163c07aadSStefano Zampini 263c07aadSStefano Zampini /* 363c07aadSStefano Zampini Creates hypre ijmatrix from PETSc matrix 463c07aadSStefano Zampini */ 5225daaf8SStefano Zampini 6225daaf8SStefano Zampini /*MC 7225daaf8SStefano Zampini MATHYPRE - MATHYPRE = "hypre" - A matrix type to be used for sequential and parallel sparse matrices 8225daaf8SStefano Zampini based on the hypre IJ interface. 9225daaf8SStefano Zampini 10225daaf8SStefano Zampini Level: intermediate 11225daaf8SStefano Zampini 12225daaf8SStefano Zampini .seealso: MatCreate() 13225daaf8SStefano Zampini M*/ 14225daaf8SStefano Zampini 15dd9c0a25Sstefano_zampini #include <petscmathypre.h> 1663c07aadSStefano Zampini #include <petsc/private/matimpl.h> 1763c07aadSStefano Zampini #include <../src/mat/impls/hypre/mhypre.h> 1863c07aadSStefano Zampini #include <../src/mat/impls/aij/mpi/mpiaij.h> 1958968eb6SStefano Zampini #include <../src/vec/vec/impls/hypre/vhyp.h> 2058968eb6SStefano Zampini #include <HYPRE.h> 21c1a070e6SStefano Zampini #include <HYPRE_utilities.h> 22cd8bc7baSStefano Zampini #include <_hypre_parcsr_ls.h> 2363c07aadSStefano Zampini 2463c07aadSStefano Zampini static PetscErrorCode MatHYPRE_CreateFromMat(Mat,Mat_HYPRE*); 2563c07aadSStefano Zampini static PetscErrorCode MatHYPRE_IJMatrixPreallocate(Mat,Mat,HYPRE_IJMatrix); 2663c07aadSStefano Zampini static PetscErrorCode MatHYPRE_IJMatrixFastCopy_MPIAIJ(Mat,HYPRE_IJMatrix); 2763c07aadSStefano Zampini static PetscErrorCode MatHYPRE_IJMatrixFastCopy_SeqAIJ(Mat,HYPRE_IJMatrix); 2863c07aadSStefano Zampini static PetscErrorCode MatHYPRE_MultKernel_Private(Mat,Vec,Vec,PetscBool); 29225daaf8SStefano Zampini static PetscErrorCode hypre_array_destroy(void*); 3063c07aadSStefano Zampini 3163c07aadSStefano Zampini #undef __FUNCT__ 3263c07aadSStefano Zampini #define __FUNCT__ "MatHYPRE_IJMatrixPreallocate" 3363c07aadSStefano Zampini static PetscErrorCode MatHYPRE_IJMatrixPreallocate(Mat A_d, Mat A_o, HYPRE_IJMatrix ij) 3463c07aadSStefano Zampini { 3563c07aadSStefano Zampini PetscErrorCode ierr; 3663c07aadSStefano Zampini PetscInt i,n_d,n_o; 3763c07aadSStefano Zampini const PetscInt *ia_d,*ia_o; 3863c07aadSStefano Zampini PetscBool done_d=PETSC_FALSE,done_o=PETSC_FALSE; 3963c07aadSStefano Zampini PetscInt *nnz_d=NULL,*nnz_o=NULL; 4063c07aadSStefano Zampini 4163c07aadSStefano Zampini PetscFunctionBegin; 4263c07aadSStefano Zampini if (A_d) { /* determine number of nonzero entries in local diagonal part */ 4363c07aadSStefano Zampini ierr = MatGetRowIJ(A_d,0,PETSC_FALSE,PETSC_FALSE,&n_d,&ia_d,NULL,&done_d);CHKERRQ(ierr); 4463c07aadSStefano Zampini if (done_d) { 4563c07aadSStefano Zampini ierr = PetscMalloc1(n_d,&nnz_d);CHKERRQ(ierr); 4663c07aadSStefano Zampini for (i=0; i<n_d; i++) { 4763c07aadSStefano Zampini nnz_d[i] = ia_d[i+1] - ia_d[i]; 4863c07aadSStefano Zampini } 4963c07aadSStefano Zampini } 5063c07aadSStefano Zampini ierr = MatRestoreRowIJ(A_d,0,PETSC_FALSE,PETSC_FALSE,NULL,&ia_d,NULL,&done_d);CHKERRQ(ierr); 5163c07aadSStefano Zampini } 5263c07aadSStefano Zampini if (A_o) { /* determine number of nonzero entries in local off-diagonal part */ 5363c07aadSStefano Zampini ierr = MatGetRowIJ(A_o,0,PETSC_FALSE,PETSC_FALSE,&n_o,&ia_o,NULL,&done_o);CHKERRQ(ierr); 5463c07aadSStefano Zampini if (done_o) { 5563c07aadSStefano Zampini ierr = PetscMalloc1(n_o,&nnz_o);CHKERRQ(ierr); 5663c07aadSStefano Zampini for (i=0; i<n_o; i++) { 5763c07aadSStefano Zampini nnz_o[i] = ia_o[i+1] - ia_o[i]; 5863c07aadSStefano Zampini } 5963c07aadSStefano Zampini } 6063c07aadSStefano Zampini ierr = MatRestoreRowIJ(A_o,0,PETSC_FALSE,PETSC_FALSE,&n_o,&ia_o,NULL,&done_o);CHKERRQ(ierr); 6163c07aadSStefano Zampini } 6263c07aadSStefano Zampini if (done_d) { /* set number of nonzeros in HYPRE IJ matrix */ 6363c07aadSStefano Zampini if (!done_o) { /* only diagonal part */ 6463c07aadSStefano Zampini ierr = PetscMalloc1(n_d,&nnz_o);CHKERRQ(ierr); 6563c07aadSStefano Zampini for (i=0; i<n_d; i++) { 6663c07aadSStefano Zampini nnz_o[i] = 0; 6763c07aadSStefano Zampini } 6863c07aadSStefano Zampini } 6963c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixSetDiagOffdSizes,(ij,(HYPRE_Int *)nnz_d,(HYPRE_Int *)nnz_o)); 7063c07aadSStefano Zampini ierr = PetscFree(nnz_d);CHKERRQ(ierr); 7163c07aadSStefano Zampini ierr = PetscFree(nnz_o);CHKERRQ(ierr); 7263c07aadSStefano Zampini } 7363c07aadSStefano Zampini PetscFunctionReturn(0); 7463c07aadSStefano Zampini } 7563c07aadSStefano Zampini 7663c07aadSStefano Zampini #undef __FUNCT__ 7763c07aadSStefano Zampini #define __FUNCT__ "MatHYPRE_CreateFromMat" 7863c07aadSStefano Zampini static PetscErrorCode MatHYPRE_CreateFromMat(Mat A, Mat_HYPRE *hA) 7963c07aadSStefano Zampini { 8063c07aadSStefano Zampini PetscErrorCode ierr; 8163c07aadSStefano Zampini PetscInt rstart,rend,cstart,cend; 8263c07aadSStefano Zampini 8363c07aadSStefano Zampini PetscFunctionBegin; 84d975228cSstefano_zampini ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr); 85d975228cSstefano_zampini ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr); 8663c07aadSStefano Zampini rstart = A->rmap->rstart; 8763c07aadSStefano Zampini rend = A->rmap->rend; 8863c07aadSStefano Zampini cstart = A->cmap->rstart; 8963c07aadSStefano Zampini cend = A->cmap->rend; 9063c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixCreate,(hA->comm,rstart,rend-1,cstart,cend-1,&hA->ij)); 9163c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixSetObjectType,(hA->ij,HYPRE_PARCSR)); 9263c07aadSStefano Zampini { 9363c07aadSStefano Zampini PetscBool same; 9463c07aadSStefano Zampini Mat A_d,A_o; 9563c07aadSStefano Zampini const PetscInt *colmap; 9663c07aadSStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&same);CHKERRQ(ierr); 9763c07aadSStefano Zampini if (same) { 9863c07aadSStefano Zampini ierr = MatMPIAIJGetSeqAIJ(A,&A_d,&A_o,&colmap);CHKERRQ(ierr); 9963c07aadSStefano Zampini ierr = MatHYPRE_IJMatrixPreallocate(A_d,A_o,hA->ij);CHKERRQ(ierr); 10063c07aadSStefano Zampini PetscFunctionReturn(0); 10163c07aadSStefano Zampini } 10263c07aadSStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIBAIJ,&same);CHKERRQ(ierr); 10363c07aadSStefano Zampini if (same) { 10463c07aadSStefano Zampini ierr = MatMPIBAIJGetSeqBAIJ(A,&A_d,&A_o,&colmap);CHKERRQ(ierr); 10563c07aadSStefano Zampini ierr = MatHYPRE_IJMatrixPreallocate(A_d,A_o,hA->ij);CHKERRQ(ierr); 10663c07aadSStefano Zampini PetscFunctionReturn(0); 10763c07aadSStefano Zampini } 10863c07aadSStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&same);CHKERRQ(ierr); 10963c07aadSStefano Zampini if (same) { 11063c07aadSStefano Zampini ierr = MatHYPRE_IJMatrixPreallocate(A,NULL,hA->ij);CHKERRQ(ierr); 11163c07aadSStefano Zampini PetscFunctionReturn(0); 11263c07aadSStefano Zampini } 11363c07aadSStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&same);CHKERRQ(ierr); 11463c07aadSStefano Zampini if (same) { 11563c07aadSStefano Zampini ierr = MatHYPRE_IJMatrixPreallocate(A,NULL,hA->ij);CHKERRQ(ierr); 11663c07aadSStefano Zampini PetscFunctionReturn(0); 11763c07aadSStefano Zampini } 11863c07aadSStefano Zampini } 11963c07aadSStefano Zampini PetscFunctionReturn(0); 12063c07aadSStefano Zampini } 12163c07aadSStefano Zampini 12263c07aadSStefano Zampini #undef __FUNCT__ 12363c07aadSStefano Zampini #define __FUNCT__ "MatHYPRE_IJMatrixCopy" 12463c07aadSStefano Zampini static PetscErrorCode MatHYPRE_IJMatrixCopy(Mat A, HYPRE_IJMatrix ij) 12563c07aadSStefano Zampini { 12663c07aadSStefano Zampini PetscErrorCode ierr; 12763c07aadSStefano Zampini PetscInt i,rstart,rend,ncols,nr,nc; 12863c07aadSStefano Zampini const PetscScalar *values; 12963c07aadSStefano Zampini const PetscInt *cols; 13063c07aadSStefano Zampini PetscBool flg; 13163c07aadSStefano Zampini 13263c07aadSStefano Zampini PetscFunctionBegin; 13363c07aadSStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&flg);CHKERRQ(ierr); 13463c07aadSStefano Zampini ierr = MatGetSize(A,&nr,&nc);CHKERRQ(ierr); 13563c07aadSStefano Zampini if (flg && nr == nc) { 13663c07aadSStefano Zampini ierr = MatHYPRE_IJMatrixFastCopy_MPIAIJ(A,ij);CHKERRQ(ierr); 13763c07aadSStefano Zampini PetscFunctionReturn(0); 13863c07aadSStefano Zampini } 13963c07aadSStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&flg);CHKERRQ(ierr); 14063c07aadSStefano Zampini if (flg) { 14163c07aadSStefano Zampini ierr = MatHYPRE_IJMatrixFastCopy_SeqAIJ(A,ij);CHKERRQ(ierr); 14263c07aadSStefano Zampini PetscFunctionReturn(0); 14363c07aadSStefano Zampini } 14463c07aadSStefano Zampini 14563c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixInitialize,(ij)); 14663c07aadSStefano Zampini ierr = MatGetOwnershipRange(A,&rstart,&rend);CHKERRQ(ierr); 14763c07aadSStefano Zampini for (i=rstart; i<rend; i++) { 14863c07aadSStefano Zampini ierr = MatGetRow(A,i,&ncols,&cols,&values);CHKERRQ(ierr); 14963c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixSetValues,(ij,1,(HYPRE_Int *)&ncols,(HYPRE_Int *)&i,(HYPRE_Int *)cols,values)); 15063c07aadSStefano Zampini ierr = MatRestoreRow(A,i,&ncols,&cols,&values);CHKERRQ(ierr); 15163c07aadSStefano Zampini } 15263c07aadSStefano Zampini PetscFunctionReturn(0); 15363c07aadSStefano Zampini } 15463c07aadSStefano Zampini 15563c07aadSStefano Zampini #undef __FUNCT__ 15663c07aadSStefano Zampini #define __FUNCT__ "MatHYPRE_IJMatrixFastCopy_SeqAIJ" 15763c07aadSStefano Zampini static PetscErrorCode MatHYPRE_IJMatrixFastCopy_SeqAIJ(Mat A, HYPRE_IJMatrix ij) 15863c07aadSStefano Zampini { 15963c07aadSStefano Zampini PetscErrorCode ierr; 16063c07aadSStefano Zampini Mat_SeqAIJ *pdiag = (Mat_SeqAIJ*)A->data; 16158968eb6SStefano Zampini HYPRE_Int type; 16263c07aadSStefano Zampini hypre_ParCSRMatrix *par_matrix; 16363c07aadSStefano Zampini hypre_AuxParCSRMatrix *aux_matrix; 16463c07aadSStefano Zampini hypre_CSRMatrix *hdiag; 16563c07aadSStefano Zampini 16663c07aadSStefano Zampini PetscFunctionBegin; 16763c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixInitialize,(ij)); 168ea9daf28SStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(ij,&type)); 169ea9daf28SStefano Zampini if (type != HYPRE_PARCSR) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported"); 170ea9daf28SStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixGetObject,(ij,(void**)&par_matrix)); 17163c07aadSStefano Zampini hdiag = hypre_ParCSRMatrixDiag(par_matrix); 17263c07aadSStefano Zampini /* 17363c07aadSStefano Zampini this is the Hack part where we monkey directly with the hypre datastructures 17463c07aadSStefano Zampini */ 17563c07aadSStefano Zampini ierr = PetscMemcpy(hdiag->i,pdiag->i,(A->rmap->n + 1)*sizeof(PetscInt)); 17663c07aadSStefano Zampini ierr = PetscMemcpy(hdiag->j,pdiag->j,pdiag->nz*sizeof(PetscInt)); 17763c07aadSStefano Zampini ierr = PetscMemcpy(hdiag->data,pdiag->a,pdiag->nz*sizeof(PetscScalar)); 178ea9daf28SStefano Zampini 179ea9daf28SStefano Zampini aux_matrix = (hypre_AuxParCSRMatrix*)hypre_IJMatrixTranslator(ij); 18063c07aadSStefano Zampini hypre_AuxParCSRMatrixNeedAux(aux_matrix) = 0; 18163c07aadSStefano Zampini PetscFunctionReturn(0); 18263c07aadSStefano Zampini } 18363c07aadSStefano Zampini 18463c07aadSStefano Zampini #undef __FUNCT__ 18563c07aadSStefano Zampini #define __FUNCT__ "MatHYPRE_IJMatrixFastCopy_MPIAIJ" 18663c07aadSStefano