xref: /petsc/src/mat/impls/hypre/mhypre.c (revision 6f231fbd2374cbe6164d628914189d7ad61e36c4)
1 
2 /*
3     Creates hypre ijmatrix from PETSc matrix
4 */
5 
6 /*MC
7    MATHYPRE - MATHYPRE = "hypre" - A matrix type to be used for sequential and parallel sparse matrices
8           based on the hypre IJ interface.
9 
10    Level: intermediate
11 
12 .seealso: MatCreate()
13 M*/
14 
15 #include <petscmathypre.h>
16 #include <petsc/private/matimpl.h>
17 #include <../src/mat/impls/hypre/mhypre.h>
18 #include <../src/mat/impls/aij/mpi/mpiaij.h>
19 #include <../src/vec/vec/impls/hypre/vhyp.h>
20 #include <HYPRE.h>
21 #include <HYPRE_utilities.h>
22 #include <_hypre_parcsr_ls.h>
23 
24 static PetscErrorCode MatHYPRE_CreateFromMat(Mat,Mat_HYPRE*);
25 static PetscErrorCode MatHYPRE_IJMatrixPreallocate(Mat,Mat,HYPRE_IJMatrix);
26 static PetscErrorCode MatHYPRE_IJMatrixFastCopy_MPIAIJ(Mat,HYPRE_IJMatrix);
27 static PetscErrorCode MatHYPRE_IJMatrixFastCopy_SeqAIJ(Mat,HYPRE_IJMatrix);
28 static PetscErrorCode MatHYPRE_MultKernel_Private(Mat,Vec,Vec,PetscBool);
29 static PetscErrorCode hypre_array_destroy(void*);
30 
31 #undef __FUNCT__
32 #define __FUNCT__ "MatHYPRE_IJMatrixPreallocate"
33 static PetscErrorCode MatHYPRE_IJMatrixPreallocate(Mat A_d, Mat A_o, HYPRE_IJMatrix ij)
34 {
35   PetscErrorCode ierr;
36   PetscInt       i,n_d,n_o;
37   const PetscInt *ia_d,*ia_o;
38   PetscBool      done_d=PETSC_FALSE,done_o=PETSC_FALSE;
39   PetscInt       *nnz_d=NULL,*nnz_o=NULL;
40 
41   PetscFunctionBegin;
42   if (A_d) { /* determine number of nonzero entries in local diagonal part */
43     ierr = MatGetRowIJ(A_d,0,PETSC_FALSE,PETSC_FALSE,&n_d,&ia_d,NULL,&done_d);CHKERRQ(ierr);
44     if (done_d) {
45       ierr = PetscMalloc1(n_d,&nnz_d);CHKERRQ(ierr);
46       for (i=0; i<n_d; i++) {
47         nnz_d[i] = ia_d[i+1] - ia_d[i];
48       }
49     }
50     ierr = MatRestoreRowIJ(A_d,0,PETSC_FALSE,PETSC_FALSE,NULL,&ia_d,NULL,&done_d);CHKERRQ(ierr);
51   }
52   if (A_o) { /* determine number of nonzero entries in local off-diagonal part */
53     ierr = MatGetRowIJ(A_o,0,PETSC_FALSE,PETSC_FALSE,&n_o,&ia_o,NULL,&done_o);CHKERRQ(ierr);
54     if (done_o) {
55       ierr = PetscMalloc1(n_o,&nnz_o);CHKERRQ(ierr);
56       for (i=0; i<n_o; i++) {
57         nnz_o[i] = ia_o[i+1] - ia_o[i];
58       }
59     }
60     ierr = MatRestoreRowIJ(A_o,0,PETSC_FALSE,PETSC_FALSE,&n_o,&ia_o,NULL,&done_o);CHKERRQ(ierr);
61   }
62   if (done_d) {    /* set number of nonzeros in HYPRE IJ matrix */
63     if (!done_o) { /* only diagonal part */
64       ierr = PetscMalloc1(n_d,&nnz_o);CHKERRQ(ierr);
65       for (i=0; i<n_d; i++) {
66         nnz_o[i] = 0;
67       }
68     }
69     PetscStackCallStandard(HYPRE_IJMatrixSetDiagOffdSizes,(ij,(HYPRE_Int *)nnz_d,(HYPRE_Int *)nnz_o));
70     ierr = PetscFree(nnz_d);CHKERRQ(ierr);
71     ierr = PetscFree(nnz_o);CHKERRQ(ierr);
72   }
73   PetscFunctionReturn(0);
74 }
75 
76 #undef __FUNCT__
77 #define __FUNCT__ "MatHYPRE_CreateFromMat"
78 static PetscErrorCode MatHYPRE_CreateFromMat(Mat A, Mat_HYPRE *hA)
79 {
80   PetscErrorCode ierr;
81   PetscInt       rstart,rend,cstart,cend;
82 
83   PetscFunctionBegin;
84   ierr   = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr);
85   ierr   = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr);
86   rstart = A->rmap->rstart;
87   rend   = A->rmap->rend;
88   cstart = A->cmap->rstart;
89   cend   = A->cmap->rend;
90   PetscStackCallStandard(HYPRE_IJMatrixCreate,(hA->comm,rstart,rend-1,cstart,cend-1,&hA->ij));
91   PetscStackCallStandard(HYPRE_IJMatrixSetObjectType,(hA->ij,HYPRE_PARCSR));
92   {
93     PetscBool      same;
94     Mat            A_d,A_o;
95     const PetscInt *colmap;
96     ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&same);CHKERRQ(ierr);
97     if (same) {
98       ierr = MatMPIAIJGetSeqAIJ(A,&A_d,&A_o,&colmap);CHKERRQ(ierr);
99       ierr = MatHYPRE_IJMatrixPreallocate(A_d,A_o,hA->ij);CHKERRQ(ierr);
100       PetscFunctionReturn(0);
101     }
102     ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIBAIJ,&same);CHKERRQ(ierr);
103     if (same) {
104       ierr = MatMPIBAIJGetSeqBAIJ(A,&A_d,&A_o,&colmap);CHKERRQ(ierr);
105       ierr = MatHYPRE_IJMatrixPreallocate(A_d,A_o,hA->ij);CHKERRQ(ierr);
106       PetscFunctionReturn(0);
107     }
108     ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&same);CHKERRQ(ierr);
109     if (same) {
110       ierr = MatHYPRE_IJMatrixPreallocate(A,NULL,hA->ij);CHKERRQ(ierr);
111       PetscFunctionReturn(0);
112     }
113     ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQBAIJ,&same);CHKERRQ(ierr);
114     if (same) {
115       ierr = MatHYPRE_IJMatrixPreallocate(A,NULL,hA->ij);CHKERRQ(ierr);
116       PetscFunctionReturn(0);
117     }
118   }
119   PetscFunctionReturn(0);
120 }
121 
122 #undef __FUNCT__
123 #define __FUNCT__ "MatHYPRE_IJMatrixCopy"
124 static PetscErrorCode MatHYPRE_IJMatrixCopy(Mat A, HYPRE_IJMatrix ij)
125 {
126   PetscErrorCode    ierr;
127   PetscInt          i,rstart,rend,ncols,nr,nc;
128   const PetscScalar *values;
129   const PetscInt    *cols;
130   PetscBool         flg;
131 
132   PetscFunctionBegin;
133   ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&flg);CHKERRQ(ierr);
134   ierr = MatGetSize(A,&nr,&nc);CHKERRQ(ierr);
135   if (flg && nr == nc) {
136     ierr = MatHYPRE_IJMatrixFastCopy_MPIAIJ(A,ij);CHKERRQ(ierr);
137     PetscFunctionReturn(0);
138   }
139   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&flg);CHKERRQ(ierr);
140   if (flg) {
141     ierr = MatHYPRE_IJMatrixFastCopy_SeqAIJ(A,ij);CHKERRQ(ierr);
142     PetscFunctionReturn(0);
143   }
144 
145   PetscStackCallStandard(HYPRE_IJMatrixInitialize,(ij));
146   ierr = MatGetOwnershipRange(A,&rstart,&rend);CHKERRQ(ierr);
147   for (i=rstart; i<rend; i++) {
148     ierr = MatGetRow(A,i,&ncols,&cols,&values);CHKERRQ(ierr);
149     PetscStackCallStandard(HYPRE_IJMatrixSetValues,(ij,1,(HYPRE_Int *)&ncols,(HYPRE_Int *)&i,(HYPRE_Int *)cols,values));
150     ierr = MatRestoreRow(A,i,&ncols,&cols,&values);CHKERRQ(ierr);
151   }
152   PetscFunctionReturn(0);
153 }
154 
155 #undef __FUNCT__
156 #define __FUNCT__ "MatHYPRE_IJMatrixFastCopy_SeqAIJ"
157 static PetscErrorCode MatHYPRE_IJMatrixFastCopy_SeqAIJ(Mat A, HYPRE_IJMatrix ij)
158 {
159   PetscErrorCode        ierr;
160   Mat_SeqAIJ            *pdiag = (Mat_SeqAIJ*)A->data;
161   HYPRE_Int             type;
162   hypre_ParCSRMatrix    *par_matrix;
163   hypre_AuxParCSRMatrix *aux_matrix;
164   hypre_CSRMatrix       *hdiag;
165 
166   PetscFunctionBegin;
167   PetscStackCallStandard(HYPRE_IJMatrixInitialize,(ij));
168   PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(ij,&type));
169   if (type != HYPRE_PARCSR) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported");
170   PetscStackCallStandard(HYPRE_IJMatrixGetObject,(ij,(void**)&par_matrix));
171   hdiag = hypre_ParCSRMatrixDiag(par_matrix);
172   /*
173        this is the Hack part where we monkey directly with the hypre datastructures
174   */
175   ierr = PetscMemcpy(hdiag->i,pdiag->i,(A->rmap->n + 1)*sizeof(PetscInt));
176   ierr = PetscMemcpy(hdiag->j,pdiag->j,pdiag->nz*sizeof(PetscInt));
177   ierr = PetscMemcpy(hdiag->data,pdiag->a,pdiag->nz*sizeof(PetscScalar));
178 
179   aux_matrix = (hypre_AuxParCSRMatrix*)hypre_IJMatrixTranslator(ij);
