ee2SSatish Balay if (boundtocpu) { 539f17f7ee2SSatish Balay PetscCall(VecGetArrayRead(x, (const PetscScalar **)&xx)); 540f17f7ee2SSatish Balay if (sy == 0.0) { 541f17f7ee2SSatish Balay PetscCall(VecGetArrayWrite(y, &yy)); 542f17f7ee2SSatish Balay } else { 543f17f7ee2SSatish Balay PetscCall(VecGetArray(y, &yy)); 544f17f7ee2SSatish Balay } 545f17f7ee2SSatish Balay if (usesf) { 546f17f7ee2SSatish Balay uxx = MatH2OpusGetThrustPointer(*h2opus->xx); 547f17f7ee2SSatish Balay uyy = MatH2OpusGetThrustPointer(*h2opus->yy); 548f17f7ee2SSatish Balay 549f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(h2opus->sf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 550f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(h2opus->sf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 551f17f7ee2SSatish Balay if (sy != 0.0) { 552f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(h2opus->sf, MPIU_SCALAR, yy, uyy, MPI_REPLACE)); 553f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(h2opus->sf, MPIU_SCALAR, yy, uyy, MPI_REPLACE)); 554f17f7ee2SSatish Balay } 555f17f7ee2SSatish Balay } else { 556f17f7ee2SSatish Balay uxx = xx; 557f17f7ee2SSatish Balay uyy = yy; 558f17f7ee2SSatish Balay } 559f17f7ee2SSatish Balay if (size > 1) { 560f17f7ee2SSatish Balay PetscCheck(h2opus->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed CPU matrix"); 561036e4bdcSSatish Balay PetscCheck(!trans || A->symmetric, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "MatMultTranspose not yet coded in parallel"); 562f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 563f17f7ee2SSatish Balay distributed_hgemv(/*trans ? H2Opus_Trans : H2Opus_NoTrans, */ h2opus->s, *h2opus->dist_hmatrix, uxx, n, sy, uyy, n, 1, h2opus->handle); 564f17f7ee2SSatish Balay #endif 565f17f7ee2SSatish Balay } else { 566f17f7ee2SSatish Balay PetscCheck(h2opus->hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 567f17f7ee2SSatish Balay hgemv(trans ? H2Opus_Trans : H2Opus_NoTrans, h2opus->s, *h2opus->hmatrix, uxx, n, sy, uyy, n, 1, handle); 568f17f7ee2SSatish Balay } 569f17f7ee2SSatish Balay PetscCall(VecRestoreArrayRead(x, (const PetscScalar **)&xx)); 570f17f7ee2SSatish Balay if (usesf) { 571f17f7ee2SSatish Balay PetscCall(PetscSFReduceBegin(h2opus->sf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 572f17f7ee2SSatish Balay PetscCall(PetscSFReduceEnd(h2opus->sf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 573f17f7ee2SSatish Balay } 574f17f7ee2SSatish Balay if (sy == 0.0) { 575f17f7ee2SSatish Balay PetscCall(VecRestoreArrayWrite(y, &yy)); 576f17f7ee2SSatish Balay } else { 577f17f7ee2SSatish Balay PetscCall(VecRestoreArray(y, &yy)); 578f17f7ee2SSatish Balay } 579f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 580f17f7ee2SSatish Balay } else { 581f17f7ee2SSatish Balay PetscCall(VecCUDAGetArrayRead(x, (const PetscScalar **)&xx)); 582f17f7ee2SSatish Balay if (sy == 0.0) { 583f17f7ee2SSatish Balay PetscCall(VecCUDAGetArrayWrite(y, &yy)); 584f17f7ee2SSatish Balay } else { 585f17f7ee2SSatish Balay PetscCall(VecCUDAGetArray(y, &yy)); 586f17f7ee2SSatish Balay } 587f17f7ee2SSatish Balay if (usesf) { 588f17f7ee2SSatish Balay uxx = MatH2OpusGetThrustPointer(*h2opus->xx_gpu); 589f17f7ee2SSatish Balay uyy = MatH2OpusGetThrustPointer(*h2opus->yy_gpu); 590f17f7ee2SSatish Balay 591f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(h2opus->sf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 592f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(h2opus->sf, MPIU_SCALAR, xx, uxx, MPI_REPLACE)); 593f17f7ee2SSatish Balay if (sy != 0.0) { 594f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(h2opus->sf, MPIU_SCALAR, yy, uyy, MPI_REPLACE)); 595f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(h2opus->sf, MPIU_SCALAR, yy, uyy, MPI_REPLACE)); 596f17f7ee2SSatish Balay } 597f17f7ee2SSatish Balay } else { 598f17f7ee2SSatish Balay uxx = xx; 599f17f7ee2SSatish Balay uyy = yy; 600f17f7ee2SSatish Balay } 601f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeBegin()); 602f17f7ee2SSatish Balay if (size > 1) { 603f17f7ee2SSatish Balay PetscCheck(h2opus->dist_hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed GPU matrix"); 604036e4bdcSSatish Balay PetscCheck(!trans || A->symmetric, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "MatMultTranspose not yet coded in parallel"); 605f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 606f17f7ee2SSatish Balay distributed_hgemv(/*trans ? H2Opus_Trans : H2Opus_NoTrans, */ h2opus->s, *h2opus->dist_hmatrix_gpu, uxx, n, sy, uyy, n, 1, h2opus->handle); 607f17f7ee2SSatish Balay #endif 608f17f7ee2SSatish Balay } else { 609f17f7ee2SSatish Balay PetscCheck(h2opus->hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 610f17f7ee2SSatish Balay hgemv(trans ? H2Opus_Trans : H2Opus_NoTrans, h2opus->s, *h2opus->hmatrix_gpu, uxx, n, sy, uyy, n, 1, handle); 611f17f7ee2SSatish Balay } 612f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeEnd()); 613f17f7ee2SSatish Balay PetscCall(VecCUDARestoreArrayRead(x, (const PetscScalar **)&xx)); 614f17f7ee2SSatish Balay if (usesf) { 615f17f7ee2SSatish Balay PetscCall(PetscSFReduceBegin(h2opus->sf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 616f17f7ee2SSatish Balay PetscCall(PetscSFReduceEnd(h2opus->sf, MPIU_SCALAR, uyy, yy, MPI_REPLACE)); 617f17f7ee2SSatish Balay } 618f17f7ee2SSatish Balay if (sy == 0.0) { 619f17f7ee2SSatish Balay PetscCall(VecCUDARestoreArrayWrite(y, &yy)); 620f17f7ee2SSatish Balay } else { 621f17f7ee2SSatish Balay PetscCall(VecCUDARestoreArray(y, &yy)); 622f17f7ee2SSatish Balay } 623f17f7ee2SSatish Balay #endif 624f17f7ee2SSatish Balay } 625f17f7ee2SSatish Balay { /* log flops */ 626f17f7ee2SSatish Balay double gops, time, perf, dev; 627f17f7ee2SSatish Balay HLibProfile::getHgemvPerf(gops, time, perf, dev); 628f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 629f17f7ee2SSatish Balay if (boundtocpu) { 630f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 631f17f7ee2SSatish Balay } else { 632f17f7ee2SSatish Balay PetscCall(PetscLogGpuFlops(1e9 * gops)); 633f17f7ee2SSatish Balay } 634f17f7ee2SSatish Balay #else 635f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 636f17f7ee2SSatish Balay #endif 637f17f7ee2SSatish Balay } 6383ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 639f17f7ee2SSatish Balay } 640f17f7ee2SSatish Balay 641d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultTranspose_H2OPUS(Mat A, Vec x, Vec y) 642d71ae5a4SJacob Faibussowitsch { 643f17f7ee2SSatish Balay PetscBool xiscuda, yiscuda; 644f17f7ee2SSatish Balay 645f17f7ee2SSatish Balay PetscFunctionBegin; 646f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)x, &xiscuda, VECSEQCUDA, VECMPICUDA, "")); 647f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)y, &yiscuda, VECSEQCUDA, VECMPICUDA, "")); 648f17f7ee2SSatish Balay PetscCall(MatH2OpusUpdateIfNeeded(A, !xiscuda || !yiscuda)); 649f17f7ee2SSatish Balay PetscCall(MatMultKernel_H2OPUS(A, x, 0.0, y, PETSC_TRUE)); 6503ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 651f17f7ee2SSatish Balay } 652f17f7ee2SSatish Balay 653d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMult_H2OPUS(Mat A, Vec x, Vec y) 654d71ae5a4SJacob Faibussowitsch { 655f17f7ee2SSatish Balay PetscBool xiscuda, yiscuda; 656f17f7ee2SSatish Balay 657f17f7ee2SSatish Balay PetscFunctionBegin; 658f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)x, &xiscuda, VECSEQCUDA, VECMPICUDA, "")); 659f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)y, &yiscuda, VECSEQCUDA, VECMPICUDA, "")); 660f17f7ee2SSatish Balay PetscCall(MatH2OpusUpdateIfNeeded(A, !xiscuda || !yiscuda)); 661f17f7ee2SSatish Balay PetscCall(MatMultKernel_H2OPUS(A, x, 0.0, y, PETSC_FALSE)); 6623ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 663f17f7ee2SSatish Balay } 664f17f7ee2SSatish Balay 665d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultTransposeAdd_H2OPUS(Mat A, Vec x, Vec y, Vec z) 666d71ae5a4SJacob Faibussowitsch { 667f17f7ee2SSatish Balay PetscBool xiscuda, ziscuda; 668f17f7ee2SSatish Balay 669f17f7ee2SSatish Balay PetscFunctionBegin; 670f17f7ee2SSatish Balay PetscCall(VecCopy(y, z)); 671f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)x, &xiscuda, VECSEQCUDA, VECMPICUDA, "")); 672f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)z, &ziscuda, VECSEQCUDA, VECMPICUDA, "")); 673f17f7ee2SSatish Balay PetscCall(MatH2OpusUpdateIfNeeded(A, !xiscuda || !ziscuda)); 674f17f7ee2SSatish Balay PetscCall(MatMultKernel_H2OPUS(A, x, 1.0, z, PETSC_TRUE)); 6753ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 676f17f7ee2SSatish Balay } 677f17f7ee2SSatish Balay 678d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatMultAdd_H2OPUS(Mat A, Vec x, Vec y, Vec z) 679d71ae5a4SJacob Faibussowitsch { 680f17f7ee2SSatish Balay PetscBool xiscuda, ziscuda; 681f17f7ee2SSatish Balay 682f17f7ee2SSatish Balay PetscFunctionBegin; 683f17f7ee2SSatish Balay PetscCall(VecCopy(y, z)); 684f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)x, &xiscuda, VECSEQCUDA, VECMPICUDA, "")); 685f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)z, &ziscuda, VECSEQCUDA, VECMPICUDA, "")); 686f17f7ee2SSatish Balay PetscCall(MatH2OpusUpdateIfNeeded(A, !xiscuda || !ziscuda)); 687f17f7ee2SSatish Balay PetscCall(MatMultKernel_H2OPUS(A, x, 1.0, z, PETSC_FALSE)); 6883ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 689f17f7ee2SSatish Balay } 690f17f7ee2SSatish Balay 691d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatScale_H2OPUS(Mat A, PetscScalar s) 692d71ae5a4SJacob Faibussowitsch { 693f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 694f17f7ee2SSatish Balay 695f17f7ee2SSatish Balay PetscFunctionBegin; 696f17f7ee2SSatish Balay a->s *= s; 6973ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 698f17f7ee2SSatish Balay } 699f17f7ee2SSatish Balay 700ce78bad3SBarry Smith static PetscErrorCode MatSetFromOptions_H2OPUS(Mat A, PetscOptionItems PetscOptionsObject) 701d71ae5a4SJacob Faibussowitsch { 702f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 703f17f7ee2SSatish Balay 704f17f7ee2SSatish Balay PetscFunctionBegin; 705036e4bdcSSatish Balay PetscOptionsHeadBegin(PetscOptionsObject, "H2OPUS options"); 706f17f7ee2SSatish Balay PetscCall(PetscOptionsInt("-mat_h2opus_leafsize", "Leaf size of cluster tree", NULL, a->leafsize, &a->leafsize, NULL)); 707f17f7ee2SSatish Balay PetscCall(PetscOptionsReal("-mat_h2opus_eta", "Admissibility condition tolerance", NULL, a->eta, &a->eta, NULL)); 708f17f7ee2SSatish Balay PetscCall(PetscOptionsInt("-mat_h2opus_order", "Basis order for off-diagonal sampling when constructed from kernel", NULL, a->basisord, &a->basisord, NULL)); 709f17f7ee2SSatish Balay PetscCall(PetscOptionsInt("-mat_h2opus_maxrank", "Maximum rank when