Zampini static PetscErrorCode MatHYPRE_IJMatrixFastCopy_MPIAIJ(Mat A, HYPRE_IJMatrix ij) 18763c07aadSStefano Zampini { 18863c07aadSStefano Zampini PetscErrorCode ierr; 18963c07aadSStefano Zampini Mat_MPIAIJ *pA = (Mat_MPIAIJ*)A->data; 19063c07aadSStefano Zampini Mat_SeqAIJ *pdiag,*poffd; 19163c07aadSStefano Zampini PetscInt i,*garray = pA->garray,*jj,cstart,*pjj; 19258968eb6SStefano Zampini HYPRE_Int type; 19363c07aadSStefano Zampini hypre_ParCSRMatrix *par_matrix; 19463c07aadSStefano Zampini hypre_AuxParCSRMatrix *aux_matrix; 19563c07aadSStefano Zampini hypre_CSRMatrix *hdiag,*hoffd; 19663c07aadSStefano Zampini 19763c07aadSStefano Zampini PetscFunctionBegin; 19863c07aadSStefano Zampini pdiag = (Mat_SeqAIJ*) pA->A->data; 19963c07aadSStefano Zampini poffd = (Mat_SeqAIJ*) pA->B->data; 20063c07aadSStefano Zampini /* cstart is only valid for square MPIAIJ layed out in the usual way */ 20163c07aadSStefano Zampini ierr = MatGetOwnershipRange(A,&cstart,NULL);CHKERRQ(ierr); 20263c07aadSStefano Zampini 20363c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixInitialize,(ij)); 204ea9daf28SStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(ij,&type)); 205ea9daf28SStefano Zampini if (type != HYPRE_PARCSR) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported"); 206ea9daf28SStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixGetObject,(ij,(void**)&par_matrix)); 20763c07aadSStefano Zampini hdiag = hypre_ParCSRMatrixDiag(par_matrix); 20863c07aadSStefano Zampini hoffd = hypre_ParCSRMatrixOffd(par_matrix); 20963c07aadSStefano Zampini 21063c07aadSStefano Zampini /* 21163c07aadSStefano Zampini this is the Hack part where we monkey directly with the hypre datastructures 21263c07aadSStefano Zampini */ 21363c07aadSStefano Zampini ierr = PetscMemcpy(hdiag->i,pdiag->i,(pA->A->rmap->n + 1)*sizeof(PetscInt)); 21463c07aadSStefano Zampini /* need to shift the diag column indices (hdiag->j) back to global numbering since hypre is expecting this */ 21563c07aadSStefano Zampini jj = (PetscInt*)hdiag->j; 21663c07aadSStefano Zampini pjj = (PetscInt*)pdiag->j; 21763c07aadSStefano Zampini for (i=0; i<pdiag->nz; i++) jj[i] = cstart + pjj[i]; 21863c07aadSStefano Zampini ierr = PetscMemcpy(hdiag->data,pdiag->a,pdiag->nz*sizeof(PetscScalar)); 21963c07aadSStefano Zampini ierr = PetscMemcpy(hoffd->i,poffd->i,(pA->A->rmap->n + 1)*sizeof(PetscInt)); 22063c07aadSStefano Zampini /* need to move the offd column indices (hoffd->j) back to global numbering since hypre is expecting this 22163c07aadSStefano Zampini If we hacked a hypre a bit more we might be able to avoid this step */ 22263c07aadSStefano Zampini jj = (PetscInt*) hoffd->j; 22363c07aadSStefano Zampini pjj = (PetscInt*) poffd->j; 22463c07aadSStefano Zampini for (i=0; i<poffd->nz; i++) jj[i] = garray[pjj[i]]; 22563c07aadSStefano Zampini ierr = PetscMemcpy(hoffd->data,poffd->a,poffd->nz*sizeof(PetscScalar)); 22663c07aadSStefano Zampini 227ea9daf28SStefano Zampini aux_matrix = (hypre_AuxParCSRMatrix*)hypre_IJMatrixTranslator(ij); 22863c07aadSStefano Zampini hypre_AuxParCSRMatrixNeedAux(aux_matrix) = 0; 22963c07aadSStefano Zampini PetscFunctionReturn(0); 23063c07aadSStefano Zampini } 23163c07aadSStefano Zampini 23263c07aadSStefano Zampini #undef __FUNCT__ 2332df22349SStefano Zampini #define __FUNCT__ "MatConvert_HYPRE_IS" 2342df22349SStefano Zampini static PetscErrorCode MatConvert_HYPRE_IS(Mat A, MatType mtype, MatReuse reuse, Mat* B) 2352df22349SStefano Zampini { 2362df22349SStefano Zampini Mat_HYPRE* mhA = (Mat_HYPRE*)(A->data); 2372df22349SStefano Zampini Mat lA; 2382df22349SStefano Zampini ISLocalToGlobalMapping rl2g,cl2g; 2392df22349SStefano Zampini IS is; 2402df22349SStefano Zampini hypre_ParCSRMatrix *hA; 2412df22349SStefano Zampini hypre_CSRMatrix *hdiag,*hoffd; 2422df22349SStefano Zampini MPI_Comm comm; 2432df22349SStefano Zampini PetscScalar *hdd,*hod,*aa,*data; 2447d968826Sstefano_zampini HYPRE_Int *col_map_offd,*hdi,*hdj,*hoi,*hoj; 2452df22349SStefano Zampini PetscInt *ii,*jj,*iptr,*jptr; 2462df22349SStefano Zampini PetscInt cum,dr,dc,oc,str,stc,nnz,i,jd,jo,M,N; 24758968eb6SStefano Zampini HYPRE_Int type; 2482df22349SStefano Zampini PetscErrorCode ierr; 2492df22349SStefano Zampini 2502df22349SStefano Zampini PetscFunctionBegin; 251a1787963SStefano Zampini comm = PetscObjectComm((PetscObject)A); 2522df22349SStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(mhA->ij,&type)); 2532df22349SStefano Zampini if (type != HYPRE_PARCSR) SETERRQ(comm,PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported"); 2542df22349SStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixGetObject,(mhA->ij,(void**)&hA)); 2552df22349SStefano Zampini M = hypre_ParCSRMatrixGlobalNumRows(hA); 2562df22349SStefano Zampini N = hypre_ParCSRMatrixGlobalNumCols(hA); 2572df22349SStefano Zampini str = hypre_ParCSRMatrixFirstRowIndex(hA); 2582df22349SStefano Zampini stc = hypre_ParCSRMatrixFirstColDiag(hA); 2592df22349SStefano Zampini hdiag = hypre_ParCSRMatrixDiag(hA); 2602df22349SStefano Zampini hoffd = hypre_ParCSRMatrixOffd(hA); 2612df22349SStefano Zampini dr = hypre_CSRMatrixNumRows(hdiag); 2622df22349SStefano Zampini dc = hypre_CSRMatrixNumCols(hdiag); 2632df22349SStefano Zampini nnz = hypre_CSRMatrixNumNonzeros(hdiag); 2642df22349SStefano Zampini hdi = hypre_CSRMatrixI(hdiag); 2652df22349SStefano Zampini hdj = hypre_CSRMatrixJ(hdiag); 2662df22349SStefano Zampini hdd = hypre_CSRMatrixData(hdiag); 2672df22349SStefano Zampini oc = hypre_CSRMatrixNumCols(hoffd); 2682df22349SStefano Zampini nnz += hypre_CSRMatrixNumNonzeros(hoffd); 2692df22349SStefano Zampini hoi = hypre_CSRMatrixI(hoffd); 2702df22349SStefano Zampini hoj = hypre_CSRMatrixJ(hoffd); 2712df22349SStefano Zampini hod = hypre_CSRMatrixData(hoffd); 2722df22349SStefano Zampini if (reuse != MAT_REUSE_MATRIX) { 2732df22349SStefano Zampini PetscInt *aux; 2742df22349SStefano Zampini 2752df22349SStefano Zampini /* generate l2g maps for rows and cols */ 2762df22349SStefano Zampini ierr = ISCreateStride(comm,dr,str,1,&is);CHKERRQ(ierr); 2772df22349SStefano Zampini ierr = ISLocalToGlobalMappingCreateIS(is,&rl2g);CHKERRQ(ierr); 2782df22349SStefano Zampini ierr = ISDestroy(&is);CHKERRQ(ierr); 2792df22349SStefano Zampini col_map_offd = hypre_ParCSRMatrixColMapOffd(hA); 2802df22349SStefano Zampini ierr = PetscMalloc1(dc+oc,&aux);CHKERRQ(ierr); 2812df22349SStefano Zampini for (i=0; i<dc; i++) aux[i] = i+stc; 2822df22349SStefano Zampini for (i=0; i<oc; i++) aux[i+dc] = col_map_offd[i]; 2832df22349SStefano Zampini ierr = ISCreateGeneral(comm,dc+oc,aux,PETSC_OWN_POINTER,&is);CHKERRQ(ierr); 2842df22349SStefano Zampini ierr = ISLocalToGlobalMappingCreateIS(is,&cl2g);CHKERRQ(ierr); 2852df22349SStefano Zampini ierr = ISDestroy(&is);CHKERRQ(ierr); 2862df22349SStefano Zampini /* create MATIS object */ 2872df22349SStefano Zampini ierr = MatCreate(comm,B);CHKERRQ(ierr); 2882df22349SStefano Zampini ierr = MatSetSizes(*B,dr,dc,M,N);CHKERRQ(ierr); 2892df22349SStefano Zampini ierr = MatSetType(*B,MATIS);CHKERRQ(ierr); 2902df22349SStefano Zampini ierr = MatSetLocalToGlobalMapping(*B,rl2g,cl2g);CHKERRQ(ierr); 2912df22349SStefano Zampini ierr = ISLocalToGlobalMappingDestroy(&rl2g);CHKERRQ(ierr); 2922df22349SStefano Zampini ierr = ISLocalToGlobalMappingDestroy(&cl2g);CHKERRQ(ierr); 2932df22349SStefano Zampini 2942df22349SStefano Zampini /* allocate CSR for local matrix */ 2952df22349SStefano Zampini ierr = PetscMalloc1(dr+1,&iptr);CHKERRQ(ierr); 2962df22349SStefano Zampini ierr = PetscMalloc1(nnz,&jptr);CHKERRQ(ierr); 2972df22349SStefano Zampini ierr = PetscMalloc1(nnz,&data);CHKERRQ(ierr); 2982df22349SStefano Zampini } else { 2992df22349SStefano Zampini PetscInt nr; 3002df22349SStefano Zampini PetscBool done; 3012df22349SStefano Zampini ierr = MatISGetLocalMat(*B,&lA);CHKERRQ(ierr); 3022df22349SStefano Zampini ierr = MatGetRowIJ(lA,0,PETSC_FALSE,PETSC_FALSE,&nr,(const PetscInt**)&iptr,(const PetscInt**)&jptr,&done);CHKERRQ(ierr); 3032df22349SStefano Zampini if (nr != dr) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of rows in local mat! %D != %D",nr,dr); 3042df22349SStefano Zampini if (iptr[nr] < nnz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of nonzeros in local mat! reuse %D requested %D",iptr[nr],nnz); 3052df22349SStefano Zampini ierr = MatSeqAIJGetArray(lA,&data);CHKERRQ(ierr); 3062df22349SStefano Zampini } 3072df22349SStefano Zampini /* merge local matrices */ 3082df22349SStefano Zampini ii = iptr; 3092df22349SStefano Zampini jj = jptr; 3102df22349SStefano Zampini aa = data; 3112df22349SStefano Zampini *ii = *(hdi++) + *(hoi++); 3122df22349SStefano Zampini for (jd=0,jo=0,cum=0; *ii<nnz; cum++) { 3132df22349SStefano Zampini PetscScalar *aold = aa; 3142df22349SStefano Zampini PetscInt *jold = jj,nc = jd+jo; 3152df22349SStefano Zampini for (; jd<*hdi; jd++) { *jj++ = *hdj++; *aa++ = *hdd++; } 3162df22349SStefano Zampini for (; jo<*hoi; jo++) { *jj++ = *hoj++ + dc; *aa++ = *hod++; } 3172df22349SStefano Zampini *(++ii) = *(hdi++) + *(hoi++); 3182df22349SStefano Zampini ierr = PetscSortIntWithScalarArray(jd+jo-nc,jold,aold);CHKERRQ(ierr); 3192df22349SStefano Zampini } 3202df22349SStefano Zampini for (; cum<dr; cum++) *(++ii) = nnz; 3212df22349SStefano Zampini if (reuse != MAT_REUSE_MATRIX) { 322a033916dSStefano Zampini Mat_SeqAIJ* a; 323a033916dSStefano Zampini 3242df22349SStefano Zampini ierr = MatCreateSeqAIJWithArrays(PETSC_COMM_SELF,dr,dc+oc,iptr,jptr,data,&lA);CHKERRQ(ierr); 3252df22349SStefano Zampini ierr = MatISSetLocalMat(*B,lA);CHKERRQ(ierr); 326a033916dSStefano Zampini /* hack SeqAIJ */ 327a033916dSStefano Zampini a = (Mat_SeqAIJ*)(lA->data); 328a033916dSStefano Zampini a->free_a = PETSC_TRUE; 329a033916dSStefano Zampini a->free_ij = PETSC_TRUE; 3302df22349SStefano Zampini ierr = MatDestroy(&lA);CHKERRQ(ierr); 3312df22349SStefano Zampini } 3322df22349SStefano Zampini ierr = MatAssemblyBegin(*B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 3332df22349SStefano Zampini ierr = MatAssemblyEnd(*B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 3342df22349SStefano Zampini if (reuse == MAT_INPLACE_MATRIX) { 3352df22349SStefano Zampini ierr = MatHeaderReplace(A,B);CHKERRQ(ierr); 3362df22349SStefano Zampini } 3372df22349SStefano Zampini PetscFunctionReturn(0); 3382df22349SStefano Zampini } 3392df22349SStefano Zampini 3402df22349SStefano Zampini #undef __FUNCT__ 34163c07aadSStefano Zampini #define __FUNCT__ "MatConvert_AIJ_HYPRE" 34263c07aadSStefano Zampini PETSC_INTERN PetscErrorCode MatConvert_AIJ_HYPRE(Mat A, MatType type, MatReuse reuse, Mat *B) 34363c07aadSStefano Zampini { 34463c07aadSStefano Zampini Mat_HYPRE *hB; 34563c07aadSStefano Zampini MPI_Comm comm = PetscObjectComm((PetscObject)A); 34663c07aadSStefano Zampini PetscErrorCode ierr; 34763c07aadSStefano Zampini 34863c07aadSStefano Zampini PetscFunctionBegin; 34963c07aadSStefano Zampini if (reuse == MAT_INPLACE_MATRIX) SETERRQ(comm,PETSC_ERR_SUP,"Unsupported MAT_INPLACE_MATRIX"); 35063c07aadSStefano Zampini if (reuse == MAT_REUSE_MATRIX) { 35163c07aadSStefano Zampini /* always destroy the old matrix and create a new memory; 35263c07aadSStefano Zampini hope this does not churn the memory too much. The