180   hypre_AuxParCSRMatrixNeedAux(aux_matrix) = 0;
181   PetscFunctionReturn(0);
182 }
183 
184 #undef __FUNCT__
185 #define __FUNCT__ "MatHYPRE_IJMatrixFastCopy_MPIAIJ"
186 static PetscErrorCode MatHYPRE_IJMatrixFastCopy_MPIAIJ(Mat A, HYPRE_IJMatrix ij)
187 {
188   PetscErrorCode        ierr;
189   Mat_MPIAIJ            *pA = (Mat_MPIAIJ*)A->data;
190   Mat_SeqAIJ            *pdiag,*poffd;
191   PetscInt              i,*garray = pA->garray,*jj,cstart,*pjj;
192   HYPRE_Int             type;
193   hypre_ParCSRMatrix    *par_matrix;
194   hypre_AuxParCSRMatrix *aux_matrix;
195   hypre_CSRMatrix       *hdiag,*hoffd;
196 
197   PetscFunctionBegin;
198   pdiag = (Mat_SeqAIJ*) pA->A->data;
199   poffd = (Mat_SeqAIJ*) pA->B->data;
200   /* cstart is only valid for square MPIAIJ layed out in the usual way */
201   ierr = MatGetOwnershipRange(A,&cstart,NULL);CHKERRQ(ierr);
202 
203   PetscStackCallStandard(HYPRE_IJMatrixInitialize,(ij));
204   PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(ij,&type));
205   if (type != HYPRE_PARCSR) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported");
206   PetscStackCallStandard(HYPRE_IJMatrixGetObject,(ij,(void**)&par_matrix));
207   hdiag = hypre_ParCSRMatrixDiag(par_matrix);
208   hoffd = hypre_ParCSRMatrixOffd(par_matrix);
209 
210   /*
211        this is the Hack part where we monkey directly with the hypre datastructures
212   */
213   ierr = PetscMemcpy(hdiag->i,pdiag->i,(pA->A->rmap->n + 1)*sizeof(PetscInt));
214   /* need to shift the diag column indices (hdiag->j) back to global numbering since hypre is expecting this */
215   jj  = (PetscInt*)hdiag->j;
216   pjj = (PetscInt*)pdiag->j;
217   for (i=0; i<pdiag->nz; i++) jj[i] = cstart + pjj[i];
218   ierr = PetscMemcpy(hdiag->data,pdiag->a,pdiag->nz*sizeof(PetscScalar));
219   ierr = PetscMemcpy(hoffd->i,poffd->i,(pA->A->rmap->n + 1)*sizeof(PetscInt));
220   /* need to move the offd column indices (hoffd->j) back to global numbering since hypre is expecting this
221      If we hacked a hypre a bit more we might be able to avoid this step */
222   jj  = (PetscInt*) hoffd->j;
223   pjj = (PetscInt*) poffd->j;
224   for (i=0; i<poffd->nz; i++) jj[i] = garray[pjj[i]];
225   ierr = PetscMemcpy(hoffd->data,poffd->a,poffd->nz*sizeof(PetscScalar));
226 
227   aux_matrix = (hypre_AuxParCSRMatrix*)hypre_IJMatrixTranslator(ij);
228   hypre_AuxParCSRMatrixNeedAux(aux_matrix) = 0;
229   PetscFunctionReturn(0);
230 }
231 
232 #undef __FUNCT__
233 #define __FUNCT__ "MatConvert_HYPRE_IS"
234 static PetscErrorCode MatConvert_HYPRE_IS(Mat A, MatType mtype, MatReuse reuse, Mat* B)
235 {
236   Mat_HYPRE*             mhA = (Mat_HYPRE*)(A->data);
237   Mat                    lA;
238   ISLocalToGlobalMapping rl2g,cl2g;
239   IS                     is;
240   hypre_ParCSRMatrix     *hA;
241   hypre_CSRMatrix        *hdiag,*hoffd;
242   MPI_Comm               comm;
243   PetscScalar            *hdd,*hod,*aa,*data;
244   HYPRE_Int              *col_map_offd,*hdi,*hdj,*hoi,*hoj;
245   PetscInt               *ii,*jj,*iptr,*jptr;
246   PetscInt               cum,dr,dc,oc,str,stc,nnz,i,jd,jo,M,N;
247   HYPRE_Int              type;
248   PetscErrorCode         ierr;
249 
250   PetscFunctionBegin;
251   comm = PetscObjectComm((PetscObject)A);
252   PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(mhA->ij,&type));
253   if (type != HYPRE_PARCSR) SETERRQ(comm,PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported");
254   PetscStackCallStandard(HYPRE_IJMatrixGetObject,(mhA->ij,(void**)&hA));
255   M     = hypre_ParCSRMatrixGlobalNumRows(hA);
256   N     = hypre_ParCSRMatrixGlobalNumCols(hA);
257   str   = hypre_ParCSRMatrixFirstRowIndex(hA);
258   stc   = hypre_ParCSRMatrixFirstColDiag(hA);
259   hdiag = hypre_ParCSRMatrixDiag(hA);
260   hoffd = hypre_ParCSRMatrixOffd(hA);
261   dr    = hypre_CSRMatrixNumRows(hdiag);
262   dc    = hypre_CSRMatrixNumCols(hdiag);
263   nnz   = hypre_CSRMatrixNumNonzeros(hdiag);
264   hdi   = hypre_CSRMatrixI(hdiag);
265   hdj   = hypre_CSRMatrixJ(hdiag);
266   hdd   = hypre_CSRMatrixData(hdiag);
267   oc    = hypre_CSRMatrixNumCols(hoffd);
268   nnz  += hypre_CSRMatrixNumNonzeros(hoffd);
269   hoi   = hypre_CSRMatrixI(hoffd);
270   hoj   = hypre_CSRMatrixJ(hoffd);
271   hod   = hypre_CSRMatrixData(hoffd);
272   if (reuse != MAT_REUSE_MATRIX) {
273     PetscInt *aux;
274 
275     /* generate l2g maps for rows and cols */
276     ierr = ISCreateStride(comm,dr,str,1,&is);CHKERRQ(ierr);
277     ierr = ISLocalToGlobalMappingCreateIS(is,&rl2g);CHKERRQ(ierr);
278     ierr = ISDestroy(&is);CHKERRQ(ierr);
279     col_map_offd = hypre_ParCSRMatrixColMapOffd(hA);
280     ierr = PetscMalloc1(dc+oc,&aux);CHKERRQ(ierr);
281     for (i=0; i<dc; i++) aux[i] = i+stc;
282     for (i=0; i<oc; i++) aux[i+dc] = col_map_offd[i];
283     ierr = ISCreateGeneral(comm,dc+oc,aux,PETSC_OWN_POINTER,&is);CHKERRQ(ierr);
284     ierr = ISLocalToGlobalMappingCreateIS(is,&cl2g);CHKERRQ(ierr);
285     ierr = ISDestroy(&is);CHKERRQ(ierr);
286     /* create MATIS object */
287     ierr = MatCreate(comm,B);CHKERRQ(ierr);
288     ierr = MatSetSizes(*B,dr,dc,M,N);CHKERRQ(ierr);
289     ierr = MatSetType(*B,MATIS);CHKERRQ(ierr);
290     ierr = MatSetLocalToGlobalMapping(*B,rl2g,cl2g);CHKERRQ(ierr);
291     ierr = ISLocalToGlobalMappingDestroy(&rl2g);CHKERRQ(ierr);
292     ierr = ISLocalToGlobalMappingDestroy(&cl2g);CHKERRQ(ierr);
293 
294     /* allocate CSR for local matrix */
295     ierr = PetscMalloc1(dr+1,&iptr);CHKERRQ(ierr);
296     ierr = PetscMalloc1(nnz,&jptr);CHKERRQ(ierr);
297     ierr = PetscMalloc1(nnz,&data);CHKERRQ(ierr);
298   } else {
299     PetscInt  nr;
300     PetscBool done;
301     ierr = MatISGetLocalMat(*B,&lA);CHKERRQ(ierr);
302     ierr = MatGetRowIJ(lA,0,PETSC_FALSE,PETSC_FALSE,&nr,(const PetscInt**)&iptr,(const PetscInt**)&jptr,&done);CHKERRQ(ierr);
303     if (nr != dr) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of rows in local mat! %D != %D",nr,dr);
304     if (iptr[nr] < nnz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of nonzeros in local mat! reuse %D requested %D",iptr[nr],nnz);
305     ierr = MatSeqAIJGetArray(lA,&data);CHKERRQ(ierr);
306   }
307   /* merge local matrices */
308   ii   = iptr;
309   jj   = jptr;
310   aa   = data;
311   *ii  = *(hdi++) + *(hoi++);
312   for (jd=0,jo=0,cum=0; *ii<nnz; cum++) {
313     PetscScalar *aold = aa;
314     PetscInt    *jold = jj,nc = jd+jo;
315     for (; jd<*hdi; jd++) { *jj++ = *hdj++;      *aa++ = *hdd++; }
316     for (; jo<*hoi; jo++) { *jj++ = *hoj++ + dc; *aa++ = *hod++; }
317     *(++ii) = *(hdi++) + *(hoi++);
318     ierr = PetscSortIntWithScalarArray(jd+jo-nc,jold,aold);CHKERRQ(ierr);
319   }
320   for (; cum<dr; cum++) *(++ii) = nnz;
321   if (reuse != MAT_REUSE_MATRIX) {
322     Mat_SeqAIJ* a;
323 
324     ierr = MatCreateSeqAIJWithArrays(PETSC_COMM_SELF,dr,dc+oc,iptr,jptr,data,&lA);CHKERRQ(ierr);
325     ierr = MatISSetLocalMat(*B,lA);CHKERRQ(ierr);
326     /* hack SeqAIJ */
327     a          = (Mat_SeqAIJ*)(lA->data);
328     a->free_a  = PETSC_TRUE;
329     a->free_ij = PETSC_TRUE;
330     ierr = MatDestroy(&lA);CHKERRQ(ierr);
331   }
332   ierr = MatAssemblyBegin(*B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