constructed from matvecs", NULL, a->max_rank, &a->max_rank, NULL)); 710f17f7ee2SSatish Balay PetscCall(PetscOptionsInt("-mat_h2opus_samples", "Maximum number of samples to be taken concurrently when constructing from matvecs", NULL, a->bs, &a->bs, NULL)); 711aaa8cc7dSPierre Jolivet PetscCall(PetscOptionsInt("-mat_h2opus_normsamples", "Maximum number of samples to be when estimating norms", NULL, a->norm_max_samples, &a->norm_max_samples, NULL)); 712f17f7ee2SSatish Balay PetscCall(PetscOptionsReal("-mat_h2opus_rtol", "Relative tolerance for construction from sampling", NULL, a->rtol, &a->rtol, NULL)); 713f17f7ee2SSatish Balay PetscCall(PetscOptionsBool("-mat_h2opus_check", "Check error when constructing from sampling during MatAssemblyEnd()", NULL, a->check_construction, &a->check_construction, NULL)); 714f17f7ee2SSatish Balay PetscCall(PetscOptionsBool("-mat_h2opus_hara_verbose", "Verbose output from hara construction", NULL, a->hara_verbose, &a->hara_verbose, NULL)); 715036e4bdcSSatish Balay PetscCall(PetscOptionsBool("-mat_h2opus_resize", "Resize after compression", NULL, a->resize, &a->resize, NULL)); 716036e4bdcSSatish Balay PetscOptionsHeadEnd(); 7173ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 718f17f7ee2SSatish Balay } 719f17f7ee2SSatish Balay 7208434afd1SBarry Smith static PetscErrorCode MatH2OpusSetCoords_H2OPUS(Mat, PetscInt, const PetscReal[], PetscBool, MatH2OpusKernelFn *, void *); 721f17f7ee2SSatish Balay 722d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatH2OpusInferCoordinates_Private(Mat A) 723d71ae5a4SJacob Faibussowitsch { 724f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 725f17f7ee2SSatish Balay Vec c; 726f17f7ee2SSatish Balay PetscInt spacedim; 727f17f7ee2SSatish Balay const PetscScalar *coords; 728f17f7ee2SSatish Balay 729f17f7ee2SSatish Balay PetscFunctionBegin; 7303ba16761SJacob Faibussowitsch if (a->ptcloud) PetscFunctionReturn(PETSC_SUCCESS); 731f17f7ee2SSatish Balay PetscCall(PetscObjectQuery((PetscObject)A, "__math2opus_coords", (PetscObject *)&c)); 732f17f7ee2SSatish Balay if (!c && a->sampler) { 733f17f7ee2SSatish Balay Mat S = a->sampler->GetSamplingMat(); 734f17f7ee2SSatish Balay 735f17f7ee2SSatish Balay PetscCall(PetscObjectQuery((PetscObject)S, "__math2opus_coords", (PetscObject *)&c)); 736f17f7ee2SSatish Balay } 737f17f7ee2SSatish Balay if (!c) { 738f17f7ee2SSatish Balay PetscCall(MatH2OpusSetCoords_H2OPUS(A, -1, NULL, PETSC_FALSE, NULL, NULL)); 739f17f7ee2SSatish Balay } else { 740f17f7ee2SSatish Balay PetscCall(VecGetArrayRead(c, &coords)); 741f17f7ee2SSatish Balay PetscCall(VecGetBlockSize(c, &spacedim)); 742f17f7ee2SSatish Balay PetscCall(MatH2OpusSetCoords_H2OPUS(A, spacedim, coords, PETSC_FALSE, NULL, NULL)); 743f17f7ee2SSatish Balay PetscCall(VecRestoreArrayRead(c, &coords)); 744f17f7ee2SSatish Balay } 7453ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 746f17f7ee2SSatish Balay } 747f17f7ee2SSatish Balay 748d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatSetUpMultiply_H2OPUS(Mat A) 749d71ae5a4SJacob Faibussowitsch { 750f17f7ee2SSatish Balay MPI_Comm comm; 751f17f7ee2SSatish Balay PetscMPIInt size; 752f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 753f17f7ee2SSatish Balay PetscInt n = 0, *idx = NULL; 754f17f7ee2SSatish Balay int *iidx = NULL; 755f17f7ee2SSatish Balay PetscCopyMode own; 756f17f7ee2SSatish Balay PetscBool rid; 757f17f7ee2SSatish Balay 758f17f7ee2SSatish Balay PetscFunctionBegin; 7593ba16761SJacob Faibussowitsch if (a->multsetup) PetscFunctionReturn(PETSC_SUCCESS); 760f17f7ee2SSatish Balay if (a->sf) { /* MatDuplicate_H2OPUS takes reference to the SF */ 761f17f7ee2SSatish Balay PetscCall(PetscSFGetGraph(a->sf, NULL, &n, NULL, NULL)); 762f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 763f17f7ee2SSatish Balay a->xx_gpu = new thrust::device_vector<PetscScalar>(n); 764f17f7ee2SSatish Balay a->yy_gpu = new thrust::device_vector<PetscScalar>(n); 765f17f7ee2SSatish Balay a->xxs_gpu = 1; 766f17f7ee2SSatish Balay a->yys_gpu = 1; 767f17f7ee2SSatish Balay #endif 768f17f7ee2SSatish Balay a->xx = new thrust::host_vector<PetscScalar>(n); 769f17f7ee2SSatish Balay a->yy = new thrust::host_vector<PetscScalar>(n); 770f17f7ee2SSatish Balay a->xxs = 1; 771f17f7ee2SSatish Balay a->yys = 1; 772f17f7ee2SSatish Balay } else { 773f17f7ee2SSatish Balay IS is; 774f17f7ee2SSatish Balay PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 775f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(comm, &size)); 776f17f7ee2SSatish Balay if (!a->h2opus_indexmap) { 777f17f7ee2SSatish Balay if (size > 1) { 778f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed CPU matrix"); 779f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 780f17f7ee2SSatish Balay iidx = MatH2OpusGetThrustPointer(a->dist_hmatrix->basis_tree.basis_branch.index_map); 781f17f7ee2SSatish Balay n = a->dist_hmatrix->basis_tree.basis_branch.index_map.size(); 782f17f7ee2SSatish Balay #endif 783f17f7ee2SSatish Balay } else { 784f17f7ee2SSatish Balay iidx = MatH2OpusGetThrustPointer(a->hmatrix->u_basis_tree.index_map); 785f17f7ee2SSatish Balay n = a->hmatrix->u_basis_tree.index_map.size(); 786f17f7ee2SSatish Balay } 787f17f7ee2SSatish Balay 788f17f7ee2SSatish Balay if (PetscDefined(USE_64BIT_INDICES)) { 789f17f7ee2SSatish Balay PetscInt i; 790f17f7ee2SSatish Balay 791f17f7ee2SSatish Balay own = PETSC_OWN_POINTER; 792f17f7ee2SSatish Balay PetscCall(PetscMalloc1(n, &idx)); 793f17f7ee2SSatish Balay for (i = 0; i < n; i++) idx[i] = iidx[i]; 794f17f7ee2SSatish Balay } else { 795f17f7ee2SSatish Balay own = PETSC_COPY_VALUES; 796f17f7ee2SSatish Balay idx = (PetscInt *)iidx; 797f17f7ee2SSatish Balay } 798f17f7ee2SSatish Balay PetscCall(ISCreateGeneral(comm, n, idx, own, &is)); 799f17f7ee2SSatish Balay PetscCall(ISSetPermutation(is)); 800f17f7ee2SSatish Balay PetscCall(ISViewFromOptions(is, (PetscObject)A, "-mat_h2opus_indexmap_view")); 801f17f7ee2SSatish Balay a->h2opus_indexmap = is; 802f17f7ee2SSatish Balay } 803f17f7ee2SSatish Balay PetscCall(ISGetLocalSize(a->h2opus_indexmap, &n)); 804f17f7ee2SSatish Balay PetscCall(ISGetIndices(a->h2opus_indexmap, (const PetscInt **)&idx)); 805f17f7ee2SSatish Balay rid = (PetscBool)(n == A->rmap->n); 8065440e5dcSBarry Smith PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, &rid, 1, MPI_C_BOOL, MPI_LAND, comm)); 80748a46eb9SPierre Jolivet if (rid) PetscCall(ISIdentity(a->h2opus_indexmap, &rid)); 808f17f7ee2SSatish Balay if (!rid) { 809f17f7ee2SSatish Balay if (size > 1) { /* Parallel distribution may be different, save it here for fast path in MatMult (see MatH2OpusSetNativeMult) */ 810f17f7ee2SSatish Balay PetscCall(PetscLayoutCreate(comm, &a->h2opus_rmap)); 811f17f7ee2SSatish Balay PetscCall(PetscLayoutSetLocalSize(a->h2opus_rmap, n)); 812f17f7ee2SSatish Balay PetscCall(PetscLayoutSetUp(a->h2opus_rmap)); 813f17f7ee2SSatish Balay PetscCall(PetscLayoutReference(a->h2opus_rmap, &a->h2opus_cmap)); 814f17f7ee2SSatish Balay } 815f17f7ee2SSatish Balay PetscCall(PetscSFCreate(comm, &a->sf)); 816f17f7ee2SSatish Balay PetscCall(PetscSFSetGraphLayout(a->sf, A->rmap, n, NULL, PETSC_OWN_POINTER, idx)); 817036e4bdcSSatish Balay PetscCall(PetscSFSetUp(a->sf)); 818f17f7ee2SSatish Balay PetscCall(PetscSFViewFromOptions(a->sf, (PetscObject)A, "-mat_h2opus_sf_view")); 819f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 820f17f7ee2SSatish Balay a->xx_gpu = new thrust::device_vector<PetscScalar>(n); 821f17f7ee2SSatish Balay a->yy_gpu = new thrust::device_vector<PetscScalar>(n); 822f17f7ee2SSatish Balay a->xxs_gpu = 1; 823f17f7ee2SSatish Balay a->yys_gpu = 1; 824f17f7ee2SSatish Balay #endif 825f17f7ee2SSatish Balay a->xx = new thrust::host_vector<PetscScalar>(n); 826f17f7ee2SSatish Balay a->yy = new thrust::host_vector<PetscScalar>(n); 827f17f7ee2SSatish Balay a->xxs = 1; 828f17f7ee2SSatish Balay a->yys = 1; 829f17f7ee2SSatish Balay } 830f17f7ee2SSatish Balay PetscCall(ISRestoreIndices(a->h2opus_indexmap, (const PetscInt **)&idx)); 831f17f7ee2SSatish Balay } 832f17f7ee2SSatish Balay a->multsetup = PETSC_TRUE; 8333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 834f17f7ee2SSatish Balay } 835f17f7ee2SSatish Balay 836d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatAssemblyEnd_H2OPUS(Mat A, MatAssemblyType assemblytype) 837d71ae5a4SJacob Faibussowitsch { 838f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 839f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 840f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle->handle; 841f17f7ee2SSatish Balay #else 842f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle; 843f17f7ee2SSatish Balay #endif 844f17f7ee2SSatish Balay PetscBool kernel = PETSC_FALSE; 845f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 846f17f7ee2SSatish Balay PetscBool samplingdone = PETSC_FALSE; 847f17f7ee2SSatish Balay MPI_Comm comm; 848f17f7ee2SSatish Balay PetscMPIInt size; 849f17f7ee2SSatish Balay 850f17f7ee2SSatish Balay PetscFunctionBegin; 851f17f7ee2SSatish Balay PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 852036e4bdcSSatish Balay PetscCheck(A->rmap->n == A->cmap->n, PETSC_COMM_SELF, PETSC_ERR_SUP, "Different row and column local sizes are not supported"); 853036e4bdcSSatish Balay PetscCheck(A->rmap->N == A->cmap->N, comm, PETSC_ERR_SUP, "Rectangular matrices are not supported"); 854f17f7ee2SSatish Balay 855f17f7ee2SSatish Balay /* XXX */ 856f17f7ee2SSatish Balay a->leafsize = PetscMin(a->leafsize, PetscMin(A->rmap->N, A->cmap->N)); 857f17f7ee2SSatish Balay 858f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(comm, &size)); 859f17f7ee2SSatish Balay /* TODO REUSABILITY of geometric construction */ 860f17f7ee2SSatish Balay delete a->hmatrix; 861f17f7ee2SSatish Balay delete a->dist_hmatrix; 862f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 863f17f7ee2SSatish Balay delete a->hmatrix_gpu; 864f17f7ee2SSatish Balay delete a->dist_hmatrix_gpu; 865f17f7ee2SSatish Balay #endif 866f17f7ee2SSatish Balay a->orthogonal = PETSC_FALSE; 867f17f7ee2SSatish Balay 868f17f7ee2SSatish Balay /* TODO: other? */ 869f17f7ee2SSatish Balay H2OpusBoxCenterAdmissibility adm(a->eta); 870f17f7ee2SSatish Balay 871f17f7ee2SSatish Balay PetscCall(PetscLogEventBegin(MAT_H2Opus_Build, A, 0, 0, 0)); 872f17f7ee2SSatish Balay if (size > 1) { 873f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 874f17f7ee2SSatish Balay a->dist_hmatrix = new DistributedHMatrix(A->rmap->n /* ,A->symmetric */); 875f17f7ee2SSatish Balay #else 876f17f7ee2SSatish Balay a->dist_hmatrix = NULL; 877f17f7ee2SSatish Balay #endif 878b94d7dedSBarry Smith } else a->hmatrix = new HMatrix(A->rmap->n, A->symmetric == PETSC_BOOL3_TRUE); 879f17f7ee2SSatish Balay PetscCall(MatH2OpusInferCoordinates_Private(A)); 880f17f7ee2SSatish Balay