problem 35363c07aadSStefano Zampini is I do not know if it is possible to put the matrix back to 35463c07aadSStefano Zampini its initial state so that we can directly copy the values 35563c07aadSStefano Zampini the second time through. */ 35663c07aadSStefano Zampini hB = (Mat_HYPRE*)((*B)->data); 35763c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixDestroy,(hB->ij)); 35863c07aadSStefano Zampini } else { 35963c07aadSStefano Zampini ierr = MatCreate(comm,B);CHKERRQ(ierr); 36063c07aadSStefano Zampini ierr = MatSetType(*B,MATHYPRE);CHKERRQ(ierr); 36163c07aadSStefano Zampini ierr = MatSetSizes(*B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr); 36263c07aadSStefano Zampini hB = (Mat_HYPRE*)((*B)->data); 36363c07aadSStefano Zampini } 36463c07aadSStefano Zampini ierr = MatHYPRE_CreateFromMat(A,hB);CHKERRQ(ierr); 36563c07aadSStefano Zampini ierr = MatHYPRE_IJMatrixCopy(A,hB->ij);CHKERRQ(ierr); 3664ec6421dSstefano_zampini (*B)->preallocated = PETSC_TRUE; 36763c07aadSStefano Zampini ierr = MatAssemblyBegin(*B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 36863c07aadSStefano Zampini ierr = MatAssemblyEnd(*B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 36963c07aadSStefano Zampini PetscFunctionReturn(0); 37063c07aadSStefano Zampini } 37163c07aadSStefano Zampini 37263c07aadSStefano Zampini #undef __FUNCT__ 37363c07aadSStefano Zampini #define __FUNCT__ "MatConvert_HYPRE_AIJ" 374ea9daf28SStefano Zampini static PetscErrorCode MatConvert_HYPRE_AIJ(Mat A, MatType mtype, MatReuse reuse, Mat *B) 37563c07aadSStefano Zampini { 37663c07aadSStefano Zampini Mat_HYPRE *hA = (Mat_HYPRE*)A->data; 37763c07aadSStefano Zampini hypre_ParCSRMatrix *parcsr; 37863c07aadSStefano Zampini hypre_CSRMatrix *hdiag,*hoffd; 37963c07aadSStefano Zampini MPI_Comm comm; 38063c07aadSStefano Zampini PetscScalar *da,*oa,*aptr; 38163c07aadSStefano Zampini PetscInt *dii,*djj,*oii,*ojj,*iptr; 38263c07aadSStefano Zampini PetscInt i,dnnz,onnz,m,n; 38358968eb6SStefano Zampini HYPRE_Int type; 38463c07aadSStefano Zampini PetscMPIInt size; 38563c07aadSStefano Zampini PetscErrorCode ierr; 38663c07aadSStefano Zampini 38763c07aadSStefano Zampini PetscFunctionBegin; 38863c07aadSStefano Zampini comm = PetscObjectComm((PetscObject)A); 38963c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(hA->ij,&type)); 39063c07aadSStefano Zampini if (type != HYPRE_PARCSR) SETERRQ(comm,PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported"); 39163c07aadSStefano Zampini if (reuse == MAT_REUSE_MATRIX) { 39263c07aadSStefano Zampini PetscBool ismpiaij,isseqaij; 39363c07aadSStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)*B,MATMPIAIJ,&ismpiaij);CHKERRQ(ierr); 39463c07aadSStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)*B,MATSEQAIJ,&isseqaij);CHKERRQ(ierr); 39563c07aadSStefano Zampini if (!ismpiaij && !isseqaij) SETERRQ(comm,PETSC_ERR_SUP,"Only MATMPIAIJ or MATSEQAIJ are supported"); 39663c07aadSStefano Zampini } 39763c07aadSStefano Zampini ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr); 39863c07aadSStefano Zampini 39963c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixGetObject,(hA->ij,(void**)&parcsr)); 40063c07aadSStefano Zampini hdiag = hypre_ParCSRMatrixDiag(parcsr); 40163c07aadSStefano Zampini hoffd = hypre_ParCSRMatrixOffd(parcsr); 40263c07aadSStefano Zampini m = hypre_CSRMatrixNumRows(hdiag); 40363c07aadSStefano Zampini n = hypre_CSRMatrixNumCols(hdiag); 40463c07aadSStefano Zampini dnnz = hypre_CSRMatrixNumNonzeros(hdiag); 40563c07aadSStefano Zampini onnz = hypre_CSRMatrixNumNonzeros(hoffd); 406225daaf8SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 40763c07aadSStefano Zampini ierr = PetscMalloc1(m+1,&dii);CHKERRQ(ierr); 40863c07aadSStefano Zampini ierr = PetscMalloc1(dnnz,&djj);CHKERRQ(ierr); 40963c07aadSStefano Zampini ierr = PetscMalloc1(dnnz,&da);CHKERRQ(ierr); 410225daaf8SStefano Zampini } else if (reuse == MAT_REUSE_MATRIX) { 41163c07aadSStefano Zampini PetscInt nr; 41263c07aadSStefano Zampini PetscBool done; 41363c07aadSStefano Zampini if (size > 1) { 41463c07aadSStefano Zampini Mat_MPIAIJ *b = (Mat_MPIAIJ*)((*B)->data); 41563c07aadSStefano Zampini 41663c07aadSStefano Zampini ierr = MatGetRowIJ(b->A,0,PETSC_FALSE,PETSC_FALSE,&nr,(const PetscInt**)&dii,(const PetscInt**)&djj,&done);CHKERRQ(ierr); 41763c07aadSStefano Zampini if (nr != m) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of local rows in diag part! %D != %D",nr,m); 41863c07aadSStefano Zampini if (dii[nr] < dnnz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of nonzeros in diag part! reuse %D hypre %D",dii[nr],dnnz); 41963c07aadSStefano Zampini ierr = MatSeqAIJGetArray(b->A,&da);CHKERRQ(ierr); 42063c07aadSStefano Zampini } else { 42163c07aadSStefano Zampini ierr = MatGetRowIJ(*B,0,PETSC_FALSE,PETSC_FALSE,&nr,(const PetscInt**)&dii,(const PetscInt**)&djj,&done);CHKERRQ(ierr); 42263c07aadSStefano Zampini if (nr != m) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of local rows! %D != %D",nr,m); 42363c07aadSStefano Zampini if (dii[nr] < dnnz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of nonzeros! reuse %D hypre %D",dii[nr],dnnz); 42463c07aadSStefano Zampini ierr = MatSeqAIJGetArray(*B,&da);CHKERRQ(ierr); 42563c07aadSStefano Zampini } 426225daaf8SStefano Zampini } else { /* MAT_INPLACE_MATRIX */ 4277d968826Sstefano_zampini dii = (PetscInt*)hypre_CSRMatrixI(hdiag); 4287d968826Sstefano_zampini djj = (PetscInt*)hypre_CSRMatrixJ(hdiag); 429225daaf8SStefano Zampini da = hypre_CSRMatrixData(hdiag); 43063c07aadSStefano Zampini } 43163c07aadSStefano Zampini ierr = PetscMemcpy(dii,hypre_CSRMatrixI(hdiag),(m+1)*sizeof(PetscInt));CHKERRQ(ierr); 43263c07aadSStefano Zampini ierr = PetscMemcpy(djj,hypre_CSRMatrixJ(hdiag),dnnz*sizeof(PetscInt));CHKERRQ(ierr); 43363c07aadSStefano Zampini ierr = PetscMemcpy(da,hypre_CSRMatrixData(hdiag),dnnz*sizeof(PetscScalar));CHKERRQ(ierr); 43463c07aadSStefano Zampini iptr = djj; 43563c07aadSStefano Zampini aptr = da; 43663c07aadSStefano Zampini for (i=0; i<m; i++) { 43763c07aadSStefano Zampini PetscInt nc = dii[i+1]-dii[i]; 43863c07aadSStefano Zampini ierr = PetscSortIntWithScalarArray(nc,iptr,aptr);CHKERRQ(ierr); 43963c07aadSStefano Zampini iptr += nc; 44063c07aadSStefano Zampini aptr += nc; 44163c07aadSStefano Zampini } 44263c07aadSStefano Zampini if (size > 1) { 4437d968826Sstefano_zampini HYPRE_Int *offdj,*coffd; 44463c07aadSStefano Zampini 445225daaf8SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 44663c07aadSStefano Zampini ierr = PetscMalloc1(m+1,&oii);CHKERRQ(ierr); 44763c07aadSStefano Zampini ierr = PetscMalloc1(onnz,&ojj);CHKERRQ(ierr); 44863c07aadSStefano Zampini ierr = PetscMalloc1(onnz,&oa);CHKERRQ(ierr); 449225daaf8SStefano Zampini } else if (reuse == MAT_REUSE_MATRIX) { 45063c07aadSStefano Zampini Mat_MPIAIJ *b = (Mat_MPIAIJ*)((*B)->data); 45163c07aadSStefano Zampini PetscInt nr,hr = hypre_CSRMatrixNumRows(hoffd); 45263c07aadSStefano Zampini PetscBool done; 45363c07aadSStefano Zampini 45463c07aadSStefano Zampini ierr = MatGetRowIJ(b->B,0,PETSC_FALSE,PETSC_FALSE,&nr,(const PetscInt**)&oii,(const PetscInt**)&ojj,&done);CHKERRQ(ierr); 45563c07aadSStefano Zampini if (nr != hr) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of local rows in offdiag part! %D != %D",nr,hr); 45663c07aadSStefano Zampini if (oii[nr] < onnz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of nonzeros in offdiag part! reuse %D hypre %D",oii[nr],onnz); 45763c07aadSStefano Zampini ierr = MatSeqAIJGetArray(b->B,&oa);CHKERRQ(ierr); 458225daaf8SStefano Zampini } else { /* MAT_INPLACE_MATRIX */ 4597d968826Sstefano_zampini oii = (PetscInt*)hypre_CSRMatrixI(hoffd); 4607d968826Sstefano_zampini ojj = (PetscInt*)hypre_CSRMatrixJ(hoffd); 461225daaf8SStefano Zampini oa = hypre_CSRMatrixData(hoffd); 46263c07aadSStefano Zampini } 46363c07aadSStefano Zampini ierr = PetscMemcpy(oii,hypre_CSRMatrixI(hoffd),(m+1)*sizeof(PetscInt));CHKERRQ(ierr); 46463c07aadSStefano Zampini offdj = hypre_CSRMatrixJ(hoffd); 46563c07aadSStefano Zampini coffd = hypre_ParCSRMatrixColMapOffd(parcsr); 46663c07aadSStefano Zampini for (i=0; i<onnz; i++) ojj[i] = coffd[offdj[i]]; 46763c07aadSStefano Zampini ierr = PetscMemcpy(oa,hypre_CSRMatrixData(hoffd),onnz*sizeof(PetscScalar));CHKERRQ(ierr); 46863c07aadSStefano Zampini iptr = ojj; 46963c07aadSStefano Zampini aptr = oa; 47063c07aadSStefano Zampini for (i=0; i<m; i++) { 47163c07aadSStefano Zampini PetscInt nc = oii[i+1]-oii[i]; 47263c07aadSStefano Zampini ierr = PetscSortIntWithScalarArray(nc,iptr,aptr);CHKERRQ(ierr); 47363c07aadSStefano Zampini iptr += nc; 47463c07aadSStefano Zampini aptr += nc; 47563c07aadSStefano Zampini } 476225daaf8SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 47763c07aadSStefano Zampini Mat_MPIAIJ *b; 47863c07aadSStefano Zampini Mat_SeqAIJ *d,*o; 479225daaf8SStefano Zampini 48041073d71Sstefano_zampini ierr = MatCreateMPIAIJWithSplitArrays(comm,m,n,PETSC_DECIDE,PETSC_DECIDE,dii,djj,da,oii,ojj,oa,B);CHKERRQ(ierr); 48163c07aadSStefano Zampini /* hack MPIAIJ */ 48263c07aadSStefano Zampini b = (Mat_MPIAIJ*)((*B)->data); 48363c07aadSStefano Zampini d = (Mat_SeqAIJ*)b->A->data; 48463c07aadSStefano Zampini o = (Mat_SeqAIJ*)b->B->data; 48563c07aadSStefano Zampini d->free_a = PETSC_TRUE; 48663c07aadSStefano Zampini d->free_ij = PETSC_TRUE; 48763c07aadSStefano Zampini o->free_a = PETSC_TRUE; 48863c07aadSStefano Zampini o->free_ij = PETSC_TRUE; 489225daaf8SStefano Zampini } else if (reuse == MAT_INPLACE_MATRIX) { 490225daaf8SStefano Zampini Mat T; 49141073d71Sstefano_zampini ierr = MatCreateMPIAIJWithSplitArrays(comm,m,n,PETSC_DECIDE,PETSC_DECIDE,dii,djj,da,oii,ojj,oa,&T);CHKERRQ(ierr); 492225daaf8SStefano Zampini hypre_CSRMatrixI(hdiag) = NULL; 493225daaf8SStefano Zampini hypre_CSRMatrixJ(hdiag) = NULL; 494225daaf8SStefano Zampini hypre_CSRMatrixData(hdiag) = NULL; 495225daaf8SStefano Zampini hypre_CSRMatrixI(hoffd) = NULL; 496225daaf8SStefano Zampini hypre_CSRMatrixJ(hoffd) = NULL; 497225daaf8SStefano Zampini hypre_CSRMatrixData(hoffd) = NULL; 498225daaf8SStefano Zampini ierr = MatHeaderReplace(A,&T);CHKERRQ(ierr); 49963c07aadSStefano Zampini } 500225daaf8SStefano Zampini } else { 501225daaf8SStefano Zampini oii = NULL; 502225daaf8SStefano Zampini ojj = NULL; 503225daaf8SStefano Zampini oa = NULL; 504225daaf8SStefano Zampini if (reuse == MAT_INITIAL_MATRIX) { 50563c07aadSStefano Zampini Mat_SeqAIJ* b; 50663c07aadSStefano Zampini ierr = MatCreateSeqAIJWithArrays(comm,m,n,dii,djj,da,B);CHKERRQ(ierr); 50763c07aadSStefano Zampini /* hack SeqAIJ */ 50863c07aadSStefano Zampini b = (Mat_SeqAIJ*)((*B)->data); 50963c07aadSStefano Zampini b->free_a = PETSC_TRUE; 51063c07aadSStefano Zampini b->free_ij = PETSC_TRUE; 511225daaf8SStefano Zampini } else if (reuse == MAT_INPLACE_MATRIX) { 512225daaf8SStefano Zampini Mat T; 513225daaf8SStefano Zampini ierr = MatCreateSeqAIJWithArrays(comm,m,n,dii,djj,da,&T);CHKERRQ(ierr); 514225daaf8SStefano Zampini hypre_CSRMatrixI(hdiag) = NULL; 515225daaf8SStefano Zampini hypre_CSRMatrixJ(hdiag) = NULL; 516225daaf8SStefano Zampini hypre_CSRMatrixData(hdiag) = NULL; 517225daaf8SStefano Zampini ierr = MatHeaderReplace(A,&T);CHKERRQ(ierr); 51863c07aadSStefano Zampini } 519225daaf8SStefano