333   ierr = MatAssemblyEnd(*B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
334   if (reuse == MAT_INPLACE_MATRIX) {
335     ierr = MatHeaderReplace(A,B);CHKERRQ(ierr);
336   }
337   PetscFunctionReturn(0);
338 }
339 
340 #undef __FUNCT__
341 #define __FUNCT__ "MatConvert_AIJ_HYPRE"
342 PETSC_INTERN PetscErrorCode MatConvert_AIJ_HYPRE(Mat A, MatType type, MatReuse reuse, Mat *B)
343 {
344   Mat_HYPRE      *hB;
345   MPI_Comm       comm = PetscObjectComm((PetscObject)A);
346   PetscErrorCode ierr;
347 
348   PetscFunctionBegin;
349   if (reuse == MAT_INPLACE_MATRIX) SETERRQ(comm,PETSC_ERR_SUP,"Unsupported MAT_INPLACE_MATRIX");
350   if (reuse == MAT_REUSE_MATRIX) {
351     /* always destroy the old matrix and create a new memory;
352        hope this does not churn the memory too much. The problem
353        is I do not know if it is possible to put the matrix back to
354        its initial state so that we can directly copy the values
355        the second time through. */
356     hB = (Mat_HYPRE*)((*B)->data);
357     PetscStackCallStandard(HYPRE_IJMatrixDestroy,(hB->ij));
358   } else {
359     ierr = MatCreate(comm,B);CHKERRQ(ierr);
360     ierr = MatSetType(*B,MATHYPRE);CHKERRQ(ierr);
361     ierr = MatSetSizes(*B,A->rmap->n,A->cmap->n,A->rmap->N,A->cmap->N);CHKERRQ(ierr);
362     hB   = (Mat_HYPRE*)((*B)->data);
363   }
364   ierr = MatHYPRE_CreateFromMat(A,hB);CHKERRQ(ierr);
365   ierr = MatHYPRE_IJMatrixCopy(A,hB->ij);CHKERRQ(ierr);
366   (*B)->preallocated = PETSC_TRUE;
367   ierr = MatAssemblyBegin(*B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
368   ierr = MatAssemblyEnd(*B,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
369   PetscFunctionReturn(0);
370 }
371 
372 #undef __FUNCT__
373 #define __FUNCT__ "MatConvert_HYPRE_AIJ"
374 static PetscErrorCode MatConvert_HYPRE_AIJ(Mat A, MatType mtype, MatReuse reuse, Mat *B)
375 {
376   Mat_HYPRE          *hA = (Mat_HYPRE*)A->data;
377   hypre_ParCSRMatrix *parcsr;
378   hypre_CSRMatrix    *hdiag,*hoffd;
379   MPI_Comm           comm;
380   PetscScalar        *da,*oa,*aptr;
381   PetscInt           *dii,*djj,*oii,*ojj,*iptr;
382   PetscInt           i,dnnz,onnz,m,n;
383   HYPRE_Int          type;
384   PetscMPIInt        size;
385   PetscErrorCode     ierr;
386 
387   PetscFunctionBegin;
388   comm = PetscObjectComm((PetscObject)A);
389   PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(hA->ij,&type));
390   if (type != HYPRE_PARCSR) SETERRQ(comm,PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported");
391   if (reuse == MAT_REUSE_MATRIX) {
392     PetscBool ismpiaij,isseqaij;
393     ierr = PetscObjectTypeCompare((PetscObject)*B,MATMPIAIJ,&ismpiaij);CHKERRQ(ierr);
394     ierr = PetscObjectTypeCompare((PetscObject)*B,MATSEQAIJ,&isseqaij);CHKERRQ(ierr);
395     if (!ismpiaij && !isseqaij) SETERRQ(comm,PETSC_ERR_SUP,"Only MATMPIAIJ or MATSEQAIJ are supported");
396   }
397   ierr = MPI_Comm_size(comm,&size);CHKERRQ(ierr);
398 
399   PetscStackCallStandard(HYPRE_IJMatrixGetObject,(hA->ij,(void**)&parcsr));
400   hdiag = hypre_ParCSRMatrixDiag(parcsr);
401   hoffd = hypre_ParCSRMatrixOffd(parcsr);
402   m     = hypre_CSRMatrixNumRows(hdiag);
403   n     = hypre_CSRMatrixNumCols(hdiag);
404   dnnz  = hypre_CSRMatrixNumNonzeros(hdiag);
405   onnz  = hypre_CSRMatrixNumNonzeros(hoffd);
406   if (reuse == MAT_INITIAL_MATRIX) {
407     ierr = PetscMalloc1(m+1,&dii);CHKERRQ(ierr);
408     ierr = PetscMalloc1(dnnz,&djj);CHKERRQ(ierr);
409     ierr = PetscMalloc1(dnnz,&da);CHKERRQ(ierr);
410   } else if (reuse == MAT_REUSE_MATRIX) {
411     PetscInt  nr;
412     PetscBool done;
413     if (size > 1) {
414       Mat_MPIAIJ *b = (Mat_MPIAIJ*)((*B)->data);
415 
416       ierr = MatGetRowIJ(b->A,0,PETSC_FALSE,PETSC_FALSE,&nr,(const PetscInt**)&dii,(const PetscInt**)&djj,&done);CHKERRQ(ierr);
417       if (nr != m) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of local rows in diag part! %D != %D",nr,m);
418       if (dii[nr] < dnnz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of nonzeros in diag part! reuse %D hypre %D",dii[nr],dnnz);
419       ierr = MatSeqAIJGetArray(b->A,&da);CHKERRQ(ierr);
420     } else {
421       ierr = MatGetRowIJ(*B,0,PETSC_FALSE,PETSC_FALSE,&nr,(const PetscInt**)&dii,(const PetscInt**)&djj,&done);CHKERRQ(ierr);
422       if (nr != m) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of local rows! %D != %D",nr,m);
423       if (dii[nr] < dnnz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of nonzeros! reuse %D hypre %D",dii[nr],dnnz);
424       ierr = MatSeqAIJGetArray(*B,&da);CHKERRQ(ierr);
425     }
426   } else { /* MAT_INPLACE_MATRIX */
427     dii = (PetscInt*)hypre_CSRMatrixI(hdiag);
428     djj = (PetscInt*)hypre_CSRMatrixJ(hdiag);
429     da  = hypre_CSRMatrixData(hdiag);
430   }
431   ierr = PetscMemcpy(dii,hypre_CSRMatrixI(hdiag),(m+1)*sizeof(PetscInt));CHKERRQ(ierr);
432   ierr = PetscMemcpy(djj,hypre_CSRMatrixJ(hdiag),dnnz*sizeof(PetscInt));CHKERRQ(ierr);
433   ierr = PetscMemcpy(da,hypre_CSRMatrixData(hdiag),dnnz*sizeof(PetscScalar));CHKERRQ(ierr);
434   iptr = djj;
435   aptr = da;
436   for (i=0; i<m; i++) {
437     PetscInt nc = dii[i+1]-dii[i];
438     ierr = PetscSortIntWithScalarArray(nc,iptr,aptr);CHKERRQ(ierr);
439     iptr += nc;
440     aptr += nc;
441   }
442   if (size > 1) {
443     HYPRE_Int *offdj,*coffd;
444 
445     if (reuse == MAT_INITIAL_MATRIX) {
446       ierr = PetscMalloc1(m+1,&oii);CHKERRQ(ierr);
447       ierr = PetscMalloc1(onnz,&ojj);CHKERRQ(ierr);
448       ierr = PetscMalloc1(onnz,&oa);CHKERRQ(ierr);
449     } else if (reuse == MAT_REUSE_MATRIX) {
450       Mat_MPIAIJ *b = (Mat_MPIAIJ*)((*B)->data);
451       PetscInt   nr,hr = hypre_CSRMatrixNumRows(hoffd);
452       PetscBool  done;
453 
454       ierr = MatGetRowIJ(b->B,0,PETSC_FALSE,PETSC_FALSE,&nr,(const PetscInt**)&oii,(const PetscInt**)&ojj,&done);CHKERRQ(ierr);
455       if (nr != hr) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of local rows in offdiag part! %D != %D",nr,hr);
456       if (oii[nr] < onnz) SETERRQ2(PETSC_COMM_SELF,PETSC_ERR_USER,"Cannot reuse mat: invalid number of nonzeros in offdiag part! reuse %D hypre %D",oii[nr],onnz);
457       ierr = MatSeqAIJGetArray(b->B,&oa);CHKERRQ(ierr);
458     } else { /* MAT_INPLACE_MATRIX */
459       oii = (PetscInt*)hypre_CSRMatrixI(hoffd);
460       ojj = (PetscInt*)hypre_CSRMatrixJ(hoffd);
461       oa  = hypre_CSRMatrixData(hoffd);
462     }
463     ierr  = PetscMemcpy(oii,hypre_CSRMatrixI(hoffd),(m+1)*sizeof(PetscInt));CHKERRQ(ierr);
464     offdj = hypre_CSRMatrixJ(hoffd);
465     coffd = hypre_ParCSRMatrixColMapOffd(parcsr);
466     for (i=0; i<onnz; i++) ojj[i] = coffd[offdj[i]];
467     ierr = PetscMemcpy(oa,hypre_CSRMatrixData(hoffd),onnz*sizeof(PetscScalar));CHKERRQ(ierr);
468     iptr = ojj;
469     aptr = oa;
470     for (i=0; i<m; i++) {
471        PetscInt nc = oii[i+1]-oii[i];
472        ierr = PetscSortIntWithScalarArray(nc,iptr,aptr);CHKERRQ(ierr);
473        iptr += nc;
474        aptr += nc;
475     }
476     if (reuse == MAT_INITIAL_MATRIX) {
477       Mat_MPIAIJ *b;
478       Mat_SeqAIJ *d,*o;
479 
480       ierr = MatCreateMPIAIJWithSplitArrays(comm,m,n,PETSC_DECIDE,PETSC_DECIDE,dii,djj,da,oii,ojj,oa,B);CHKERRQ(ierr);
481       /* hack MPIAIJ */