PetscCheck(a->ptcloud, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Missing pointcloud"); 881f17f7ee2SSatish Balay if (a->kernel) { 882f17f7ee2SSatish Balay BoxEntryGen<PetscScalar, H2OPUS_HWTYPE_CPU, PetscFunctionGenerator<PetscScalar>> entry_gen(*a->kernel); 883f17f7ee2SSatish Balay if (size > 1) { 884f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed CPU matrix"); 885f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 886f17f7ee2SSatish Balay buildDistributedHMatrix(*a->dist_hmatrix, a->ptcloud, adm, entry_gen, a->leafsize, a->basisord, a->handle); 887f17f7ee2SSatish Balay #endif 888f17f7ee2SSatish Balay } else { 889f17f7ee2SSatish Balay buildHMatrix(*a->hmatrix, a->ptcloud, adm, entry_gen, a->leafsize, a->basisord); 890f17f7ee2SSatish Balay } 891f17f7ee2SSatish Balay kernel = PETSC_TRUE; 892f17f7ee2SSatish Balay } else { 893036e4bdcSSatish Balay PetscCheck(size <= 1, comm, PETSC_ERR_SUP, "Construction from sampling not supported in parallel"); 894f17f7ee2SSatish Balay buildHMatrixStructure(*a->hmatrix, a->ptcloud, a->leafsize, adm); 895f17f7ee2SSatish Balay } 896f17f7ee2SSatish Balay PetscCall(MatSetUpMultiply_H2OPUS(A)); 897f17f7ee2SSatish Balay 898f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 899f17f7ee2SSatish Balay boundtocpu = A->boundtocpu; 900f17f7ee2SSatish Balay if (!boundtocpu) { 901f17f7ee2SSatish Balay if (size > 1) { 902f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing distributed CPU matrix"); 903f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 904f17f7ee2SSatish Balay a->dist_hmatrix_gpu = new DistributedHMatrix_GPU(*a->dist_hmatrix); 905f17f7ee2SSatish Balay #endif 906f17f7ee2SSatish Balay } else { 907f17f7ee2SSatish Balay a->hmatrix_gpu = new HMatrix_GPU(*a->hmatrix); 908f17f7ee2SSatish Balay } 909f17f7ee2SSatish Balay } 910f17f7ee2SSatish Balay #endif 911f17f7ee2SSatish Balay if (size == 1) { 912f17f7ee2SSatish Balay if (!kernel && a->sampler && a->sampler->GetSamplingMat()) { 913f17f7ee2SSatish Balay PetscReal Anorm; 914f17f7ee2SSatish Balay bool verbose; 915f17f7ee2SSatish Balay 916f17f7ee2SSatish Balay PetscCall(PetscOptionsGetBool(((PetscObject)A)->options, ((PetscObject)A)->prefix, "-mat_h2opus_hara_verbose", &a->hara_verbose, NULL)); 917f17f7ee2SSatish Balay verbose = a->hara_verbose; 918f17f7ee2SSatish Balay PetscCall(MatApproximateNorm_Private(a->sampler->GetSamplingMat(), NORM_2, a->norm_max_samples, &Anorm)); 919f17f7ee2SSatish Balay if (a->hara_verbose) PetscCall(PetscPrintf(PETSC_COMM_SELF, "Sampling uses max rank %d, tol %g (%g*%g), %s samples %d\n", a->max_rank, a->rtol * Anorm, a->rtol, Anorm, boundtocpu ? "CPU" : "GPU", a->bs)); 920ad540459SPierre Jolivet if (a->sf && !a->nativemult) a->sampler->SetIndexMap(a->hmatrix->u_basis_tree.index_map.size(), a->hmatrix->u_basis_tree.index_map.data()); 921f17f7ee2SSatish Balay a->sampler->SetStream(handle->getMainStream()); 922f17f7ee2SSatish Balay if (boundtocpu) { 923f17f7ee2SSatish Balay a->sampler->SetGPUSampling(false); 924f17f7ee2SSatish Balay hara(a->sampler, *a->hmatrix, a->max_rank, 10 /* TODO */, a->rtol * Anorm, a->bs, handle, verbose); 925f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 926f17f7ee2SSatish Balay } else { 927f17f7ee2SSatish Balay a->sampler->SetGPUSampling(true); 928f17f7ee2SSatish Balay hara(a->sampler, *a->hmatrix_gpu, a->max_rank, 10 /* TODO */, a->rtol * Anorm, a->bs, handle, verbose); 929f17f7ee2SSatish Balay #endif 930f17f7ee2SSatish Balay } 931f17f7ee2SSatish Balay samplingdone = PETSC_TRUE; 932f17f7ee2SSatish Balay } 933f17f7ee2SSatish Balay } 934f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 935f17f7ee2SSatish Balay if (!boundtocpu) { 936f17f7ee2SSatish Balay delete a->hmatrix; 937f17f7ee2SSatish Balay delete a->dist_hmatrix; 938f17f7ee2SSatish Balay a->hmatrix = NULL; 939f17f7ee2SSatish Balay a->dist_hmatrix = NULL; 940f17f7ee2SSatish Balay } 941f17f7ee2SSatish Balay A->offloadmask = boundtocpu ? PETSC_OFFLOAD_CPU : PETSC_OFFLOAD_GPU; 942f17f7ee2SSatish Balay #endif 943f17f7ee2SSatish Balay PetscCall(PetscLogEventEnd(MAT_H2Opus_Build, A, 0, 0, 0)); 944f17f7ee2SSatish Balay 945f17f7ee2SSatish Balay if (!a->s) a->s = 1.0; 946f17f7ee2SSatish Balay A->assembled = PETSC_TRUE; 947f17f7ee2SSatish Balay 948f17f7ee2SSatish Balay if (samplingdone) { 949f17f7ee2SSatish Balay PetscBool check = a->check_construction; 950f17f7ee2SSatish Balay PetscBool checke = PETSC_FALSE; 951f17f7ee2SSatish Balay 952f17f7ee2SSatish Balay PetscCall(PetscOptionsGetBool(((PetscObject)A)->options, ((PetscObject)A)->prefix, "-mat_h2opus_check", &check, NULL)); 953f17f7ee2SSatish Balay PetscCall(PetscOptionsGetBool(((PetscObject)A)->options, ((PetscObject)A)->prefix, "-mat_h2opus_check_explicit", &checke, NULL)); 954f17f7ee2SSatish Balay if (check) { 955f17f7ee2SSatish Balay Mat E, Ae; 956f17f7ee2SSatish Balay PetscReal n1, ni, n2; 957f17f7ee2SSatish Balay PetscReal n1A, niA, n2A; 95857d50842SBarry Smith PetscErrorCodeFn *normfunc; 959f17f7ee2SSatish Balay 960f17f7ee2SSatish Balay Ae = a->sampler->GetSamplingMat(); 961f17f7ee2SSatish Balay PetscCall(MatConvert(A, MATSHELL, MAT_INITIAL_MATRIX, &E)); 96257d50842SBarry Smith PetscCall(MatShellSetOperation(E, MATOP_NORM, (PetscErrorCodeFn *)MatNorm_H2OPUS)); 963f17f7ee2SSatish Balay PetscCall(MatAXPY(E, -1.0, Ae, DIFFERENT_NONZERO_PATTERN)); 964f17f7ee2SSatish Balay PetscCall(MatNorm(E, NORM_1, &n1)); 965f17f7ee2SSatish Balay PetscCall(MatNorm(E, NORM_INFINITY, &ni)); 966f17f7ee2SSatish Balay PetscCall(MatNorm(E, NORM_2, &n2)); 967f17f7ee2SSatish Balay if (checke) { 968f17f7ee2SSatish Balay Mat eA, eE, eAe; 969f17f7ee2SSatish Balay 970f17f7ee2SSatish Balay PetscCall(MatComputeOperator(A, MATAIJ, &eA)); 971f17f7ee2SSatish Balay PetscCall(MatComputeOperator(E, MATAIJ, &eE)); 972f17f7ee2SSatish Balay PetscCall(MatComputeOperator(Ae, MATAIJ, &eAe)); 9732ce66baaSPierre Jolivet PetscCall(MatFilter(eA, PETSC_SMALL, PETSC_FALSE, PETSC_FALSE)); 9742ce66baaSPierre Jolivet PetscCall(MatFilter(eE, PETSC_SMALL, PETSC_FALSE, PETSC_FALSE)); 9752ce66baaSPierre Jolivet PetscCall(MatFilter(eAe, PETSC_SMALL, PETSC_FALSE, PETSC_FALSE)); 976f17f7ee2SSatish Balay PetscCall(PetscObjectSetName((PetscObject)eA, "H2Mat")); 977f17f7ee2SSatish Balay PetscCall(MatView(eA, NULL)); 978f17f7ee2SSatish Balay PetscCall(PetscObjectSetName((PetscObject)eAe, "S")); 979f17f7ee2SSatish Balay PetscCall(MatView(eAe, NULL)); 980f17f7ee2SSatish Balay PetscCall(PetscObjectSetName((PetscObject)eE, "H2Mat - S")); 981f17f7ee2SSatish Balay PetscCall(MatView(eE, NULL)); 982f17f7ee2SSatish Balay PetscCall(MatDestroy(&eA)); 983f17f7ee2SSatish Balay PetscCall(MatDestroy(&eE)); 984f17f7ee2SSatish Balay PetscCall(MatDestroy(&eAe)); 985f17f7ee2SSatish Balay } 986f17f7ee2SSatish Balay 987f17f7ee2SSatish Balay PetscCall(MatGetOperation(Ae, MATOP_NORM, &normfunc)); 98857d50842SBarry Smith PetscCall(MatSetOperation(Ae, MATOP_NORM, (PetscErrorCodeFn *)MatNorm_H2OPUS)); 989f17f7ee2SSatish Balay PetscCall(MatNorm(Ae, NORM_1, &n1A)); 990f17f7ee2SSatish Balay PetscCall(MatNorm(Ae, NORM_INFINITY, &niA)); 991f17f7ee2SSatish Balay PetscCall(MatNorm(Ae, NORM_2, &n2A)); 992f17f7ee2SSatish Balay n1A = PetscMax(n1A, PETSC_SMALL); 993f17f7ee2SSatish Balay n2A = PetscMax(n2A, PETSC_SMALL); 994f17f7ee2SSatish Balay niA = PetscMax(niA, PETSC_SMALL); 995f17f7ee2SSatish Balay PetscCall(MatSetOperation(Ae, MATOP_NORM, normfunc)); 996f17f7ee2SSatish Balay PetscCall(PetscPrintf(PetscObjectComm((PetscObject)A), "MATH2OPUS construction errors: NORM_1 %g, NORM_INFINITY %g, NORM_2 %g (%g %g %g)\n", (double)n1, (double)ni, (double)n2, (double)(n1 / n1A), (double)(ni / niA), (double)(n2 / n2A))); 997f17f7ee2SSatish Balay PetscCall(MatDestroy(&E)); 998f17f7ee2SSatish Balay } 999f17f7ee2SSatish Balay a->sampler->SetSamplingMat(NULL); 1000f17f7ee2SSatish Balay } 10013ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1002f17f7ee2SSatish Balay } 1003f17f7ee2SSatish Balay 1004d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatZeroEntries_H2OPUS(Mat A) 1005d71ae5a4SJacob Faibussowitsch { 1006f17f7ee2SSatish Balay PetscMPIInt size; 1007f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1008f17f7ee2SSatish Balay 1009f17f7ee2SSatish Balay PetscFunctionBegin; 1010f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1011036e4bdcSSatish Balay PetscCheck(size <= 1, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not yet supported"); 1012f17f7ee2SSatish Balay a->hmatrix->clearData(); 1013f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1014f17f7ee2SSatish Balay if (a->hmatrix_gpu) a->hmatrix_gpu->clearData(); 1015f17f7ee2SSatish Balay #endif 10163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1017f17f7ee2SSatish Balay } 1018f17f7ee2SSatish Balay 1019d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatDuplicate_H2OPUS(Mat B, MatDuplicateOption op, Mat *nA) 1020d71ae5a4SJacob Faibussowitsch { 1021f17f7ee2SSatish Balay Mat A; 1022f17f7ee2SSatish Balay Mat_H2OPUS *a, *b = (Mat_H2OPUS *)B->data; 1023*fc2fb351SPierre Jolivet PetscBool iscpu = PetscDefined(H2OPUS_USE_GPU) ? PETSC_FALSE : PETSC_TRUE; 1024f17f7ee2SSatish Balay MPI_Comm comm; 1025f17f7ee2SSatish Balay 1026f17f7ee2SSatish Balay PetscFunctionBegin; 1027f17f7ee2SSatish Balay PetscCall(PetscObjectGetComm((PetscObject)B, &comm)); 1028f17f7ee2SSatish Balay PetscCall(MatCreate(comm, &A)); 1029f17f7ee2SSatish Balay PetscCall(MatSetSizes(A, B->rmap->n, B->cmap->n, B->rmap->N, B->cmap->N)); 1030f17f7ee2SSatish Balay PetscCall(MatSetType(A, MATH2OPUS)); 1031f17f7ee2SSatish Balay PetscCall(MatPropagateSymmetryOptions(B, A)); 1032f17f7ee2SSatish Balay a = (Mat_H2OPUS *)A->data; 1033f17f7ee2SSatish Balay 1034f17f7ee2SSatish Balay a->eta = b->eta; 1035f17f7ee2SSatish Balay a->leafsize = b->leafsize; 1036f17f7ee2SSatish Balay a->basisord = b->basisord; 1037f17f7ee2SSatish Balay a->max_rank = b->max_rank; 1038f17f7ee2SSatish Balay a->bs = b->bs; 1039f17f7ee2SSatish Balay a->rtol = b->rtol; 1040f17f7ee2SSatish Balay a->norm_max_samples = b->norm_max_samples; 1041f17f7ee2SSatish Balay if (op == MAT_COPY_VALUES) a->s = b->s; 1042f17f7ee2SSatish Balay 1043f17f7ee2SSatish Balay a->ptcloud = new PetscPointCloud<PetscReal>(*b->ptcloud); 1044f17f7ee2SSatish Balay if (op == MAT_COPY_VALUES && b->kernel) a->kernel = new PetscFunctionGenerator<PetscScalar>(*b->kernel); 1045f17f7ee2SSatish Balay 1046f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1047ad540459SPierre Jolivet if (b->dist_hmatrix) a->dist_hmatrix = new DistributedHMatrix(*b->dist_hmatrix); 1048f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1049ad540459SPierre Jolivet if (b->dist_hmatrix_gpu) a->dist_hmatrix_gpu = new DistributedHMatrix_GPU(*b->dist_hmatrix_gpu); 1050f17f7ee2SSatish Balay #endif 1051f17f7ee2SSatish