Zampini } 520225daaf8SStefano Zampini 521225daaf8SStefano Zampini /* we have to use hypre_Tfree to free the arrays */ 52263c07aadSStefano Zampini if (reuse == MAT_INPLACE_MATRIX) { 523225daaf8SStefano Zampini void *ptrs[6] = {dii,djj,da,oii,ojj,oa}; 524225daaf8SStefano Zampini const char *names[6] = {"_hypre_csr_dii", 525225daaf8SStefano Zampini "_hypre_csr_djj", 526225daaf8SStefano Zampini "_hypre_csr_da", 527225daaf8SStefano Zampini "_hypre_csr_oii", 528225daaf8SStefano Zampini "_hypre_csr_ojj", 529225daaf8SStefano Zampini "_hypre_csr_oa"}; 530225daaf8SStefano Zampini for (i=0; i<6; i++) { 531225daaf8SStefano Zampini PetscContainer c; 532225daaf8SStefano Zampini 533225daaf8SStefano Zampini ierr = PetscContainerCreate(comm,&c);CHKERRQ(ierr); 534225daaf8SStefano Zampini ierr = PetscContainerSetPointer(c,ptrs[i]);CHKERRQ(ierr); 535225daaf8SStefano Zampini ierr = PetscContainerSetUserDestroy(c,hypre_array_destroy);CHKERRQ(ierr); 536225daaf8SStefano Zampini ierr = PetscObjectCompose((PetscObject)(*B),names[i],(PetscObject)c);CHKERRQ(ierr); 537225daaf8SStefano Zampini ierr = PetscContainerDestroy(&c);CHKERRQ(ierr); 538225daaf8SStefano Zampini } 53963c07aadSStefano Zampini } 54063c07aadSStefano Zampini PetscFunctionReturn(0); 54163c07aadSStefano Zampini } 54263c07aadSStefano Zampini 54363c07aadSStefano Zampini #undef __FUNCT__ 544613e5ff0Sstefano_zampini #define __FUNCT__ "MatAIJGetParCSR_Private" 545613e5ff0Sstefano_zampini static PetscErrorCode MatAIJGetParCSR_Private(Mat A, hypre_ParCSRMatrix **hA) 546c1a070e6SStefano Zampini { 547613e5ff0Sstefano_zampini hypre_ParCSRMatrix *tA; 548c1a070e6SStefano Zampini hypre_CSRMatrix *hdiag,*hoffd; 549c1a070e6SStefano Zampini Mat_SeqAIJ *diag,*offd; 550c1a070e6SStefano Zampini PetscInt *garray,noffd,dnnz,onnz,*row_starts,*col_starts; 551c1a070e6SStefano Zampini MPI_Comm comm = PetscObjectComm((PetscObject)A); 552613e5ff0Sstefano_zampini PetscBool ismpiaij,isseqaij; 553c1a070e6SStefano Zampini PetscErrorCode ierr; 554c1a070e6SStefano Zampini 555c1a070e6SStefano Zampini PetscFunctionBegin; 556c1a070e6SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&ismpiaij);CHKERRQ(ierr); 557c1a070e6SStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isseqaij);CHKERRQ(ierr); 558c1a070e6SStefano Zampini if (!ismpiaij && !isseqaij) SETERRQ1(comm,PETSC_ERR_SUP,"Unsupported type %s",((PetscObject)A)->type); 559c1a070e6SStefano Zampini if (ismpiaij) { 560c1a070e6SStefano Zampini Mat_MPIAIJ *a = (Mat_MPIAIJ*)(A->data); 561c1a070e6SStefano Zampini 562c1a070e6SStefano Zampini diag = (Mat_SeqAIJ*)a->A->data; 563c1a070e6SStefano Zampini offd = (Mat_SeqAIJ*)a->B->data; 564c1a070e6SStefano Zampini garray = a->garray; 565c1a070e6SStefano Zampini noffd = a->B->cmap->N; 566c1a070e6SStefano Zampini dnnz = diag->nz; 567c1a070e6SStefano Zampini onnz = offd->nz; 568c1a070e6SStefano Zampini } else { 569c1a070e6SStefano Zampini diag = (Mat_SeqAIJ*)A->data; 570c1a070e6SStefano Zampini offd = NULL; 571c1a070e6SStefano Zampini garray = NULL; 572c1a070e6SStefano Zampini noffd = 0; 573c1a070e6SStefano Zampini dnnz = diag->nz; 574c1a070e6SStefano Zampini onnz = 0; 575c1a070e6SStefano Zampini } 576225daaf8SStefano Zampini 577c1a070e6SStefano Zampini /* create a temporary ParCSR */ 578c1a070e6SStefano Zampini if (HYPRE_AssumedPartitionCheck()) { 579c1a070e6SStefano Zampini PetscMPIInt myid; 580c1a070e6SStefano Zampini 581c1a070e6SStefano Zampini ierr = MPI_Comm_rank(comm,&myid);CHKERRQ(ierr); 582c1a070e6SStefano Zampini row_starts = A->rmap->range + myid; 583c1a070e6SStefano Zampini col_starts = A->cmap->range + myid; 584c1a070e6SStefano Zampini } else { 585c1a070e6SStefano Zampini row_starts = A->rmap->range; 586c1a070e6SStefano Zampini col_starts = A->cmap->range; 587c1a070e6SStefano Zampini } 5887d968826Sstefano_zampini tA = hypre_ParCSRMatrixCreate(comm,A->rmap->N,A->cmap->N,(HYPRE_Int*)row_starts,(HYPRE_Int*)col_starts,noffd,dnnz,onnz); 589c1a070e6SStefano Zampini hypre_ParCSRMatrixSetRowStartsOwner(tA,0); 590c1a070e6SStefano Zampini hypre_ParCSRMatrixSetColStartsOwner(tA,0); 591c1a070e6SStefano Zampini 592225daaf8SStefano Zampini /* set diagonal part */ 593c1a070e6SStefano Zampini hdiag = hypre_ParCSRMatrixDiag(tA); 5947d968826Sstefano_zampini hypre_CSRMatrixI(hdiag) = (HYPRE_Int*)diag->i; 5957d968826Sstefano_zampini hypre_CSRMatrixJ(hdiag) = (HYPRE_Int*)diag->j; 596c1a070e6SStefano Zampini hypre_CSRMatrixData(hdiag) = diag->a; 597c1a070e6SStefano Zampini hypre_CSRMatrixNumNonzeros(hdiag) = diag->nz; 598c1a070e6SStefano Zampini hypre_CSRMatrixSetRownnz(hdiag); 599c1a070e6SStefano Zampini hypre_CSRMatrixSetDataOwner(hdiag,0); 600c1a070e6SStefano Zampini 601225daaf8SStefano Zampini /* set offdiagonal part */ 602c1a070e6SStefano Zampini hoffd = hypre_ParCSRMatrixOffd(tA); 603c1a070e6SStefano Zampini if (offd) { 6047d968826Sstefano_zampini hypre_CSRMatrixI(hoffd) = (HYPRE_Int*)offd->i; 6057d968826Sstefano_zampini hypre_CSRMatrixJ(hoffd) = (HYPRE_Int*)offd->j; 606c1a070e6SStefano Zampini hypre_CSRMatrixData(hoffd) = offd->a; 607c1a070e6SStefano Zampini hypre_CSRMatrixNumNonzeros(hoffd) = offd->nz; 608c1a070e6SStefano Zampini hypre_CSRMatrixSetRownnz(hoffd); 609c1a070e6SStefano Zampini hypre_CSRMatrixSetDataOwner(hoffd,0); 610c1a070e6SStefano Zampini hypre_ParCSRMatrixSetNumNonzeros(tA); 6117d968826Sstefano_zampini hypre_ParCSRMatrixColMapOffd(tA) = (HYPRE_Int*)garray; 612c1a070e6SStefano Zampini } 613613e5ff0Sstefano_zampini *hA = tA; 614613e5ff0Sstefano_zampini PetscFunctionReturn(0); 615613e5ff0Sstefano_zampini } 616c1a070e6SStefano Zampini 617613e5ff0Sstefano_zampini #undef __FUNCT__ 618613e5ff0Sstefano_zampini #define __FUNCT__ "MatAIJRestoreParCSR_Private" 619613e5ff0Sstefano_zampini static PetscErrorCode MatAIJRestoreParCSR_Private(Mat A, hypre_ParCSRMatrix **hA) 620613e5ff0Sstefano_zampini { 621613e5ff0Sstefano_zampini hypre_CSRMatrix *hdiag,*hoffd; 622c1a070e6SStefano Zampini 623613e5ff0Sstefano_zampini PetscFunctionBegin; 624613e5ff0Sstefano_zampini hdiag = hypre_ParCSRMatrixDiag(*hA); 625613e5ff0Sstefano_zampini hoffd = hypre_ParCSRMatrixOffd(*hA); 626c1a070e6SStefano Zampini /* set pointers to NULL before destroying tA */ 627c1a070e6SStefano Zampini hypre_CSRMatrixI(hdiag) = NULL; 628c1a070e6SStefano Zampini hypre_CSRMatrixJ(hdiag) = NULL; 629c1a070e6SStefano Zampini hypre_CSRMatrixData(hdiag) = NULL; 630c1a070e6SStefano Zampini hypre_CSRMatrixI(hoffd) = NULL; 631c1a070e6SStefano Zampini hypre_CSRMatrixJ(hoffd) = NULL; 632c1a070e6SStefano Zampini hypre_CSRMatrixData(hoffd) = NULL; 633613e5ff0Sstefano_zampini hypre_ParCSRMatrixColMapOffd(*hA) = NULL; 634613e5ff0Sstefano_zampini hypre_ParCSRMatrixDestroy(*hA); 635613e5ff0Sstefano_zampini *hA = NULL; 636613e5ff0Sstefano_zampini PetscFunctionReturn(0); 637613e5ff0Sstefano_zampini } 638613e5ff0Sstefano_zampini 639613e5ff0Sstefano_zampini /* calls RAP from BoomerAMG: 640613e5ff0Sstefano_zampini the resulting ParCSR will not own the column and row starts */ 641613e5ff0Sstefano_zampini #undef __FUNCT__ 642613e5ff0Sstefano_zampini #define __FUNCT__ "MatHYPRE_ParCSR_RAP" 643613e5ff0Sstefano_zampini static PetscErrorCode MatHYPRE_ParCSR_RAP(hypre_ParCSRMatrix *hR, hypre_ParCSRMatrix *hA, 644613e5ff0Sstefano_zampini hypre_ParCSRMatrix *hP, hypre_ParCSRMatrix **hRAP) 645613e5ff0Sstefano_zampini { 646613e5ff0Sstefano_zampini PetscErrorCode ierr; 647613e5ff0Sstefano_zampini HYPRE_Int P_owns_col_starts,R_owns_row_starts; 648613e5ff0Sstefano_zampini 649613e5ff0Sstefano_zampini PetscFunctionBegin; 650613e5ff0Sstefano_zampini P_owns_col_starts = hypre_ParCSRMatrixOwnsColStarts(hP); 651613e5ff0Sstefano_zampini R_owns_row_starts = hypre_ParCSRMatrixOwnsRowStarts(hR); 652613e5ff0Sstefano_zampini PetscStackCallStandard(hypre_BoomerAMGBuildCoarseOperator,(hR,hA,hP,hRAP)); 653613e5ff0Sstefano_zampini PetscStackCallStandard(hypre_ParCSRMatrixSetNumNonzeros,(*hRAP)); 654613e5ff0Sstefano_zampini /* hypre_BoomerAMGBuildCoarseOperator steals the col_starts from P and the row_starts from R */ 655613e5ff0Sstefano_zampini hypre_ParCSRMatrixSetRowStartsOwner(*hRAP,0); 656613e5ff0Sstefano_zampini hypre_ParCSRMatrixSetColStartsOwner(*hRAP,0); 657613e5ff0Sstefano_zampini if (P_owns_col_starts) hypre_ParCSRMatrixSetColStartsOwner(hP,1); 658613e5ff0Sstefano_zampini if (R_owns_row_starts) hypre_ParCSRMatrixSetRowStartsOwner(hR,1); 659613e5ff0Sstefano_zampini PetscFunctionReturn(0); 660613e5ff0Sstefano_zampini } 661613e5ff0Sstefano_zampini 662613e5ff0Sstefano_zampini #undef __FUNCT__ 6636f231fbdSstefano_zampini #define __FUNCT__ "MatPtAPNumeric_AIJ_AIJ_wHYPRE" 6646f231fbdSstefano_zampini static PetscErrorCode MatPtAPNumeric_AIJ_AIJ_wHYPRE(Mat A,Mat P,Mat C) 665613e5ff0Sstefano_zampini { 6666f231fbdSstefano_zampini Mat B; 667613e5ff0Sstefano_zampini hypre_ParCSRMatrix *hA,*hP,*hPtAP; 668613e5ff0Sstefano_zampini PetscErrorCode ierr; 669613e5ff0Sstefano_zampini 670613e5ff0Sstefano_zampini PetscFunctionBegin; 671613e5ff0Sstefano_zampini ierr = MatAIJGetParCSR_Private(A,&hA);CHKERRQ(ierr); 672613e5ff0Sstefano_zampini ierr = MatAIJGetParCSR_Private(P,&hP);CHKERRQ(ierr); 673613e5ff0Sstefano_zampini ierr = MatHYPRE_ParCSR_RAP(hP,hA,hP,&hPtAP);CHKERRQ(ierr); 6746f231fbdSstefano_zampini ierr = MatCreateFromParCSR(hPtAP,MATAIJ,PETSC_OWN_POINTER,&B);CHKERRQ(ierr); 6756f231fbdSstefano_zampini ierr = MatHeaderMerge(C,&B);CHKERRQ(ierr); 676613e5ff0Sstefano_zampini ierr = MatAIJRestoreParCSR_Private(A,&hA);CHKERRQ(ierr); 677613e5ff0Sstefano_zampini ierr = MatAIJRestoreParCSR_Private(P,&hP);CHKERRQ(ierr); 6786f231fbdSstefano_zampini PetscFunctionReturn(0); 6796f231fbdSstefano_zampini } 6806f231fbdSstefano_zampini 6816f231fbdSstefano_zampini #undef __FUNCT__ 6826f231fbdSstefano_zampini #define __FUNCT__ "MatPtAPSymbolic_AIJ_AIJ_wHYPRE" 6836f231fbdSstefano_zampini PETSC_INTERN PetscErrorCode MatPtAPSymbolic_AIJ_AIJ_wHYPRE(Mat A,Mat P,PetscReal fill,Mat *C) 6846f231fbdSstefano_zampini { 6856f231fbdSstefano_zampini PetscErrorCode ierr; 6866f231fbdSstefano_zampini PetscFunctionBegin; 6876f231fbdSstefano_zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),C);CHKERRQ(ierr); 6886f231fbdSstefano_zampini ierr = MatSetType(*C,MATAIJ);CHKERRQ(ierr); 6896f231fbdSstefano_zampini (*C)->ops->ptapnumeric = MatPtAPNumeric_AIJ_AIJ_wHYPRE; 690613e5ff0Sstefano_zampini PetscFunctionReturn(0); 691613e5ff0Sstefano_zampini } 692613e5ff0Sstefano_zampini 693613e5ff0Sstefano_zampini #undef __FUNCT__ 6944cc28894Sstefano_zampini #define __FUNCT__ "MatPtAPNumeric_AIJ_HYPRE" 6954cc28894Sstefano_zampini static PetscErrorCode MatPtAPNumeric_AIJ_HYPRE(Mat A,Mat P,Mat C) 696613e5ff0Sstefano_zampini { 6974cc28894Sstefano_zampini Mat B; 6984cc28894Sstefano_zampini Mat_HYPRE *hP; 699613e5ff0Sstefano_zampini hypre_ParCSRMatrix *hA = NULL,*Pparcsr,*ptapparcsr; 700613e5ff0Sstefano_zampini HYPRE_Int type; 701613e5ff0Sstefano_zampini MPI_Comm comm = PetscObjectComm((PetscObject)A); 7024cc28894Sstefano_zampini PetscBool ishypre; 703613e5ff0Sstefano_zampini PetscErrorCode ierr; 704613e5ff0Sstefano_zampini 705613e5ff0Sstefano_zampini PetscFunctionBegin; 7064cc28894Sstefano_zampini ierr = PetscObjectTypeCompare((PetscObject)P,MATHYPRE,&ishypre);CHKERRQ(ierr); 