482       b          = (Mat_MPIAIJ*)((*B)->data);
483       d          = (Mat_SeqAIJ*)b->A->data;
484       o          = (Mat_SeqAIJ*)b->B->data;
485       d->free_a  = PETSC_TRUE;
486       d->free_ij = PETSC_TRUE;
487       o->free_a  = PETSC_TRUE;
488       o->free_ij = PETSC_TRUE;
489     } else if (reuse == MAT_INPLACE_MATRIX) {
490       Mat T;
491       ierr = MatCreateMPIAIJWithSplitArrays(comm,m,n,PETSC_DECIDE,PETSC_DECIDE,dii,djj,da,oii,ojj,oa,&T);CHKERRQ(ierr);
492       hypre_CSRMatrixI(hdiag)    = NULL;
493       hypre_CSRMatrixJ(hdiag)    = NULL;
494       hypre_CSRMatrixData(hdiag) = NULL;
495       hypre_CSRMatrixI(hoffd)    = NULL;
496       hypre_CSRMatrixJ(hoffd)    = NULL;
497       hypre_CSRMatrixData(hoffd) = NULL;
498       ierr = MatHeaderReplace(A,&T);CHKERRQ(ierr);
499     }
500   } else {
501     oii  = NULL;
502     ojj  = NULL;
503     oa   = NULL;
504     if (reuse == MAT_INITIAL_MATRIX) {
505       Mat_SeqAIJ* b;
506       ierr = MatCreateSeqAIJWithArrays(comm,m,n,dii,djj,da,B);CHKERRQ(ierr);
507       /* hack SeqAIJ */
508       b          = (Mat_SeqAIJ*)((*B)->data);
509       b->free_a  = PETSC_TRUE;
510       b->free_ij = PETSC_TRUE;
511     } else if (reuse == MAT_INPLACE_MATRIX) {
512       Mat T;
513       ierr = MatCreateSeqAIJWithArrays(comm,m,n,dii,djj,da,&T);CHKERRQ(ierr);
514       hypre_CSRMatrixI(hdiag)    = NULL;
515       hypre_CSRMatrixJ(hdiag)    = NULL;
516       hypre_CSRMatrixData(hdiag) = NULL;
517       ierr = MatHeaderReplace(A,&T);CHKERRQ(ierr);
518     }
519   }
520 
521   /* we have to use hypre_Tfree to free the arrays */
522   if (reuse == MAT_INPLACE_MATRIX) {
523     void *ptrs[6] = {dii,djj,da,oii,ojj,oa};
524     const char *names[6] = {"_hypre_csr_dii",
525                             "_hypre_csr_djj",
526                             "_hypre_csr_da",
527                             "_hypre_csr_oii",
528                             "_hypre_csr_ojj",
529                             "_hypre_csr_oa"};
530     for (i=0; i<6; i++) {
531       PetscContainer c;
532 
533       ierr = PetscContainerCreate(comm,&c);CHKERRQ(ierr);
534       ierr = PetscContainerSetPointer(c,ptrs[i]);CHKERRQ(ierr);
535       ierr = PetscContainerSetUserDestroy(c,hypre_array_destroy);CHKERRQ(ierr);
536       ierr = PetscObjectCompose((PetscObject)(*B),names[i],(PetscObject)c);CHKERRQ(ierr);
537       ierr = PetscContainerDestroy(&c);CHKERRQ(ierr);
538     }
539   }
540   PetscFunctionReturn(0);
541 }
542 
543 #undef __FUNCT__
544 #define __FUNCT__ "MatAIJGetParCSR_Private"
545 static PetscErrorCode MatAIJGetParCSR_Private(Mat A, hypre_ParCSRMatrix **hA)
546 {
547   hypre_ParCSRMatrix *tA;
548   hypre_CSRMatrix    *hdiag,*hoffd;
549   Mat_SeqAIJ         *diag,*offd;
550   PetscInt           *garray,noffd,dnnz,onnz,*row_starts,*col_starts;
551   MPI_Comm           comm = PetscObjectComm((PetscObject)A);
552   PetscBool          ismpiaij,isseqaij;
553   PetscErrorCode     ierr;
554 
555   PetscFunctionBegin;
556   ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&ismpiaij);CHKERRQ(ierr);
557   ierr = PetscObjectTypeCompare((PetscObject)A,MATSEQAIJ,&isseqaij);CHKERRQ(ierr);
558   if (!ismpiaij && !isseqaij) SETERRQ1(comm,PETSC_ERR_SUP,"Unsupported type %s",((PetscObject)A)->type);
559   if (ismpiaij) {
560     Mat_MPIAIJ *a = (Mat_MPIAIJ*)(A->data);
561 
562     diag   = (Mat_SeqAIJ*)a->A->data;
563     offd   = (Mat_SeqAIJ*)a->B->data;
564     garray = a->garray;
565     noffd  = a->B->cmap->N;
566     dnnz   = diag->nz;
567     onnz   = offd->nz;
568   } else {
569     diag   = (Mat_SeqAIJ*)A->data;
570     offd   = NULL;
571     garray = NULL;
572     noffd  = 0;
573     dnnz   = diag->nz;
574     onnz   = 0;
575   }
576 
577   /* create a temporary ParCSR */
578   if (HYPRE_AssumedPartitionCheck()) {
579     PetscMPIInt myid;
580 
581     ierr       = MPI_Comm_rank(comm,&myid);CHKERRQ(ierr);
582     row_starts = A->rmap->range + myid;
583     col_starts = A->cmap->range + myid;
584   } else {
585     row_starts = A->rmap->range;
586     col_starts = A->cmap->range;
587   }
588   tA = hypre_ParCSRMatrixCreate(comm,A->rmap->N,A->cmap->N,(HYPRE_Int*)row_starts,(HYPRE_Int*)col_starts,noffd,dnnz,onnz);
589   hypre_ParCSRMatrixSetRowStartsOwner(tA,0);
590   hypre_ParCSRMatrixSetColStartsOwner(tA,0);
591 
592   /* set diagonal part */
593   hdiag = hypre_ParCSRMatrixDiag(tA);
594   hypre_CSRMatrixI(hdiag)           = (HYPRE_Int*)diag->i;
595   hypre_CSRMatrixJ(hdiag)           = (HYPRE_Int*)diag->j;
596   hypre_CSRMatrixData(hdiag)        = diag->a;
597   hypre_CSRMatrixNumNonzeros(hdiag) = diag->nz;
598   hypre_CSRMatrixSetRownnz(hdiag);
599   hypre_CSRMatrixSetDataOwner(hdiag,0);
600 
601   /* set offdiagonal part */
602   hoffd = hypre_ParCSRMatrixOffd(tA);
603   if (offd) {
604     hypre_CSRMatrixI(hoffd)           = (HYPRE_Int*)offd->i;
605     hypre_CSRMatrixJ(hoffd)           = (HYPRE_Int*)offd->j;
606     hypre_CSRMatrixData(hoffd)        = offd->a;
607     hypre_CSRMatrixNumNonzeros(hoffd) = offd->nz;
608     hypre_CSRMatrixSetRownnz(hoffd);
609     hypre_CSRMatrixSetDataOwner(hoffd,0);
610     hypre_ParCSRMatrixSetNumNonzeros(tA);
611     hypre_ParCSRMatrixColMapOffd(tA) = (HYPRE_Int*)garray;
612   }
613   *hA = tA;
614   PetscFunctionReturn(0);
615 }
616 
617 #undef __FUNCT__
618 #define __FUNCT__ "MatAIJRestoreParCSR_Private"
619 static PetscErrorCode MatAIJRestoreParCSR_Private(Mat A, hypre_ParCSRMatrix **hA)
620 {
621   hypre_CSRMatrix    *hdiag,*hoffd;
622 
623   PetscFunctionBegin;
624   hdiag = hypre_ParCSRMatrixDiag(*hA);
625   hoffd = hypre_ParCSRMatrixOffd(*hA);
626   /* set pointers to NULL before destroying tA */
627   hypre_CSRMatrixI(hdiag)           = NULL;
628   hypre_CSRMatrixJ(hdiag)           = NULL;
629   hypre_CSRMatrixData(hdiag)        = NULL;
630   hypre_CSRMatrixI(hoffd)           = NULL;
631   hypre_CSRMatrixJ(hoffd)           = NULL;
632   hypre_CSRMatrixData(hoffd)        = NULL;
633   hypre_ParCSRMatrixColMapOffd(*hA) = NULL;
634   hypre_ParCSRMatrixDestroy(*hA);
635   *hA = NULL;
636   PetscFunctionReturn(0);
637 }
638 
639 /* calls RAP from BoomerAMG:
640    the resulting ParCSR will not own the column and row starts */
641 #undef __FUNCT__
642 #define __FUNCT__ "MatHYPRE_ParCSR_RAP"
643 static PetscErrorCode MatHYPRE_ParCSR_RAP(hypre_ParCSRMatrix *hR, hypre_ParCSRMatrix *hA,
644                                           hypre_ParCSRMatrix *hP, hypre_ParCSRMatrix **hRAP)
645 {
646   PetscErrorCode ierr;
647   HYPRE_Int      P_owns_col_starts,R_owns_row_starts;
648 
649   PetscFunctionBegin;
650   P_owns_col_starts = hypre_ParCSRMatrixOwnsColStarts(hP);
651   R_owns_row_starts = hypre_ParCSRMatrixOwnsRowStarts(hR);
652   PetscStackCallStandard(hypre_BoomerAMGBuildCoarseOperator,(hR,hA,hP,hRAP));
653   PetscStackCallStandard(hypre_ParCSRMatrixSetNumNonzeros,(*hRAP));
654   /* hypre_BoomerAMGBuildCoarseOperator steals the col_starts from P and the row_starts from R */
655   hypre_ParCSRMatrixSetRowStartsOwner(*hRAP,0);
656   hypre_ParCSRMatrixSetColStartsOwner(*hRAP,0);
657   if (P_owns_col_starts) hypre_ParCSRMatrixSetColStartsOwner(hP,1);
658   if (R_owns_row_starts) hypre_ParCSRMatrixSetRowStartsOwner(hR,1);
659   PetscFunctionReturn(0);
660 }
661 
662 #undef __FUNCT__