Balay #endif 1052f17f7ee2SSatish Balay if (b->hmatrix) { 1053f17f7ee2SSatish Balay a->hmatrix = new HMatrix(*b->hmatrix); 1054f17f7ee2SSatish Balay if (op == MAT_DO_NOT_COPY_VALUES) a->hmatrix->clearData(); 1055f17f7ee2SSatish Balay } 1056f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1057f17f7ee2SSatish Balay if (b->hmatrix_gpu) { 1058f17f7ee2SSatish Balay a->hmatrix_gpu = new HMatrix_GPU(*b->hmatrix_gpu); 1059f17f7ee2SSatish Balay if (op == MAT_DO_NOT_COPY_VALUES) a->hmatrix_gpu->clearData(); 1060f17f7ee2SSatish Balay } 1061f17f7ee2SSatish Balay #endif 1062f17f7ee2SSatish Balay if (b->sf) { 1063f17f7ee2SSatish Balay PetscCall(PetscObjectReference((PetscObject)b->sf)); 1064f17f7ee2SSatish Balay a->sf = b->sf; 1065f17f7ee2SSatish Balay } 1066f17f7ee2SSatish Balay if (b->h2opus_indexmap) { 1067f17f7ee2SSatish Balay PetscCall(PetscObjectReference((PetscObject)b->h2opus_indexmap)); 1068f17f7ee2SSatish Balay a->h2opus_indexmap = b->h2opus_indexmap; 1069f17f7ee2SSatish Balay } 1070f17f7ee2SSatish Balay 1071f17f7ee2SSatish Balay PetscCall(MatSetUp(A)); 1072f17f7ee2SSatish Balay PetscCall(MatSetUpMultiply_H2OPUS(A)); 1073f17f7ee2SSatish Balay if (op == MAT_COPY_VALUES) { 1074f17f7ee2SSatish Balay A->assembled = PETSC_TRUE; 1075f17f7ee2SSatish Balay a->orthogonal = b->orthogonal; 1076f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1077f17f7ee2SSatish Balay A->offloadmask = B->offloadmask; 1078f17f7ee2SSatish Balay #endif 1079f17f7ee2SSatish Balay } 1080f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1081f17f7ee2SSatish Balay iscpu = B->boundtocpu; 1082f17f7ee2SSatish Balay #endif 1083f17f7ee2SSatish Balay PetscCall(MatBindToCPU(A, iscpu)); 1084f17f7ee2SSatish Balay 1085f17f7ee2SSatish Balay *nA = A; 10863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1087f17f7ee2SSatish Balay } 1088f17f7ee2SSatish Balay 1089d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatView_H2OPUS(Mat A, PetscViewer view) 1090d71ae5a4SJacob Faibussowitsch { 1091f17f7ee2SSatish Balay Mat_H2OPUS *h2opus = (Mat_H2OPUS *)A->data; 1092036e4bdcSSatish Balay PetscBool isascii, vieweps; 1093f17f7ee2SSatish Balay PetscMPIInt size; 1094f17f7ee2SSatish Balay PetscViewerFormat format; 1095f17f7ee2SSatish Balay 1096f17f7ee2SSatish Balay PetscFunctionBegin; 1097f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)view, PETSCVIEWERASCII, &isascii)); 1098f17f7ee2SSatish Balay PetscCall(PetscViewerGetFormat(view, &format)); 1099f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1100f17f7ee2SSatish Balay if (isascii) { 1101f17f7ee2SSatish Balay if (format == PETSC_VIEWER_ASCII_MATLAB) { 1102f17f7ee2SSatish Balay if (size == 1) { 1103f17f7ee2SSatish Balay FILE *fp; 1104f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIGetPointer(view, &fp)); 1105f17f7ee2SSatish Balay dumpHMatrix(*h2opus->hmatrix, 6, fp); 1106f17f7ee2SSatish Balay } 1107f17f7ee2SSatish Balay } else { 1108f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " H-Matrix constructed from %s\n", h2opus->kernel ? "Kernel" : "Mat")); 1109f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " PointCloud dim %" PetscInt_FMT "\n", h2opus->ptcloud ? h2opus->ptcloud->getDimension() : 0)); 1110f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Admissibility parameters: leaf size %" PetscInt_FMT ", eta %g\n", h2opus->leafsize, (double)h2opus->eta)); 1111f17f7ee2SSatish Balay if (!h2opus->kernel) { 1112f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Sampling parameters: max_rank %" PetscInt_FMT ", samples %" PetscInt_FMT ", tolerance %g\n", h2opus->max_rank, h2opus->bs, (double)h2opus->rtol)); 1113f17f7ee2SSatish Balay } else { 11144cf0e950SBarry Smith PetscCall(PetscViewerASCIIPrintf(view, " Off-diagonal blocks approximation order %" PetscInt_FMT "\n", h2opus->basisord)); 1115f17f7ee2SSatish Balay } 1116f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Number of samples for norms %" PetscInt_FMT "\n", h2opus->norm_max_samples)); 1117f17f7ee2SSatish Balay if (size == 1) { 1118f17f7ee2SSatish Balay double dense_mem_cpu = h2opus->hmatrix ? h2opus->hmatrix->getDenseMemoryUsage() : 0; 1119f17f7ee2SSatish Balay double low_rank_cpu = h2opus->hmatrix ? h2opus->hmatrix->getLowRankMemoryUsage() : 0; 1120f17f7ee2SSatish Balay #if defined(PETSC_HAVE_CUDA) 1121f17f7ee2SSatish Balay double dense_mem_gpu = h2opus->hmatrix_gpu ? h2opus->hmatrix_gpu->getDenseMemoryUsage() : 0; 1122f17f7ee2SSatish Balay double low_rank_gpu = h2opus->hmatrix_gpu ? h2opus->hmatrix_gpu->getLowRankMemoryUsage() : 0; 1123f17f7ee2SSatish Balay #endif 1124f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Memory consumption GB (CPU): %g (dense) %g (low rank) %g (total)\n", dense_mem_cpu, low_rank_cpu, low_rank_cpu + dense_mem_cpu)); 1125f17f7ee2SSatish Balay #if defined(PETSC_HAVE_CUDA) 1126f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Memory consumption GB (GPU): %g (dense) %g (low rank) %g (total)\n", dense_mem_gpu, low_rank_gpu, low_rank_gpu + dense_mem_gpu)); 1127f17f7ee2SSatish Balay #endif 1128f17f7ee2SSatish Balay } else { 1129f17f7ee2SSatish Balay #if defined(PETSC_HAVE_CUDA) 1130f17f7ee2SSatish Balay double matrix_mem[4] = {0., 0., 0., 0.}; 1131f17f7ee2SSatish Balay PetscMPIInt rsize = 4; 1132f17f7ee2SSatish Balay #else 1133f17f7ee2SSatish Balay double matrix_mem[2] = {0., 0.}; 1134f17f7ee2SSatish Balay PetscMPIInt rsize = 2; 1135f17f7ee2SSatish Balay #endif 1136f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1137f17f7ee2SSatish Balay matrix_mem[0] = h2opus->dist_hmatrix ? h2opus->dist_hmatrix->getLocalDenseMemoryUsage() : 0; 1138f17f7ee2SSatish Balay matrix_mem[1] = h2opus->dist_hmatrix ? h2opus->dist_hmatrix->getLocalLowRankMemoryUsage() : 0; 1139f17f7ee2SSatish Balay #if defined(PETSC_HAVE_CUDA) 1140f17f7ee2SSatish Balay matrix_mem[2] = h2opus->dist_hmatrix_gpu ? h2opus->dist_hmatrix_gpu->getLocalDenseMemoryUsage() : 0; 1141f17f7ee2SSatish Balay matrix_mem[3] = h2opus->dist_hmatrix_gpu ? h2opus->dist_hmatrix_gpu->getLocalLowRankMemoryUsage() : 0; 1142f17f7ee2SSatish Balay #endif 1143f17f7ee2SSatish Balay #endif 1144462c564dSBarry Smith PetscCallMPI(MPIU_Allreduce(MPI_IN_PLACE, matrix_mem, rsize, MPI_DOUBLE_PRECISION, MPI_SUM, PetscObjectComm((PetscObject)A))); 1145f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Memory consumption GB (CPU): %g (dense) %g (low rank) %g (total)\n", matrix_mem[0], matrix_mem[1], matrix_mem[0] + matrix_mem[1])); 1146f17f7ee2SSatish Balay #if defined(PETSC_HAVE_CUDA) 1147f17f7ee2SSatish Balay PetscCall(PetscViewerASCIIPrintf(view, " Memory consumption GB (GPU): %g (dense) %g (low rank) %g (total)\n", matrix_mem[2], matrix_mem[3], matrix_mem[2] + matrix_mem[3])); 1148f17f7ee2SSatish Balay #endif 1149f17f7ee2SSatish Balay } 1150f17f7ee2SSatish Balay } 1151f17f7ee2SSatish Balay } 1152036e4bdcSSatish Balay vieweps = PETSC_FALSE; 1153036e4bdcSSatish Balay PetscCall(PetscOptionsGetBool(((PetscObject)A)->options, ((PetscObject)A)->prefix, "-mat_h2opus_vieweps", &vieweps, NULL)); 1154036e4bdcSSatish Balay if (vieweps) { 1155f17f7ee2SSatish Balay char filename[256]; 1156f17f7ee2SSatish Balay const char *name; 1157f17f7ee2SSatish Balay 1158f17f7ee2SSatish Balay PetscCall(PetscObjectGetName((PetscObject)A, &name)); 1159f17f7ee2SSatish Balay PetscCall(PetscSNPrintf(filename, sizeof(filename), "%s_structure.eps", name)); 1160036e4bdcSSatish Balay PetscCall(PetscOptionsGetString(((PetscObject)A)->options, ((PetscObject)A)->prefix, "-mat_h2opus_vieweps_filename", filename, sizeof(filename), NULL)); 1161f17f7ee2SSatish Balay outputEps(*h2opus->hmatrix, filename); 1162f17f7ee2SSatish Balay } 11633ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1164f17f7ee2SSatish Balay } 1165f17f7ee2SSatish Balay 11668434afd1SBarry Smith static PetscErrorCode MatH2OpusSetCoords_H2OPUS(Mat A, PetscInt spacedim, const PetscReal coords[], PetscBool cdist, MatH2OpusKernelFn *kernel, void *kernelctx) 1167d71ae5a4SJacob Faibussowitsch { 1168f17f7ee2SSatish Balay Mat_H2OPUS *h2opus = (Mat_H2OPUS *)A->data; 1169f17f7ee2SSatish Balay PetscReal *gcoords; 1170f17f7ee2SSatish Balay PetscInt N; 1171f17f7ee2SSatish Balay MPI_Comm comm; 1172f17f7ee2SSatish Balay PetscMPIInt size; 1173f17f7ee2SSatish Balay PetscBool cong; 1174f17f7ee2SSatish Balay 1175f17f7ee2SSatish Balay PetscFunctionBegin; 1176f17f7ee2SSatish Balay PetscCall(PetscLayoutSetUp(A->rmap)); 1177f17f7ee2SSatish Balay PetscCall(PetscLayoutSetUp(A->cmap)); 1178f17f7ee2SSatish Balay PetscCall(PetscObjectGetComm((PetscObject)A, &comm)); 1179f17f7ee2SSatish Balay PetscCall(MatHasCongruentLayouts(A, &cong)); 1180f17f7ee2SSatish Balay PetscCheck(cong, comm, PETSC_ERR_SUP, "Only for square matrices with congruent layouts"); 1181f17f7ee2SSatish Balay N = A->rmap->N; 1182f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(comm, &size)); 1183f17f7ee2SSatish Balay if (spacedim > 0 && size > 1 && cdist) { 1184f17f7ee2SSatish Balay PetscSF sf; 1185f17f7ee2SSatish Balay MPI_Datatype dtype; 1186f17f7ee2SSatish Balay 1187f17f7ee2SSatish Balay PetscCallMPI(MPI_Type_contiguous(spacedim, MPIU_REAL, &dtype)); 1188f17f7ee2SSatish Balay PetscCallMPI(MPI_Type_commit(&dtype)); 1189f17f7ee2SSatish Balay 1190f17f7ee2SSatish Balay PetscCall(PetscSFCreate(comm, &sf)); 1191f17f7ee2SSatish Balay PetscCall(PetscSFSetGraphWithPattern(sf, A->rmap, PETSCSF_PATTERN_ALLGATHER)); 1192f17f7ee2SSatish Balay PetscCall(PetscMalloc1(spacedim * N, &gcoords)); 1193f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(sf, dtype, coords, gcoords, MPI_REPLACE)); 1194f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(sf, dtype, coords, gcoords, MPI_REPLACE)); 1195f17f7ee2SSatish Balay PetscCall(PetscSFDestroy(&sf)); 1196f17f7ee2SSatish Balay PetscCallMPI(MPI_Type_free(&dtype)); 1197f17f7ee2SSatish Balay } else gcoords = (PetscReal *)coords; 1198f17f7ee2SSatish Balay 1199f17f7ee2SSatish Balay delete h2opus->ptcloud; 1200f17f7ee2SSatish Balay delete h2opus->kernel; 1201f17f7ee2SSatish Balay h2opus->ptcloud = new PetscPointCloud<PetscReal>(spacedim, N, gcoords); 1202f17f7ee2SSatish Balay if (kernel) h2opus->kernel = new PetscFunctionGenerator<PetscScalar>(kernel, spacedim, kernelctx); 1203f17f7ee2SSatish Balay if (gcoords != coords) PetscCall(PetscFree(gcoords)); 1204f17f7ee2SSatish Balay A->preallocated = PETSC_TRUE; 12053ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1206f17f7ee2SSatish Balay } 1207f17f7ee2SSatish Balay 1208f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1209d71ae5a4SJacob Faibussowitsch static PetscErrorCode MatBindToCPU_H2OPUS(Mat A, PetscBool flg) 1210d71ae5a4SJacob Faibussowitsch { 1211f17f7ee2SSatish Balay PetscMPIInt size; 1212f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1213f17f7ee2SSatish Balay 1214f17f7ee2SSatish