7074cc28894Sstefano_zampini if (!ishypre) SETERRQ1(comm,PETSC_ERR_USER,"P should be of type %s",MATHYPRE); 7084cc28894Sstefano_zampini hP = (Mat_HYPRE*)P->data; 709613e5ff0Sstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(hP->ij,&type)); 710613e5ff0Sstefano_zampini if (type != HYPRE_PARCSR) SETERRQ(comm,PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported"); 711613e5ff0Sstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixGetObject,(hP->ij,(void**)&Pparcsr)); 712613e5ff0Sstefano_zampini 713613e5ff0Sstefano_zampini /* It looks like we don't need to have the diagonal entries 714613e5ff0Sstefano_zampini ordered first in the rows of the diagonal part 715613e5ff0Sstefano_zampini for boomerAMGBuildCoarseOperator to work */ 716613e5ff0Sstefano_zampini ierr = MatAIJGetParCSR_Private(A,&hA);CHKERRQ(ierr); 717613e5ff0Sstefano_zampini ierr = MatHYPRE_ParCSR_RAP(Pparcsr,hA,Pparcsr,&ptapparcsr);CHKERRQ(ierr); 718613e5ff0Sstefano_zampini ierr = MatAIJRestoreParCSR_Private(A,&hA);CHKERRQ(ierr); 719225daaf8SStefano Zampini 7204cc28894Sstefano_zampini /* create temporary matrix and merge to C */ 7214cc28894Sstefano_zampini ierr = MatCreateFromParCSR(ptapparcsr,((PetscObject)C)->type_name,PETSC_OWN_POINTER,&B);CHKERRQ(ierr); 7224cc28894Sstefano_zampini ierr = MatHeaderMerge(C,&B);CHKERRQ(ierr); 7234cc28894Sstefano_zampini PetscFunctionReturn(0); 7244cc28894Sstefano_zampini } 7254cc28894Sstefano_zampini 7264cc28894Sstefano_zampini #undef __FUNCT__ 7274cc28894Sstefano_zampini #define __FUNCT__ "MatPtAP_AIJ_HYPRE" 7284cc28894Sstefano_zampini static PetscErrorCode MatPtAP_AIJ_HYPRE(Mat A,Mat P,MatReuse scall,PetscReal fill,Mat *C) 7294cc28894Sstefano_zampini { 7304cc28894Sstefano_zampini PetscErrorCode ierr; 7314cc28894Sstefano_zampini 7324cc28894Sstefano_zampini PetscFunctionBegin; 7334cc28894Sstefano_zampini if (scall == MAT_INITIAL_MATRIX) { 7344cc28894Sstefano_zampini const char *deft = MATAIJ; 7354cc28894Sstefano_zampini char type[256]; 7364cc28894Sstefano_zampini PetscBool flg; 7374cc28894Sstefano_zampini 7384cc28894Sstefano_zampini ierr = PetscObjectOptionsBegin((PetscObject)A);CHKERRQ(ierr); 7394cc28894Sstefano_zampini ierr = PetscOptionsFList("-matptap_hypre_outtype","Matrix type",NULL,MatList,deft,type,256,&flg);CHKERRQ(ierr); 7404cc28894Sstefano_zampini ierr = PetscOptionsEnd();CHKERRQ(ierr); 7414cc28894Sstefano_zampini ierr = PetscLogEventBegin(MAT_PtAPSymbolic,A,P,0,0);CHKERRQ(ierr); 7424cc28894Sstefano_zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),C);CHKERRQ(ierr); 7434cc28894Sstefano_zampini if (flg) { 7444cc28894Sstefano_zampini ierr = MatSetType(*C,type);CHKERRQ(ierr); 7454cc28894Sstefano_zampini } else { 7464cc28894Sstefano_zampini ierr = MatSetType(*C,deft);CHKERRQ(ierr); 7474cc28894Sstefano_zampini } 7484cc28894Sstefano_zampini (*C)->ops->ptapnumeric = MatPtAPNumeric_AIJ_HYPRE; 7494cc28894Sstefano_zampini ierr = PetscLogEventEnd(MAT_PtAPSymbolic,A,P,0,0);CHKERRQ(ierr); 7504cc28894Sstefano_zampini } 7514cc28894Sstefano_zampini ierr = PetscLogEventBegin(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr); 7524cc28894Sstefano_zampini ierr = (*(*C)->ops->ptapnumeric)(A,P,*C);CHKERRQ(ierr); 753613e5ff0Sstefano_zampini ierr = PetscLogEventEnd(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr); 754c1a070e6SStefano Zampini PetscFunctionReturn(0); 755c1a070e6SStefano Zampini } 756c1a070e6SStefano Zampini 757c1a070e6SStefano Zampini #undef __FUNCT__ 7584cc28894Sstefano_zampini #define __FUNCT__ "MatPtAPNumeric_HYPRE_HYPRE" 7594cc28894Sstefano_zampini static PetscErrorCode MatPtAPNumeric_HYPRE_HYPRE(Mat A,Mat P,Mat C) 7604cc28894Sstefano_zampini { 7614cc28894Sstefano_zampini Mat B; 7624cc28894Sstefano_zampini hypre_ParCSRMatrix *Aparcsr,*Pparcsr,*ptapparcsr; 7634cc28894Sstefano_zampini Mat_HYPRE *hA,*hP; 7644cc28894Sstefano_zampini PetscBool ishypre; 7654cc28894Sstefano_zampini HYPRE_Int type; 7664cc28894Sstefano_zampini PetscErrorCode ierr; 7674cc28894Sstefano_zampini 7684cc28894Sstefano_zampini PetscFunctionBegin; 7694cc28894Sstefano_zampini ierr = PetscObjectTypeCompare((PetscObject)P,MATHYPRE,&ishypre);CHKERRQ(ierr); 7704cc28894Sstefano_zampini if (!ishypre) SETERRQ1(PetscObjectComm((PetscObject)P),PETSC_ERR_USER,"P should be of type %s",MATHYPRE); 7714cc28894Sstefano_zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATHYPRE,&ishypre);CHKERRQ(ierr); 7724cc28894Sstefano_zampini if (!ishypre) SETERRQ1(PetscObjectComm((PetscObject)A),PETSC_ERR_USER,"A should be of type %s",MATHYPRE); 7734cc28894Sstefano_zampini hA = (Mat_HYPRE*)A->data; 7744cc28894Sstefano_zampini hP = (Mat_HYPRE*)P->data; 7754cc28894Sstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(hA->ij,&type)); 7764cc28894Sstefano_zampini if (type != HYPRE_PARCSR) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported"); 7774cc28894Sstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(hP->ij,&type)); 7784cc28894Sstefano_zampini if (type != HYPRE_PARCSR) SETERRQ(PetscObjectComm((PetscObject)P),PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported"); 7794cc28894Sstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixGetObject,(hA->ij,(void**)&Aparcsr)); 7804cc28894Sstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixGetObject,(hP->ij,(void**)&Pparcsr)); 7814cc28894Sstefano_zampini ierr = MatHYPRE_ParCSR_RAP(Pparcsr,Aparcsr,Pparcsr,&ptapparcsr);CHKERRQ(ierr); 7824cc28894Sstefano_zampini ierr = MatCreateFromParCSR(ptapparcsr,MATHYPRE,PETSC_OWN_POINTER,&B);CHKERRQ(ierr); 7834cc28894Sstefano_zampini ierr = MatHeaderMerge(C,&B);CHKERRQ(ierr); 7844cc28894Sstefano_zampini PetscFunctionReturn(0); 7854cc28894Sstefano_zampini } 7864cc28894Sstefano_zampini 7874cc28894Sstefano_zampini #undef __FUNCT__ 788cd8bc7baSStefano Zampini #define __FUNCT__ "MatPtAP_HYPRE_HYPRE" 789cd8bc7baSStefano Zampini static PetscErrorCode MatPtAP_HYPRE_HYPRE(Mat A,Mat P,MatReuse scall,PetscReal fill,Mat *C) 790cd8bc7baSStefano Zampini { 791cd8bc7baSStefano Zampini PetscErrorCode ierr; 792cd8bc7baSStefano Zampini 793cd8bc7baSStefano Zampini PetscFunctionBegin; 7944cc28894Sstefano_zampini if (scall == MAT_INITIAL_MATRIX) { 7954cc28894Sstefano_zampini ierr = PetscLogEventBegin(MAT_PtAPSymbolic,A,P,0,0);CHKERRQ(ierr); 7964cc28894Sstefano_zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),C);CHKERRQ(ierr); 7974cc28894Sstefano_zampini ierr = MatSetType(*C,MATHYPRE);CHKERRQ(ierr); 7984cc28894Sstefano_zampini (*C)->ops->ptapnumeric = MatPtAPNumeric_HYPRE_HYPRE; 7994cc28894Sstefano_zampini ierr = PetscLogEventEnd(MAT_PtAPSymbolic,A,P,0,0);CHKERRQ(ierr); 8004cc28894Sstefano_zampini } 801613e5ff0Sstefano_zampini ierr = PetscLogEventBegin(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr); 8024cc28894Sstefano_zampini ierr = (*(*C)->ops->ptapnumeric)(A,P,*C);CHKERRQ(ierr); 803613e5ff0Sstefano_zampini ierr = PetscLogEventEnd(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr); 804cd8bc7baSStefano Zampini PetscFunctionReturn(0); 805cd8bc7baSStefano Zampini } 806cd8bc7baSStefano Zampini 807cd8bc7baSStefano Zampini #undef __FUNCT__ 8085e5acdf2Sstefano_zampini #define __FUNCT__ "MatMatMultNumeric_AIJ_AIJ_wHYPRE" 8095e5acdf2Sstefano_zampini static PetscErrorCode MatMatMultNumeric_AIJ_AIJ_wHYPRE(Mat A,Mat B,Mat C) 8105e5acdf2Sstefano_zampini { 8115e5acdf2Sstefano_zampini Mat D; 8125e5acdf2Sstefano_zampini hypre_ParCSRMatrix *hA,*hB,*hAB; 8135e5acdf2Sstefano_zampini PetscErrorCode ierr; 8145e5acdf2Sstefano_zampini 8155e5acdf2Sstefano_zampini PetscFunctionBegin; 8165e5acdf2Sstefano_zampini ierr = MatAIJGetParCSR_Private(A,&hA);CHKERRQ(ierr); 8175e5acdf2Sstefano_zampini ierr = MatAIJGetParCSR_Private(B,&hB);CHKERRQ(ierr); 8185e5acdf2Sstefano_zampini PetscStackPush("hypre_ParMatmul"); 8195e5acdf2Sstefano_zampini hAB = hypre_ParMatmul(hA,hB); 8205e5acdf2Sstefano_zampini PetscStackPop; 8215e5acdf2Sstefano_zampini ierr = MatCreateFromParCSR(hAB,MATAIJ,PETSC_OWN_POINTER,&D);CHKERRQ(ierr); 8225e5acdf2Sstefano_zampini ierr = MatHeaderMerge(C,&D);CHKERRQ(ierr); 8235e5acdf2Sstefano_zampini ierr = MatAIJRestoreParCSR_Private(A,&hA);CHKERRQ(ierr); 8245e5acdf2Sstefano_zampini ierr = MatAIJRestoreParCSR_Private(B,&hB);CHKERRQ(ierr); 8255e5acdf2Sstefano_zampini PetscFunctionReturn(0); 8265e5acdf2Sstefano_zampini } 8275e5acdf2Sstefano_zampini 8285e5acdf2Sstefano_zampini #undef __FUNCT__ 8295e5acdf2Sstefano_zampini #define __FUNCT__ "MatMatMultSymbolic_AIJ_AIJ_wHYPRE" 8305e5acdf2Sstefano_zampini PETSC_INTERN PetscErrorCode MatMatMultSymbolic_AIJ_AIJ_wHYPRE(Mat A,Mat B,PetscReal fill,Mat *C) 8315e5acdf2Sstefano_zampini { 8325e5acdf2Sstefano_zampini PetscErrorCode ierr; 833*20e1dc0dSstefano_zampini 8345e5acdf2Sstefano_zampini PetscFunctionBegin; 8355e5acdf2Sstefano_zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),C);CHKERRQ(ierr); 8365e5acdf2Sstefano_zampini ierr = MatSetType(*C,MATAIJ);CHKERRQ(ierr); 8375e5acdf2Sstefano_zampini (*C)->ops->matmultnumeric = MatMatMultNumeric_AIJ_AIJ_wHYPRE; 8385e5acdf2Sstefano_zampini PetscFunctionReturn(0); 8395e5acdf2Sstefano_zampini } 8405e5acdf2Sstefano_zampini 8415e5acdf2Sstefano_zampini #undef __FUNCT__ 842*20e1dc0dSstefano_zampini #define __FUNCT__ "MatMatMatMultNumeric_AIJ_AIJ_AIJ_wHYPRE" 843*20e1dc0dSstefano_zampini static PetscErrorCode MatMatMatMultNumeric_AIJ_AIJ_AIJ_wHYPRE(Mat A,Mat B,Mat C,Mat D) 844*20e1dc0dSstefano_zampini { 845*20e1dc0dSstefano_zampini Mat E; 846*20e1dc0dSstefano_zampini hypre_ParCSRMatrix *hA,*hB,*hC,*hABC; 847*20e1dc0dSstefano_zampini PetscErrorCode ierr; 848*20e1dc0dSstefano_zampini 849*20e1dc0dSstefano_zampini PetscFunctionBegin; 850*20e1dc0dSstefano_zampini ierr = MatAIJGetParCSR_Private(A,&hA);CHKERRQ(ierr); 851*20e1dc0dSstefano_zampini ierr = MatAIJGetParCSR_Private(B,&hB);CHKERRQ(ierr); 852*20e1dc0dSstefano_zampini ierr = MatAIJGetParCSR_Private(C,&hC);CHKERRQ(ierr); 853*20e1dc0dSstefano_zampini ierr = MatHYPRE_ParCSR_RAP(hA,hB,hC,&hABC);CHKERRQ(ierr); 854*20e1dc0dSstefano_zampini ierr = MatCreateFromParCSR(hABC,MATAIJ,PETSC_OWN_POINTER,&E);CHKERRQ(ierr); 855*20e1dc0dSstefano_zampini ierr = MatHeaderMerge(D,&E);CHKERRQ(ierr); 856*20e1dc0dSstefano_zampini ierr = MatAIJRestoreParCSR_Private(A,&hA);CHKERRQ(ierr); 857*20e1dc0dSstefano_zampini ierr = MatAIJRestoreParCSR_Private(B,&hB);CHKERRQ(ierr); 858*20e1dc0dSstefano_zampini ierr = MatAIJRestoreParCSR_Private(C,&hC);CHKERRQ(ierr); 859*20e1dc0dSstefano_zampini PetscFunctionReturn(0); 860*20e1dc0dSstefano_zampini } 861*20e1dc0dSstefano_zampini 862*20e1dc0dSstefano_zampini #undef __FUNCT__ 863*20e1dc0dSstefano_zampini #define __FUNCT__ "MatMatMatMultSymbolic_AIJ_AIJ_AIJ_wHYPRE" 864*20e1dc0dSstefano_zampini PETSC_INTERN PetscErrorCode MatMatMatMultSymbolic_AIJ_AIJ_AIJ_wHYPRE(Mat A,Mat B,Mat C,PetscReal fill,Mat *D) 865*20e1dc0dSstefano_zampini { 866*20e1dc0dSstefano_zampini PetscErrorCode ierr; 867*20e1dc0dSstefano_zampini 868*20e1dc0dSstefano_zampini PetscFunctionBegin; 869*20e1dc0dSstefano_zampini ierr = MatCreate(PetscObjectComm((PetscObject)A),D);CHKERRQ(ierr); 870*20e1dc0dSstefano_zampini ierr = MatSetType(*D,MATAIJ);CHKERRQ(ierr); 871*20e1dc0dSstefano_zampini (*D)->ops->matmatmultnumeric = MatMatMatMultNumeric_AIJ_AIJ_AIJ_wHYPRE; 872*20e1dc0dSstefano_zampini