663 #define __FUNCT__ "MatPtAPNumeric_AIJ_AIJ_wHYPRE"
664 static PetscErrorCode MatPtAPNumeric_AIJ_AIJ_wHYPRE(Mat A,Mat P,Mat C)
665 {
666   Mat                B;
667   hypre_ParCSRMatrix *hA,*hP,*hPtAP;
668   PetscErrorCode     ierr;
669 
670   PetscFunctionBegin;
671   ierr = MatAIJGetParCSR_Private(A,&hA);CHKERRQ(ierr);
672   ierr = MatAIJGetParCSR_Private(P,&hP);CHKERRQ(ierr);
673   ierr = MatHYPRE_ParCSR_RAP(hP,hA,hP,&hPtAP);CHKERRQ(ierr);
674   ierr = MatCreateFromParCSR(hPtAP,MATAIJ,PETSC_OWN_POINTER,&B);CHKERRQ(ierr);
675   ierr = MatHeaderMerge(C,&B);CHKERRQ(ierr);
676   ierr = MatAIJRestoreParCSR_Private(A,&hA);CHKERRQ(ierr);
677   ierr = MatAIJRestoreParCSR_Private(P,&hP);CHKERRQ(ierr);
678   PetscFunctionReturn(0);
679 }
680 
681 #undef __FUNCT__
682 #define __FUNCT__ "MatPtAPSymbolic_AIJ_AIJ_wHYPRE"
683 PETSC_INTERN PetscErrorCode MatPtAPSymbolic_AIJ_AIJ_wHYPRE(Mat A,Mat P,PetscReal fill,Mat *C)
684 {
685   PetscErrorCode     ierr;
686   PetscFunctionBegin;
687   ierr                   = MatCreate(PetscObjectComm((PetscObject)A),C);CHKERRQ(ierr);
688   ierr                   = MatSetType(*C,MATAIJ);CHKERRQ(ierr);
689   (*C)->ops->ptapnumeric = MatPtAPNumeric_AIJ_AIJ_wHYPRE;
690   PetscFunctionReturn(0);
691 }
692 
693 #undef __FUNCT__
694 #define __FUNCT__ "MatPtAP_AIJ_HYPRE"
695 static PetscErrorCode MatPtAP_AIJ_HYPRE(Mat A,Mat P,MatReuse scall,PetscReal fill,Mat *C)
696 {
697   Mat_HYPRE          *hP = (Mat_HYPRE*)P->data;
698   hypre_ParCSRMatrix *hA = NULL,*Pparcsr,*ptapparcsr;
699   HYPRE_Int          type;
700   MPI_Comm           comm = PetscObjectComm((PetscObject)A);
701   char               mtype[256];
702   PetscErrorCode     ierr;
703 
704   PetscFunctionBegin;
705   PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(hP->ij,&type));
706   if (type != HYPRE_PARCSR) SETERRQ(comm,PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported");
707   if (scall == MAT_REUSE_MATRIX) SETERRQ(comm,PETSC_ERR_SUP,"Unsupported MAT_REUSE_MATRIX");
708   ierr = PetscLogEventBegin(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr);
709   PetscStackCallStandard(HYPRE_IJMatrixGetObject,(hP->ij,(void**)&Pparcsr));
710 
711   /* It looks like we don't need to have the diagonal entries
712      ordered first in the rows of the diagonal part
713      for boomerAMGBuildCoarseOperator to work */
714   ierr = MatAIJGetParCSR_Private(A,&hA);CHKERRQ(ierr);
715   ierr = MatHYPRE_ParCSR_RAP(Pparcsr,hA,Pparcsr,&ptapparcsr);CHKERRQ(ierr);
716   ierr = MatAIJRestoreParCSR_Private(A,&hA);CHKERRQ(ierr);
717 
718   /* create C depending on mtype */
719   sprintf(mtype,MATAIJ);
720   ierr = PetscOptionsGetString(((PetscObject)A)->options,((PetscObject)A)->prefix,"-matptap_hypre_outtype",mtype,256,NULL);CHKERRQ(ierr);
721   ierr = MatCreateFromParCSR(ptapparcsr,mtype,PETSC_OWN_POINTER,C);CHKERRQ(ierr);
722   ierr = PetscLogEventEnd(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr);
723   PetscFunctionReturn(0);
724 }
725 
726 #undef __FUNCT__
727 #define __FUNCT__ "MatPtAP_HYPRE_HYPRE"
728 static PetscErrorCode MatPtAP_HYPRE_HYPRE(Mat A,Mat P,MatReuse scall,PetscReal fill,Mat *C)
729 {
730   hypre_ParCSRMatrix *Aparcsr,*Pparcsr,*ptapparcsr;
731   Mat_HYPRE          *hA = (Mat_HYPRE*)A->data, *hP = (Mat_HYPRE*)P->data;
732   HYPRE_Int          type;
733   PetscErrorCode     ierr;
734 
735   PetscFunctionBegin;
736   if (scall == MAT_REUSE_MATRIX) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Unsupported MAT_REUSE_MATRIX");
737   PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(hA->ij,&type));
738   if (type != HYPRE_PARCSR) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported");
739   PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(hP->ij,&type));
740   if (type != HYPRE_PARCSR) SETERRQ(PetscObjectComm((PetscObject)P),PETSC_ERR_SUP,"Only HYPRE_PARCSR is supported");
741   ierr = PetscLogEventBegin(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr);
742   PetscStackCallStandard(HYPRE_IJMatrixGetObject,(hA->ij,(void**)&Aparcsr));
743   PetscStackCallStandard(HYPRE_IJMatrixGetObject,(hP->ij,(void**)&Pparcsr));
744   ierr = MatHYPRE_ParCSR_RAP(Pparcsr,Aparcsr,Pparcsr,&ptapparcsr);CHKERRQ(ierr);
745   ierr = MatCreateFromParCSR(ptapparcsr,MATHYPRE,PETSC_OWN_POINTER,C);CHKERRQ(ierr);
746   ierr = PetscLogEventEnd(MAT_PtAPNumeric,A,P,0,0);CHKERRQ(ierr);
747   PetscFunctionReturn(0);
748 }
749 
750 #undef __FUNCT__
751 #define __FUNCT__ "MatMultTranspose_HYPRE"
752 static PetscErrorCode MatMultTranspose_HYPRE(Mat A, Vec x, Vec y)
753 {
754   PetscErrorCode ierr;
755 
756   PetscFunctionBegin;
757   ierr = MatHYPRE_MultKernel_Private(A,x,y,PETSC_TRUE);CHKERRQ(ierr);
758   PetscFunctionReturn(0);
759 }
760 
761 #undef __FUNCT__
762 #define __FUNCT__ "MatMult_HYPRE"
763 static PetscErrorCode MatMult_HYPRE(Mat A, Vec x, Vec y)
764 {
765   PetscErrorCode ierr;
766 
767   PetscFunctionBegin;
768   ierr = MatHYPRE_MultKernel_Private(A,x,y,PETSC_FALSE);CHKERRQ(ierr);
769   PetscFunctionReturn(0);
770 }
771 
772 #undef __FUNCT__
773 #define __FUNCT__ "MatHYPRE_MultKernel_Private"
774 static PetscErrorCode MatHYPRE_MultKernel_Private(Mat A, Vec x, Vec y, PetscBool trans)
775 {
776   Mat_HYPRE          *hA = (Mat_HYPRE*)A->data;
777   hypre_ParCSRMatrix *parcsr;
778   hypre_ParVector    *hx,*hy;
779   PetscScalar        *ax,*ay,*sax,*say;
780   PetscErrorCode     ierr;
781 
782   PetscFunctionBegin;
783   PetscStackCallStandard(HYPRE_IJMatrixGetObject,(hA->ij,(void**)&parcsr));
784   PetscStackCallStandard(HYPRE_IJVectorGetObject,(hA->x,(void**)&hx));
785   PetscStackCallStandard(HYPRE_IJVectorGetObject,(hA->b,(void**)&hy));
786   ierr = VecGetArrayRead(x,(const PetscScalar**)&ax);CHKERRQ(ierr);
787   ierr = VecGetArray(y,&ay);CHKERRQ(ierr);
788   if (trans) {
789     VecHYPRE_ParVectorReplacePointer(hA->x,ay,say);
790     VecHYPRE_ParVectorReplacePointer(hA->b,ax,sax);
791     hypre_ParCSRMatrixMatvecT(1.,parcsr,hy,0.,hx);
792     VecHYPRE_ParVectorReplacePointer(hA->x,say,ay);
793     VecHYPRE_ParVectorReplacePointer(hA->b,sax,ax);
794   } else {
795     VecHYPRE_ParVectorReplacePointer(hA->x,ax,sax);
796     VecHYPRE_ParVectorReplacePointer(hA->b,ay,say);
797     hypre_ParCSRMatrixMatvec(1.,parcsr,hx,0.,hy);
798     VecHYPRE_ParVectorReplacePointer(hA->x,sax,ax);
799     VecHYPRE_ParVectorReplacePointer(hA->b,say,ay);
800   }
801   ierr = VecRestoreArrayRead(x,(const PetscScalar**)&ax);CHKERRQ(ierr);
802   ierr = VecRestoreArray(y,&ay);CHKERRQ(ierr);
803   PetscFunctionReturn(0);
804 }
805 
806 #undef __FUNCT__
807 #define __FUNCT__ "MatDestroy_HYPRE"
808 static PetscErrorCode MatDestroy_HYPRE(Mat A)
809 {
810   Mat_HYPRE      *hA = (Mat_HYPRE*)A->data;
811   PetscErrorCode ierr;
812 
813   PetscFunctionBegin;
814   if (hA->x) PetscStackCallStandard(HYPRE_IJVectorDestroy,(hA->x));
815   if (hA->b) PetscStackCallStandard(HYPRE_IJVectorDestroy,(hA->b));
816   if (hA->ij) {
817     if (!hA->inner_free) hypre_IJMatrixObject(hA->ij) = NULL;
818     PetscStackCallStandard(HYPRE_IJMatrixDestroy,(hA->ij));
819   }
820   if (hA->comm) { ierr = MPI_Comm_free(&hA->comm);CHKERRQ(ierr); }
821   ierr = PetscObjectComposeFunction((PetscObject)A,"MatConvert_hypre_aij_C",NULL);CHKERRQ(ierr);
822   ierr = PetscObjectComposeFunction((PetscObject)A,"MatConvert_hypre_is_C",NULL);CHKERRQ(ierr);