Balay PetscFunctionBegin; 1215f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1216f17f7ee2SSatish Balay if (flg && A->offloadmask == PETSC_OFFLOAD_GPU) { 1217f17f7ee2SSatish Balay if (size > 1) { 1218f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1219f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1220f17f7ee2SSatish Balay if (!a->dist_hmatrix) a->dist_hmatrix = new DistributedHMatrix(*a->dist_hmatrix_gpu); 1221f17f7ee2SSatish Balay else *a->dist_hmatrix = *a->dist_hmatrix_gpu; 1222f17f7ee2SSatish Balay #endif 1223f17f7ee2SSatish Balay } else { 1224f17f7ee2SSatish Balay PetscCheck(a->hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1225f17f7ee2SSatish Balay if (!a->hmatrix) a->hmatrix = new HMatrix(*a->hmatrix_gpu); 1226f17f7ee2SSatish Balay else *a->hmatrix = *a->hmatrix_gpu; 1227f17f7ee2SSatish Balay } 1228f17f7ee2SSatish Balay delete a->hmatrix_gpu; 1229f17f7ee2SSatish Balay delete a->dist_hmatrix_gpu; 1230f17f7ee2SSatish Balay a->hmatrix_gpu = NULL; 1231f17f7ee2SSatish Balay a->dist_hmatrix_gpu = NULL; 1232f17f7ee2SSatish Balay A->offloadmask = PETSC_OFFLOAD_CPU; 1233f17f7ee2SSatish Balay } else if (!flg && A->offloadmask == PETSC_OFFLOAD_CPU) { 1234f17f7ee2SSatish Balay if (size > 1) { 1235f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1236f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1237f17f7ee2SSatish Balay if (!a->dist_hmatrix_gpu) a->dist_hmatrix_gpu = new DistributedHMatrix_GPU(*a->dist_hmatrix); 1238f17f7ee2SSatish Balay else *a->dist_hmatrix_gpu = *a->dist_hmatrix; 1239f17f7ee2SSatish Balay #endif 1240f17f7ee2SSatish Balay } else { 1241f17f7ee2SSatish Balay PetscCheck(a->hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1242f17f7ee2SSatish Balay if (!a->hmatrix_gpu) a->hmatrix_gpu = new HMatrix_GPU(*a->hmatrix); 1243f17f7ee2SSatish Balay else *a->hmatrix_gpu = *a->hmatrix; 1244f17f7ee2SSatish Balay } 1245f17f7ee2SSatish Balay delete a->hmatrix; 1246f17f7ee2SSatish Balay delete a->dist_hmatrix; 1247f17f7ee2SSatish Balay a->hmatrix = NULL; 1248f17f7ee2SSatish Balay a->dist_hmatrix = NULL; 1249f17f7ee2SSatish Balay A->offloadmask = PETSC_OFFLOAD_GPU; 1250f17f7ee2SSatish Balay } 1251f17f7ee2SSatish Balay PetscCall(PetscFree(A->defaultvectype)); 1252f17f7ee2SSatish Balay if (!flg) { 1253f17f7ee2SSatish Balay PetscCall(PetscStrallocpy(VECCUDA, &A->defaultvectype)); 1254f17f7ee2SSatish Balay } else { 1255f17f7ee2SSatish Balay PetscCall(PetscStrallocpy(VECSTANDARD, &A->defaultvectype)); 1256f17f7ee2SSatish Balay } 1257f17f7ee2SSatish Balay A->boundtocpu = flg; 12583ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1259f17f7ee2SSatish Balay } 1260f17f7ee2SSatish Balay #endif 1261f17f7ee2SSatish Balay 1262f17f7ee2SSatish Balay /*MC 12631d27aa22SBarry Smith MATH2OPUS = "h2opus" - A matrix type for hierarchical matrices using the H2Opus package {cite}`zampinibouakaramturkiyyahkniokeyes2022`. 1264f17f7ee2SSatish Balay 12652ef1f0ffSBarry Smith Options Database Key: 12662ef1f0ffSBarry Smith . -mat_type h2opus - matrix type to "h2opus" 12672ef1f0ffSBarry Smith 12682ef1f0ffSBarry Smith Level: beginner 1269f17f7ee2SSatish Balay 1270f17f7ee2SSatish Balay Notes: 12711d27aa22SBarry Smith H2Opus implements hierarchical matrices in the $H^2$ flavour. It supports CPU or NVIDIA GPUs. 127211a5261eSBarry Smith 12732ef1f0ffSBarry Smith For CPU only builds, use `./configure --download-h2opus --download-thrust` to install PETSc to use H2Opus. 12742ef1f0ffSBarry Smith In order to run on NVIDIA GPUs, use `./configure --download-h2opus --download-magma --download-kblas`. 1275f17f7ee2SSatish Balay 12761cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MATH2OPUS`, `MATHTOOL`, `MATDENSE`, `MatCreateH2OpusFromKernel()`, `MatCreateH2OpusFromMat()` 1277f17f7ee2SSatish Balay M*/ 1278d71ae5a4SJacob Faibussowitsch PETSC_EXTERN PetscErrorCode MatCreate_H2OPUS(Mat A) 1279d71ae5a4SJacob Faibussowitsch { 1280f17f7ee2SSatish Balay Mat_H2OPUS *a; 1281f17f7ee2SSatish Balay PetscMPIInt size; 1282f17f7ee2SSatish Balay 1283f17f7ee2SSatish Balay PetscFunctionBegin; 1284f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1285f17f7ee2SSatish Balay PetscCall(PetscDeviceInitialize(PETSC_DEVICE_CUDA)); 1286f17f7ee2SSatish Balay #endif 12874dfa11a4SJacob Faibussowitsch PetscCall(PetscNew(&a)); 1288f17f7ee2SSatish Balay A->data = (void *)a; 1289f17f7ee2SSatish Balay 1290f17f7ee2SSatish Balay a->eta = 0.9; 1291f17f7ee2SSatish Balay a->leafsize = 32; 1292f17f7ee2SSatish Balay a->basisord = 4; 1293f17f7ee2SSatish Balay a->max_rank = 64; 1294f17f7ee2SSatish Balay a->bs = 32; 1295f17f7ee2SSatish Balay a->rtol = 1.e-4; 1296f17f7ee2SSatish Balay a->s = 1.0; 1297f17f7ee2SSatish Balay a->norm_max_samples = 10; 1298036e4bdcSSatish Balay a->resize = PETSC_TRUE; /* reallocate after compression */ 1299f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1300f17f7ee2SSatish Balay h2opusCreateDistributedHandleComm(&a->handle, PetscObjectComm((PetscObject)A)); 1301f17f7ee2SSatish Balay #else 1302f17f7ee2SSatish Balay h2opusCreateHandle(&a->handle); 1303f17f7ee2SSatish Balay #endif 1304f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1305f17f7ee2SSatish Balay PetscCall(PetscObjectChangeTypeName((PetscObject)A, MATH2OPUS)); 1306f17f7ee2SSatish Balay PetscCall(PetscMemzero(A->ops, sizeof(struct _MatOps))); 1307f17f7ee2SSatish Balay 1308f17f7ee2SSatish Balay A->ops->destroy = MatDestroy_H2OPUS; 1309f17f7ee2SSatish Balay A->ops->view = MatView_H2OPUS; 1310f17f7ee2SSatish Balay A->ops->assemblyend = MatAssemblyEnd_H2OPUS; 1311f17f7ee2SSatish Balay A->ops->mult = MatMult_H2OPUS; 1312f17f7ee2SSatish Balay A->ops->multtranspose = MatMultTranspose_H2OPUS; 1313f17f7ee2SSatish Balay A->ops->multadd = MatMultAdd_H2OPUS; 1314f17f7ee2SSatish Balay A->ops->multtransposeadd = MatMultTransposeAdd_H2OPUS; 1315f17f7ee2SSatish Balay A->ops->scale = MatScale_H2OPUS; 1316f17f7ee2SSatish Balay A->ops->duplicate = MatDuplicate_H2OPUS; 1317f17f7ee2SSatish Balay A->ops->setfromoptions = MatSetFromOptions_H2OPUS; 1318f17f7ee2SSatish Balay A->ops->norm = MatNorm_H2OPUS; 1319f17f7ee2SSatish Balay A->ops->zeroentries = MatZeroEntries_H2OPUS; 1320f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1321f17f7ee2SSatish Balay A->ops->bindtocpu = MatBindToCPU_H2OPUS; 1322f17f7ee2SSatish Balay #endif 1323f17f7ee2SSatish Balay 1324f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_seqdense_C", MatProductSetFromOptions_H2OPUS)); 1325f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_seqdensecuda_C", MatProductSetFromOptions_H2OPUS)); 1326f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_mpidense_C", MatProductSetFromOptions_H2OPUS)); 1327f17f7ee2SSatish Balay PetscCall(PetscObjectComposeFunction((PetscObject)A, "MatProductSetFromOptions_h2opus_mpidensecuda_C", MatProductSetFromOptions_H2OPUS)); 1328f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1329f17f7ee2SSatish Balay PetscCall(PetscFree(A->defaultvectype)); 1330f17f7ee2SSatish Balay PetscCall(PetscStrallocpy(VECCUDA, &A->defaultvectype)); 1331f17f7ee2SSatish Balay #endif 13323ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1333f17f7ee2SSatish Balay } 1334f17f7ee2SSatish Balay 1335cc4c1da9SBarry Smith /*@ 1336f17f7ee2SSatish Balay MatH2OpusOrthogonalize - Orthogonalize the basis tree of a hierarchical matrix. 1337f17f7ee2SSatish Balay 1338f17f7ee2SSatish Balay Input Parameter: 1339f17f7ee2SSatish Balay . A - the matrix 1340f17f7ee2SSatish Balay 1341f17f7ee2SSatish Balay Level: intermediate 1342f17f7ee2SSatish Balay 13431cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()`, `MatCreateH2OpusFromKernel()`, `MatH2OpusCompress()` 1344f17f7ee2SSatish Balay @*/ 1345d71ae5a4SJacob Faibussowitsch PetscErrorCode MatH2OpusOrthogonalize(Mat A) 1346d71ae5a4SJacob Faibussowitsch { 1347f17f7ee2SSatish Balay PetscBool ish2opus; 1348f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1349f17f7ee2SSatish Balay PetscMPIInt size; 1350f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 1351f17f7ee2SSatish Balay 1352f17f7ee2SSatish Balay PetscFunctionBegin; 1353f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 1354f17f7ee2SSatish Balay PetscValidType(A, 1); 1355f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 13563ba16761SJacob Faibussowitsch if (!ish2opus) PetscFunctionReturn(PETSC_SUCCESS); 13573ba16761SJacob Faibussowitsch if (a->orthogonal) PetscFunctionReturn(PETSC_SUCCESS); 1358f17f7ee2SSatish Balay HLibProfile::clear(); 1359f17f7ee2SSatish Balay PetscCall(PetscLogEventBegin(MAT_H2Opus_Orthog, A, 0, 0, 0)); 1360f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1361f17f7ee2SSatish Balay boundtocpu = A->boundtocpu; 1362f17f7ee2SSatish Balay #endif 1363f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1364f17f7ee2SSatish Balay if (size > 1) { 1365f17f7ee2SSatish Balay if (boundtocpu) { 1366f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1367f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1368f17f7ee2SSatish Balay distributed_horthog(*a->dist_hmatrix, a->handle); 1369f17f7ee2SSatish Balay #endif 1370f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1371f17f7ee2SSatish Balay A->offloadmask = PETSC_OFFLOAD_CPU; 1372f17f7ee2SSatish Balay } else { 1373f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1374f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeBegin()); 1375f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1376f17f7ee2SSatish Balay distributed_horthog(*a->dist_hmatrix_gpu, a->handle); 1377f17f7ee2SSatish Balay #endif 1378f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeEnd()); 1379f17f7ee2SSatish Balay #endif 1380f17f7ee2SSatish Balay } 1381f17f7ee2SSatish Balay } else { 1382f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1383f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle->handle; 1384f17f7ee2SSatish Balay #else 1385f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle; 1386f17f7ee2SSatish Balay #endif 1387f17f7ee2SSatish Balay if (boundtocpu) { 1388f17f7ee2SSatish Balay PetscCheck(a->hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1389f17f7ee2SSatish Balay horthog(*a->hmatrix, handle); 1390f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1391f17f7ee2SSatish Balay A->offloadmask = PETSC_OFFLOAD_CPU; 1392f17f7ee2SSatish Balay } else { 1393f17f7ee2SSatish Balay PetscCheck(a->hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1394f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeBegin()); 1395f17f7ee2SSatish Balay horthog(*a->hmatrix_gpu, handle); 1396f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeEnd()); 1397f17f7ee2SSatish Balay #endif 1398f17f7ee2SSatish Balay } 1399f17f7ee2SSatish Balay } 1400f17f7ee2SSatish Balay a->orthogonal = PETSC_TRUE; 1401f17f7ee2SSatish Balay { /* log flops */ 1402f17f7ee2SSatish Balay double gops, time, perf, dev; 1403f17f7ee2SSatish Balay HLibProfile::getHorthogPerf(gops, time, perf, dev); 1404f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1405f17f7ee2SSatish Balay if (boundtocpu) { 1406f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 1407f17f7ee2SSatish Balay } else { 1408f17f7ee2SSatish Balay PetscCall(PetscLogGpuFlops(1e9 * gops)); 1409f17f7ee2SSatish Balay } 1410f17f7ee2SSatish Balay #else 1411f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 1412f17f7ee2SSatish Balay #endif 1413f17f7ee2SSatish Balay } 1414f17f7ee2SSatish Balay PetscCall(PetscLogEventEnd(MAT_H2Opus_Orthog, A, 0, 0, 0)); 14153ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1416f17f7ee2SSatish Balay } 1417f17f7ee2SSatish Balay 1418cc4c1da9SBarry Smith /*@ 1419f17f7ee2SSatish Balay MatH2OpusCompress - Compress a hierarchical matrix. 