PetscFunctionReturn(0); 873*20e1dc0dSstefano_zampini } 874*20e1dc0dSstefano_zampini 875*20e1dc0dSstefano_zampini #undef __FUNCT__ 87663c07aadSStefano Zampini #define __FUNCT__ "MatMultTranspose_HYPRE" 877ea9daf28SStefano Zampini static PetscErrorCode MatMultTranspose_HYPRE(Mat A, Vec x, Vec y) 87863c07aadSStefano Zampini { 87963c07aadSStefano Zampini PetscErrorCode ierr; 88063c07aadSStefano Zampini 88163c07aadSStefano Zampini PetscFunctionBegin; 88263c07aadSStefano Zampini ierr = MatHYPRE_MultKernel_Private(A,x,y,PETSC_TRUE);CHKERRQ(ierr); 88363c07aadSStefano Zampini PetscFunctionReturn(0); 88463c07aadSStefano Zampini } 88563c07aadSStefano Zampini 88663c07aadSStefano Zampini #undef __FUNCT__ 88763c07aadSStefano Zampini #define __FUNCT__ "MatMult_HYPRE" 888ea9daf28SStefano Zampini static PetscErrorCode MatMult_HYPRE(Mat A, Vec x, Vec y) 88963c07aadSStefano Zampini { 89063c07aadSStefano Zampini PetscErrorCode ierr; 89163c07aadSStefano Zampini 89263c07aadSStefano Zampini PetscFunctionBegin; 89363c07aadSStefano Zampini ierr = MatHYPRE_MultKernel_Private(A,x,y,PETSC_FALSE);CHKERRQ(ierr); 89463c07aadSStefano Zampini PetscFunctionReturn(0); 89563c07aadSStefano Zampini } 89663c07aadSStefano Zampini 89763c07aadSStefano Zampini #undef __FUNCT__ 89863c07aadSStefano Zampini #define __FUNCT__ "MatHYPRE_MultKernel_Private" 899ea9daf28SStefano Zampini static PetscErrorCode MatHYPRE_MultKernel_Private(Mat A, Vec x, Vec y, PetscBool trans) 90063c07aadSStefano Zampini { 90163c07aadSStefano Zampini Mat_HYPRE *hA = (Mat_HYPRE*)A->data; 90263c07aadSStefano Zampini hypre_ParCSRMatrix *parcsr; 90363c07aadSStefano Zampini hypre_ParVector *hx,*hy; 90463c07aadSStefano Zampini PetscScalar *ax,*ay,*sax,*say; 90563c07aadSStefano Zampini PetscErrorCode ierr; 90663c07aadSStefano Zampini 90763c07aadSStefano Zampini PetscFunctionBegin; 90863c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixGetObject,(hA->ij,(void**)&parcsr)); 90963c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJVectorGetObject,(hA->x,(void**)&hx)); 91063c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJVectorGetObject,(hA->b,(void**)&hy)); 91163c07aadSStefano Zampini ierr = VecGetArrayRead(x,(const PetscScalar**)&ax);CHKERRQ(ierr); 91263c07aadSStefano Zampini ierr = VecGetArray(y,&ay);CHKERRQ(ierr); 91363c07aadSStefano Zampini if (trans) { 91458968eb6SStefano Zampini VecHYPRE_ParVectorReplacePointer(hA->x,ay,say); 91558968eb6SStefano Zampini VecHYPRE_ParVectorReplacePointer(hA->b,ax,sax); 91663c07aadSStefano Zampini hypre_ParCSRMatrixMatvecT(1.,parcsr,hy,0.,hx); 91758968eb6SStefano Zampini VecHYPRE_ParVectorReplacePointer(hA->x,say,ay); 91858968eb6SStefano Zampini VecHYPRE_ParVectorReplacePointer(hA->b,sax,ax); 91963c07aadSStefano Zampini } else { 92058968eb6SStefano Zampini VecHYPRE_ParVectorReplacePointer(hA->x,ax,sax); 92158968eb6SStefano Zampini VecHYPRE_ParVectorReplacePointer(hA->b,ay,say); 92263c07aadSStefano Zampini hypre_ParCSRMatrixMatvec(1.,parcsr,hx,0.,hy); 92358968eb6SStefano Zampini VecHYPRE_ParVectorReplacePointer(hA->x,sax,ax); 92458968eb6SStefano Zampini VecHYPRE_ParVectorReplacePointer(hA->b,say,ay); 92563c07aadSStefano Zampini } 92663c07aadSStefano Zampini ierr = VecRestoreArrayRead(x,(const PetscScalar**)&ax);CHKERRQ(ierr); 92763c07aadSStefano Zampini ierr = VecRestoreArray(y,&ay);CHKERRQ(ierr); 92863c07aadSStefano Zampini PetscFunctionReturn(0); 92963c07aadSStefano Zampini } 93063c07aadSStefano Zampini 93163c07aadSStefano Zampini #undef __FUNCT__ 93263c07aadSStefano Zampini #define __FUNCT__ "MatDestroy_HYPRE" 933ea9daf28SStefano Zampini static PetscErrorCode MatDestroy_HYPRE(Mat A) 93463c07aadSStefano Zampini { 93563c07aadSStefano Zampini Mat_HYPRE *hA = (Mat_HYPRE*)A->data; 93663c07aadSStefano Zampini PetscErrorCode ierr; 93763c07aadSStefano Zampini 93863c07aadSStefano Zampini PetscFunctionBegin; 93963c07aadSStefano Zampini if (hA->x) PetscStackCallStandard(HYPRE_IJVectorDestroy,(hA->x)); 94063c07aadSStefano Zampini if (hA->b) PetscStackCallStandard(HYPRE_IJVectorDestroy,(hA->b)); 941978814f1SStefano Zampini if (hA->ij) { 942978814f1SStefano Zampini if (!hA->inner_free) hypre_IJMatrixObject(hA->ij) = NULL; 943978814f1SStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixDestroy,(hA->ij)); 944978814f1SStefano Zampini } 94563c07aadSStefano Zampini if (hA->comm) { ierr = MPI_Comm_free(&hA->comm);CHKERRQ(ierr); } 94663c07aadSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatConvert_hypre_aij_C",NULL);CHKERRQ(ierr); 9472df22349SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatConvert_hypre_is_C",NULL);CHKERRQ(ierr); 948c1a070e6SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatPtAP_seqaij_hypre_C",NULL);CHKERRQ(ierr); 949c1a070e6SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatPtAP_mpiaij_hypre_C",NULL);CHKERRQ(ierr); 950d975228cSstefano_zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatHYPRESetPreallocation_C",NULL);CHKERRQ(ierr); 951dd9c0a25Sstefano_zampini ierr = PetscObjectComposeFunction((PetscObject)A,"MatHYPREGetParCSR_C",NULL);CHKERRQ(ierr); 95263c07aadSStefano Zampini ierr = PetscFree(A->data);CHKERRQ(ierr); 95363c07aadSStefano Zampini PetscFunctionReturn(0); 95463c07aadSStefano Zampini } 95563c07aadSStefano Zampini 95663c07aadSStefano Zampini #undef __FUNCT__ 95763c07aadSStefano Zampini #define __FUNCT__ "MatSetUp_HYPRE" 958ea9daf28SStefano Zampini static PetscErrorCode MatSetUp_HYPRE(Mat A) 95963c07aadSStefano Zampini { 9604ec6421dSstefano_zampini PetscErrorCode ierr; 9614ec6421dSstefano_zampini 9624ec6421dSstefano_zampini PetscFunctionBegin; 9634ec6421dSstefano_zampini ierr = MatHYPRESetPreallocation(A,PETSC_DEFAULT,NULL,PETSC_DEFAULT,NULL);CHKERRQ(ierr); 9644ec6421dSstefano_zampini PetscFunctionReturn(0); 9654ec6421dSstefano_zampini } 9664ec6421dSstefano_zampini 9674ec6421dSstefano_zampini #undef __FUNCT__ 9684ec6421dSstefano_zampini #define __FUNCT__ "MatAssemblyEnd_HYPRE" 9694ec6421dSstefano_zampini static PetscErrorCode MatAssemblyEnd_HYPRE(Mat A, MatAssemblyType mode) 9704ec6421dSstefano_zampini { 97163c07aadSStefano Zampini Mat_HYPRE *hA = (Mat_HYPRE*)A->data; 97263c07aadSStefano Zampini Vec x,b; 97363c07aadSStefano Zampini PetscErrorCode ierr; 97463c07aadSStefano Zampini 97563c07aadSStefano Zampini PetscFunctionBegin; 9764ec6421dSstefano_zampini if (mode == MAT_FLUSH_ASSEMBLY) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MAT_FLUSH_ASSEMBLY currently not supported with MATHYPRE"); 9774ec6421dSstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixAssemble,(hA->ij)); 97863c07aadSStefano Zampini if (hA->x) PetscFunctionReturn(0); 97963c07aadSStefano Zampini ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr); 98063c07aadSStefano Zampini ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr); 98163c07aadSStefano Zampini ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),1,A->cmap->n,A->cmap->N,NULL,&x);CHKERRQ(ierr); 98263c07aadSStefano Zampini ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),1,A->rmap->n,A->rmap->N,NULL,&b);CHKERRQ(ierr); 98363c07aadSStefano Zampini ierr = VecHYPRE_IJVectorCreate(x,&hA->x);CHKERRQ(ierr); 98463c07aadSStefano Zampini ierr = VecHYPRE_IJVectorCreate(b,&hA->b);CHKERRQ(ierr); 98563c07aadSStefano Zampini ierr = VecDestroy(&x);CHKERRQ(ierr); 98663c07aadSStefano Zampini ierr = VecDestroy(&b);CHKERRQ(ierr); 98763c07aadSStefano Zampini PetscFunctionReturn(0); 98863c07aadSStefano Zampini } 98963c07aadSStefano Zampini 990d975228cSstefano_zampini #define MATHYPRE_SCRATCH 2048 991d975228cSstefano_zampini 992d975228cSstefano_zampini #undef __FUNCT__ 993d975228cSstefano_zampini #define __FUNCT__ "MatSetValues_HYPRE" 994d975228cSstefano_zampini PetscErrorCode MatSetValues_HYPRE(Mat A, PetscInt nr, const PetscInt rows[], PetscInt nc, const PetscInt cols[], const PetscScalar v[], InsertMode ins) 995d975228cSstefano_zampini { 996d975228cSstefano_zampini Mat_HYPRE *hA = (Mat_HYPRE*)A->data; 997d975228cSstefano_zampini PetscScalar *vals = (PetscScalar *)v; 998d975228cSstefano_zampini PetscScalar sscr[MATHYPRE_SCRATCH]; 9997d968826Sstefano_zampini HYPRE_Int cscr[2][MATHYPRE_SCRATCH]; 10007d968826Sstefano_zampini HYPRE_Int i,nzc; 1001d975228cSstefano_zampini PetscErrorCode ierr; 1002d975228cSstefano_zampini 1003d975228cSstefano_zampini PetscFunctionBegin; 1004d975228cSstefano_zampini for (i=0,nzc=0;i<nc;i++) { 1005d975228cSstefano_zampini if (cols[i] >= 0) { 1006d975228cSstefano_zampini cscr[0][nzc ] = cols[i]; 1007d975228cSstefano_zampini cscr[1][nzc++] = i; 1008d975228cSstefano_zampini } 1009d975228cSstefano_zampini } 1010d975228cSstefano_zampini if (!nzc) PetscFunctionReturn(0); 1011d975228cSstefano_zampini 1012d975228cSstefano_zampini if (ins == ADD_VALUES) { 1013d975228cSstefano_zampini for (i=0;i<nr;i++) { 1014d975228cSstefano_zampini if (rows[i] >= 0) { 1015d975228cSstefano_zampini PetscInt j; 1016d975228cSstefano_zampini for (j=0;j<nzc;j++) sscr[j] = vals[cscr[1][j]]; 10177d968826Sstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixAddToValues,(hA->ij,1,&nzc,(HYPRE_Int*)(rows+i),cscr[0],sscr)); 1018d975228cSstefano_zampini } 1019d975228cSstefano_zampini vals += nc; 1020d975228cSstefano_zampini } 1021d975228cSstefano_zampini } else { /* INSERT_VALUES */ 1022d975228cSstefano_zampini #if defined(PETSC_USE_DEBUG) 1023d975228cSstefano_zampini /* Insert values cannot be used to insert offproc entries */ 1024d975228cSstefano_zampini PetscInt rst,ren; 1025d975228cSstefano_zampini ierr = MatGetOwnershipRange(A,&rst,&ren);CHKERRQ(ierr); 1026d975228cSstefano_zampini for (i=0;i<nr;i++) 1027d975228cSstefano_zampini if (rows[i] >= 0 && (rows[i] < rst || rows[i] >= ren)) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use INSERT_VALUES for off-proc entries with MatHYPRE. Use ADD_VALUES instead"); 1028d975228cSstefano_zampini #endif 1029d975228cSstefano_zampini for (i=0;i<nr;i++) { 1030d975228cSstefano_zampini if (rows[i] >= 0) { 1031d975228cSstefano_zampini PetscInt j; 1032d975228cSstefano_zampini for (j=0;j<nzc;j++) sscr[j] = vals[cscr[1][j]]; 10337d968826Sstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixSetValues,(hA->ij,1,&nzc,(HYPRE_Int*)(rows+i),cscr[0],sscr)); 1034d975228cSstefano_zampini } 1035d975228cSstefano_zampini vals += nc; 1036d975228cSstefano_zampini } 1037d975228cSstefano_zampini } 1038d975228cSstefano_zampini PetscFunctionReturn(0); 1039d975228cSstefano_zampini } 1040d975228cSstefano_zampini 1041d975228cSstefano_zampini #undef __FUNCT__ 1042d975228cSstefano_zampini #define __FUNCT__ "MatHYPRESetPreallocation_HYPRE" 1043d975228cSstefano_zampini static PetscErrorCode MatHYPRESetPreallocation_HYPRE(Mat A, PetscInt dnz, const PetscInt dnnz[], PetscInt onz, const PetscInt onnz[]) 1044d975228cSstefano_zampini { 1045d975228cSstefano_zampini Mat_HYPRE *hA = (Mat_HYPRE*)A->data; 10467d968826Sstefano_zampini HYPRE_Int *hdnnz,*honnz; 104706a29025Sstefano_zampini PetscInt i,rs,re,cs,ce,bs; 1048d975228cSstefano_zampini PetscMPIInt size; 1049d975228cSstefano_zampini PetscErrorCode ierr; 1050d975228cSstefano_zampini 1051d975228cSstefano_zampini PetscFunctionBegin; 105206a29025Sstefano_zampini ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr); 1053d975228cSstefano_zampini ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr); 1054d975228cSstefano_zampini ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr); 1055d975228cSstefano_zampini rs = A->rmap->rstart; 1056d975228cSstefano_zampini re = A->rmap->rend; 1057d975228cSstefano_zampini cs = A->cmap->rstart; 1058d975228cSstefano_zampini ce = A->cmap->rend; 1059d975228cSstefano_zampini if (!hA->ij) { 1060d975228cSstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixCreate,(hA->comm,rs,re-1,cs,ce-1,&hA->ij)); 1061d975228cSstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixSetObjectType,(hA->ij,HYPRE_PARCSR)); 1062d975228cSstefano_zampini } else { 10637d968826Sstefano_zampini HYPRE_Int hrs,hre,hcs,hce; 1064d975228cSstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixGetLocalRange,(hA->ij,&hrs,&hre,&hcs,&hce)); 1065d975228cSstefano_zampini if (hre-hrs+1 != re -rs) SETERRQ4(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Inconsistent local rows: IJMatrix [%D,%D), PETSc [%D,%d)",hrs,hre+1,rs,re); 1066d975228cSstefano_zampini if (hce-hcs+1 != ce -cs) SETERRQ4(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Inconsistent local cols: IJMatrix [%D,%D), PETSc [%D,%d)",hcs,hce+1,cs,ce); 1067d975228cSstefano_zampini } 1068d975228cSstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixInitialize,(hA->ij)); 1069d975228cSstefano_zampini 107006a29025Sstefano_zampini if (dnz == PETSC_DEFAULT || dnz == PETSC_DECIDE) dnz = 10*bs; 107106a29025Sstefano_zampini if (onz == PETSC_DEFAULT || onz == PETSC_DECIDE) onz = 10*bs; 107206a29025Sstefano_zampini 1073d975228cSstefano_zampini if (!dnnz) { 1074d975228cSstefano_zampini ierr = PetscMalloc1(A->rmap->n,&hdnnz);CHKERRQ(ierr); 1075d975228cSstefano_zampini for (i=0;i<A->rmap->n;i++) hdnnz[i] = dnz; 1076d975228cSstefano_zampini } else { 10777d968826Sstefano_zampini hdnnz = (HYPRE_Int*)dnnz; 1078d975228cSstefano_zampini } 1079d975228cSstefano_zampini ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRQ(ierr); 1080d975228cSstefano_zampini if (size > 1) { 1081d975228cSstefano_zampini if (!onnz) { 1082d975228cSstefano_zampini ierr = PetscMalloc1(A->rmap->n,&honnz);CHKERRQ(ierr); 1083d975228cSstefano_zampini for (i=0;i<A->rmap->n;i++) honnz[i] = onz; 1084d975228cSstefano_zampini } else { 10857d968826Sstefano_zampini honnz = (HYPRE_Int*)onnz; 1086d975228cSstefano_zampini } 1087d975228cSstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixSetDiagOffdSizes,(hA->ij,hdnnz,honnz)); 1088d975228cSstefano_zampini } else { 1089d975228cSstefano_zampini honnz = NULL; 1090d975228cSstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixSetRowSizes,(hA->ij,hdnnz)); 1091d975228cSstefano_zampini } 1092d975228cSstefano_zampini if (!dnnz) { 1093d975228cSstefano_zampini ierr = PetscFree(hdnnz);CHKERRQ(ierr); 1094d975228cSstefano_zampini } 1095d975228cSstefano_zampini if (!onnz && honnz) { 1096d975228cSstefano_zampini ierr = PetscFree(honnz);CHKERRQ(ierr); 1097d975228cSstefano_zampini } 109806a29025Sstefano_zampini A->preallocated = PETSC_TRUE; 1099d975228cSstefano_zampini 1100d975228cSstefano_zampini /* SetDiagOffdSizes sets hypre_AuxParCSRMatrixNeedAux(aux_matrix) = 0 */ 1101d975228cSstefano_zampini { 1102d975228cSstefano_zampini hypre_AuxParCSRMatrix *aux_matrix; 1103d975228cSstefano_zampini aux_matrix = (hypre_AuxParCSRMatrix*)hypre_IJMatrixTranslator(hA->ij); 1104d975228cSstefano_zampini hypre_AuxParCSRMatrixNeedAux(aux_matrix) = 1; 1105d975228cSstefano_zampini } 1106d975228cSstefano_zampini PetscFunctionReturn(0); 1107d975228cSstefano_zampini } 1108d975228cSstefano_zampini 1109d975228cSstefano_zampini /*@C 1110d975228cSstefano_zampini MatHYPRESetPreallocation - Preallocates memory for a sparse parallel matrix in HYPRE IJ format 1111d975228cSstefano_zampini 1112d975228cSstefano_zampini Collective on Mat 1113d975228cSstefano_zampini 1114d975228cSstefano_zampini Input Parameters: 1115d975228cSstefano_zampini + A - the matrix 1116d975228cSstefano_zampini . dnz - number of nonzeros per row in DIAGONAL portion of local submatrix 1117d975228cSstefano_zampini (same value is used for all local rows) 1118d975228cSstefano_zampini . dnnz - array containing the number of nonzeros in the various rows of the 1119d975228cSstefano_zampini DIAGONAL portion of the local submatrix (possibly different for each row) 1120d975228cSstefano_zampini or NULL (PETSC_NULL_INTEGER in Fortran), if d_nz is used to specify the nonzero structure. 1121d975228cSstefano_zampini The size of this array is equal to the number of local rows, i.e 'm'. 1122d975228cSstefano_zampini For matrices that will be factored, you must leave room for (and set) 1123d975228cSstefano_zampini the diagonal entry even if it is zero. 1124d975228cSstefano_zampini . onz - number of nonzeros per row in the OFF-DIAGONAL portion of local 1125d975228cSstefano_zampini submatrix (same value is used for all local rows). 1126d975228cSstefano_zampini - onnz - array containing the number of nonzeros in the various rows of the 1127d975228cSstefano_zampini OFF-DIAGONAL portion of the local submatrix (possibly different for 1128d975228cSstefano_zampini each row) or NULL (PETSC_NULL_INTEGER in Fortran), if o_nz is used to specify the nonzero 1129d975228cSstefano_zampini structure. The size of this array is equal to the number 1130d975228cSstefano_zampini of local rows, i.e 'm'. 1131d975228cSstefano_zampini 1132d975228cSstefano_zampini Notes: If the *nnz parameter is given then the *nz parameter is ignored; for sequential matrices, onz and onnz are ignored. 1133d975228cSstefano_zampini 1134d975228cSstefano_zampini Level: intermediate 1135d975228cSstefano_zampini 1136d975228cSstefano_zampini .keywords: matrix, aij, compressed row, sparse, parallel 1137d975228cSstefano_zampini 1138d975228cSstefano_zampini .seealso: MatCreate(), MatMPIAIJSetPreallocation, MATHYPRE 1139d975228cSstefano_zampini @*/ 1140d975228cSstefano_zampini #undef __FUNCT__ 1141d975228cSstefano_zampini #define __FUNCT__ "MatHYPRESetPreallocation" 1142d975228cSstefano_zampini PetscErrorCode MatHYPRESetPreallocation(Mat A, PetscInt dnz, const PetscInt dnnz[], PetscInt onz, const PetscInt onnz[]) 1143d975228cSstefano_zampini { 1144d975228cSstefano_zampini PetscErrorCode ierr; 1145d975228cSstefano_zampini 1146d975228cSstefano_zampini PetscFunctionBegin; 1147d975228cSstefano_zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 1148d975228cSstefano_zampini PetscValidType(A,1); 1149d975228cSstefano_zampini ierr = PetscTryMethod(A,"MatHYPRESetPreallocation_C",(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt[]),(A,dnz,dnnz,onz,onnz));CHKERRQ(ierr); 1150d975228cSstefano_zampini PetscFunctionReturn(0); 1151d975228cSstefano_zampini } 1152d975228cSstefano_zampini 1153225daaf8SStefano Zampini /* 1154225daaf8SStefano Zampini MatCreateFromParCSR - Creates a matrix from a hypre_ParCSRMatrix 1155225daaf8SStefano Zampini 1156225daaf8SStefano Zampini Collective 1157225daaf8SStefano Zampini 1158225daaf8SStefano Zampini Input Parameters: 1159225daaf8SStefano Zampini + vparcsr - the pointer to the hypre_ParCSRMatrix 1160bb4689ddSStefano Zampini . mtype - matrix type to be created. Currently MATAIJ, MATIS and MATHYPRE are supported. 1161225daaf8SStefano Zampini - copymode - PETSc copying options 1162225daaf8SStefano Zampini 1163225daaf8SStefano Zampini Output Parameter: 1164225daaf8SStefano Zampini . A - the matrix 1165225daaf8SStefano Zampini 1166225daaf8SStefano Zampini Level: intermediate 1167225daaf8SStefano Zampini 1168225daaf8SStefano Zampini .seealso: MatHYPRE, PetscCopyMode 1169225daaf8SStefano Zampini */ 1170978814f1SStefano Zampini #undef __FUNCT__ 1171225daaf8SStefano Zampini #define __FUNCT__ "MatCreateFromParCSR" 1172dd9c0a25Sstefano_zampini PETSC_EXTERN PetscErrorCode MatCreateFromParCSR(hypre_ParCSRMatrix *vparcsr, MatType mtype, PetscCopyMode copymode, Mat* A) 1173978814f1SStefano Zampini { 1174225daaf8SStefano Zampini Mat T; 1175978814f1SStefano Zampini Mat_HYPRE *hA; 117663c07aadSStefano Zampini hypre_ParCSRMatrix *parcsr; 1177978814f1SStefano Zampini MPI_Comm comm; 1178978814f1SStefano Zampini PetscInt rstart,rend,cstart,cend,M,N; 1179bb4689ddSStefano Zampini PetscBool isseqaij,ismpiaij,isaij,ishyp,isis; 1180978814f1SStefano Zampini PetscErrorCode ierr; 1181978814f1SStefano Zampini 1182978814f1SStefano Zampini PetscFunctionBegin; 1183978814f1SStefano Zampini parcsr = (hypre_ParCSRMatrix *)vparcsr; 1184978814f1SStefano Zampini comm = hypre_ParCSRMatrixComm(parcsr); 1185225daaf8SStefano Zampini ierr = PetscStrcmp(mtype,MATSEQAIJ,&isseqaij);CHKERRQ(ierr); 1186225daaf8SStefano Zampini ierr = PetscStrcmp(mtype,MATMPIAIJ,&ismpiaij);CHKERRQ(ierr); 1187225daaf8SStefano Zampini ierr = PetscStrcmp(mtype,MATAIJ,&isaij);CHKERRQ(ierr); 1188225daaf8SStefano Zampini ierr = PetscStrcmp(mtype,MATHYPRE,&ishyp);CHKERRQ(ierr); 11898cfe8d00SStefano Zampini ierr = PetscStrcmp(mtype,MATIS,&isis);CHKERRQ(ierr); 1190225daaf8SStefano Zampini isaij = (PetscBool)(isseqaij || ismpiaij || isaij); 1191bb4689ddSStefano Zampini if (!isaij && !ishyp && !isis) SETERRQ6(comm,PETSC_ERR_SUP,"Unsupported MatType %s! Supported types are %s, %s, %s, %s, and %s",mtype,MATAIJ,MATSEQAIJ,MATMPIAIJ,MATIS,MATHYPRE); 1192225daaf8SStefano Zampini if (ishyp && copymode == PETSC_COPY_VALUES) SETERRQ(comm,PETSC_ERR_SUP,"Unsupported copymode PETSC_COPY_VALUES"); 1193978814f1SStefano Zampini 1194978814f1SStefano Zampini /* access ParCSRMatrix */ 1195978814f1SStefano Zampini rstart = hypre_ParCSRMatrixFirstRowIndex(parcsr); 1196978814f1SStefano Zampini rend = hypre_ParCSRMatrixLastRowIndex(parcsr); 1197978814f1SStefano Zampini cstart = hypre_ParCSRMatrixFirstColDiag(parcsr); 1198978814f1SStefano Zampini cend = hypre_ParCSRMatrixLastColDiag(parcsr); 1199978814f1SStefano Zampini M = hypre_ParCSRMatrixGlobalNumRows(parcsr); 1200978814f1SStefano Zampini N = hypre_ParCSRMatrixGlobalNumCols(parcsr); 1201978814f1SStefano Zampini 1202fa92c42cSstefano_zampini /* fix for empty local rows/columns */ 1203fa92c42cSstefano_zampini if (rend < rstart) rend = rstart; 1204fa92c42cSstefano_zampini if (cend < cstart) cend = cstart; 1205fa92c42cSstefano_zampini 1206978814f1SStefano Zampini /* create PETSc matrix with MatHYPRE */ 1207225daaf8SStefano Zampini ierr = MatCreate(comm,&T);CHKERRQ(ierr); 1208225daaf8SStefano Zampini ierr = MatSetSizes(T,rend-rstart+1,cend-cstart+1,M,N);CHKERRQ(ierr); 1209225daaf8SStefano Zampini ierr = MatSetType(T,MATHYPRE);CHKERRQ(ierr); 1210225daaf8SStefano Zampini hA = (Mat_HYPRE*)(T->data); 1211978814f1SStefano Zampini 1212978814f1SStefano Zampini /* create HYPRE_IJMatrix */ 1213978814f1SStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixCreate,(hA->comm,rstart,rend-1,cstart,cend-1,&hA->ij)); 1214978814f1SStefano Zampini 1215978814f1SStefano Zampini /* set ParCSR object */ 1216978814f1SStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixSetObjectType,(hA->ij,HYPRE_PARCSR)); 1217978814f1SStefano Zampini hypre_IJMatrixObject(hA->ij) = parcsr; 12184ec6421dSstefano_zampini T->preallocated = PETSC_TRUE; 1219978814f1SStefano Zampini 1220978814f1SStefano Zampini /* set assembled flag */ 1221978814f1SStefano Zampini hypre_IJMatrixAssembleFlag(hA->ij) = 1; 