823   ierr = PetscObjectComposeFunction((PetscObject)A,"MatPtAP_seqaij_hypre_C",NULL);CHKERRQ(ierr);
824   ierr = PetscObjectComposeFunction((PetscObject)A,"MatPtAP_mpiaij_hypre_C",NULL);CHKERRQ(ierr);
825   ierr = PetscObjectComposeFunction((PetscObject)A,"MatHYPRESetPreallocation_C",NULL);CHKERRQ(ierr);
826   ierr = PetscObjectComposeFunction((PetscObject)A,"MatHYPREGetParCSR_C",NULL);CHKERRQ(ierr);
827   ierr = PetscFree(A->data);CHKERRQ(ierr);
828   PetscFunctionReturn(0);
829 }
830 
831 #undef __FUNCT__
832 #define __FUNCT__ "MatSetUp_HYPRE"
833 static PetscErrorCode MatSetUp_HYPRE(Mat A)
834 {
835   PetscErrorCode ierr;
836 
837   PetscFunctionBegin;
838   ierr = MatHYPRESetPreallocation(A,PETSC_DEFAULT,NULL,PETSC_DEFAULT,NULL);CHKERRQ(ierr);
839   PetscFunctionReturn(0);
840 }
841 
842 #undef __FUNCT__
843 #define __FUNCT__ "MatAssemblyEnd_HYPRE"
844 static PetscErrorCode MatAssemblyEnd_HYPRE(Mat A, MatAssemblyType mode)
845 {
846   Mat_HYPRE          *hA = (Mat_HYPRE*)A->data;
847   Vec                x,b;
848   PetscErrorCode     ierr;
849 
850   PetscFunctionBegin;
851   if (mode == MAT_FLUSH_ASSEMBLY) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"MAT_FLUSH_ASSEMBLY currently not supported with MATHYPRE");
852   PetscStackCallStandard(HYPRE_IJMatrixAssemble,(hA->ij));
853   if (hA->x) PetscFunctionReturn(0);
854   ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr);
855   ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr);
856   ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),1,A->cmap->n,A->cmap->N,NULL,&x);CHKERRQ(ierr);
857   ierr = VecCreateMPIWithArray(PetscObjectComm((PetscObject)A),1,A->rmap->n,A->rmap->N,NULL,&b);CHKERRQ(ierr);
858   ierr = VecHYPRE_IJVectorCreate(x,&hA->x);CHKERRQ(ierr);
859   ierr = VecHYPRE_IJVectorCreate(b,&hA->b);CHKERRQ(ierr);
860   ierr = VecDestroy(&x);CHKERRQ(ierr);
861   ierr = VecDestroy(&b);CHKERRQ(ierr);
862   PetscFunctionReturn(0);
863 }
864 
865 #define MATHYPRE_SCRATCH 2048
866 
867 #undef __FUNCT__
868 #define __FUNCT__ "MatSetValues_HYPRE"
869 PetscErrorCode MatSetValues_HYPRE(Mat A, PetscInt nr, const PetscInt rows[], PetscInt nc, const PetscInt cols[], const PetscScalar v[], InsertMode ins)
870 {
871   Mat_HYPRE          *hA = (Mat_HYPRE*)A->data;
872   PetscScalar        *vals = (PetscScalar *)v;
873   PetscScalar        sscr[MATHYPRE_SCRATCH];
874   HYPRE_Int          cscr[2][MATHYPRE_SCRATCH];
875   HYPRE_Int          i,nzc;
876   PetscErrorCode     ierr;
877 
878   PetscFunctionBegin;
879   for (i=0,nzc=0;i<nc;i++) {
880     if (cols[i] >= 0) {
881       cscr[0][nzc  ] = cols[i];
882       cscr[1][nzc++] = i;
883     }
884   }
885   if (!nzc) PetscFunctionReturn(0);
886 
887   if (ins == ADD_VALUES) {
888     for (i=0;i<nr;i++) {
889       if (rows[i] >= 0) {
890         PetscInt j;
891         for (j=0;j<nzc;j++) sscr[j] = vals[cscr[1][j]];
892         PetscStackCallStandard(HYPRE_IJMatrixAddToValues,(hA->ij,1,&nzc,(HYPRE_Int*)(rows+i),cscr[0],sscr));
893       }
894       vals += nc;
895     }
896   } else { /* INSERT_VALUES */
897 #if defined(PETSC_USE_DEBUG)
898     /* Insert values cannot be used to insert offproc entries */
899     PetscInt rst,ren;
900     ierr = MatGetOwnershipRange(A,&rst,&ren);CHKERRQ(ierr);
901     for (i=0;i<nr;i++)
902       if (rows[i] >= 0 && (rows[i] < rst || rows[i] >= ren)) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_SUP,"Cannot use INSERT_VALUES for off-proc entries with MatHYPRE. Use ADD_VALUES instead");
903 #endif
904     for (i=0;i<nr;i++) {
905       if (rows[i] >= 0) {
906         PetscInt j;
907         for (j=0;j<nzc;j++) sscr[j] = vals[cscr[1][j]];
908         PetscStackCallStandard(HYPRE_IJMatrixSetValues,(hA->ij,1,&nzc,(HYPRE_Int*)(rows+i),cscr[0],sscr));
909       }
910       vals += nc;
911     }
912   }
913   PetscFunctionReturn(0);
914 }
915 
916 #undef __FUNCT__
917 #define __FUNCT__ "MatHYPRESetPreallocation_HYPRE"
918 static PetscErrorCode MatHYPRESetPreallocation_HYPRE(Mat A, PetscInt dnz, const PetscInt dnnz[], PetscInt onz, const PetscInt onnz[])
919 {
920   Mat_HYPRE          *hA = (Mat_HYPRE*)A->data;
921   HYPRE_Int          *hdnnz,*honnz;
922   PetscInt           i,rs,re,cs,ce,bs;
923   PetscMPIInt        size;
924   PetscErrorCode     ierr;
925 
926   PetscFunctionBegin;
927   ierr = MatGetBlockSize(A,&bs);CHKERRQ(ierr);
928   ierr = PetscLayoutSetUp(A->rmap);CHKERRQ(ierr);
929   ierr = PetscLayoutSetUp(A->cmap);CHKERRQ(ierr);
930   rs   = A->rmap->rstart;
931   re   = A->rmap->rend;
932   cs   = A->cmap->rstart;
933   ce   = A->cmap->rend;
934   if (!hA->ij) {
935     PetscStackCallStandard(HYPRE_IJMatrixCreate,(hA->comm,rs,re-1,cs,ce-1,&hA->ij));
936     PetscStackCallStandard(HYPRE_IJMatrixSetObjectType,(hA->ij,HYPRE_PARCSR));
937   } else {
938     HYPRE_Int hrs,hre,hcs,hce;
939     PetscStackCallStandard(HYPRE_IJMatrixGetLocalRange,(hA->ij,&hrs,&hre,&hcs,&hce));
940     if (hre-hrs+1 != re -rs) SETERRQ4(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Inconsistent local rows: IJMatrix [%D,%D), PETSc [%D,%d)",hrs,hre+1,rs,re);
941     if (hce-hcs+1 != ce -cs) SETERRQ4(PETSC_COMM_SELF,PETSC_ERR_PLIB,"Inconsistent local cols: IJMatrix [%D,%D), PETSc [%D,%d)",hcs,hce+1,cs,ce);
942   }
943   PetscStackCallStandard(HYPRE_IJMatrixInitialize,(hA->ij));
944 
945   if (dnz == PETSC_DEFAULT || dnz == PETSC_DECIDE) dnz = 10*bs;
946   if (onz == PETSC_DEFAULT || onz == PETSC_DECIDE) onz = 10*bs;
947 
948   if (!dnnz) {
949     ierr = PetscMalloc1(A->rmap->n,&hdnnz);CHKERRQ(ierr);
950     for (i=0;i<A->rmap->n;i++) hdnnz[i] = dnz;
951   } else {
952     hdnnz = (HYPRE_Int*)dnnz;
953   }
954   ierr = MPI_Comm_size(PetscObjectComm((PetscObject)A),&size);CHKERRQ(ierr);
955   if (size > 1) {
956     if (!onnz) {
957       ierr = PetscMalloc1(A->rmap->n,&honnz);CHKERRQ(ierr);
958       for (i=0;i<A->rmap->n;i++) honnz[i] = onz;
959     } else {
960       honnz = (HYPRE_Int*)onnz;
961     }
962     PetscStackCallStandard(HYPRE_IJMatrixSetDiagOffdSizes,(hA->ij,hdnnz,honnz));
963   } else {
964     honnz = NULL;
965     PetscStackCallStandard(HYPRE_IJMatrixSetRowSizes,(hA->ij,hdnnz));
966   }
967   if (!dnnz) {
968     ierr = PetscFree(hdnnz);CHKERRQ(ierr);
969   }
970   if (!onnz && honnz) {
971     ierr = PetscFree(honnz);CHKERRQ(ierr);
972   }
973   A->preallocated = PETSC_TRUE;
974 
975   /* SetDiagOffdSizes sets hypre_AuxParCSRMatrixNeedAux(aux_matrix) = 0 */
976   {
977     hypre_AuxParCSRMatrix *aux_matrix;
978     aux_matrix = (hypre_AuxParCSRMatrix*)hypre_IJMatrixTranslator(hA->ij);
979     hypre_AuxParCSRMatrixNeedAux(aux_matrix) = 1;
980   }
981   PetscFunctionReturn(0);
982 }
983 
984 /*@C
985    MatHYPRESetPreallocation - Preallocates memory for a sparse parallel matrix in HYPRE IJ format
986 
987    Collective on Mat
988 
989    Input Parameters:
990 +  A - the matrix
991 .  dnz  - number of nonzeros per row in DIAGONAL portion of local submatrix
992           (same value is used for all local rows)
993 .  dnnz - array containing the number of nonzeros in the various rows of the
994           DIAGONAL portion of the local submatrix (possibly different for each row)
995           or NULL (PETSC_NULL_INTEGER in Fortran), if d_nz is used to specify the nonzero structure.