1420f17f7ee2SSatish Balay 1421f17f7ee2SSatish Balay Input Parameters: 1422f17f7ee2SSatish Balay + A - the matrix 1423f17f7ee2SSatish Balay - tol - the absolute truncation threshold 1424f17f7ee2SSatish Balay 1425f17f7ee2SSatish Balay Level: intermediate 1426f17f7ee2SSatish Balay 14271cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()`, `MatCreateH2OpusFromKernel()`, `MatH2OpusOrthogonalize()` 1428f17f7ee2SSatish Balay @*/ 1429d71ae5a4SJacob Faibussowitsch PetscErrorCode MatH2OpusCompress(Mat A, PetscReal tol) 1430d71ae5a4SJacob Faibussowitsch { 1431f17f7ee2SSatish Balay PetscBool ish2opus; 1432f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1433f17f7ee2SSatish Balay PetscMPIInt size; 1434f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 1435f17f7ee2SSatish Balay 1436f17f7ee2SSatish Balay PetscFunctionBegin; 1437f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 1438f17f7ee2SSatish Balay PetscValidType(A, 1); 1439f17f7ee2SSatish Balay PetscValidLogicalCollectiveReal(A, tol, 2); 1440f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 14413ba16761SJacob Faibussowitsch if (!ish2opus || tol <= 0.0) PetscFunctionReturn(PETSC_SUCCESS); 1442f17f7ee2SSatish Balay PetscCall(MatH2OpusOrthogonalize(A)); 1443f17f7ee2SSatish Balay HLibProfile::clear(); 1444f17f7ee2SSatish Balay PetscCall(PetscLogEventBegin(MAT_H2Opus_Compress, A, 0, 0, 0)); 1445f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1446f17f7ee2SSatish Balay boundtocpu = A->boundtocpu; 1447f17f7ee2SSatish Balay #endif 1448f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1449f17f7ee2SSatish Balay if (size > 1) { 1450f17f7ee2SSatish Balay if (boundtocpu) { 1451f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1452f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1453f17f7ee2SSatish Balay distributed_hcompress(*a->dist_hmatrix, tol, a->handle); 1454036e4bdcSSatish Balay if (a->resize) { 1455036e4bdcSSatish Balay DistributedHMatrix *dist_hmatrix = new DistributedHMatrix(*a->dist_hmatrix); 1456036e4bdcSSatish Balay delete a->dist_hmatrix; 1457036e4bdcSSatish Balay a->dist_hmatrix = dist_hmatrix; 1458036e4bdcSSatish Balay } 1459f17f7ee2SSatish Balay #endif 1460f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1461f17f7ee2SSatish Balay A->offloadmask = PETSC_OFFLOAD_CPU; 1462f17f7ee2SSatish Balay } else { 1463f17f7ee2SSatish Balay PetscCheck(a->dist_hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1464f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeBegin()); 1465f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1466f17f7ee2SSatish Balay distributed_hcompress(*a->dist_hmatrix_gpu, tol, a->handle); 1467036e4bdcSSatish Balay 1468036e4bdcSSatish Balay if (a->resize) { 1469036e4bdcSSatish Balay DistributedHMatrix_GPU *dist_hmatrix_gpu = new DistributedHMatrix_GPU(*a->dist_hmatrix_gpu); 1470036e4bdcSSatish Balay delete a->dist_hmatrix_gpu; 1471036e4bdcSSatish Balay a->dist_hmatrix_gpu = dist_hmatrix_gpu; 1472036e4bdcSSatish Balay } 1473f17f7ee2SSatish Balay #endif 1474f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeEnd()); 1475f17f7ee2SSatish Balay #endif 1476f17f7ee2SSatish Balay } 1477f17f7ee2SSatish Balay } else { 1478f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1479f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle->handle; 1480f17f7ee2SSatish Balay #else 1481f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle; 1482f17f7ee2SSatish Balay #endif 1483f17f7ee2SSatish Balay if (boundtocpu) { 1484f17f7ee2SSatish Balay PetscCheck(a->hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1485f17f7ee2SSatish Balay hcompress(*a->hmatrix, tol, handle); 1486036e4bdcSSatish Balay 1487036e4bdcSSatish Balay if (a->resize) { 1488036e4bdcSSatish Balay HMatrix *hmatrix = new HMatrix(*a->hmatrix); 1489036e4bdcSSatish Balay delete a->hmatrix; 1490036e4bdcSSatish Balay a->hmatrix = hmatrix; 1491036e4bdcSSatish Balay } 1492f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1493f17f7ee2SSatish Balay A->offloadmask = PETSC_OFFLOAD_CPU; 1494f17f7ee2SSatish Balay } else { 1495f17f7ee2SSatish Balay PetscCheck(a->hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1496f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeBegin()); 1497f17f7ee2SSatish Balay hcompress(*a->hmatrix_gpu, tol, handle); 1498f17f7ee2SSatish Balay PetscCall(PetscLogGpuTimeEnd()); 1499036e4bdcSSatish Balay 1500036e4bdcSSatish Balay if (a->resize) { 1501036e4bdcSSatish Balay HMatrix_GPU *hmatrix_gpu = new HMatrix_GPU(*a->hmatrix_gpu); 1502036e4bdcSSatish Balay delete a->hmatrix_gpu; 1503036e4bdcSSatish Balay a->hmatrix_gpu = hmatrix_gpu; 1504036e4bdcSSatish Balay } 1505f17f7ee2SSatish Balay #endif 1506f17f7ee2SSatish Balay } 1507f17f7ee2SSatish Balay } 1508f17f7ee2SSatish Balay { /* log flops */ 1509f17f7ee2SSatish Balay double gops, time, perf, dev; 1510f17f7ee2SSatish Balay HLibProfile::getHcompressPerf(gops, time, perf, dev); 1511f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1512f17f7ee2SSatish Balay if (boundtocpu) { 1513f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 1514f17f7ee2SSatish Balay } else { 1515f17f7ee2SSatish Balay PetscCall(PetscLogGpuFlops(1e9 * gops)); 1516f17f7ee2SSatish Balay } 1517f17f7ee2SSatish Balay #else 1518f17f7ee2SSatish Balay PetscCall(PetscLogFlops(1e9 * gops)); 1519f17f7ee2SSatish Balay #endif 1520f17f7ee2SSatish Balay } 1521f17f7ee2SSatish Balay PetscCall(PetscLogEventEnd(MAT_H2Opus_Compress, A, 0, 0, 0)); 15223ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1523f17f7ee2SSatish Balay } 1524f17f7ee2SSatish Balay 1525cc4c1da9SBarry Smith /*@ 15262ef1f0ffSBarry Smith MatH2OpusSetSamplingMat - Set a matrix to be sampled from matrix-vector products on another matrix to construct a hierarchical matrix. 1527f17f7ee2SSatish Balay 1528f17f7ee2SSatish Balay Input Parameters: 1529f17f7ee2SSatish Balay + A - the hierarchical matrix 1530f17f7ee2SSatish Balay . B - the matrix to be sampled 1531f17f7ee2SSatish Balay . bs - maximum number of samples to be taken concurrently 1532f17f7ee2SSatish Balay - tol - relative tolerance for construction 1533f17f7ee2SSatish Balay 15341d27aa22SBarry Smith Level: intermediate 15351d27aa22SBarry Smith 153611a5261eSBarry Smith Notes: 153711a5261eSBarry Smith You need to call `MatAssemblyBegin()` and `MatAssemblyEnd()` to update the hierarchical matrix. 1538f17f7ee2SSatish Balay 15391cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()`, `MatCreateH2OpusFromKernel()`, `MatH2OpusCompress()`, `MatH2OpusOrthogonalize()` 1540f17f7ee2SSatish Balay @*/ 1541d71ae5a4SJacob Faibussowitsch PetscErrorCode MatH2OpusSetSamplingMat(Mat A, Mat B, PetscInt bs, PetscReal tol) 1542d71ae5a4SJacob Faibussowitsch { 1543f17f7ee2SSatish Balay PetscBool ish2opus; 1544f17f7ee2SSatish Balay 1545f17f7ee2SSatish Balay PetscFunctionBegin; 1546f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 1547f17f7ee2SSatish Balay PetscValidType(A, 1); 1548f17f7ee2SSatish Balay if (B) PetscValidHeaderSpecific(B, MAT_CLASSID, 2); 1549f17f7ee2SSatish Balay PetscValidLogicalCollectiveInt(A, bs, 3); 155007e0ed13SBarry Smith PetscValidLogicalCollectiveReal(A, tol, 4); 1551f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 1552f17f7ee2SSatish Balay if (ish2opus) { 1553f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1554f17f7ee2SSatish Balay 1555f17f7ee2SSatish Balay if (!a->sampler) a->sampler = new PetscMatrixSampler(); 1556f17f7ee2SSatish Balay a->sampler->SetSamplingMat(B); 1557f17f7ee2SSatish Balay if (bs > 0) a->bs = bs; 1558f17f7ee2SSatish Balay if (tol > 0.) a->rtol = tol; 1559f17f7ee2SSatish Balay delete a->kernel; 1560f17f7ee2SSatish Balay } 15613ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1562f17f7ee2SSatish Balay } 1563f17f7ee2SSatish Balay 1564f17f7ee2SSatish Balay /*@C 156511a5261eSBarry Smith MatCreateH2OpusFromKernel - Creates a `MATH2OPUS` from a user-supplied kernel. 1566f17f7ee2SSatish Balay 1567f17f7ee2SSatish Balay Input Parameters: 1568f17f7ee2SSatish Balay + comm - MPI communicator 15692ef1f0ffSBarry Smith . m - number of local rows (or `PETSC_DECIDE` to have calculated if `M` is given) 15702ef1f0ffSBarry Smith . n - number of local columns (or `PETSC_DECIDE` to have calculated if `N` is given) 15712ef1f0ffSBarry Smith . M - number of global rows (or `PETSC_DETERMINE` to have calculated if `m` is given) 15722ef1f0ffSBarry Smith . N - number of global columns (or `PETSC_DETERMINE` to have calculated if `n` is given) 1573f17f7ee2SSatish Balay . spacedim - dimension of the space coordinates 1574f17f7ee2SSatish Balay . coords - coordinates of the points 1575f17f7ee2SSatish Balay . cdist - whether or not coordinates are distributed 15762ef1f0ffSBarry Smith . kernel - computational kernel (or `NULL`) 1577f17f7ee2SSatish Balay . kernelctx - kernel context 1578f17f7ee2SSatish Balay . eta - admissibility condition tolerance 1579f17f7ee2SSatish Balay . leafsize - leaf size in cluster tree 1580f17f7ee2SSatish Balay - basisord - approximation order for Chebychev interpolation of low-rank blocks 1581f17f7ee2SSatish Balay 1582f17f7ee2SSatish Balay Output Parameter: 1583f17f7ee2SSatish Balay . nA - matrix 1584f17f7ee2SSatish Balay 1585f17f7ee2SSatish Balay Options Database Keys: 158611a5261eSBarry Smith + -mat_h2opus_leafsize <`PetscInt`> - Leaf size of cluster tree 158711a5261eSBarry Smith . -mat_h2opus_eta <`PetscReal`> - Admissibility condition tolerance 158811a5261eSBarry Smith . -mat_h2opus_order <`PetscInt`> - Chebychev approximation order 158911a5261eSBarry Smith - -mat_h2opus_normsamples <`PetscInt`> - Maximum number of samples to be used when estimating norms 1590f17f7ee2SSatish Balay 1591f17f7ee2SSatish Balay Level: intermediate 1592f17f7ee2SSatish Balay 15931cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()` 1594f17f7ee2SSatish Balay @*/ 15958434afd1SBarry Smith PetscErrorCode MatCreateH2OpusFromKernel(MPI_Comm