1222978814f1SStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixInitialize,(hA->ij)); 1223225daaf8SStefano Zampini if (ishyp) { 12246d2a658fSstefano_zampini PetscMPIInt myid = 0; 12256d2a658fSstefano_zampini 12266d2a658fSstefano_zampini /* make sure we always have row_starts and col_starts available */ 12276d2a658fSstefano_zampini if (HYPRE_AssumedPartitionCheck()) { 12286d2a658fSstefano_zampini ierr = MPI_Comm_rank(comm,&myid);CHKERRQ(ierr); 12296d2a658fSstefano_zampini } 12306d2a658fSstefano_zampini if (!hypre_ParCSRMatrixOwnsColStarts(parcsr)) { 12316d2a658fSstefano_zampini PetscLayout map; 12326d2a658fSstefano_zampini 12336d2a658fSstefano_zampini ierr = MatGetLayouts(T,NULL,&map);CHKERRQ(ierr); 12346d2a658fSstefano_zampini ierr = PetscLayoutSetUp(map);CHKERRQ(ierr); 12356d2a658fSstefano_zampini hypre_ParCSRMatrixColStarts(parcsr) = map->range + myid; 12366d2a658fSstefano_zampini } 12376d2a658fSstefano_zampini if (!hypre_ParCSRMatrixOwnsRowStarts(parcsr)) { 12386d2a658fSstefano_zampini PetscLayout map; 12396d2a658fSstefano_zampini 12406d2a658fSstefano_zampini ierr = MatGetLayouts(T,&map,NULL);CHKERRQ(ierr); 12416d2a658fSstefano_zampini ierr = PetscLayoutSetUp(map);CHKERRQ(ierr); 12426d2a658fSstefano_zampini hypre_ParCSRMatrixRowStarts(parcsr) = map->range + myid; 12436d2a658fSstefano_zampini } 1244978814f1SStefano Zampini /* prevent from freeing the pointer */ 1245978814f1SStefano Zampini if (copymode == PETSC_USE_POINTER) hA->inner_free = PETSC_FALSE; 1246225daaf8SStefano Zampini *A = T; 1247978814f1SStefano Zampini ierr = MatAssemblyBegin(*A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1248978814f1SStefano Zampini ierr = MatAssemblyEnd(*A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr); 1249bb4689ddSStefano Zampini } else if (isaij) { 1250bb4689ddSStefano Zampini if (copymode != PETSC_OWN_POINTER) { 1251225daaf8SStefano Zampini /* prevent from freeing the pointer */ 1252225daaf8SStefano Zampini hA->inner_free = PETSC_FALSE; 1253225daaf8SStefano Zampini ierr = MatConvert_HYPRE_AIJ(T,MATAIJ,MAT_INITIAL_MATRIX,A);CHKERRQ(ierr); 1254225daaf8SStefano Zampini ierr = MatDestroy(&T);CHKERRQ(ierr); 1255225daaf8SStefano Zampini } else { /* AIJ return type with PETSC_OWN_POINTER */ 1256225daaf8SStefano Zampini ierr = MatConvert_HYPRE_AIJ(T,MATAIJ,MAT_INPLACE_MATRIX,&T);CHKERRQ(ierr); 1257225daaf8SStefano Zampini *A = T; 1258225daaf8SStefano Zampini } 1259bb4689ddSStefano Zampini } else if (isis) { 12608cfe8d00SStefano Zampini ierr = MatConvert_HYPRE_IS(T,MATIS,MAT_INITIAL_MATRIX,A);CHKERRQ(ierr); 12618cfe8d00SStefano Zampini if (copymode != PETSC_OWN_POINTER) hA->inner_free = PETSC_FALSE; 1262bb4689ddSStefano Zampini ierr = MatDestroy(&T);CHKERRQ(ierr); 1263bb4689ddSStefano Zampini } 1264978814f1SStefano Zampini PetscFunctionReturn(0); 1265978814f1SStefano Zampini } 1266978814f1SStefano Zampini 126763c07aadSStefano Zampini #undef __FUNCT__ 1268dd9c0a25Sstefano_zampini #define __FUNCT__ "MatHYPREGetParCSR_HYPRE" 1269dd9c0a25Sstefano_zampini PetscErrorCode MatHYPREGetParCSR_HYPRE(Mat A, hypre_ParCSRMatrix **parcsr) 1270dd9c0a25Sstefano_zampini { 1271dd9c0a25Sstefano_zampini Mat_HYPRE* hA = (Mat_HYPRE*)A->data; 1272dd9c0a25Sstefano_zampini HYPRE_Int type; 1273dd9c0a25Sstefano_zampini PetscErrorCode ierr; 1274dd9c0a25Sstefano_zampini 1275dd9c0a25Sstefano_zampini PetscFunctionBegin; 1276dd9c0a25Sstefano_zampini if (!hA->ij) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"HYPRE_IJMatrix not present"); 1277dd9c0a25Sstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(hA->ij,&type)); 1278dd9c0a25Sstefano_zampini if (type != HYPRE_PARCSR) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"HYPRE_IJMatrix is not of type HYPRE_PARCSR"); 1279dd9c0a25Sstefano_zampini PetscStackCallStandard(HYPRE_IJMatrixGetObject,(hA->ij,(void**)parcsr)); 1280dd9c0a25Sstefano_zampini PetscFunctionReturn(0); 1281dd9c0a25Sstefano_zampini } 1282dd9c0a25Sstefano_zampini 1283dd9c0a25Sstefano_zampini /* 1284dd9c0a25Sstefano_zampini MatHYPREGetParCSR - Gets the pointer to the ParCSR matrix 1285dd9c0a25Sstefano_zampini 1286dd9c0a25Sstefano_zampini Not collective 1287dd9c0a25Sstefano_zampini 1288dd9c0a25Sstefano_zampini Input Parameters: 1289dd9c0a25Sstefano_zampini + A - the MATHYPRE object 1290dd9c0a25Sstefano_zampini 1291dd9c0a25Sstefano_zampini Output Parameter: 1292dd9c0a25Sstefano_zampini . parcsr - the pointer to the hypre_ParCSRMatrix 1293dd9c0a25Sstefano_zampini 1294dd9c0a25Sstefano_zampini Level: intermediate 1295dd9c0a25Sstefano_zampini 1296dd9c0a25Sstefano_zampini .seealso: MatHYPRE, PetscCopyMode 1297dd9c0a25Sstefano_zampini */ 1298dd9c0a25Sstefano_zampini #undef __FUNCT__ 1299dd9c0a25Sstefano_zampini #define __FUNCT__ "MatHYPREGetParCSR" 1300dd9c0a25Sstefano_zampini PetscErrorCode MatHYPREGetParCSR(Mat A, hypre_ParCSRMatrix **parcsr) 1301dd9c0a25Sstefano_zampini { 1302dd9c0a25Sstefano_zampini PetscErrorCode ierr; 1303dd9c0a25Sstefano_zampini 1304dd9c0a25Sstefano_zampini PetscFunctionBegin; 1305dd9c0a25Sstefano_zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 1306dd9c0a25Sstefano_zampini PetscValidType(A,1); 1307dd9c0a25Sstefano_zampini ierr = PetscUseMethod(A,"MatHYPREGetParCSR_C",(Mat,hypre_ParCSRMatrix**),(A,parcsr));CHKERRQ(ierr); 1308dd9c0a25Sstefano_zampini PetscFunctionReturn(0); 1309dd9c0a25Sstefano_zampini } 1310dd9c0a25Sstefano_zampini 1311dd9c0a25Sstefano_zampini #undef __FUNCT__ 131263c07aadSStefano Zampini #define __FUNCT__ "MatCreate_HYPRE" 131363c07aadSStefano Zampini PETSC_EXTERN PetscErrorCode MatCreate_HYPRE(Mat B) 131463c07aadSStefano Zampini { 131563c07aadSStefano Zampini Mat_HYPRE *hB; 131663c07aadSStefano Zampini PetscErrorCode ierr; 131763c07aadSStefano Zampini 131863c07aadSStefano Zampini PetscFunctionBegin; 131963c07aadSStefano Zampini ierr = PetscNewLog(B,&hB);CHKERRQ(ierr); 1320978814f1SStefano Zampini hB->inner_free = PETSC_TRUE; 1321978814f1SStefano Zampini 132263c07aadSStefano Zampini B->data = (void*)hB; 132363c07aadSStefano Zampini B->rmap->bs = 1; 132463c07aadSStefano Zampini B->assembled = PETSC_FALSE; 132563c07aadSStefano Zampini 132663c07aadSStefano Zampini B->ops->mult = MatMult_HYPRE; 132763c07aadSStefano Zampini B->ops->multtranspose = MatMultTranspose_HYPRE; 132863c07aadSStefano Zampini B->ops->setup = MatSetUp_HYPRE; 132963c07aadSStefano Zampini B->ops->destroy = MatDestroy_HYPRE; 133063c07aadSStefano Zampini B->ops->assemblyend = MatAssemblyEnd_HYPRE; 1331cd8bc7baSStefano Zampini B->ops->ptap = MatPtAP_HYPRE_HYPRE; 1332d975228cSstefano_zampini B->ops->setvalues = MatSetValues_HYPRE; 133363c07aadSStefano Zampini 133463c07aadSStefano Zampini ierr = MPI_Comm_dup(PetscObjectComm((PetscObject)B),&hB->comm);CHKERRQ(ierr); 133563c07aadSStefano Zampini ierr = PetscObjectChangeTypeName((PetscObject)B,MATHYPRE);CHKERRQ(ierr); 133663c07aadSStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_hypre_aij_C",MatConvert_HYPRE_AIJ);CHKERRQ(ierr); 13372df22349SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_hypre_is_C",MatConvert_HYPRE_IS);CHKERRQ(ierr); 1338c1a070e6SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatPtAP_seqaij_hypre_C",MatPtAP_AIJ_HYPRE);CHKERRQ(ierr); 1339c1a070e6SStefano Zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatPtAP_mpiaij_hypre_C",MatPtAP_AIJ_HYPRE);CHKERRQ(ierr); 1340d975228cSstefano_zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatHYPRESetPreallocation_C",MatHYPRESetPreallocation_HYPRE);CHKERRQ(ierr); 1341dd9c0a25Sstefano_zampini ierr = PetscObjectComposeFunction((PetscObject)B,"MatHYPREGetParCSR_C",MatHYPREGetParCSR_HYPRE);CHKERRQ(ierr); 134263c07aadSStefano Zampini PetscFunctionReturn(0); 134363c07aadSStefano Zampini } 134463c07aadSStefano Zampini 1345225daaf8SStefano Zampini #undef __FUNCT__ 1346225daaf8SStefano Zampini #define __FUNCT__ "hypre_array_destroy" 1347225daaf8SStefano Zampini static PetscErrorCode hypre_array_destroy(void *ptr) 1348225daaf8SStefano Zampini { 1349225daaf8SStefano Zampini PetscFunctionBegin; 1350225daaf8SStefano Zampini hypre_TFree(ptr); 1351225daaf8SStefano Zampini PetscFunctionReturn(0); 1352225daaf8SStefano Zampini } 1353225daaf8SStefano Zampini 135463c07aadSStefano Zampini #if 0 135563c07aadSStefano Zampini /* 135663c07aadSStefano Zampini Does NOT copy the data over, instead uses DIRECTLY the pointers from the PETSc MPIAIJ format 135763c07aadSStefano Zampini 135863c07aadSStefano Zampini This is UNFINISHED and does NOT work! The problem is that hypre puts the diagonal entry first 135963c07aadSStefano Zampini which will corrupt the PETSc data structure if we did this. Need a work around to this problem. 136063c07aadSStefano Zampini */ 136163c07aadSStefano Zampini #include <_hypre_IJ_mv.h> 136263c07aadSStefano Zampini #include <HYPRE_IJ_mv.h> 136363c07aadSStefano Zampini 136463c07aadSStefano Zampini #undef __FUNCT__ 136563c07aadSStefano Zampini #define __FUNCT__ "MatHYPRE_IJMatrixLink" 136663c07aadSStefano Zampini PetscErrorCode MatHYPRE_IJMatrixLink(Mat A, HYPRE_IJMatrix *ij) 136763c07aadSStefano Zampini { 136863c07aadSStefano Zampini PetscErrorCode ierr; 136963c07aadSStefano Zampini PetscInt rstart,rend,cstart,cend; 137063c07aadSStefano Zampini PetscBool flg; 137163c07aadSStefano Zampini hypre_AuxParCSRMatrix *aux_matrix; 137263c07aadSStefano Zampini 137363c07aadSStefano Zampini PetscFunctionBegin; 137463c07aadSStefano Zampini PetscValidHeaderSpecific(A,MAT_CLASSID,1); 137563c07aadSStefano Zampini PetscValidType(A,1); 137663c07aadSStefano Zampini PetscValidPointer(ij,2); 137763c07aadSStefano Zampini ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&flg);CHKERRQ(ierr); 137863c07aadSStefano Zampini if (!flg) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Can only use with PETSc MPIAIJ matrices"); 137963c07aadSStefano Zampini ierr = MatSetUp(A);CHKERRQ(ierr); 138063c07aadSStefano Zampini 138163c07aadSStefano Zampini ierr = PetscLogEventBegin(MAT_Convert,A,0,0,0);CHKERRQ(ierr); 138263c07aadSStefano Zampini rstart = A->rmap->rstart; 138363c07aadSStefano Zampini rend = A->rmap->rend; 138463c07aadSStefano Zampini cstart = A->cmap->rstart; 138563c07aadSStefano Zampini cend = A->cmap->rend; 138663c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixCreate,(PetscObjectComm((PetscObject)A),rstart,rend-1,cstart,cend-1,ij)); 138763c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixSetObjectType,(*ij,HYPRE_PARCSR)); 138863c07aadSStefano Zampini 138963c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixInitialize,(*ij)); 139063c07aadSStefano Zampini PetscStackCall("hypre_IJMatrixTranslator",aux_matrix = (hypre_AuxParCSRMatrix*)hypre_IJMatrixTranslator(*ij)); 139163c07aadSStefano Zampini 139263c07aadSStefano Zampini hypre_AuxParCSRMatrixNeedAux(aux_matrix) = 0; 139363c07aadSStefano Zampini 139463c07aadSStefano Zampini /* this is the Hack part where we monkey directly with the hypre datastructures */ 139563c07aadSStefano Zampini 139663c07aadSStefano Zampini PetscStackCallStandard(HYPRE_IJMatrixAssemble,(*ij)); 139763c07aadSStefano Zampini ierr = PetscLogEventEnd(MAT_Convert,A,0,0,0);CHKERRQ(ierr); 139863c07aadSStefano Zampini PetscFunctionReturn(0); 139963c07aadSStefano Zampini } 140063c07aadSStefano Zampini #endif 1401