996           The size of this array is equal to the number of local rows, i.e 'm'.
997           For matrices that will be factored, you must leave room for (and set)
998           the diagonal entry even if it is zero.
999 .  onz  - number of nonzeros per row in the OFF-DIAGONAL portion of local
1000           submatrix (same value is used for all local rows).
1001 -  onnz - array containing the number of nonzeros in the various rows of the
1002           OFF-DIAGONAL portion of the local submatrix (possibly different for
1003           each row) or NULL (PETSC_NULL_INTEGER in Fortran), if o_nz is used to specify the nonzero
1004           structure. The size of this array is equal to the number
1005           of local rows, i.e 'm'.
1006 
1007    Notes: If the *nnz parameter is given then the *nz parameter is ignored; for sequential matrices, onz and onnz are ignored.
1008 
1009    Level: intermediate
1010 
1011 .keywords: matrix, aij, compressed row, sparse, parallel
1012 
1013 .seealso: MatCreate(), MatMPIAIJSetPreallocation, MATHYPRE
1014 @*/
1015 #undef __FUNCT__
1016 #define __FUNCT__ "MatHYPRESetPreallocation"
1017 PetscErrorCode MatHYPRESetPreallocation(Mat A, PetscInt dnz, const PetscInt dnnz[], PetscInt onz, const PetscInt onnz[])
1018 {
1019   PetscErrorCode ierr;
1020 
1021   PetscFunctionBegin;
1022   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
1023   PetscValidType(A,1);
1024   ierr = PetscTryMethod(A,"MatHYPRESetPreallocation_C",(Mat,PetscInt,const PetscInt[],PetscInt,const PetscInt[]),(A,dnz,dnnz,onz,onnz));CHKERRQ(ierr);
1025   PetscFunctionReturn(0);
1026 }
1027 
1028 /*
1029    MatCreateFromParCSR - Creates a matrix from a hypre_ParCSRMatrix
1030 
1031    Collective
1032 
1033    Input Parameters:
1034 +  vparcsr  - the pointer to the hypre_ParCSRMatrix
1035 .  mtype    - matrix type to be created. Currently MATAIJ, MATIS and MATHYPRE are supported.
1036 -  copymode - PETSc copying options
1037 
1038    Output Parameter:
1039 .  A  - the matrix
1040 
1041    Level: intermediate
1042 
1043 .seealso: MatHYPRE, PetscCopyMode
1044 */
1045 #undef __FUNCT__
1046 #define __FUNCT__ "MatCreateFromParCSR"
1047 PETSC_EXTERN PetscErrorCode MatCreateFromParCSR(hypre_ParCSRMatrix *vparcsr, MatType mtype, PetscCopyMode copymode, Mat* A)
1048 {
1049   Mat                   T;
1050   Mat_HYPRE             *hA;
1051   hypre_ParCSRMatrix    *parcsr;
1052   MPI_Comm              comm;
1053   PetscInt              rstart,rend,cstart,cend,M,N;
1054   PetscBool             isseqaij,ismpiaij,isaij,ishyp,isis;
1055   PetscErrorCode        ierr;
1056 
1057   PetscFunctionBegin;
1058   parcsr = (hypre_ParCSRMatrix *)vparcsr;
1059   comm   = hypre_ParCSRMatrixComm(parcsr);
1060   ierr   = PetscStrcmp(mtype,MATSEQAIJ,&isseqaij);CHKERRQ(ierr);
1061   ierr   = PetscStrcmp(mtype,MATMPIAIJ,&ismpiaij);CHKERRQ(ierr);
1062   ierr   = PetscStrcmp(mtype,MATAIJ,&isaij);CHKERRQ(ierr);
1063   ierr   = PetscStrcmp(mtype,MATHYPRE,&ishyp);CHKERRQ(ierr);
1064   ierr   = PetscStrcmp(mtype,MATIS,&isis);CHKERRQ(ierr);
1065   isaij  = (PetscBool)(isseqaij || ismpiaij || isaij);
1066   if (!isaij && !ishyp && !isis) SETERRQ6(comm,PETSC_ERR_SUP,"Unsupported MatType %s! Supported types are %s, %s, %s, %s, and %s",mtype,MATAIJ,MATSEQAIJ,MATMPIAIJ,MATIS,MATHYPRE);
1067   if (ishyp && copymode == PETSC_COPY_VALUES) SETERRQ(comm,PETSC_ERR_SUP,"Unsupported copymode PETSC_COPY_VALUES");
1068 
1069   /* access ParCSRMatrix */
1070   rstart = hypre_ParCSRMatrixFirstRowIndex(parcsr);
1071   rend   = hypre_ParCSRMatrixLastRowIndex(parcsr);
1072   cstart = hypre_ParCSRMatrixFirstColDiag(parcsr);
1073   cend   = hypre_ParCSRMatrixLastColDiag(parcsr);
1074   M      = hypre_ParCSRMatrixGlobalNumRows(parcsr);
1075   N      = hypre_ParCSRMatrixGlobalNumCols(parcsr);
1076 
1077   /* fix for empty local rows/columns */
1078   if (rend < rstart) rend = rstart;
1079   if (cend < cstart) cend = cstart;
1080 
1081   /* create PETSc matrix with MatHYPRE */
1082   ierr = MatCreate(comm,&T);CHKERRQ(ierr);
1083   ierr = MatSetSizes(T,rend-rstart+1,cend-cstart+1,M,N);CHKERRQ(ierr);
1084   ierr = MatSetType(T,MATHYPRE);CHKERRQ(ierr);
1085   hA   = (Mat_HYPRE*)(T->data);
1086 
1087   /* create HYPRE_IJMatrix */
1088   PetscStackCallStandard(HYPRE_IJMatrixCreate,(hA->comm,rstart,rend-1,cstart,cend-1,&hA->ij));
1089 
1090   /* set ParCSR object */
1091   PetscStackCallStandard(HYPRE_IJMatrixSetObjectType,(hA->ij,HYPRE_PARCSR));
1092   hypre_IJMatrixObject(hA->ij) = parcsr;
1093   T->preallocated = PETSC_TRUE;
1094 
1095   /* set assembled flag */
1096   hypre_IJMatrixAssembleFlag(hA->ij) = 1;
1097   PetscStackCallStandard(HYPRE_IJMatrixInitialize,(hA->ij));
1098   if (ishyp) {
1099     PetscMPIInt myid = 0;
1100 
1101     /* make sure we always have row_starts and col_starts available */
1102     if (HYPRE_AssumedPartitionCheck()) {
1103       ierr = MPI_Comm_rank(comm,&myid);CHKERRQ(ierr);
1104     }
1105     if (!hypre_ParCSRMatrixOwnsColStarts(parcsr)) {
1106       PetscLayout map;
1107 
1108       ierr = MatGetLayouts(T,NULL,&map);CHKERRQ(ierr);
1109       ierr = PetscLayoutSetUp(map);CHKERRQ(ierr);
1110       hypre_ParCSRMatrixColStarts(parcsr) = map->range + myid;
1111     }
1112     if (!hypre_ParCSRMatrixOwnsRowStarts(parcsr)) {
1113       PetscLayout map;
1114 
1115       ierr = MatGetLayouts(T,&map,NULL);CHKERRQ(ierr);
1116       ierr = PetscLayoutSetUp(map);CHKERRQ(ierr);
1117       hypre_ParCSRMatrixRowStarts(parcsr) = map->range + myid;
1118     }
1119     /* prevent from freeing the pointer */
1120     if (copymode == PETSC_USE_POINTER) hA->inner_free = PETSC_FALSE;
1121     *A = T;
1122     ierr = MatAssemblyBegin(*A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1123     ierr = MatAssemblyEnd(*A,MAT_FINAL_ASSEMBLY);CHKERRQ(ierr);
1124   } else if (isaij) {
1125     if (copymode != PETSC_OWN_POINTER) {
1126       /* prevent from freeing the pointer */
1127       hA->inner_free = PETSC_FALSE;
1128       ierr = MatConvert_HYPRE_AIJ(T,MATAIJ,MAT_INITIAL_MATRIX,A);CHKERRQ(ierr);