comm, PetscInt m, PetscInt n, PetscInt M, PetscInt N, PetscInt spacedim, const PetscReal coords[], PetscBool cdist, MatH2OpusKernelFn *kernel, void *kernelctx, PetscReal eta, PetscInt leafsize, PetscInt basisord, Mat *nA) 1596d71ae5a4SJacob Faibussowitsch { 1597f17f7ee2SSatish Balay Mat A; 1598f17f7ee2SSatish Balay Mat_H2OPUS *h2opus; 1599*fc2fb351SPierre Jolivet PetscBool iscpu = PetscDefined(H2OPUS_USE_GPU) ? PETSC_FALSE : PETSC_TRUE; 1600f17f7ee2SSatish Balay 1601f17f7ee2SSatish Balay PetscFunctionBegin; 1602036e4bdcSSatish Balay PetscCheck(m == n, PETSC_COMM_SELF, PETSC_ERR_SUP, "Different row and column local sizes are not supported"); 1603f17f7ee2SSatish Balay PetscCall(MatCreate(comm, &A)); 1604f17f7ee2SSatish Balay PetscCall(MatSetSizes(A, m, n, M, N)); 1605036e4bdcSSatish Balay PetscCheck(M == N, comm, PETSC_ERR_SUP, "Rectangular matrices are not supported"); 1606f17f7ee2SSatish Balay PetscCall(MatSetType(A, MATH2OPUS)); 1607f17f7ee2SSatish Balay PetscCall(MatBindToCPU(A, iscpu)); 1608f17f7ee2SSatish Balay PetscCall(MatH2OpusSetCoords_H2OPUS(A, spacedim, coords, cdist, kernel, kernelctx)); 1609f17f7ee2SSatish Balay 1610f17f7ee2SSatish Balay h2opus = (Mat_H2OPUS *)A->data; 1611f17f7ee2SSatish Balay if (eta > 0.) h2opus->eta = eta; 1612f17f7ee2SSatish Balay if (leafsize > 0) h2opus->leafsize = leafsize; 1613f17f7ee2SSatish Balay if (basisord > 0) h2opus->basisord = basisord; 1614f17f7ee2SSatish Balay 1615f17f7ee2SSatish Balay *nA = A; 16163ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1617f17f7ee2SSatish Balay } 1618f17f7ee2SSatish Balay 1619cc4c1da9SBarry Smith /*@ 162011a5261eSBarry Smith MatCreateH2OpusFromMat - Creates a `MATH2OPUS` sampling from a user-supplied operator. 1621f17f7ee2SSatish Balay 1622f17f7ee2SSatish Balay Input Parameters: 1623f17f7ee2SSatish Balay + B - the matrix to be sampled 1624f17f7ee2SSatish Balay . spacedim - dimension of the space coordinates 1625f17f7ee2SSatish Balay . coords - coordinates of the points 1626f17f7ee2SSatish Balay . cdist - whether or not coordinates are distributed 1627f17f7ee2SSatish Balay . eta - admissibility condition tolerance 1628f17f7ee2SSatish Balay . leafsize - leaf size in cluster tree 1629f17f7ee2SSatish Balay . maxrank - maximum rank allowed 1630f17f7ee2SSatish Balay . bs - maximum number of samples to be taken concurrently 1631f17f7ee2SSatish Balay - rtol - relative tolerance for construction 1632f17f7ee2SSatish Balay 1633f17f7ee2SSatish Balay Output Parameter: 1634f17f7ee2SSatish Balay . nA - matrix 1635f17f7ee2SSatish Balay 1636f17f7ee2SSatish Balay Options Database Keys: 163711a5261eSBarry Smith + -mat_h2opus_leafsize <`PetscInt`> - Leaf size of cluster tree 163811a5261eSBarry Smith . -mat_h2opus_eta <`PetscReal`> - Admissibility condition tolerance 163911a5261eSBarry Smith . -mat_h2opus_maxrank <`PetscInt`> - Maximum rank when constructed from matvecs 164011a5261eSBarry Smith . -mat_h2opus_samples <`PetscInt`> - Maximum number of samples to be taken concurrently when constructing from matvecs 164111a5261eSBarry Smith . -mat_h2opus_rtol <`PetscReal`> - Relative tolerance for construction from sampling 164211a5261eSBarry Smith . -mat_h2opus_check <`PetscBool`> - Check error when constructing from sampling during MatAssemblyEnd() 164311a5261eSBarry Smith . -mat_h2opus_hara_verbose <`PetscBool`> - Verbose output from hara construction 1644aaa8cc7dSPierre Jolivet - -mat_h2opus_normsamples <`PetscInt`> - Maximum number of samples to be when estimating norms 1645f17f7ee2SSatish Balay 16462ef1f0ffSBarry Smith Level: intermediate 16472ef1f0ffSBarry Smith 164811a5261eSBarry Smith Note: 164911a5261eSBarry Smith Not available in parallel 1650f17f7ee2SSatish Balay 16511cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromKernel()` 1652f17f7ee2SSatish Balay @*/ 1653d71ae5a4SJacob Faibussowitsch PetscErrorCode MatCreateH2OpusFromMat(Mat B, PetscInt spacedim, const PetscReal coords[], PetscBool cdist, PetscReal eta, PetscInt leafsize, PetscInt maxrank, PetscInt bs, PetscReal rtol, Mat *nA) 1654d71ae5a4SJacob Faibussowitsch { 1655f17f7ee2SSatish Balay Mat A; 1656f17f7ee2SSatish Balay Mat_H2OPUS *h2opus; 1657f17f7ee2SSatish Balay MPI_Comm comm; 1658f17f7ee2SSatish Balay PetscBool boundtocpu = PETSC_TRUE; 1659f17f7ee2SSatish Balay 1660f17f7ee2SSatish Balay PetscFunctionBegin; 1661f17f7ee2SSatish Balay PetscValidHeaderSpecific(B, MAT_CLASSID, 1); 1662f17f7ee2SSatish Balay PetscValidLogicalCollectiveInt(B, spacedim, 2); 1663f17f7ee2SSatish Balay PetscValidLogicalCollectiveBool(B, cdist, 4); 1664f17f7ee2SSatish Balay PetscValidLogicalCollectiveReal(B, eta, 5); 1665f17f7ee2SSatish Balay PetscValidLogicalCollectiveInt(B, leafsize, 6); 1666f17f7ee2SSatish Balay PetscValidLogicalCollectiveInt(B, maxrank, 7); 1667f17f7ee2SSatish Balay PetscValidLogicalCollectiveInt(B, bs, 8); 1668f17f7ee2SSatish Balay PetscValidLogicalCollectiveReal(B, rtol, 9); 16694f572ea9SToby Isaac PetscAssertPointer(nA, 10); 1670f17f7ee2SSatish Balay PetscCall(PetscObjectGetComm((PetscObject)B, &comm)); 1671036e4bdcSSatish Balay PetscCheck(B->rmap->n == B->cmap->n, PETSC_COMM_SELF, PETSC_ERR_SUP, "Different row and column local sizes are not supported"); 1672036e4bdcSSatish Balay PetscCheck(B->rmap->N == B->cmap->N, comm, PETSC_ERR_SUP, "Rectangular matrices are not supported"); 1673f17f7ee2SSatish Balay PetscCall(MatCreate(comm, &A)); 1674f17f7ee2SSatish Balay PetscCall(MatSetSizes(A, B->rmap->n, B->cmap->n, B->rmap->N, B->cmap->N)); 1675f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1676f17f7ee2SSatish Balay { 1677f17f7ee2SSatish Balay VecType vtype; 16782592a002SStefano Zampini PetscBool isstd, iscuda, iskok; 1679f17f7ee2SSatish Balay 1680f17f7ee2SSatish Balay PetscCall(MatGetVecType(B, &vtype)); 16812592a002SStefano Zampini PetscCall(PetscStrcmpAny(vtype, &isstd, VECSTANDARD, VECSEQ, VECMPI, "")); 16822592a002SStefano Zampini PetscCall(PetscStrcmpAny(vtype, &iscuda, VECCUDA, VECSEQCUDA, VECMPICUDA, "")); 16832592a002SStefano Zampini PetscCall(PetscStrcmpAny(vtype, &iskok, VECKOKKOS, VECSEQKOKKOS, VECMPIKOKKOS, "")); 16842592a002SStefano Zampini PetscCheck(isstd || iscuda || iskok, comm, PETSC_ERR_SUP, "Not for type %s", vtype); 1685f17f7ee2SSatish Balay if (iscuda && !B->boundtocpu) boundtocpu = PETSC_FALSE; 16862592a002SStefano Zampini if (iskok && PetscDefined(HAVE_MACRO_KOKKOS_ENABLE_CUDA)) boundtocpu = PETSC_FALSE; 1687f17f7ee2SSatish Balay } 1688f17f7ee2SSatish Balay #endif 1689f17f7ee2SSatish Balay PetscCall(MatSetType(A, MATH2OPUS)); 1690f17f7ee2SSatish Balay PetscCall(MatBindToCPU(A, boundtocpu)); 169148a46eb9SPierre Jolivet if (spacedim) PetscCall(MatH2OpusSetCoords_H2OPUS(A, spacedim, coords, cdist, NULL, NULL)); 1692f17f7ee2SSatish Balay PetscCall(MatPropagateSymmetryOptions(B, A)); 1693f17f7ee2SSatish Balay /* PetscCheck(A->symmetric,comm,PETSC_ERR_SUP,"Unsymmetric sampling does not work"); */ 1694f17f7ee2SSatish Balay 1695f17f7ee2SSatish Balay h2opus = (Mat_H2OPUS *)A->data; 1696f17f7ee2SSatish Balay h2opus->sampler = new PetscMatrixSampler(B); 1697f17f7ee2SSatish Balay if (eta > 0.) h2opus->eta = eta; 1698f17f7ee2SSatish Balay if (leafsize > 0) h2opus->leafsize = leafsize; 1699f17f7ee2SSatish Balay if (maxrank > 0) h2opus->max_rank = maxrank; 1700f17f7ee2SSatish Balay if (bs > 0) h2opus->bs = bs; 1701f17f7ee2SSatish Balay if (rtol > 0.) h2opus->rtol = rtol; 1702f17f7ee2SSatish Balay *nA = A; 1703f17f7ee2SSatish Balay A->preallocated = PETSC_TRUE; 17043ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1705f17f7ee2SSatish Balay } 1706f17f7ee2SSatish Balay 1707cc4c1da9SBarry Smith /*@ 1708f17f7ee2SSatish Balay MatH2OpusGetIndexMap - Access reordering index set. 1709f17f7ee2SSatish Balay 17102fe279fdSBarry Smith Input Parameter: 1711f17f7ee2SSatish Balay . A - the matrix 1712f17f7ee2SSatish Balay 1713f17f7ee2SSatish Balay Output Parameter: 1714f17f7ee2SSatish Balay . indexmap - the index set for the reordering 1715f17f7ee2SSatish Balay 1716f17f7ee2SSatish Balay Level: intermediate 1717f17f7ee2SSatish Balay 17181cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()`, `MatCreateH2OpusFromKernel()` 1719f17f7ee2SSatish Balay @*/ 1720d71ae5a4SJacob Faibussowitsch PetscErrorCode MatH2OpusGetIndexMap(Mat A, IS *indexmap) 1721d71ae5a4SJacob Faibussowitsch { 1722f17f7ee2SSatish Balay PetscBool ish2opus; 1723f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1724f17f7ee2SSatish Balay 1725f17f7ee2SSatish Balay PetscFunctionBegin; 1726f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 1727f17f7ee2SSatish Balay PetscValidType(A, 1); 17284f572ea9SToby Isaac PetscAssertPointer(indexmap, 2); 1729f17f7ee2SSatish Balay PetscCheck(A->assembled, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix"); 1730f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 1731f17f7ee2SSatish Balay PetscCheck(ish2opus, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for type %s", ((PetscObject)A)->type_name); 1732f17f7ee2SSatish Balay *indexmap = a->h2opus_indexmap; 17333ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1734f17f7ee2SSatish Balay } 1735f17f7ee2SSatish Balay 1736cc4c1da9SBarry Smith /*@ 1737f17f7ee2SSatish Balay MatH2OpusMapVec - Maps a vector between PETSc and H2Opus ordering 1738f17f7ee2SSatish Balay 1739f17f7ee2SSatish Balay Input Parameters: 1740f17f7ee2SSatish Balay + A - the matrix 1741f17f7ee2SSatish Balay . nativetopetsc - if true, maps from H2Opus ordering to PETSc ordering. If false, applies the reverse map 1742f17f7ee2SSatish Balay - in - the vector to be mapped 1743f17f7ee2SSatish Balay 1744f17f7ee2SSatish Balay Output Parameter: 1745f17f7ee2SSatish Balay . out - the newly created mapped vector 1746f17f7ee2SSatish Balay 1747f17f7ee2SSatish Balay Level: intermediate 1748f17f7ee2SSatish Balay 17491cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()`, `MatCreateH2OpusFromKernel()` 1750f17f7ee2SSatish Balay @*/ 1751d71ae5a4SJacob Faibussowitsch PetscErrorCode MatH2OpusMapVec(Mat A, PetscBool nativetopetsc, Vec in, Vec *out) 1752d71ae5a4SJacob Faibussowitsch { 1753f17f7ee2SSatish Balay PetscBool ish2opus; 1754f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1755f17f7ee2SSatish Balay PetscScalar *xin, *xout; 1756f17f7ee2SSatish Balay PetscBool nm; 1757f17f7ee2SSatish Balay 1758f17f7ee2SSatish Balay PetscFunctionBegin; 1759f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 1760f17f7ee2SSatish Balay PetscValidType(A, 1); 1761f17f7ee2SSatish Balay PetscValidLogicalCollectiveBool(A, nativetopetsc, 2); 1762f17f7ee2SSatish Balay PetscValidHeaderSpecific(in, VEC_CLASSID, 3); 17634f572ea9SToby Isaac PetscAssertPointer(out, 4); 1764f17f7ee2SSatish Balay PetscCheck(A->assembled, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix"); 1765f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &ish2opus)); 1766f17f7ee2SSatish Balay PetscCheck(ish2opus, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not for type %s", ((PetscObject)A)->type_name); 1767f17f7ee2SSatish Balay nm = a->nativemult; 1768f17f7ee2SSatish Balay PetscCall(MatH2OpusSetNativeMult(A, (PetscBool)!nativetopetsc)); 1769f17f7ee2SSatish Balay PetscCall(MatCreateVecs(A, out, NULL)); 1770f17f7ee2SSatish Balay PetscCall(MatH2OpusSetNativeMult(A, nm)); 1771f17f7ee2SSatish Balay if (!a->sf) { /* same ordering */ 1772f17f7ee2SSatish Balay PetscCall(VecCopy(in, *out)); 17733ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1774f17f7ee2SSatish Balay } 1775f17f7ee2SSatish Balay PetscCall(VecGetArrayRead(in, (const PetscScalar **)&xin)); 1776f17f7ee2SSatish Balay PetscCall(VecGetArrayWrite(*out, &xout)); 1777f17f7ee2SSatish Balay if (nativetopetsc) { 1778f17f7ee2SSatish Balay PetscCall(PetscSFReduceBegin(a->sf, MPIU_SCALAR, xin, xout, MPI_REPLACE)); 1779f17f7ee2SSatish Balay PetscCall(PetscSFReduceEnd(a->sf, MPIU_SCALAR, xin, xout, MPI_REPLACE)); 1780f17f7ee2SSatish Balay } else { 1781f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(a->sf, MPIU_SCALAR, xin, xout, MPI_REPLACE)); 1782f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(a->sf, MPIU_SCALAR, xin, xout, MPI_REPLACE)); 1783f17f7ee2SSatish Balay } 1784f17f7ee2SSatish Balay PetscCall(VecRestoreArrayRead(in, (const PetscScalar **)&xin)); 1785f17f7ee2SSatish Balay PetscCall(VecRestoreArrayWrite(*out, &xout)); 17863ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1787f17f7ee2SSatish Balay } 1788f17f7ee2SSatish Balay 1789cc4c1da9SBarry Smith /*@ 17901d27aa22SBarry Smith MatH2OpusLowRankUpdate - Perform a low-rank update of the form $ A = A + s * U * V^T $ 1791f17f7ee2SSatish Balay 1792f17f7ee2SSatish Balay Input Parameters: 179311a5261eSBarry Smith + A - the hierarchical `MATH2OPUS` matrix 1794f17f7ee2SSatish Balay . s - the scaling factor 1795f17f7ee2SSatish Balay . U - the dense low-rank update matrix 17962ef1f0ffSBarry Smith - V - (optional) the dense low-rank update matrix (if `NULL`, then `V` = `U` is assumed) 1797f17f7ee2SSatish Balay 179811a5261eSBarry Smith Note: 17991d27aa22SBarry Smith The `U` and `V` matrices must be in `MATDENSE` dense format 1800f17f7ee2SSatish Balay 1801f17f7ee2SSatish Balay Level: intermediate 1802f17f7ee2SSatish Balay 18031cc06b55SBarry Smith .seealso: [](ch_matrices), `Mat`, `MatCreate()`, `MATH2OPUS`, `MatCreateH2OpusFromMat()`, `MatCreateH2OpusFromKernel()`, `MatH2OpusCompress()`, `MatH2OpusOrthogonalize()`, `MATDENSE` 1804f17f7ee2SSatish Balay @*/ 1805d71ae5a4SJacob Faibussowitsch PetscErrorCode MatH2OpusLowRankUpdate(Mat A, Mat U, Mat V, PetscScalar s) 1806d71ae5a4SJacob Faibussowitsch { 1807f17f7ee2SSatish Balay PetscBool flg; 1808f17f7ee2SSatish Balay 1809f17f7ee2SSatish Balay PetscFunctionBegin; 1810f17f7ee2SSatish Balay PetscValidHeaderSpecific(A, MAT_CLASSID, 1); 1811f17f7ee2SSatish Balay PetscValidType(A, 1); 1812f17f7ee2SSatish Balay PetscCheck(A->assembled, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Not for unassembled matrix"); 1813f17f7ee2SSatish Balay PetscValidHeaderSpecific(U, MAT_CLASSID, 2); 1814f17f7ee2SSatish Balay PetscCheckSameComm(A, 1, U, 2); 1815f17f7ee2SSatish Balay if (V) { 1816f17f7ee2SSatish Balay PetscValidHeaderSpecific(V, MAT_CLASSID, 3); 1817f17f7ee2SSatish Balay PetscCheckSameComm(A, 1, V, 3); 1818f17f7ee2SSatish Balay } 1819f17f7ee2SSatish Balay PetscValidLogicalCollectiveScalar(A, s, 4); 1820f17f7ee2SSatish Balay 1821f17f7ee2SSatish Balay if (!V) V = U; 1822036e4bdcSSatish Balay PetscCheck(U->cmap->N == V->cmap->N, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "Non matching rank update %" PetscInt_FMT " != %" PetscInt_FMT, U->cmap->N, V->cmap->N); 18233ba16761SJacob Faibussowitsch if (!U->cmap->N) PetscFunctionReturn(PETSC_SUCCESS); 1824f17f7ee2SSatish Balay PetscCall(PetscLayoutCompare(U->rmap, A->rmap, &flg)); 1825f17f7ee2SSatish Balay PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "A and U must have the same row layout"); 1826f17f7ee2SSatish Balay PetscCall(PetscLayoutCompare(V->rmap, A->cmap, &flg)); 1827f17f7ee2SSatish Balay PetscCheck(flg, PetscObjectComm((PetscObject)A), PETSC_ERR_ARG_WRONGSTATE, "A column layout must match V row column layout"); 1828f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompare((PetscObject)A, MATH2OPUS, &flg)); 1829f17f7ee2SSatish Balay if (flg) { 1830f17f7ee2SSatish Balay Mat_H2OPUS *a = (Mat_H2OPUS *)A->data; 1831f17f7ee2SSatish Balay const PetscScalar *u, *v, *uu, *vv; 1832f17f7ee2SSatish Balay PetscInt ldu, ldv; 1833f17f7ee2SSatish Balay PetscMPIInt size; 1834f17f7ee2SSatish Balay #if defined(H2OPUS_USE_MPI) 1835f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle->handle; 1836f17f7ee2SSatish Balay #else 1837f17f7ee2SSatish Balay h2opusHandle_t handle = a->handle; 1838f17f7ee2SSatish Balay #endif 1839f17f7ee2SSatish Balay PetscBool usesf = (PetscBool)(a->sf && !a->nativemult); 1840f17f7ee2SSatish Balay PetscSF usf, vsf; 1841f17f7ee2SSatish Balay 1842f17f7ee2SSatish Balay PetscCallMPI(MPI_Comm_size(PetscObjectComm((PetscObject)A), &size)); 1843036e4bdcSSatish Balay PetscCheck(size <= 1, PetscObjectComm((PetscObject)A), PETSC_ERR_SUP, "Not yet implemented in parallel"); 1844f17f7ee2SSatish Balay PetscCall(PetscLogEventBegin(MAT_H2Opus_LR, A, 0, 0, 0)); 1845f17f7ee2SSatish Balay PetscCall(PetscObjectBaseTypeCompareAny((PetscObject)U, &flg, MATSEQDENSE, MATMPIDENSE, "")); 1846f17f7ee2SSatish Balay PetscCheck(flg, PetscObjectComm((PetscObject)U), PETSC_ERR_SUP, "Not for U of type %s", ((PetscObject)U)->type_name); 1847f17f7ee2SSatish Balay PetscCall(PetscObjectBaseTypeCompareAny((PetscObject)V, &flg, MATSEQDENSE, MATMPIDENSE, "")); 1848f17f7ee2SSatish Balay PetscCheck(flg, PetscObjectComm((PetscObject)V), PETSC_ERR_SUP, "Not for V of type %s", ((PetscObject)V)->type_name); 1849f17f7ee2SSatish Balay PetscCall(MatDenseGetLDA(U, &ldu)); 1850f17f7ee2SSatish Balay PetscCall(MatDenseGetLDA(V, &ldv)); 1851f17f7ee2SSatish Balay PetscCall(MatBoundToCPU(A, &flg)); 1852f17f7ee2SSatish Balay if (usesf) { 1853f17f7ee2SSatish Balay PetscInt n; 1854f17f7ee2SSatish Balay 18550dd791a8SStefano Zampini PetscCall(MatDenseGetH2OpusStridedSF(U, a->sf, &usf)); 18560dd791a8SStefano Zampini PetscCall(MatDenseGetH2OpusStridedSF(V, a->sf, &vsf)); 1857f17f7ee2SSatish Balay PetscCall(MatH2OpusResizeBuffers_Private(A, U->cmap->N, V->cmap->N)); 1858f17f7ee2SSatish Balay PetscCall(PetscSFGetGraph(a->sf, NULL, &n, NULL, NULL)); 1859f17f7ee2SSatish Balay ldu = n; 1860f17f7ee2SSatish Balay ldv = n; 1861f17f7ee2SSatish Balay } 1862f17f7ee2SSatish Balay if (flg) { 1863f17f7ee2SSatish Balay PetscCheck(a->hmatrix, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing CPU matrix"); 1864f17f7ee2SSatish Balay PetscCall(MatDenseGetArrayRead(U, &u)); 1865f17f7ee2SSatish Balay PetscCall(MatDenseGetArrayRead(V, &v)); 1866f17f7ee2SSatish Balay if (usesf) { 1867f17f7ee2SSatish Balay vv = MatH2OpusGetThrustPointer(*a->yy); 1868f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(vsf, MPIU_SCALAR, v, (PetscScalar *)vv, MPI_REPLACE)); 1869f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(vsf, MPIU_SCALAR, v, (PetscScalar *)vv, MPI_REPLACE)); 1870f17f7ee2SSatish Balay if (U != V) { 1871f17f7ee2SSatish Balay uu = MatH2OpusGetThrustPointer(*a->xx); 1872f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(usf, MPIU_SCALAR, u, (PetscScalar *)uu, MPI_REPLACE)); 1873f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(usf, MPIU_SCALAR, u, (PetscScalar *)uu, MPI_REPLACE)); 1874f17f7ee2SSatish Balay } else uu = vv; 18759371c9d4SSatish Balay } else { 18769371c9d4SSatish Balay uu = u; 18779371c9d4SSatish Balay vv = v; 18789371c9d4SSatish Balay } 1879f17f7ee2SSatish Balay hlru_global(*a->hmatrix, uu, ldu, vv, ldv, U->cmap->N, s, handle); 1880f17f7ee2SSatish Balay PetscCall(MatDenseRestoreArrayRead(U, &u)); 1881f17f7ee2SSatish Balay PetscCall(MatDenseRestoreArrayRead(V, &v)); 1882f17f7ee2SSatish Balay } else { 1883f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1884f17f7ee2SSatish Balay PetscBool flgU, flgV; 1885f17f7ee2SSatish Balay 1886f17f7ee2SSatish Balay PetscCheck(a->hmatrix_gpu, PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "Missing GPU matrix"); 1887f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)U, &flgU, MATSEQDENSE, MATMPIDENSE, "")); 1888f17f7ee2SSatish Balay if (flgU) PetscCall(MatConvert(U, MATDENSECUDA, MAT_INPLACE_MATRIX, &U)); 1889f17f7ee2SSatish Balay PetscCall(PetscObjectTypeCompareAny((PetscObject)V, &flgV, MATSEQDENSE, MATMPIDENSE, "")); 1890f17f7ee2SSatish Balay if (flgV) PetscCall(MatConvert(V, MATDENSECUDA, MAT_INPLACE_MATRIX, &V)); 1891f17f7ee2SSatish Balay PetscCall(MatDenseCUDAGetArrayRead(U, &u)); 1892f17f7ee2SSatish Balay PetscCall(MatDenseCUDAGetArrayRead(V, &v)); 1893f17f7ee2SSatish Balay if (usesf) { 1894f17f7ee2SSatish Balay vv = MatH2OpusGetThrustPointer(*a->yy_gpu); 1895f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(vsf, MPIU_SCALAR, v, (PetscScalar *)vv, MPI_REPLACE)); 1896f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(vsf, MPIU_SCALAR, v, (PetscScalar *)vv, MPI_REPLACE)); 1897f17f7ee2SSatish Balay if (U != V) { 1898f17f7ee2SSatish Balay uu = MatH2OpusGetThrustPointer(*a->xx_gpu); 1899f17f7ee2SSatish Balay PetscCall(PetscSFBcastBegin(usf, MPIU_SCALAR, u, (PetscScalar *)uu, MPI_REPLACE)); 1900f17f7ee2SSatish Balay PetscCall(PetscSFBcastEnd(usf, MPIU_SCALAR, u, (PetscScalar *)uu, MPI_REPLACE)); 1901f17f7ee2SSatish Balay } else uu = vv; 19029371c9d4SSatish Balay } else { 19039371c9d4SSatish Balay uu = u; 19049371c9d4SSatish Balay vv = v; 19059371c9d4SSatish Balay } 1906f17f7ee2SSatish Balay #else 1907f17f7ee2SSatish Balay SETERRQ(PetscObjectComm((PetscObject)A), PETSC_ERR_PLIB, "This should not happen"); 1908f17f7ee2SSatish Balay #endif 1909f17f7ee2SSatish Balay hlru_global(*a->hmatrix_gpu, uu, ldu, vv, ldv, U->cmap->N, s, handle); 1910f17f7ee2SSatish Balay #if defined(PETSC_H2OPUS_USE_GPU) 1911f17f7ee2SSatish Balay PetscCall(MatDenseCUDARestoreArrayRead(U, &u)); 1912f17f7ee2SSatish Balay PetscCall(MatDenseCUDARestoreArrayRead(V, &v)); 1913f17f7ee2SSatish Balay if (flgU) PetscCall(MatConvert(U, MATDENSE, MAT_INPLACE_MATRIX, &U)); 1914f17f7ee2SSatish Balay if (flgV) PetscCall(MatConvert(V, MATDENSE, MAT_INPLACE_MATRIX, &V)); 1915f17f7ee2SSatish Balay #endif 1916f17f7ee2SSatish Balay } 1917f17f7ee2SSatish Balay PetscCall(PetscLogEventEnd(MAT_H2Opus_LR, A, 0, 0, 0)); 1918f17f7ee2SSatish Balay a->orthogonal = PETSC_FALSE; 1919f17f7ee2SSatish Balay } 19203ba16761SJacob Faibussowitsch PetscFunctionReturn(PETSC_SUCCESS); 1921f17f7ee2SSatish Balay } 1922f17f7ee2SSatish Balay #endif 1923