1129       ierr = MatDestroy(&T);CHKERRQ(ierr);
1130     } else { /* AIJ return type with PETSC_OWN_POINTER */
1131       ierr = MatConvert_HYPRE_AIJ(T,MATAIJ,MAT_INPLACE_MATRIX,&T);CHKERRQ(ierr);
1132       *A   = T;
1133     }
1134   } else if (isis) {
1135     ierr = MatConvert_HYPRE_IS(T,MATIS,MAT_INITIAL_MATRIX,A);CHKERRQ(ierr);
1136     if (copymode != PETSC_OWN_POINTER) hA->inner_free = PETSC_FALSE;
1137     ierr = MatDestroy(&T);CHKERRQ(ierr);
1138   }
1139   PetscFunctionReturn(0);
1140 }
1141 
1142 #undef __FUNCT__
1143 #define __FUNCT__ "MatHYPREGetParCSR_HYPRE"
1144 PetscErrorCode MatHYPREGetParCSR_HYPRE(Mat A, hypre_ParCSRMatrix **parcsr)
1145 {
1146   Mat_HYPRE*            hA = (Mat_HYPRE*)A->data;
1147   HYPRE_Int             type;
1148   PetscErrorCode        ierr;
1149 
1150   PetscFunctionBegin;
1151   if (!hA->ij) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_PLIB,"HYPRE_IJMatrix not present");
1152   PetscStackCallStandard(HYPRE_IJMatrixGetObjectType,(hA->ij,&type));
1153   if (type != HYPRE_PARCSR) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"HYPRE_IJMatrix is not of type HYPRE_PARCSR");
1154   PetscStackCallStandard(HYPRE_IJMatrixGetObject,(hA->ij,(void**)parcsr));
1155   PetscFunctionReturn(0);
1156 }
1157 
1158 /*
1159    MatHYPREGetParCSR - Gets the pointer to the ParCSR matrix
1160 
1161    Not collective
1162 
1163    Input Parameters:
1164 +  A  - the MATHYPRE object
1165 
1166    Output Parameter:
1167 .  parcsr  - the pointer to the hypre_ParCSRMatrix
1168 
1169    Level: intermediate
1170 
1171 .seealso: MatHYPRE, PetscCopyMode
1172 */
1173 #undef __FUNCT__
1174 #define __FUNCT__ "MatHYPREGetParCSR"
1175 PetscErrorCode MatHYPREGetParCSR(Mat A, hypre_ParCSRMatrix **parcsr)
1176 {
1177   PetscErrorCode ierr;
1178 
1179   PetscFunctionBegin;
1180   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
1181   PetscValidType(A,1);
1182   ierr = PetscUseMethod(A,"MatHYPREGetParCSR_C",(Mat,hypre_ParCSRMatrix**),(A,parcsr));CHKERRQ(ierr);
1183   PetscFunctionReturn(0);
1184 }
1185 
1186 #undef __FUNCT__
1187 #define __FUNCT__ "MatCreate_HYPRE"
1188 PETSC_EXTERN PetscErrorCode MatCreate_HYPRE(Mat B)
1189 {
1190   Mat_HYPRE      *hB;
1191   PetscErrorCode ierr;
1192 
1193   PetscFunctionBegin;
1194   ierr           = PetscNewLog(B,&hB);CHKERRQ(ierr);
1195   hB->inner_free = PETSC_TRUE;
1196 
1197   B->data       = (void*)hB;
1198   B->rmap->bs   = 1;
1199   B->assembled  = PETSC_FALSE;
1200 
1201   B->ops->mult          = MatMult_HYPRE;
1202   B->ops->multtranspose = MatMultTranspose_HYPRE;
1203   B->ops->setup         = MatSetUp_HYPRE;
1204   B->ops->destroy       = MatDestroy_HYPRE;
1205   B->ops->assemblyend   = MatAssemblyEnd_HYPRE;
1206   B->ops->ptap          = MatPtAP_HYPRE_HYPRE;
1207   B->ops->setvalues     = MatSetValues_HYPRE;
1208 
1209   ierr = MPI_Comm_dup(PetscObjectComm((PetscObject)B),&hB->comm);CHKERRQ(ierr);
1210   ierr = PetscObjectChangeTypeName((PetscObject)B,MATHYPRE);CHKERRQ(ierr);
1211   ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_hypre_aij_C",MatConvert_HYPRE_AIJ);CHKERRQ(ierr);
1212   ierr = PetscObjectComposeFunction((PetscObject)B,"MatConvert_hypre_is_C",MatConvert_HYPRE_IS);CHKERRQ(ierr);
1213   ierr = PetscObjectComposeFunction((PetscObject)B,"MatPtAP_seqaij_hypre_C",MatPtAP_AIJ_HYPRE);CHKERRQ(ierr);
1214   ierr = PetscObjectComposeFunction((PetscObject)B,"MatPtAP_mpiaij_hypre_C",MatPtAP_AIJ_HYPRE);CHKERRQ(ierr);
1215   ierr = PetscObjectComposeFunction((PetscObject)B,"MatHYPRESetPreallocation_C",MatHYPRESetPreallocation_HYPRE);CHKERRQ(ierr);
1216   ierr = PetscObjectComposeFunction((PetscObject)B,"MatHYPREGetParCSR_C",MatHYPREGetParCSR_HYPRE);CHKERRQ(ierr);
1217   PetscFunctionReturn(0);
1218 }
1219 
1220 #undef __FUNCT__
1221 #define __FUNCT__ "hypre_array_destroy"
1222 static PetscErrorCode hypre_array_destroy(void *ptr)
1223 {
1224    PetscFunctionBegin;
1225    hypre_TFree(ptr);
1226    PetscFunctionReturn(0);
1227 }
1228 
1229 #if 0
1230 /*
1231     Does NOT copy the data over, instead uses DIRECTLY the pointers from the PETSc MPIAIJ format
1232 
1233     This is UNFINISHED and does NOT work! The problem is that hypre puts the diagonal entry first
1234     which will corrupt the PETSc data structure if we did this. Need a work around to this problem.
1235 */
1236 #include <_hypre_IJ_mv.h>
1237 #include <HYPRE_IJ_mv.h>
1238 
1239 #undef __FUNCT__
1240 #define __FUNCT__ "MatHYPRE_IJMatrixLink"
1241 PetscErrorCode MatHYPRE_IJMatrixLink(Mat A, HYPRE_IJMatrix *ij)
1242 {
1243   PetscErrorCode        ierr;
1244   PetscInt              rstart,rend,cstart,cend;
1245   PetscBool             flg;
1246   hypre_AuxParCSRMatrix *aux_matrix;
1247 
1248   PetscFunctionBegin;
1249   PetscValidHeaderSpecific(A,MAT_CLASSID,1);
1250   PetscValidType(A,1);
1251   PetscValidPointer(ij,2);
1252   ierr = PetscObjectTypeCompare((PetscObject)A,MATMPIAIJ,&flg);CHKERRQ(ierr);
1253   if (!flg) SETERRQ(PetscObjectComm((PetscObject)A),PETSC_ERR_SUP,"Can only use with PETSc MPIAIJ matrices");
1254   ierr = MatSetUp(A);CHKERRQ(ierr);
1255 
1256   ierr   = PetscLogEventBegin(MAT_Convert,A,0,0,0);CHKERRQ(ierr);
1257   rstart = A->rmap->rstart;
1258   rend   = A->rmap->rend;
1259   cstart = A->cmap->rstart;
1260   cend   = A->cmap->rend;
1261   PetscStackCallStandard(HYPRE_IJMatrixCreate,(PetscObjectComm((PetscObject)A),rstart,rend-1,cstart,cend-1,ij));
1262   PetscStackCallStandard(HYPRE_IJMatrixSetObjectType,(*ij,HYPRE_PARCSR));
1263 
1264   PetscStackCallStandard(HYPRE_IJMatrixInitialize,(*ij));
1265   PetscStackCall("hypre_IJMatrixTranslator",aux_matrix = (hypre_AuxParCSRMatrix*)hypre_IJMatrixTranslator(*ij));
1266 
1267   hypre_AuxParCSRMatrixNeedAux(aux_matrix) = 0;
1268 
1269   /* this is the Hack part where we monkey directly with the hypre datastructures */
1270 
1271   PetscStackCallStandard(HYPRE_IJMatrixAssemble,(*ij));
1272   ierr = PetscLogEventEnd(MAT_Convert,A,0,0,0);CHKERRQ(ierr);
1273   PetscFunctionReturn(0);
1274 }
1275 #endif
1276